Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 14
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

41 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     6.0    199        0    5.6
Qui1     Qui    17.2    215        0    6.3
Qui2     Qui     0.0     75        0    2.2
Qui3     Qui    11.0     82        0    3.7
Qui4     Qui    13.2    106        0    4.4
Rio1     Rio     3.6     84        0    3.2
Rio2     Rio     9.8    112        0    4.4
Rio3     Rio     1.4    140        0    3.5
Rio4     Rio     6.2    194        0    5.3