Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 17
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

13 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    39.6     53        0    5.2
Qui1     Qui    32.7     49        0    6.9
Qui2     Qui    47.1     51        0    7.7
Qui3     Qui    25.0     32        0    5.9
Qui4     Qui    45.2     42        0    9.9
Rio1     Rio    64.6     65        0    7.2
Rio2     Rio    73.8     42        0    5.8
Rio3     Rio    66.7     15        0    4.2
Rio4     Rio    71.2     52        0    7.0