Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 31
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    56.6     53        0    9.0
Qui1     Qui    41.9     31        0    5.7
Qui2     Qui    70.0     30        0    5.2
Qui3     Qui    63.6     22        0    7.5
Qui4     Qui    80.8     26        0    6.7
Rio1     Rio    57.1     21        0    6.7
Rio2     Rio    35.3     51        0    7.8
Rio3     Rio    43.8     48        0    6.6
Rio4     Rio    51.9     27        0    7.3