Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    13.8     29        0   42.0
Qui1     Qui     0.0     10        0   16.0
Qui2     Qui     5.0     20        0   29.0
Qui3     Qui     0.0     20        0   37.5
Qui4     Qui     7.1     14        0   24.0
Rio1     Rio    12.5     16        0   41.0
Rio2     Rio     0.0     16        0   26.5
Rio3     Rio    30.0     10        0   20.0
Rio4     Rio    26.7     15        0   23.0