Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 7
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum              0        0   10.5
Qui1     Qui              0        0   29.5
Qui2     Qui              0        0   34.5
Qui3     Qui              0        0   43.5
Qui4     Qui              0        0   41.0
Rio1     Rio              0        0   25.5
Rio2     Rio     0.0      2        0   22.5
Rio3     Rio              0        0    9.0
Rio4     Rio              0        0   12.0