Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 66
  seen in >= 2 oysters: 21
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    43.6     55        0    9.8
Qui1     Qui    50.0     24        0    7.3
Qui2     Qui    37.1     35        0    7.1
Qui3     Qui    50.0     48        0    7.6
Qui4     Qui    43.2     37        0    8.8
Rio1     Rio    53.3     30        0    5.3
Rio2     Rio    59.1     44        0    6.1
Rio3     Rio    54.2     24        0    4.7
Rio4     Rio    73.1     26        0    5.4