Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 2  [CpG-destroying: 2]
    2104834 C>T  Pum=1.0  Qui=0.0  Rio=1.0
    2104868 C>T  Pum=1.0  Qui=0.0  Rio=1.0

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      3        1    7.0
Qui1     Qui   100.0      4        0   12.0
Qui2     Qui   100.0      1        0    9.0
Qui3     Qui    50.0      2        0    6.0
Qui4     Qui   100.0      2        0    4.0
Rio1     Rio     0.0      7        1   14.5
Rio2     Rio     0.0      4        1    7.5
Rio3     Rio     0.0      1        1    8.0
Rio4     Rio     0.0      3        1    7.0