Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 79
  seen in >= 2 oysters: 16
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

33 CpGs in target; 11 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    18.0     50        0   16.0
Qui1     Qui    76.1    176        0   20.7
Qui2     Qui    60.5    162        0   20.5
Qui3     Qui    70.9    141        0   22.0
Qui4     Qui    60.4     96        0   15.8
Rio1     Rio    10.3     58        0   16.9
Rio2     Rio    15.9     69        0   10.7
Rio3     Rio     2.6     39        1    8.4
Rio4     Rio    51.5     33        0   10.6