Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 5
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      5        0    7.0
Qui1     Qui    33.3      6        0    6.0
Qui2     Qui    16.7      6        0    9.5
Qui3     Qui    20.0      5        0    5.0
Qui4     Qui    25.0      4        0    5.0
Rio1     Rio    71.4      7        0    8.0
Rio2     Rio   100.0      9        0   10.5
Rio3     Rio    83.3      6        0    7.0
Rio4     Rio    88.9      9        0    9.0