Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

32 CpGs in target; 22 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    84.3    140        0   10.7
Qui1     Qui    44.2    113        0    8.4
Qui2     Qui    50.7    134        0    7.4
Qui3     Qui    56.6    173        0   10.9
Qui4     Qui    98.5    136        1    7.8
Rio1     Rio     5.5    181        0   11.0
Rio2     Rio     0.0    183        1    8.2
Rio3     Rio     0.0     55        0    5.4
Rio4     Rio     0.0    118        0    8.8