Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

25 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.3     37        0    5.5
Qui1     Qui    31.4     51        0    5.1
Qui2     Qui    84.6     13        0    2.7
Qui3     Qui    53.2     62        0    6.2
Qui4     Qui    64.3     28        0    4.8
Rio1     Rio    80.6     36        0    6.3
Rio2     Rio    77.1     35        0    5.7
Rio3     Rio    80.0     25        0    4.3
Rio4     Rio    92.0     88        0    7.1