Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 0
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     10        0   10.0
Qui1     Qui     0.0     12        0   15.0
Qui2     Qui     0.0     25        0   27.0
Qui3     Qui     5.3     19        0   19.0
Qui4     Qui     0.0     11        0   13.0
Rio1     Rio    45.0     20        0   22.5
Rio2     Rio     0.0     11        0   11.0
Rio3     Rio    50.0     16        0   16.5
Rio4     Rio    18.2     22        0   24.5