Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 28
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    49.6    131        0   13.5
Qui1     Qui    36.5    137        0    9.5
Qui2     Qui    67.1     73        0    9.2
Qui3     Qui    42.9    112        0   11.9
Qui4     Qui    51.8    141        0   10.2
Rio1     Rio    51.2     82        0   11.1
Rio2     Rio    54.1     85        1   10.1
Rio3     Rio    65.1     43        0    7.4
Rio4     Rio    59.4    133        0   11.3