Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    67.2     64        0    7.6
Qui1     Qui    34.7     72        0    7.0
Qui2     Qui    90.2     51        0    7.9
Qui3     Qui    83.7     86        0    8.7
Qui4     Qui    19.6     51        0    7.1
Rio1     Rio     4.9    102        0    9.7
Rio2     Rio     0.0     50        0    5.8
Rio3     Rio     0.0     48        0    7.2
Rio4     Rio     0.0     63        0    8.9