Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

8 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    26.3     38        0    7.8
Qui1     Qui    59.1     22        0    6.0
Qui2     Qui    57.4     47        0    8.7
Qui3     Qui    59.5     42        0   11.5
Qui4     Qui    70.3     37        0    7.4
Rio1     Rio    41.7     60        0   13.7
Rio2     Rio    35.1     37        0    8.0
Rio3     Rio    52.0     25        0    6.8
Rio4     Rio    65.7     35        0    9.7