Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 1  [CpG-destroying: 1]
    33414388 C>T  Pum=0.143  Qui=1.0  Rio=0.269

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    25.0      4        0   11.0
Qui1     Qui     0.0      2        1   10.0
Qui2     Qui     0.0      5        1   13.0
Qui3     Qui     0.0      9        1   13.0
Qui4     Qui     0.0      5        1   13.0
Rio1     Rio    25.0      4        0    5.5
Rio2     Rio    14.3      7        1   15.0
Rio3     Rio    33.3      3        0    9.0
Rio4     Rio    75.0      4        1   14.0