pos ref alt in_target n_oysters_with_alt alt_freq_Pum alt_freq_Qui alt_freq_Rio pop_differentiated cpg_destroying Pum1 Qui1 Qui2 Qui3 Qui4 Rio1 Rio2 Rio3 Rio4 75977005 C A True 2 0.353 0.5 False False 1.00/1 0.50/4 0.00/4 0.43/7 0.50/2 0.00/1 0.50/2 0.67/3 75977006 C A True 1 0.118 0.167 False False 0.00/1 0.50/4 0.00/4 0.00/7 0.00/2 0.00/1 0.50/2 0.00/3 75977008 C T True 2 0.176 0.167 False True 0.00/1 0.00/4 0.25/4 0.29/7 0.00/2 1.00/1 0.00/2 0.00/3 75977018 A G True 1 0.0 0.028 0.0 False False 0.00/6 0.00/11 0.00/6 0.00/15 0.25/4 0.00/10 0.00/8 0.00/3 0.00/8 75977034 C T True 1 0.3 0.6 False True 1.00/1 0.33/3 0.00/2 0.50/4 0.00/1 0.00/1 0.50/2 1.00/2 75977043 T C True 3 0.25 0.28 0.158 False False 0.25/4 0.12/8 0.33/3 0.50/10 0.00/4 0.14/7 0.17/6 0.00/2 0.25/4 75977078 T A True 1 0.1 0.0 False False 0.00/1 0.25/4 0.00/1 0.00/2 0.00/3 0.00/4 0.00/3 0.00/2 75977104 A G True 1 0.0 0.071 False False 0.00/3 0.00/3 0.00/2 0.00/2 0.00/3 0.00/3 0.00/4 0.25/4 75977105 T G True 1 0.0 0.071 False False 0.00/3 0.00/3 0.00/2 0.00/2 0.00/3 0.00/3 0.00/4 0.25/4 75977124 T A True 1 0.25 0.0 0.0 False False 0.25/4 0.00/3 0.00/1 0.00/3 0.00/2 0.00/4 0.00/4 0.00/4 0.00/5 75977183 G C True 1 0.0 0.067 False False 0.00/2 0.00/1 0.00/1 0.00/3 0.00/3 0.00/5 0.00/3 0.00/3 0.25/4 75977208 T G True 1 0.0 0.053 False False 0.00/3 0.00/5 0.00/4 0.00/5 0.00/5 0.00/6 0.25/4 0.00/4 0.00/5 75977215 A T True 3 0.105 0.2 False False 0.67/3 0.00/5 0.00/4 0.00/4 0.33/6 0.33/6 0.00/5 0.25/4 0.20/5 75977220 A C True 1 0.0 0.0 0.1 False False 0.00/4 0.00/5 0.00/4 0.00/4 0.00/5 0.00/7 0.00/4 0.25/4 0.20/5 75977221 T C True 1 0.0 0.0 0.05 False False 0.00/4 0.00/5 0.00/4 0.00/4 0.00/6 0.00/7 0.00/4 0.25/4 0.00/5 75977224 A C True 1 0.0 0.0 0.05 False False 0.00/4 0.00/4 0.00/4 0.00/5 0.00/5 0.00/8 0.00/4 0.25/4 0.00/4 75977231 T G True 1 0.0 0.05 False False 0.00/3 0.00/4 0.00/4 0.00/5 0.00/6 0.00/7 0.00/5 0.25/4 0.00/4 75977250 G A True 1 0.083 0.154 False True 1.00/1 0.00/3 0.00/2 0.00/3 0.25/4 0.20/5 0.00/4 1.00/1 0.00/3 75977260 T A True 1 0.0 0.053 False False 0.00/3 0.00/4 0.00/4 0.00/8 0.00/6 0.00/6 0.00/5 0.00/4 0.25/4 75977291 T A True 1 0.25 0.0 0.0 False False 0.25/4 0.00/3 0.00/4 0.00/8 0.00/6 0.00/6 0.00/5 0.00/3 0.00/3 75977301 A T True 1 0.25 0.0 0.0 False False 0.25/4 0.00/5 0.00/4 0.00/8 0.00/6 0.00/6 0.00/6 0.00/4 0.00/4 75977302 A T True 1 0.0 0.0 0.048 False False 0.00/4 0.00/5 0.00/4 0.00/8 0.00/7 0.00/6 0.00/7 0.25/4 0.00/4 75977311 A T True 1 0.0 0.053 False False 0.00/3 0.00/5 0.00/4 0.00/8 0.00/7 0.00/4 0.00/7 0.25/4 0.00/4 75977323 A T True 1 0.0 0.059 False False 0.00/3 0.00/5 0.00/3 0.00/7 0.00/6 0.25/4 0.00/7 0.00/3 0.00/3 75977362 G T True 1 0.077 0.0 False False 0.00/2 0.00/4 0.00/2 0.25/4 0.00/3 0.00/5 0.00/5 0.00/2 0.00/3 75977363 G C True 1 0.077 0.0 False False 0.00/2 0.00/4 0.00/2 0.25/4 0.00/3 0.00/5 0.00/5 0.00/2 0.00/3 75977434 T C True 1 0.077 0.083 False False 0.00/2 0.20/5 0.00/1 0.00/3 0.00/4 0.00/5 0.25/4 0.00/3 75977435 T C True 1 0.0 0.091 False False 0.33/3 0.00/5 0.00/1 0.00/3 0.00/4 0.00/5 0.25/4 0.00/2 75977451 T C True 1 0.0 0.125 False False 0.00/1 0.00/4 0.00/1 0.00/2 0.00/1 0.25/4 0.00/3 0.00/1 75977454 A T True 0 1.0 0.571 False False 1.00/2 1.00/3 1.00/1 1.00/2 1.00/1 1.00/3 0.33/3 0.00/1 75977456 A T True 0 0.833 0.5 False False 0.50/2 1.00/2 1.00/1 0.50/2 1.00/1 0.67/3 0.33/3 75977458 T G True 0 0.833 0.286 False False 0.50/2 1.00/2 1.00/1 0.50/2 1.00/1 0.33/3 0.33/3 0.00/1 75977462 T A True 0 0.0 0.333 False False 0.00/2 0.00/2 0.00/1 0.00/1 0.00/1 0.00/3 0.50/2 1.00/1 75977464 G A True 0 1.0 False True 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 75977468 A T True 0 1.0 0.5 False False 0.50/2 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 0.00/1 75977469 T A True 0 0.0 0.25 False False 0.50/2 0.00/2 0.00/1 0.00/1 0.00/1 0.50/2 0.00/1 0.00/1 75977470 N G True 0 1.0 0.5 False False 0.50/2 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 0.00/1 75977471 N A True 0 1.0 0.5 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 0.00/1 75977472 N T True 0 1.0 0.75 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 1.00/1 75977473 N T True 0 1.0 1.0 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 1.00/2 1.00/1 1.00/1 75977474 N G True 0 1.0 0.5 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 0.00/1 75977475 N T True 0 1.0 0.5 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 0.00/1 75977476 N G True 0 1.0 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/1 0.50/2 1.00/1 75977477 N A True 0 1.0 False False 1.00/1 1.00/2 1.00/1 1.00/1 1.00/2 0.00/1 75977563 N A True 0 1.0 False False 1.00/1 1.00/2 1.00/2 1.00/1 1.00/1 75977564 N A True 0 0.8 0.75 False False 1.00/1 1.00/2 0.50/2 1.00/1 1.00/1 0.50/2 75977565 N T True 0 0.8 1.0 False False 1.00/1 1.00/2 0.50/2 1.00/1 1.00/1 1.00/2 75977566 N A True 0 0.8 0.6 False False 1.00/1 1.00/2 0.50/2 0.50/2 1.00/1 0.50/2 75977567 N A True 0 0.833 1.0 False False 1.00/1 1.00/2 0.50/2 1.00/1 1.00/2 1.00/1 1.00/2 75977568 N A True 0 1.0 0.6 False False 1.00/1 1.00/2 1.00/2 1.00/1 0.50/2 1.00/1 0.50/2 75977569 N T True 0 0.833 1.0 False False 1.00/1 1.00/2 0.50/2 1.00/1 1.00/2 1.00/1 1.00/2 75977600 A G True 1 0.077 0.0 False False 0.00/2 0.00/3 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977601 A C True 1 0.077 0.0 False False 0.00/2 0.00/3 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977603 T C True 1 0.077 0.0 False False 0.00/2 0.00/3 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977607 A G True 1 0.071 0.0 False False 0.00/2 0.00/4 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977608 A G True 1 0.071 0.0 False False 0.00/2 0.00/4 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977611 A G True 1 0.071 0.0 False False 0.00/2 0.00/4 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977612 A G True 1 0.071 0.0 False False 0.00/2 0.00/4 0.00/4 0.00/2 0.25/4 0.00/3 0.00/4 0.00/2 0.00/1 75977613 T G True 1 0.071 0.0 False False 0.00/2 0.00/4 0.00/4 0.00/2 0.25/4 0.00/4 0.00/4 0.00/2 0.00/1 75977616 T A True 1 0.067 0.0 False False 0.00/2 0.00/4 0.00/5 0.00/2 0.25/4 0.00/4 0.00/5 0.00/2 0.00/1 75977917 C T True 2 0.5 0.0 0.211 False True 0.50/4 0.00/4 0.00/3 0.00/5 0.00/5 0.20/5 0.38/8 0.00/2 0.00/4 75977967 A G True 1 0.353 0.0 0.146 False False 0.35/17 0.00/11 0.00/10 0.00/10 0.00/9 0.22/18 0.21/14 0.00/7 0.00/9