Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    67.9     28        0    9.0
Qui1     Qui    50.0     20        0    7.4
Qui2     Qui    71.4     42        0    6.3
Qui3     Qui    41.2     17        0    7.7
Qui4     Qui    57.1     70        0    8.6
Rio1     Rio    84.6     52        0   11.3
Rio2     Rio    79.1     43        0    6.5
Rio3     Rio    72.2     36        1    5.8
Rio4     Rio    80.0     30        0    6.2