Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 3
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     4.2     24        0   30.5
Qui1     Qui   100.0      3        0    5.0
Qui2     Qui   100.0      6        0    6.5
Qui3     Qui   100.0      7        0    7.5
Qui4     Qui   100.0      3        0    7.0
Rio1     Rio    21.7     23        0   28.0
Rio2     Rio    14.3     28        0   33.0
Rio3     Rio   100.0      4        0    4.5
Rio4     Rio    38.1     21        0   25.5