Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 73
  seen in >= 2 oysters: 22
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

9 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    81.1     37        0    7.8
Qui1     Qui    81.8     33        0    7.8
Qui2     Qui    87.8     49        0    6.8
Qui3     Qui    87.9     33        0    4.8
Qui4     Qui    84.8     46        0    5.8
Rio1     Rio    53.0     66        0    7.2
Rio2     Rio    60.7     28        0    5.1
Rio3     Rio    65.2     23        0    5.1
Rio4     Rio    59.1     22        0    7.1