Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum              0        0    8.0
Qui1     Qui     0.0      1        0   19.5
Qui2     Qui              0        0   22.5
Qui3     Qui              0        0   21.0
Qui4     Qui   100.0      1        0   12.0
Rio1     Rio              0        0   15.0
Rio2     Rio              0        0    6.0
Rio3     Rio     0.0      1        0   11.5
Rio4     Rio              0        0    9.0