Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.3     64        0    4.8
Qui1     Qui    50.7     73        0    5.9
Qui2     Qui    45.8     59        0    2.9
Qui3     Qui    55.9     59        0    3.7
Qui4     Qui    36.6     71        0    5.4
Rio1     Rio    79.6    103        0    6.7
Rio2     Rio    74.5     94        0    5.3
Rio3     Rio    55.0     20        0    2.6
Rio4     Rio    74.7     79        0    5.8