Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 73
  seen in >= 2 oysters: 12
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 16 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    64.0    150        3   12.0
Qui1     Qui    41.2    160        1   12.1
Qui2     Qui     0.0     57        1    5.6
Qui3     Qui    40.7    123        2    9.7
Qui4     Qui    37.7    106        1    7.9
Rio1     Rio    61.1    229        1   16.2
Rio2     Rio    69.7    152        0   10.5
Rio3     Rio    66.4    140        2   10.1
Rio4     Rio    69.4    183        1   10.8