Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 10
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    37.0     27        0    7.2
Qui1     Qui    42.1     38        0    7.6
Qui2     Qui    41.9     74        0   12.7
Qui3     Qui    62.5     40        0   12.8
Qui4     Qui    56.1     41        0    7.8
Rio1     Rio    62.7     51        0   10.0
Rio2     Rio    68.9     45        0    9.9
Rio3     Rio    43.8     16        0    4.5
Rio4     Rio    76.1     46        0   10.5