gene_id	chr	length	n_exons	n_cpg	gc_pct	cpg_oe	body_pct	body_n	body_frac_meth_cpg	exon_pct	exon_n	exon_frac_meth_cpg	intron_pct	intron_n	intron_frac_meth_cpg	promoter_pct	promoter_n	promoter_frac_meth_cpg	body_class	accession	protein_name	go_bp	annotation
GN000001	Chromosome_10A	1668	2	62	44.84412470023981	0.7487835959221502	1.0101010101010102	8	0	1.0101010101010102	8	0	NA	NA	NA	0.576	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000002	Chromosome_10A	219	1	14	51.598173515981735	0.9733333333333334	0.5263157894736842	11	0	0.5263157894736842	11	0	NA	NA	NA	1.0101010101010102	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000003	Chromosome_10A	603	1	18	44.776119402985074	0.6184967804433301	0	7	0	0	7	0	NA	NA	NA	0.48661800486618007	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000004	Chromosome_10A	1818	2	65	44.77447744774477	0.7247559001030371	0.5625879043600562	57	0	0.4903809883062995	49	0	1.5544041450777202	8	0	0.5775577557755776	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000005	Chromosome_10A	1668	2	63	44.84412470023981	0.7608607506950881	0.29239766081871343	13	0	0	2	0	0.3115264797507788	11	0	0.5860579888957433	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000006	Chromosome_10A	501	1	21	44.71057884231537	0.8520408163265306	NA	0	NA	NA	NA	NA	NA	NA	NA	0.30120481927710846	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000007	Chromosome_10A	612	1	19	44.6078431372549	0.650481091966883	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000008	Chromosome_10A	501	1	21	44.71057884231537	0.8520408163265306	NA	0	NA	NA	NA	NA	NA	NA	NA	0	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000009	Chromosome_10A	603	1	18	44.776119402985074	0.6184967804433301	2.542372881355932	4	0	2.542372881355932	4	0	NA	NA	NA	0.6389776357827476	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000010	Chromosome_10A	525	1	24	44.76190476190476	0.9214567792891619	2.380952380952381	6	0	2.380952380952381	6	0	NA	NA	NA	0.7255139056831923	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000011	Chromosome_10A	2026	2	64	40.52319842053307	0.7759479126771351	0.2991772625280479	36	0	0.47244094488188976	19	0	0.14245014245014245	17	0	0.5543237250554324	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000012	Chromosome_10A	612	1	19	44.44444444444444	0.6525252525252525	1.0291595197255574	19	0	1.0291595197255574	19	0	NA	NA	NA	0.1654259718775848	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000013	Chromosome_10A	2021	3	66	43.740722414646214	0.6943028914972803	0.6439742410303588	66	0	0.6859382655560999	62	0	0	4	0	1.1937059142702116	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000014	Chromosome_10A	621	1	27	47.50402576489533	0.7816783216783216	0.4329004329004329	25	0	0.4329004329004329	25	0	NA	NA	NA	0.65302568567697	70	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000015	Chromosome_10A	6526	8	104	37.09776279497395	0.4632475598935226	1.433430515063168	94	0	2.303523035230352	24	0	1.2433392539964476	70	0	2.0240963855421685	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000016	Chromosome_10A	1673	2	67	46.86192468619247	0.7343487945492663	0.41208791208791207	40	0	0.43352601156069365	37	0	0	3	0	0.4077471967380224	44	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000017	Chromosome_10A	2521	4	90	43.87147957159857	0.7471031600991791	1.5332197614991483	28	0	1.4450867052023122	16	0	1.6597510373443984	12	0	0.39184952978056425	49	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000018	Chromosome_10A	606	1	28	46.20462046204621	0.8786701879757651	0	16	0	0	16	0	NA	NA	NA	0.9803921568627451	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000019	Chromosome_10A	1413	1	54	46.2137296532201	0.7253317616639416	0.30959752321981426	16	0	0.30959752321981426	16	0	NA	NA	NA	0.5208333333333334	35	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000020	Chromosome_10A	606	1	27	46.039603960396036	0.8527204502814258	NA	0	NA	NA	NA	NA	NA	NA	NA	0.28901734104046245	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000021	Chromosome_10A	1413	1	54	46.2137296532201	0.7253317616639416	0	11	0	0	11	0	NA	NA	NA	0	6	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000022	Chromosome_10A	606	1	28	46.039603960396036	0.8814545454545455	0.2518891687657431	19	0	0.2518891687657431	19	0	NA	NA	NA	0	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000023	Chromosome_10A	1356	1	49	46.091445427728615	0.6869300911854104	0.32786885245901637	32	0	0.32786885245901637	32	0	NA	NA	NA	0.1510574018126888	27	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000024	Chromosome_10A	2247	4	82	44.014241210502895	0.758846495996837	0.7751937984496124	41	0	0.8086253369272237	17	0	0.7518796992481203	24	0	0.5564830272676683	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000025	Chromosome_10A	1781	2	74	46.996069623806854	0.7607157287157287	1.1811023622047243	15	0	1.1811023622047243	15	0	NA	NA	NA	0.4479283314669653	32	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000026	Chromosome_10A	727	2	36	47.18019257221458	0.889901394083645	0.6191950464396285	35	0	0.5444646098003629	31	0	1.0526315789473684	4	0	0.8278145695364238	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000027	Chromosome_10A	924	1	49	43.61471861471861	1.1151174818974434	0.24154589371980675	42	0	0.24154589371980675	42	0	NA	NA	NA	0.973630831643002	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000028	Chromosome_10A	261	1	16	50.191570881226056	0.9738805970149254	0.4854368932038835	13	0	0.4854368932038835	13	0	NA	NA	NA	0.7763975155279503	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000029	Chromosome_10A	954	1	33	44.863731656184484	0.6977393617021277	0.6289308176100629	33	0	0.6289308176100629	33	0	NA	NA	NA	0.5369127516778524	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000030	Chromosome_10A	1360	2	56	46.029411764705884	0.7866712115108508	0.7518796992481203	34	0	0.7518796992481203	34	0	NA	NA	NA	0.6329113924050633	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000031	Chromosome_10A	3934	7	38	34.0620233858668	0.3330548444806851	14.4880174291939	20	0	12.544802867383513	13	0	17.5	7	0	5.613126079447323	33	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000032	Chromosome_10A	3674	4	28	30.293957539466522	0.33298806225237587	9.22233300099701	28	0	4.148471615720524	15	0	20.253164556962027	13	0	2.932551319648094	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000033	Chromosome_10A	1191	1	45	45.256087321578505	0.745679939894816	0.3194888178913738	29	0	0.3194888178913738	29	0	NA	NA	NA	4.533678756476684	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000034	Chromosome_10A	560	3	14	40.17857142857143	0.619566935356409	0	1	0	0	1	0	NA	NA	NA	0.5159958720330238	48	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000035	Chromosome_10A	1192	3	45	45.0503355704698	0.7519345071212291	0	12	0	0	9	0	0	3	0	0.1937984496124031	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000036	Chromosome_10A	1794	3	72	46.15384615384615	0.7603708609271523	3.4482758620689653	4	0	3.4482758620689653	4	0	NA	NA	NA	0.8225616921269095	35	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000037	Chromosome_10A	714	1	36	47.89915966386555	0.8795209580838323	0	3	0	0	3	0	NA	NA	NA	0.8695652173913043	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000038	Chromosome_10A	420	1	13	44.523809523809526	0.6705969049373618	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7633587786259542	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000039	Chromosome_10A	489	1	21	47.648261758691206	0.7616822429906542	1.694915254237288	3	0	1.694915254237288	3	0	NA	NA	NA	0.7326007326007326	11	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000040	Chromosome_10A	1794	3	72	46.09810479375697	0.7624039380954067	NA	0	NA	NA	NA	NA	NA	NA	NA	1.5151515151515151	8	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000041	Chromosome_10A	714	1	37	48.03921568627451	0.8983880840644767	0	9	0	0	9	0	NA	NA	NA	0.5154639175257731	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000042	Chromosome_10A	420	1	13	44.523809523809526	0.6705969049373618	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3215434083601286	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000043	Chromosome_10A	489	1	21	47.852760736196316	0.7568543632075472	0.7722007722007722	9	0	0.7722007722007722	9	0	NA	NA	NA	0	16	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000044	Chromosome_10A	1169	3	48	45.93669803250641	0.7865874172928115	0.8620689655172413	8	0	0.8620689655172413	8	0	NA	NA	NA	0.30257186081694404	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000045	Chromosome_10A	432	1	17	46.75925925925926	0.7216981132075472	NA	0	NA	NA	NA	NA	NA	NA	NA	0.2053388090349076	15	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000046	Chromosome_10A	786	1	39	47.20101781170484	0.8910010463899547	NA	0	NA	NA	NA	NA	NA	NA	NA	3.3333333333333335	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000047	Chromosome_10A	420	1	13	44.523809523809526	0.6705969049373618	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000048	Chromosome_10A	432	1	17	46.75925925925926	0.7216981132075472	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000049	Chromosome_10A	1747	4	74	46.307956496851745	0.7955667146672575	0.8421052631578947	45	0	0.875	40	0	0.6666666666666666	5	0	0.8064516129032258	10	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000050	Chromosome_10A	786	1	39	47.20101781170484	0.8910010463899547	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7112375533428165	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000051	Chromosome_10A	420	1	13	44.523809523809526	0.6705969049373618	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000052	Chromosome_10A	432	1	17	46.75925925925926	0.7216981132075472	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000053	Chromosome_10A	1804	4	78	46.507760532150776	0.8074923389457012	0.31695721077654515	27	0	0	22	0	1.8181818181818181	5	0	1.3513513513513513	4	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000054	Chromosome_10A	1804	3	77	46.56319290465632	0.794309208081016	0	1	0	0	1	0	NA	NA	NA	0.16420361247947454	26	0	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000055	Chromosome_10A	1804	4	78	46.61862527716186	0.8032423792670396	0.6109979633401222	20	0	0.6109979633401222	20	0	NA	NA	NA	0	1	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000056	Chromosome_10A	924	1	48	43.61471861471861	1.0923599822668835	0.36656891495601174	47	0	0.36656891495601174	47	0	NA	NA	NA	0.47028644719965795	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000057	Chromosome_10A	1794	1	72	46.54403567447046	0.747733666770866	0.48154093097913325	65	0	0.48154093097913325	65	0	NA	NA	NA	0.467687074829932	52	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000058	Chromosome_10A	593	3	27	46.20573355817875	0.8532374100719424	0.42735042735042733	14	0	0.6097560975609756	10	0	0	4	0	0.49295774647887325	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000059	Chromosome_10A	552	1	16	44.20289855072464	0.619398274773827	0.8113590263691683	16	0	0.8113590263691683	16	0	NA	NA	NA	0.3125	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000060	Chromosome_10A	1576	4	7	42.38578680203046	0.09944920716481416	12.5	6	0	17.679558011049725	4	0	1.2048192771084338	2	0	22.09051724137931	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000061	Chromosome_10A	720	3	36	47.361111111111114	0.891640866873065	1.1235955056179776	7	0	1.9607843137254901	4	0	0	3	0	13.85135135135135	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000062	Chromosome_10A	636	1	22	44.9685534591195	0.7095334685598377	0.36231884057971014	22	0	0.36231884057971014	22	0	NA	NA	NA	0.27100271002710025	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000063	Chromosome_10A	708	3	35	47.31638418079096	0.8834224598930481	0.6793478260869565	35	0	0.8250825082508251	29	0	0	6	0	0.6651884700665188	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000064	Chromosome_10A	1959	3	59	41.04134762633997	0.7192166965352449	0.7715387912558938	59	0	0.9211873080859775	54	0	0	5	0	0.704225352112676	62	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000065	Chromosome_10A	358	2	15	46.089385474860336	0.7897058823529411	1.4336917562724014	15	0	1.4336917562724014	15	0	NA	NA	NA	0.7672634271099744	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000066	Chromosome_10A	489	1	22	47.648261758691206	0.7979528259902091	0.6722689075630253	22	0	0.6722689075630253	22	0	NA	NA	NA	0.9049773755656109	64	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000067	Chromosome_10A	231	1	14	50.64935064935065	0.9506172839506173	5.2805280528052805	14	0	5.2805280528052805	14	0	NA	NA	NA	0.5633802816901409	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000068	Chromosome_10A	1917	1	71	44.9660928534168	0.7404161566707467	0.26219192448872575	63	0	0.26219192448872575	63	0	NA	NA	NA	0.6751687921980495	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000069	Chromosome_10A	2064	1	80	45.30038759689923	0.7624113475177305	0.30864197530864196	56	0	0.30864197530864196	56	0	NA	NA	NA	1.1075949367088607	65	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000070	Chromosome_10A	2031	3	80	45.150172328902016	0.7799164786636587	0.5722460658082976	80	0	0.5903187721369539	70	0	0.49627791563275436	10	0	1.5977443609022557	63	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000071	Chromosome_10A	1923	3	65	44.097763910556424	0.7080786508579424	1.6091954022988506	65	0	1.7171717171717171	60	0	0.5128205128205128	5	0	1.0353066100345103	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000072	Chromosome_10A	396	1	24	48.484848484848484	1.0476190476190477	1.1904761904761905	24	0	1.1904761904761905	24	0	NA	NA	NA	0.5649717514124294	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000073	Chromosome_10A	270	1	5	45.55555555555556	0.35980810234541577	40.33264033264033	5	0	40.33264033264033	5	0	NA	NA	NA	43.14401622718053	54	0.2037037037037037	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000074	Chromosome_10A	917	2	21	42.74809160305343	0.5017457008858781	42.08375893769152	21	0.09523809523809523	41.5938864628821	20	0.1	49.20634920634921	1	0	52.11649170335252	53	0.4339622641509434	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000075	Chromosome_10A	393	1	5	39.69465648854962	0.36694677871148457	0	5	0	0	5	0	NA	NA	NA	1.5126050420168067	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000076	Chromosome_10A	657	1	25	47.1841704718417	0.6892861639179152	0.2932551319648094	25	0	0.2932551319648094	25	0	NA	NA	NA	0.5597014925373134	40	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000077	Chromosome_10A	836	2	30	44.73684210526316	0.7231833910034602	0.4889975550122249	21	0	0.5813953488372093	17	0	0	4	0	0.5205622071837585	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000078	Chromosome_10A	3179	4	114	44.982698961937714	0.721636798088411	0.6443694384780607	114	0	0.6844380403458213	96	0	0.4140786749482402	18	0	0.8928571428571429	62	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000079	Chromosome_10A	555	1	30	42.88288288288288	1.1787610619469027	0.5420054200542005	30	0	0.5420054200542005	30	0	NA	NA	NA	0.5227181342983515	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000080	Chromosome_10A	498	1	28	47.99196787148595	1.0004304778303916	0.5558643690939411	28	0	0.5558643690939411	28	0	NA	NA	NA	0.7358953393295176	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000081	Chromosome_10A	2649	4	88	43.97885994714987	0.704798185941043	1.2651265126512652	88	0	1.3426736719206072	83	0	0	5	0	0.6276150627615062	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000082	Chromosome_10A	1252	3	46	45.52715654952077	0.7199	0.8075370121130552	46	0	0.933852140077821	42	0	0	4	0	0.6103763987792472	68	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000083	Chromosome_10A	381	1	18	44.61942257217848	0.9625263157894737	0.5780346820809249	18	0	0.5780346820809249	18	0	NA	NA	NA	0.7130124777183601	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000084	Chromosome_10A	1155	2	35	43.722943722943725	0.6563139266811703	0.6998444790046656	35	0	0.7431874483897605	34	0	0	1	0	0.7140172867343104	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000085	Chromosome_10A	1833	1	73	41.789416257501365	0.9123506791032564	0.4189108318372232	72	0	0.4189108318372232	72	0	NA	NA	NA	0.9004237288135594	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000086	Chromosome_10A	1872	1	68	41.98717948717949	0.8243278246904626	0.4838709677419355	68	0	0.4838709677419355	68	0	NA	NA	NA	0.7074490220557637	51	0	unmethylated (<10%)	Q6R7G0	Putative transmembrane protein ORF68	NA	hit, no GO BP
GN000087	Chromosome_10A	237	1	17	48.10126582278481	1.2496898263027296	1.0335917312661498	17	0	1.0335917312661498	17	0	NA	NA	NA	0.3898635477582846	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000088	Chromosome_10A	1050	1	45	42.095238095238095	0.9675041464463419	0.5055611729019212	45	0	0.5055611729019212	45	0	NA	NA	NA	0.6824712643678161	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000089	Chromosome_10A	711	1	17	52.46132208157525	0.36056917844997316	92.10526315789474	17	1	92.10526315789474	17	1	NA	NA	NA	87.10359408033827	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000090	Chromosome_10A	528	1	23	48.29545454545455	0.7496296296296296	87.96992481203007	9	1	87.96992481203007	9	1	NA	NA	NA	90.93376764386537	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000091	Chromosome_10A	50242	9	1633	37.18601966482226	0.9405700695771504	0.7840537307409596	1468	0	0.6431956668923493	88	0	0.7903174818226979	1380	0	0.6775067750677507	51	0	unmethylated (<10%)	Q8CGQ8	Sodium/potassium/calcium exchanger 4 (Na(+)/K(+)/Ca(2+)-exchange protein 4) (Solute carrier family 24 member 4)	amelogenesis [GO:0097186]; calcium ion export across plasma membrane [GO:1990034]; calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; cellular response to high light intensity [GO:0071486]; cone photoresponse recovery [GO:0036368]; detection of chemical stimulus involved in sensory perception of smell [GO:0050911]; drinking behavior [GO:0042756]; intracellular calcium ion homeostasis [GO:0006874]; membrane repolarization [GO:0086009]; negative regulation of calcium-mediated signaling [GO:0050849]; olfactory nerve maturation [GO:0021630]; phototransduction [GO:0007602]; positive regulation of gene expression [GO:0010628]; potassium ion transmembrane transport [GO:0071805]; regulation of eating behavior [GO:1903998]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; response to melanocyte-stimulating hormone [GO:1990680]; response to odorant [GO:1990834]; sensory perception of smell [GO:0007608]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN000092	Chromosome_10A	7478	3	168	34.63492912543461	0.7762337183287086	85.40583766493403	168	0.9880952380952381	77.97427652733118	12	1	85.79483295464108	156	0.9871794871794872	33.95618556701031	22	0.2727272727272727	methylated (>=50%)	F1NWE3	Receptor-type tyrosine-protein phosphatase S (R-PTP-S) (EC 3.1.3.48) (Chick receptor tyrosine phosphatase alpha) (CRYP alpha) (CRYPalpha)	negative regulation of axon extension [GO:0030517]; negative regulation of axon regeneration [GO:0048681]; negative regulation of collateral sprouting [GO:0048671]; negative regulation of dendritic spine development [GO:0061000]; peptidyl-tyrosine dephosphorylation [GO:0035335]; signal transduction [GO:0007165]; synaptic membrane adhesion [GO:0099560]	hit with GO BP
GN000093	Chromosome_10A	267	1	1	43.82022471910113	0.07802454704850964	17.647058823529413	1	0	17.647058823529413	1	0	NA	NA	NA	75.32327586206897	38	0.868421052631579	NA	NA	NA	NA	no Swiss-Prot hit
GN000094	Chromosome_10A	381	1	24	41.99475065616798	1.439773264052905	0.10582010582010581	24	0	0.10582010582010581	24	0	NA	NA	NA	1.0281797410510283	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000095	Chromosome_10A	9159	4	232	36.008297849110164	0.7864779365580505	0.6836544437538844	214	0	0.5249343832020997	21	0	0.6951718883915817	193	0	0.4966887417218543	56	0	unmethylated (<10%)	P22274	ADP-ribosylation factor	cellular response to reactive oxygen species [GO:0034614]; intracellular protein transport [GO:0006886]	hit with GO BP
GN000096	Chromosome_10A	540	1	26	44.25925925925926	0.9908256880733946	0.5847953216374269	26	0	0.5847953216374269	26	0	NA	NA	NA	3.0784618804178705	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000097	Chromosome_10A	312	1	10	45.51282051282051	0.6314511232544019	1.5463917525773196	10	0	1.5463917525773196	10	0	NA	NA	NA	0.2938295788442703	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000098	Chromosome_10A	1227	1	45	37.65281173594132	1.2298149096821613	0.46806167400881055	45	0	0.46806167400881055	45	0	NA	NA	NA	1.2588116817724069	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000099	Chromosome_10A	1581	1	58	47.817836812144215	0.9018736169166461	0.7552870090634441	43	0	0.7552870090634441	43	0	NA	NA	NA	0.5837711617046117	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000100	Chromosome_10A	513	1	20	43.07992202729045	0.8441665295376007	0.6555723651033787	20	0	0.6555723651033787	20	0	NA	NA	NA	1.3185433235663457	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000101	Chromosome_10A	255	1	7	47.450980392156865	0.5059523809523809	1.6736401673640167	7	0	1.6736401673640167	7	0	NA	NA	NA	4.201680672268908	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000102	Chromosome_10A	573	1	16	43.455497382198956	0.8084656084656084	0.7352941176470589	14	0	0.7352941176470589	14	0	NA	NA	NA	3.6363636363636362	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000103	Chromosome_10A	1230	2	30	42.357723577235774	0.5474939909196118	45.562599049128366	25	0.36	45.562599049128366	25	0.36	NA	NA	NA	17.134416543574595	30	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000104	Chromosome_10A	354	1	17	43.78531073446328	1.0070281124497993	0.6933744221879815	17	0	0.6933744221879815	17	0	NA	NA	NA	1.2651461154668568	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000105	Chromosome_10A	683	2	21	42.4597364568082	0.683	1.2131715771230502	21	0	1.1727078891257996	18	0	1.3888888888888888	3	0	0.41050903119868637	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000106	Chromosome_10A	890	2	27	40.1123595505618	0.772519771105253	0.41297935103244837	27	0	0.41297935103244837	27	0	NA	NA	NA	1.6081000595592614	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000107	Chromosome_10A	255	1	7	47.450980392156865	0.5059523809523809	0	7	0	0	7	0	NA	NA	NA	0.2079002079002079	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000108	Chromosome_10A	366	1	4	39.61748633879781	0.33841886269070737	0	4	0	0	4	0	NA	NA	NA	1.4997000599880024	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000109	Chromosome_10A	273	1	7	42.857142857142854	0.5808510638297872	0.9302325581395349	7	0	0.9302325581395349	7	0	NA	NA	NA	1.406050276949297	43	0	unmethylated (<10%)	Q5F389	WW domain-containing oxidoreductase (EC 1.1.1.-)	cellular response to transforming growth factor beta stimulus [GO:0071560]; negative regulation of Wnt signaling pathway [GO:0030178]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN000110	Chromosome_10A	234	1	14	48.717948717948715	1.0095531587057012	0.975609756097561	13	0	0.975609756097561	13	0	NA	NA	NA	1.1985834922364478	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000111	Chromosome_10A	693	1	20	42.857142857142854	0.646093604325937	0.655241935483871	20	0	0.655241935483871	20	0	NA	NA	NA	0.5783132530120482	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000112	Chromosome_10A	492	1	12	43.292682926829265	0.5385878489326765	0.3466204506065858	12	0	0.3466204506065858	12	0	NA	NA	NA	0.376940133037694	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000113	Chromosome_10A	960	1	37	39.166666666666664	1.0054347826086956	73.13218390804597	22	0.8636363636363636	73.13218390804597	22	0.8636363636363636	NA	NA	NA	91.37055837563452	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000114	Chromosome_10A	309	1	6	51.45631067961165	0.3020527859237537	3.0303030303030303	6	0	3.0303030303030303	6	0	NA	NA	NA	1.2690355329949239	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001701	Chromosome_10A	1014	1	40	42.50493096646943	0.8734978679415946	0.5102040816326531	40	0	0.5102040816326531	40	0	NA	NA	NA	0.7896468523799078	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000115	Chromosome_10A	393	1	4	38.93129770992366	0.33234672304439744	1.3605442176870748	4	0	1.3605442176870748	4	0	NA	NA	NA	3.567318757192175	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000116	Chromosome_10A	252	1	9	48.01587301587302	0.6388732394366197	3.9867109634551494	9	0	3.9867109634551494	9	0	NA	NA	NA	0.5949656750572082	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000117	Chromosome_10A	444	1	10	51.126126126126124	0.3503787878787879	14.563106796116505	10	0	14.563106796116505	10	0	NA	NA	NA	2.229299363057325	32	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000118	Chromosome_10A	345	1	16	47.82608695652174	0.8134394341290893	3.11284046692607	15	0	3.11284046692607	15	0	NA	NA	NA	0.44033465433729635	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000119	Chromosome_10A	255	1	8	47.84313725490196	0.5666666666666667	2.150537634408602	5	0	2.150537634408602	5	0	NA	NA	NA	5.361702127659575	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000120	Chromosome_10A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000121	Chromosome_10A	255	1	8	47.84313725490196	0.5666666666666667	1.1111111111111112	8	0	1.1111111111111112	8	0	NA	NA	NA	0.9929906542056075	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000122	Chromosome_10A	393	1	2	38.93129770992366	0.16388657214345287	0.8849557522123894	2	0	0.8849557522123894	2	0	NA	NA	NA	0.8077544426494345	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000123	Chromosome_10A	324	1	20	49.382716049382715	1.0150375939849625	0.8888888888888888	20	0	0.8888888888888888	20	0	NA	NA	NA	6.914893617021277	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000124	Chromosome_10A	492	1	12	43.08943089430894	0.5410557184750733	0.8093525179856115	12	0	0.8093525179856115	12	0	NA	NA	NA	0.4529441368897836	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000125	Chromosome_10A	1839	1	49	46.87330070690593	1.026414707490432	2.5678650036683788	48	0	2.5678650036683788	48	0	NA	NA	NA	10.224045440201957	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000126	Chromosome_10A	1362	2	41	48.6784140969163	0.750968262506724	1.1483253588516746	37	0	1.1661807580174928	36	0	0	1	0	2.64808362369338	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000127	Chromosome_10A	1773	1	62	50.366610265087424	0.6037567968363816	3.0303030303030303	12	0	3.0303030303030303	12	0	NA	NA	NA	0.574345883854499	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000128	Chromosome_10A	2112	4	71	49.81060606060606	0.5995513920042221	9.523809523809524	2	0	9.523809523809524	2	0	NA	NA	NA	5.633802816901408	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000129	Chromosome_10A	7141	8	238	50.0910236661532	0.5855997342753145	NA	0	NA	NA	NA	NA	NA	NA	NA	9.523809523809524	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000130	Chromosome_10A	2112	4	71	49.81060606060606	0.6003362959404276	0	3	0	0	3	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000131	Chromosome_10A	1890	3	61	49.682539682539684	0.5802973715735326	NA	0	NA	NA	NA	NA	NA	NA	NA	6.0606060606060606	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000132	Chromosome_10A	495	1	16	50.303030303030305	0.5508415634997913	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000133	Chromosome_10A	540	1	16	48.7037037037037	0.5901639344262295	2.7777777777777777	3	0	2.7777777777777777	3	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000134	Chromosome_10A	12319	7	267	37.81962821657602	0.6196761801770572	73.05780800418519	264	0.8977272727272727	72.47457627118644	35	0.9142857142857143	73.10657596371883	229	0.8951965065502183	67.22670250896057	46	0.9347826086956522	methylated (>=50%)	Q8N5I4	Polyprenol dehydrogenase (EC 1.1.1.441) (DHRSXY) (Dehydrogenase/reductase SDR family member on chromosome X) (Dolichal reductase)	dolichyl monophosphate biosynthetic process [GO:0043048]; positive regulation of autophagy [GO:0010508]	hit with GO BP
GN000135	Chromosome_10A	826	2	27	45.27845036319613	0.6378378378378379	85.60386473429952	27	1	88.15642458100558	26	1	69.28571428571429	1	1	65.82619727243895	67	0.8656716417910447	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000136	Chromosome_10A	11987	5	269	35.772086426962545	0.7087369635490401	89.80080548601285	258	0.9534883720930233	79.6622097114708	26	0.6923076923076923	90.65062230873592	232	0.9827586206896551	31.21570892289922	69	0.18840579710144928	methylated (>=50%)	Q9U221	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)	base-excision repair [GO:0006284]; base-excision repair, AP site formation via deaminated base removal [GO:0097510]	hit with GO BP
GN000137	Chromosome_10A	16269	9	215	35.98869014690516	0.40949317385526157	92.61527043324983	205	0.9951219512195122	94.27193246909859	76	1	91.87885285446261	129	0.9922480620155039	96.65560377840184	46	1	methylated (>=50%)	Q96ME1	F-box/LRR-repeat protein 18 (F-box and leucine-rich repeat protein 18)	regulation of apoptotic process [GO:0042981]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN000138	Chromosome_10A	1221	1	86	54.463554463554466	0.9931899438170365	0.2976190476190476	23	0	0.2976190476190476	23	0	NA	NA	NA	0.45112781954887216	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000139	Chromosome_10A	204	1	6	61.76470588235294	0.32210526315789473	0	6	0	0	6	0	NA	NA	NA	0.4053271569195136	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000140	Chromosome_10A	558	1	15	45.51971326164875	0.5244360902255639	0.4580152671755725	15	0	0.4580152671755725	15	0	NA	NA	NA	0.6944444444444444	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000141	Chromosome_10A	450	1	2	36.44444444444444	0.16366612111292964	3.278688524590164	2	0	3.278688524590164	2	0	NA	NA	NA	0.2801120448179272	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000142	Chromosome_10A	213	1	10	42.72300469483568	1.0757575757575757	0.45351473922902497	10	0	0.45351473922902497	10	0	NA	NA	NA	4.174730439590821	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000143	Chromosome_10A	273	1	14	48.35164835164835	1.011111111111111	0.7672634271099744	14	0	0.7672634271099744	14	0	NA	NA	NA	0.8819018404907976	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000144	Chromosome_10A	1749	2	11	32.81875357347055	0.23972935591192854	4.395604395604396	10	0	6.280193236714976	3	0	2.8225806451612905	7	0	0.8286088094199738	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011668	Chromosome_10A	3146	3	83	37.25365543547362	0.7604345040479935	0.9405125793557488	82	0	0.8075370121130552	22	0	0.9877329934682173	60	0	0.7008903201363895	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002781	Chromosome_10A	1298	2	6	36.59476117103236	0.13994609164420485	11.904761904761905	4	0	11.904761904761905	4	0	NA	NA	NA	19.26605504587156	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000145	Chromosome_10A	20714	6	626	37.974316887129476	0.8383649594413074	0.6405917997953884	581	0	0.65206173476568	284	0	0.634800322137477	297	0	0.7449450159631075	49	0	unmethylated (<10%)	P06276	Cholinesterase (EC 3.1.1.8) (Acylcholine acylhydrolase) (Butyrylcholine esterase) (Choline esterase II) (Pseudocholinesterase)	acetylcholine catabolic process [GO:0006581]; choline metabolic process [GO:0019695]; cocaine catabolic process [GO:0050784]; learning [GO:0007612]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of synaptic transmission [GO:0050805]; neuroblast differentiation [GO:0014016]; peptide hormone processing [GO:0016486]; response to alkaloid [GO:0043279]; response to folic acid [GO:0051593]; response to glucocorticoid [GO:0051384]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN000146	Chromosome_10A	4482	7	124	37.95180722891566	0.7693802795843612	0.8946726311508744	124	0	0.6969180734087037	100	0	2.282608695652174	24	0	0.5295383087870263	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000147	Chromosome_10A	2507	4	49	35.06182688472278	0.6364790367039025	6.227758007117438	49	0	10.218340611353712	25	0	3.4834834834834836	24	0	3.393760539629005	47	0	unmethylated (<10%)	Q96MB7	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN000148	Chromosome_10A	1407	3	27	37.953091684434966	0.543320938215103	3.8480272771553823	27	0	0.7082152974504249	15	0	5.4936896807720865	12	0	0.6946299759551162	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000149	Chromosome_10A	825	1	11	43.15151515151515	0.2879581151832461	0.9345794392523364	5	0	0.9345794392523364	5	0	NA	NA	NA	9.404990403071018	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000150	Chromosome_10A	546	1	38	48.9010989010989	1.164963503649635	0	12	0	0	12	0	NA	NA	NA	0.6554690700532568	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000151	Chromosome_10A	854	2	10	42.15456674473068	0.2665501420144199	0.4694835680751174	8	0	0.5681818181818182	5	0	0.4	3	0	0.8910891089108911	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000152	Chromosome_10A	7963	5	144	37.536104483234965	0.5134028871614355	87.71101573676681	144	0.9861111111111112	92.99719887955182	46	1	85.8981748318924	98	0.9795918367346939	90.27027027027027	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000153	Chromosome_10A	645	1	14	42.17054263565891	0.48845134418780767	0	9	0	0	9	0	NA	NA	NA	3.126458236117592	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000154	Chromosome_10A	498	1	18	42.369477911646584	0.8134301270417423	0.7481296758104738	18	0	0.7481296758104738	18	0	NA	NA	NA	0.6263048016701461	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000155	Chromosome_10A	3587	3	99	36.492890995260666	0.8317164913201113	0.8257900587581388	96	0	0.9135896459840122	34	0	0.7629427792915532	62	0	1.2213740458015268	59	0	unmethylated (<10%)	P02637	Sarcoplasmic calcium-binding protein (SCP)	NA	hit, no GO BP
GN000156	Chromosome_10A	7191	4	166	38.283966068696984	0.6332489854380521	0.7337395846287775	166	0	0.32362459546925565	18	0	0.7871802080404836	148	0	0.4336513443191674	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000157	Chromosome_10A	1354	4	8	31.24076809453471	0.24238084582680688	NA	0	NA	NA	NA	NA	NA	NA	NA	85.20853540252182	40	0.75	NA	NA	NA	NA	no Swiss-Prot hit
GN000158	Chromosome_10A	11420	4	351	38.10858143607706	0.8472657089706271	1.0360984623506897	339	0	0.41379310344827586	42	0	1.101948478435379	297	0	0.5612998522895125	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000159	Chromosome_10A	756	1	36	46.560846560846564	0.8938811705586758	NA	0	NA	NA	NA	NA	NA	NA	NA	63.06122448979592	23	0.782608695652174	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN000160	Chromosome_10A	171	1	6	43.27485380116959	0.921832884097035	0.23148148148148148	6	0	0.23148148148148148	6	0	NA	NA	NA	0.6052141527001862	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000161	Chromosome_10A	186	1	10	43.01075268817204	1.2244897959183674	2.4390243902439024	10	0	2.4390243902439024	10	0	NA	NA	NA	2.816901408450704	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000162	Chromosome_10A	4446	3	175	38.68645973909132	1.0547485033836543	9.788235294117648	169	0.04142011834319527	42.48434237995825	16	0.4375	5.6351100503845135	153	0	0.8582217645039478	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000163	Chromosome_10A	180	1	8	39.44444444444444	1.196013289036545	0.9803921568627451	8	0	0.9803921568627451	8	0	NA	NA	NA	0.3546099290780142	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000164	Chromosome_10A	561	1	20	46.3458110516934	0.6678571428571428	0.3952569169960474	20	0	0.3952569169960474	20	0	NA	NA	NA	0.7587253414264037	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000165	Chromosome_10A	13439	10	372	36.967036237815314	0.8139501715393211	0.8400103385887826	362	0	0.89171974522293	52	0	0.8341722997267367	310	0	0.44627531754205285	76	0	unmethylated (<10%)	Q63118	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adrenomedullin receptor signaling pathway [GO:1990410]; angiogenesis [GO:0001525]; calcitonin gene-related peptide receptor signaling pathway [GO:1990408]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cellular response to sucrose stimulus [GO:0071329]; heart development [GO:0007507]; negative regulation of smooth muscle contraction [GO:0045986]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of smooth muscle cell proliferation [GO:0048661]; protein transport [GO:0015031]; receptor internalization [GO:0031623]	hit with GO BP
GN000166	Chromosome_10A	15958	12	309	35.27384384008021	0.6232719164862334	83.88516452586869	293	0.8600682593856656	89.79089790897909	28	0.9642857142857143	83.349148758024	265	0.8490566037735849	51.64334526521315	50	0.58	methylated (>=50%)	Q99KJ8	Dynactin subunit 2 (50 kDa dynein-associated polypeptide) (Dynactin complex 50 kDa subunit) (DCTN-50) (Growth cone membrane protein 23-48K) (GMP23-48K) (p50 dynamitin)	melanosome transport [GO:0032402]; mitotic metaphase chromosome alignment [GO:0007080]; mitotic spindle organization [GO:0007052]; protein localization to centrosome [GO:0071539]	hit with GO BP
GN000167	Chromosome_10A	1764	1	57	38.605442176870746	0.8778877887788779	0.49680624556423	56	0	0.49680624556423	56	0	NA	NA	NA	0.5905511811023622	36	0	unmethylated (<10%)	O16374	Beta-1,4-galactosyltransferase galt-1 (EC 2.4.1.-)	carbohydrate derivative biosynthetic process [GO:1901137]; N-glycan processing [GO:0006491]	hit with GO BP
GN000168	Chromosome_10A	822	1	20	43.7956204379562	0.7767907767907768	0.3663003663003663	19	0	0.3663003663003663	19	0	NA	NA	NA	0.4034582132564842	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000169	Chromosome_10A	11936	10	372	36.167895442359246	0.9531139720466336	0.786434013271074	356	0	0.5602240896358543	79	0	0.8420730306973896	277	0	0.5068790731354091	41	0	unmethylated (<10%)	P10867	L-gulonolactone oxidase (LGO) (EC 1.1.3.8) (L-gulono-gamma-lactone oxidase) (GLO)	L-ascorbic acid biosynthetic process [GO:0019853]	hit with GO BP
GN000170	Chromosome_10A	420	1	18	46.42857142857143	0.8249672632038412	0.8097165991902834	18	0	0.8097165991902834	18	0	NA	NA	NA	0.45936395759717313	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000171	Chromosome_10A	11062	9	327	37.02766226722112	0.8625341130604288	0.6806108897742363	283	0	0.632577754348972	43	0	0.6895872327849473	240	0	0.5818965517241379	49	0	unmethylated (<10%)	Q5RLM2	Solute carrier family 22 member 7 (Novel liver transporter) (Organic anion transporter 2) (rOAT2)	alpha-ketoglutarate transport [GO:0015742]; prostaglandin transport [GO:0015732]; response to stilbenoid [GO:0035634]; sodium-independent organic anion transport [GO:0043252]	hit with GO BP
GN000172	Chromosome_10A	1212	1	44	39.273927392739274	0.9495726495726495	0.40260142458965625	44	0	0.40260142458965625	44	0	NA	NA	NA	0.5158668125683914	48	0	unmethylated (<10%)	Q07263	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000173	Chromosome_10A	863	2	30	39.97682502896871	0.8733049989880591	0.8152173913043478	30	0	0.8152173913043478	30	0	NA	NA	NA	0.26375282592313487	43	0	unmethylated (<10%)	Q07263	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000174	Chromosome_10A	1014	1	49	42.50493096646943	1.086317722681359	0.8068854222700377	49	0	0.8068854222700377	49	0	NA	NA	NA	0.6367292225201072	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000175	Chromosome_10A	639	1	20	37.55868544600939	0.8897243107769424	0.5961251862891207	20	0	0.5961251862891207	20	0	NA	NA	NA	0.9184033910279054	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000176	Chromosome_10A	1413	1	61	42.604387827317765	0.9579554547879434	0.7321537522879805	61	0	0.7321537522879805	61	0	NA	NA	NA	0.40714062010648294	66	0	unmethylated (<10%)	Q25414	5-hydroxytryptamine receptor (5-HT receptor) (Serotonin receptor)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; positive regulation of MAPK cascade [GO:0043410]	hit with GO BP
GN000177	Chromosome_10A	387	1	12	50.12919896640827	0.4969502407704655	1.2121212121212122	12	0	1.2121212121212122	12	0	NA	NA	NA	0.5740057400574006	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000178	Chromosome_10A	16339	11	232	35.663137278903235	0.45915658511792373	84.29757600107138	225	0.9822222222222222	86.58403208166241	47	1	83.78311869411861	178	0.9775280898876404	85.47535211267606	39	1	methylated (>=50%)	Q3ULW8	Protein mono-ADP-ribosyltransferase PARP3 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 3) (ARTD3) (DNA ADP-ribosyltransferase PARP3) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 3) (ADPRT-3) (Poly [ADP-ribose] polymerase 3) (PARP-3) (Poly[ADP-ribose] synthase 3) (pADPRT-3)	DNA ADP-ribosylation [GO:0030592]; double-strand break repair [GO:0006302]; negative regulation of isotype switching [GO:0045829]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; protein auto-ADP-ribosylation [GO:0070213]; protein localization to site of double-strand break [GO:1990166]; regulation of mitotic spindle organization [GO:0060236]; telomere maintenance [GO:0000723]	hit with GO BP
GN000179	Chromosome_10A	5531	5	152	39.0887723738926	0.7219727514352084	0.6565014824227022	136	0	0.8882309400444115	29	0	0.5636309700385642	107	0	0.7355787843592722	53	0	unmethylated (<10%)	Q3ULW8	Protein mono-ADP-ribosyltransferase PARP3 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 3) (ARTD3) (DNA ADP-ribosyltransferase PARP3) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 3) (ADPRT-3) (Poly [ADP-ribose] polymerase 3) (PARP-3) (Poly[ADP-ribose] synthase 3) (pADPRT-3)	DNA ADP-ribosylation [GO:0030592]; double-strand break repair [GO:0006302]; negative regulation of isotype switching [GO:0045829]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; protein auto-ADP-ribosylation [GO:0070213]; protein localization to site of double-strand break [GO:1990166]; regulation of mitotic spindle organization [GO:0060236]; telomere maintenance [GO:0000723]	hit with GO BP
GN000180	Chromosome_10A	7619	6	106	34.0595878724242	0.4798411964688673	83.37353029846247	106	0.9528301886792453	94.03669724770643	28	1	80.75478783327075	78	0.9358974358974359	86.66666666666667	40	0.875	methylated (>=50%)	Q8BGA7	Integrator complex subunit 15	brain development [GO:0007420]; eye development [GO:0001654]; mRNA splicing, via spliceosome [GO:0000398]; regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]	hit with GO BP
GN000181	Chromosome_10A	14365	8	329	34.86947441698573	0.753495496167701	77.82002534854246	304	0.9210526315789473	86.37481554353172	41	0.9512195121951219	76.47785152029634	263	0.9163498098859315	8.466161484191273	93	0.03225806451612903	methylated (>=50%)	Q8BGX0	E3 ubiquitin-protein ligase TRIM23 (EC 2.3.2.27) (ADP-ribosylation factor domain-containing protein 1) (GTP-binding protein ARD-1) (RING-type E3 ubiquitin transferase TRIM23) (Tripartite motif-containing protein 23)	intracellular protein transport [GO:0006886]; positive regulation of autophagy [GO:0010508]; positive regulation of protein modification process [GO:0031401]; protein ubiquitination [GO:0016567]	hit with GO BP
GN000182	Chromosome_10A	25376	19	499	36.69609079445145	0.5907373201954329	92.01447836253564	490	0.9755102040816327	96.85466377440348	59	1	91.5439496713879	431	0.9721577726218097	0.5977286312014346	25	0	methylated (>=50%)	Q9H0H5	Rac GTPase-activating protein 1 (Male germ cell RacGap) (MgcRacGAP) (Protein CYK4 homolog) (CYK4) (HsCYK-4)	actomyosin contractile ring assembly [GO:0000915]; erythrocyte differentiation [GO:0030218]; mitotic cytokinesis [GO:0000281]; mitotic spindle midzone assembly [GO:0051256]; neuroblast proliferation [GO:0007405]; positive regulation of cytokinesis [GO:0032467]; regulation of attachment of spindle microtubules to kinetochore [GO:0051988]; regulation of embryonic development [GO:0045995]; regulation of small GTPase mediated signal transduction [GO:0051056]; Rho protein signal transduction [GO:0007266]; spermatogenesis [GO:0007283]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN000183	Chromosome_10A	17289	7	249	36.17907339927121	0.4459505151008189	81.10375007597399	248	0.9556451612903226	78.9795918367347	10	1	81.1689532042849	238	0.9537815126050421	80.68739770867431	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000184	Chromosome_10A	822	1	26	41.97080291970803	0.7226617975248529	85.58282208588957	21	1	85.58282208588957	21	1	NA	NA	NA	75.16439049064239	34	0.9411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000185	Chromosome_10A	333	1	18	48.648648648648646	0.9204545454545454	NA	0	NA	NA	NA	NA	NA	NA	NA	87.54345307068367	48	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000186	Chromosome_10A	3368	4	26	31.02731591448931	0.3212490736868365	36.881188118811885	26	0.34615384615384615	23.850574712643677	16	0.0625	54.457364341085274	10	0.8	0.6854256854256854	72	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000187	Chromosome_10A	4774	6	67	34.08043569333892	0.483635285970467	59.75407111997341	66	0.696969696969697	71.64948453608247	20	0.95	55.62024182713838	46	0.5869565217391305	37.303149606299215	31	0.41935483870967744	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020583	Chromosome_10A	365	1	5	38.9041095890411	0.36383572567783096	0.42735042735042733	5	0	0.42735042735042733	5	0	NA	NA	NA	0.45578851412944393	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000188	Chromosome_10A	4554	5	74	34.27755819060167	0.5537414965986395	10.310804144055254	72	0	13.356164383561644	22	0	8.596761757902852	50	0	3.2369443245576175	77	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000189	Chromosome_10A	3440	2	83	36.68604651162791	0.7218121144706239	0.5561993047508691	83	0	0.2638522427440633	14	0	0.6184987348889514	69	0	0.5394066526820498	48	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN000190	Chromosome_10A	6049	7	146	37.22929409819805	0.7004600180834695	0.6362222536406051	146	0	0.7262569832402235	44	0	0.6057164489873178	102	0	0.7859454461396209	41	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN000191	Chromosome_10A	14598	9	444	39.38895739142348	0.7852814431850563	1.1354420113544201	425	0	0.7088009450679268	70	0	1.2310543384737573	355	0	0.45061960195268497	58	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN000192	Chromosome_10A	64362	28	620	31.992480034803144	0.3764770480690716	92.52103648348978	605	0.9950413223140496	93.80072767982088	159	0.9937106918238994	92.16622046327552	446	0.9955156950672646	95.97554763117677	25	1	methylated (>=50%)	Q9P2P5	E3 ubiquitin-protein ligase HECW2 (EC 2.3.2.26) (HECT, C2 and WW domain-containing protein 2) (HECT-type E3 ubiquitin transferase HECW2) (NEDD4-like E3 ubiquitin-protein ligase 2)	protein ubiquitination [GO:0016567]; regulation of dendrite morphogenesis [GO:0048814]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN000193	Chromosome_10A	837	1	30	44.205495818399044	0.7696551724137931	0.7982583454281568	30	0	0.7982583454281568	30	0	NA	NA	NA	0.66417600664176	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000194	Chromosome_10A	1568	2	13	33.99234693877551	0.28700965897890796	0.37037037037037035	13	0	0.39011703511053314	10	0	0.3215434083601286	3	0	0.35842293906810035	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010787	Chromosome_10A	2990	3	23	34.247491638795985	0.26266137040714993	2.0502306509482318	23	0	2.2222222222222223	14	0	1.8886679920477136	9	0	0.5996184246388662	60	0	unmethylated (<10%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN000195	Chromosome_10A	801	1	29	44.31960049937578	0.7756962532558606	0.8814102564102564	29	0	0.8814102564102564	29	0	NA	NA	NA	3.045685279187817	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000196	Chromosome_10A	429	1	16	47.55244755244755	0.6661490683229814	0	12	0	0	12	0	NA	NA	NA	0.7260992335619201	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000197	Chromosome_10A	45317	19	711	34.99128362424697	0.515102406947756	87.90594988409316	682	0.9560117302052786	88.76751365471384	91	0.8461538461538461	87.81764190439101	591	0.9729272419627749	1.173881144534116	55	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000198	Chromosome_10A	8823	4	173	38.036948883599685	0.5443538205861584	89.46172125219547	172	0.9418604651162791	89.68481375358166	61	0.9344262295081968	89.37127922172209	111	0.9459459459459459	0.8903728436282693	54	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000199	Chromosome_10A	11021	11	312	35.94955085745395	0.8774645702083529	0.9213599792369582	312	0	0.8005123278898495	74	0	0.9520709577671088	238	0	21.649484536082475	21	0.38095238095238093	unmethylated (<10%)	Q9UA35	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (hfCNT)	purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]	hit with GO BP
GN000200	Chromosome_10A	15396	13	216	36.46401662769551	0.4224872854999817	85.21546961325967	211	0.9383886255924171	76.02459016393442	24	0.8333333333333334	86.32648005945009	187	0.9518716577540107	1.1618900077459333	60	0	methylated (>=50%)	F6XBL2	26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit RPN6)	proteasome assembly [GO:0043248]; stem cell differentiation [GO:0048863]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN000201	Chromosome_10A	25229	17	436	36.50164493241904	0.5188443154421956	81.2821728528854	435	0.9218390804597701	84.64140730717186	43	0.9534883720930233	80.90847508655727	392	0.9183673469387755	2.0097912909044062	75	0	methylated (>=50%)	Q5R694	Coiled-coil domain-containing protein 177	NA	hit, no GO BP
GN000202	Chromosome_10A	11428	5	189	35.946797339867	0.5121684018029229	77.29373437381619	189	0.8624338624338624	66.4199814986124	25	0.68	78.26373989107114	164	0.8902439024390244	41.613508442776734	48	0.3125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000203	Chromosome_10A	1218	1	51	42.610837438423644	0.9288256227758007	0.7818930041152263	51	0	0.7818930041152263	51	0	NA	NA	NA	0.8647313156269302	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000204	Chromosome_10A	1298	3	6	33.898305084745765	0.1626872219088801	88.88888888888889	1	1	88.88888888888889	1	1	NA	NA	NA	34.97191011235955	37	0.2702702702702703	NA	NA	NA	NA	no Swiss-Prot hit
GN002462	Chromosome_10A	875	1	28	39.08571428571429	0.8790183696900115	0.8782936010037641	28	0	0.8782936010037641	28	0	NA	NA	NA	13.808076422058186	39	0.07692307692307693	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000205	Chromosome_10A	1221	1	40	42.5061425061425	0.7341269841269841	1.2121212121212122	33	0	1.2121212121212122	33	0	NA	NA	NA	0.9956440572495333	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000206	Chromosome_10A	1023	1	27	47.40957966764418	0.47162176006556705	52.838427947598255	21	0.6666666666666666	52.838427947598255	21	0.6666666666666666	NA	NA	NA	36.75078864353312	16	0.1875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002618	Chromosome_10A	268	1	4	42.53731343283582	0.33657770800627945	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019229	Chromosome_10A	2266	3	34	33.53927625772286	0.5339931660186167	83.09859154929578	9	1	84.11764705882354	7	1	79.06976744186046	2	1	83.06165839829907	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000207	Chromosome_10A	294	1	15	45.57823129251701	0.982620320855615	0.6160164271047228	15	0	0.6160164271047228	15	0	NA	NA	NA	1.491101491101491	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000208	Chromosome_10A	462	1	22	41.125541125541126	1.1364042933810377	8.02732707087959	22	0	8.02732707087959	22	0	NA	NA	NA	0.8337544214249621	66	0	unmethylated (<10%)	Q17RP2	Tigger transposable element-derived protein 6	NA	hit, no GO BP
GN000209	Chromosome_10A	732	1	18	39.07103825136612	0.6475011057054401	0.7352941176470589	18	0	0.7352941176470589	18	0	NA	NA	NA	0.9312320916905444	53	0	unmethylated (<10%)	P61289	Proteasome activator complex subunit 3 (11S regulator complex subunit gamma) (REG-gamma) (Activator of multicatalytic protease subunit 3) (Ki nuclear autoantigen) (Proteasome activator 28 subunit gamma) (PA28g) (PA28gamma)	apoptotic process [GO:0006915]; flagellated sperm motility [GO:0030317]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136]; response to oxidative stress [GO:0006979]	hit with GO BP
GN000210	Chromosome_10A	822	1	13	46.35036496350365	0.29450997684929997	46.8944099378882	13	0.3076923076923077	46.8944099378882	13	0.3076923076923077	NA	NA	NA	84.50060901339829	34	0.9705882352941176	sparse (10-50%)	Q4FE47	Putative E3 ubiquitin-protein ligase XBAT35 (EC 2.3.2.27) (Ankyrin repeat domain and RING finger-containing protein XBAT35) (Protein XB3 homolog 5) (RING-type E3 ubiquitin transferase XBAT35)	protein ubiquitination [GO:0016567]; regulation of programmed cell death [GO:0043067]	hit with GO BP
GN000211	Chromosome_10A	237	1	6	45.14767932489451	0.5021186440677966	0.25252525252525254	6	0	0.25252525252525254	6	0	NA	NA	NA	3.7746374116772032	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000212	Chromosome_10A	618	1	10	44.49838187702265	0.3358695652173913	1.3245033112582782	8	0	1.3245033112582782	8	0	NA	NA	NA	8.346213292117465	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000213	Chromosome_10A	537	1	8	40.968342644320295	0.36983471074380164	0.6479481641468683	8	0	0.6479481641468683	8	0	NA	NA	NA	1.076320939334638	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000214	Chromosome_10A	1032	1	39	46.80232558139535	0.7563991730877655	0.5015045135406219	39	0	0.5015045135406219	39	0	NA	NA	NA	0.8335728657660247	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000215	Chromosome_10A	11237	9	285	37.26973391474593	0.730538855224631	0.6991051454138703	282	0	0.46022353714661407	34	0	0.7275287491199249	248	0	0.4185944040537563	59	0	unmethylated (<10%)	P30626	Sorcin (22 kDa protein) (CP-22) (CP22) (V19)	negative regulation of cardiac muscle contraction [GO:0055118]; negative regulation of heart rate [GO:0010459]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; regulation of calcium ion transport [GO:0051924]; regulation of cardiac muscle cell contraction [GO:0086004]; regulation of cell communication by electrical coupling [GO:0010649]; regulation of cell communication by electrical coupling involved in cardiac conduction [GO:1901844]; regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0061178]; regulation of relaxation of muscle [GO:1901077]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]; signal transduction [GO:0007165]	hit with GO BP
GN000216	Chromosome_10A	34352	23	808	35.543782021425244	0.7451742128698539	1.432310959648343	803	0	0.9196321471411435	104	0	1.5045644088808745	699	0	2.9342723004694835	46	0	unmethylated (<10%)	Q27874	Integrin beta pat-3 (Paralyzed arrest at two-fold protein 3)	cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; integrin-mediated signaling pathway [GO:0007229]; mitochondrion organization [GO:0007005]; muscle cell cellular homeostasis [GO:0046716]; muscle cell development [GO:0055001]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; positive regulation of axon regeneration [GO:0048680]; positive regulation of locomotion [GO:0040017]; positive regulation of myosin II filament organization [GO:1904901]; positive regulation of ovulation [GO:0060279]; positive regulation of sarcomere organization [GO:0060298]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of distal tip cell migration [GO:1903354]; regulation of vulval development [GO:0040028]; striated muscle cell development [GO:0055002]; vulval cell fate specification [GO:0072327]	hit with GO BP
GN000217	Chromosome_10A	1035	1	40	42.1256038647343	0.8717991913746631	1.1005135730007336	40	0	1.1005135730007336	40	0	NA	NA	NA	0.3828032979976443	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000218	Chromosome_10A	891	1	30	39.28170594837262	0.9049972914409534	0.47074646940147946	30	0	0.47074646940147946	30	0	NA	NA	NA	0.6378044066486278	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000219	Chromosome_10A	1035	1	46	42.80193236714976	1.002273588480485	1.1397720455908817	46	0	1.1397720455908817	46	0	NA	NA	NA	1.2820512820512822	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000220	Chromosome_10A	1009	2	30	44.301288404360754	0.6287126656420056	22.0125786163522	29	0	18.75	18	0	25	11	0	1.1623080116230802	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000221	Chromosome_10A	249	1	5	51.00401606425703	0.317440081591025	0	2	0	0	2	0	NA	NA	NA	0.6193425440686041	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000222	Chromosome_10A	33703	10	924	35.65854671690948	0.8628217807448901	0.9582759258878447	922	0	0.5841121495327103	60	0	0.97913636264953	862	0	0.3732890916632103	47	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000223	Chromosome_10A	333	1	9	42.94294294294294	0.6079107505070994	0	9	0	0	9	0	NA	NA	NA	0.4865103936311367	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000224	Chromosome_10A	870	1	36	42.98850574712644	0.898219048438441	0.5042016806722689	36	0	0.5042016806722689	36	0	NA	NA	NA	0.3973885892705081	59	0	unmethylated (<10%)	Q28199	Cyclin-dependent kinase 5 activator 1 (CDK5 activator 1) (Cyclin-dependent kinase 5 regulatory subunit 1) (TPKII regulatory subunit) [Cleaved into: Cyclin-dependent kinase 5 activator 1, p35 (p35); Cyclin-dependent kinase 5 activator 1, p25 (p25) (Tau protein kinase II 23 kDa subunit) (p23)]	axon guidance [GO:0007411]; axonal fasciculation [GO:0007413]; brain development [GO:0007420]; cerebral cortex radially oriented cell migration [GO:0021799]; embryo development ending in birth or egg hatching [GO:0009792]; ephrin receptor signaling pathway [GO:0048013]; G protein-coupled acetylcholine receptor signaling pathway [GO:0007213]; ionotropic glutamate receptor signaling pathway [GO:0035235]; negative regulation of DNA-templated transcription [GO:0045892]; neuron cell-cell adhesion [GO:0007158]; neuron differentiation [GO:0030182]; neuron migration [GO:0001764]; neuron projection development [GO:0031175]; positive regulation of microtubule polymerization [GO:0031116]; positive regulation of neuron apoptotic process [GO:0043525]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of dendritic spine morphogenesis [GO:0061001]	hit with GO BP
GN000225	Chromosome_10A	300	1	14	43	1.0427010923535254	0.26881720430107525	14	0	0.26881720430107525	14	0	NA	NA	NA	0.315955766192733	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000226	Chromosome_10A	10541	14	314	36.47661512190494	0.896074179357022	0.47134544745310925	307	0	0.537948777920711	115	0	0.44570502431118314	192	0	0.7184270229392488	53	0	unmethylated (<10%)	Q8BTY2	Sodium bicarbonate cotransporter 3 (Solute carrier family 4 member 7)	auditory receptor cell development [GO:0060117]; bicarbonate transport [GO:0015701]; camera-type eye photoreceptor cell differentiation [GO:0060219]; cellular response to growth factor stimulus [GO:0071363]; cochlear nucleus development [GO:0021747]; locomotory exploration behavior [GO:0035641]; phagosome acidification [GO:0090383]; purine nucleotide biosynthetic process [GO:0006164]; pyrimidine nucleotide biosynthetic process [GO:0006221]; regulation of intracellular pH [GO:0051453]; retina vasculature morphogenesis in camera-type eye [GO:0061299]; retinal cell programmed cell death [GO:0046666]; sensory perception of sound [GO:0007605]; visual perception [GO:0007601]	hit with GO BP
GN000227	Chromosome_10A	1460	3	52	44.58904109589041	0.7229099219196343	0.44920525224602625	52	0	0.7030827474310438	37	0	0	15	0	0.5702217529039071	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000228	Chromosome_10A	414	2	16	49.27536231884058	0.6441699893027326	0.6349206349206349	16	0	0.718562874251497	14	0	0	2	0	0.5592639364964821	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000229	Chromosome_10A	3046	2	55	35.52199606040709	0.57244683177519	1.3387660069848661	55	0	0.6993006993006993	33	0	1.8786902844873858	22	0	0.4820936639118457	39	0	unmethylated (<10%)	O13134	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)	regulation of intracellular pH [GO:0051453]	hit with GO BP
GN000230	Chromosome_10A	1871	5	62	39.925173703901656	0.8345707790152235	0.3464203233256351	62	0	0.3672787979966611	41	0	0.31803725579282144	21	0	1.328206920657113	56	0	unmethylated (<10%)	Q8BTY2	Sodium bicarbonate cotransporter 3 (Solute carrier family 4 member 7)	auditory receptor cell development [GO:0060117]; bicarbonate transport [GO:0015701]; camera-type eye photoreceptor cell differentiation [GO:0060219]; cellular response to growth factor stimulus [GO:0071363]; cochlear nucleus development [GO:0021747]; locomotory exploration behavior [GO:0035641]; phagosome acidification [GO:0090383]; purine nucleotide biosynthetic process [GO:0006164]; pyrimidine nucleotide biosynthetic process [GO:0006221]; regulation of intracellular pH [GO:0051453]; retina vasculature morphogenesis in camera-type eye [GO:0061299]; retinal cell programmed cell death [GO:0046666]; sensory perception of sound [GO:0007605]; visual perception [GO:0007601]	hit with GO BP
GN000231	Chromosome_10A	1144	3	40	45.19230769230769	0.6895720313441832	0.5835764902042517	40	0	0.6118881118881119	38	0	0	2	0	0.7156048014773777	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000232	Chromosome_10A	429	1	18	48.018648018648015	0.7303508937860588	0.5046257359125316	18	0	0.5046257359125316	18	0	NA	NA	NA	0.728460185882944	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000233	Chromosome_10A	1224	3	40	44.44444444444444	0.6650095758119066	0.8620689655172413	40	0	0.8	30	0	1.0526315789473684	10	0	0.8011049723756906	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000234	Chromosome_10A	955	3	31	41.8848167539267	0.7693807011616726	0.23346303501945526	31	0	0.16163793103448276	24	0	0.42016806722689076	7	0	0.37391913998597803	69	0	unmethylated (<10%)	Q8BTY2	Sodium bicarbonate cotransporter 3 (Solute carrier family 4 member 7)	auditory receptor cell development [GO:0060117]; bicarbonate transport [GO:0015701]; camera-type eye photoreceptor cell differentiation [GO:0060219]; cellular response to growth factor stimulus [GO:0071363]; cochlear nucleus development [GO:0021747]; locomotory exploration behavior [GO:0035641]; phagosome acidification [GO:0090383]; purine nucleotide biosynthetic process [GO:0006164]; pyrimidine nucleotide biosynthetic process [GO:0006221]; regulation of intracellular pH [GO:0051453]; retina vasculature morphogenesis in camera-type eye [GO:0061299]; retinal cell programmed cell death [GO:0046666]; sensory perception of sound [GO:0007605]; visual perception [GO:0007601]	hit with GO BP
GN000235	Chromosome_10A	1410	4	42	41.773049645390074	0.6923076923076923	1.0173548773189707	42	0	0.8576329331046312	31	0	1.386138613861386	11	0	0.6454587367450438	51	0	unmethylated (<10%)	Q6RVG2	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)	basolateral protein secretion [GO:0110010]; bicarbonate transport [GO:0015701]; chloride transmembrane transport [GO:1902476]; modulation of chemical synaptic transmission [GO:0050804]; positive regulation of synaptic vesicle exocytosis [GO:2000302]; regulation of intracellular pH [GO:0051453]; regulation of membrane potential [GO:0042391]; regulation of synaptic vesicle exocytosis [GO:2000300]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN000236	Chromosome_10A	5807	11	171	37.1448252109523	0.8537855573095614	0.5468465184104995	171	0	0.458906967042136	80	0	0.6150857882809971	91	0	0.5816066884769174	43	0	unmethylated (<10%)	O13134	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4)	regulation of intracellular pH [GO:0051453]	hit with GO BP
GN000237	Chromosome_10A	195	1	12	50.76923076923077	0.9551020408163265	0.7772020725388601	12	0	0.7772020725388601	12	0	NA	NA	NA	0.5396430053964301	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020013	Chromosome_10A	540	1	23	49.629629629629626	0.7030056036678554	0.5613472333600642	23	0	0.5613472333600642	23	0	NA	NA	NA	3.6833424958768552	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000238	Chromosome_10A	1529	3	49	39.568345323741006	0.8289188351920694	0.8751727314601566	49	0	0.8207934336525308	16	0	0.9027777777777778	33	0	0.8012209080503625	69	0	unmethylated (<10%)	Q8JZR6	Electroneutral sodium bicarbonate exchanger 1 (Electroneutral Na+-driven Cl-HCO3 exchanger) (Solute carrier family 4 member 8) (k-NBC3)	basolateral protein secretion [GO:0110010]; bicarbonate transport [GO:0015701]; chloride transmembrane transport [GO:1902476]; modulation of chemical synaptic transmission [GO:0050804]; positive regulation of synaptic vesicle exocytosis [GO:2000302]; regulation of intracellular pH [GO:0051453]; regulation of membrane potential [GO:0042391]; regulation of synaptic vesicle exocytosis [GO:2000300]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN000239	Chromosome_10A	810	2	32	41.23456790123457	0.9310344827586207	0	32	0	0	25	0	0	7	0	0.8959044368600683	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000240	Chromosome_10A	3843	6	112	37.444704657819415	0.8350717079530638	0.644916540212443	112	0	0.45226130653266333	63	0	0.7617306520414382	49	0	0.36968576709796674	69	0	unmethylated (<10%)	Q9Y6R1	Electrogenic sodium bicarbonate cotransporter 1 (Sodium bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4) (kNBC1)	bicarbonate transport [GO:0015701]; positive regulation of glycolytic process [GO:0045821]; regulation of intracellular pH [GO:0051453]; regulation of membrane potential [GO:0042391]; sodium ion export across plasma membrane [GO:0036376]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN000241	Chromosome_10A	242	2	10	52.06611570247934	0.6097253716301335	0.273972602739726	10	0	0.30303030303030304	9	0	0	1	0	0.4001600640256102	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000242	Chromosome_10A	2752	5	19	33.1031976744186	0.2526869249207454	2.4691358024691357	9	0	0	2	0	2.816901408450704	7	0	0.26755852842809363	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000243	Chromosome_10A	195	1	12	49.743589743589745	0.9948979591836735	1.0660980810234542	12	0	1.0660980810234542	12	0	NA	NA	NA	0.6610009442870632	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000244	Chromosome_10A	13870	21	407	36.344628695025236	0.8892386977909426	0.6030616978506262	397	0	0.5049229992426155	147	0	0.6463835952301349	250	0	1.225243370258476	60	0	unmethylated (<10%)	Q32LP4	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)	bicarbonate transport [GO:0015701]; regulation of intracellular pH [GO:0051453]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; visual perception [GO:0007601]	hit with GO BP
GN000245	Chromosome_10A	19722	15	217	35.31082040361018	0.35367429471312517	72.8468899521531	205	0.8878048780487805	79.05181918412349	42	0.9285714285714286	71.60371106693174	163	0.8773006134969326	47.125621007806956	29	0.3448275862068966	methylated (>=50%)	Q9YH58	Formimidoyltransferase-cyclodeaminase (Formiminotransferase-cyclodeaminase) (FTCD) (p60) [Includes: Glutamate formimidoyltransferase (EC 2.1.2.5) (Glutamate formiminotransferase) (Glutamate formyltransferase); Formimidoyltetrahydrofolate cyclodeaminase (EC 4.3.1.4) (Formiminotetrahydrofolate cyclodeaminase)]	NA	hit, no GO BP
GN000246	Chromosome_10A	2377	4	45	34.58140513251998	0.6350445567185358	93.88025140588819	45	1	94.15855354659249	15	1	93.79340277777777	30	1	90.69319640564827	43	1	methylated (>=50%)	Q9VUK8	Glycine--tRNA ligase (EC 6.1.1.14) (Diadenosine tetraphosphate synthetase) (EC 2.7.7.-) (Glycyl-tRNA synthetase)	dendrite morphogenesis [GO:0048813]; glycyl-tRNA aminoacylation [GO:0006426]; mitochondrial glycyl-tRNA aminoacylation [GO:0070150]	hit with GO BP
GN000247	Chromosome_10A	632	2	7	46.835443037974684	0.20436067997043605	78.87323943661971	4	1	78.87323943661971	4	1	NA	NA	NA	90.29593943565038	42	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000248	Chromosome_10A	14940	11	218	34.77911646586345	0.48914453922864354	91.7834260367528	214	0.9672897196261683	86.79109834888729	29	0.896551724137931	92.32630757220922	185	0.9783783783783784	30.53473263368316	40	0.325	methylated (>=50%)	Q9VUK8	Glycine--tRNA ligase (EC 6.1.1.14) (Diadenosine tetraphosphate synthetase) (EC 2.7.7.-) (Glycyl-tRNA synthetase)	dendrite morphogenesis [GO:0048813]; glycyl-tRNA aminoacylation [GO:0006426]; mitochondrial glycyl-tRNA aminoacylation [GO:0070150]	hit with GO BP
GN000249	Chromosome_10A	15857	11	245	36.47600428832692	0.46561194125015	81.59504265250281	233	0.9227467811158798	82.04419889502762	28	0.8214285714285714	81.53579887046821	205	0.9365853658536586	55.397070161912104	36	0.5	methylated (>=50%)	Q6PEB4	tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial (EC 2.3.1.234) (N6-L-threonylcarbamoyladenine synthase) (t(6)A synthase) (O-sialoglycoprotein endopeptidase-like protein 1) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein Osgepl1) (tRNA threonylcarbamoyladenosine biosynthesis protein Osgepl1)	tRNA threonylcarbamoyladenosine modification [GO:0002949]	hit with GO BP
GN000250	Chromosome_10A	8667	4	143	37.84469828083535	0.46184967781075276	78.009507744211	119	0.8319327731092437	64.83420593368237	28	0.5357142857142857	80.81860465116279	91	0.9230769230769231	0.407955124936257	35	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000251	Chromosome_10A	4266	4	68	34.927332395686825	0.5238808153446902	94.43396226415095	67	1	95.61157796451914	21	1	94.03597349321552	46	1	94.97991967871486	8	1	methylated (>=50%)	Q96IW7	Vesicle-trafficking protein SEC22a (SEC22 vesicle-trafficking protein homolog A) (SEC22 vesicle-trafficking protein-like 2)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN000252	Chromosome_10A	25155	8	560	35.95706618962433	0.6894633122195758	83.5916258836324	553	0.9349005424954792	70.13888888888889	37	0.5675675675675675	84.31305144952447	516	0.9612403100775194	69.83575489576754	51	0.6862745098039216	methylated (>=50%)	Q9BTY2	Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]; regulation of entry of bacterium into host cell [GO:2000535]; response to bacterium [GO:0009617]	hit with GO BP
GN000253	Chromosome_10A	192	1	12	51.5625	0.9411764705882353	52.622673434856175	12	0.8333333333333334	52.622673434856175	12	0.8333333333333334	NA	NA	NA	8.248847926267281	52	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000254	Chromosome_10A	408	1	26	50.245098039215684	1.0116345603662025	62.60387811634349	15	0.7333333333333333	62.60387811634349	15	0.7333333333333333	NA	NA	NA	15.369127516778523	55	0.2	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000255	Chromosome_10A	1632	1	64	43.627450980392155	0.8613557644730332	0.6572769953051644	59	0	0.6572769953051644	59	0	NA	NA	NA	22.490059642147116	58	0.3793103448275862	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000256	Chromosome_10A	1074	1	31	41.06145251396648	0.68963088777497	0.3546099290780142	31	0	0.3546099290780142	31	0	NA	NA	NA	0.6944444444444444	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003039	Chromosome_10A	638	1	34	47.492163009404386	0.94965414587164	90.9090909090909	1	1	90.9090909090909	1	1	NA	NA	NA	81.37404580152672	31	0.967741935483871	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN000257	Chromosome_10A	1623	1	60	43.80776340110906	0.7728571428571429	0.7180156657963447	60	0	0.7180156657963447	60	0	NA	NA	NA	0.5137614678899083	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000258	Chromosome_10A	555	1	14	45.22522522522522	0.49427480916030536	1.2422360248447204	12	0	1.2422360248447204	12	0	NA	NA	NA	0.7466973004020678	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000259	Chromosome_10A	645	1	17	43.25581395348837	0.5643335048893464	0.19627085377821393	17	0	0.19627085377821393	17	0	NA	NA	NA	0.5893186003683242	112	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000260	Chromosome_10A	1519	2	66	46.47794601711652	0.8172458487197671	3.458799593082401	57	0	0.2958579881656805	18	0	5.116279069767442	39	0	7.199546485260771	93	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000261	Chromosome_10A	22391	11	331	36.7424411593944	0.4380187029449189	87.76662484316185	331	0.9697885196374623	95.37177541729893	28	1	87.28926564434708	303	0.966996699669967	88.57630008525149	44	1	methylated (>=50%)	P23330	Tubulin gamma-1 chain (Gamma-1-tubulin) (xGAM)	cytoplasmic microtubule organization [GO:0031122]; meiotic spindle organization [GO:0000212]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; mitotic sister chromatid segregation [GO:0000070]; mitotic spindle organization [GO:0007052]	hit with GO BP
GN000262	Chromosome_10A	38675	7	347	34.50808015513898	0.30538522801779205	66.06517885550657	333	0.7027027027027027	67.38816738816739	15	0.8	66.0221513046743	318	0.6981132075471698	4.2105263157894735	41	0	methylated (>=50%)	Q9GM70	Serine/threonine-protein kinase 17A (EC 2.7.11.1) (DAP kinase-related apoptosis-inducing protein kinase 1) (rDRAK1)	apoptotic process [GO:0006915]; intracellular signal transduction [GO:0035556]; positive regulation of apoptotic process [GO:0043065]; regulation of reactive oxygen species metabolic process [GO:2000377]	hit with GO BP
GN000263	Chromosome_10A	21449	10	352	36.26742505478111	0.5014248344378778	72.1260721717505	348	0.7241379310344828	87.57396449704142	42	0.9523809523809523	70.51670029141448	306	0.6928104575163399	9.136085626911315	51	0	methylated (>=50%)	Q9DBL7	Bifunctional coenzyme A synthase (CoA synthase) [Includes: Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Dephospho-CoA pyrophosphorylase) (Pantetheine-phosphate adenylyltransferase) (PPAT); Dephospho-CoA kinase (DPCK) (EC 2.7.1.24) (Dephosphocoenzyme A kinase) (DPCOAK)]	coenzyme A biosynthetic process [GO:0015937]	hit with GO BP
GN000264	Chromosome_10A	17400	10	207	36.747126436781606	0.35388231040404955	81.6581001332572	183	0.9453551912568307	90.16253207869974	26	1	80.59333833136982	157	0.9363057324840764	97.74647887323944	9	1	methylated (>=50%)	Q969S3	Cytoplasmic 60S subunit biogenesis factor ZNF622 (Zinc finger protein 622) (Zinc finger-like protein 9)	intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; positive regulation of apoptotic process [GO:0043065]; positive regulation of JNK cascade [GO:0046330]; positive regulation of kinase activity [GO:0033674]; positive regulation of MAPK cascade [GO:0043410]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN000265	Chromosome_10A	642	1	28	44.0809968847352	0.8980815347721822	3.0232558139534884	28	0	3.0232558139534884	28	0	NA	NA	NA	4.006024096385542	53	0	unmethylated (<10%)	P32870	Adenylate cyclase 1 (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Ca(2+)/calmodulin-responsive adenylate cyclase) (Protein rutabaga)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; anesthesia-resistant memory [GO:0007615]; associative learning [GO:0008306]; axon extension [GO:0048675]; behavioral response to ethanol [GO:0048149]; cAMP biosynthetic process [GO:0006171]; chemical synaptic transmission [GO:0007268]; circadian rhythm [GO:0007623]; conditioned taste aversion [GO:0001661]; courtship behavior [GO:0007619]; cyclic nucleotide biosynthetic process [GO:0009190]; determination of adult lifespan [GO:0008340]; intracellular signal transduction [GO:0035556]; learning [GO:0007612]; learning or memory [GO:0007611]; mating behavior [GO:0007617]; medium-term memory [GO:0072375]; memory [GO:0007613]; molting cycle, chitin-based cuticle [GO:0007591]; neuromuscular junction development [GO:0007528]; neuromuscular synaptic transmission [GO:0007274]; olfactory learning [GO:0008355]; regulation of olfactory learning [GO:0090328]; response to heat [GO:0009408]; response to oxidative stress [GO:0006979]; short-term memory [GO:0007614]; sleep [GO:0030431]	hit with GO BP
GN000266	Chromosome_10A	14868	7	231	35.351089588377725	0.49909873252904197	85.55619156649495	227	0.933920704845815	56.04026845637584	11	0.45454545454545453	86.71911152244331	216	0.9583333333333334	57.12074303405573	38	0.631578947368421	methylated (>=50%)	P53801	Pituitary tumor-transforming gene 1 protein-interacting protein (Pituitary tumor-transforming gene protein-binding factor) (PBF) (PTTG-binding factor)	negative regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043518]; negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO:1902254]; positive regulation of protein ubiquitination [GO:0031398]; protein import into nucleus [GO:0006606]	hit with GO BP
GN000267	Chromosome_10A	1509	1	42	43.47249834327369	0.5906892213057459	96.6728280961183	42	1	96.6728280961183	42	1	NA	NA	NA	92.47754491017965	39	1	methylated (>=50%)	O43242	26S proteasome non-ATPase regulatory subunit 3 (26S proteasome regulatory subunit RPN3) (26S proteasome regulatory subunit S3) (Proteasome subunit p58)	cellular response to type I interferon [GO:0071357]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of proteasomal protein catabolic process [GO:0061136]; response to oxidative stress [GO:0006979]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN000268	Chromosome_10A	1206	1	49	41.376451077943614	0.9570808499611299	0.45558086560364464	49	0	0.45558086560364464	49	0	NA	NA	NA	0.4937458854509546	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000269	Chromosome_10A	198	1	11	49.494949494949495	0.9465449804432855	0.821917808219178	11	0	0.821917808219178	11	0	NA	NA	NA	0.703125	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000270	Chromosome_10A	6136	3	94	33.53976531942634	0.544805548707515	81.16903633491312	93	0.8709677419354839	56.35658914728682	23	0.6521739130434783	87.51984126984127	70	0.9428571428571428	1.7833259028087383	35	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000271	Chromosome_10A	531	1	18	45.951035781544256	0.6422092320096755	0.4975124378109453	13	0	0.4975124378109453	13	0	NA	NA	NA	0.4230118443316413	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000272	Chromosome_10A	11389	8	187	36.39476688032312	0.498753200719228	86.62487788993813	185	0.8918918918918919	96.14197530864197	10	1	86.0948779649364	175	0.8857142857142857	0.5374280230326296	41	0	methylated (>=50%)	Q63ZL2	Homologous-pairing protein 2 homolog (PSMC3-interacting protein) (Proteasome 26S ATPase subunit 3-interacting protein)	homologous chromosome pairing at meiosis [GO:0007129]; meiotic joint molecule formation [GO:0000709]; meiotic strand invasion involved in reciprocal meiotic recombination [GO:0010774]	hit with GO BP
GN000273	Chromosome_10A	801	1	15	53.433208489388264	0.2631867169017787	3.0303030303030303	3	0	3.0303030303030303	3	0	NA	NA	NA	1.894736842105263	64	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000274	Chromosome_10A	495	1	13	40.80808080808081	0.6310679611650486	0.5128205128205128	13	0	0.5128205128205128	13	0	NA	NA	NA	0.7604562737642585	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000275	Chromosome_10A	1758	1	59	39.419795221843	0.8646958783513405	0.5013927576601671	59	0	0.5013927576601671	59	0	NA	NA	NA	1.2953367875647668	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000276	Chromosome_10A	498	1	16	43.975903614457835	0.6840659340659341	0	1	0	0	1	0	NA	NA	NA	0.7398273736128237	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000277	Chromosome_10A	3588	1	108	40.24526198439242	0.9700137427625205	0.6	48	0	0.6	48	0	NA	NA	NA	0.5309734513274337	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000278	Chromosome_10A	5554	3	169	36.92833993518185	0.894872122445166	0.600375234521576	169	0	0.5502461627570229	84	0	0.6384852487890798	85	0	0.6424792139077853	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000279	Chromosome_10A	23037	13	596	35.54282241611321	0.8191856490195972	0.6213372872978888	591	0	0.5082592121982211	68	0	0.641007929710165	523	0	0.8560558021559924	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000280	Chromosome_10A	787	2	19	34.053367217280815	0.8767002814258912	0.3091190108191654	19	0	0.273224043715847	12	0	0.35587188612099646	7	0	0.7854225573358466	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000281	Chromosome_10A	39503	16	920	35.460597929271195	0.7413991984194259	26.34138345536007	791	0.23893805309734514	20.135983263598327	141	0.18439716312056736	27.9803840309435	650	0.25076923076923074	0.5880047040376323	54	0	sparse (10-50%)	Q6XUX2	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)	cellular response to fibroblast growth factor stimulus [GO:0044344]; negative regulation of apoptotic process [GO:0043066]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of fibroblast growth factor receptor signaling pathway [GO:0045743]; positive regulation of kinase activity [GO:0033674]	hit with GO BP
GN002185	Chromosome_10A	594	1	3	39.225589225589225	0.13170731707317074	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000282	Chromosome_10A	1593	4	54	35.90709353421218	1.0563271320685208	0.9515813042261405	54	0	0.842911877394636	29	0	1.0141093474426808	25	0	1.3287612516073726	45	0	unmethylated (<10%)	Q8JFZ2	Glutathione S-transferase P 1 (EC 2.5.1.18) (GST class-pi) (GST-Pi) (XlGSTP1-1)	glutathione metabolic process [GO:0006749]; neural precursor cell proliferation [GO:0061351]	hit with GO BP
GN000283	Chromosome_10A	17642	13	455	35.3134565242036	0.8280160822925509	2.141291519136739	435	0	1.041938004688721	97	0	2.3535328136786524	338	0	2.8649386084583903	62	0	unmethylated (<10%)	M4DUF2	L-ascorbate oxidase (AAO) (AO) (ASO) (Ascorbase) (EC 1.10.3.3)	L-ascorbic acid catabolic process [GO:0019854]; negative regulation of defense response to virus [GO:0050687]; response to hydrogen peroxide [GO:0042542]; response to jasmonic acid [GO:0009753]; response to virus [GO:0009615]	hit with GO BP
GN000284	Chromosome_10A	4370	3	99	35.10297482837529	0.7354238593306169	73.90818858560795	99	0.8686868686868687	65.45842217484008	9	0.6666666666666666	74.43024634435515	90	0.8888888888888888	1.3157894736842106	53	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000285	Chromosome_10A	312	1	8	59.294871794871796	0.2962962962962963	5.357142857142857	4	0	5.357142857142857	4	0	NA	NA	NA	0.47619047619047616	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000286	Chromosome_10A	555	1	25	47.027027027027025	0.8374577498792853	1.0670731707317074	25	0	1.0670731707317074	25	0	NA	NA	NA	0.5197505197505198	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000287	Chromosome_10A	1925	2	68	38.857142857142854	0.9396984924623115	0.5198776758409785	68	0	0.5434782608695652	52	0	0.4708097928436911	16	0	0.7948639559767655	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000288	Chromosome_10A	441	1	4	48.75283446712018	0.15267439847671802	0.6211180124223602	4	0	0.6211180124223602	4	0	NA	NA	NA	0.5752636625119847	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000289	Chromosome_10A	6087	3	189	36.849022506982095	0.9159286328460877	0.39789224647811594	188	0	0.4699738903394256	32	0	0.37919826652221017	156	0	0.7383100902379	55	0	unmethylated (<10%)	P04464	Calmodulin (CaM)	NA	hit, no GO BP
GN000290	Chromosome_10A	6227	5	104	36.3417375943472	0.5074772829143067	85.73125212080082	104	0.9903846153846154	84.83754512635379	17	1	85.87793798143393	87	0.9885057471264368	87.54976474846181	38	0.9736842105263158	methylated (>=50%)	Q8K0Z7	Translational activator of cytochrome c oxidase 1 (Coiled-coil domain-containing protein 44) (Translational activator of mitochondrially-encoded cytochrome c oxidase 1)	mitochondrial respiratory chain complex IV assembly [GO:0033617]; motor learning [GO:0061743]; positive regulation of mitochondrial translation [GO:0070131]; regulation of cytochrome-c oxidase activity [GO:1904959]; regulation of mitochondrial translation [GO:0070129]	hit with GO BP
GN012203	Chromosome_10A	1100	4	8	34.18181818181818	0.25036986457266414	52.747252747252745	2	1	50	1	1	53.42465753424658	1	1	69.24119241192412	23	0.8260869565217391	NA	NA	NA	NA	no Swiss-Prot hit
GN000291	Chromosome_10A	534	1	16	41.760299625468164	0.7164179104477612	90.92592592592592	16	1	90.92592592592592	16	1	NA	NA	NA	62.41560390097524	20	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000292	Chromosome_10A	2259	1	92	42.62948207171315	0.8968463569986018	0.776156473144986	92	0	0.776156473144986	92	0	NA	NA	NA	0.6307339449541285	48	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN000293	Chromosome_10A	2382	1	110	44.7103274559194	0.9241154562383612	0.6669006669006668	108	0	0.6669006669006668	108	0	NA	NA	NA	0.8166295471417966	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000294	Chromosome_10A	447	1	31	46.085011185682326	1.3061551512866434	0.5030181086519114	31	0	0.5030181086519114	31	0	NA	NA	NA	1.147227533460803	59	0	unmethylated (<10%)	Q7ZSX3	Pancreas transcription factor 1 subunit alpha (Pancreas-specific transcription factor 1a) (bHLH transcription factor p48)	amacrine cell differentiation [GO:0035881]; animal organ morphogenesis [GO:0009887]; cell differentiation [GO:0030154]; developmental process [GO:0032502]; exocrine pancreas development [GO:0031017]; generation of neurons [GO:0048699]; hindbrain development [GO:0030902]; neuron development [GO:0048666]; pancreas development [GO:0031016]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; retinoic acid receptor signaling pathway [GO:0048384]; tissue development [GO:0009888]	hit with GO BP
GN000295	Chromosome_10A	8968	11	206	34.87957181088314	0.7564362727515425	0.4797918191428804	206	0	0.45871559633027525	73	0	0.48742660906170376	133	0	0.4045307443365696	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000296	Chromosome_10A	726	2	0	45.730027548209364	0	NA	0	NA	NA	NA	NA	NA	NA	NA	8.682170542635658	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000297	Chromosome_10A	31377	10	880	38.45173216049973	0.7611763391742152	2.3235210060017146	805	0	1.5953589557650472	83	0	2.3858277488210473	722	0	0.43261231281198004	57	0	unmethylated (<10%)	P31429	Dipeptidase 1 (EC 3.4.13.19) (43 kDa renal band 3-related protein) (Beta-lactamase) (EC 3.5.2.6) (Microsomal dipeptidase)	antibiotic metabolic process [GO:0016999]; cellular response to calcium ion [GO:0071277]; cellular response to nitric oxide [GO:0071732]; glutathione catabolic process [GO:0006751]; homocysteine metabolic process [GO:0050667]; inflammatory response [GO:0006954]; leukotriene D4 catabolic process [GO:1901749]; leukotriene metabolic process [GO:0006691]; negative regulation of cell migration [GO:0030336]; neutrophil chemotaxis [GO:0030593]; proteolysis [GO:0006508]	hit with GO BP
GN000298	Chromosome_10A	153	1	10	48.366013071895424	1.118421052631579	0.3968253968253968	10	0	0.3968253968253968	10	0	NA	NA	NA	0.5978080371969445	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000299	Chromosome_10A	5956	7	179	39.17058428475487	0.7835160344883338	0.5461993627674101	178	0	0.6024096385542169	45	0	0.5297233666862861	133	0	0.5958291956305859	28	0	unmethylated (<10%)	Q3UQ28	Peroxidasin homolog (EC 1.11.2.-) [Cleaved into: PXDN active fragment]	angiogenesis [GO:0001525]; basement membrane assembly [GO:0070831]; basement membrane organization [GO:0071711]; cell adhesion [GO:0007155]; collagen fibril organization [GO:0030199]; extracellular matrix organization [GO:0030198]; eye development [GO:0001654]; hydrogen peroxide catabolic process [GO:0042744]; protein homooligomerization [GO:0051260]; protein homotrimerization [GO:0070207]; response to oxidative stress [GO:0006979]	hit with GO BP
GN000300	Chromosome_10A	6394	12	112	38.145136065060996	0.48157692287000825	28.04101838755304	111	0.34234234234234234	28.050800662617338	78	0.3333333333333333	28.023598820058996	33	0.36363636363636365	0.7828594973217965	48	0	sparse (10-50%)	Q8WWB3	DPY30 domain-containing protein 1	cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN000301	Chromosome_10A	207	1	6	51.207729468599034	0.4421502313990744	31.952662721893493	6	0	31.952662721893493	6	0	NA	NA	NA	40.10507880910683	50	0.28	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000302	Chromosome_10A	3969	5	160	41.8241370622323	0.9311286768101981	0.6392499467291711	160	0	0.7607192254495159	55	0	0.5851555281798583	105	0	1.076194575979337	58	0	unmethylated (<10%)	B5T255	Peptidoglycan recognition protein 1	defense response to Gram-positive bacterium [GO:0050830]; detection of bacterium [GO:0016045]; innate immune response [GO:0045087]; peptidoglycan catabolic process [GO:0009253]	hit with GO BP
GN000303	Chromosome_10A	44722	30	781	37.59000044720719	0.49558472924165803	89.43349103047477	720	0.9791666666666666	92.09685555742391	122	0.9754098360655737	88.98974617582788	598	0.979933110367893	0.47443331576172904	81	0	methylated (>=50%)	B8JKD7	DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6)	neural crest formation [GO:0014029]; transcription elongation by RNA polymerase I [GO:0006362]	hit with GO BP
GN000304	Chromosome_10A	2546	2	84	41.51610369206598	0.7656868712183595	1.0022271714922049	81	0	0.8943543879262158	45	0	1.2154696132596685	36	0	74	40	0.825	unmethylated (<10%)	A0JMH2	Mitochondrial protein C2orf69 homolog	NA	hit, no GO BP
GN000305	Chromosome_10A	7530	7	121	35.61752988047809	0.5069042638419085	93.2778198334595	119	1	93.70915032679738	28	1	93.17970637427987	91	1	88.67924528301887	48	0.9791666666666666	methylated (>=50%)	Q6AYQ6	Cobalamin trafficking protein CblD (CblD) (Methylmalonic aciduria and homocystinuria type D homolog, mitochondrial)	cobalamin metabolic process [GO:0009235]	hit with GO BP
GN000306	Chromosome_10A	673	2	19	39.821693907875186	0.7140782934048138	7.5675675675675675	16	0	7.5675675675675675	16	0	NA	NA	NA	1.6241299303944317	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000307	Chromosome_10A	1218	1	62	41.37931034482759	1.2198888601705866	0.574052812858783	62	0	0.574052812858783	62	0	NA	NA	NA	0.7129714811407544	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000308	Chromosome_10A	2148	1	64	39.10614525139665	0.789633305762338	0.34746351633078526	64	0	0.34746351633078526	64	0	NA	NA	NA	0.40816326530612246	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000309	Chromosome_10A	3243	1	115	39.623805118717236	0.9260974507457053	0.5161579892280072	115	0	0.5161579892280072	115	0	NA	NA	NA	0.6379585326953748	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000310	Chromosome_10A	3691	4	72	36.277431590354915	0.5931699477701888	91.2791943432612	72	1	95.65217391304348	35	1	88.31355627472132	37	1	90.63088512241055	37	1	methylated (>=50%)	Q95245	Transmembrane ascorbate-dependent reductase CYB561 (EC 7.2.1.-) (Cytochrome b-561) (Cytochrome b561)	ascorbate homeostasis [GO:0140576]; intracellular iron ion homeostasis [GO:0006879]	hit with GO BP
GN000311	Chromosome_10A	16595	12	536	36.23983127448027	0.9837528357110247	0.9656089283840045	513	0	0.5385996409335727	99	0	1.0564276622825626	414	0	0.43564356435643564	58	0	unmethylated (<10%)	Q9ERH8	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (mCNT3)	nucleoside transmembrane transport [GO:1901642]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN000312	Chromosome_10A	6503	11	185	36.59849300322928	0.8496901209499426	0.526195378631892	185	0	0.5291005291005291	77	0	0.5245071441490323	108	0	1.1776581426648722	63	0	unmethylated (<10%)	Q9ERH8	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (mCNT3)	nucleoside transmembrane transport [GO:1901642]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN000313	Chromosome_10A	11745	10	257	35.1213282247765	0.7097010451077437	1.0539258738802038	240	0	0.7471490365709792	63	0	1.1421463304308492	177	0	0.6464783940115686	68	0	unmethylated (<10%)	Q9ERH8	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (mCNT3)	nucleoside transmembrane transport [GO:1901642]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN000314	Chromosome_10A	408	2	10	37.990196078431374	0.6827309236947792	0	10	0	0	10	0	NA	NA	NA	0.7623888182973316	54	0	unmethylated (<10%)	P15848	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; lysosomal transport [GO:0007041]; lysosome organization [GO:0007040]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN000315	Chromosome_10A	17018	14	350	33.8171347984487	0.7193751944485777	0.5999435347261434	235	0	0.65058986814712	52	0	0.581095041322314	183	0	0.5159071367153912	46	0	unmethylated (<10%)	P50429	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	anterior head development [GO:0097065]; autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN000316	Chromosome_10A	3774	5	92	36.592474827768946	0.7304905450781388	0.8477769404672193	92	0	0.6582278481012658	29	0	0.9600960096009601	63	0	0.5269186712485682	48	0	unmethylated (<10%)	Q32KH7	Arylsulfatase I (ASI) (EC 3.1.6.-)	NA	hit, no GO BP
GN000317	Chromosome_10A	12643	13	257	34.43802894882544	0.6856509139512325	0.5925076452599388	256	0	0.4791743457427202	52	0	0.6161904028344759	204	0	0.9768009768009768	67	0	unmethylated (<10%)	P50430	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	anterior head development [GO:0097065]; autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN000318	Chromosome_10A	11310	10	188	38.16976127320955	0.46381578947368424	91.62660606590333	185	0.9945945945945946	96.5556831228473	57	1	90.16764839148165	128	0.9921875	36.9179229480737	60	0.38333333333333336	methylated (>=50%)	O01427	Aurora/IPL1-related protein kinase 2 (EC 2.7.11.1) (Serine/threonine-protein kinase aurora-B)	chromosome condensation [GO:0030261]; chromosome segregation [GO:0007059]; establishment of protein localization [GO:0045184]; meiotic spindle midzone assembly [GO:0051257]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; mitotic spindle midzone assembly [GO:0051256]; mitotic spindle organization [GO:0007052]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of mitotic sister chromatid separation [GO:1901970]; regulation of actomyosin contractile ring contraction [GO:0031991]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN000319	Chromosome_10A	1161	2	28	44.530577088716626	0.4870112359550562	34.24543946932007	28	0.07142857142857142	34.33664523670368	27	0.07407407407407407	32.6530612244898	1	0	26.884779516358464	24	0.041666666666666664	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000320	Chromosome_10A	13674	12	210	36.88021061869241	0.45193132439293476	91.24737421226368	203	0.9950738916256158	90.82599864590387	59	0.9830508474576272	91.4241090444413	144	1	74.27835051546391	27	0.7407407407407407	methylated (>=50%)	Q9ERH8	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (mCNT3)	nucleoside transmembrane transport [GO:1901642]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN000321	Chromosome_10A	10298	12	319	39.52223732763643	0.7940937941230433	1.433594806599946	308	0	1.003928415539066	69	0	1.5454545454545454	239	0	3.369935630443014	66	0	unmethylated (<10%)	P13634	Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase I) (Carbonic anhydrase I) (CA-I) (Cyanamide hydratase CA1) (EC 4.2.1.69)	response to fructose [GO:0009750]	hit with GO BP
GN000322	Chromosome_10A	20835	10	368	35.76673866090713	0.5536698987088994	86.54794749602875	364	0.9203296703296703	81.48539246744105	58	0.8620689655172413	87.23020729566909	306	0.9313725490196079	2.0558002936857562	29	0	methylated (>=50%)	Q8IUH3	RNA-binding protein 45 (Developmentally-regulated RNA-binding protein 1) (RB-1) (RNA-binding motif protein 45)	nervous system development [GO:0007399]	hit with GO BP
GN000323	Chromosome_10A	2607	4	68	35.59647103950901	0.8241562064156206	0.6102877070619006	67	0	0.5592841163310962	22	0	0.6281900274833137	45	0	0.8221993833504625	52	0	unmethylated (<10%)	Q008X1	Putative defense protein	defense response to protozoan [GO:0042832]	hit with GO BP
GN000324	Chromosome_10A	273	1	5	42.124542124542124	0.43333333333333335	50.847457627118644	5	0.6	50.847457627118644	5	0.6	NA	NA	NA	47.055758207399684	44	0.45454545454545453	methylated (>=50%)	Q5F389	WW domain-containing oxidoreductase (EC 1.1.1.-)	cellular response to transforming growth factor beta stimulus [GO:0071560]; negative regulation of Wnt signaling pathway [GO:0030178]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN000325	Chromosome_10A	693	1	2	38.81673881673882	0.09449140987182983	26.666666666666668	1	0	26.666666666666668	1	0	NA	NA	NA	36.834016393442624	45	0.17777777777777778	NA	NA	NA	NA	no Swiss-Prot hit
GN000326	Chromosome_10A	282	1	8	46.45390070921986	0.5529411764705883	33.42857142857143	8	0	33.42857142857143	8	0	NA	NA	NA	33.711048158640224	41	0.024390243902439025	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000327	Chromosome_10A	8166	7	147	36.06416850355131	0.5538329940704351	93.529543922714	147	1	93.98176291793312	26	1	93.42703596527491	121	1	56.39300134589502	31	0.41935483870967744	methylated (>=50%)	Q96KC8	DnaJ homolog subfamily C member 1 (DnaJ protein homolog MTJ1)	negative regulation of proteolysis [GO:0045861]; regulation of protein secretion [GO:0050708]	hit with GO BP
GN000328	Chromosome_10A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	66.66666666666667	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN010960	Chromosome_10A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000329	Chromosome_10A	1041	1	34	40.92219020172911	0.784563207944495	0.6596306068601583	34	0	0.6596306068601583	34	0	NA	NA	NA	0.39158100832109644	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000330	Chromosome_10A	811	2	8	36.25154130702836	0.31421929484695854	66.3716814159292	8	0.75	77.05627705627705	4	1	58.98203592814371	4	0.5	87.84878487848785	42	0.9761904761904762	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000331	Chromosome_10A	8458	4	103	40.64790730669189	0.2949196276020782	89.08174692049272	95	0.9894736842105263	88.50174216027875	7	1	89.1324200913242	88	0.9886363636363636	75.7537688442211	27	0.8148148148148148	methylated (>=50%)	Q96KC2	ADP-ribosylation factor-like protein 5B (ADP-ribosylation factor-like protein 8)	intracellular protein transport [GO:0006886]; protein localization to Golgi membrane [GO:1903292]	hit with GO BP
GN000332	Chromosome_10A	2448	1	100	43.13725490196079	0.8785529715762274	0.5185185185185185	100	0	0.5185185185185185	100	0	NA	NA	NA	0.3325942350332594	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000333	Chromosome_10A	599	2	25	44.40734557595993	0.85351952123112	0.9210526315789473	25	0	0.9090909090909091	22	0	1	3	0	0.35398230088495575	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000334	Chromosome_10A	1162	2	61	44.06196213425129	1.082382762991128	0.45146726862302483	57	0	0.4484304932735426	53	0	0.4672897196261682	4	0	0.42643923240938164	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000335	Chromosome_10A	1442	2	51	41.67822468793342	0.8144727224400292	0.5750431282346176	51	0	0.7346189164370982	38	0	0.3076923076923077	13	0	0.8020050125313283	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000336	Chromosome_10A	3193	3	120	37.582211086752274	1.0644072505035072	0.665946724262059	120	0	0.7233273056057866	52	0	0.6415191172696947	68	0	1.2326656394453004	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000337	Chromosome_10A	7447	5	233	43.29260104740164	0.6697356029025784	1.664704893223474	154	0	0.6324110671936759	54	0	1.943613840239214	100	0	0.3223726627981947	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000338	Chromosome_10A	3297	5	115	38.58052775250228	0.9373887460443038	0.63003663003663	115	0	0.6163886874546773	43	0	0.6392918613228424	72	0	0.5649717514124294	63	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN000339	Chromosome_10A	25343	14	387	34.29349327230399	0.5214811455235606	87.22627737226277	384	0.9817708333333334	91.2280701754386	39	1	86.89975274367761	345	0.9797101449275363	12.795828319294023	51	0.19607843137254902	methylated (>=50%)	P49281	Natural resistance-associated macrophage protein 2 (NRAMP 2) (Divalent cation transporter 1) (Divalent metal transporter 1) (DMT-1) (Solute carrier family 11 member 2)	cadmium ion transmembrane transport [GO:0070574]; cellular response to oxidative stress [GO:0034599]; cobalt ion transport [GO:0006824]; copper ion transport [GO:0006825]; detection of oxygen [GO:0003032]; intracellular iron ion homeostasis [GO:0006879]; intracellular manganese ion homeostasis [GO:0030026]; iron import into cell [GO:0033212]; iron ion transmembrane transport [GO:0034755]; iron ion transport [GO:0006826]; lead ion transport [GO:0015692]; manganese ion transport [GO:0006828]; metal ion transport [GO:0030001]; multicellular organismal-level iron ion homeostasis [GO:0060586]; nickel cation transport [GO:0015675]; response to hypoxia [GO:0001666]; response to iron ion [GO:0010039]; vanadium ion transport [GO:0015676]	hit with GO BP
GN000340	Chromosome_10A	18833	9	300	35.453724844687514	0.5111146331905082	86.89584167476977	288	0.9409722222222222	91.9836956521739	27	1	86.42808069452252	261	0.9348659003831418	5.181598062953995	49	0	methylated (>=50%)	Q0P5F0	Lysosomal acid phosphatase (LAP) (EC 3.1.3.2)	lysosome organization [GO:0007040]	hit with GO BP
GN000341	Chromosome_10A	810	1	30	44.69135802469136	0.7418261745581097	4.424778761061947	23	0	4.424778761061947	23	0	NA	NA	NA	1.8013100436681222	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000342	Chromosome_10A	462	1	32	57.142857142857146	0.8800523840704804	0.7334963325183375	32	0	0.7334963325183375	32	0	NA	NA	NA	0.43586550435865506	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000343	Chromosome_10A	489	1	35	55.41922290388548	0.9518909899888766	1.1363636363636365	6	0	1.1363636363636365	6	0	NA	NA	NA	0.471976401179941	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000344	Chromosome_10A	3735	5	108	38.87550200803213	0.7695741758241759	0.4995004995004995	108	0	0.5434782608695652	64	0	0.45454545454545453	44	0	0.48476454293628807	67	0	unmethylated (<10%)	P00176	Cytochrome P450 2B1 (EC 1.14.14.1) (CYPIIB1) (Cytochrome P450-B) (Cytochrome P450b) (Cytochrome P450-LM2) (Cytochrome P450-PB1) (Cytochrome P450-PB2)	epoxygenase P450 pathway [GO:0019373]; response to calcium ion [GO:0051592]; response to insulin [GO:0032868]; response to metal ion [GO:0010038]; response to sulfur dioxide [GO:0010477]; response to xenobiotic stimulus [GO:0009410]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN000345	Chromosome_10A	513	1	5	53.606237816764136	0.1363201530612245	5	2	0	5	2	0	NA	NA	NA	0.963855421686747	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000346	Chromosome_10A	3476	4	71	34.06214039125432	0.7043606567670235	7.273569608524438	70	0	7.062146892655368	19	0	7.342549923195085	51	0	6.980703745743473	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000347	Chromosome_10A	300	1	11	49	0.7189542483660131	8.752025931928687	11	0	8.752025931928687	11	0	NA	NA	NA	7.067879636109168	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000348	Chromosome_10A	14391	26	423	37.57904245709124	0.8367835769521765	0.6228146853146853	418	0	0.4965678399298963	169	0	0.698263070611853	249	0	0.6616257088846881	64	0	unmethylated (<10%)	Q8CG65	SCO-spondin	NA	hit, no GO BP
GN000349	Chromosome_10A	1520	2	48	42.43421052631579	0.7673860911270983	0.746268656716418	48	0	1.1065006915629323	24	0	0.3994673768308921	24	0	0.5263157894736842	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000350	Chromosome_10A	947	2	19	43.71700105596621	0.4795575692963753	1.0452961672473868	19	0	0.5730659025787965	15	0	1.7777777777777777	4	0	0.6551240056153487	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000351	Chromosome_10A	589	2	15	40.57724957555178	0.6648856110776641	0.5449591280653951	15	0	0.6756756756756757	11	0	0.3448275862068966	4	0	0.3776751993285774	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000352	Chromosome_10A	1785	2	48	42.857142857142854	0.6228373702422145	0.5235602094240838	34	0	0.4784688995215311	19	0	0.5494505494505495	15	0	0.30160857908847183	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000353	Chromosome_10A	978	1	33	50.102249488752555	0.6765470400804964	NA	0	NA	NA	NA	NA	NA	NA	NA	0.46439628482972134	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000354	Chromosome_10A	978	1	34	50.102249488752555	0.6938341158059468	0.2386634844868735	19	0	0.2386634844868735	19	0	NA	NA	NA	0	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000355	Chromosome_10A	978	1	33	50.102249488752555	0.6765470400804964	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6024096385542169	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000356	Chromosome_10A	1063	2	37	49.858889934148635	0.6928253095879794	0.3838771593090211	19	0	0.3838771593090211	19	0	NA	NA	NA	0.3436426116838488	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000357	Chromosome_10A	847	2	28	49.468713105076745	0.6609810479375696	0.7905138339920948	11	0	0.7905138339920948	11	0	NA	NA	NA	0.24875621890547264	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000358	Chromosome_10A	978	1	34	50.20449897750511	0.6918851435705369	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4918032786885246	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000359	Chromosome_10A	799	2	26	49.56195244055069	0.649613809062197	0.6802721088435374	8	0	0.6802721088435374	8	0	NA	NA	NA	0.8316008316008316	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000360	Chromosome_10A	1505	2	31	40.79734219269103	0.5213548185231539	0	4	0	NA	NA	NA	0	4	0	0.7776049766718507	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000361	Chromosome_10A	2510	3	56	35.37848605577689	0.7141840944657846	0.5680119581464873	56	0	0.7741935483870968	16	0	0.5058365758754864	40	0	0.8372093023255814	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000362	Chromosome_10A	720	1	18	47.77777777777778	0.5164375373580394	1.5151515151515151	18	0	1.5151515151515151	18	0	NA	NA	NA	0.5950297514875744	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000363	Chromosome_10A	2466	2	76	45.78264395782644	0.6673645977993804	0.6017505470459519	75	0	0.46475600309837334	65	0	0.931098696461825	10	0	0.653289780681288	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000364	Chromosome_10A	1128	2	29	45.656028368794324	0.5482703137570394	1.0434782608695652	26	0	0.8948545861297539	22	0	1.5625	4	0	0.9272816007808687	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000365	Chromosome_10A	1154	2	29	48.26689774696707	0.517408781694496	0.3442340791738382	28	0	0.3937007874015748	26	0	0	2	0	0.4961020552799433	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000366	Chromosome_10A	7491	14	181	39.08690428514217	0.6349042308499161	0.6634669678147939	161	0	0.7864238410596026	76	0	0.5998286203941731	85	0	0	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000367	Chromosome_10A	11658	31	324	39.475038600102934	0.7136422300554505	0.6062355658198614	112	0	0.4370629370629371	50	0	0.6896551724137931	62	0	0.5163511187607573	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000368	Chromosome_10A	12846	34	363	39.54538377705122	0.7231851736972704	0.42321644498186217	74	0	0.43352601156069365	36	0	0.4158004158004158	38	0	0.3786683496371095	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000369	Chromosome_10A	828	3	23	40.45893719806763	0.6788336779068939	0.36991368680641185	23	0	0.5385996409335727	17	0	0	6	0	0.8235294117647058	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000370	Chromosome_10A	7581	3	296	49.2151431209603	0.7545672994473845	0.42452830188679247	125	0	0.4278728606356968	115	0	0.4132231404958678	10	0	0.4649360712901976	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000371	Chromosome_10A	11655	7	273	37.734877734877735	0.6735361326998367	0.500924784217016	261	0	0.5617977528089888	15	0	0.4973907371167645	246	0	0.6925740669488265	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000372	Chromosome_10A	1539	3	59	47.23846653671215	0.7599936388898189	1.0909090909090908	15	0	1.6042780748663101	13	0	0	2	0	0.32858707557502737	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000373	Chromosome_10A	14702	10	222	35.348932118079176	0.4901947355615431	88.69646306534337	222	0.9234234234234234	80.32959326788219	55	0.8545454545454545	90.65866293890305	167	0.9461077844311377	22.502291475710358	27	0.2222222222222222	methylated (>=50%)	A7YT82	Glycylpeptide N-tetradecanoyltransferase 2 (EC 2.3.1.97) (Myristoyl-CoA:protein N-myristoyltransferase 2) (NMT 2) (Peptide N-myristoyltransferase 2) (Type II N-myristoyltransferase)	N-terminal peptidyl-glycine N-myristoylation [GO:0018008]; protein localization to membrane [GO:0072657]	hit with GO BP
GN000374	Chromosome_10A	8454	6	93	33.38064821386326	0.39514679629450933	72.81739130434782	93	0.8279569892473119	78.65168539325843	8	0.875	72.22009202453988	85	0.8235294117647058	16.562190696139886	47	0.19148936170212766	methylated (>=50%)	Q32L26	Calaxin (EF-hand calcium-binding domain-containing protein 1)	cilium movement [GO:0003341]; outer dynein arm assembly [GO:0036158]; regulation of cilium movement [GO:0003352]; regulation of flagellated sperm motility [GO:1901317]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN000375	Chromosome_10A	342	1	17	41.812865497076025	1.1417910447761195	0.8602150537634409	17	0	0.8602150537634409	17	0	NA	NA	NA	5.400098183603339	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000376	Chromosome_10A	4162	5	131	38.03459875060067	0.8704305040694017	0.5945095296380486	131	0	0.19860973187686196	26	0	0.6791171477079796	105	0	1.0960105217010083	37	0	unmethylated (<10%)	Q29497	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (17-alpha-hydroxyprogesterone aldolase) (EC 1.14.14.32) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17) (Steroid 17-alpha-monooxygenase)	glucocorticoid biosynthetic process [GO:0006704]; hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN000377	Chromosome_10A	20734	5	137	33.26420372335295	0.2392024267203318	76.73641069887834	135	0.8518518518518519	70.13815090329437	17	0.7647058823529411	77.48169487456488	118	0.864406779661017	58.516144934680796	63	0.5873015873015873	methylated (>=50%)	Q8K2X2	RNA-binding protein 48	NA	hit, no GO BP
GN000378	Chromosome_10A	528	1	19	41.85606060606061	0.8220255653883972	0.3067484662576687	19	0	0.3067484662576687	19	0	NA	NA	NA	0.9018759018759018	49	0	unmethylated (<10%)	P02637	Sarcoplasmic calcium-binding protein (SCP)	NA	hit, no GO BP
GN000379	Chromosome_10A	864	1	7	49.30555555555556	0.13330982190089932	0	5	0	0	5	0	NA	NA	NA	0.5818181818181818	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000380	Chromosome_10A	19823	16	606	37.01760581143117	0.8938277219426062	0.9802735084109887	539	0	0.7238307349665924	155	0	1.0514921911241688	384	0	0.8038585209003215	45	0	unmethylated (<10%)	P20918	Plasminogen [Cleaved into: Plasmin (EC 3.4.21.7); Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	biological process involved in interaction with symbiont [GO:0051702]; blood coagulation [GO:0007596]; collagen catabolic process [GO:0030574]; extracellular matrix disassembly [GO:0022617]; fibrinolysis [GO:0042730]; labyrinthine layer blood vessel development [GO:0060716]; mononuclear cell migration [GO:0071674]; muscle cell cellular homeostasis [GO:0046716]; myoblast differentiation [GO:0045445]; negative regulation of angiogenesis [GO:0016525]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of fibrinolysis [GO:0051918]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of fibrinolysis [GO:0051919]; protein catabolic process [GO:0030163]; protein processing [GO:0016485]; proteolysis [GO:0006508]; tissue regeneration [GO:0042246]; trans-synaptic signaling by BDNF, modulating synaptic transmission [GO:0099183]; trophoblast giant cell differentiation [GO:0060707]	hit with GO BP
GN000381	Chromosome_10A	31547	35	899	36.688116144165846	0.8469376952612138	1.2555236024409062	898	0	0.7536093923528479	348	0	1.4652743245483175	550	0	0.5081669691470054	48	0	unmethylated (<10%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN000382	Chromosome_10A	10318	6	79	32.42876526458616	0.2932214821836155	92.55603536911372	79	0.9746835443037974	93.97116644823066	13	1	92.29268292682927	66	0.9696969696969697	88.84590586718247	45	0.9555555555555556	methylated (>=50%)	P24668	Cation-dependent mannose-6-phosphate receptor (CD Man-6-P receptor) (CD-MPR) (46 kDa mannose 6-phosphate receptor) (MPR 46)	Golgi to lysosome transport [GO:0090160]; intracellular protein transport [GO:0006886]; lysosomal transport [GO:0007041]; protein targeting to lysosome [GO:0006622]; secretion of lysosomal enzymes [GO:0033299]	hit with GO BP
GN000383	Chromosome_10A	38966	37	496	35.99291690191449	0.39383376448185253	71.4439206987384	483	0.8053830227743272	73.88574054219636	133	0.9022556390977443	70.72974062625991	350	0.7685714285714286	40.02677376171352	42	0.30952380952380953	methylated (>=50%)	Q9Y238	Deleted in lung and esophageal cancer protein 1 (Deleted in lung cancer protein 1) (DLC-1)	defense response to tumor cell [GO:0002357]; negative regulation of cell population proliferation [GO:0008285]; spermatogenesis [GO:0007283]	hit with GO BP
GN000384	Chromosome_10A	4448	4	70	37.76978417266187	0.441429997277924	93.22077922077922	70	1	91.7255297679112	33	1	93.7390696047569	37	1	59.913586173787806	29	0.5517241379310345	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000385	Chromosome_10A	32440	7	873	36.89272503082614	0.7909110407585564	1.2582609448500766	793	0	0.8441558441558441	48	0	1.2775210655069313	745	0	0.532150776053215	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000386	Chromosome_10A	29260	15	476	34.849624060150376	0.5358448196209379	52.1392995803757	448	0.5848214285714286	75.73696145124717	63	0.8888888888888888	48.35009785626508	385	0.535064935064935	80.26315789473684	23	0.8260869565217391	methylated (>=50%)	Q58CQ5	tRNA endonuclease ANKZF1 (EC 3.1.-.-) (Ankyrin repeat and zinc finger domain-containing protein 1)	cellular response to hydrogen peroxide [GO:0070301]; ERAD pathway [GO:0036503]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; rescue of stalled cytosolic ribosome [GO:0072344]	hit with GO BP
GN000387	Chromosome_10A	573	1	27	47.818499127399654	0.8329833629462122	1.2477718360071302	27	0	1.2477718360071302	27	0	NA	NA	NA	0.8995037220843672	60	0	unmethylated (<10%)	Q6DHI5	NAD-dependent protein deacylase sirtuin-5, mitochondrial (EC 2.3.1.-) (Regulatory protein SIR2 homolog 5)	peptidyl-lysine demalonylation [GO:0036047]; peptidyl-lysine desuccinylation [GO:0036049]; protein desuccinylation [GO:0036048]; regulation of ketone biosynthetic process [GO:0010566]	hit with GO BP
GN000388	Chromosome_10A	1218	1	46	40.64039408866995	0.9162986949268963	0.642292490118577	46	0	0.642292490118577	46	0	NA	NA	NA	6.510023712006898	68	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000389	Chromosome_10A	17610	15	215	36.86541737649063	0.36536584786849896	85.38979248457656	215	0.986046511627907	89.73365617433414	65	1	83.61949871718966	150	0.98	86.92098092643052	49	1	methylated (>=50%)	Q5ZM41	Testis-expressed protein 10 homolog	NA	hit, no GO BP
GN000390	Chromosome_10A	392	2	9	40.05102040816327	0.5810276679841897	80.6966618287373	9	1	81.77339901477832	8	1	72.5	1	1	87.09497206703911	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000391	Chromosome_10A	680	3	24	37.794117647058826	0.9917355371900827	0.9074410163339383	24	0	1.0012515644555695	19	0	0.6600660066006601	5	0	0.4268292682926829	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000392	Chromosome_10A	1530	3	19	35.294117647058826	0.4091427284626536	2.1528525296017222	19	0	2.0547945205479454	14	0	2.318840579710145	5	0	0.8508224617129893	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000393	Chromosome_10A	3109	3	28	34.77002251527822	0.2980110232446681	1.1292346298619824	26	0	1.1135857461024499	16	0	1.1494252873563218	10	0	1.7130620985010707	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000394	Chromosome_10A	439	2	13	35.99088838268793	0.9197421434327155	0.36101083032490977	13	0	0.36101083032490977	13	0	NA	NA	NA	0.6814310051107325	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000395	Chromosome_10A	10389	8	256	35.69159688131678	0.7746616878615411	0.6251717504809013	249	0	0.9433962264150944	49	0	0.583203732503888	200	0	0.7460155985079688	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000396	Chromosome_10A	534	1	11	44.00749063670412	0.4737096774193548	18.54043392504931	11	0	18.54043392504931	11	0	NA	NA	NA	21.011513157894736	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000397	Chromosome_10A	14049	5	275	35.26941419318101	0.6294348685876162	13.00350485091685	274	0.01824817518248175	19.463087248322147	10	0	12.749445676274945	264	0.01893939393939394	0.6439742410303588	33	0	sparse (10-50%)	Q99728	BRCA1-associated RING domain protein 1 (BARD-1) (EC 2.3.2.27) (RING-type E3 ubiquitin transferase BARD1)	cellular response to ionizing radiation [GO:0071479]; chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA strand resection involved in replication fork processing [GO:0110025]; homologous recombination [GO:0035825]; mitotic G2/M transition checkpoint [GO:0044818]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell cycle [GO:0045786]; negative regulation of mRNA 3'-end processing [GO:0031441]; negative regulation of protein export from nucleus [GO:0046826]; positive regulation of apoptotic process [GO:0043065]; positive regulation of protein catabolic process [GO:0045732]; protein K6-linked ubiquitination [GO:0085020]; protein ubiquitination [GO:0016567]; regulation of cell cycle [GO:0051726]; regulation of DNA damage checkpoint [GO:2000001]; regulation of DNA repair [GO:0006282]; regulation of phosphorylation [GO:0042325]; regulation of transcription by RNA polymerase II [GO:0006357]; tissue homeostasis [GO:0001894]	hit with GO BP
GN000398	Chromosome_10A	2777	6	31	36.19013323730645	0.3420304019960746	6.995884773662551	31	0	3.203342618384401	26	0	14.247669773635153	5	0	1.0845986984815619	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000399	Chromosome_10A	1044	1	29	37.83524904214559	0.7788238925760148	0.6802721088435374	29	0	0.6802721088435374	29	0	NA	NA	NA	0.5727142564941706	52	0	unmethylated (<10%)	P54131	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000400	Chromosome_10A	1557	5	57	41.23314065510597	0.8617077054528507	2.05159455616494	48	0	2.4138866286954164	39	0	0.970873786407767	9	0	1.7330016583747927	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000401	Chromosome_10A	1472	4	22	36.61684782608695	0.4505662687480869	3.8702702702702703	17	0	4.1765169424743895	11	0	3.4978437949209393	6	0	6.328233657858136	17	0	unmethylated (<10%)	Q6P963	Hydroxyacylglutathione hydrolase, mitochondrial (EC 3.1.2.6) (Glyoxalase II) (Glx II)	glutathione metabolic process [GO:0006749]; methylglyoxal catabolic process [GO:0051596]	hit with GO BP
GN000402	Chromosome_10A	941	2	36	34.43145589798087	1.293223897690399	0.8018327605956472	18	0	0.8670520231213873	16	0	0.35778175313059035	2	0	0.511654349061967	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000403	Chromosome_10A	1020	1	37	39.80392156862745	0.9348989298454221	0.7220216606498195	37	0	0.7220216606498195	37	0	NA	NA	NA	2.0990764063811924	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000404	Chromosome_10A	34103	20	562	36.59795325924406	0.49257688945841666	91.24741904618018	552	0.9873188405797102	93.21833996756597	112	1	90.84145637848836	440	0.9840909090909091	92.99191374663073	37	1	methylated (>=50%)	Q864U1	Breast cancer type 1 susceptibility protein homolog (EC 2.3.2.27) (RING-type E3 ubiquitin transferase BRCA1)	chordate embryonic development [GO:0043009]; DNA repair [GO:0006281]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of fatty acid biosynthetic process [GO:0045717]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autoubiquitination [GO:0051865]; protein K6-linked ubiquitination [GO:0085020]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000405	Chromosome_10A	1377	4	64	42.48366013071895	1.0346576500422655	0.5171299288946348	64	0	0.5710206995003569	60	0	0	4	0	2.6522226372805378	54	0	unmethylated (<10%)	Q8K2I3	Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC 1.14.13.-) (Dimethylaniline oxidase 2) (Pulmonary flavin-containing monooxygenase 2) (FMO 2)	energy homeostasis [GO:0097009]; NADP+ metabolic process [GO:0006739]; negative regulation of fatty acid oxidation [GO:0046322]; oxygen metabolic process [GO:0072592]; sulfur oxidation [GO:0019417]; toxin metabolic process [GO:0009404]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN000406	Chromosome_10A	327	1	16	55.96330275229358	0.6317314658295098	0	6	0	0	6	0	NA	NA	NA	3.0104712041884816	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000407	Chromosome_10A	471	1	28	54.35244161358811	0.8211706102117061	1.0482180293501049	26	0	1.0482180293501049	26	0	NA	NA	NA	0.591715976331361	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000408	Chromosome_10A	38391	21	456	34.979552499283685	0.3911231340082361	87.94145387221853	451	0.9623059866962306	84.16248288452762	42	0.9047619047619048	88.2546527462551	409	0.9682151589242054	0.9626955475330926	59	0	methylated (>=50%)	Q2PZI1	Protein C-mannosyl-transferase DPY19L1 (EC 2.4.1.-) (Dpy-19-like protein 1) (Protein dpy-19 homolog 1)	NA	hit, no GO BP
GN000409	Chromosome_10A	4843	3	147	37.35288044600454	0.8708833351682631	0.5773501110288675	141	0	0.9408602150537635	31	0	0.5323573448677424	110	0	51.580278128950695	52	0.4230769230769231	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000410	Chromosome_10A	2770	4	41	38.014440433213	0.41066417888859963	68.35834068843778	41	0.7073170731707317	56.27906976744186	9	0.6666666666666666	71.18736383442265	32	0.71875	78.73783544677086	45	0.9555555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000411	Chromosome_10A	1882	3	64	39.16046758767269	0.8885741265344664	0.5816554809843401	64	0	0.6912442396313364	49	0	0.20040080160320642	15	0	0.8008008008008008	70	0	unmethylated (<10%)	Q805R1	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M)	NA	hit, no GO BP
GN000412	Chromosome_10A	2648	4	84	37.19788519637462	0.9175329175329175	0.8478168715557439	84	0	1.2485136741973841	43	0	0.6258234519104084	41	0	0.608342989571263	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000413	Chromosome_10A	11036	7	197	35.01268575570859	0.5825622436325479	85.54606326483491	194	0.9381443298969072	81.9082377476538	26	0.8461538461538461	86.17607223476298	168	0.9523809523809523	1.5654351909830932	42	0	methylated (>=50%)	A8WG43	Coiled-coil domain-containing protein 89 (Bc8 orange-interacting protein)	NA	hit, no GO BP
GN000414	Chromosome_10A	27820	14	413	35.83033788641265	0.4627926273220874	87.16083366103028	411	0.9781021897810219	87.93991416309012	48	0.9791666666666666	87.08225108225108	363	0.977961432506887	83.53863381858902	34	0.9705882352941176	methylated (>=50%)	Q802U2	GATOR2 complex protein MIOS	cellular response to amino acid starvation [GO:0034198]; cellular response to nutrient levels [GO:0031669]; heart contraction [GO:0060047]; positive regulation of TORC1 signaling [GO:1904263]; venous blood vessel development [GO:0060841]	hit with GO BP
GN000415	Chromosome_10A	2253	3	52	35.641367066134045	0.7270177354696983	0.8683068017366136	52	0	0.8858267716535433	20	0	0.8581235697940504	32	0	0.7902535396773132	64	0	unmethylated (<10%)	P18613	Ras-related protein rapA (EC 3.6.5.2) (Ras-related protein rap-1)	actomyosin structure organization [GO:0031032]; cellular response to cGMP [GO:0071321]; chemotaxis [GO:0006935]; hyperosmotic response [GO:0006972]; microtubule cytoskeleton organization involved in mitosis [GO:1902850]; mitotic cytokinesis [GO:0000281]; negative regulation of cell migration [GO:0030336]; negative regulation of pinocytosis [GO:0048550]; nucleus organization [GO:0006997]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of phagocytosis [GO:0050766]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; positive regulation of TORC2 signaling [GO:1904515]; Rap protein signal transduction [GO:0032486]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of actin filament polymerization [GO:0030833]; regulation of cell-cell adhesion [GO:0022407]; regulation of myosin II filament assembly [GO:0043520]; regulation of Ras protein signal transduction [GO:0046578]; response to cold [GO:0009409]; small GTPase-mediated signal transduction [GO:0007264]; sorocarp development [GO:0030587]	hit with GO BP
GN000416	Chromosome_10A	1560	1	18	40.44871794871795	0.2820976491862568	1.3664596273291925	18	0	1.3664596273291925	18	0	NA	NA	NA	1.7656500802568218	65	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN000417	Chromosome_10A	951	1	18	42.6919032597266	0.428882820133791	1.639344262295082	18	0	1.639344262295082	18	0	NA	NA	NA	4.303147077713552	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000418	Chromosome_10A	642	1	28	38.940809968847354	1.1523076923076923	1.0036496350364963	28	0	1.0036496350364963	28	0	NA	NA	NA	0.6140765233821446	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000419	Chromosome_10A	1878	1	73	37.80617678381257	1.0900460367817189	0.21567217828900073	47	0	0.21567217828900073	47	0	NA	NA	NA	0.4062681369704005	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000420	Chromosome_10A	1878	1	73	37.69968051118211	1.0959541453821617	0.4066877541798464	71	0	0.4066877541798464	71	0	NA	NA	NA	0.5744125326370757	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000421	Chromosome_10A	996	1	44	43.17269076305221	0.9533381191672649	0.6728343145500421	44	0	0.6728343145500421	44	0	NA	NA	NA	32.708528584817245	72	0.09722222222222222	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000422	Chromosome_10A	789	2	25	43.85297845373891	0.660140562248996	0.20876826722338204	25	0	0.25673940949935814	21	0	0	4	0	0.8687700045724737	39	0	unmethylated (<10%)	P82186	Endoglucanase (EC 3.2.1.4) (CMCase) (Cellulase) (Endo-1,4-beta-glucanase)	NA	hit, no GO BP
GN000423	Chromosome_10A	345	1	9	42.31884057971015	0.5988428158148505	0.49261083743842365	9	0	0.49261083743842365	9	0	NA	NA	NA	0.585058505850585	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000424	Chromosome_10A	17736	10	299	35.554803788903925	0.5360654584330378	84.7897026831037	297	0.8956228956228957	71.02300538423887	37	0.7297297297297297	86.19449577943159	260	0.9192307692307692	4.194630872483222	27	0.037037037037037035	methylated (>=50%)	Q8K4F6	28S rRNA (cytosine-C(5))-methyltransferase (EC 2.1.1.-) (NOL1/NOP2/Sun domain family member 5) (Williams-Beuren syndrome chromosomal region 20A protein homolog)	cerebral cortex development [GO:0021987]; cognition [GO:0050890]; corpus callosum development [GO:0022038]; oligodendrocyte development [GO:0014003]; positive regulation of translation [GO:0045727]; regulation of myelination [GO:0031641]; rRNA base methylation [GO:0070475]	hit with GO BP
GN000425	Chromosome_10A	11132	7	271	36.12109234638879	0.7468647629459741	0.6423311922293592	270	0	0.20376974019358127	49	0	0.7220216606498195	221	0	0.8605851979345955	70	0	unmethylated (<10%)	Q9WYP5	Myo-inositol 2-dehydrogenase (EC 1.1.1.18)	inositol metabolic process [GO:0006020]	hit with GO BP
GN000426	Chromosome_10A	24066	8	498	38.116014294024765	0.5706452290248073	2.1005485730157627	496	0	1.0126582278481013	47	0	2.1806389085622695	449	0	0.2824858757062147	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000427	Chromosome_10A	624	1	6	50.32051282051282	0.26666666666666666	NA	0	NA	NA	NA	NA	NA	NA	NA	0.2824858757062147	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000428	Chromosome_10A	475	2	12	43.1578947368421	0.5472350230414746	88.97058823529412	12	1	89.10034602076125	11	1	88.23529411764706	1	1	79.73568281938326	10	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000429	Chromosome_10A	972	2	4	31.68724279835391	0.16411295428643788	56.80473372781065	4	1	56.80473372781065	4	1	NA	NA	NA	0.8095345176523498	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000430	Chromosome_10A	6650	7	93	36.962406015037594	0.4140830415770307	91.72126265634306	93	1	92.5925925925926	28	1	91.402224030377	65	1	91.21565362198169	35	1	methylated (>=50%)	P51448	Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha) (Nuclear receptor subfamily 1 group F member 1) (RAR-related orphan receptor A) (Retinoid-related orphan receptor-alpha)	angiogenesis [GO:0001525]; cellular response to hypoxia [GO:0071456]; cellular response to interleukin-1 [GO:0071347]; cellular response to sterol [GO:0036315]; cellular response to tumor necrosis factor [GO:0071356]; cerebellar granule cell precursor proliferation [GO:0021930]; cerebellar Purkinje cell differentiation [GO:0021702]; cGMP metabolic process [GO:0046068]; cholesterol homeostasis [GO:0042632]; circadian regulation of gene expression [GO:0032922]; intracellular receptor signaling pathway [GO:0030522]; muscle cell differentiation [GO:0042692]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of inflammatory response [GO:0050728]; nitric oxide biosynthetic process [GO:0006809]; positive regulation of circadian rhythm [GO:0042753]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of vascular endothelial growth factor production [GO:0010575]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of glucose metabolic process [GO:0010906]; regulation of macrophage activation [GO:0043030]; regulation of smoothened signaling pathway [GO:0008589]; regulation of steroid metabolic process [GO:0019218]; regulation of transcription by RNA polymerase II [GO:0006357]; T-helper 17 cell differentiation [GO:0072539]; triglyceride homeostasis [GO:0070328]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN000431	Chromosome_10A	264	2	8	39.39393939393939	0.7836734693877551	0.9836065573770492	8	0	0.9836065573770492	8	0	NA	NA	NA	0.24002400240024002	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000432	Chromosome_10A	402	1	22	46.517412935323385	1.0116678105696637	0.43103448275862066	22	0	0.43103448275862066	22	0	NA	NA	NA	0.4396482813749001	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000433	Chromosome_10A	507	1	25	48.91518737672584	0.8251953125	0	22	0	0	22	0	NA	NA	NA	0.4426410918480266	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000434	Chromosome_10A	8873	4	220	35.410796799278714	0.7910388427846466	1.7692241304910676	220	0	0.7845934379457917	30	0	1.9047619047619047	190	0	0.30234315948601664	52	0	unmethylated (<10%)	Q9Y5X5	Neuropeptide FF receptor 2 (G protein-coupled receptor 74) (G protein-coupled receptor HLWAR77) (Neuropeptide G protein-coupled receptor)	cellular response to hormone stimulus [GO:0032870]; detection of abiotic stimulus [GO:0009582]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]; regulation of MAPK cascade [GO:0043408]	hit with GO BP
GN000435	Chromosome_10A	2834	2	67	32.00423429781228	0.9271748896441268	0.5945575120054882	67	0	0.5063291139240507	20	0	0.6140106056377338	47	0	0.5438066465256798	38	0	unmethylated (<10%)	Q9WVD0	Neuropeptide Y receptor type 1 (NPY1-R)	positive regulation of eating behavior [GO:1904000]	hit with GO BP
GN000436	Chromosome_10A	426	1	16	47.417840375586856	0.6761904761904762	0.37037037037037035	16	0	0.37037037037037035	16	0	NA	NA	NA	3.0889810972798526	39	0.10256410256410256	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000437	Chromosome_10A	3857	4	32	36.14207933627171	0.2590764063811923	78.69098176367724	27	0.9259259259259259	79.86425339366515	9	1	78.35844822058353	18	0.8888888888888888	89.06838987614432	22	1	methylated (>=50%)	Q9DA19	Corepressor of RBPJ and splicing regulator (CBF1-interacting corepressor) (Corepressor interacting with RBPJ 1)	in utero embryonic development [GO:0001701]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN000438	Chromosome_10A	1010	3	27	37.12871287128713	0.7761270491803278	1.1060507482108002	27	0	0.9884678747940692	12	0	1.1827956989247312	15	0	0.6242197253433208	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000439	Chromosome_10A	37855	15	812	35.408796724342885	0.6844376237287337	1.2011173184357542	776	0	0.6788610220629833	102	0	1.2746634091935098	674	0	0.5665168978316077	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000440	Chromosome_10A	846	1	29	42.5531914893617	0.7583691385119471	0.9459459459459459	29	0	0.9459459459459459	29	0	NA	NA	NA	0.9159034138218152	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000441	Chromosome_10A	324	2	4	35.80246913580247	0.3862891207153502	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000442	Chromosome_10A	16166	11	179	36.07571446245206	0.340327555896152	75.10737137347708	178	0.8707865168539326	73.65967365967366	26	0.9230769230769231	75.2914443785813	152	0.8618421052631579	86.44067796610169	42	1	methylated (>=50%)	O43175	D-3-phosphoglycerate dehydrogenase (3-PGDH) (EC 1.1.1.95) (2-oxoglutarate reductase) (EC 1.1.1.399) (Malate dehydrogenase) (EC 1.1.1.37)	brain development [GO:0007420]; L-serine biosynthetic process [GO:0006564]	hit with GO BP
GN000443	Chromosome_10A	8783	7	279	36.172150745758856	0.971147246023002	0.5129666571672842	279	0	0.4551661356395084	55	0	0.5236928794661712	224	0	0.6199628022318661	59	0	unmethylated (<10%)	O57321	Excitatory amino acid transporter 1 (SEAAT1) (Sodium-dependent glutamate/aspartate transporter) (GLAST)	chloride transmembrane transport [GO:1902476]; D-aspartate import across plasma membrane [GO:0070779]; L-aspartate import across plasma membrane [GO:0140009]; L-glutamate import across plasma membrane [GO:0098712]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN000444	Chromosome_10A	555	1	26	43.96396396396396	0.9864643150123051	0.7130124777183601	26	0	0.7130124777183601	26	0	NA	NA	NA	0.44052863436123346	37	0	unmethylated (<10%)	Q8JZR4	Excitatory amino acid transporter 5 (Solute carrier family 1 member 7)	chloride transmembrane transport [GO:1902476]; L-glutamate transmembrane transport [GO:0015813]; monoatomic anion transmembrane transport [GO:0098656]; neurotransmitter uptake [GO:0001504]	hit with GO BP
GN000445	Chromosome_10A	3409	5	105	37.75300674684658	0.8651238670694864	0.5603448275862069	105	0	0.7159904534606205	58	0	0.43222003929273084	47	0	1.7905799922148695	74	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000446	Chromosome_10A	498	1	35	50.200803212851405	1.1837011884550084	0.7142857142857143	35	0	0.7142857142857143	35	0	NA	NA	NA	0.5535055350553506	91	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000447	Chromosome_10A	606	1	22	44.38943894389439	0.7374709591769001	0.9724473257698542	22	0	0.9724473257698542	22	0	NA	NA	NA	0.46258503401360546	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000448	Chromosome_10A	1386	2	42	40.331890331890335	0.7455621301775148	0.48760666395774077	42	0	0.526592943654555	33	0	0.35587188612099646	9	0	0.48746518105849584	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000449	Chromosome_10A	18471	15	535	36.273076714850305	0.8815189302508015	0.7364185110663984	520	0	0.3657049979683056	97	0	0.827980730630269	423	0	0.4860923575479341	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000450	Chromosome_10A	324	2	4	35.80246913580247	0.3862891207153502	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000451	Chromosome_10A	1086	1	47	41.804788213627994	0.9914918414918414	0.6067291781577496	47	0	0.6067291781577496	47	0	NA	NA	NA	0.5598755832037325	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000452	Chromosome_10A	5219	4	166	41.38723893466181	0.7688629471627149	0.4801010739102969	165	0	0.5625	48	0	0.4592240696753761	117	0	1.6020236087689714	39	0	unmethylated (<10%)	A0A1B0GVB3	Putative uncharacterized protein C7orf78	NA	hit, no GO BP
GN000453	Chromosome_10A	243	1	14	48.148148148148145	1.006508875739645	0.7772020725388601	14	0	0.7772020725388601	14	0	NA	NA	NA	2.6798307475317347	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000454	Chromosome_10A	2693	5	70	32.60304493130338	0.9782309748060507	0.49069719893682273	70	0	0.7973421926910299	28	0	0.3544004725339634	42	0	0.5628517823639775	34	0	unmethylated (<10%)	Q08420	Extracellular superoxide dismutase [Cu-Zn] (EC-SOD) (EC 1.15.1.1) (Superoxide dismutase B)	blood vessel diameter maintenance [GO:0097746]; nitric oxide metabolic process [GO:0046209]; removal of superoxide radicals [GO:0019430]; response to copper ion [GO:0046688]; response to hypoxia [GO:0001666]; response to oxidative stress [GO:0006979]	hit with GO BP
GN000455	Chromosome_10A	8373	6	143	34.95760181535889	0.5610773195876289	0.4924592182209911	137	0	0.5913272010512484	39	0	0.47416413373860183	98	0	0.30656039239730226	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000456	Chromosome_10A	3542	6	64	35.77075098814229	0.5666321720133379	90.425	64	0.96875	90.3125	17	1	90.46052631578948	47	0.9574468085106383	58.260159281192564	68	0.6617647058823529	methylated (>=50%)	O73817	Proteasome subunit beta type-3 (Proteasome chain 13) (Proteasome component C10-II) (Proteasome theta chain)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN000457	Chromosome_10A	6855	5	76	35.76951130561634	0.3469972925179583	84.02646502835539	76	0.8947368421052632	94.3089430894309	22	0.9545454545454546	80.91133004926108	54	0.8703703703703703	93.58490566037736	27	1	methylated (>=50%)	P55214	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (ICE-like apoptotic protease 3) (ICE-LAP3) (SREBP cleavage activity 2) (SCA-2) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; lymphocyte apoptotic process [GO:0070227]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; proteolysis [GO:0006508]	hit with GO BP
GN000458	Chromosome_10A	981	1	22	42.91539245667686	0.48852369957897596	0	5	0	0	5	0	NA	NA	NA	0.7604562737642585	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000459	Chromosome_10A	312	1	5	43.26923076923077	0.3424056189640035	18.045112781954888	5	0	18.045112781954888	5	0	NA	NA	NA	16.50099403578529	15	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000460	Chromosome_10A	222	1	5	41.44144144144144	0.5409356725146199	0.625	5	0	0.625	5	0	NA	NA	NA	3.5842293906810037	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000461	Chromosome_10A	915	2	35	38.36065573770492	1.0469107551487413	0.3645833333333333	35	0	0.18975332068311196	15	0	0.43072505384063176	20	0	0.6273525721455459	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000462	Chromosome_10A	14197	12	378	35.65542015918856	0.8411335979084771	0.8413193670603967	372	0	0.7557540364136036	56	0	0.8578838864135133	316	0	0.7400555041628122	45	0	unmethylated (<10%)	P20594	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	activation of meiosis involved in egg activation [GO:0060466]; axonogenesis involved in innervation [GO:0060385]; blood vessel remodeling [GO:0001974]; bone growth [GO:0098868]; c-di-GMP signaling [GO:0061939]; cellular response to cGMP [GO:0071321]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to peptide [GO:1901653]; cGMP biosynthetic process [GO:0006182]; chemical synaptic transmission [GO:0007268]; chondrocyte differentiation [GO:0002062]; chondrocyte proliferation [GO:0035988]; chromosome organization [GO:0051276]; collateral sprouting [GO:0048668]; cumulus cell differentiation [GO:0001549]; digestive tract morphogenesis [GO:0048546]; endochondral ossification [GO:0001958]; epidermal growth factor receptor signaling pathway [GO:0007173]; execution phase of apoptosis [GO:0097194]; female genitalia development [GO:0030540]; gastric emptying [GO:0035483]; genitalia morphogenesis [GO:0035112]; growth plate cartilage development [GO:0003417]; limb morphogenesis [GO:0035108]; lymph vessel development [GO:0001945]; MAPK cascade [GO:0000165]; meiotic cell cycle process involved in oocyte maturation [GO:1903537]; multicellular organism growth [GO:0035264]; neuron apoptotic process [GO:0051402]; neuronal action potential [GO:0019228]; post-anal tail morphogenesis [GO:0036342]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; response to fibroblast growth factor [GO:0071774]; response to luteinizing hormone [GO:0034699]; response to salt [GO:1902074]; sensory perception of sound [GO:0007605]; smooth muscle tissue development [GO:0048745]; spermatogenesis [GO:0007283]; startle response [GO:0001964]; vacuole organization [GO:0007033]; vascular wound healing [GO:0061042]; vasculogenesis [GO:0001570]; vestibulocochlear nerve maturation [GO:0021647]; white fat cell differentiation [GO:0050872]	hit with GO BP
GN000463	Chromosome_10A	10180	4	283	35.854616895874265	0.8653030576079774	0.5480480480480481	275	0	0.4319654427645788	28	0	0.5615623166540944	247	0	0.6676036542515812	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000464	Chromosome_10A	13218	12	353	34.33953699500681	0.9059534895280374	0.7531610775151182	348	0	0.6227907759636425	45	0	0.7786063931140971	303	0	2.0390070921985815	42	0	unmethylated (<10%)	P20594	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	activation of meiosis involved in egg activation [GO:0060466]; axonogenesis involved in innervation [GO:0060385]; blood vessel remodeling [GO:0001974]; bone growth [GO:0098868]; c-di-GMP signaling [GO:0061939]; cellular response to cGMP [GO:0071321]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to peptide [GO:1901653]; cGMP biosynthetic process [GO:0006182]; chemical synaptic transmission [GO:0007268]; chondrocyte differentiation [GO:0002062]; chondrocyte proliferation [GO:0035988]; chromosome organization [GO:0051276]; collateral sprouting [GO:0048668]; cumulus cell differentiation [GO:0001549]; digestive tract morphogenesis [GO:0048546]; endochondral ossification [GO:0001958]; epidermal growth factor receptor signaling pathway [GO:0007173]; execution phase of apoptosis [GO:0097194]; female genitalia development [GO:0030540]; gastric emptying [GO:0035483]; genitalia morphogenesis [GO:0035112]; growth plate cartilage development [GO:0003417]; limb morphogenesis [GO:0035108]; lymph vessel development [GO:0001945]; MAPK cascade [GO:0000165]; meiotic cell cycle process involved in oocyte maturation [GO:1903537]; multicellular organism growth [GO:0035264]; neuron apoptotic process [GO:0051402]; neuronal action potential [GO:0019228]; post-anal tail morphogenesis [GO:0036342]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; response to fibroblast growth factor [GO:0071774]; response to luteinizing hormone [GO:0034699]; response to salt [GO:1902074]; sensory perception of sound [GO:0007605]; smooth muscle tissue development [GO:0048745]; spermatogenesis [GO:0007283]; startle response [GO:0001964]; vacuole organization [GO:0007033]; vascular wound healing [GO:0061042]; vasculogenesis [GO:0001570]; vestibulocochlear nerve maturation [GO:0021647]; white fat cell differentiation [GO:0050872]	hit with GO BP
GN000465	Chromosome_10A	369	1	14	43.360433604336045	0.8153409090909091	0.6535947712418301	14	0	0.6535947712418301	14	0	NA	NA	NA	0.5974025974025974	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000466	Chromosome_10A	369	1	15	43.63143631436314	0.861612702366127	0.70838252656434475	15	0	0.70838252656434475	15	0	NA	NA	NA	0.56118754525706	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000467	Chromosome_10A	423	1	15	49.40898345153664	0.6178188899707887	0.352112676056338	14	0	0.352112676056338	14	0	NA	NA	NA	0.6136475208640157	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000468	Chromosome_10A	231	1	9	45.45454545454545	0.7798199549887472	4.49438202247191	9	0	4.49438202247191	9	0	NA	NA	NA	6.814740030287734	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000469	Chromosome_10A	402	1	14	42.039800995024876	0.8058419243986255	4.746317512274959	14	0	4.746317512274959	14	0	NA	NA	NA	8.36864406779661	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000470	Chromosome_10A	390	1	15	45.8974358974359	0.7341867469879518	6.352459016393443	15	0	6.352459016393443	15	0	NA	NA	NA	8.991228070175438	54	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN000471	Chromosome_10A	10837	5	105	32.878102795976744	0.3603191521701132	52.97627118644068	104	0.5288461538461539	81.05065666041276	15	1	48.2326834680615	89	0.449438202247191	2.172814552804447	51	0	methylated (>=50%)	O14807	Ras-related protein M-Ras (EC 3.6.5.2) (Ras-related protein R-Ras3)	actin cytoskeleton organization [GO:0030036]; establishment or maintenance of cell polarity [GO:0007163]; positive regulation of Ras protein signal transduction [GO:0046579]; positive regulation of TOR signaling [GO:0032008]; Ras protein signal transduction [GO:0007265]	hit with GO BP
GN000472	Chromosome_10A	35889	26	588	36.041684081473434	0.5073290420295342	87.96949201323932	495	0.9434343434343434	88.10810810810811	79	0.9367088607594937	87.94571356317964	416	0.9447115384615384	0.8223096174472649	40	0	methylated (>=50%)	Q9NVE5	Ubiquitin carboxyl-terminal hydrolase 40 (EC 3.4.19.12) (Deubiquitinating enzyme 40) (Ubiquitin thioesterase 40) (Ubiquitin-specific-processing protease 40)	negative regulation of apoptotic process [GO:0043066]; protein deubiquitination [GO:0016579]	hit with GO BP
GN000473	Chromosome_10A	3315	6	71	34.660633484162894	0.7135126777983921	93.61552028218695	48	0.9791666666666666	93.9524838012959	17	1	93.54974704890388	31	0.967741935483871	93.61313868613139	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000474	Chromosome_10A	9059	5	138	35.27983221106082	0.4900396063821781	83.81044487427467	116	0.8362068965517241	12.355212355212355	9	0.1111111111111111	87.57890450010181	107	0.897196261682243	75.27995520716685	48	0.7291666666666666	methylated (>=50%)	Q66IB8	UPF0538 protein C2orf76 homolog	NA	hit, no GO BP
GN000475	Chromosome_10A	6254	3	162	38.80716341541414	0.6902070318620606	0.8006742520016856	143	0	0.7253886010362695	24	0	0.8124796880077998	119	0	0.8936170212765957	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000476	Chromosome_10A	12739	4	359	37.35772038621556	0.8086640716146648	1.0263634534111492	337	0	0.6269592476489029	45	0	1.0637517423519918	292	0	0.4452054794520548	54	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN000477	Chromosome_10A	374	2	15	44.11764705882353	0.825	0.1394700139470014	15	0	0.14619883040935672	14	0	0	1	0	0.7008216529724505	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000478	Chromosome_10A	384	1	14	39.0625	0.9572649572649573	0.9652509652509652	14	0	0.9652509652509652	14	0	NA	NA	NA	0.7141211702372725	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000479	Chromosome_10A	5317	3	140	36.16701147263495	0.8063478307967286	3.61714796070259	138	0	0.4322766570605187	13	0	3.9840637450199203	125	0	1.7241379310344827	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000480	Chromosome_10A	294	1	10	40.816326530612244	0.8223776223776224	0.5277044854881267	10	0	0.5277044854881267	10	0	NA	NA	NA	0.5466870763175159	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000481	Chromosome_10A	4672	7	136	34.28938356164384	0.9912882853648186	0.765759606180774	136	0	0.3994673768308921	41	0	0.9288537549407114	95	0	0.3834682573498083	73	0	unmethylated (<10%)	Q02763	Angiopoietin-1 receptor (EC 2.7.10.1) (Endothelial tyrosine kinase) (Tunica interna endothelial cell kinase) (Tyrosine kinase with Ig and EGF homology domains-2) (Tyrosine-protein kinase receptor TEK) (Tyrosine-protein kinase receptor TIE-2) (hTIE2) (p140 TEK) (CD antigen CD202b)	angiogenesis [GO:0001525]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cell surface receptor signaling pathway [GO:0007166]; cell-cell signaling [GO:0007267]; cellular response to mechanical stimulus [GO:0071260]; definitive hemopoiesis [GO:0060216]; endothelial cell proliferation [GO:0001935]; glomerulus vasculature development [GO:0072012]; heart development [GO:0007507]; heart trabecula formation [GO:0060347]; negative regulation of angiogenesis [GO:0016525]; negative regulation of apoptotic process [GO:0043066]; negative regulation of endothelial cell apoptotic process [GO:2000352]; negative regulation of inflammatory response [GO:0050728]; positive regulation of angiogenesis [GO:0045766]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of focal adhesion assembly [GO:0051894]; positive regulation of intracellular signal transduction [GO:1902533]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of Rho protein signal transduction [GO:0035025]; regulation of endothelial cell apoptotic process [GO:2000351]; regulation of establishment or maintenance of cell polarity [GO:0032878]; regulation of vascular permeability [GO:0043114]; sprouting angiogenesis [GO:0002040]; substrate adhesion-dependent cell spreading [GO:0034446]; Tie signaling pathway [GO:0048014]	hit with GO BP
GN000482	Chromosome_10A	1209	1	41	38.46153846153846	0.917706520531714	0.7822685788787483	41	0	0.7822685788787483	41	0	NA	NA	NA	0.601684717208183	43	0	unmethylated (<10%)	Q07263	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000483	Chromosome_10A	1023	1	47	42.52199413489736	1.0316925585786627	0.3833515881708653	47	0	0.3833515881708653	47	0	NA	NA	NA	0.42514424536896445	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000484	Chromosome_10A	540	1	23	41.48148148148148	1.019453336616597	0.6552006552006552	23	0	0.6552006552006552	23	0	NA	NA	NA	0.7147498375568551	53	0	unmethylated (<10%)	P02637	Sarcoplasmic calcium-binding protein (SCP)	NA	hit, no GO BP
GN000485	Chromosome_10A	609	1	8	38.75205254515599	0.35	0.9569377990430622	8	0	0.9569377990430622	8	0	NA	NA	NA	0.573394495412844	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000486	Chromosome_10A	183	1	6	55.19125683060109	0.4357142857142857	1.0362694300518134	6	0	1.0362694300518134	6	0	NA	NA	NA	0.7777777777777778	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000487	Chromosome_10A	3597	2	111	34.612176814011676	1.0304621848739495	0.5617049396993227	111	0	0.5988023952095808	50	0	0.5383580080753702	61	0	0.6495615459564794	49	0	unmethylated (<10%)	P55102	Inhibin beta A chain (Activin beta-A chain)	activin receptor signaling pathway [GO:0032924]; cell surface receptor protein serine/threonine kinase signaling pathway [GO:0007178]; eyelid development in camera-type eye [GO:0061029]; hair follicle development [GO:0001942]; hematopoietic progenitor cell differentiation [GO:0002244]; hemoglobin biosynthetic process [GO:0042541]; male gonad development [GO:0008584]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; odontogenesis [GO:0042476]; ovarian follicle development [GO:0001541]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of erythrocyte differentiation [GO:0045648]; positive regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001241]; positive regulation of ovulation [GO:0060279]; positive regulation of transcription by RNA polymerase II [GO:0045944]; progesterone secretion [GO:0042701]; regulation of follicle-stimulating hormone secretion [GO:0046880]; regulation of transcription by RNA polymerase II [GO:0006357]; roof of mouth development [GO:0060021]	hit with GO BP
GN000488	Chromosome_10A	1297	4	28	36.160370084811106	0.6610842101430808	0.5792903692976105	28	0	0.7168458781362007	15	0	0.48602673147023084	13	0	0.4326923076923077	41	0	unmethylated (<10%)	Q96GW7	Brevican core protein (Brain-enriched hyaluronan-binding protein) (BEHAB) (Chondroitin sulfate proteoglycan 7)	cell adhesion [GO:0007155]; central nervous system development [GO:0007417]; skeletal system development [GO:0001501]; synapse maturation [GO:0060074]	hit with GO BP
GN000489	Chromosome_10A	49224	31	620	34.3044043555989	0.4303463824681956	79.42427611543481	616	0.8522727272727273	80.65384615384616	92	0.8478260869565217	79.24752584729363	524	0.8530534351145038	0.43494019572308806	50	0	methylated (>=50%)	Q9VUC6	Formin-like protein (Formin related in leukocytes)	axon extension [GO:0048675]; cell migration [GO:0016477]; cortical actin cytoskeleton organization [GO:0030866]; mushroom body development [GO:0016319]; ommatidial rotation [GO:0016318]; regulation of cell shape [GO:0008360]	hit with GO BP
GN000490	Chromosome_10A	1484	4	15	40.700808625336926	0.24575232669824132	4.2586750788643535	15	0	3.7790697674418605	9	0	4.827586206896552	6	0	2.335766423357664	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000491	Chromosome_10A	14304	9	256	35.26286353467562	0.5763389073430082	77.75526526259664	255	0.9490196078431372	90.87378640776699	44	1	76.13656783468105	211	0.9383886255924171	89.70822281167109	30	0.9666666666666667	methylated (>=50%)	Q7ZVB2	4-trimethylaminobutyraldehyde dehydrogenase A (TMABA-DH) (TMABADH) (EC 1.2.1.47) (Aldehyde dehydrogenase family 9 member A1-A) (EC 1.2.1.3)	aldehyde metabolic process [GO:0006081]; carnitine biosynthetic process [GO:0045329]; protein homotetramerization [GO:0051289]	hit with GO BP
GN000492	Chromosome_10A	2156	2	66	34.137291280148425	1.0730007917656375	1.0334054313866858	66	0	0.9125475285171103	33	0	1.0892480674631062	33	0	0.9361009361009361	52	0	unmethylated (<10%)	Q09369	Putative aquaporin-10	innate immune response [GO:0045087]; intracellular water homeostasis [GO:0009992]	hit with GO BP
GN000493	Chromosome_10A	3248	3	31	36.48399014778325	0.2868391515158421	84.32642487046633	31	0.967741935483871	86.21399176954732	12	1	83.4593572778828	19	0.9473684210526315	88.57142857142857	32	0.96875	methylated (>=50%)	G5CTG8	Aquaporin-11 (AQP-11)	NA	hit, no GO BP
GN000494	Chromosome_10A	537	1	21	38.919925512104285	1.0326923076923078	0.5432098765432098	19	0	0.5432098765432098	19	0	NA	NA	NA	0.4105371193978789	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000495	Chromosome_10A	929	2	54	42.08826695371367	1.3163474153765415	0.7456140350877193	54	0	0.7666506947771922	50	0	0.5181347150259067	4	0	0.6530127634312852	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000496	Chromosome_10A	438	3	11	29.22374429223744	1.1774193548387097	0.3510825043885313	9	0	0.1545595054095827	7	0	0.963855421686747	2	0	0.8434547908232118	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000497	Chromosome_10A	1304	2	36	38.65030674846626	0.7505875957341349	0.25220680958385877	29	0	0.2770083102493075	16	0	0.23148148148148148	13	0	0.6342494714587738	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000498	Chromosome_10A	1041	1	33	40.92219020172911	0.7604763907643947	0.5494505494505495	33	0	0.5494505494505495	33	0	NA	NA	NA	0.3229713362939039	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000499	Chromosome_10A	1163	3	30	39.46689595872743	0.6713746921182266	0.2613240418118467	30	0	0.2613240418118467	30	0	NA	NA	NA	0.7155123068116772	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000500	Chromosome_10A	1199	3	31	37.1976647206005	0.7499798224374495	0.5003573981415297	31	0	0.4192872117400419	11	0	0.5422993492407809	20	0	0.5032712632108707	42	0	unmethylated (<10%)	P93732	Proline iminopeptidase (PIP) (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP)	proteolysis [GO:0006508]; response to metal ion [GO:0010038]; response to salt [GO:1902074]; response to water deprivation [GO:0009414]	hit with GO BP
GN000501	Chromosome_10A	153	1	2	45.751633986928105	0.2602040816326531	1.1363636363636365	2	0	1.1363636363636365	2	0	NA	NA	NA	3.289192652712516	56	0	NA	O83041	Probable proline iminopeptidase (PIP) (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP)	proteolysis [GO:0006508]	hit with GO BP
GN000502	Chromosome_10A	1240	2	35	38.54838709677419	0.7646229739252995	0.5882352941176471	35	0	0.5766062602965404	32	0	0.684931506849315	3	0	0.40175310445580714	61	0	unmethylated (<10%)	P54131	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000503	Chromosome_10A	1080	1	26	38.24074074074074	0.6613283089967028	0.5015045135406219	26	0	0.5015045135406219	26	0	NA	NA	NA	0.39156626506024095	56	0	unmethylated (<10%)	P54131	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000504	Chromosome_10A	8560	7	88	36.507009345794394	0.3157154436856492	85.21488792926178	88	0.9090909090909091	87.43109151047409	18	1	84.70677451971689	70	0.8857142857142857	90.8289241622575	38	1	methylated (>=50%)	O83041	Probable proline iminopeptidase (PIP) (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP)	proteolysis [GO:0006508]	hit with GO BP
GN000505	Chromosome_10A	678	1	35	44.8377581120944	1.0271393325542137	0.40431266846361186	34	0	0.40431266846361186	34	0	NA	NA	NA	0.5083514887436456	41	0	unmethylated (<10%)	Q9VGJ5	Protein Fer3 (Basic helix-loop-helix protein N-twist) (Nephew of atonal 3) (Neuronal twist)	developmental process [GO:0032502]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000506	Chromosome_10A	678	1	34	44.985250737463126	0.9917398038203408	0.8088978766430738	34	0	0.8088978766430738	34	0	NA	NA	NA	0.550098231827112	72	0	unmethylated (<10%)	Q9VGJ5	Protein Fer3 (Basic helix-loop-helix protein N-twist) (Nephew of atonal 3) (Neuronal twist)	developmental process [GO:0032502]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000507	Chromosome_10A	627	1	24	44.97607655502392	0.7570558937465413	1.4767932489451476	24	0	1.4767932489451476	24	0	NA	NA	NA	0.6657156443176415	49	0	unmethylated (<10%)	Q923Z4	Fer3-like protein (Basic helix-loop-helix protein N-twist) (Nephew of atonal 3) (Neuronal twist)	cell development [GO:0048468]; developmental process [GO:0032502]; floor plate development [GO:0033504]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of neurogenesis [GO:0050767]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000508	Chromosome_10A	30970	12	320	37.01000968679367	0.30357680834186823	67.61485429581137	273	0.7362637362637363	74.02597402597402	45	0.8444444444444444	66.42866950432514	228	0.7149122807017544	0.5906123717749456	46	0	methylated (>=50%)	Q8HZY8	Coiled-coil domain-containing protein 148	NA	hit, no GO BP
GN000509	Chromosome_10A	357	1	17	43.13725490196079	1.0298659426438146	1.4218009478672986	17	0	1.4218009478672986	17	0	NA	NA	NA	0.774764803541782	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000510	Chromosome_10A	32337	15	484	35.228994650091224	0.48289059257495814	89.4355325860796	462	0.9978354978354979	91.48566463944397	40	1	89.26389292988071	422	0.9976303317535545	88.15635939323221	25	1	methylated (>=50%)	Q9UKG9	Peroxisomal carnitine O-octanoyltransferase (COT) (EC 2.3.1.137)	carnitine metabolic process [GO:0009437]; coenzyme A metabolic process [GO:0015936]; fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid metabolic process [GO:0006631]; generation of precursor metabolites and energy [GO:0006091]; medium-chain fatty acid metabolic process [GO:0051791]	hit with GO BP
GN000511	Chromosome_10A	890	2	32	38.651685393258425	0.964769647696477	0.2588996763754045	32	0	0.21067415730337077	30	0	0.8264462809917356	2	0	17.706040596722914	70	0	unmethylated (<10%)	Q6DBY9	Carbohydrate sulfotransferase 1 (EC 2.8.2.21) (Keratan sulfate Gal-6 sulfotransferase) (KS6ST) (KSGal6ST) (KSST)	carbohydrate metabolic process [GO:0005975]; keratan sulfate proteoglycan metabolic process [GO:0042339]; N-acetylglucosamine metabolic process [GO:0006044]; sulfur compound metabolic process [GO:0006790]	hit with GO BP
GN000512	Chromosome_10A	1146	2	22	39.09249563699826	0.505048076923077	0.8905852417302799	22	0	0.9063444108761329	8	0	0.8791208791208791	14	0	0.6485849056603774	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000513	Chromosome_10A	1476	1	45	37.12737127371274	0.8899309975212701	0.7941009642654566	45	0	0.7941009642654566	45	0	NA	NA	NA	0.6041079339508659	52	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN000514	Chromosome_10A	843	2	19	35.705812574139976	0.7080901856763926	0.5121638924455826	19	0	0.5405405405405406	14	0	0.4424778761061947	5	0	1.2974531475252282	51	0	unmethylated (<10%)	Q9EPW9	Toll-like receptor 6 (CD antigen CD286)	antibacterial innate immune response [GO:0140367]; cellular response to amyloid-beta [GO:1904646]; cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; detection of diacyl bacterial lipopeptide [GO:0042496]; inflammatory response [GO:0006954]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide metabolic process [GO:0046209]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of macrophage activation [GO:0043032]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; response to bacterial lipoprotein [GO:0032493]; toll-like receptor signaling pathway [GO:0002224]; toll-like receptor TLR6:TLR2 signaling pathway [GO:0038124]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]	hit with GO BP
GN000515	Chromosome_10A	396	1	12	42.17171717171717	0.6871023713128976	1.5122873345935728	12	0	1.5122873345935728	12	0	NA	NA	NA	1.3957676722197208	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000516	Chromosome_10A	3969	2	126	35.85285966238347	0.9904812834224599	1.1102423768569194	126	0	0.46879578083797246	75	0	1.8443997317236753	51	0	0.43388901575702216	63	0	unmethylated (<10%)	Q0ZUL9	Toll-like receptor 6 (CD antigen CD286)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; immune response [GO:0006955]; inflammatory response [GO:0006954]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN000517	Chromosome_10A	3011	3	27	34.90534706077715	0.29439435089625204	33.149171270718234	11	0	NA	NA	NA	33.149171270718234	11	0	0.5542725173210161	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000518	Chromosome_10A	2516	4	23	37.95707472178061	0.25390055985538534	4.3478260869565215	6	0	4.3478260869565215	6	0	NA	NA	NA	22.29551451187335	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000519	Chromosome_10A	1115	2	23	35.60538116591928	0.6645504016584607	0.6153846153846154	23	0	0.6122448979591837	14	0	0.6185567010309279	9	0	0.4465614766299494	61	0	unmethylated (<10%)	Q965M2	Leucine-rich repeats and immunoglobulin-like domains protein sma-10	positive regulation of multicellular organism growth [GO:0040018]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; regulation of mesodermal cell fate specification [GO:0042661]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN000520	Chromosome_10A	1141	2	39	38.299737072743206	0.9395506946497192	0.4605263157894737	39	0	0.45248868778280543	35	0	0.5154639175257731	4	0	0.5436893203883495	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000521	Chromosome_10A	243	1	14	49.794238683127574	0.9295081967213115	1.2626262626262625	14	0	1.2626262626262625	14	0	NA	NA	NA	0.7037943696450428	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000522	Chromosome_10A	189	1	12	51.851851851851855	0.9509433962264151	0.26455026455026454	12	0	0.26455026455026454	12	0	NA	NA	NA	1.345029239766082	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000523	Chromosome_10A	393	1	18	40.20356234096692	1.1650197628458498	NA	0	NA	NA	NA	NA	NA	NA	NA	75.75	18	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000524	Chromosome_10A	483	1	7	51.13871635610766	0.23	0.6024096385542169	7	0	0.6024096385542169	7	0	NA	NA	NA	4.713656387665198	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000525	Chromosome_10A	792	1	30	41.666666666666664	0.8727593300029386	1.7653167185877465	30	0	1.7653167185877465	30	0	NA	NA	NA	2.3484848484848486	22	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN000526	Chromosome_10A	1407	1	0	43.63894811656006	0	NA	0	NA	NA	NA	NA	NA	NA	NA	87.76849642004774	29	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000527	Chromosome_10A	1606	4	17	33.25031133250312	0.3829817080013467	3.6904761904761907	17	0	7.5566750629722925	8	0	0.22573363431151242	9	0	6.896551724137931	2	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000528	Chromosome_10A	2092	4	21	33.93881453154876	0.3498216333290865	1.689545934530095	21	0	NA	NA	NA	1.689545934530095	21	0	2.8142589118198873	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000529	Chromosome_10A	276	1	5	42.7536231884058	0.4005805515239477	1.098901098901099	5	0	1.098901098901099	5	0	NA	NA	NA	1.5469613259668509	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000530	Chromosome_10A	546	1	16	43.223443223443226	0.6391571553994733	0.7434944237918215	10	0	0.7434944237918215	10	0	NA	NA	NA	31.677018633540374	26	0.038461538461538464	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000531	Chromosome_10A	12424	6	188	36.284610431423054	0.45995649960664536	81.78305271874137	188	0.8670212765957447	46.231617647058826	22	0.4090909090909091	85.73765463654023	166	0.927710843373494	10.337972166998012	26	0.038461538461538464	methylated (>=50%)	P17164	Tissue alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucosidase I) (Alpha-L-fucoside fucohydrolase 1) (Alpha-L-fucosidase 1)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	hit with GO BP
GN000532	Chromosome_10A	7869	3	118	35.862244249586986	0.4663996479934421	83.40681362725451	118	0.9576271186440678	97.74590163934427	13	1	82.40674574817778	105	0.9523809523809523	94.60352422907489	14	1	methylated (>=50%)	Q5RFI5	Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	hit with GO BP
GN000533	Chromosome_10A	642	1	26	46.88473520249221	0.7605248769819574	0	12	0	0	12	0	NA	NA	NA	0.5185589519650655	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000534	Chromosome_10A	1215	1	51	42.63374485596708	0.933137564942399	0.6230529595015576	51	0	0.6230529595015576	51	0	NA	NA	NA	0.5865102639296188	64	0	unmethylated (<10%)	Q25414	5-hydroxytryptamine receptor (5-HT receptor) (Serotonin receptor)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; positive regulation of MAPK cascade [GO:0043410]	hit with GO BP
GN000535	Chromosome_10A	633	1	28	39.652448657187996	1.1261913839115516	0.535833891493637	28	0	0.535833891493637	28	0	NA	NA	NA	0.9407665505226481	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000536	Chromosome_10A	1619	2	18	37.98641136504015	0.3090874379534173	0.6644518272425249	12	0	0.6644518272425249	12	0	NA	NA	NA	0.767590618336887	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000537	Chromosome_10A	719	2	21	37.83031988873435	0.8185070743210278	0.8631319358816276	21	0	1.411764705882353	16	0	0.25906735751295334	5	0	1.3466717968449404	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000538	Chromosome_10A	1091	2	39	40.23831347387718	0.9126769626769626	0.4972650422675286	39	0	0.5797101449275363	13	0	0.45420136260408783	26	0	0.4771260174010665	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000539	Chromosome_10A	153	1	7	58.169934640522875	0.5526315789473685	0	3	0	0	3	0	NA	NA	NA	1.0878661087866108	101	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000540	Chromosome_10A	540	1	17	55.925925925925924	0.4113456109692163	0	6	0	0	6	0	NA	NA	NA	1.1889862327909888	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000541	Chromosome_10A	552	1	30	44.02173913043478	1.1240836274775998	0.5159071367153912	30	0	0.5159071367153912	30	0	NA	NA	NA	0.5271317829457365	46	0	unmethylated (<10%)	Q8WVJ9	Twist-related protein 2 (Class A basic helix-loop-helix protein 39) (bHLHa39) (Dermis-expressed protein 1) (Dermo-1)	developmental process [GO:0032502]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of cell migration [GO:0030335]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000542	Chromosome_10A	2358	3	80	47.79474130619169	0.6058387127854321	2.670807453416149	69	0	0.5033557046979866	30	0	3.9447731755424065	39	0	0.5422993492407809	92	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000543	Chromosome_10A	1321	2	72	55.26116578349735	0.7156605292661454	0.5938242280285035	48	0	0.398406374501992	43	0	2.247191011235955	5	0	3.4290271132376398	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000544	Chromosome_10A	564	1	25	51.241134751773046	0.6766484307515117	1.4285714285714286	5	0	1.4285714285714286	5	0	NA	NA	NA	0.44340114762649974	68	0	unmethylated (<10%)	P13903	Twist-related protein (T18) (X-twist)	developmental process [GO:0032502]; neural crest formation [GO:0014029]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000545	Chromosome_10A	459	1	13	47.05882352941177	0.5151515151515151	4.1610738255033555	13	0	4.1610738255033555	13	0	NA	NA	NA	2.8047464940668823	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000546	Chromosome_10A	3682	4	91	35.605649103747965	0.7908486241780237	0.8480825958702065	91	0	0.3067484662576687	9	0	0.8952431854623196	82	0	0.4970487729108419	36	0	unmethylated (<10%)	Q6AYB3	Pre-mRNA-splicing factor ISY1 homolog	generation of catalytic spliceosome for second transesterification step [GO:0000350]; mRNA 3'-splice site recognition [GO:0000389]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN000547	Chromosome_10A	225	1	11	51.55555555555556	0.746606334841629	0.32679738562091504	11	0	0.32679738562091504	11	0	NA	NA	NA	0.4889975550122249	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000548	Chromosome_10A	19157	9	242	35.86156496319883	0.39295224488246	83.88861263053208	236	0.9322033898305084	94.16475972540046	35	0.9714285714285714	82.43166517965771	201	0.9253731343283582	87.5	3	1	methylated (>=50%)	Q5F356	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha (EC 2.7.1.149) (1-phosphatidylinositol 5-phosphate 4-kinase 2-alpha) (Diphosphoinositide kinase 2-alpha) (Phosphatidylinositol 5-phosphate 4-kinase type II alpha) (PI(5)P 4-kinase type II alpha) (PIP4KII-alpha) (PtdIns(5)P-4-kinase isoform 2-alpha)	1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process [GO:1902635]; autophagosome-lysosome fusion [GO:0061909]; phosphatidylinositol metabolic process [GO:0046488]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; regulation of autophagy [GO:0010506]; vesicle-mediated cholesterol transport [GO:0090119]	hit with GO BP
GN000549	Chromosome_10A	9892	7	147	36.484027496967244	0.44702196246196485	81.983556012333	146	0.9657534246575342	86.56716417910448	22	1	81.29360293248197	124	0.9596774193548387	89.52333664349553	44	0.9545454545454546	methylated (>=50%)	Q28BT8	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like (EC 1.3.1.89) (mRNA-dihydrouridine synthase DUS3L) (EC 1.3.1.-) (tRNA-dihydrouridine synthase 3-like)	regulation of translation [GO:0006417]; tRNA dihydrouridine synthesis [GO:0002943]	hit with GO BP
GN000550	Chromosome_10A	8099	11	149	34.33757253981973	0.6241406597498784	58.47669690334689	146	0.4931506849315068	74.70506592643997	36	0.75	53.755299818291945	110	0.4090909090909091	28.485601823078518	65	0.015384615384615385	methylated (>=50%)	P08684	Cytochrome P450 3A4 (EC 1.14.14.1) (1,4-cineole 2-exo-monooxygenase) (1,8-cineole 2-exo-monooxygenase) (EC 1.14.14.56) (Albendazole monooxygenase (sulfoxide-forming)) (EC 1.14.14.73) (Albendazole sulfoxidase) (CYPIIIA3) (CYPIIIA4) (Cholesterol 25-hydroxylase) (Cytochrome P450 3A3) (Cytochrome P450 HLp) (Cytochrome P450 NF-25) (Cytochrome P450-PCN1) (Nifedipine oxidase) (Quinine 3-monooxygenase) (EC 1.14.14.55)	aflatoxin metabolic process [GO:0046222]; alkaloid catabolic process [GO:0009822]; cholesterol metabolic process [GO:0008203]; estrogen metabolic process [GO:0008210]; lipid hydroxylation [GO:0002933]; lipid metabolic process [GO:0006629]; long-chain fatty acid biosynthetic process [GO:0042759]; monoterpenoid metabolic process [GO:0016098]; oxidative demethylation [GO:0070989]; retinoic acid metabolic process [GO:0042573]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; steroid metabolic process [GO:0008202]; vitamin D catabolic process [GO:0042369]; vitamin D metabolic process [GO:0042359]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN000551	Chromosome_10A	10636	7	116	34.37382474614517	0.37118380694937714	82.61233603125872	116	0.9741379310344828	88.28956706884316	29	1	81.22285912801806	87	0.9655172413793104	87.16356107660455	34	1	methylated (>=50%)	Q3MHZ8	Galectin-9 (Gal-9)	negative regulation of CD4-positive, alpha-beta T cell proliferation [GO:2000562]; negative regulation of type II interferon production [GO:0032689]; positive regulation of gene expression [GO:0010628]	hit with GO BP
GN000552	Chromosome_10A	2040	1	56	41.029411764705884	0.6531657728327863	0.47745358090185674	56	0	0.47745358090185674	56	0	NA	NA	NA	0.6474820143884892	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000553	Chromosome_10A	12230	11	260	37.46524938675388	0.6072028719828904	2.8380634390651087	260	0	0.40716612377850164	52	0	3.338926174496644	208	0	0.9769094138543517	56	0	unmethylated (<10%)	Q9WU62	Inner centromere protein	chromosome segregation [GO:0007059]; meiotic spindle midzone assembly [GO:0051257]; metaphase chromosome alignment [GO:0051310]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; mitotic spindle midzone assembly [GO:0051256]; mitotic spindle organization [GO:0007052]; positive regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902425]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of mitotic cytokinesis [GO:1903490]; positive regulation of mitotic sister chromatid separation [GO:1901970]; positive regulation of protein phosphorylation [GO:0001934]	hit with GO BP
GN000554	Chromosome_10A	2046	1	54	40.17595307917889	0.6556096866265926	0.5446623093681917	54	0	0.5446623093681917	54	0	NA	NA	NA	3.3310201249132545	44	0	unmethylated (<10%)	A0A913XCT1	Cyclic GMP-AMP synthase-like receptor (Ep-cGLR) (EC 2.7.7.86)	NA	hit, no GO BP
GN000555	Chromosome_10A	908	2	27	37.55506607929515	0.8445638693675073	0.6018916595012898	27	0	0.4452359750667854	26	0	5	1	0	0.5279034690799397	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000556	Chromosome_10A	9334	7	126	34.240411399185774	0.46114521311738954	89.4396551724138	126	0.9841269841269841	93.44457687723481	20	1	89.04158275085891	106	0.9811320754716981	81.17359413202934	34	0.8235294117647058	methylated (>=50%)	Q99KR8	Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]; regulation of entry of bacterium into host cell [GO:2000535]; response to bacterium [GO:0009617]	hit with GO BP
GN000557	Chromosome_10A	1455	1	47	41.3745704467354	0.7634214139790348	0.8350730688935282	23	0	0.8350730688935282	23	0	NA	NA	NA	1.4536340852130325	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000558	Chromosome_10A	5844	5	77	37.18343600273785	0.38191993726161194	80.85358624777712	77	0.8961038961038961	67.62820512820512	8	0.625	82.20117570215545	69	0.927536231884058	1.1546391752577319	55	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000559	Chromosome_10A	885	1	52	43.50282485875706	1.25	0.12368583797155226	52	0	0.12368583797155226	52	0	NA	NA	NA	0.6384676775738228	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000560	Chromosome_10A	3930	5	127	38.62595419847328	0.867117097552628	1.056449069694103	127	0	0.5761843790012804	29	0	1.213389121338912	98	0	0.7190549563430919	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000561	Chromosome_10A	492	1	16	49.390243902439025	0.5339845339845339	1.1811023622047243	16	0	1.1811023622047243	16	0	NA	NA	NA	0.20618556701030927	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000562	Chromosome_10A	1434	1	48	38.98186889818689	0.8903606353805557	0.6412825651302605	48	0	0.6412825651302605	48	0	NA	NA	NA	0.6463878326996197	53	0	unmethylated (<10%)	E1BD59	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]	hit with GO BP
GN000563	Chromosome_10A	1033	3	26	37.85091965150048	0.7030890052356021	0.704225352112676	26	0	0.7312614259597806	25	0	0	1	0	0.9315512353179425	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003901	Chromosome_10A	612	2	7	32.6797385620915	0.4501891551071879	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3992015968063872	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000564	Chromosome_10A	487	2	10	36.75564681724846	0.61489898989899	0.3968253968253968	10	0	0.5305039787798409	8	0	0	2	0	0.8056042031523643	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000565	Chromosome_10A	970	2	44	44.845360824742265	0.9024400558210344	0.5957446808510638	44	0	0.5357142857142857	42	0	1.8181818181818181	2	0	0.7142857142857143	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000566	Chromosome_10A	1404	1	37	37.25071225071225	0.7620137299771167	0.6045949214026602	37	0	0.6045949214026602	37	0	NA	NA	NA	0.5880431231623653	35	0	unmethylated (<10%)	Q6PFY8	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99) (Tripartite motif-containing protein 45)	bone development [GO:0060348]; inflammatory response [GO:0006954]; negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN000567	Chromosome_10A	1434	1	48	40.306834030683405	0.8319373436310236	0.9009009009009009	48	0	0.9009009009009009	48	0	NA	NA	NA	6.542553191489362	51	0.0392156862745098	unmethylated (<10%)	Q9C040	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING finger protein 86) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN000568	Chromosome_10A	16358	11	244	35.089864286587606	0.48497529347166124	87.0028456091589	244	0.9754098360655737	82.01982067012742	43	0.9069767441860465	87.81557881773399	201	0.9900497512437811	2.358700489541611	40	0.025	methylated (>=50%)	Q3MSM3	Succinate-semialdehyde dehydrogenase, mitochondrial (EC 1.2.1.24) (Aldehyde dehydrogenase family 5 member A1) (NAD(+)-dependent succinic semialdehyde dehydrogenase)	central nervous system development [GO:0007417]; GABA catabolic process [GO:0009450]; succinate metabolic process [GO:0006105]	hit with GO BP
GN000569	Chromosome_10A	192	1	12	51.5625	0.9481481481481482	1.203369434416366	12	0	1.203369434416366	12	0	NA	NA	NA	0.7239819004524887	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000570	Chromosome_10A	4466	3	112	35.87102552619794	0.7801883275595562	0.5375942656611663	57	0	0.8846426043878273	14	0	0.4447809217374846	43	0	0.7054132801717528	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000571	Chromosome_10A	213	1	7	43.1924882629108	0.7213352685050798	0.78125	7	0	0.78125	7	0	NA	NA	NA	2.0588235294117645	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000572	Chromosome_10A	306	1	5	40.52287581699346	0.40062843676355064	10.689655172413794	5	0	10.689655172413794	5	0	NA	NA	NA	5.490196078431373	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000573	Chromosome_10A	732	1	35	42.349726775956285	1.0670998375609146	0.5842259006815969	35	0	0.5842259006815969	35	0	NA	NA	NA	0.6756756756756757	56	0	unmethylated (<10%)	P46098	5-hydroxytryptamine receptor 3A (5-HT3-A) (5-HT3A) (5-hydroxytryptamine receptor 3) (5-HT-3) (5-HT3R) (Serotonin receptor 3A) (Serotonin-gated ion channel receptor)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; serotonin receptor signaling pathway [GO:0007210]; serotonin-gated cation-selective signaling pathway [GO:0140227]; transmembrane transport [GO:0055085]	hit with GO BP
GN000574	Chromosome_10A	255	1	8	38.03921568627451	0.8747855917667239	0.35714285714285715	8	0	0.35714285714285715	8	0	NA	NA	NA	0.6996381182147166	47	0	unmethylated (<10%)	Q5IS76	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000575	Chromosome_10A	1065	1	23	43.755868544600936	0.45220425343376164	1.0638297872340425	23	0	1.0638297872340425	23	0	NA	NA	NA	0.5336179295624333	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000576	Chromosome_10A	324	1	11	45.67901234567901	0.6827586206896552	1.5037593984962405	11	0	1.5037593984962405	11	0	NA	NA	NA	0.5192107995846313	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000577	Chromosome_10A	1584	2	57	41.98232323232323	0.8168198595932546	1.9162884518406456	57	0	1.8200728029121165	56	0	5	1	0	2.464381979206777	52	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN000578	Chromosome_10A	4263	6	52	34.57658925639221	0.40985458478548253	78.62380146644107	52	0.8269230769230769	64.5412130637636	12	0.6666666666666666	81.7430244574578	40	0.875	21.46003775959723	33	0.12121212121212122	methylated (>=50%)	Q5F3W2	Insulin-induced gene 2 protein (INSIG-2)	cellular response to insulin stimulus [GO:0032869]; cholesterol biosynthetic process [GO:0006695]; SREBP signaling pathway [GO:0032933]; SREBP-SCAP complex retention in endoplasmic reticulum [GO:0036316]	hit with GO BP
GN000579	Chromosome_10A	5458	2	140	34.75632099670209	0.8497473399523149	0.9280389472082763	136	0	0.8635578583765112	23	0	0.9342676009342676	113	0	1.6337232755143203	89	0	unmethylated (<10%)	P79782	Transcription factor 15 (TCF-15) (Paraxis) (Protein bHLH-EC2)	developmental process [GO:0032502]; negative regulation of hematopoietic stem cell differentiation [GO:1902037]; positive regulation of stem cell differentiation [GO:2000738]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN000580	Chromosome_10A	40229	12	1180	36.85649655720997	0.8637254286538264	0.8405144274709492	1145	0	0.49504950495049505	49	0	0.8559833577737612	1096	0	0.7391304347826086	59	0	unmethylated (<10%)	Q13797	Integrin alpha-9 (Integrin alpha-RLC)	cell adhesion [GO:0007155]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; integrin-mediated signaling pathway [GO:0007229]; negative regulation of vasoconstriction [GO:0045906]	hit with GO BP
GN000581	Chromosome_10A	327	1	4	35.77981651376147	0.4197689345314506	0.6944444444444444	4	0	0.6944444444444444	4	0	NA	NA	NA	0.8885298869143781	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000582	Chromosome_10A	351	2	5	42.16524216524216	0.32142857142857145	0.8403361344537815	5	0	0.6369426751592356	3	0	1.2345679012345678	2	0	1.350337584396099	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000583	Chromosome_10A	27114	9	481	35.863391605812495	0.5518800043060899	58.764961719564354	477	0.6289308176100629	23.097826086956523	26	0.11538461538461539	60.238799266384696	451	0.6585365853658537	1.5527950310559007	46	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000584	Chromosome_10A	651	1	21	38.863287250384026	0.8565789473684211	0.6864988558352403	21	0	0.6864988558352403	21	0	NA	NA	NA	0.4531195538515162	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000585	Chromosome_10A	528	2	9	38.82575757575758	0.4528301886792453	1.6611295681063123	9	0	1.9801980198019802	3	0	1.5	6	0	1.7289459007250418	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000586	Chromosome_10A	327	1	9	39.44954128440367	0.7108695652173913	0.2857142857142857	9	0	0.2857142857142857	9	0	NA	NA	NA	0.7133592736705577	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011273	Chromosome_10A	506	1	18	44.466403162055336	0.7318013819701109	0.746268656716418	18	0	0.746268656716418	18	0	NA	NA	NA	0.8962868117797695	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000587	Chromosome_10A	1209	1	38	38.46153846153846	0.8507777777777777	0.6960556844547564	38	0	0.6960556844547564	38	0	NA	NA	NA	0.9012699713232282	49	0	unmethylated (<10%)	Q8BMN3	Neuronal acetylcholine receptor subunit beta-3	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000588	Chromosome_10A	1191	1	43	39.042821158690174	0.9489863988437164	0.672645739910314	43	0	0.672645739910314	43	0	NA	NA	NA	1.3015184381778742	24	0	unmethylated (<10%)	Q5IS76	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000589	Chromosome_10A	210	1	4	48.095238095238095	0.45454545454545453	1.2195121951219512	4	0	1.2195121951219512	4	0	NA	NA	NA	0.9473684210526315	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000590	Chromosome_10A	951	1	34	41.21976866456362	0.8453996391873873	0.6337135614702155	33	0	0.6337135614702155	33	0	NA	NA	NA	0.5912786400591279	57	0	unmethylated (<10%)	Q15825	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; chemical synaptic transmission [GO:0007268]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to acetylcholine [GO:1905144]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000591	Chromosome_10A	1143	1	44	39.72003499562555	0.9775307106204323	0.8250825082508251	31	0	0.8250825082508251	31	0	NA	NA	NA	1.5945330296127562	33	0	unmethylated (<10%)	P54245	Ligand-gated ion channel 4	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000592	Chromosome_10A	1194	1	50	41.54103852596315	0.9742326082344686	0.7807417046193884	50	0	0.7807417046193884	50	0	NA	NA	NA	2.422522915757311	75	0	unmethylated (<10%)	P04755	Acetylcholine receptor subunit beta-like 1 (Nicotinic acetylcholine receptor beta 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000593	Chromosome_10A	26591	7	455	35.31646045654545	0.550753476183492	78.64302786002212	430	0.8744186046511628	91.13652609006434	55	0.9636363636363636	77.25777689716664	375	0.8613333333333333	19.38144329896907	10	0.1	methylated (>=50%)	P49882	Ecdysone receptor (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) (Ecdysteroid receptor) (Nuclear receptor subfamily 1 group H member 1)	cell differentiation [GO:0030154]; ecdysone receptor signaling pathway [GO:0035076]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN000594	Chromosome_10A	198	1	5	51.515151515151516	0.40293040293040294	65.11627906976744	3	1	65.11627906976744	3	1	NA	NA	NA	79.002079002079	18	0.9444444444444444	NA	NA	NA	NA	no Swiss-Prot hit
GN000595	Chromosome_10A	345	1	8	53.6231884057971	0.3318903318903319	63.63636363636363	1	1	63.63636363636363	1	1	NA	NA	NA	73.01854974704891	16	0.9375	NA	NA	NA	NA	no Swiss-Prot hit
GN000596	Chromosome_10A	225	1	7	56.44444444444444	0.40384615384615385	NA	0	NA	NA	NA	NA	NA	NA	NA	71.7557251908397	20	0.9	NA	NA	NA	NA	no Swiss-Prot hit
GN000597	Chromosome_10A	2932	3	25	35.09549795361528	0.27695074584007134	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000598	Chromosome_10A	2921	3	25	31.87264635398836	0.33753489747998594	40	1	0	NA	NA	NA	40	1	0	1.092896174863388	5	0	NA	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN000599	Chromosome_10A	498	1	18	39.75903614457831	0.9206120981821916	0.11210762331838565	18	0	0.11210762331838565	18	0	NA	NA	NA	0.6568144499178982	51	0	unmethylated (<10%)	Q20561	Helix-loop-helix protein 13 (Fer3-like protein) (Nephew of atonal 3)	dauer exit [GO:0043054]; developmental process [GO:0032502]; regulation of transcription by RNA polymerase II [GO:0006357]; response to oxidative stress [GO:0006979]	hit with GO BP
GN000600	Chromosome_10A	210	1	10	51.42857142857143	0.7223942208462333	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6134969325153374	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000601	Chromosome_10A	1039	2	43	43.118383060635225	0.9228497066842931	1.0727056019070322	30	0	2.6315789473684212	3	0	0.9987515605493134	27	0	0.10416666666666667	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000602	Chromosome_10A	612	2	21	39.37908496732026	0.8852459016393442	0.2178649237472767	17	0	0.24449877750611246	14	0	0	3	0	0.3005259203606311	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000603	Chromosome_10A	2932	3	21	34.85675306957708	0.2358131786063078	70.99567099567099	16	0.9375	73.06273062730628	9	1	63.57615894039735	7	0.8571428571428571	77.41935483870968	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000604	Chromosome_10A	4754	5	44	32.45687841817417	0.3521766068638543	69.33769419460343	22	0.8181818181818182	70.74235807860262	11	0.8181818181818182	69.01408450704226	11	0.8181818181818182	5.036578503095104	84	0	methylated (>=50%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN000605	Chromosome_10A	548	2	25	40.693430656934304	1.103770544634225	0.38412291933418696	25	0	0.2728512960436562	24	0	2.0833333333333335	1	0	0.78031212484994	60	0	unmethylated (<10%)	Q20561	Helix-loop-helix protein 13 (Fer3-like protein) (Nephew of atonal 3)	dauer exit [GO:0043054]; developmental process [GO:0032502]; regulation of transcription by RNA polymerase II [GO:0006357]; response to oxidative stress [GO:0006979]	hit with GO BP
GN000606	Chromosome_10A	6887	6	198	39.65442137360244	0.7316461509900857	29.234757128366955	198	0.19696969696969696	19.068118511015445	86	0.08139534883720931	37.38830219333875	112	0.2857142857142857	1.1015911872705018	55	0	sparse (10-50%)	O42646	Ubiquitin-conjugating enzyme E2 6 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 6) (Ubiquitin carrier protein 6) (Ubiquitin-protein ligase 6)	ERAD pathway [GO:0036503]; inner nuclear membrane-associated protein degradation pathway [GO:0180027]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN000607	Chromosome_10A	2019	1	48	43.536404160475485	0.5039887669665609	90.74174336762317	48	0.9791666666666666	90.74174336762317	48	0.9791666666666666	NA	NA	NA	83.19116909182138	22	0.9545454545454546	methylated (>=50%)	B5X3C1	Galactocerebrosidase (GALCERase) (EC 3.2.1.46) (Galactosylceramidase)	galactosylceramide catabolic process [GO:0006683]	hit with GO BP
GN000608	Chromosome_10A	2457	4	41	35.44973544973545	0.5312628547922665	69.2940666955392	41	0.7073170731707317	86.17332035053553	18	0.9444444444444444	55.77223088923557	23	0.5217391304347826	0.9108653220559532	30	0	methylated (>=50%)	E1B836	Enkurin	establishment of left/right asymmetry [GO:0061966]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN000609	Chromosome_10A	13870	7	239	34.31146359048306	0.5862069575304869	80.06426650927929	238	0.8487394957983193	80.3445575567737	21	0.8095238095238095	80.03864872602348	217	0.8525345622119815	0.8205128205128205	40	0	methylated (>=50%)	Q3U1J1	TCF3 fusion partner homolog (Protein FB1) (Protein amida)	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; chromatin remodeling [GO:0006338]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of telomere maintenance in response to DNA damage [GO:1904507]; regulation of cell cycle [GO:0051726]; regulation of chromosome organization [GO:0033044]; regulation of DNA repair [GO:0006282]; regulation of DNA replication [GO:0006275]; regulation of DNA strand elongation [GO:0060382]; regulation of embryonic development [GO:0045995]; telomere maintenance [GO:0000723]	hit with GO BP
GN000610	Chromosome_10A	15099	10	219	36.247433604874495	0.44157718758037495	81.7902183943402	219	0.9452054794520548	88.54423686993303	69	1	79.90557686633225	150	0.92	91.94991055456171	33	0.9696969696969697	methylated (>=50%)	Q8NEG5	E3 ubiquitin-protein ligase ZSWIM2 (EC 2.3.2.27) (MEKK1-related protein X) (MEX) (RING-type E3 ubiquitin transferase ZSWIM2) (ZZ-type zinc finger-containing protein 2) (Zinc finger SWIM domain-containing protein 2)	protein polyubiquitination [GO:0000209]	hit with GO BP
GN000611	Chromosome_10A	1649	3	26	36.44633110976349	0.4874926092691136	75.12839325018342	26	0.7692307692307693	85.31468531468532	8	0.875	70.44967880085653	18	0.7222222222222222	0.5680025244556642	49	0	methylated (>=50%)	Q6QLW4	Cytochrome c	NA	hit, no GO BP
GN000612	Chromosome_10A	19513	11	354	33.992722800184495	0.6285213737786666	85.83996648512777	352	0.9488636363636364	91.970802919708035	24	1	85.50247116968698	328	0.9451219512195121	47.43651173933876	55	0.5454545454545454	methylated (>=50%)	Q02399	Cyclin-dependent kinase 5 (EC 2.7.11.1) (Cell division protein kinase 5) (Cyclin-dependent-like kinase 5) (Proline-directed protein kinase 33 kDa subunit) (PDPK) (Serine/threonine-protein kinase PSSALRE) (Tau protein kinase II catalytic subunit) (TPKII catalytic subunit)	axonogenesis [GO:0007409]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; neuron apoptotic process [GO:0051402]; neuron differentiation [GO:0030182]; neuron projection development [GO:0031175]; positive regulation of neuron apoptotic process [GO:0043525]; regulation of cell cycle phase transition [GO:1901987]; regulation of cell migration [GO:0030334]; regulation of dendritic spine morphogenesis [GO:0061001]; regulation of synaptic plasticity [GO:0048167]; synaptic vesicle transport [GO:0048489]	hit with GO BP
GN000613	Chromosome_10A	720	1	8	41.388888888888886	0.26329021346619735	0.684931506849315	8	0	0.684931506849315	8	0	NA	NA	NA	0.5826050769870995	54	0	unmethylated (<10%)	Q7ZV90	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; telomere maintenance [GO:0000723]	hit with GO BP
GN000614	Chromosome_10A	471	1	5	39.06581740976645	0.2783687943262411	0	5	0	0	5	0	NA	NA	NA	7.4107683000604965	76	0.02631578947368421	unmethylated (<10%)	P08770	Putative AC transposase (ORFA)	NA	hit, no GO BP
GN000615	Chromosome_10A	412	2	12	39.320388349514566	0.7536585365853659	20.100502512562816	8	0	20.100502512562816	8	0	NA	NA	NA	4.426106526631658	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000616	Chromosome_10A	1098	1	59	45.810564663023676	1.0317247969421883	0.4033509152963078	59	0	0.4033509152963078	59	0	NA	NA	NA	0.6471095772217429	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000617	Chromosome_10A	575	2	19	45.21739130434783	0.6529794991333453	90.89481946624804	19	1	93.17032040472175	18	1	60.22727272727273	1	1	76.27721012883163	47	0.8085106382978723	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000618	Chromosome_10A	2831	6	20	32.779936418226775	0.26583158052884615	73.92277560156687	20	0.95	81.64556962025317	8	1	69.6969696969697	12	0.9166666666666666	46.386946386946384	47	0.3404255319148936	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000619	Chromosome_10A	231	1	3	49.78354978354978	0.20961887477313976	32.394366197183096	3	0	32.394366197183096	3	0	NA	NA	NA	14.936487078405607	31	0.16129032258064516	NA	NA	NA	NA	no Swiss-Prot hit
GN000620	Chromosome_10A	2332	3	101	46.78387650085763	0.7965827690934056	1.4405204460966543	73	0	1.3197969543147208	50	0	1.5424164524421593	23	0	1.479394152870729	59	0	unmethylated (<10%)	P02552	Tubulin alpha-1A chain (EC 3.6.5.-) [Cleaved into: Detyrosinated tubulin alpha-1A chain]	microtubule-based process [GO:0007017]; mitotic cell cycle [GO:0000278]; neuron differentiation [GO:0030182]	hit with GO BP
GN000621	Chromosome_10A	30238	8	703	36.57649315430915	0.6958221565461178	1.5077481502163899	641	0	0.9157509157509157	46	0	1.5361207829827077	595	0	7.775899541173629	80	0	unmethylated (<10%)	P53708	Integrin alpha-8 [Cleaved into: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]	cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; establishment of protein localization [GO:0045184]; integrin-mediated signaling pathway [GO:0007229]; kidney development [GO:0001822]; mesodermal cell differentiation [GO:0048333]; positive regulation of transcription by RNA polymerase II [GO:0045944]; smooth muscle cell differentiation [GO:0051145]; smooth muscle tissue development [GO:0048745]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN000622	Chromosome_10A	285	1	1	37.54385964912281	0.10028149190710767	0	1	0	0	1	0	NA	NA	NA	0.604370060437006	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000623	Chromosome_10A	1272	1	36	39.229559748427675	0.7358508757833843	0.30557677616501144	36	0	0.30557677616501144	36	0	NA	NA	NA	1.585144927536232	43	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000624	Chromosome_10A	1155	1	35	39.22077922077922	0.7881653343731722	0.760777683854607	35	0	0.760777683854607	35	0	NA	NA	NA	0.606323083585968	47	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000625	Chromosome_10A	1155	1	33	39.307359307359306	0.7397379912663755	0.26881720430107525	23	0	0.26881720430107525	23	0	NA	NA	NA	0.68	41	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000626	Chromosome_10A	1176	1	34	39.03061224489796	0.759170653907496	0.34934497816593885	34	0	0.34934497816593885	34	0	NA	NA	NA	0.9352268791132664	65	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000627	Chromosome_10A	768	1	21	38.932291666666664	0.7219983883964545	0.20449897750511248	21	0	0.20449897750511248	21	0	NA	NA	NA	0.36302708740575257	64	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN000628	Chromosome_10A	525	1	11	40.38095238095238	0.5139729441082236	7.590759075907591	11	0.09090909090909091	7.590759075907591	11	0.09090909090909091	NA	NA	NA	0.6701771182383915	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000629	Chromosome_10A	2972	3	53	38.627187079407804	0.47819790828640385	3.868269733403032	53	0	4.203997243280496	43	0	2.813852813852814	10	0	1.5927794000530926	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000630	Chromosome_10A	673	2	24	43.23922734026746	0.7686304368516227	0.7682458386683739	24	0	0.8356545961002786	23	0	0	1	0	5.890227576974565	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000631	Chromosome_10A	10574	4	172	36.570834121429925	0.4868829796233495	84.21227933829243	168	0.9107142857142857	63.8235294117647	40	0.725	87.83836798744606	128	0.96875	58.01781737193764	52	0.6346153846153846	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000632	Chromosome_10A	10967	8	149	34.61292969818547	0.4550825178096994	84.4580322401334	149	0.912751677852349	77.51196172248804	9	0.7777777777777778	84.97848948374761	140	0.9214285714285714	55.96938775510204	36	0.5	methylated (>=50%)	Q9UBI1	COMM domain-containing protein 3 (Protein Bup) (Protein PIL)	endocytic recycling [GO:0032456]; sodium ion transport [GO:0006814]	hit with GO BP
GN000633	Chromosome_10A	897	1	17	47.82608695652174	0.49980334316617503	0.3616636528028933	17	0	0.3616636528028933	17	0	NA	NA	NA	0.5691519635742743	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000634	Chromosome_10A	51993	36	857	36.039466851306905	0.5095734634164104	87.64488935721812	773	0.9611901681759379	86.48366403103088	159	0.9245283018867925	87.82741235783797	614	0.9706840390879479	2.512562814070352	67	0	methylated (>=50%)	F1QJX5	E3 ubiquitin-protein ligase ubr3 (EC 2.3.2.27) (E3 ubiquitin-protein transferase ubr3)	eye morphogenesis [GO:0048592]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the N-end rule pathway [GO:0071596]	hit with GO BP
GN000635	Chromosome_10A	222	1	3	50.9009009009009	0.21764705882352942	66.66666666666667	3	1	66.66666666666667	3	1	NA	NA	NA	40.37735849056604	35	0.45714285714285713	NA	NA	NA	NA	no Swiss-Prot hit
GN000636	Chromosome_10A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000637	Chromosome_10A	975	1	47	41.53846153846154	1.1176829268292683	0.9029345372460497	47	0	0.9029345372460497	47	0	NA	NA	NA	13.680555555555555	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000638	Chromosome_10A	23721	6	577	37.29185110239872	0.7038983536451496	2.0414162529396394	577	0	0.8398950131233596	43	0	2.12113823969907	534	0	0.5177514792899408	57	0	unmethylated (<10%)	O70497	Ficolin-2 (Collagen/fibrinogen domain-containing protein 2) (Ficolin-B) (Ficolin-beta) (L-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; host-mediated suppression of symbiont invasion [GO:0046597]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of opsonization [GO:1903028]; protein localization to cell surface [GO:0034394]; proteolysis [GO:0006508]; recognition of apoptotic cell [GO:0043654]	hit with GO BP
GN000639	Chromosome_10A	19982	14	435	35.01151035932339	0.7123048001783185	0.6753093113816729	435	0	0.6734006734006734	66	0	0.6755989553764051	369	0	0.6458191706322229	73	0	unmethylated (<10%)	Q9C6W5	ABC transporter G family member 14 (ABC transporter ABCG.14) (AtABCG14) (Protein INSENSITIVE TO TEMPERATURE 211) (White-brown complex homolog protein 14) (AtWBC14)	cotyledon vascular tissue pattern formation [GO:0010588]; cytokinin transport [GO:0010184]; cytokinin-activated signaling pathway [GO:0009736]; defense response to bacterium [GO:0042742]; export across plasma membrane [GO:0140115]; export from cell [GO:0140352]; response to hydrogen peroxide [GO:0042542]; stem vascular tissue pattern formation [GO:0010222]	hit with GO BP
GN000640	Chromosome_10A	355	2	15	41.40845070422535	1.0201149425287357	0	15	0	0	13	0	0	2	0	0.6028131279303416	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000641	Chromosome_10A	423	1	17	42.31678486997636	0.910253164556962	1	17	0	1	17	0	NA	NA	NA	0.5459890802183957	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000642	Chromosome_10A	341	2	12	42.81524926686217	0.8017241379310345	0.7957559681697612	12	0	0.7320644216691069	11	0	1.408450704225352	1	0	1.3917077413743113	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000643	Chromosome_10A	438	2	18	37.44292237442922	1.1726907630522088	0.5108556832694764	18	0	0.2861230329041488	16	0	2.380952380952381	2	0	0.430828147438966	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000644	Chromosome_10A	17479	14	463	34.10950283196979	0.9115646419416671	0.7823463373561605	463	0	0.4410143329658214	111	0	0.8628913363975371	352	0	0.6150857882809971	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000645	Chromosome_10A	1455	3	48	35.4639175257732	1.0617208878078443	0.41872858774267224	48	0	0.35561877667140823	31	0	0.4914004914004914	17	0	0.5961251862891207	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000646	Chromosome_10A	899	3	20	35.37263626251391	0.7112341772151899	0	7	0	0	5	0	0	2	0	0.49367479173094725	23	0	unmethylated (<10%)	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN000647	Chromosome_10A	324	2	4	35.49382716049383	0.3927272727272727	87.15083798882682	4	1	87.15083798882682	4	1	NA	NA	NA	54.232804232804234	9	0.5555555555555556	NA	NA	NA	NA	no Swiss-Prot hit
GN001857	Chromosome_10A	282	1	5	40.42553191489362	0.4710992315402606	0.9463722397476341	5	0	0.9463722397476341	5	0	NA	NA	NA	2.9986962190352022	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000648	Chromosome_10A	747	2	12	31.593038821954483	0.6494240382525538	0.27816411682892905	12	0	0	7	0	0.6006006006006006	5	0	0.5586592178770949	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000649	Chromosome_10A	1525	2	22	39.40983606557377	0.3719099878062299	0.30120481927710846	22	0	0.30120481927710846	22	0	NA	NA	NA	0.57636887608069165	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000650	Chromosome_10A	1533	1	49	39.00848010437051	0.840987460815047	0.6940736785904965	49	0	0.6940736785904965	49	0	NA	NA	NA	0.604982206405694	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000651	Chromosome_10A	11094	13	251	34.6854155399315	0.7527201216421693	0.42190796155949684	250	0	0.7054673721340388	48	0	0.36083942645522743	202	0	0.4770423375074538	40	0	unmethylated (<10%)	A8KBL5	Putative sodium-coupled neutral amino acid transporter 11 (Solute carrier family 38 member 11)	amino acid transmembrane transport [GO:0003333]	hit with GO BP
GN000652	Chromosome_10A	336	1	2	46.13095238095238	0.11440245148110317	0	2	0	0	2	0	NA	NA	NA	0.6683375104427736	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000653	Chromosome_10A	1057	3	6	33.58561967833491	0.2052028732284993	0.9727626459143969	6	0	0.7633587786259542	3	0	1.1904761904761905	3	0	0.6350886477904207	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000654	Chromosome_10A	1189	2	41	43.2296047098402	0.739192406253317	2.1256931608133085	41	0	2.0761245674740483	8	0	2.1437578814627996	33	0	0.8557980316645272	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000655	Chromosome_10A	1915	3	39	36.91906005221932	0.5976903870162297	1.0804321728691477	33	0	0.22573363431151242	20	0	2.051282051282051	13	0	2.022577610536218	72	0	unmethylated (<10%)	Q8TEB9	Rhomboid-related protein 4 (RRP4) (EC 3.4.21.105) (Rhomboid domain-containing protein 1) (Rhomboid-like protein 4)	cellular response to unfolded protein [GO:0034620]; cellular response to UV [GO:0034644]; ERAD pathway [GO:0036503]; membrane protein intracellular domain proteolysis [GO:0031293]; membrane protein proteolysis [GO:0033619]; negative regulation of apoptotic process [GO:0043066]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein processing [GO:0010954]; positive regulation of secretion [GO:0051047]; post-translational protein modification [GO:0043687]; retrograde protein transport, ER to cytosol [GO:0030970]; spermatid differentiation [GO:0048515]	hit with GO BP
GN003212	Chromosome_10A	243	1	7	44.44444444444444	0.5964235624123422	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015669	Chromosome_10A	530	1	5	36.41509433962264	0.2954292084726867	85	5	1	85	5	1	NA	NA	NA	70.38327526132404	11	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002664	Chromosome_10A	207	1	6	51.690821256038646	0.4339622641509434	17.277486910994764	6	0	17.277486910994764	6	0	NA	NA	NA	2.0242914979757085	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000656	Chromosome_10A	4427	3	137	37.04540320758979	0.9043639172367722	1.5619324373410826	128	0	0.8928571428571429	24	0	1.754796443612541	104	0	0.5022601707684581	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000657	Chromosome_10A	624	1	14	40.544871794871796	0.5513063233623627	0.4065040650406504	10	0	0.4065040650406504	10	0	NA	NA	NA	1.6042780748663101	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000658	Chromosome_10A	2486	2	77	37.892196299275945	0.8649418016194332	0.48496605237633367	77	0	0.7552870090634441	17	0	0.41135335252982314	60	0	0.7653061224489796	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000659	Chromosome_10A	2339	4	90	41.12868747327918	0.9139217754854844	0.5680119581464873	90	0	0.6568144499178982	59	0	0.461133069828722	31	0	0.8305647840531561	40	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN000660	Chromosome_10A	900	1	6	52.111111111111114	0.09874917709019092	3.5714285714285716	2	0	3.5714285714285716	2	0	NA	NA	NA	0.6825938566552902	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000661	Chromosome_10A	574	2	28	37.63066202090592	1.395138888888889	0.4132231404958678	28	0	0.3913894324853229	17	0	0.437636761487965	11	0	0.5390835579514824	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000662	Chromosome_10A	1028	5	6	30.544747081712064	0.2535662898252826	57.142857142857146	1	1	57.142857142857146	1	1	NA	NA	NA	47.6271186440678	12	0.4166666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN000663	Chromosome_10A	510	1	9	40.98039215686274	0.44920728126834997	1.5075376884422111	9	0	1.5075376884422111	9	0	NA	NA	NA	0.6282722513089005	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000664	Chromosome_10A	793	2	12	36.69609079445145	0.4577200577200577	2.4054982817869415	12	0	2.5454545454545454	11	0	0	1	0	16.70345842531273	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000665	Chromosome_10A	330	1	7	37.878787878787875	0.630114566284779	0.4484304932735426	7	0	0.4484304932735426	7	0	NA	NA	NA	6.575682382133995	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000666	Chromosome_10A	36161	11	618	33.84309062249385	0.5986589342168939	60.576826851870386	598	0.7474916387959866	79.65770171149144	41	0.8536585365853658	59.76251095621687	557	0.7396768402154399	1.1285909712722297	48	0	methylated (>=50%)	Q921L8	Polypeptide N-acetylgalactosaminyltransferase 11 (EC 2.4.1.41) (Polypeptide GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11) (Protein-UDP acetylgalactosaminyltransferase 11) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 11)	cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; Notch receptor processing [GO:0007220]; Notch signaling involved in heart development [GO:0061314]; protein O-linked glycosylation [GO:0006493]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN000667	Chromosome_10A	6027	6	110	36.00464576074332	0.5694498247337938	91.99417758369724	109	0.9908256880733946	95.23234761617381	28	1	90.80866106937694	81	0.9876543209876543	85.15001898974553	51	1	methylated (>=50%)	Q9VJY9	Protein Loquacious	central nervous system development [GO:0007417]; dosage compensation by hyperactivation of X chromosome [GO:0009047]; female germ-line stem cell asymmetric division [GO:0048132]; germ-line stem cell population maintenance [GO:0030718]; miRNA metabolic process [GO:0010586]; pre-miRNA processing [GO:0031054]; regulation of regulatory ncRNA processing [GO:0070920]; RISC complex assembly [GO:0070922]; siRNA processing [GO:0030422]	hit with GO BP
GN000668	Chromosome_10A	9628	12	282	36.98587453261321	0.8577553825011452	0.7844865579550463	272	0	0.5349182763744428	63	0	0.8897243107769424	209	0	3.242320819112628	38	0	unmethylated (<10%)	Q95ZJ1	Polypeptide N-acetylgalactosaminyltransferase 5 (pp-GaNTase 5) (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5)	IRE1-mediated unfolded protein response [GO:0036498]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN000669	Chromosome_10A	1222	2	35	34.69721767594108	0.9552205471803462	0.6150061500615006	35	0	0.3053435114503817	20	0	0.82389289392379	15	0	0.49159120310478654	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000670	Chromosome_10A	3088	2	75	38.27720207253886	0.6695247703928977	0.6354855109303508	75	0	0.642148277875073	67	0	0.5905511811023622	8	0	0.6523157208088715	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000671	Chromosome_10A	56709	12	695	36.42808019891022	0.3732476120238697	69.57336001436671	667	0.7706146926536732	73.78947368421052	76	0.9342105263157895	69.24077610783581	591	0.7495769881556683	49.6124031007752	16	0.5	methylated (>=50%)	Q70E73	Ras-associated and pleckstrin homology domains-containing protein 1 (RAPH1) (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 18 protein) (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 9 protein) (Lamellipodin) (Proline-rich EVH1 ligand 2) (PREL-2) (Protein RMO1)	intracellular signal transduction [GO:0035556]	hit with GO BP
GN000672	Chromosome_10A	339	1	0	40.70796460176991	0	NA	0	NA	NA	NA	NA	NA	NA	NA	63.278688524590166	20	0.65	NA	NA	NA	NA	no Swiss-Prot hit
GN000673	Chromosome_10A	1288	3	19	34.3944099378882	0.5015781922525108	1.810436634717785	19	0	2.5974025974025974	10	0	1.0482180293501049	9	0	0.6403940886699507	35	0	unmethylated (<10%)	Q66I06	Gamma-glutamylaminecyclotransferase B (GGACT B) (EC 4.3.2.8) (AIG2-like domain-containing protein 1-B) (Gamma-glutamylamine cyclotransferase B) (Gamma-glutamylamine cyclotransferase, tandem duplicate 2)	modified amino acid catabolic process [GO:0042219]	hit with GO BP
GN000674	Chromosome_10A	26682	4	467	35.863128700996924	0.5462477250078778	85.00463048712724	425	0.9576470588235294	82.80922431865828	15	1	85.08505817748934	410	0.9560975609756097	80.55827619980411	30	0.9	methylated (>=50%)	P11233	Ras-related protein Ral-A (EC 3.6.5.2)	chemotaxis [GO:0006935]; membrane raft localization [GO:0051665]; neural tube closure [GO:0001843]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of mitochondrial fission [GO:0090141]; protein localization to mitochondrion [GO:0070585]; Ras protein signal transduction [GO:0007265]; receptor internalization [GO:0031623]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of exocytosis [GO:0017157]; regulation of postsynaptic neurotransmitter receptor internalization [GO:0099149]; signal transduction [GO:0007165]	hit with GO BP
GN000675	Chromosome_10A	309	1	7	40.77669902912621	0.5451108870967742	0	7	0	0	7	0	NA	NA	NA	0.517799352750809	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000676	Chromosome_10A	264	1	9	49.621212121212125	0.5611714690599906	0.6872852233676976	9	0	0.6872852233676976	9	0	NA	NA	NA	0.36315615714757343	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000677	Chromosome_10A	931	3	37	42.64232008592911	0.8818996415770609	0.7159353348729792	37	0	0.6490264603095357	33	0	1.5432098765432098	4	0	0.4935370152761457	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000678	Chromosome_10A	1279	3	39	37.294761532447225	0.8783103253979434	0.3857280617164899	39	0	0.34843205574912894	35	0	0.5681818181818182	4	0	1.0851871947911014	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000679	Chromosome_10A	519	1	8	37.37957610789981	0.44358974358974357	3.4482758620689653	8	0	3.4482758620689653	8	0	NA	NA	NA	3.307303628847037	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000680	Chromosome_10A	474	1	24	60.970464135021096	1.6081424936386768	0.7936507936507936	11	0	0.7936507936507936	11	0	NA	NA	NA	0.45454545454545453	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000681	Chromosome_10A	645	1	17	43.25581395348837	0.5638111888111889	22.920892494929006	17	0.23529411764705882	22.920892494929006	17	0.23529411764705882	NA	NA	NA	0.9101251422070534	24	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000682	Chromosome_10A	3663	1	1	30.65793065793066	0.013076258540799498	3.0303030303030303	1	0	3.0303030303030303	1	0	NA	NA	NA	0.5731523378582202	62	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000683	Chromosome_10A	21525	22	291	35.24738675958188	0.43606739683196516	88.03582853486884	281	0.9537366548042705	92.14182044370723	115	0.9739130434782609	86.43492320129346	166	0.9397590361445783	34.129979035639415	44	0.3409090909090909	methylated (>=50%)	O75533	Splicing factor 3B subunit 1 (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155)	chromatin remodeling [GO:0006338]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription by RNA polymerase III [GO:0045945]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal complex assembly [GO:0000245]; spliceosomal snRNP assembly [GO:0000387]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN000684	Chromosome_10A	4315	3	61	36.01390498261877	0.4360282607075116	83.00429184549357	61	0.9180327868852459	82.03592814371258	7	1	83.10661183169883	54	0.9074074074074074	87.51191611058151	22	1	methylated (>=50%)	Q9H8M1	Coenzyme Q-binding protein COQ10 homolog B, mitochondrial	cellular respiration [GO:0045333]	hit with GO BP
GN000685	Chromosome_10A	33278	17	546	36.21611875713685	0.5039376516736209	89.806919234986	541	0.9353049907578558	78.92220773576706	52	0.6730769230769231	90.62714917308007	489	0.9631901840490797	0.4461440407903123	38	0	methylated (>=50%)	O42254	Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2 mRNA-binding protein 1) (IMP-1) (IGF-II mRNA-binding protein 1) (VICKZ family member 1) (Zip-code binding polypeptide) (Zipcode-binding protein 1) (ZBP-1)	CRD-mediated mRNA stabilization [GO:0070934]; negative regulation of translation [GO:0017148]; nervous system development [GO:0007399]; positive regulation of neuron projection development [GO:0010976]	hit with GO BP
GN000686	Chromosome_10A	518	2	29	48.262548262548265	1.0084586466165413	0	4	0	0	4	0	NA	NA	NA	0	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000687	Chromosome_10A	8223	3	268	38.428797275933356	0.8829182692307692	2.743062910400339	249	0	0.42735042735042733	24	0	2.929061784897025	225	0	0.8342813803564657	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000688	Chromosome_10A	237	1	12	55.27426160337553	0.6742532005689901	96.52509652509653	12	1	96.52509652509653	12	1	NA	NA	NA	92.7986906710311	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000689	Chromosome_10A	1710	1	0	42.57309941520468	0	NA	0	NA	NA	NA	NA	NA	NA	NA	66.66666666666667	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000690	Chromosome_10A	243	1	11	51.851851851851855	0.7408536585365854	0	11	0	0	11	0	NA	NA	NA	0.2786809103576405	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000691	Chromosome_10A	213	1	8	53.990610328638496	0.6297117516629712	0.6060606060606061	8	0	0.6060606060606061	8	0	NA	NA	NA	0.3403014098201264	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000692	Chromosome_10A	1520	2	12	50.921052631578945	0.1513341298287535	0.47619047619047616	12	0	0.47619047619047616	12	0	NA	NA	NA	0.9322033898305084	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000693	Chromosome_10A	489	2	1	40.899795501022496	0.059992638940007365	0.9523809523809523	1	0	0.9523809523809523	1	0	NA	NA	NA	0.5115089514066496	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000694	Chromosome_10A	876	1	46	41.78082191780822	1.2034045094818575	0.6032171581769437	46	0	0.6032171581769437	46	0	NA	NA	NA	0.4065040650406504	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000695	Chromosome_10A	5366	4	176	36.45173313455088	0.9898677578365823	0.5617382087970323	175	0	0.5934718100890207	31	0	0.5579297245963912	144	0	3.9805825242718447	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000696	Chromosome_10A	972	1	28	41.04938271604938	0.6840253342716397	1.0575793184488838	28	0	1.0575793184488838	28	0	NA	NA	NA	0.8599230595157276	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000697	Chromosome_10A	510	1	27	59.01960784313726	0.7610257543937217	2.05761316872428	13	0	2.05761316872428	13	0	NA	NA	NA	1.6852327906312483	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000698	Chromosome_10A	29556	13	384	35.08932196508323	0.4221523390084246	85.57013118062564	349	0.9541547277936963	83.86568386568386	50	0.86	85.76515790460125	299	0.9698996655518395	0.47058823529411764	57	0	methylated (>=50%)	P21265	Adenylosuccinate lyase (ADSL) (ASL) (EC 4.3.2.2) (Adenylosuccinase) (ASase)	'de novo' AMP biosynthetic process [GO:0044208]; 'de novo' IMP biosynthetic process [GO:0006189]; 'de novo' XMP biosynthetic process [GO:0097294]; AMP salvage [GO:0044209]; GMP biosynthetic process [GO:0006177]	hit with GO BP
GN000699	Chromosome_10A	411	1	18	46.228710462287104	0.819813829787234	0.20876826722338204	17	0	0.20876826722338204	17	0	NA	NA	NA	0.6097560975609756	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000700	Chromosome_10A	210	1	4	49.523809523809526	0.33136094674556216	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5704971475142624	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000701	Chromosome_10A	165	1	6	53.93939393939394	0.5051020408163265	0.3472222222222222	6	0	0.3472222222222222	6	0	NA	NA	NA	0.492091388400703	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000702	Chromosome_10A	2651	2	107	40.02263296869106	1.0088882407756492	3.9942938659058487	106	0	0.49455984174085066	22	0	5.101721439749609	84	0	0.39284155390659103	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000703	Chromosome_10A	13821	12	401	37.551551986108095	0.8247519592658423	1.1990914373250225	389	0	0.5663430420711975	67	0	1.294124794945015	322	0	0.3611111111111111	59	0	unmethylated (<10%)	A0A1P8AWH8	Endo-1,4-beta-xylanase 1 (AtXyn1) (Xylan endohydrolase 1) (Xylanase 1) (EC 3.2.1.8)	xylan catabolic process [GO:0045493]	hit with GO BP
GN000704	Chromosome_10A	420	1	14	42.142857142857146	0.8519269776876268	0.7012622720897616	14	0	0.7012622720897616	14	0	NA	NA	NA	0.6594932315168345	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000705	Chromosome_10A	3985	2	110	36.73776662484316	0.8194622039766397	0.5044843049327354	110	0	0.5708529214237743	72	0	0.42122999157540014	38	0	0.6644518272425249	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000706	Chromosome_10A	381	1	4	56.16797900262467	0.13956043956043956	1.5625	4	0	1.5625	4	0	NA	NA	NA	0.4935459377372817	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000707	Chromosome_10A	5781	3	219	38.64383324684311	1.015100965759438	0.6201698311229844	219	0	0.6106587712805329	138	0	0.6302934804018121	81	0	0.6732117812061711	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000708	Chromosome_10A	19370	8	263	35.2607124419205	0.4389355005697026	82.29049017393268	263	0.8935361216730038	81.66259168704157	18	0.8888888888888888	82.32089994079337	245	0.8938775510204081	0.959409594095941	28	0	methylated (>=50%)	Q96H20	Vacuolar-sorting protein SNF8 (ELL-associated protein of 30 kDa) (ESCRT-II complex subunit VPS22) (hVps22)	early endosome to late endosome transport [GO:0045022]; endocytic recycling [GO:0032456]; macroautophagy [GO:0016236]; membrane fission [GO:0090148]; multivesicular body assembly [GO:0036258]; multivesicular body sorting pathway [GO:0071985]; positive regulation of exosomal secretion [GO:1903543]; positive regulation of gene expression [GO:0010628]; positive regulation of protein catabolic process [GO:0045732]; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]; regulation of protein catabolic process [GO:0042176]; regulation of protein complex stability [GO:0061635]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN000709	Chromosome_10A	336	1	0	50	0	NA	0	NA	NA	NA	NA	NA	NA	NA	76.69616519174042	47	0.9574468085106383	NA	NA	NA	NA	no Swiss-Prot hit
GN000710	Chromosome_10A	942	1	9	37.367303609341825	0.27401422107304463	19.108826049700085	9	0	19.108826049700085	9	0	NA	NA	NA	38.875878220140514	18	0.16666666666666666	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012826	Chromosome_10A	761	1	5	37.319316688567675	0.18964314194577353	8.96414342629482	5	0	8.96414342629482	5	0	NA	NA	NA	2.972536348949919	54	0	unmethylated (<10%)	Q59RQ0	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	double-strand break repair via break-induced replication [GO:0000727]; negative regulation of telomere maintenance via telomerase [GO:0032211]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]; telomere maintenance via recombination [GO:0000722]; translesion synthesis [GO:0019985]	hit with GO BP
GN000711	Chromosome_10A	219	1	13	47.03196347031963	1.0908045977011493	58.64055299539171	13	0.9230769230769231	58.64055299539171	13	0.9230769230769231	NA	NA	NA	52.93508287292818	53	0.6981132075471698	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000712	Chromosome_10A	8636	5	150	36.05836035201482	0.5346695256118424	81.87265037593986	150	0.8533333333333334	40.39580908032596	18	0.3888888888888889	86.5281588919378	132	0.9166666666666666	35.60823131023704	73	0.3561643835616438	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000713	Chromosome_10A	17197	7	239	34.337384427516426	0.4748519554724947	82.03935374363488	239	0.895397489539749	93.42541436464089	35	1	80.5774278215223	204	0.8774509803921569	54.92822966507177	16	0.625	methylated (>=50%)	Q6P642	DnaJ homolog subfamily B member 6	NA	hit, no GO BP
GN000714	Chromosome_10A	16814	6	449	36.13655287260616	0.8184906481889851	3.2206486980356326	325	0	0.8641975308641975	24	0	3.3349299485091604	301	0	7.754733994589721	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000715	Chromosome_10A	313	2	10	44.08945686900959	0.705431597926527	0	1	0	NA	NA	NA	0	1	0	1.2422360248447204	72	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000716	Chromosome_10A	1245	2	30	36.70682730923695	0.7154350074704057	1.7341040462427746	30	0	0.819672131147541	13	0	2.1301775147928996	17	0	0.6581834137779728	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000717	Chromosome_10A	1573	3	20	42.08518753973299	0.2885391444713479	44.68313641245972	20	0.3	46.098003629764065	13	0.38461538461538464	42.63157894736842	7	0.14285714285714285	36.916342412451364	46	0.2391304347826087	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000718	Chromosome_10A	873	1	21	38.60252004581901	0.6554054054054054	13.540372670807454	21	0	13.540372670807454	21	0	NA	NA	NA	0.5181347150259067	28	0	sparse (10-50%)	A9JTX2	Mitochondrial ribosome-associated GTPase 1 (Mitochondrial GTPase 1)	mitochondrial large ribosomal subunit assembly [GO:1902775]; regulation of mitochondrial translation [GO:0070129]	hit with GO BP
GN000719	Chromosome_10A	477	1	17	40.670859538784065	1.1118881118881119	0.36330608537693004	17	0	0.36330608537693004	17	0	NA	NA	NA	0.5695687550854354	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000720	Chromosome_10A	3036	1	145	44.993412384716734	0.94368986983588	0.8327994875080077	136	0	0.8327994875080077	136	0	NA	NA	NA	0.6932409012131716	70	0	unmethylated (<10%)	Q03601	RING finger protein nhl-1	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]	hit with GO BP
GN000721	Chromosome_10A	1332	1	59	41.891891891891895	1.0297169811320754	65.28481012658227	59	0.9830508474576272	65.28481012658227	59	0.9830508474576272	NA	NA	NA	60.481503229594836	28	0.9642857142857143	methylated (>=50%)	Q5BIM1	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99) (Tripartite motif-containing protein 45)	NA	hit, no GO BP
GN000722	Chromosome_10A	1254	1	0	42.025518341307816	0	NA	0	NA	NA	NA	NA	NA	NA	NA	60.242085661080075	35	0.9428571428571428	NA	NA	NA	NA	no Swiss-Prot hit
GN000723	Chromosome_10A	5616	6	50	36.14672364672364	0.27342411117689214	85.65233104445248	50	0.98	91.2396694214876	16	1	84.08880666049954	34	0.9705882352941176	27.017543859649123	34	0.4117647058823529	methylated (>=50%)	A2A559	GPI-specific phospholipase A2-like PGAP3 (EC 3.1.1.-) (PER1-like domain-containing protein 1) (Post-GPI attachment to proteins factor 3)	GPI anchor biosynthetic process [GO:0006506]; GPI anchor metabolic process [GO:0006505]; GPI anchor remodelling [GO:0120574]; GPI anchored protein biosynthesis [GO:0180046]	hit with GO BP
GN000724	Chromosome_10A	7117	9	98	35.436279331178866	0.44483519567324864	72.75515420003407	98	0.826530612244898	79.6812749003984	56	0.9107142857142857	65.45327266363319	42	0.7142857142857143	38.69747899159664	40	0.425	methylated (>=50%)	Q0VFZ6	Cilia- and flagella- associated protein 210 (Coiled-coil domain-containing protein 173)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN000725	Chromosome_10A	768	1	25	42.578125	0.7206666166203739	89.65811965811966	25	0.96	89.65811965811966	25	0.96	NA	NA	NA	89.25855513307985	31	0.967741935483871	methylated (>=50%)	Q2KI06	Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)	NA	hit, no GO BP
GN000726	Chromosome_10A	9395	6	163	34.91218733368813	0.5702964050939132	88.58123823236238	162	0.9814814814814815	90.83255378858746	27	1	88.27889447236181	135	0.9777777777777777	90.87591240875912	28	0.9642857142857143	methylated (>=50%)	Q5E980	Cytochrome P450 20A1 (EC 1.14.-.-)	NA	hit, no GO BP
GN000727	Chromosome_10A	285	1	6	46.31578947368421	0.39400921658986177	44.398340248962654	6	0.3333333333333333	44.398340248962654	6	0.3333333333333333	NA	NA	NA	58.67507886435331	27	0.8888888888888888	sparse (10-50%)	Q6UW02	Cytochrome P450 20A1 (EC 1.14.-.-)	NA	hit, no GO BP
GN000728	Chromosome_10A	2575	4	16	34.99029126213592	0.20342665284155434	46.794871794871796	16	0.5625	53.257790368271955	9	0.7777777777777778	42.277227722772274	7	0.2857142857142857	48.197343453510435	21	0.5714285714285714	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000729	Chromosome_10A	4062	5	50	32.54554406696209	0.46556407523295396	39.58377574856657	50	0.56	26.306465899025685	18	0.4444444444444444	43.770949720670394	32	0.625	3.5143175901822237	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000730	Chromosome_10A	228	1	5	52.19298245614035	0.3488372093023256	47.2972972972973	5	0.6	47.2972972972973	5	0.6	NA	NA	NA	32.56369426751592	29	0.06896551724137931	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000731	Chromosome_10A	21821	15	265	33.339443655194536	0.4399564529797024	83.70028040294942	262	0.9312977099236641	87.13398402839397	42	0.9761904761904762	83.24511879557751	220	0.9227272727272727	92.78571428571429	23	1	methylated (>=50%)	O19015	Beta-galactosidase (EC 3.2.1.23) (Acid beta-galactosidase) (Lactase)	galactose catabolic process [GO:0019388]; ganglioside catabolic process [GO:0006689]; keratan sulfate proteoglycan catabolic process [GO:0042340]	hit with GO BP
GN000732	Chromosome_10A	1278	2	33	39.045383411580595	0.6777117146071027	0.328515111695138	33	0	0.508130081300813	21	0	0	12	0	0.6369426751592356	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000733	Chromosome_10A	5643	8	172	37.71043771043771	0.8584392014519057	0.4100041000410004	172	0	0.4904364884747425	51	0	0.378931413414172	121	0	1.0033444816053512	32	0	unmethylated (<10%)	Q95ZJ1	Polypeptide N-acetylgalactosaminyltransferase 5 (pp-GaNTase 5) (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5)	IRE1-mediated unfolded protein response [GO:0036498]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN000734	Chromosome_10A	4074	3	59	37.03976435935199	0.4303331077524626	79.84126984126983	59	0.9152542372881356	87.861271676300575	38	0.9736842105263158	70.07042253521126	21	0.8095238095238095	74.84520123839009	15	0.9333333333333333	methylated (>=50%)	Q5U504	Kelch-like protein 40 (Kelch repeat and BTB domain-containing protein 5)	negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein ubiquitination [GO:0031397]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; skeletal muscle fiber development [GO:0048741]; skeletal muscle fiber differentiation [GO:0098528]	hit with GO BP
GN000735	Chromosome_10A	285	1	4	44.21052631578947	0.2878787878787879	68.75	4	1	68.75	4	1	NA	NA	NA	81.83060109289617	27	0.8888888888888888	NA	Q6UW02	Cytochrome P450 20A1 (EC 1.14.-.-)	NA	hit, no GO BP
GN000736	Chromosome_10A	468	1	19	49.14529914529915	0.6955569461827285	0.4319654427645788	19	0	0.4319654427645788	19	0	NA	NA	NA	0.4296763105127471	59	0	unmethylated (<10%)	Q07816	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)	defense response to virus [GO:0051607]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; negative regulation of apoptotic process [GO:0043066]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of execution phase of apoptosis [GO:1900118]; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage [GO:1902230]; negative regulation of protein localization to plasma membrane [GO:1903077]; positive regulation of apoptotic process [GO:0043065]; regulation of cytokinesis [GO:0032465]; regulation of mitochondrial membrane permeability [GO:0046902]; regulation of mitochondrial membrane potential [GO:0051881]; release of cytochrome c from mitochondria [GO:0001836]	hit with GO BP
GN000737	Chromosome_10A	447	1	15	42.95302013422819	0.7678653229500687	0.47468354430379744	15	0	0.47468354430379744	15	0	NA	NA	NA	0.5882352941176471	17	0	unmethylated (<10%)	Q64373	Bcl-2-like protein 1 (Bcl2-L-1) (Apoptosis regulator Bcl-X)	apoptotic process in bone marrow cell [GO:0071839]; cell population proliferation [GO:0008283]; cellular response to alkaloid [GO:0071312]; cellular response to amino acid stimulus [GO:0071230]; cellular response to gamma radiation [GO:0071480]; defense response to virus [GO:0051607]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; fertilization [GO:0009566]; germ cell development [GO:0007281]; hepatocyte apoptotic process [GO:0097284]; in utero embryonic development [GO:0001701]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; male gonad development [GO:0008584]; mitochondrion organization [GO:0007005]; negative regulation of anoikis [GO:2000811]; negative regulation of apoptotic process [GO:0043066]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of execution phase of apoptosis [GO:1900118]; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902042]; negative regulation of intrinsic apoptotic signaling pathway [GO:2001243]; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage [GO:1902230]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of protein localization to plasma membrane [GO:1903077]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; neuron apoptotic process [GO:0051402]; ovarian follicle development [GO:0001541]; positive regulation of apoptotic process [GO:0043065]; positive regulation of ATP biosynthetic process [GO:2001171]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of synaptic vesicle clustering [GO:2000809]; positive regulation of synaptic vesicle endocytosis [GO:1900244]; positive regulation of synaptic vesicle exocytosis [GO:2000302]; regulation of apoptotic process [GO:0042981]; regulation of cytokinesis [GO:0032465]; regulation of growth [GO:0040008]; regulation of long-term synaptic depression [GO:1900452]; regulation of mitochondrial membrane permeability [GO:0046902]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of synaptic vesicle endocytosis [GO:1900242]; release of cytochrome c from mitochondria [GO:0001836]; response to cycloheximide [GO:0046898]; response to cytokine [GO:0034097]; response to ischemia [GO:0002931]; response to radiation [GO:0009314]; response to virus [GO:0009615]; spermatogenesis [GO:0007283]; synaptic vesicle recycling via endosome [GO:0036466]	hit with GO BP
GN000738	Chromosome_10A	1077	1	14	37.79015784586815	0.3742367833209233	71.66666666666667	4	1	71.66666666666667	4	1	NA	NA	NA	84.24479166666667	21	0.9047619047619048	NA	NA	NA	NA	no Swiss-Prot hit
GN000739	Chromosome_10A	381	1	15	40.94488188976378	0.9493355481727574	84.41692466460269	14	1	84.41692466460269	14	1	NA	NA	NA	63.91152502910361	25	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000740	Chromosome_10A	18946	8	475	35.86509025651853	0.7839323037758474	7.423253823938389	469	0.0021321961620469083	9.542230818826564	62	0.016129032258064516	7.159751453197034	407	0	0.3818118708781673	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000741	Chromosome_10A	2182	3	70	41.888175985334556	0.7342986808199684	0.4873726185201595	68	0	0.1342281879194631	31	0	0.6613756613756614	37	0	3.290676416819013	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000742	Chromosome_10A	1406	2	27	37.12660028449502	0.5602420306965762	31.85763888888889	27	0	30.76923076923077	17	0	33.03249097472924	10	0	7.237892496008516	48	0.020833333333333332	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000743	Chromosome_10A	16049	8	168	36.27640351423765	0.31820536288045487	76.83457148034064	167	0.9161676646706587	89.9789029535865	24	0.9166666666666666	75.599603567889	143	0.916083916083916	0.825380448800619	74	0	methylated (>=50%)	P77735	1-deoxyxylulose-5-phosphate synthase YajO (EC 1.1.-.-)	isoprenoid biosynthetic process via mevalonate [GO:1902767]; thiamine metabolic process [GO:0006772]	hit with GO BP
GN000744	Chromosome_10A	24901	6	826	36.789687161158184	0.9815932293336999	4.632632782766831	791	0	0.8781558726673985	36	0	4.765417240910767	755	0	0.31574199368516015	36	0	unmethylated (<10%)	P86856	Nacrein-like protein	one-carbon metabolic process [GO:0006730]	hit with GO BP
GN000745	Chromosome_10A	267	1	1	36.329588014981276	0.11628919860627178	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000746	Chromosome_10A	1039	3	3	41.86717998075072	0.0666025641025641	NA	0	NA	NA	NA	NA	NA	NA	NA	87.2865275142315	18	0.9444444444444444	NA	NA	NA	NA	no Swiss-Prot hit
GN000747	Chromosome_10A	3399	1	146	41.62989114445425	1.0019261053906723	1.431858859626694	146	0	1.431858859626694	146	0	NA	NA	NA	1.4743263853584139	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000748	Chromosome_10A	52075	15	750	36.2342774843975	0.4413961527716373	79.01158202333468	692	0.9407514450867052	83.87660069848661	36	0.9444444444444444	78.82652496402082	656	0.9405487804878049	75.01530924678505	24	0.875	methylated (>=50%)	Q9TUI8	Fatty-acid amide hydrolase 1 (EC 3.5.1.99) (Anandamide amidase) (Anandamide amidohydrolase 1) (Fatty acid ester hydrolase) (EC 3.1.1.-) (Oleamide hydrolase 1)	fatty acid catabolic process [GO:0009062]; monoacylglycerol catabolic process [GO:0052651]	hit with GO BP
GN011511	Chromosome_10A	150	1	8	49.333333333333336	0.9456264775413712	0.43859649122807015	8	0	0.43859649122807015	8	0	NA	NA	NA	0.8107012565869477	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000749	Chromosome_10A	5086	9	81	36.43334644121117	0.48339200225288653	10.362377850162867	81	0	12.426900584795321	25	0	9.565462753950339	56	0	0.9791614361034396	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000750	Chromosome_10A	1557	1	61	39.755940912010274	0.9963179758308157	0.40772532188841204	58	0	0.40772532188841204	58	0	NA	NA	NA	0.6557377049180327	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000751	Chromosome_10A	7648	5	190	37.23849372384937	0.7562425188654697	82.31359920733217	144	0.9513888888888888	90.2046783625731	15	1	80.70384730092455	129	0.9457364341085271	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000752	Chromosome_10A	12015	4	240	37.60299625468165	0.5672490956492214	82.77894451595421	237	0.8481012658227848	43.65162644281217	27	0.4074074074074074	85.47943221320973	210	0.9047619047619048	25	42	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000753	Chromosome_10A	57066	20	1006	35.74457645533242	0.5531714249153598	84.57109353859106	994	0.9647887323943662	82.77591973244147	48	0.9583333333333334	84.63805632660699	946	0.9651162790697675	87.69633507853403	37	0.972972972972973	methylated (>=50%)	Q498E7	SNF2 related chromatin remodeling annealing helicase 1 (EC 3.6.4.-) (EC 5.6.2.-) (HepA-related protein) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1) (Sucrose nonfermenting protein 2-like 1)	DNA repair [GO:0006281]; regulation of transcription by RNA polymerase II [GO:0006357]; replication fork processing [GO:0031297]	hit with GO BP
GN017972	Chromosome_10A	796	2	29	46.608040201005025	0.6734348561759729	0.7486631016042781	29	0	0.6544502617801047	23	0	1.1695906432748537	6	0	0.6993006993006993	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000754	Chromosome_10A	234	1	19	60.256410256410255	0.9606741573033708	0	4	0	0	4	0	NA	NA	NA	0.6317119393556538	72	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000755	Chromosome_10A	420	1	6	55.23809523809524	0.6226834692364714	0.6134969325153374	6	0	0.6134969325153374	6	0	NA	NA	NA	1.034992607195663	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000756	Chromosome_10A	2467	2	75	36.35995135792461	0.9213933569045366	1.1556429800835997	75	0	0.7985803016858918	21	0	1.2925170068027212	54	0	0.37546933667083854	67	0	unmethylated (<10%)	B2RUY7	von Willebrand factor C domain-containing protein 2-like (VWC2-like protein) (Brorin-like)	negative regulation of BMP signaling pathway [GO:0030514]	hit with GO BP
GN000757	Chromosome_10A	318	1	22	52.20125786163522	1.0228070175438597	0.18587360594795538	22	0	0.18587360594795538	22	0	NA	NA	NA	1.0912265386294195	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000758	Chromosome_10A	31603	18	478	36.62943391450179	0.4525087772192649	86.68542316173675	464	0.9547413793103449	93.97018970189701	86	1	85.21075249154246	378	0.9444444444444444	91.91685912240185	30	0.9666666666666667	methylated (>=50%)	P16332	Methylmalonyl-CoA mutase, mitochondrial (MCM) (EC 5.4.99.2) (Methylmalonyl-CoA isomerase)	homocysteine metabolic process [GO:0050667]; positive regulation of GTPase activity [GO:0043547]; post-embryonic development [GO:0009791]; succinyl-CoA biosynthetic process [GO:1901290]	hit with GO BP
GN000759	Chromosome_10A	57781	11	1481	35.760890258043304	0.8017032537622791	1.0837282363345961	1421	0	0.7689491028927133	70	0	1.0955002327937995	1351	0	0.4646840148698885	51	0	unmethylated (<10%)	Q8AXU4	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; angiogenesis [GO:0001525]; cell surface receptor signaling pathway [GO:0007166]	hit with GO BP
GN000760	Chromosome_10A	462	1	9	40.692640692640694	0.4864864864864865	1.9662921348314606	9	0	1.9662921348314606	9	0	NA	NA	NA	1.2269938650306749	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000761	Chromosome_10A	541	2	4	30.31423290203327	0.3578042328042328	0.8333333333333334	4	0	1.2048192771084338	3	0	0	1	0	0.8717595778848359	34	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000762	Chromosome_10A	240	1	11	43.333333333333336	0.9943502824858758	0.6163328197226502	11	0	0.6163328197226502	11	0	NA	NA	NA	2.978723404255319	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000763	Chromosome_10A	3280	4	31	33.323170731707314	0.34326765964917016	22.10953346855984	28	0.10714285714285714	19.784449576597382	21	0.09523809523809523	38.888888888888886	7	0.14285714285714285	34.13978494623656	27	0.2962962962962963	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000764	Chromosome_10A	540	1	7	40.370370370370374	0.328125	29.24187725631769	7	0.14285714285714285	29.24187725631769	7	0.14285714285714285	NA	NA	NA	26.5993265993266	26	0.038461538461538464	sparse (10-50%)	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN000765	Chromosome_10A	1804	3	21	33.980044345898	0.4040529010238908	30.3475935828877	20	0.05	26.10169491525424	10	0	33.11258278145695	10	0.1	0.4835924006908463	68	0	sparse (10-50%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN000766	Chromosome_10A	657	1	32	41.70471841704718	1.1891402714932127	0.8394543546694648	32	0	0.8394543546694648	32	0	NA	NA	NA	0.6879073135409124	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000767	Chromosome_10A	4648	3	83	37.41394148020654	0.5106488871945973	91.93066347878063	83	1	90.11834319526628	34	1	92.850705917693	49	1	92.95420231504781	24	1	methylated (>=50%)	Q6P6S0	Synaptosomal-associated protein 47 (SNAP-47) (Synaptosomal-associated 47 kDa protein)	exocytic insertion of neurotransmitter receptor to postsynaptic membrane [GO:0098967]; exocytosis [GO:0006887]; long-term synaptic potentiation [GO:0060291]; synaptic vesicle fusion to presynaptic active zone membrane [GO:0031629]; synaptic vesicle priming [GO:0016082]	hit with GO BP
GN000768	Chromosome_10A	14160	12	243	36.27824858757062	0.5230445568635081	85.57015797159167	242	0.9214876033057852	74.84276729559748	34	0.7058823529411765	86.6960029336267	208	0.9567307692307693	5.1655629139072845	60	0	methylated (>=50%)	P21775	3-ketoacyl-CoA thiolase A, peroxisomal (EC 2.3.1.16) (Acetyl-CoA C-myristoyltransferase) (EC 2.3.1.155) (Acetyl-CoA acyltransferase A) (EC 2.3.1.9) (Beta-ketothiolase A) (Peroxisomal 3-oxoacyl-CoA thiolase A) (Thiolase A)	bile acid metabolic process [GO:0008206]; fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid biosynthetic process [GO:0006633]; phenylacetate catabolic process [GO:0010124]; response to nutrient [GO:0007584]; response to steroid hormone [GO:0048545]; response to xenobiotic stimulus [GO:0009410]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN000769	Chromosome_10A	19939	9	592	36.83735392948493	0.8751953897436863	1.4569178244261907	591	0	1.2330456226880395	73	0	1.4844906792209271	518	0	0.3624830086089715	50	0	unmethylated (<10%)	Q9ERH8	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (CNT 3) (mCNT3)	nucleoside transmembrane transport [GO:1901642]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN000770	Chromosome_10A	777	1	18	48.262548262548265	0.5186531187421197	0.5547850208044383	18	0	0.5547850208044383	18	0	NA	NA	NA	0.64030131826742	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000771	Chromosome_10A	4057	6	26	35.14912496918905	0.20778898431959655	9.581263307310149	26	0	9.574468085106384	21	0	9.6	5	0	26.356589147286822	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000772	Chromosome_10A	621	1	38	39.130434782608695	2.2534377387318565	NA	0	NA	NA	NA	NA	NA	NA	NA	0	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000773	Chromosome_10A	1797	3	104	38.56427378964941	2.31698487478304	NA	0	NA	NA	NA	NA	NA	NA	NA	2.9702970297029703	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000774	Chromosome_10A	768	2	32	39.453125	1.0716902145473575	0.8695652173913043	32	0	0.9784735812133072	27	0	0.411522633744856	5	0	0.33288948069241014	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000775	Chromosome_10A	45237	34	705	36.17613900126003	0.47962133596413525	88.09441338017714	694	0.9596541786743515	95.03757736516357	157	1	86.09180745935608	537	0.9478584729981379	13.035479632063074	54	0.18518518518518517	methylated (>=50%)	E1C2U2	Telomere-associated protein RIF1 (Rap1-interacting factor 1 homolog)	DNA damage response [GO:0006974]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of isotype switching [GO:0045830]	hit with GO BP
GN000776	Chromosome_10A	5407	3	157	35.50952469021639	0.9211393538236172	0.5439924314096499	156	0	0.43478260869565216	53	0	0.590617617279784	103	0	0.7764477515367195	54	0	unmethylated (<10%)	O42222	Growth/differentiation factor 8 (GDF-8) (Myostatin) (Myostatin-1) (zfMSTN-1) (Myostatin-B)	cardiac muscle myoblast proliferation [GO:0110021]; immune response [GO:0006955]; muscle organ development [GO:0007517]; negative regulation of cardiac muscle myoblast proliferation [GO:0110023]; negative regulation of growth [GO:0045926]; negative regulation of growth rate [GO:0045967]; negative regulation of skeletal muscle tissue development [GO:0048642]; negative regulation of striated muscle tissue development [GO:0045843]; regulation of muscle hyperplasia [GO:0014738]; skeletal muscle tissue development [GO:0007519]; transforming growth factor beta receptor signaling pathway [GO:0007179]; ventricular trabecula myocardium morphogenesis [GO:0003222]	hit with GO BP
GN000777	Chromosome_10A	225	1	9	57.77777777777778	0.48865830115830117	0.5291005291005291	9	0	0.5291005291005291	9	0	NA	NA	NA	0.9203539823008849	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000778	Chromosome_10A	678	1	24	40.85545722713864	0.8488262910798122	0.12330456226880394	24	0	0.12330456226880394	24	0	NA	NA	NA	2.028904947192885	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000779	Chromosome_10A	1011	1	42	39.0702274975272	1.0901668806161746	0.5643340857787811	38	0	0.5643340857787811	38	0	NA	NA	NA	2.6537216828478964	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000780	Chromosome_10A	1223	3	25	47.097301717089124	0.3687822646789212	6.024096385542169	6	0	6.024096385542169	6	0	NA	NA	NA	23.145071982281284	42	0.21428571428571427	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000781	Chromosome_10A	5885	8	79	34.647408666100254	0.4473054779442892	88.570022958347	79	1	92.31843575418995	11	1	88.07134894091416	68	1	28.03921568627451	30	0.36666666666666664	methylated (>=50%)	Q13617	Cullin-2 (CUL-2)	G1/S transition of mitotic cell cycle [GO:0000082]; intrinsic apoptotic signaling pathway [GO:0097193]; negative regulation of beige fat cell differentiation [GO:0160276]; negative regulation of DNA-templated DNA replication [GO:2000104]; negative regulation of transcription by RNA polymerase II [GO:0000122]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN000782	Chromosome_10A	8259	5	102	34.90737377406466	0.4069825190636124	77.32647099735708	102	0.9019607843137255	70.8041958041958	12	0.8333333333333334	77.8902826054103	90	0.9111111111111111	70.56381874783811	54	0.7037037037037037	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000783	Chromosome_10A	453	1	2	40.397350993377486	0.1145385587863464	0	2	0	0	2	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN000784	Chromosome_10A	11295	6	217	38.33554670208056	0.5234002915733923	82.96889089269612	203	0.896551724137931	71.30841121495327	50	0.76	86.67557932263814	153	0.9411764705882353	36.66765315182006	45	0.4666666666666667	methylated (>=50%)	Q6IQX7	Chondroitin-polymerizing factor, non-catalytic subunit (ChPF) (Chondroitin sulfate synthase 2)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]	hit with GO BP
GN000785	Chromosome_10A	2334	1	77	39.67437874892888	0.8386085252327291	0.6987258528565556	77	0	0.6987258528565556	77	0	NA	NA	NA	0.717948717948718	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000786	Chromosome_10A	2136	2	80	39.46629213483146	0.964334085778781	0.5662514156285391	80	0	0.6058566139347021	71	0	0.35650623885918004	9	0	0.9935710111046172	49	0	unmethylated (<10%)	Q9HAY6	Beta,beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) (Beta-carotene dioxygenase 1) (Beta-carotene oxygenase 1)	carotene catabolic process [GO:0016121]; retinal metabolic process [GO:0042574]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; vitamin A biosynthetic process [GO:0035238]	hit with GO BP
GN000787	Chromosome_10A	9444	11	259	35.832274459974585	0.8552589068052986	0.4121878283358927	253	0	0.3588516746411483	81	0	0.43939948736726475	172	0	0.31974420463629094	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000788	Chromosome_10A	25405	19	296	35.54418421570557	0.3701160937855679	78.59873307121013	291	0.9003436426116839	83.52216748768473	84	0.9880952380952381	77.1961829918608	207	0.8647342995169082	16.8	9	0.1111111111111111	methylated (>=50%)	Q58CU2	Band 4.1-like protein 5 (Erythrocyte membrane protein band 4.1-like 5)	actomyosin structure organization [GO:0031032]	hit with GO BP
GN000789	Chromosome_10A	3263	8	35	34.41618142813362	0.3653040335220548	3.6564625850340136	33	0	3.309692671394799	7	0	3.851261620185923	26	0	9.89103101424979	29	0.06896551724137931	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000790	Chromosome_10A	900	2	26	39.888888888888886	0.7297904191616766	0.6295907660020986	26	0	0.5714285714285714	22	0	0.7905138339920948	4	0	0.6168080185042406	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000791	Chromosome_10A	195	1	11	46.666666666666664	1.0392441860465116	1.1627906976744187	10	0	1.1627906976744187	10	0	NA	NA	NA	0.5521048999309869	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000792	Chromosome_10A	324	1	4	40.74074074074074	0.30451127819548873	0	4	0	0	4	0	NA	NA	NA	0.42095416276894293	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000793	Chromosome_10A	474	1	13	43.459915611814345	0.8245684464070654	0.35842293906810035	12	0	0.35842293906810035	12	0	NA	NA	NA	0.5121638924455826	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000794	Chromosome_10A	2359	2	72	56.71894870707927	0.5213899803536346	0.3875968992248062	20	0	0	9	0	0.4914004914004914	11	0	0.8538251366120219	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000795	Chromosome_10A	15765	6	457	36.980653346019665	0.8481170416244056	1.1072392086330936	448	0	0.9333333333333333	63	0	1.1232506751780014	385	0	1.0334849111202977	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000796	Chromosome_10A	13423	6	408	36.75780376964911	0.9002527375794891	1.171034308140271	406	0	0.8701957940536621	32	0	1.1998058117761288	374	0	0.546448087431694	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000797	Chromosome_10A	15619	5	319	34.54766630386068	0.6854016760385963	2.9522771114652353	272	0.003676470588235294	0.45918367346938777	49	0	3.4427381310850147	223	0.004484304932735426	0.9124087591240876	51	0	unmethylated (<10%)	Q92100	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]	hit with GO BP
GN000798	Chromosome_10A	1221	2	29	36.77313677313677	0.7063716884774977	0.6905210295040803	29	0	0.9536784741144414	19	0	0.46565774155995343	10	0	0.2529815684857246	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000799	Chromosome_10A	1176	1	60	39.54081632653061	1.3549427759428527	1.124859392575928	49	0	1.124859392575928	49	0	NA	NA	NA	0.12422360248447205	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000800	Chromosome_10A	1629	1	80	39.96316758747698	1.2740248313618145	0	45	0	0	45	0	NA	NA	NA	0.7438262421898244	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000801	Chromosome_10A	805	2	16	36.52173913043478	0.6015037593984962	0.8849557522123894	7	0	1.4705882352941178	3	0	0	4	0	0.5913660555884093	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000802	Chromosome_10A	873	1	9	37.45704467353952	0.2949102920201186	0.3194888178913738	9	0	0.3194888178913738	9	0	NA	NA	NA	0.43613707165109034	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000803	Chromosome_10A	877	2	22	37.97035347776511	0.6982484076433121	1.0215664018161181	22	0	0.9554140127388535	17	0	1.1857707509881423	5	0	0.4874390701162355	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000804	Chromosome_10A	2125	2	66	39.62352941176471	0.796802563403327	0.5892462558310827	66	0	0.6586483390607102	60	0	0.1721170395869191	6	0	4.6223224351747465	48	0	unmethylated (<10%)	P23953	Carboxylesterase 1C (EC 3.1.1.1) (Liver carboxylesterase N) (Lung surfactant convertase) (PES-N)	response to bacterium [GO:0009617]; short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN000805	Chromosome_10A	4449	3	124	36.90717015059564	0.8194830659536542	0.795362631437045	124	0	0.4647836968180193	51	0	0.995455529106254	73	0	7.358093903293623	49	0	unmethylated (<10%)	Q8BK48	Pyrethroid hydrolase Ces2e (EC 3.1.1.88) (Carboxylic ester hydrolase) (EC 3.1.1.-) (carboxylesterase 2E)	cocaine catabolic process [GO:0050784]; detoxification [GO:0098754]; morphine catabolic process [GO:0071273]; prostaglandin metabolic process [GO:0006693]	hit with GO BP
GN000806	Chromosome_10A	14630	2	435	35.69377990430622	0.9352020573108009	0.5230335948501308	417	0	0.6673511293634496	49	0	0.5073595004460303	368	0	0.7653910149750416	44	0	unmethylated (<10%)	P10959	Carboxylesterase 1C (EC 3.1.1.1) (Carboxyesterase ES-1) (E1) (ES-THET) (Esterase-2) (Liver carboxylesterase 1) (Neutral retinyl ester hydrolase) (NREH) (Retinyl ester hydrolase) (REH)	short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN000807	Chromosome_10A	5507	2	230	39.440711821318324	1.0865594870752255	0.4255867939128192	216	0	0.23798191337458352	54	0	0.4953122235980895	162	0	0.6545454545454545	52	0	unmethylated (<10%)	P10959	Carboxylesterase 1C (EC 3.1.1.1) (Carboxyesterase ES-1) (E1) (ES-THET) (Esterase-2) (Liver carboxylesterase 1) (Neutral retinyl ester hydrolase) (NREH) (Retinyl ester hydrolase) (REH)	short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN001269	Chromosome_10A	862	2	22	35.150812064965194	0.8349771046143009	42.05128205128205	10	0.5	NA	NA	NA	42.05128205128205	10	0.5	91.26760563380282	30	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000808	Chromosome_10A	13849	5	412	38.13271716369413	0.8184342452725992	1.3378852186750323	400	0	0.7471980074719801	55	0	1.3851519681116093	345	0	0.47635250085062947	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000809	Chromosome_10A	1275	1	57	42.509803921568626	0.99120294599018	1.1838440111420614	57	0	1.1838440111420614	57	0	NA	NA	NA	1.8134715025906736	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000810	Chromosome_10A	552	1	19	42.210144927536234	0.7727674624226348	12.066752246469832	19	0.15789473684210525	12.066752246469832	19	0.15789473684210525	NA	NA	NA	0.4204625087596356	45	0	sparse (10-50%)	P91929	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Complex I-42kD) (CI-42kD) (NADH-ubiquinone oxidoreductase 42 kDa subunit)	mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	hit with GO BP
GN000811	Chromosome_10A	2047	3	2	40.84025403028823	0.0240303343350864	46.540880503144656	2	0	NA	NA	NA	46.540880503144656	2	0	51.713632901751716	26	0.5384615384615384	NA	NA	NA	NA	no Swiss-Prot hit
GN002611	Chromosome_10A	3051	6	58	35.49655850540806	0.6037214443625645	0.8178286648947045	57	0	1.0405453893074992	33	0	0.5228136882129277	24	0	0.6177076183939602	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000812	Chromosome_10A	357	1	13	49.57983193277311	0.5994575045207957	0	4	0	0	4	0	NA	NA	NA	11.347517730496454	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020298	Chromosome_10A	357	1	13	50.42016806722689	0.581651836069683	14.285714285714286	3	0	14.285714285714286	3	0	NA	NA	NA	9.63855421686747	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000813	Chromosome_10A	783	1	10	51.59642401021711	0.19281914893617022	NA	0	NA	NA	NA	NA	NA	NA	NA	5.687203791469194	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000814	Chromosome_10A	267	1	13	55.43071161048689	0.6433734939759036	NA	0	NA	NA	NA	NA	NA	NA	NA	0	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000815	Chromosome_10A	270	1	16	52.96296296296296	0.8674698795180723	0	10	0	0	10	0	NA	NA	NA	1.0204081632653061	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000816	Chromosome_10A	492	1	18	55.08130081300813	0.4896063688633348	NA	0	NA	NA	NA	NA	NA	NA	NA	2.272727272727273	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000817	Chromosome_10A	1904	4	55	47.794117647058826	0.5058350722621532	5.936073059360731	13	0	0	2	0	6.666666666666667	11	0	0.7923033389926429	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020007	Chromosome_10A	1669	4	7	31.0964649490713	0.17354426619132501	NA	0	NA	NA	NA	NA	NA	NA	NA	15.051903114186851	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000818	Chromosome_10A	1071	1	25	40.14939309056956	0.5795454545454546	0.4444444444444444	12	0	0.4444444444444444	12	0	NA	NA	NA	7.649723200805234	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000819	Chromosome_10A	447	1	11	39.82102908277405	0.6303846153846154	0.6284916201117319	11	0	0.6284916201117319	11	0	NA	NA	NA	0.6247789697041141	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000820	Chromosome_10A	306	1	2	44.77124183006536	0.13076923076923078	1.6666666666666667	2	0	1.6666666666666667	2	0	NA	NA	NA	23.059866962305986	45	0.08888888888888889	NA	NA	NA	NA	no Swiss-Prot hit
GN000821	Chromosome_10A	1127	3	11	37.267080745341616	0.28962246519016915	26.644370122630992	10	0	27.678054429646785	9	0	0	1	0	23.940298507462686	28	0.17857142857142858	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000822	Chromosome_10A	447	1	12	40.49217002237136	0.6676624346527259	12.153708668453977	12	0	12.153708668453977	12	0	NA	NA	NA	1.246458923512748	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000823	Chromosome_10A	463	2	10	33.909287257019436	0.7516233766233766	65.88940706195869	10	1	74.72353870458136	4	1	59.44700460829493	6	1	84.27622841965471	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000824	Chromosome_10A	1754	2	43	46.35119726339795	0.4607837147639936	4.764370792335577	43	0	6.173725771715722	33	0	1.1152416356877324	10	0	4.189636163175304	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000825	Chromosome_10A	1498	2	14	37.78371161548731	0.2629223343571742	0.922509225092251	14	0	1.0512483574244416	9	0	0.6191950464396285	5	0	1.707970529135968	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000826	Chromosome_10A	270	1	16	52.22222222222222	0.8888888888888888	1	16	0	1	16	0	NA	NA	NA	1.0626762090652786	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000827	Chromosome_10A	918	2	10	36.60130718954248	0.33262074712851913	0.5068790731354091	10	0	0.45871559633027525	8	0	0.6872852233676976	2	0	0.4394821237676684	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000828	Chromosome_10A	1415	2	29	41.76678445229682	0.46994892232987473	14.107883817427386	29	0.034482758620689655	13.9694254085398	24	0.041666666666666664	14.456233421750664	5	0	2.270047169811321	87	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000829	Chromosome_10A	1892	3	20	36.99788583509514	0.30926149923174995	33.02825308396339	9	0.2222222222222222	37.03703703703704	5	0.2	30.136986301369863	4	0.25	15.787178368948975	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000830	Chromosome_10A	1674	1	41	41.09916367980884	0.5935554171855542	90.74267782426779	41	1	90.74267782426779	41	1	NA	NA	NA	47.397260273972606	17	0.29411764705882354	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000831	Chromosome_10A	13439	8	425	37.502790386189446	0.90031131778058	4.31074346195345	421	0.0023752969121140144	0.7390120575651498	92	0	4.854368932038835	329	0.00303951367781155	0.8275862068965517	101	0	unmethylated (<10%)	P91778	Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN000832	Chromosome_10A	3240	4	53	36.111111111111114	0.5026211111403809	71.847739888977	50	0.88	81.57894736842105	31	0.9354838709677419	63.8205499276411	19	0.7894736842105263	70.27027027027027	19	0.7368421052631579	methylated (>=50%)	O54909	Retinol dehydrogenase 16 (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.315) (EC 1.1.1.53) (Cis-retinol androgen dehydrogenase 1)	9-cis-retinoic acid biosynthetic process [GO:0042904]; androgen biosynthetic process [GO:0006702]; positive regulation of retinoic acid biosynthetic process [GO:1900054]; retinoic acid metabolic process [GO:0042573]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; steroid metabolic process [GO:0008202]	hit with GO BP
GN000833	Chromosome_10A	8700	10	198	34.3448275862069	0.7762816353017521	0.6495688206966066	191	0	0.7540603248259861	39	0	0.6245662734212353	152	0	0.5847953216374269	61	0	unmethylated (<10%)	O81884	L-galactose dehydrogenase (At-GalDH) (L-GalDH) (EC 1.1.1.316)	L-ascorbic acid biosynthetic process [GO:0019853]	hit with GO BP
GN000834	Chromosome_10A	20098	21	531	35.003482933625236	0.8625507065988288	0.877568493150685	531	0	0.5868544600938967	129	0	0.9561355809316657	402	0	0.5416384563303994	43	0	unmethylated (<10%)	P13612	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (VLA-4 subunit alpha) (CD antigen CD49d)	axonogenesis involved in innervation [GO:0060385]; B cell differentiation [GO:0030183]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by integrin [GO:0033631]; cell-matrix adhesion [GO:0007160]; cell-matrix adhesion involved in ameboidal cell migration [GO:0003366]; cellular response to amyloid-beta [GO:1904646]; cellular response to cytokine stimulus [GO:0071345]; clathrin-dependent extracellular exosome endocytosis [GO:1990771]; diapedesis [GO:0050904]; endodermal cell differentiation [GO:0035987]; heterotypic cell-cell adhesion [GO:0034113]; immune response in gut-associated lymphoid tissue [GO:0002387]; integrin-mediated signaling pathway [GO:0007229]; leukocyte cell-cell adhesion [GO:0007159]; leukocyte tethering or rolling [GO:0050901]; negative regulation of vasoconstriction [GO:0045906]; neuron projection extension [GO:1990138]; positive regulation of endothelial cell apoptotic process [GO:2000353]; positive regulation of leukocyte tethering or rolling [GO:1903238]; positive regulation of T cell migration [GO:2000406]; positive regulation of vascular endothelial cell proliferation [GO:1905564]; receptor clustering [GO:0043113]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN000835	Chromosome_10A	25955	21	749	35.010595261028705	0.9425337093714259	2.4538479070120793	742	0	0.47976011994003	126	0	2.8550534751211187	616	0	0.49382716049382713	52	0	unmethylated (<10%)	P13612	Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (VLA-4 subunit alpha) (CD antigen CD49d)	axonogenesis involved in innervation [GO:0060385]; B cell differentiation [GO:0030183]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by integrin [GO:0033631]; cell-matrix adhesion [GO:0007160]; cell-matrix adhesion involved in ameboidal cell migration [GO:0003366]; cellular response to amyloid-beta [GO:1904646]; cellular response to cytokine stimulus [GO:0071345]; clathrin-dependent extracellular exosome endocytosis [GO:1990771]; diapedesis [GO:0050904]; endodermal cell differentiation [GO:0035987]; heterotypic cell-cell adhesion [GO:0034113]; immune response in gut-associated lymphoid tissue [GO:0002387]; integrin-mediated signaling pathway [GO:0007229]; leukocyte cell-cell adhesion [GO:0007159]; leukocyte tethering or rolling [GO:0050901]; negative regulation of vasoconstriction [GO:0045906]; neuron projection extension [GO:1990138]; positive regulation of endothelial cell apoptotic process [GO:2000353]; positive regulation of leukocyte tethering or rolling [GO:1903238]; positive regulation of T cell migration [GO:2000406]; positive regulation of vascular endothelial cell proliferation [GO:1905564]; receptor clustering [GO:0043113]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN000836	Chromosome_10A	282	1	28	56.38297872340426	1.3581011351909185	0.907258064516129	28	0	0.907258064516129	28	0	NA	NA	NA	0.7171314741035857	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000837	Chromosome_10A	7487	6	216	35.969012955790035	0.8936539864282399	0.9163365627833723	201	0	0.540749324063345	57	0	1.0396196513470681	144	0	1.1762543650064325	84	0	unmethylated (<10%)	P0DXB9	Cyclic GMP-AMP synthase-like receptor (Cg-cGLR) (Cyclic UMP-AMP synthase cGLR) (EC 2.7.7.-)	NA	hit, no GO BP
GN000838	Chromosome_10A	4861	6	170	38.53116642666118	0.9422669503604325	1.0463618802318093	169	0	0.4435994930291508	42	0	1.2516184721622787	127	0	0.6118546845124283	53	0	unmethylated (<10%)	Q15582	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP)	angiogenesis [GO:0001525]; cell population proliferation [GO:0008283]; chondrocyte differentiation [GO:0002062]; extracellular matrix organization [GO:0030198]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell adhesion [GO:0007162]; visual perception [GO:0007601]	hit with GO BP
GN000839	Chromosome_10A	6693	8	197	39.86254295532646	0.7415607679263907	0.5953205039457289	194	0	0.78125	27	0	0.5552751135790005	167	0	0.8513931888544891	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000840	Chromosome_10A	26294	7	681	35.03460865596714	0.844064385891104	0.7958439261633691	679	0	0.468384074941452	26	0	0.8078608875010743	653	0	0.5789909015715468	35	0	unmethylated (<10%)	Q6AY20	Cation-dependent mannose-6-phosphate receptor (CD Man-6-P receptor) (CD-MPR)	Golgi to lysosome transport [GO:0090160]; lysosomal transport [GO:0007041]; protein targeting to lysosome [GO:0006622]; secretion of lysosomal enzymes [GO:0033299]	hit with GO BP
GN000841	Chromosome_10A	516	1	0	38.565891472868216	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4400977995110024	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000842	Chromosome_10A	28812	11	705	37.70651117589893	0.6890703775210739	1.8788767920109128	684	0	0.6145022531749283	54	0	1.9636383609798966	630	0	0.45286125977768626	60	0	unmethylated (<10%)	O42603	Corticotropin-releasing hormone receptor 2 (CRH-R-2) (CRH-R2) (Corticotropin-releasing factor receptor 2) (CRF-R-2) (CRF-R2) (CRFR-2)	adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cell surface receptor signaling pathway [GO:0007166]; long-term synaptic potentiation [GO:0060291]	hit with GO BP
GN000843	Chromosome_10A	1764	1	59	39.909297052154194	0.8474209176403533	0.7982583454281568	59	0	0.7982583454281568	59	0	NA	NA	NA	0.6464783940115686	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000844	Chromosome_10A	1827	2	77	37.71209633278599	1.1853839801816681	7.228086278109225	77	0	11.901081916537867	35	0	5.254569190600522	42	0	5.723905723905724	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000845	Chromosome_10A	606	1	32	50.33003300330033	0.87100251527129	1.08843537414966	31	0	1.08843537414966	31	0	NA	NA	NA	1.3735215566577643	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000846	Chromosome_10A	30380	20	489	35.34891375905201	0.5176615464385249	90.09257898603968	486	0.9917695473251029	92.46919214970333	71	0.9859154929577465	89.74125425901562	415	0.9927710843373494	93.3184855233853	40	1	methylated (>=50%)	Q5F485	ATP-dependent RNA helicase DDX42 (EC 3.6.4.13) (DEAD box protein 42)	intracellular protein localization [GO:0008104]; regulation of apoptotic process [GO:0042981]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN000847	Chromosome_10A	999	2	41	42.84284284284284	0.9161652537633928	1.225114854517611	33	0	1.6736401673640167	16	0	0.966183574879227	17	0	4.663816556548776	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000848	Chromosome_10A	1215	1	61	48.23045267489712	0.8652936849847641	3.2292218104817363	61	0	3.2292218104817363	61	0	NA	NA	NA	6.09597924773022	49	0	unmethylated (<10%)	Q8R205	Zinc finger CCCH domain-containing protein 10	negative regulation of miRNA processing [GO:1903799]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of RNA splicing [GO:0043484]	hit with GO BP
GN000849	Chromosome_10A	750	1	22	40.666666666666664	0.7128661539790893	0.5434782608695652	10	0	0.5434782608695652	10	0	NA	NA	NA	3.0624263839811543	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000850	Chromosome_10A	1305	1	82	53.63984674329502	1.0084247427343662	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8991399530883503	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000851	Chromosome_10A	1059	5	22	37.67705382436261	0.5864377768828031	0.4032258064516129	21	0	0.4716981132075472	17	0	0	4	0	1.0360360360360361	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000852	Chromosome_10A	1275	5	23	37.01960784313726	0.527883784562212	33.333333333333336	14	0	33.333333333333336	14	0	NA	NA	NA	1.5680684248039916	37	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000853	Chromosome_10A	10449	3	247	31.77337544262609	0.9675758072213635	2.343949044585987	213	0	4.901960784313726	47	0	2.0471993176002274	166	0	1.250710631040364	78	0	unmethylated (<10%)	P56479	Galanin receptor type 1 (GAL1-R) (GALR-1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cortisol secretion [GO:0051464]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN000854	Chromosome_10A	402	1	21	47.2636815920398	0.9702333065164923	0.4132231404958678	21	0	0.4132231404958678	21	0	NA	NA	NA	0.8321775312066574	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000855	Chromosome_10A	13286	6	451	36.70781273521	1.0078542846522205	1.4212574237149294	445	0	0.5256241787122208	42	0	1.4808019918752457	403	0	0.6139677666922486	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000856	Chromosome_10A	9505	4	183	32.82482903734876	0.7328249581327744	1.5576599699088416	183	0	0.498220640569395	46	0	1.7081059227814837	137	0	0.6309148264984227	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000857	Chromosome_10A	3677	3	119	37.82975251563775	0.9047474308872485	0.3317749962298296	119	0	0.5562422744128553	35	0	0.25932575304209055	84	0	0.8018327605956472	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000858	Chromosome_10A	7530	6	193	38.52589641434263	0.7026094338765182	0.462211118051218	186	0	0.8348794063079777	29	0	0.40421538905731197	157	0	0.4600585529067336	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000859	Chromosome_10A	5844	8	143	37.782340862423	0.6889236958385544	1.3333333333333333	143	0	1.9346230820547032	36	0	1.1296882060551288	107	0	0.36396724294813465	39	0	unmethylated (<10%)	Q60997	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Apactin) (CRP-ductin) (Deleted in malignant brain tumors 1 protein) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)	antimicrobial humoral immune response mediated by antimicrobial peptide [GO:0061844]; blastocyst development [GO:0001824]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; induction of bacterial agglutination [GO:0043152]; inner cell mass cell proliferation [GO:0001833]; positive regulation of epithelial cell differentiation [GO:0030858]; receptor-mediated endocytosis [GO:0006898]; response to bacterium [GO:0009617]	hit with GO BP
GN000860	Chromosome_10A	1371	1	60	41.283734500364694	1.0513803680981595	0.7798440311937612	60	0	0.7798440311937612	60	0	NA	NA	NA	0.7173133355070102	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000861	Chromosome_10A	4642	3	211	45.9931064196467	0.8608762909250715	1.3675623800383878	118	0	0.8708272859216255	24	0	1.465938488071285	94	0	1.8095987411487018	28	0	unmethylated (<10%)	P31597	Excitatory amino acid transporter 3 (Excitatory amino-acid carrier 1) (Sodium-dependent glutamate/aspartate transporter 3) (Solute carrier family 1 member 1)	chloride transmembrane transport [GO:1902476]; D-aspartate import across plasma membrane [GO:0070779]; L-aspartate import across plasma membrane [GO:0140009]; L-cysteine transport [GO:0042883]; L-glutamate import across plasma membrane [GO:0098712]; L-glutamate transmembrane transport [GO:0015813]	hit with GO BP
GN000862	Chromosome_10A	464	2	26	38.14655172413793	1.5769934640522876	0.8849557522123894	26	0	0.9345794392523364	25	0	0	1	0	0.9195402298850575	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000863	Chromosome_10A	20779	8	261	33.548293950623226	0.4466990772825491	1.3072568193515182	225	0	1.0416666666666667	19	0	1.3269932544509566	206	0	0.4215456674473068	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000864	Chromosome_10A	387	1	5	35.1421188630491	0.496790757381258	0.29069767441860467	5	0	0.29069767441860467	5	0	NA	NA	NA	1.6713091922005572	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000865	Chromosome_10A	4820	3	91	35.06224066390042	0.6168112061582682	2.4616626311541565	91	0	5.577689243027889	19	0	1.4050256687381788	72	0	0.6015733456732995	37	0	unmethylated (<10%)	Q9Z0J1	Reversion-inducing cysteine-rich protein with Kazal motifs (mRECK)	blood vessel maturation [GO:0001955]; canonical Wnt signaling pathway [GO:0060070]; embryo implantation [GO:0007566]; embryonic forelimb morphogenesis [GO:0035115]; extracellular matrix organization [GO:0030198]; negative regulation of cell migration [GO:0030336]; negative regulation of extracellular matrix disassembly [GO:0010716]; positive regulation of amyloid precursor protein biosynthetic process [GO:0042986]; positive regulation of amyloid-beta formation [GO:1902004]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; regulation of angiogenesis [GO:0045765]; regulation of canonical Wnt signaling pathway [GO:0060828]; regulation of establishment of blood-brain barrier [GO:0090210]; regulation of extracellular matrix organization [GO:1903053]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN000866	Chromosome_10A	1730	2	31	42.08092485549133	0.40832952641997866	0.7142857142857143	31	0	0.7142857142857143	31	0	NA	NA	NA	1.7618469015795868	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000867	Chromosome_10A	420	1	12	51.42857142857143	0.4609053497942387	64.10998552821997	12	0.9166666666666666	64.10998552821997	12	0.9166666666666666	NA	NA	NA	71.00681302043907	33	0.7878787878787878	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000868	Chromosome_10A	13203	6	255	34.15890327955768	0.6712244131410471	76.48876187533791	252	0.9285714285714286	69.38534278959811	67	0.9402985074626866	78.2207704870785	185	0.9243243243243243	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000869	Chromosome_10A	17737	15	459	37.616282347634886	0.7343174643233424	1.3218911571877832	455	0	0.8086253369272237	67	0	1.4183499018552523	388	0	1.2481278082875686	47	0	unmethylated (<10%)	Q91085	Vasoactive intestinal polypeptide receptor (VIP receptor) (VIP-R)	adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cell surface receptor signaling pathway [GO:0007166]	hit with GO BP
GN000870	Chromosome_10A	6528	6	82	35.018382352941174	0.41028754067073664	47.29281767955801	29	0.5172413793103449	60.68376068376068	9	0.7777777777777778	45.30456852791878	20	0.4	77.96383121232418	37	0.9459459459459459	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000871	Chromosome_10A	531	1	5	34.27495291902071	0.33864795918367346	NA	0	NA	NA	NA	NA	NA	NA	NA	67.3963133640553	22	0.8636363636363636	NA	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN000872	Chromosome_10A	24008	7	286	30.235754748417193	0.5216367615571199	83.55372498012862	246	0.9552845528455285	80.64935064935065	23	0.9130434782608695	83.72484505317928	223	0.9596412556053812	70.08676789587852	87	0.8160919540229885	methylated (>=50%)	Q08EN7	Zinc finger CW-type PWWP domain protein 2 homolog	NA	hit, no GO BP
GN000873	Chromosome_10A	51966	21	832	36.11977061925105	0.49755323150755076	69.40781427205408	742	0.7439353099730458	94.92560091568103	136	0.9852941176470589	66.04072796838422	606	0.6897689768976898	90.9090909090909	13	1	methylated (>=50%)	Q99NH2	Partitioning defective 3 homolog (PAR-3) (PARD-3) (Atypical PKC isotype-specific-interacting protein) (ASIP) (Ephrin-interacting protein) (PHIP)	apical constriction [GO:0003383]; bicellular tight junction assembly [GO:0070830]; cell adhesion [GO:0007155]; cell-cell adhesion [GO:0098609]; centrosome localization [GO:0051642]; establishment of cell polarity [GO:0030010]; establishment of epithelial cell polarity [GO:0090162]; establishment or maintenance of cell polarity [GO:0007163]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; intracellular protein localization [GO:0008104]; microtubule cytoskeleton organization [GO:0000226]; myelination in peripheral nervous system [GO:0022011]; negative regulation of peptidyl-threonine phosphorylation [GO:0010801]; positive regulation of myelination [GO:0031643]; positive regulation of receptor internalization [GO:0002092]; protein targeting to membrane [GO:0006612]; regulation of actin filament-based process [GO:0032970]; regulation of cellular localization [GO:0060341]; wound healing, spreading of cells [GO:0044319]	hit with GO BP
GN000874	Chromosome_10A	3900	9	37	34.17948717948718	0.3254750175932442	3.35195530726257	8	0	0	5	0	5.660377358490566	3	0	0.5685407454200885	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000875	Chromosome_10A	3133	2	56	37.120970315991066	0.519276644863409	9.487087517934002	50	0	8.542713567839195	39	0	11.842105263157896	11	0	9.251101321585903	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000876	Chromosome_10A	52557	21	759	35.6432064235021	0.455663915212905	78.99266748835363	719	0.9165507649513213	79.33491686460808	93	0.989247311827957	78.96324863883848	626	0.9057507987220448	81.27490039840637	46	0.8478260869565217	methylated (>=50%)	Q91VD9	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 7.1.1.2) (Complex I-75kD) (CI-75kD)	aerobic respiration [GO:0009060]; cellular respiration [GO:0045333]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]; proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	hit with GO BP
GN000877	Chromosome_10A	327	1	8	47.706422018348626	0.4345514950166113	96.67673716012085	8	1	96.67673716012085	8	1	NA	NA	NA	92.95039164490862	49	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000878	Chromosome_10A	531	1	18	48.39924670433145	0.6134000770119369	3.6036036036036037	9	0	3.6036036036036037	9	0	NA	NA	NA	1.9386676066267183	89	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000879	Chromosome_10A	198	1	1	43.43434343434343	0.11785714285714285	0	1	0	0	1	0	NA	NA	NA	6.7280453257790365	93	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000880	Chromosome_10A	216	1	14	52.77777777777778	0.9310344827586207	0.9162303664921466	14	0	0.9162303664921466	14	0	NA	NA	NA	0.34390523500191056	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000881	Chromosome_10A	414	1	3	55.072463768115945	0.17202216066481996	NA	0	NA	NA	NA	NA	NA	NA	NA	61.70921198668147	27	0.8518518518518519	NA	NA	NA	NA	no Swiss-Prot hit
GN000882	Chromosome_10A	556	2	13	40.46762589928058	0.599535500995355	44.87179487179487	4	0.25	44.87179487179487	4	0.25	NA	NA	NA	1.2280701754385965	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000883	Chromosome_10A	561	1	5	40.64171122994652	0.2186793482497856	1.6260162601626016	5	0	1.6260162601626016	5	0	NA	NA	NA	0.6796941376380629	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000884	Chromosome_10A	849	1	23	43.81625441696113	0.5739858906525573	10.9375	22	0	10.9375	22	0	NA	NA	NA	3.3008252063015755	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000885	Chromosome_10A	3267	2	79	33.608815426997246	0.8564133193967448	0.9803921568627451	79	0	0.6596306068601583	13	0	1.0248901903367496	66	0	0.5964214711729622	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000886	Chromosome_10A	909	2	17	52.475247524752476	0.2738922367954626	0.8333333333333334	13	0	0.8333333333333334	13	0	NA	NA	NA	0.5869289340101523	97	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000887	Chromosome_10A	2831	3	26	38.1490639350053	0.2591477690815439	44.11764705882353	6	0.5	44.11764705882353	6	0.5	NA	NA	NA	37.4496644295302	11	0.09090909090909091	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000888	Chromosome_10A	551	2	12	45.190562613430124	0.45016339869281047	17.86764705882353	12	0	17.515923566878982	11	0	22.115384615384617	1	0	18.112930823759473	22	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000889	Chromosome_10A	318	1	5	40.25157232704402	0.4301948051948052	31.51750972762646	5	0	31.51750972762646	5	0	NA	NA	NA	22.296364473078693	32	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000890	Chromosome_10A	348	1	12	51.14942528735632	0.5615167406212183	26.770538243626063	12	0	26.770538243626063	12	0	NA	NA	NA	42.08100098781692	37	0.3783783783783784	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000891	Chromosome_10A	780	1	19	38.84615384615385	0.7781161398718891	46.23450905624404	19	0.2631578947368421	46.23450905624404	19	0.2631578947368421	NA	NA	NA	38.20569674228211	38	0.07894736842105263	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000892	Chromosome_10A	246	1	12	50	0.780539397144368	15.683962264150944	12	0	15.683962264150944	12	0	NA	NA	NA	10.771935432315805	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000893	Chromosome_10A	204	1	9	50	0.7061538461538461	7.471264367816092	9	0	7.471264367816092	9	0	NA	NA	NA	13.72719374456994	35	0.02857142857142857	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000894	Chromosome_10A	204	1	5	50.490196078431374	0.43478260869565216	16.19047619047619	5	0	16.19047619047619	5	0	NA	NA	NA	16.70250896057348	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000895	Chromosome_10A	4000	6	61	37.05	0.44897839015486074	12.261217236783652	53	0	11.054913294797688	34	0	14.186851211072664	19	0	15.343727852586818	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000896	Chromosome_10A	4613	5	99	37.39432039887275	0.6149457480414625	32.09453364604005	96	0.20833333333333334	59.22174840085288	30	0.5	18.21652577038451	66	0.07575757575757576	10.794044665012407	21	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000897	Chromosome_10A	756	1	36	46.560846560846564	0.8938811705586758	NA	0	NA	NA	NA	NA	NA	NA	NA	83.73613875462041	29	0.9655172413793104	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN000898	Chromosome_10A	258	1	6	50.775193798449614	0.3703349282296651	9.45945945945946	6	0	9.45945945945946	6	0	NA	NA	NA	3.0792786662129976	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000899	Chromosome_10A	345	1	8	50.72463768115942	0.368	6.691449814126394	8	0	6.691449814126394	8	0	NA	NA	NA	2.7276930189551547	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000900	Chromosome_10A	519	1	8	39.884393063583815	0.38963963963963966	0	4	0	0	4	0	NA	NA	NA	0.7662835249042146	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000901	Chromosome_10A	264	1	9	48.10606060606061	0.6130030959752322	1.36986301369863	6	0	1.36986301369863	6	0	NA	NA	NA	2.962962962962963	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000902	Chromosome_10A	2829	5	28	32.37893248497702	0.37925157039987745	39.86901350798199	22	0.45454545454545453	48.63481228668942	12	0.6666666666666666	37.102854065697365	10	0.2	49.83783783783784	33	0.6363636363636364	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000903	Chromosome_10A	2385	3	27	36.43605870020964	0.3414731148584155	12.449945394976337	27	0	12.669003505257887	19	0	11.866666666666667	8	0	1.3191030099532317	69	0	sparse (10-50%)	P40724	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN000904	Chromosome_10A	2580	8	28	35.310077519379846	0.35095219588029536	84.61538461538461	1	1	NA	NA	NA	84.61538461538461	1	1	13.095238095238095	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000905	Chromosome_10A	654	1	36	42.813455657492355	1.2073846153846153	0.3663003663003663	36	0	0.3663003663003663	36	0	NA	NA	NA	0.6885828520657485	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000906	Chromosome_10A	450	1	16	42.44444444444444	0.7896468523799078	0.5952380952380952	16	0	0.5952380952380952	16	0	NA	NA	NA	0.4032258064516129	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000907	Chromosome_10A	10851	4	367	40.420237766104506	0.8287377634601938	1.10140771637122	330	0	2.5100401606425704	26	0	1.0036241984945637	304	0	0.5751533742331288	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000908	Chromosome_10A	7228	6	125	37.31322634200332	0.5175212593265522	0.4478865354110292	122	0	0.43912175648702595	59	0	0.45558086560364464	63	0	0.454733360892931	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000909	Chromosome_10A	17315	14	296	38.00173260179036	0.48142328548069063	0.5894656778855296	295	0	0.6719252118025124	71	0	0.5666180994010037	224	0	0.6590357266736039	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000910	Chromosome_10A	53371	12	1499	36.7559161342302	0.8323778945225351	0.6121083906293749	1241	0	0.4112718964204113	94	0	0.6229150786430286	1147	0	0.32247662044501774	49	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN000911	Chromosome_10A	300	1	2	40.333333333333336	0.16393442622950818	0.7246376811594203	2	0	0.7246376811594203	2	0	NA	NA	NA	0.8896077638495754	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000912	Chromosome_10A	1435	2	59	38.397212543554005	1.1223123624698428	0.6280388978930308	59	0	0.574345883854499	38	0	0.7214206437291898	21	0	0.5473584007615421	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000913	Chromosome_10A	1111	2	32	39.15391539153915	0.7582647272106813	1.1723838471558836	32	0	1.2971698113207548	26	0	0.8237232289950577	6	0	0.9070294784580499	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000914	Chromosome_10A	3345	5	35	33.303437967115094	0.37860780984719866	0.55817947617003	35	0	0.6681514476614699	5	0	0.5319148936170213	30	0	0.21986075485525833	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000915	Chromosome_10A	309	1	9	45.30744336569579	0.6031229668184775	1.03397341211226	9	0	1.03397341211226	9	0	NA	NA	NA	1.1260808365171928	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000916	Chromosome_10A	939	1	25	41.0010649627263	0.6400643472570618	0.4051863857374392	25	0	0.4051863857374392	25	0	NA	NA	NA	0.7390983000739099	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000917	Chromosome_10A	13668	6	344	36.64032777290021	0.7498928221460068	1.503964998632759	338	0	0.9471432936144211	54	0	1.6015855160962023	284	0	0.5694261936049059	56	0	unmethylated (<10%)	P83939	Secernin-1 (p50)	exocytosis [GO:0006887]; proteolysis [GO:0006508]	hit with GO BP
GN000918	Chromosome_10A	11178	9	260	36.59867597065665	0.6971061130268089	87.35000895468927	255	0.9098039215686274	90.40223018717643	54	0.9074074074074074	86.81179775280899	201	0.9104477611940298	0.5055147058823529	44	0	methylated (>=50%)	Q7ZVY5	Citrate synthase, mitochondrial (EC 2.3.3.1) (Citrate (Si)-synthase)	carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; response to activity [GO:0014823]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN019928	Chromosome_10A	10688	6	217	39.46482035928144	0.523846780707191	91.77178483398579	217	0.9953917050691244	92.45139153640869	80	1	91.61221018709158	137	0.9927007299270073	80.07498660953401	31	1	methylated (>=50%)	Q9PSZ3	Disintegrin and metalloproteinase domain-containing protein 11 (ADAM 11) (MDC11.1) (Metalloprotease-disintegrin MDC11a) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein) (MDC)	epithelial to mesenchymal transition [GO:0001837]; neural crest cell migration [GO:0001755]; neural tube closure [GO:0001843]; proteolysis [GO:0006508]	hit with GO BP
GN000919	Chromosome_10A	543	1	18	49.171270718232044	0.5506478873239437	0.45454545454545453	16	0	0.45454545454545453	16	0	NA	NA	NA	0.6607929515418502	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000920	Chromosome_10A	661	2	19	48.71406959152799	0.48875311332503113	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7477906186267845	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000921	Chromosome_10A	330	1	12	51.21212121212121	0.5555555555555556	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5387931034482759	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000922	Chromosome_10A	2059	2	60	38.31957260806217	0.7938160228236564	0.63913470993117	60	0	0.8183306055646481	15	0	0.5621925509486999	45	0	0.4971002485501243	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003866	Chromosome_1A	885	1	24	37.96610169491525	0.7585985213757634	0.7838745800671892	24	0	0.7838745800671892	24	0	NA	NA	NA	1.8453427065026362	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003865	Chromosome_1A	471	1	12	55.20169851380042	0.3777064955894146	NA	0	NA	NA	NA	NA	NA	NA	NA	0	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001804	Chromosome_1A	1112	2	24	42.71582733812949	0.49285318559556784	0	16	0	0	15	0	0	1	0	0.7827788649706457	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003864	Chromosome_1A	1226	2	32	45.26916802610114	0.518434336760314	1.0854816824966078	32	0	1.1126564673157162	31	0	0	1	0	0.5832604257801108	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003154	Chromosome_1A	2180	4	60	47.56880733944954	0.4866940525093767	0	8	0	0	8	0	NA	NA	NA	0.4750593824228028	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003858	Chromosome_1A	1071	1	67	54.248366013071895	0.8698029043128318	14.848484848484848	22	0	14.848484848484848	22	0	NA	NA	NA	9.625212947189096	75	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003859	Chromosome_1A	1396	2	78	51.00286532951289	0.867557425245596	17.404129793510325	22	0	17.404129793510325	22	0	NA	NA	NA	6.257668711656442	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003860	Chromosome_1A	975	1	27	37.743589743589745	0.787819841388598	0.26490066225165565	27	0	0.26490066225165565	27	0	NA	NA	NA	0.5685856432125089	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003857	Chromosome_1A	1071	2	23	36.78804855275443	0.6349856932951822	0.30272452068617556	23	0	0.14903129657228018	15	0	0.625	8	0	0.6918238993710691	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003856	Chromosome_1A	2629	4	42	38.41764929631039	0.4377914168807689	92.26322810137839	42	0.9761904761904762	95.21158129175947	18	1	90.30347890451517	24	0.9583333333333334	77.72455089820359	7	0.8571428571428571	methylated (>=50%)	Q99KX1	Myeloid leukemia factor 2 (Myelodysplasia-myeloid leukemia factor 2)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN003855	Chromosome_1A	1761	2	27	38.444065871663824	0.41882035833201203	81.504221028396	27	0.8518518518518519	84.86293206197854	19	0.8947368421052632	75.43103448275862	8	0.75	71.16104868913858	9	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003853	Chromosome_1A	324	1	31	53.08641975308642	1.3646739130434782	27.880330999363462	31	0	27.880330999363462	31	0	NA	NA	NA	29.78655622809812	12	0.16666666666666666	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003848	Chromosome_1A	3219	3	117	45.44889717303511	0.7110253166946705	NA	0	NA	NA	NA	NA	NA	NA	NA	30.980834272829764	48	0.22916666666666666	NA	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003851	Chromosome_1A	1233	1	21	41.119221411192214	0.4040730337078652	72.22884386174017	14	0.9285714285714286	72.22884386174017	14	0.9285714285714286	NA	NA	NA	72.51332149200711	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003852	Chromosome_1A	4918	3	177	43.18828792191948	0.7751820215433717	95.67901234567901	13	1	95.67901234567901	13	1	NA	NA	NA	41.83574879227053	28	0.6071428571428571	methylated (>=50%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003850	Chromosome_1A	546	1	25	45.23809523809524	0.9042130365659777	96.82539682539682	2	1	96.82539682539682	2	1	NA	NA	NA	59.5729537366548	26	0.6153846153846154	NA	NA	NA	NA	no Swiss-Prot hit
GN003847	Chromosome_1A	3219	3	116	45.44889717303511	0.7051452009472337	82.53588516746412	11	1	87.79661016949153	9	1	69.91869918699187	2	1	41.89765458422175	16	0.375	methylated (>=50%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003843	Chromosome_1A	7426	5	80	35.45650417452195	0.34986713906111605	75.3071253071253	79	0.7974683544303798	50.85592011412268	26	0.5769230769230769	85.15221137277426	53	0.9056603773584906	19.239968110550095	66	0	methylated (>=50%)	Q8BIY1	G patch domain-containing protein 3	negative regulation of RIG-I signaling pathway [GO:0039536]; negative regulation of type I interferon production [GO:0032480]; positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN003844	Chromosome_1A	28271	15	289	34.123306568568495	0.35247262619817676	77.59853903515446	288	0.8819444444444444	71.59015302727877	30	0.8	78.09445359692477	258	0.8914728682170543	52.323232323232325	13	0.5384615384615384	methylated (>=50%)	Q8N5S9	Calcium/calmodulin-dependent protein kinase kinase 1 (CaM-KK 1) (CaM-kinase kinase 1) (CaMKK 1) (EC 2.7.11.17) (CaM-kinase IV kinase) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-KK alpha) (CaM-kinase kinase alpha) (CaMKK alpha)	intracellular signal transduction [GO:0035556]	hit with GO BP
GN003841	Chromosome_1A	802	2	2	43.14214463840399	0.055880713489409144	86.15384615384616	2	1	86.15384615384616	2	1	NA	NA	NA	86.24145785876993	31	0.967741935483871	NA	NA	NA	NA	no Swiss-Prot hit
GN003838	Chromosome_1A	2337	2	38	33.16217372700043	0.5914721867007673	30.989370400654128	38	0.3684210526315789	16.30648330058939	9	0.2222222222222222	34.84770263293753	29	0.41379310344827586	2.2618529795563287	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003837	Chromosome_1A	650	2	12	40.15384615384615	0.4695966285370259	0.9950248756218906	12	0	1.1267605633802817	9	0	0.8064516129032258	3	0	1.7638266068759343	54	0	unmethylated (<10%)	Q9UDX5	Mitochondrial fission process protein 1 (Mitochondrial 18 kDa protein) (MTP18)	mitochondrial fission [GO:0000266]; negative regulation of mitochondrial fusion [GO:0010637]	hit with GO BP
GN003836	Chromosome_1A	823	2	25	39.3681652490887	0.7898878992628993	0.8898776418242491	25	0	0.8898776418242491	25	0	NA	NA	NA	0.7755695588948134	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003835	Chromosome_1A	984	2	39	43.1910569105691	0.8570662855100947	0.9486166007905138	39	0	0.975609756097561	36	0	0.8333333333333334	3	0	0.4529616724738676	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003834	Chromosome_1A	847	3	18	43.68358913813459	0.4507317073170732	0.7352941176470589	18	0	0.7974481658692185	15	0	0.5291005291005291	3	0	1.163563829787234	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003833	Chromosome_1A	410	1	13	47.31707317073171	0.5679880647911338	1.1904761904761905	10	0	1.1904761904761905	10	0	NA	NA	NA	0.6542056074766355	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003832	Chromosome_1A	916	2	20	43.44978165938865	0.46318770226537215	0.6944444444444444	13	0	0.7751937984496124	7	0	0.6711409395973155	6	0	1.1627906976744187	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003831	Chromosome_1A	1096	3	32	37.31751824817518	0.8423075075652049	0.540765391014975	32	0	0.4456824512534819	25	0	0.8210180623973727	7	0	0.29708853238265004	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003829	Chromosome_1A	3096	6	75	36.82170542635659	0.7253099434932951	1.4288298064749503	75	0	1.4970059880239521	69	0	0.7707129094412332	6	0	1.2626262626262625	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003828	Chromosome_1A	8669	10	238	35.89802745414696	0.8521766785619879	0.7825507825507826	238	0	0.9332376166547021	63	0	0.7370474745285064	175	0	7.365335287651154	48	0	unmethylated (<10%)	Q6PAY6	Hydroxyproline dehydrogenase (HYPDH) (EC 1.5.5.3) (Probable proline dehydrogenase 2) (EC 1.5.5.2) (Probable proline oxidase 2)	L-proline catabolic process [GO:0006562]	hit with GO BP
GN003827	Chromosome_1A	2782	2	47	35.729690869877786	0.52935127607203	75.82100324792493	47	0.7872340425531915	70.66492829204694	16	0.875	77.7944111776447	31	0.7419354838709677	37.40053050397878	32	0.5	methylated (>=50%)	Q8BJK1	BTB/POZ domain-containing protein KCTD7	intracellular glutamate homeostasis [GO:0090461]; intracellular potassium ion homeostasis [GO:0030007]; membrane hyperpolarization [GO:0060081]; positive regulation of transporter activity [GO:0032411]; protein homooligomerization [GO:0051260]	hit with GO BP
GN003826	Chromosome_1A	7232	6	133	35.75774336283186	0.5756142400275762	85.09356850935686	121	0.9917355371900827	88.52643419572553	15	1	84.28191489361703	106	0.9905660377358491	81.01933216168717	43	0.813953488372093	methylated (>=50%)	Q4V7D6	NIF3-like protein 1	negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron differentiation [GO:0030182]; positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN004432	Chromosome_1A	2726	3	24	31.95157740278797	0.3451178984016458	48.57651245551602	20	0.35	39.93993993993994	13	0.23076923076923078	61.1353711790393	7	0.5714285714285714	25.179425837320576	48	0.125	sparse (10-50%)	Q6P3Z3	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]; nitrate metabolic process [GO:0042126]	hit with GO BP
GN003825	Chromosome_1A	14001	5	216	33.16905935290336	0.5615538034661215	75.35714285714286	210	0.8904761904761904	42.67782426778243	9	0.3333333333333333	76.31417718416861	201	0.9154228855721394	40.34151547491996	20	0.45	methylated (>=50%)	Q5I0P2	Glycine cleavage system H protein, mitochondrial (Lipoic acid-containing protein)	glycine decarboxylation via glycine cleavage system [GO:0019464]	hit with GO BP
GN003770	Chromosome_1A	7099	5	46	35.483870967741936	0.20769218048995802	78.80932556203165	36	0.9444444444444444	72.41379310344827	5	1	79.78876620259241	31	0.9354838709677419	44.64609800362977	48	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003769	Chromosome_1A	456	1	0	41.8859649122807	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.5625	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003768	Chromosome_1A	447	1	0	42.72930648769575	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4492753623188406	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003773	Chromosome_1A	7428	14	219	34.42380183091007	0.9952901011361759	0.5481874447391689	219	0	0.6083958629081322	110	0	0.5016460260228875	109	0	0.5640612409347301	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003774	Chromosome_1A	33831	17	387	33.56093523691289	0.4112941074910168	73.9746158984636	312	0.8044871794871795	80.30867482703566	33	0.8484848484848485	73.06546482316095	279	0.7992831541218638	84.56289978678038	34	0.9117647058823529	methylated (>=50%)	Q99KW9	T-cell immunomodulatory protein (Protein TIP) (Integrin-alpha FG-GAP repeat-containing protein 1) (Linkin)	NA	hit, no GO BP
GN003775	Chromosome_1A	11636	10	144	34.659676864902025	0.4133784313870612	88.81436607529209	142	0.9507042253521126	89.5798319327731	23	0.9565217391304348	88.7012664514527	119	0.9495798319327731	92.13863060016907	27	0.9629629629629629	methylated (>=50%)	Q3ZBX6	Large ribosomal subunit protein uL3m (39S ribosomal protein L3, mitochondrial) (L3mt) (MRP-L3)	translation [GO:0006412]	hit with GO BP
GN003776	Chromosome_1A	6571	14	60	34.98706437376351	0.30062907468832206	88.54428611343951	60	0.9333333333333333	90.75255102040816	29	0.9310344827586207	86.8224763799105	31	0.9354838709677419	62.45674740484429	10	0.6	methylated (>=50%)	Q2HJG5	Vacuolar protein sorting-associated protein 35 (Vesicle protein sorting 35)	endocytic recycling [GO:0032456]; endosome to plasma membrane protein transport [GO:0099638]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; mitochondrion to lysosome vesicle-mediated transport [GO:0099074]; negative regulation of inflammatory response [GO:0050728]; negative regulation of late endosome to lysosome transport [GO:1902823]; neurotransmitter receptor transport, endosome to plasma membrane [GO:0099639]; positive regulation of dopamine receptor signaling pathway [GO:0060161]; positive regulation of gene expression [GO:0010628]; positive regulation of mitochondrial fission [GO:0090141]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein localization to cell periphery [GO:1904377]; protein localization to endosome [GO:0036010]; regulation of dendritic spine maintenance [GO:1902950]; regulation of protein stability [GO:0031647]; regulation of terminal button organization [GO:2000331]; retrograde transport, endosome to Golgi [GO:0042147]; transcytosis [GO:0045056]	hit with GO BP
GN003777	Chromosome_1A	570	3	6	36.8421052631579	0.3175782338192961	47.05882352941177	6	0.5	45.23809523809524	4	0.5	50	2	0.5	33.408577878103834	29	0.2413793103448276	sparse (10-50%)	Q78S06	Protein SYS1 homolog	Golgi to endosome transport [GO:0006895]; Golgi to plasma membrane protein transport [GO:0043001]; protein localization to Golgi apparatus [GO:0034067]	hit with GO BP
GN003778	Chromosome_1A	3835	4	47	34.39374185136897	0.415686518698917	91.32824427480917	46	0.9782608695652174	88.54489164086688	6	1	91.63279132791328	40	0.975	33.90705679862307	28	0.25	methylated (>=50%)	P80971	Cytochrome c oxidase subunit 4 isoform 2, mitochondrial (Cytochrome c oxidase subunit IV isoform 2) (COX IV-2)	mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	hit with GO BP
GN003779	Chromosome_1A	17438	11	220	34.992545016630345	0.4128125596872991	78.43353152756367	214	0.8785046728971962	73.47242921013412	10	0.9	78.69054972205065	204	0.8774509803921569	11.464585834333734	25	0.12	methylated (>=50%)	Q9NUD7	Uncharacterized protein C20orf96	NA	hit, no GO BP
GN003780	Chromosome_1A	18228	22	241	36.24094799210007	0.40326600678849855	90.02919798720258	241	0.9626556016597511	89.73238667394867	83	0.9759036144578314	90.11660635303579	158	0.9556962025316456	13.785046728971963	26	0.15384615384615385	methylated (>=50%)	Q924T7	E3 ubiquitin-protein ligase RNF31 (EC 2.3.2.31) (HOIL-1-interacting protein) (HOIP) (Putative Ariadne-like ubiquitin ligase) (PAUL) (RING finger protein 31) (RING-type E3 ubiquitin transferase RNF31)	canonical NF-kappaB signal transduction [GO:0007249]; CD40 signaling pathway [GO:0023035]; defense response to bacterium [GO:0042742]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of necroptotic process [GO:0060546]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of xenophagy [GO:1904417]; protein linear polyubiquitination [GO:0097039]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; T cell receptor signaling pathway [GO:0050852]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN003781	Chromosome_1A	25791	13	417	36.233569849947656	0.49382491965531033	85.31394111387017	328	0.948170731707317	86.00077130736598	50	0.88	85.1895817331192	278	0.960431654676259	53.7650989462863	46	0.5652173913043478	methylated (>=50%)	E2RYF8	Targeting protein for Xklp2 homolog (TPX2 homolog) (Microtubule-associated protein TPX2 homolog)	regulation of mitotic spindle organization [GO:0060236]	hit with GO BP
GN003782	Chromosome_1A	25070	6	299	35.596330275229356	0.37667558381743166	74.1014096981327	209	0.8086124401913876	62.683438155136265	18	0.4444444444444444	74.96625645097261	191	0.8429319371727748	89.55665024630542	27	0.8888888888888888	methylated (>=50%)	C3YFB4	Anamorsin homolog (Fe-S cluster assembly protein DRE2 homolog)	iron-sulfur cluster assembly [GO:0016226]	hit with GO BP
GN003783	Chromosome_1A	372	1	12	48.38709677419355	0.5513833992094862	0.33444816053511706	11	0	0.33444816053511706	11	0	NA	NA	NA	1.5625	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003784	Chromosome_1A	13266	12	140	33.860998040102515	0.3699779296941533	79.64827684016451	133	0.8947368421052632	77.87823990355636	34	0.8529411764705882	80.19287833827893	99	0.9090909090909091	58.92286627110908	68	0.5147058823529411	methylated (>=50%)	F1QXM5	D-lactate dehydrogenase, mitochondrial (DLD) (Lactate dehydrogenase D) (EC 1.1.98.-)	lactate catabolic process [GO:1903457]	hit with GO BP
GN003785	Chromosome_1A	10617	5	208	34.991052086276724	0.6420339144678122	84.83805241340546	208	0.8413461538461539	86.65620094191523	9	0.8888888888888888	84.75286849073257	199	0.8391959798994975	7.064676616915423	17	0.11764705882352941	methylated (>=50%)	O46160	Large ribosomal subunit protein eL14 (60S ribosomal protein L14)	ribosomal large subunit biogenesis [GO:0042273]; translation [GO:0006412]	hit with GO BP
GN003789	Chromosome_1A	18502	15	169	33.01264728137499	0.3354353032247655	81.44135657089025	163	0.901840490797546	73.9329268292683	21	0.8095238095238095	82.50026873051704	142	0.9154929577464789	0.5612722170252572	51	0	methylated (>=50%)	Q922B6	E3 ubiquitin-protein ligase TRAF7 (EC 2.3.2.-) (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TRAF7) (TNF receptor-associated factor 7)	apoptotic process [GO:0006915]; canonical NF-kappaB signal transduction [GO:0007249]; cellular response to interleukin-6 [GO:0071354]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein sumoylation [GO:0033235]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; protein K29-linked ubiquitination [GO:0035519]; protein ubiquitination [GO:0016567]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of protein localization [GO:0032880]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003788	Chromosome_1A	4496	7	48	36.4991103202847	0.3220880321419403	85.71428571428571	47	0.9361702127659575	90.11124845488257	33	0.9696969696969697	76.62835249042146	14	0.8571428571428571	92.41540256709452	18	1	methylated (>=50%)	Q9D5D8	Chromodomain Y-like protein 2 (CDY-like 2)	NA	hit, no GO BP
GN003787	Chromosome_1A	5112	9	55	33.07902973395931	0.3944953613541591	84.66019417475728	55	0.9090909090909091	88.58173076923077	15	0.9333333333333333	83.48359177785791	40	0.9	18.39080459770115	25	0.24	methylated (>=50%)	O75521	Enoyl-CoA delta isomerase 2 (EC 5.3.3.8) (DRS-1) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (Diazepam-binding inhibitor-related protein 1) (DBI-related protein 1) (Dodecenoyl-CoA isomerase) (Hepatocellular carcinoma-associated antigen 88) (Peroxisomal 3,2-trans-enoyl-CoA isomerase) (pECI) (Renal carcinoma antigen NY-REN-1)	fatty acid beta-oxidation [GO:0006635]; fatty acid catabolic process [GO:0009062]	hit with GO BP
GN003790	Chromosome_1A	513	1	13	42.69005847953216	0.5564919893190922	0.7905138339920948	13	0	0.7905138339920948	13	0	NA	NA	NA	0.45901639344262296	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003791	Chromosome_1A	933	1	45	44.158628081457664	0.9953769559032717	0.5181347150259067	45	0	0.5181347150259067	45	0	NA	NA	NA	0.8288639687957094	31	0	unmethylated (<10%)	P25932	Protein escargot (Protein fleabag)	asymmetric neuroblast division [GO:0055059]; branch fusion, open tracheal system [GO:0035147]; cell fate determination [GO:0001709]; cell fate specification [GO:0001708]; central nervous system development [GO:0007417]; epithelial cell migration, open tracheal system [GO:0007427]; epithelial to mesenchymal transition [GO:0001837]; genital disc development [GO:0035215]; germ-line stem cell population maintenance [GO:0030718]; gravitaxis [GO:0042332]; intestinal stem cell homeostasis [GO:0036335]; maintenance of imaginal histoblast diploidy [GO:0007489]; negative regulation of DNA endoreduplication [GO:0032876]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; open tracheal system development [GO:0007424]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of neuroblast proliferation [GO:0002052]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of compound eye pigmentation [GO:0048076]; regulation of DNA-templated transcription [GO:0006355]; regulation of neural precursor cell proliferation [GO:2000177]; response to nicotine [GO:0035094]; somatic stem cell population maintenance [GO:0035019]; wing disc development [GO:0035220]	hit with GO BP
GN003792	Chromosome_1A	492	1	22	42.27642276422764	1.0166244012397858	0.3448275862068966	22	0	0.3448275862068966	22	0	NA	NA	NA	1.7001545595054095	57	0	unmethylated (<10%)	P58390	Small conductance calcium-activated potassium channel protein 2 (SK2) (SKCa 2) (SKCa2) (KCa2.2)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic ion transport [GO:0006811]; positive regulation of potassium ion transport [GO:0043268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of potassium ion transmembrane transport [GO:1901379]	hit with GO BP
GN003793	Chromosome_1A	1380	1	54	42.028985507246375	0.891696880496823	0.35874439461883406	54	0	0.35874439461883406	54	0	NA	NA	NA	0.5401234567901234	41	0	unmethylated (<10%)	P58390	Small conductance calcium-activated potassium channel protein 2 (SK2) (SKCa 2) (SKCa2) (KCa2.2)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic ion transport [GO:0006811]; positive regulation of potassium ion transport [GO:0043268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of potassium ion transmembrane transport [GO:1901379]	hit with GO BP
GN003794	Chromosome_1A	1973	2	84	40.598073998986315	1.0338219699332543	1.2609457092819614	84	0	1.5384615384615385	70	0	0.4225352112676056	14	0	1.0498687664041995	48	0	unmethylated (<10%)	P58390	Small conductance calcium-activated potassium channel protein 2 (SK2) (SKCa 2) (SKCa2) (KCa2.2)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic ion transport [GO:0006811]; positive regulation of potassium ion transport [GO:0043268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of potassium ion transmembrane transport [GO:1901379]	hit with GO BP
GN003811	Chromosome_1A	1078	2	15	38.49721706864564	0.3833025174228417	93.42770475227502	15	1	94.35028248587571	14	1	85.57692307692308	1	1	80.78575813382443	18	0.8333333333333334	methylated (>=50%)	Q9D0S4	Neuralized-like protein 2	intracellular signal transduction [GO:0035556]; myofibril assembly [GO:0030239]; protein ubiquitination [GO:0016567]; sarcomere organization [GO:0045214]	hit with GO BP
GN003810	Chromosome_1A	25209	17	405	34.89626720615653	0.5288494560327452	56.74531496951908	325	0.52	85.40925266903915	31	0.9354838709677419	53.7305053025577	294	0.47619047619047616	68.05111821086263	30	0.8666666666666667	methylated (>=50%)	Q6DC53	Cytoplasmic tRNA 2-thiolation protein 2	protein urmylation [GO:0032447]; tRNA thio-modification [GO:0034227]; tRNA wobble position uridine thiolation [GO:0002143]; tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN003809	Chromosome_1A	528	1	25	50.378787878787875	1	70.14028056112224	25	0.88	70.14028056112224	25	0.88	NA	NA	NA	79.3984962406015	29	0.896551724137931	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003808	Chromosome_1A	7079	2	84	36.78485661816641	0.35077630957999056	60.498409331919405	84	0.7380952380952381	81.65503489531406	39	0.9487179487179487	52.834958468761286	45	0.5555555555555556	22.08706786171575	23	0.043478260869565216	methylated (>=50%)	Q63540	Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)	adult locomotory behavior [GO:0008344]; brain development [GO:0007420]; excitatory postsynaptic potential [GO:0060079]; learning [GO:0007612]; lung alveolus development [GO:0048286]; memory [GO:0007613]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of insulin-like growth factor receptor signaling pathway [GO:0043569]; negative regulation of phosphorylation [GO:0042326]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nuclear export [GO:0051168]; positive regulation of glial cell proliferation [GO:0060252]; positive regulation of transcription by RNA polymerase II [GO:0045944]; social behavior [GO:0035176]; visual learning [GO:0008542]	hit with GO BP
GN003807	Chromosome_1A	8606	8	105	32.8491749941901	0.46109170399262767	90.10572826258482	100	0.98	94.77977161500816	22	1	88.98454314224222	78	0.9743589743589743	68.82267441860465	20	0.65	methylated (>=50%)	Q5R4X4	Translocon-associated protein subunit alpha (TRAP-alpha) (Signal sequence receptor subunit alpha) (SSR-alpha)	NA	hit, no GO BP
GN003806	Chromosome_1A	285	1	11	47.36842105263158	0.6911375661375662	0.7936507936507936	11	0	0.7936507936507936	11	0	NA	NA	NA	1.8002322880371662	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003805	Chromosome_1A	5917	7	202	39.07385499408484	0.9046530937241477	0.6926406926406926	147	0	0.6516290726817042	58	0	0.7326007326007326	89	0	0.36483035388544327	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003804	Chromosome_1A	468	1	14	39.743589743589745	0.7703703703703704	1.2640449438202248	14	0	1.2640449438202248	14	0	NA	NA	NA	0.5787037037037037	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003802	Chromosome_1A	1014	1	47	43.49112426035503	0.9905225090410276	0.9287925696594427	47	0	0.9287925696594427	47	0	NA	NA	NA	0.6663890045814244	50	0	unmethylated (<10%)	Q04861	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]	canonical NF-kappaB signal transduction [GO:0007249]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN003801	Chromosome_1A	2093	4	14	34.209268991877686	0.22949561403508772	87.83351120597652	13	0.9230769230769231	91.96185286103542	9	1	72.9064039408867	4	0.75	30.53321417932678	43	0.3953488372093023	methylated (>=50%)	Q13546	Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Cell death protein RIP) (Receptor-interacting protein 1) (RIP-1)	activation of protein kinase activity [GO:0032147]; amyloid fibril formation [GO:1990000]; apoptotic process [GO:0006915]; canonical NF-kappaB signal transduction [GO:0007249]; cellular response to growth factor stimulus [GO:0071363]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to tumor necrosis factor [GO:0071356]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intracellular signal transduction [GO:0035556]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; necroptotic process [GO:0070266]; necroptotic signaling pathway [GO:0097527]; negative regulation of apoptotic process [GO:0043066]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; negative regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001240]; negative regulation of necroptotic process [GO:0060546]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-6-mediated signaling pathway [GO:0070105]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of JNK cascade [GO:0046330]; positive regulation of macrophage differentiation [GO:0045651]; positive regulation of miRNA processing [GO:1903800]; positive regulation of necroptotic process [GO:0060545]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of programmed cell death [GO:0043068]; positive regulation of programmed necrotic cell death [GO:0062100]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; programmed necrotic cell death [GO:0097300]; response to oxidative stress [GO:0006979]; response to tumor necrosis factor [GO:0034612]; ripoptosome assembly [GO:0097343]; ripoptosome assembly involved in necroptotic process [GO:1901026]; T cell apoptotic process [GO:0070231]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN003800	Chromosome_1A	1018	1	12	40.078585461689585	0.31074481074481075	90.32597266035752	12	1	90.32597266035752	12	1	NA	NA	NA	87.80353200883002	29	0.9310344827586207	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003799	Chromosome_1A	7148	10	73	34.988808058198096	0.33380544243275645	86.13796133567662	73	0.9178082191780822	93.88366124893071	45	1	77.95844625112917	28	0.7857142857142857	65.48064918851436	33	0.5151515151515151	methylated (>=50%)	Q8BZ25	Ankyrin repeat and protein kinase domain-containing protein 1 (EC 2.7.11.1)	cellular response to retinoic acid [GO:0071300]; regulation of cell cycle process [GO:0010564]	hit with GO BP
GN003798	Chromosome_1A	18931	9	323	35.65580265173525	0.5381216113358108	78.5586283721606	319	0.8746081504702194	68.7062937062937	33	0.8484848484848485	79.45169299033331	286	0.8776223776223776	53.36969224776003	62	0.6612903225806451	methylated (>=50%)	Q503C8	NudC domain-containing protein 1	NA	hit, no GO BP
GN003797	Chromosome_1A	947	2	7	33.89651531151003	0.2576369996113486	90.43824701195219	7	1	87.38738738738739	4	1	92.85714285714286	3	1	25.75838211814795	38	0.18421052631578946	methylated (>=50%)	Q04310	Uncharacterized protein SCO4629	NA	hit, no GO BP
GN003796	Chromosome_1A	2449	3	35	34.58554512045733	0.47796823768206453	72.63129399025446	35	1	81.61616161616162	7	1	71.24101281650516	28	1	2.763819095477387	27	0	methylated (>=50%)	Q9CR22	Transmembrane protein 42	NA	hit, no GO BP
GN003795	Chromosome_1A	7204	8	186	36.2576346474181	0.7858858388596907	0.9299279633267845	167	0	0.4837595024187975	35	0	1.0342598577892697	132	0	0.7592534008225246	68	0	unmethylated (<10%)	Q99L04	Dehydrogenase/reductase SDR family member 1 (EC 1.1.1.-) (Short chain dehydrogenase/reductase family 19C member 1) (Protein SDR19C1)	NA	hit, no GO BP
GN001637	Chromosome_1A	327	1	18	47.09480122324159	0.9927475122280317	0.6666666666666666	18	0	0.6666666666666666	18	0	NA	NA	NA	0.8946322067594433	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003767	Chromosome_1A	12407	10	147	33.98887724671556	0.41231178033658106	88.1909220965015	144	0.9444444444444444	92.32995658465991	12	1	87.78222349242641	132	0.9393939393939394	79.55894826123834	17	0.7647058823529411	methylated (>=50%)	P00507	Aspartate aminotransferase, mitochondrial (mAspAT) (EC 2.6.1.1) (EC 2.6.1.7) (Fatty acid-binding protein) (FABP-1) (Glutamate oxaloacetate transaminase 2) (Kynurenine aminotransferase 4) (Kynurenine aminotransferase IV) (Kynurenine--oxoglutarate transaminase 4) (Kynurenine--oxoglutarate transaminase IV) (Plasma membrane-associated fatty acid-binding protein) (FABPpm) (Transaminase A)	2-oxoglutarate metabolic process [GO:0006103]; amino acid metabolic process [GO:0006520]; aspartate metabolic process [GO:0006531]; dicarboxylic acid metabolic process [GO:0043648]; fatty acid transport [GO:0015908]; female pregnancy [GO:0007565]; glutamate metabolic process [GO:0006536]; L-asparagine biosynthetic process [GO:0070981]; L-aspartate biosynthetic process [GO:0006532]; L-aspartate catabolic process [GO:0006533]; L-glutamate biosynthetic process [GO:0097054]; L-glutamate catabolic process [GO:0006538]; L-glutamine catabolic process [GO:0006543]; lactation [GO:0007595]; malate-aspartate shuttle [GO:0043490]; oxaloacetate metabolic process [GO:0006107]; response to ethanol [GO:0045471]; response to insulin [GO:0032868]; response to muscle activity [GO:0014850]	hit with GO BP
GN003766	Chromosome_1A	3747	6	50	38.190552441953564	0.36603950530449564	88.64708015959376	50	0.98	89.1156462585034	34	1	87.8147029204431	16	0.9375	53.93474088291747	10	0.5	methylated (>=50%)	Q91766	Hepatocyte nuclear factor 4-alpha (HNF-4-alpha) (Nuclear receptor subfamily 2 group A member 1)	cell differentiation [GO:0030154]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]	hit with GO BP
GN003765	Chromosome_1A	4647	5	46	35.59285560576716	0.3131433727932872	78.97227856659906	46	0.8695652173913043	90.51094890510949	17	1	73.4367183591796	29	0.7931034482758621	66.66666666666667	52	0.7692307692307693	methylated (>=50%)	A6QQZ0	Ganglioside-induced differentiation-associated protein 1 (GDAP1)	mitochondrial fission [GO:0000266]; mitochondrial fusion [GO:0008053]	hit with GO BP
GN003764	Chromosome_1A	459	1	7	41.61220043572985	0.3606060606060606	94.42724458204334	7	1	94.42724458204334	7	1	NA	NA	NA	94.40184049079754	23	1	methylated (>=50%)	Q96S44	EKC/KEOPS complex subunit TP53RK (EC 3.6.-.-) (Atypical serine/threonine protein kinase TP53RK) (Nori-2) (TP53-regulating kinase) (EC 2.7.11.1) (p53-related protein kinase)	maintenance of translational fidelity [GO:1990145]; protein phosphorylation [GO:0006468]; regulation of signal transduction by p53 class mediator [GO:1901796]; tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]	hit with GO BP
GN003763	Chromosome_1A	1023	1	20	40.66471163245357	0.4777806319034164	33.64269141531322	20	0.3	33.64269141531322	20	0.3	NA	NA	NA	25.56149732620321	30	0.2	sparse (10-50%)	Q7ZWB7	BBSome complex member BBS5 (Bardet-Biedl syndrome 5 protein homolog)	camera-type eye development [GO:0043010]; camera-type eye photoreceptor cell development [GO:0062139]; cilium assembly [GO:0060271]; gastrulation [GO:0007369]; heart looping [GO:0001947]; Kupffer's vesicle development [GO:0070121]; melanosome transport [GO:0032402]; pigment granule aggregation in cell center [GO:0051877]; pronephros formation [GO:0072116]	hit with GO BP
GN003762	Chromosome_1A	16578	13	196	33.321269151888046	0.4275907809650141	87.26895119418484	175	0.9714285714285714	93.51351351351352	18	1	86.60539919586445	157	0.9681528662420382	94.43585780525503	13	1	methylated (>=50%)	Q6AYR2	Protein NDRG3 (N-myc downstream-regulated gene 3 protein)	decidualization [GO:0046697]; signal transduction [GO:0007165]	hit with GO BP
GN003761	Chromosome_1A	249	1	4	45.78313253012048	0.3127158555729984	90.35087719298245	4	1	90.35087719298245	4	1	NA	NA	NA	83.793410507569	22	0.9545454545454546	NA	NA	NA	NA	no Swiss-Prot hit
GN003760	Chromosome_1A	1808	4	56	41.150442477876105	0.7456603551254576	0.38819875776397517	48	0	0.418848167539267	37	0	0.3003003003003003	11	0	0.5992010652463382	30	0	unmethylated (<10%)	Q9Y5Y6	Suppressor of tumorigenicity 14 protein (EC 3.4.21.109) (Matriptase) (Membrane-type serine protease 1) (MT-SP1) (Prostamin) (Serine protease 14) (Serine protease TADG-15) (Tumor-associated differentially-expressed gene 15 protein)	keratinocyte differentiation [GO:0030216]; protein processing [GO:0016485]; proteolysis [GO:0006508]	hit with GO BP
GN003759	Chromosome_1A	20550	14	278	35.94647201946472	0.41964807122315634	84.19909709126236	277	0.9386281588447654	64.8626817447496	24	0.7916666666666666	85.67123793124654	253	0.9525691699604744	0.5599472990777339	49	0	methylated (>=50%)	A2AV36	Protein arginine N-methyltransferase 7 (EC 2.1.1.321) (Histone-arginine N-methyltransferase PRMT7) ([Myelin basic protein]-arginine N-methyltransferase PRMT7)	cytoskeleton organization [GO:0007010]; genomic imprinting [GO:0071514]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN003758	Chromosome_1A	560	3	8	33.035714285714285	0.5304286052569264	92.98701298701299	8	1	95.66787003610108	6	1	86.11111111111111	2	1	87.70161290322581	35	0.9142857142857143	methylated (>=50%)	O95707	Ribonuclease P protein subunit p29 (hPOP4)	RNA processing [GO:0006396]; tRNA 5'-leader removal [GO:0001682]	hit with GO BP
GN003757	Chromosome_1A	14080	10	185	36.27130681818182	0.4012341400222121	91.90947666195191	178	0.9887640449438202	89.2608089260809	27	0.9629629629629629	92.32362883000764	151	0.9933774834437086	45.17958412098299	14	0.5714285714285714	methylated (>=50%)	A1L252	Ran-binding protein 9 (RanBP9)	cytoskeleton organization [GO:0007010]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; retina development in camera-type eye [GO:0060041]	hit with GO BP
GN003756	Chromosome_1A	7850	15	83	33.031847133757964	0.3901515695883573	75.39608574091332	83	0.8554216867469879	82.32098765432099	33	0.9393939393939394	71.19760479041916	50	0.8	0.8366800535475234	49	0	methylated (>=50%)	Q99P25	Translin-associated factor X-interacting protein 1 (Trax-interacting protein 1)	NA	hit, no GO BP
GN003755	Chromosome_1A	3229	3	25	36.72963765871787	0.2295639067809865	89.17716827279466	25	1	90.03880983182407	16	1	88.02083333333333	9	1	71.66482910694597	14	0.7857142857142857	methylated (>=50%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN003754	Chromosome_1A	16478	8	249	36.667071246510496	0.4503339620560275	89.53392847362944	230	0.9565217391304348	88.55397148676171	41	0.975609756097561	89.68615540369527	189	0.9523809523809523	30.20618556701031	34	0.29411764705882354	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003753	Chromosome_1A	14424	28	108	34.6159179145868	0.25318810942697406	93.22932444713723	108	1	94.44268021594156	57	1	92.12279177526788	51	1	86.48180242634315	13	0.9230769230769231	methylated (>=50%)	Q14703	Membrane-bound transcription factor site-1 protease (EC 3.4.21.112) (Endopeptidase S1P) (Subtilisin/kexin-isozyme 1) (SKI-1)	ATF6-mediated unfolded protein response [GO:0036500]; endoplasmic reticulum unfolded protein response [GO:0030968]; lysosome organization [GO:0007040]; membrane protein intracellular domain proteolysis [GO:0031293]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; regulation of cholesterol biosynthetic process [GO:0045540]; regulation of vesicle-mediated transport [GO:0060627]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN003752	Chromosome_1A	30994	28	421	35.326192166225724	0.43770157592336983	91.53350368025629	414	0.966183574879227	90.12496937025239	95	0.9368421052631579	91.79313459801264	319	0.9749216300940439	66.31407648494711	26	0.6538461538461539	methylated (>=50%)	Q9Y2L5	Trafficking protein particle complex subunit 8 (Protein TRS85 homolog)	collagen biosynthetic process [GO:0032964]; COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; vesicle tethering [GO:0099022]	hit with GO BP
GN003751	Chromosome_1A	1009	3	34	39.841427155599604	0.849894710764276	0.33852403520649965	34	0	0.4098360655737705	25	0	0.1996007984031936	9	0	0.5410279531109107	52	0	unmethylated (<10%)	Q2NL00	Glutathione S-transferase theta-1 (EC 2.5.1.18) (GST class-theta-1)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN003750	Chromosome_1A	927	1	59	45.30744336569579	1.24248619914128	0.25853154084798347	59	0	0.25853154084798347	59	0	NA	NA	NA	13.741598207617626	21	0.09523809523809523	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003748	Chromosome_1A	10633	13	99	35.30518198062635	0.3007860628850308	78.52828989192625	99	0.9494949494949495	81.06741573033707	29	1	77.52659574468085	70	0.9285714285714286	87.92200232828871	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003749	Chromosome_1A	5950	7	77	36.11764705882353	0.39889634180318734	81.66692582802052	77	0.987012987012987	88.38912133891213	16	0.9375	80.4931506849315	61	1	91.07407407407408	36	1	methylated (>=50%)	Q8N4L2	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase (Type 2 PtdIns-4,5-P2 4-Ptase) (EC 3.1.3.78) (PtdIns-4,5-P2 4-Ptase II) (Transmembrane protein 55A)	negative regulation of phagocytosis [GO:0050765]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN003747	Chromosome_1A	11002	16	123	34.40283584802763	0.38158301376043313	92.12421242124212	123	0.991869918699187	90.33668561434193	40	0.975	92.74352370852901	83	1	78.38669950738917	32	0.90625	methylated (>=50%)	A4IFB6	CCR4-NOT transcription complex subunit 10	mRNA catabolic process [GO:0006402]; negative regulation of translation [GO:0017148]	hit with GO BP
GN003746	Chromosome_1A	2371	1	63	43.06199915647406	0.5810596335628428	76.11676249447147	63	0.6984126984126984	76.11676249447147	63	0.6984126984126984	NA	NA	NA	0.38412291933418696	37	0	methylated (>=50%)	D3ZVM4	E3 ubiquitin-protein ligase TRIM71 (EC 2.3.2.27) (Protein lin-41 homolog) (RING-type E3 ubiquitin transferase TRIM71) (Tripartite motif-containing protein 71)	3'-UTR-mediated mRNA destabilization [GO:0061158]; fibroblast growth factor receptor signaling pathway [GO:0008543]; G1/S transition of mitotic cell cycle [GO:0000082]; miRNA processing [GO:0035196]; miRNA-mediated gene silencing by inhibition of translation [GO:0035278]; negative regulation of translation [GO:0017148]; neural tube closure [GO:0001843]; neural tube development [GO:0021915]; positive regulation of miRNA-mediated gene silencing [GO:2000637]; post-transcriptional regulation of gene expression [GO:0010608]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein polyubiquitination [GO:0000209]; regulation of miRNA-mediated gene silencing [GO:0060964]; regulation of neural precursor cell proliferation [GO:2000177]; regulation of protein metabolic process [GO:0051246]; stem cell proliferation [GO:0072089]	hit with GO BP
GN003745	Chromosome_1A	1113	1	20	42.76729559748428	0.4075504860945825	1.6018306636155606	19	0	1.6018306636155606	19	0	NA	NA	NA	2.252614641995173	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003744	Chromosome_1A	387	1	16	44.18604651162791	0.9042056074766355	0.7490636704119851	16	0	0.7490636704119851	16	0	NA	NA	NA	22.49757045675413	60	0.23333333333333334	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003743	Chromosome_1A	40262	17	610	35.403109631910986	0.4840567087627619	83.98776812621875	610	0.9622950819672131	80.1487414187643	33	0.9090909090909091	84.14246196403873	577	0.9653379549393414	88.68886888688868	40	0.975	methylated (>=50%)	Q04336	Uncharacterized protein YMR196W	oligosaccharide metabolic process [GO:0009311]	hit with GO BP
GN003742	Chromosome_1A	16622	10	162	33.906870412706056	0.3393314018437908	82.38787630554987	162	0.845679012345679	90.5848787446505	30	0.9666666666666667	81.01386896221904	132	0.8181818181818182	36.81159420289855	13	0.07692307692307693	methylated (>=50%)	A5WWA0	E3 ubiquitin-protein ligase znrf3 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase znrf3) (Zinc/RING finger protein 3)	negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein ubiquitination [GO:0016567]; stem cell proliferation [GO:0072089]; ubiquitin-dependent protein catabolic process [GO:0006511]; Wnt receptor catabolic process [GO:0038018]	hit with GO BP
GN003741	Chromosome_1A	702	1	0	56.837606837606835	0	NA	0	NA	NA	NA	NA	NA	NA	NA	38.37084673097535	17	0.11764705882352941	NA	NA	NA	NA	no Swiss-Prot hit
GN003717	Chromosome_1A	43331	13	586	35.521912718377145	0.4291404030061704	84.80962662594133	575	0.9339130434782609	82.3529411764706	25	0.92	84.89261507472031	550	0.9345454545454546	92.59902710215427	66	1	methylated (>=50%)	Q7ZXK9	Notchless protein homolog 1	Notch signaling pathway [GO:0007219]; regulation of Notch signaling pathway [GO:0008593]; ribosomal large subunit assembly [GO:0000027]	hit with GO BP
GN003718	Chromosome_1A	2727	4	49	35.4968830216355	0.5784370170600891	91.16421228118922	49	1	90.85173501577287	9	1	91.2310286677909	40	1	89.81555733761026	39	1	methylated (>=50%)	Q9CQL5	Large ribosomal subunit protein uL18m (39S ribosomal protein L18, mitochondrial) (L18mt) (MRP-L18)	mitochondrial translation [GO:0032543]; rRNA import into mitochondrion [GO:0035928]	hit with GO BP
GN003719	Chromosome_1A	24565	5	204	37.8058212904539	0.23241611261806067	90.39934032277064	178	0.9887640449438202	93.4065934065934	17	1	89.91240076649329	161	0.9875776397515528	46.21161917384581	69	0.4927536231884058	methylated (>=50%)	Q5F4A9	ADP-ribosylation factor-like protein 6-interacting protein 4 (ARL-6-interacting protein 4) (Aip-4)	NA	hit, no GO BP
GN003720	Chromosome_1A	11239	7	163	37.583414894563575	0.4107034245892029	82.27146814404432	163	0.8343558282208589	68.38288614938361	38	0.6578947368421053	84.90048043925876	125	0.888	0.47830543218312266	52	0	methylated (>=50%)	Q99583	Max-binding protein MNT (Class D basic helix-loop-helix protein 3) (bHLHd3) (Myc antagonist MNT) (Protein ROX)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN003721	Chromosome_1A	3201	3	25	35.55139019056545	0.2555468270999387	83.28358208955224	25	0.92	NA	NA	NA	83.28358208955224	25	0.92	82.41308793456032	11	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003722	Chromosome_1A	510	1	21	39.21568627450981	1.1068623398098387	97.3026973026973	21	1	97.3026973026973	21	1	NA	NA	NA	96.68949771689498	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003723	Chromosome_1A	18582	17	250	34.73253686363147	0.4496341514051902	93.58800991661032	249	0.9839357429718876	96.14325068870524	27	1	93.36033382425136	222	0.9819819819819819	73.02052785923753	48	0.7291666666666666	methylated (>=50%)	Q9Y6X9	ATPase MORC2 (EC 3.6.1.-) (MORC family CW-type zinc finger protein 2) (Zinc finger CW-type coiled-coil domain protein 1)	chromatin remodeling [GO:0006338]; constitutive heterochromatin formation [GO:0140719]; DNA damage response [GO:0006974]; transposable element silencing by heterochromatin formation [GO:0141005]	hit with GO BP
GN003724	Chromosome_1A	6465	8	59	35.20494972931168	0.2991928652108434	94.74878444084278	59	1	94.75890985324948	13	1	94.74693251533742	46	1	84.76710029374738	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003725	Chromosome_1A	10228	4	155	34.77708251857646	0.5025343219143561	91.22367966862271	155	1	95.08928571428571	15	1	90.9857090509344	140	1	77.52442996742671	12	1	methylated (>=50%)	Q9Y6X9	ATPase MORC2 (EC 3.6.1.-) (MORC family CW-type zinc finger protein 2) (Zinc finger CW-type coiled-coil domain protein 1)	chromatin remodeling [GO:0006338]; constitutive heterochromatin formation [GO:0140719]; DNA damage response [GO:0006974]; transposable element silencing by heterochromatin formation [GO:0141005]	hit with GO BP
GN003726	Chromosome_1A	8219	7	259	36.026280569412336	0.9785567315507078	0.6150978564771669	258	0	0.7333908541846419	58	0	0.5951948900341149	200	0	0.4810583283223091	52	0	unmethylated (<10%)	P79779	T-box-containing protein TBX6L	anatomical structure morphogenesis [GO:0009653]; cell fate specification [GO:0001708]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003727	Chromosome_1A	14615	11	241	35.579883681149504	0.5237179803622206	51.32993014508329	225	0.5511111111111111	95.30658591975777	23	1	47.04798407901526	202	0.5	1.0507880910683012	39	0	methylated (>=50%)	B0S6U7	GTPase Era, mitochondrial (ERA-like protein 1)	ribosomal small subunit assembly [GO:0000028]	hit with GO BP
GN003728	Chromosome_1A	20894	12	169	33.143486168277974	0.2954617642796347	70.1042076287849	166	0.7831325301204819	61.16504854368932	11	0.7272727272727273	70.58092575333954	155	0.7870967741935484	15.39491298527443	14	0.21428571428571427	methylated (>=50%)	Q86P97	Signal peptide peptidase-like (EC 3.4.23.-) (Intramembrane protease SppL)	membrane protein proteolysis [GO:0033619]; protein processing [GO:0016485]	hit with GO BP
GN003729	Chromosome_1A	11036	6	170	34.64117433852845	0.5174395770726046	76.2151144559423	155	0.832258064516129	42.71708683473389	17	0.47058823529411764	80.43785310734464	138	0.8768115942028986	0.62320230105465	33	0	methylated (>=50%)	Q9H7L9	Sin3 histone deacetylase corepressor complex component SDS3 (45 kDa Sin3-associated polypeptide) (Suppressor of defective silencing 3 protein homolog)	chromatin remodeling [GO:0006338]; negative regulation of cell migration [GO:0030336]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of stem cell population maintenance [GO:1902455]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of stem cell population maintenance [GO:1902459]; substantia nigra development [GO:0021762]	hit with GO BP
GN003730	Chromosome_1A	6263	4	93	33.19495449465113	0.5391870800756119	71.30730050933786	79	0.810126582278481	69.32907348242811	6	0.6666666666666666	71.44805637644919	73	0.821917808219178	0.6645569620253164	52	0	methylated (>=50%)	Q3MHP1	Ubiquitin-conjugating enzyme E2 L3 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme L3) (Ubiquitin carrier protein L3) (Ubiquitin-protein ligase L3)	cell cycle phase transition [GO:0044770]; cell population proliferation [GO:0008283]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to steroid hormone stimulus [GO:0071383]; protein K11-linked ubiquitination [GO:0070979]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of DNA-templated transcription [GO:0006355]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN003731	Chromosome_1A	4502	3	152	37.49444691248334	0.9611875224739302	0.5390028447372361	152	0	0.39154267815191857	60	0	0.6303030303030303	92	0	0.6868131868131868	58	0	unmethylated (<10%)	Q8K2J9	BTB/POZ domain-containing protein 6	neurogenesis [GO:0022008]	hit with GO BP
GN003732	Chromosome_1A	2405	2	89	43.24324324324324	0.7928796595038505	0.484368119771026	89	0	0.4972875226039783	87	0	0	2	0	0.39554117224020136	62	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN003733	Chromosome_1A	25635	15	405	35.34230544177882	0.506900161002292	81.662083068895	386	0.9041450777202072	89.3377759266972	38	0.9736842105263158	80.95219752705982	348	0.896551724137931	47.25648660144619	36	0.5277777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003734	Chromosome_1A	16939	15	175	35.87578959796918	0.3274979030942286	92.33536524432897	174	0.9540229885057471	93.76664890783165	72	0.9583333333333334	91.47609147609148	102	0.9509803921568627	37.96082949308756	50	0.44	methylated (>=50%)	Q5F3P8	Histone-lysine N-methyltransferase SETD1B (EC 2.1.1.354) (SET domain-containing protein 1B)	NA	hit, no GO BP
GN003735	Chromosome_1A	49411	35	495	34.45791422962498	0.34050664205581743	83.61363036013032	494	0.9331983805668016	90.42370805780064	78	0.9871794871794872	82.68640789649193	416	0.9230769230769231	29.490806223479492	23	0.2608695652173913	methylated (>=50%)	F8VPZ3	Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.4.19.12) (Deubiquitinating enzyme 32) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32)	positive regulation of TORC1 signaling [GO:1904263]; protein deubiquitination [GO:0016579]	hit with GO BP
GN003736	Chromosome_1A	15548	6	266	34.332390018008745	0.5806757782839788	82.03736081715284	265	0.9433962264150944	93.32161687170475	9	1	81.73399480274037	256	0.94140625	47.985820174025136	48	0.5208333333333334	methylated (>=50%)	Q3T0M7	Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1)	nuclear export [GO:0051168]	hit with GO BP
GN003737	Chromosome_1A	17681	12	211	34.200554267292574	0.40912980062728926	87.15440582053355	206	0.941747572815534	73.6429770565193	33	0.7878787878787878	89.43588774449589	173	0.9710982658959537	46.820428336079075	41	0.5121951219512195	methylated (>=50%)	Q5BLE8	All-trans-retinol 13,14-reductase (EC 1.3.99.23) (All-trans-13,14-dihydroretinol saturase A) (RetSat A) (All-trans-retinol 7,8-reductase)	retinol metabolic process [GO:0042572]	hit with GO BP
GN003738	Chromosome_1A	13948	12	196	37.948092916547175	0.39441307962163696	74.9420780609517	112	0.9017857142857143	65.59139784946237	32	0.78125	78.91795783591567	80	0.95	32.47631935047362	8	0.375	methylated (>=50%)	Q5BLE8	All-trans-retinol 13,14-reductase (EC 1.3.99.23) (All-trans-13,14-dihydroretinol saturase A) (RetSat A) (All-trans-retinol 7,8-reductase)	retinol metabolic process [GO:0042572]	hit with GO BP
GN003739	Chromosome_1A	15266	11	164	34.082274335123806	0.36993392200669056	86.63456296565509	158	0.9113924050632911	68.42105263157895	27	0.7407407407407407	89.94095544820182	131	0.9465648854961832	68.69443144595228	27	0.7777777777777778	methylated (>=50%)	Q8N3Y1	F-box/WD repeat-containing protein 8 (F-box and WD-40 domain-containing protein 8) (F-box only protein 29)	cell population proliferation [GO:0008283]; cilium assembly [GO:0060271]; Golgi organization [GO:0007030]; negative regulation of insulin receptor signaling pathway [GO:0046627]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN003740	Chromosome_1A	4035	6	42	36.30731102850062	0.3170175989943432	72.28284591881274	42	0.8809523809523809	70.68437180796731	23	0.9130434782608695	73.47560975609755	19	0.8421052631578947	82.44811818501583	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003868	Chromosome_1A	23056	15	256	36.714954892435806	0.3302899368702003	61.45676534537548	256	0.73828125	78.67368421052632	136	0.9338235294117647	50.11098779134295	120	0.5166666666666667	41.666666666666664	26	0.07692307692307693	methylated (>=50%)	Q96AY4	Tetratricopeptide repeat protein 28 (TPR repeat protein 28) (TPR repeat-containing big gene cloned at Keio)	regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN003867	Chromosome_1A	2280	1	53	38.026315789473685	0.6508461430741224	0.6172839506172839	53	0	0.6172839506172839	53	0	NA	NA	NA	3.0182232346241458	29	0	unmethylated (<10%)	Q5TAA0	Tetratricopeptide repeat protein 22 (TPR repeat protein 22)	NA	hit, no GO BP
GN003876	Chromosome_1A	7295	10	101	37.17614804660727	0.4043099247565783	90.07661437431594	94	0.9893617021276596	92.3920051579626	34	1	89.16306283388451	60	0.9833333333333333	53.59342915811088	15	0.5333333333333333	methylated (>=50%)	Q5R662	Low-density lipoprotein receptor-related protein 12 (LRP-12)	neuron migration [GO:0001764]; neuron projection development [GO:0031175]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN003875	Chromosome_1A	22657	14	294	35.64019949684424	0.4105501932393768	82.80919825978869	273	0.9120879120879121	92.01716738197425	23	0.9565217391304348	82.09045226130654	250	0.908	5.122494432071269	22	0	methylated (>=50%)	P41154	Heat shock factor protein (HSF) (Heat shock transcription factor) (HSTF)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003874	Chromosome_1A	549	1	17	50.27322404371585	0.7678321678321678	0.36855036855036855	17	0	0.36855036855036855	17	0	NA	NA	NA	0.7839127471029311	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003877	Chromosome_1A	3790	7	29	32.58575197889182	0.2889509327612678	51.77610333692142	21	0.42857142857142855	45.954692556634306	7	0.5714285714285714	54.67741935483871	14	0.35714285714285715	32.20338983050848	27	0.37037037037037035	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003889	Chromosome_1A	444	1	12	40.54054054054054	0.6617811451993542	0.45662100456621	12	0	0.45662100456621	12	0	NA	NA	NA	2.595419847328244	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003888	Chromosome_1A	3251	2	94	35.31221162719164	0.9290068004876165	0.6651884700665188	91	0	0.693107431651906	68	0	0.615595075239398	23	0	0.4707728520988623	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003887	Chromosome_1A	1050	1	32	39.80952380952381	0.7941009642654566	0.5102040816326531	32	0	0.5102040816326531	32	0	NA	NA	NA	0.3412969283276451	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003886	Chromosome_1A	531	1	12	39.35969868173258	0.6459854014598541	0.5509641873278237	12	0	0.5509641873278237	12	0	NA	NA	NA	0.8167432363450741	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003885	Chromosome_1A	968	2	9	34.09090909090909	0.32266666666666666	8.305647840531561	9	0	8.305647840531561	9	0	NA	NA	NA	1.1743981209630066	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003884	Chromosome_1A	465	1	7	39.354838709677416	0.3950242718446602	0	1	0	0	1	0	NA	NA	NA	0.8379888268156425	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003883	Chromosome_1A	786	1	8	44.910941475826974	0.2021215043394407	0	4	0	0	4	0	NA	NA	NA	2.3980815347721824	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003882	Chromosome_1A	387	1	8	50.90439276485788	0.32521008403361346	0	6	0	0	6	0	NA	NA	NA	0.8526187576126675	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003881	Chromosome_1A	387	1	8	51.42118863049095	0.3195046439628483	1.098901098901099	6	0	1.098901098901099	6	0	NA	NA	NA	1.6987542468856172	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003880	Chromosome_1A	786	1	8	44.656488549618324	0.20452771272443404	0	5	0	0	5	0	NA	NA	NA	0.6796941376380629	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003879	Chromosome_1A	768	1	10	44.921875	0.26216972758926743	1.271186440677966	9	0	1.271186440677966	9	0	NA	NA	NA	0.5780346820809249	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003878	Chromosome_1A	603	1	9	41.459369817578775	0.34875650665124347	0	3	0	0	3	0	NA	NA	NA	2.555480833893746	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003890	Chromosome_1A	1146	1	25	41.361256544502616	0.5221147012191788	94.50171821305842	25	1	94.50171821305842	25	1	NA	NA	NA	84.74164133738601	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003891	Chromosome_1A	797	1	0	49.3099121706399	0	NA	0	NA	NA	NA	NA	NA	NA	NA	88.50574712643679	10	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN003892	Chromosome_1A	5032	8	52	37.30127186009539	0.2970821317468607	53.34455195624737	52	0.5769230769230769	72.43852459016394	28	0.7857142857142857	40.04282655246253	24	0.3333333333333333	18.47181008902077	22	0.09090909090909091	methylated (>=50%)	Q61909	Protein CBFA2T1 (Protein MTG8)	DNA-templated transcription [GO:0006351]; fat cell differentiation [GO:0045444]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of neuron projection development [GO:0010977]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN003893	Chromosome_1A	2390	2	29	39.24686192468619	0.31524463183556883	93.74523264683448	29	1	94.88416988416988	24	1	89.45454545454545	5	1	70.12987012987013	3	1	methylated (>=50%)	Q61909	Protein CBFA2T1 (Protein MTG8)	DNA-templated transcription [GO:0006351]; fat cell differentiation [GO:0045444]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of neuron projection development [GO:0010977]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN003897	Chromosome_1A	13499	13	424	37.2249796281206	0.9074175304999854	1.084423305588585	419	0	0.6583111786302064	186	0	1.3408502209355477	233	0	0.4097161252560726	73	0	unmethylated (<10%)	Q9C5S2	Serine/threonine-protein kinase/endoribonuclease IRE1a (Endoplasmic reticulum-to-nucleus signaling 1-2) (Inositol-requiring protein 1-2) (AtIRE1-2) (Serine/threonine-protein kinase/endoribonuclease IRE1-2) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]	defense response to bacterium [GO:0042742]; endoplasmic reticulum unfolded protein response [GO:0030968]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; IRE1-mediated unfolded protein response [GO:0036498]; mRNA processing [GO:0006397]; protein autophosphorylation [GO:0046777]; response to endoplasmic reticulum stress [GO:0034976]; response to salicylic acid [GO:0009751]; RNA splicing [GO:0008380]	hit with GO BP
GN003896	Chromosome_1A	6079	3	179	39.430827438723476	0.7688781768642879	0.5260594252313687	179	0	0.5263723278547642	163	0	0.5230125523012552	16	0	0.3119151590767311	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003895	Chromosome_1A	5258	2	143	43.09623430962343	0.6120602638742364	0.8693289866883999	120	0	0.8756567425569177	111	0	0.7843137254901961	9	0	1.0242085661080074	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003894	Chromosome_1A	957	1	53	49.32079414838036	0.9109375	2.4866785079928952	52	0	2.4866785079928952	52	0	NA	NA	NA	2.5160335471139614	52	0	unmethylated (<10%)	Q0P8I7	GDP-D-glycero-alpha-D-manno-heptose dehydrogenase (EC 1.1.98.-)	capsule polysaccharide biosynthetic process [GO:0045227]; protein homotetramerization [GO:0051289]	hit with GO BP
GN003898	Chromosome_1A	9742	3	203	35.59843974543215	0.6628205970401374	81.59414396095974	200	0.915	92.05190592051906	18	1	80.42849394322907	182	0.9065934065934066	91.8	7	1	methylated (>=50%)	Q1MTD4	Uncharacterized protein C18orf19 homolog A	NA	hit, no GO BP
GN016084	Chromosome_1A	1028	1	22	45.91439688715953	0.4087105810065962	0.6479481641468683	22	0	0.6479481641468683	22	0	NA	NA	NA	1.0717230008244023	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018134	Chromosome_1A	2425	5	16	33.23711340206186	0.2389751170238975	21.8978102189781	6	0.16666666666666666	4.3478260869565215	2	0	25.43859649122807	4	0.25	1.3611615245009074	79	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003908	Chromosome_1A	24762	10	249	34.27832969873193	0.3425434358644328	68.670936325623245	238	0.8739495798319328	80.94777562862669	25	0.92	67.96013214625678	213	0.8685446009389671	0.6646216768916156	26	0	methylated (>=50%)	Q15427	Splicing factor 3B subunit 4 (Pre-mRNA-splicing factor SF3b 49 kDa subunit) (Spliceosome-associated protein 49) (SAP 49)	mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal snRNP assembly [GO:0000387]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN003907	Chromosome_1A	14999	6	203	38.702580172011466	0.36798020388308444	89.7140221402214	200	0.985	93.22420223787816	88	1	86.89723977386099	112	0.9732142857142857	81.07416879795396	12	0.9166666666666666	methylated (>=50%)	Q13029	PR domain zinc finger protein 2 (EC 2.1.1.-) (GATA-3-binding protein G3B) (Lysine N-methyltransferase 8) (MTB-ZF) (MTE-binding protein) (PR domain-containing protein 2) (Retinoblastoma protein-interacting zinc finger protein) (Zinc finger protein RIZ)	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003906	Chromosome_1A	25536	21	348	36.43092105263158	0.41195341188508156	91.37614678899082	346	0.9942196531791907	94.18907198612315	47	1	91.00150167494513	299	0.9933110367892977	84.8705501618123	39	0.9230769230769231	methylated (>=50%)	O35142	Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP) (p102)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN003905	Chromosome_1A	569	3	4	34.797891036906854	0.23243464052287582	18.367346938775512	4	0.25	18.367346938775512	4	0.25	NA	NA	NA	43.4476423759951	51	0.47058823529411764	NA	Q6UX40	Transmembrane protein 107	cilium assembly [GO:0060271]; embryonic digit morphogenesis [GO:0042733]; neural tube patterning [GO:0021532]; non-motile cilium assembly [GO:1905515]; protein localization to ciliary transition zone [GO:1904491]	hit with GO BP
GN003904	Chromosome_1A	1073	2	19	37.65144454799627	0.5080492424242424	44.168734491315135	19	0.42105263157894735	48.424543946932005	16	0.4375	31.527093596059114	3	0.3333333333333333	0.6780660377358491	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003903	Chromosome_1A	378	1	9	39.94708994708995	0.6	0.5847953216374269	9	0	0.5847953216374269	9	0	NA	NA	NA	0.8841732979664014	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003910	Chromosome_1A	246	1	3	45.52845528455285	0.2624466571834993	0.3937007874015748	3	0	0.3937007874015748	3	0	NA	NA	NA	0.40106951871657753	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003911	Chromosome_1A	1391	3	18	41.84040258806614	0.3361707841031149	0.5509641873278237	18	0	0.5859375	17	0	0	1	0	0.6864988558352403	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003912	Chromosome_1A	513	1	9	44.44444444444444	0.42801520348567723	0.4484304932735426	9	0	0.4484304932735426	9	0	NA	NA	NA	0.7747933884297521	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003913	Chromosome_1A	677	2	20	41.65435745937962	0.6811893142828395	0.8042895442359249	20	0	0.8746355685131195	19	0	0	1	0	0.9187620889748549	57	0	unmethylated (<10%)	Q7Z5L3	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1q/TNF-related protein 10)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; regulation of synapse maturation [GO:0090128]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN003914	Chromosome_1A	2903	2	94	36.72063382707544	0.9616478424048068	0.6654245408570668	94	0	0.5934718100890207	21	0	0.6811547194291274	73	0	0.33112582781456956	6	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN003915	Chromosome_1A	1116	1	51	43.81720430107527	0.9521865694114497	0.5809128630705395	51	0	0.5809128630705395	51	0	NA	NA	NA	0.5434782608695652	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003916	Chromosome_1A	10349	2	112	39.076239250169095	0.28428194703878695	83.42989571263035	112	0.9642857142857143	94.61016949152543	73	1	72.75962471692009	39	0.8974358974358975	95.54868624420402	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003917	Chromosome_1A	14741	15	160	34.258191438844044	0.37305623428569257	88.09894481923543	160	0.95	91.0204081632653	23	0.9565217391304348	87.7527329012286	137	0.948905109489051	0.8962264150943396	30	0	methylated (>=50%)	Q9QYJ0	DnaJ homolog subfamily A member 2 (mDj3)	cellular response to heat [GO:0034605]; protein refolding [GO:0042026]	hit with GO BP
GN003918	Chromosome_1A	6562	3	116	36.69612922889363	0.5264063468177392	82.62010165600918	116	0.9396551724137931	56.27329192546584	22	0.6818181818181818	86.62636947487722	94	1	0.56797583081571	103	0	methylated (>=50%)	Q5ZL13	Acyl-coenzyme A diphosphatase NUDT19 (EC 3.6.1.-) (EC 3.6.1.77) (Nucleoside diphosphate-linked moiety X motif 19) (Nudix motif 19)	butyryl-CoA catabolic process [GO:0044580]; coenzyme A catabolic process [GO:0015938]; malonyl-CoA catabolic process [GO:2001294]; medium-chain fatty-acyl-CoA catabolic process [GO:0036114]; propionyl-CoA metabolic process [GO:1902858]; succinyl-CoA catabolic process [GO:1901289]	hit with GO BP
GN003919	Chromosome_1A	28191	16	225	33.776737256571245	0.28079580225664563	81.20235869408889	225	0.9244444444444444	78.13299232736573	31	0.9032258064516129	81.59131421163507	194	0.9278350515463918	1.0362694300518134	44	0	methylated (>=50%)	P12955	Xaa-Pro dipeptidase (X-Pro dipeptidase) (EC 3.4.13.9) (Imidodipeptidase) (Peptidase D) (Proline dipeptidase) (Prolidase)	amino acid metabolic process [GO:0006520]; negative regulation of programmed cell death [GO:0043069]; proteolysis [GO:0006508]	hit with GO BP
GN003920	Chromosome_1A	868	2	37	44.93087557603687	0.8454026165468952	0.5434782608695652	37	0	0.5868544600938967	34	0	0	3	0	0.8531157270029673	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003921	Chromosome_1A	3199	5	70	36.136292591434824	0.6715368306148582	0.8632692843219159	70	0	0.898069151324652	49	0	0.8064516129032258	21	0	0.43731778425655976	35	0	unmethylated (<10%)	P00521	Tyrosine-protein kinase transforming protein Abl (EC 2.7.10.2) (V-abl)	NA	hit, no GO BP
GN003933	Chromosome_1A	15718	15	411	35.774271535818805	0.8173043737013155	0.6990316167511063	344	0	0.5405405405405406	80	0	0.7306006306237022	264	0	0.624512099921936	61	0	unmethylated (<10%)	Q13882	Protein-tyrosine kinase 6 (EC 2.7.10.2) (Breast tumor kinase) (Tyrosine-protein kinase BRK)	cell differentiation [GO:0030154]; cell migration [GO:0016477]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to retinoic acid [GO:0071300]; ERBB2 signaling pathway [GO:0038128]; intestinal epithelial cell differentiation [GO:0060575]; negative regulation of growth [GO:0045926]; negative regulation of protein tyrosine kinase activity [GO:0061099]; positive regulation of cell cycle [GO:0045787]; positive regulation of DNA replication [GO:0045740]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of neuron projection development [GO:0010976]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; tyrosine phosphorylation of STAT protein [GO:0007260]	hit with GO BP
GN003932	Chromosome_1A	12033	14	295	33.77378874761074	0.8599033008943904	1.0932181199266824	291	0	0.5172026085001125	104	0	1.3297626743004893	187	0	0.9745762711864406	54	0	unmethylated (<10%)	P10447	Tyrosine-protein kinase transforming protein Abl (EC 2.7.10.2) (V-abl)	cell communication [GO:0007154]; signaling [GO:0023052]	hit with GO BP
GN003931	Chromosome_1A	1691	6	73	41.51389710230633	1.0114547912655167	0.8033664881407804	73	0	0.8301404853128991	48	0	0.7633587786259542	25	0	0.9741634900465904	72	0	unmethylated (<10%)	P46197	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN003930	Chromosome_1A	1757	5	23	32.669322709163346	0.4971825787401575	60.153031194820485	23	0.6521739130434783	57.799442896935936	11	0.5454545454545454	61.8756371049949	12	0.75	2.8100412139378044	57	0	methylated (>=50%)	Q7F0J0	Probable calcium-binding protein CML13 (Calmodulin-like protein 13)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN003929	Chromosome_1A	11103	8	104	33.261280734936506	0.3400931056683951	80.20763563295378	102	0.9901960784313726	87.15901530272788	30	0.9666666666666667	77.86976952338331	72	1	3.090452261306533	49	0.02040816326530612	methylated (>=50%)	B1AZ99	OTU domain-containing protein 3 (EC 3.4.19.12)	cellular response to nutrient levels [GO:0031669]; energy homeostasis [GO:0097009]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; protein deubiquitination [GO:0016579]; protein K11-linked deubiquitination [GO:0035871]; protein K27-linked deubiquitination [GO:1990167]; protein K48-linked deubiquitination [GO:0071108]; protein K6-linked deubiquitination [GO:0044313]; protein stabilization [GO:0050821]; regulation of transcription by RNA polymerase II [GO:0006357]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]	hit with GO BP
GN003928	Chromosome_1A	2436	5	21	35.79638752052545	0.26992401857323767	89.8422090729783	21	1	91.25214408233276	13	1	87.93503480278422	8	1	94.0506329113924	12	1	methylated (>=50%)	B0BM36	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (EC 1.3.5.1) (Iron-sulfur subunit of complex II) (Ip) (Malate dehydrogenase [quinone] iron-sulfur subunit) (EC 1.1.5.-)	aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN003927	Chromosome_1A	2578	3	33	38.595810705973626	0.34373333333333334	86.02329450915141	33	0.9696969696969697	86.00451467268623	21	0.9523809523809523	86.04143947655398	12	1	87.04453441295547	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003926	Chromosome_1A	6742	5	155	37.511124295461286	0.6538881255052723	8.715669153833941	155	0.0064516129032258064	19.173363949483353	33	0.030303030303030304	7.037582903463522	122	0	0.4797208896641954	65	0	unmethylated (<10%)	E9QHT9	p53 apoptosis effector related to PMP-22	apoptotic process involved in blood vessel morphogenesis [GO:1902262]; cell-cell adhesion [GO:0098609]; regulation of apoptotic process [GO:0042981]; response to UV [GO:0009411]	hit with GO BP
GN003925	Chromosome_1A	972	1	22	40.22633744855967	0.5595269244858444	3.225806451612903	13	0	3.225806451612903	13	0	NA	NA	NA	1.1473646468268197	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003924	Chromosome_1A	47700	23	1331	36.658280922431864	0.8308163622955906	0.9512502352787873	1288	0	0.7912745936698032	96	0	0.9628674814803311	1192	0	0.47619047619047616	46	0	unmethylated (<10%)	P51871	Cytochrome P450 4F6 (EC 1.14.14.1) (CYPIVF6)	leukotriene metabolic process [GO:0006691]	hit with GO BP
GN003923	Chromosome_1A	585	1	17	41.70940170940171	0.6798605414273995	3.8227628149435273	17	0.058823529411764705	3.8227628149435273	17	0.058823529411764705	NA	NA	NA	65.47688706846108	66	0.696969696969697	unmethylated (<10%)	Q9DB15	Large ribosomal subunit protein bL12m (39S ribosomal protein L12, mitochondrial) (L12mt) (MRP-L12) [Cleaved into: Large ribosomal subunit protein bL12m, long mature form; Large ribosomal subunit protein bL12m, short mature form]	mitochondrial transcription [GO:0006390]; mitochondrial translation [GO:0032543]; positive regulation of DNA-templated transcription [GO:0045893]; translation [GO:0006412]	hit with GO BP
GN003922	Chromosome_1A	23717	17	338	35.69591432305941	0.4484351987641266	81.97125573151466	337	0.9495548961424333	87.93969849246231	24	0.9166666666666666	81.6327361563518	313	0.952076677316294	24.727272727272727	39	0.3333333333333333	methylated (>=50%)	Q7ZY69	Pescadillo homolog	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000466]; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN003716	Chromosome_1A	1398	4	47	41.55937052932761	0.7851304846572985	0.8013737836290784	47	0	0.8968609865470852	41	0	0.4889975550122249	6	0	0.43032108573320094	47	0	unmethylated (<10%)	P29030	Endochitinase (EC 3.2.1.14) (MF1 antigen)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	hit with GO BP
GN003949	Chromosome_1A	825	1	29	40.72727272727273	0.8624729632299928	0.28785261945883706	29	0	0.28785261945883706	29	0	NA	NA	NA	1.2894906511927788	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003950	Chromosome_1A	3626	7	26	36.127964699393274	0.22011879634645198	83.14285714285714	26	1	85.4586129753915	9	1	82.05666316894019	17	1	90.10060362173039	38	1	methylated (>=50%)	Q96GQ5	RUS family member 1	NA	hit, no GO BP
GN003714	Chromosome_1A	39162	20	436	36.14473213829733	0.34087854049173333	88.84366478082136	414	0.9782608695652174	91.97207678883072	46	1	88.5217937783364	368	0.9755434782608695	93.35347432024169	19	1	methylated (>=50%)	Q61097	Kinase suppressor of Ras 1 (mKSR1) (EC 2.7.11.1) (Protein Hb)	positive regulation of MAPK cascade [GO:0043410]; Ras protein signal transduction [GO:0007265]; regulation of cell population proliferation [GO:0042127]; regulation of MAP kinase activity [GO:0043405]	hit with GO BP
GN003713	Chromosome_1A	3830	5	59	34.62140992167102	0.5151264392970554	91.899852724595	59	0.9830508474576272	94.06175771971496	7	1	91.650698056392	52	0.9807692307692307	90.81920903954803	14	1	methylated (>=50%)	Q9D0F6	Replication factor C subunit 5 (Activator 1 36 kDa subunit) (A1 36 kDa subunit) (Activator 1 subunit 5) (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36)	DNA repair [GO:0006281]; DNA-templated DNA replication [GO:0006261]; positive regulation of DNA-directed DNA polymerase activity [GO:1900264]	hit with GO BP
GN003712	Chromosome_1A	477	2	13	38.36477987421384	0.7505446623093682	11.025641025641026	13	0	11.18421052631579	7	0	10.92436974789916	6	0	2.81019290307216	80	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003711	Chromosome_1A	225	1	3	39.111111111111114	0.3488372093023256	55.18672199170125	3	1	55.18672199170125	3	1	NA	NA	NA	94.78471801091571	56	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003953	Chromosome_1A	8974	3	118	37.185201693782034	0.38333351433339485	87.54270696452036	118	0.9830508474576272	87.8902953586498	110	0.9818181818181818	82.6	8	1	94.96753246753246	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003954	Chromosome_1A	672	1	16	43.154761904761905	0.519395198299599	92.45076586433261	16	1	92.45076586433261	16	1	NA	NA	NA	64.63730569948187	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003955	Chromosome_1A	4641	1	55	41.54277095453566	0.2758916990920882	95.74155653450808	55	1	95.74155653450808	55	1	NA	NA	NA	72.06557377049181	34	0.8529411764705882	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003956	Chromosome_1A	4996	10	61	39.67173738991193	0.3123520904885921	88.62472567666423	60	0.95	87.6632801161103	50	0.94	91.60419790104947	10	1	70.89430894308943	9	0.8888888888888888	methylated (>=50%)	Q5EAJ7	Major vault protein (MVP)	NA	hit, no GO BP
GN003957	Chromosome_1A	1047	1	21	42.21585482330468	0.4598155467720685	16.02972399150743	21	0	16.02972399150743	21	0	NA	NA	NA	17.04225352112676	69	0	sparse (10-50%)	Q9M146	UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 (EC 2.4.2.-) (Protein MALE GAMETOPHYTE DEFECTIVE 4) (Rhamnogalacturonan xylosyltransferase MGP4)	pollen tube development [GO:0048868]; rhamnogalacturonan II biosynthetic process [GO:0010306]	hit with GO BP
GN003706	Chromosome_1A	5005	5	106	33.98601398601399	0.7336781402552862	79.97061150672545	99	0.8585858585858586	39.53934740882917	7	0.2857142857142857	82.50060052846504	92	0.9021739130434783	2.3136246786632393	55	0	methylated (>=50%)	Q8WYH8	Inhibitor of growth protein 5 (p28ING5)	DNA replication-dependent chromatin disassembly [GO:0140889]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of growth [GO:0045926]; positive regulation of apoptotic process [GO:0043065]; positive regulation of apoptotic signaling pathway [GO:2001235]; protein acetylation [GO:0006473]; regulation of cell cycle [GO:0051726]; regulation of cell growth [GO:0001558]; regulation of developmental process [GO:0050793]; regulation of DNA biosynthetic process [GO:2000278]; regulation of DNA replication [GO:0006275]; regulation of DNA-templated transcription [GO:0006355]; regulation of hemopoiesis [GO:1903706]	hit with GO BP
GN003705	Chromosome_1A	28917	24	383	35.98921049901442	0.41938679737198875	90.75579279388572	375	0.944	89.95911692559281	126	0.8888888888888888	91.01751369936606	249	0.9718875502008032	0.5837912087912088	62	0	methylated (>=50%)	A1L0Y2	Neuralized-like protein 4	mitochondrial DNA repair [GO:0043504]	hit with GO BP
GN003959	Chromosome_1A	4884	9	134	35.647010647010646	0.8639341016197378	1.008777675881043	133	0	1.1235955056179776	47	0	0.9691629955947136	86	0	2.5845864661654137	65	0	unmethylated (<10%)	Q98943	Caspase-2 (CASP-2) (EC 3.4.22.55) (ICH-1L/1S) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]	apoptotic process [GO:0006915]; cellular response to mechanical stimulus [GO:0071260]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; positive regulation of neuron apoptotic process [GO:0043525]; protein processing [GO:0016485]	hit with GO BP
GN003960	Chromosome_1A	3365	2	99	38.63298662704309	0.7904008769182587	0.7579585649317837	99	0	0.6951596292481977	97	0	4.054054054054054	2	0	0.46425255338904364	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003961	Chromosome_1A	980	2	27	37.3469387755102	0.8016967126193001	1.2241054613935969	27	0	0.4032258064516129	16	0	1.9434628975265018	11	0	8.34382871536524	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003962	Chromosome_1A	261	1	12	50.191570881226056	0.7397260273972602	0.42016806722689076	12	0	0.42016806722689076	12	0	NA	NA	NA	0.518326545723806	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003963	Chromosome_1A	288	1	11	44.44444444444444	0.7734375	1.2552301255230125	11	0	1.2552301255230125	11	0	NA	NA	NA	1.1180532719500165	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003964	Chromosome_1A	756	1	24	41.402116402116405	0.7409948542024014	2.5641025641025643	24	0	2.5641025641025643	24	0	NA	NA	NA	1.4035087719298245	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003965	Chromosome_1A	1555	2	28	41.80064308681672	0.414473245818618	1.4097744360902256	28	0	1.1286681715575622	22	0	2.808988764044944	6	0	5.602988260405549	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003966	Chromosome_1A	3886	6	112	37.699433865156976	0.8123880062119221	0.6994199931763904	112	0	0.64	45	0	0.74360499702558	67	0	0.2222222222222222	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003183	Chromosome_1A	528	1	6	38.446969696969695	0.3075131042516016	5.882352941176471	1	0	5.882352941176471	1	0	NA	NA	NA	11.32903981264637	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003967	Chromosome_1A	546	1	4	37.362637362637365	0.21042489642547452	7.746478873239437	4	0	7.746478873239437	4	0	NA	NA	NA	5.507246376811594	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003968	Chromosome_1A	405	1	13	45.925925925925924	0.6352557915057915	0.5738880918220947	13	0	0.5738880918220947	13	0	NA	NA	NA	0.6076186024772143	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003692	Chromosome_1A	2598	5	68	39.607390300230946	0.6698973903942848	0.4789272030651341	68	0	0.5701254275940707	31	0	0.41288191577208916	37	0	0.439453125	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003969	Chromosome_1A	1125	2	14	37.15555555555556	0.3649888765294772	81.42695356738392	14	1	75.34562211981567	7	1	87.30512249443207	7	1	13.015184381778742	27	0.18518518518518517	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003970	Chromosome_1A	2466	5	42	36.69910786699108	0.5068710359408034	54.30076067875951	42	0.5476190476190477	41.33558748943364	26	0.3076923076923077	83.46007604562737	16	0.9375	1.0903426791277258	33	0	methylated (>=50%)	Q3ZBL5	Peptidyl-tRNA hydrolase 2, mitochondrial (PTH 2) (EC 3.1.1.29) (Bcl-2 inhibitor of transcription)	negative regulation of anoikis [GO:2000811]; positive regulation of anoikis [GO:2000210]	hit with GO BP
GN003688	Chromosome_1A	5803	4	175	39.272789936239874	0.7823285159620362	1.9557823129251701	147	0	0.228310502283105	24	0	2.258193445243805	123	0	0.9276437847866419	63	0	unmethylated (<10%)	Q9CXE7	Transmembrane emp24 domain-containing protein 5 (p24 family protein gamma-2) (p24gamma2)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi ribbon formation [GO:0090161]	hit with GO BP
GN003689	Chromosome_1A	29695	13	426	35.35612055901667	0.459779176371043	86.33441341356786	331	0.9274924471299094	61.834924965893585	46	0.6521739130434783	90.68499788020108	285	0.9719298245614035	1.3439635535307517	65	0	methylated (>=50%)	Q803E1	Nuclear cap-binding protein subunit 3	NA	hit, no GO BP
GN003972	Chromosome_1A	19688	19	233	32.954083705810646	0.43598920316301704	88.76155046201848	229	0.982532751091703	92.20846233230134	31	0.967741935483871	88.30798479087453	198	0.9848484848484849	39.7775876817793	63	0.47619047619047616	methylated (>=50%)	Q9D787	RING-type E3 ubiquitin-protein ligase PPIL2 (EC 2.3.2.27) (CYC4) (Probable inactive peptidyl-prolyl cis-trans isomerase-like 2) (PPIase)	protein folding [GO:0006457]; protein localization to plasma membrane [GO:0072659]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN003973	Chromosome_1A	22087	13	246	32.8835966858333	0.4120728956335184	86.01643166426113	245	0.9469387755102041	88.97203623473808	45	0.9333333333333333	85.53150242326333	200	0.95	43.9802913453299	63	0.5396825396825397	methylated (>=50%)	Q4KLN4	mRNA export factor GLE1 (GLE1 RNA export mediator) (GLE1-like protein) (Nucleoporin GLE1)	poly(A)+ mRNA export from nucleus [GO:0016973]	hit with GO BP
GN003974	Chromosome_1A	450	1	25	46.888888888888886	1.0107816711590296	1.6722408026755853	25	0	1.6722408026755853	25	0	NA	NA	NA	0.47877433769549954	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003975	Chromosome_1A	5799	3	109	34.14381789963787	0.6463818564645752	74.46950710108605	104	0.8269230769230769	37.2093023255814	6	0.3333333333333333	76.14807054304173	98	0.8571428571428571	0.378931413414172	51	0	methylated (>=50%)	P43024	Cytochrome c oxidase subunit 6A1, mitochondrial (Cytochrome c oxidase polypeptide VIa-liver)	mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	hit with GO BP
GN003976	Chromosome_1A	528	1	33	50.75757575757576	1.4305418719211822	1.0723860589812333	23	0	1.0723860589812333	23	0	NA	NA	NA	0.5099675475197033	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003977	Chromosome_1A	321	1	16	52.02492211838006	0.7595385980479148	0.9463722397476341	16	0	0.9463722397476341	16	0	NA	NA	NA	0.8008008008008008	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003978	Chromosome_1A	1797	1	48	37.39565943238731	0.7650063856960408	0.5660377358490566	48	0	0.5660377358490566	48	0	NA	NA	NA	4.597364568081991	57	0	unmethylated (<10%)	A0A8B8EY61	Cyclic GMP-AMP synthase-like receptor 2 (Cv-cGLR2) (EC 2.7.7.-)	NA	hit, no GO BP
GN003979	Chromosome_1A	663	1	21	38.914027149321264	0.8532818532818532	0.40858018386108275	21	0	0.40858018386108275	21	0	NA	NA	NA	0.8553971486761711	50	0	unmethylated (<10%)	Q30TG0	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [GO:0019288]; terpenoid biosynthetic process [GO:0016114]	hit with GO BP
GN003980	Chromosome_1A	16187	14	237	33.563971087910055	0.520500534431992	81.43175487465182	236	0.9576271186440678	88.23920265780731	26	1	80.80875646093037	210	0.9523809523809523	0.91478093403948	36	0	methylated (>=50%)	Q96LW2	Ribosomal protein S6 kinase-related protein (EC 2.7.11.1) (Sugen kinase 494)	NA	hit, no GO BP
GN003981	Chromosome_1A	9816	7	243	36.481255093724535	0.7446020527932472	1.6679904686258935	243	0	0.7926574885273259	47	0	1.8738349847934856	196	0	5.043227665706052	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003982	Chromosome_1A	330	1	9	39.09090909090909	0.7160077145612344	0.75642965204236	9	0	0.75642965204236	9	0	NA	NA	NA	0.36837631056956643	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003983	Chromosome_1A	693	1	19	43.14574314574315	0.6053793103448276	0.22701475595913734	19	0	0.22701475595913734	19	0	NA	NA	NA	0.39814200398142	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003984	Chromosome_1A	441	1	6	41.950113378684804	0.30969101123595505	1.0526315789473684	3	0	1.0526315789473684	3	0	NA	NA	NA	0.8216926869350862	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003985	Chromosome_1A	2437	6	60	37.13582273286828	0.7141880275085964	1.2763021731631596	60	0	1.288981288981289	51	0	1.214574898785425	9	0	10.946944257891202	35	0.08571428571428572	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003986	Chromosome_1A	53639	8	958	35.11810436436175	0.57933817749889	48.62461682129154	926	0.4956803455723542	55.414746543778804	19	0.5263157894736842	48.50282077245769	907	0.49503858875413453	15.368567454798331	42	0.11904761904761904	sparse (10-50%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN003667	Chromosome_1A	1612	2	56	39.578163771712155	0.8874121405750799	0.6493506493506493	56	0	0.6619385342789598	55	0	0	1	0	0.5272407732864675	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003987	Chromosome_1A	640	2	12	38.90625	0.4972804972804973	2.2916666666666665	12	0	2.785515320334262	9	0	0.8264462809917356	3	0	0.6809669731018045	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003988	Chromosome_1A	636	1	13	42.76729559748428	0.46535712275567065	0.3421309872922776	13	0	0.3421309872922776	13	0	NA	NA	NA	0.425531914893617	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003989	Chromosome_1A	12236	11	328	36.71134357633213	0.7956816700756763	0.713571190396799	328	0	0.6311207834602829	215	0	0.8440999138673557	113	0	1.1984021304926764	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003990	Chromosome_1A	1770	3	68	41.186440677966104	0.9065300896286812	0.7092198581560284	68	0	0.7422402159244265	51	0	0.631911532385466	17	0	0.748013090229079	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003991	Chromosome_1A	891	1	11	38.49607182940516	0.3356276967331005	41.359773371104815	11	0.36363636363636365	41.359773371104815	11	0.36363636363636365	NA	NA	NA	0.6624953993375046	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003992	Chromosome_1A	589	2	24	44.48217317487266	0.8244969378827647	0.5617977528089888	24	0	0.6389776357827476	22	0	0	2	0	0.804953560371517	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003665	Chromosome_1A	1352	1	6	26.109467455621303	0.5640383813099707	0.46296296296296297	6	0	0.46296296296296297	6	0	NA	NA	NA	1.4052583862194017	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003993	Chromosome_1A	957	1	4	27.481713688610242	0.447719298245614	0	4	0	0	4	0	NA	NA	NA	0.29411764705882354	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003994	Chromosome_1A	23282	19	686	35.447985568250154	0.9383456607544318	0.584749111023311	675	0	0.6544677440897556	189	0	0.5676225474112474	486	0	0.5282405526208859	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003652	Chromosome_1A	2550	1	57	37.05882352941177	0.652273420811718	0.7081038552321007	57	0	0.7081038552321007	57	0	NA	NA	NA	0.7816091954022989	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003996	Chromosome_1A	2391	1	69	38.22668339606859	0.7899590605472958	0.6761565836298933	69	0	0.6761565836298933	69	0	NA	NA	NA	0.32948929159802304	43	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN003654	Chromosome_1A	11219	5	185	34.75354309653267	0.5461119896435497	87.33643189131212	185	0.972972972972973	75.09505703422053	14	0.9285714285714286	87.81484508507319	171	0.9766081871345029	0.570287995437696	65	0	methylated (>=50%)	O88845	A-kinase anchor protein 10, mitochondrial (AKAP-10) (Dual specificity A kinase-anchoring protein 2) (D-AKAP-2) (Protein kinase A-anchoring protein 10) (PRKA10)	intracellular protein localization [GO:0008104]	hit with GO BP
GN003655	Chromosome_1A	1608	4	45	35.82089552238806	0.8729115145666204	0.6772009029345373	45	0	0.5809128630705395	27	0	0.7920792079207921	18	0	0.3073770491803279	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003998	Chromosome_1A	2172	4	42	35.58931860036832	0.6185097294731846	0.57636887608069165	42	0	0.5148005148005148	19	0	0.6130268199233716	23	0	0.37453183520599254	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003999	Chromosome_1A	1144	2	40	48.86363636363637	0.6063497111358457	0.29910269192422734	37	0	0.3973509933774834	33	0	0	4	0	0.5066141289051506	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004000	Chromosome_1A	1807	2	61	49.6956281128943	0.5865884030822939	0.47244094488188976	60	0	0.5061867266591676	58	0	0	2	0	0.4067584480600751	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003659	Chromosome_1A	973	3	12	40.90441932168551	0.30037044659394935	79.43037974683544	12	1	78.79518072289157	7	1	80.64516129032258	5	1	91.95742164399763	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003660	Chromosome_1A	174	1	2	48.275862068965516	0.1973908111174135	92.85714285714286	2	1	92.85714285714286	2	1	NA	NA	NA	86.4957264957265	10	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003650	Chromosome_1A	318	1	14	47.16981132075472	0.803030303030303	0	14	0	0	14	0	NA	NA	NA	0.5195843325339728	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003649	Chromosome_1A	618	1	27	43.36569579288026	0.9311383928571428	0.7611798287345385	27	0	0.7611798287345385	27	0	NA	NA	NA	0.2770083102493075	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003646	Chromosome_1A	12314	10	137	34.716582751339935	0.3699620348879029	77.23453017570665	137	0.8832116788321168	89.55637707948244	21	1	75.5847048632595	116	0.8620689655172413	74.08243929983061	25	0.96	methylated (>=50%)	Q8QZR1	Tyrosine aminotransferase (TAT) (EC 2.6.1.5) (L-tyrosine:2-oxoglutarate aminotransferase)	2-oxoglutarate metabolic process [GO:0006103]; amino acid metabolic process [GO:0006520]; cellular response to insulin stimulus [GO:0032869]; cellular response to retinoic acid [GO:0071300]; glutamate metabolic process [GO:0006536]; L-phenylalanine catabolic process [GO:0006559]; L-tyrosine catabolic process [GO:0006572]; liver regeneration [GO:0097421]; response to cAMP [GO:0051591]; response to cortisol [GO:0051414]; response to dexamethasone [GO:0071548]; response to ethanol [GO:0045471]; response to glucocorticoid [GO:0051384]; response to mercury ion [GO:0046689]; response to oxidative stress [GO:0006979]	hit with GO BP
GN004001	Chromosome_1A	1164	1	41	43.81443298969072	0.7340346991509782	58.22928490351873	41	0.5365853658536586	58.22928490351873	41	0.5365853658536586	NA	NA	NA	5.420326223337516	62	0	methylated (>=50%)	Q9JLY0	Suppressor of cytokine signaling 6 (SOCS-6) (Cytokine-inducible SH2 protein 4) (CIS-4) (Suppressor of cytokine signaling 4) (SOCS-4)	intracellular signal transduction [GO:0035556]; negative regulation of T cell activation [GO:0050868]; proteasomal protein catabolic process [GO:0010498]; protein ubiquitination [GO:0016567]; regulation of growth [GO:0040008]	hit with GO BP
GN003630	Chromosome_1A	15047	8	216	35.64830198710706	0.4522958087777187	79.44155671064907	216	0.8657407407407407	68.46011131725417	19	0.8421052631578947	80.29149913842619	197	0.868020304568528	49.39172749391727	20	0.55	methylated (>=50%)	Q5PQN9	Large ribosomal subunit protein mL38 (39S ribosomal protein L38, mitochondrial) (L38mt) (MRP-L38)	NA	hit, no GO BP
GN003631	Chromosome_1A	375	1	7	40	0.4751131221719457	73.16636851520572	7	0.8571428571428571	73.16636851520572	7	0.8571428571428571	NA	NA	NA	0.7919366450683946	65	0	methylated (>=50%)	P53568	CCAAT/enhancer-binding protein gamma (C/EBP gamma) (Granulocyte colony-stimulating factor promoter element 1-binding protein) (GPE1-BP) (GPE1-binding protein) (Immunoglobulin enhancer-binding protein 1) (IG/EBP-1)	B cell differentiation [GO:0030183]; chromatin remodeling [GO:0006338]; DNA-templated transcription [GO:0006351]; enucleate erythrocyte differentiation [GO:0043353]; immune response [GO:0006955]; liver development [GO:0001889]; mRNA metabolic process [GO:0016071]; natural killer cell mediated cytotoxicity [GO:0042267]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nucleosome disassembly [GO:0006337]; positive regulation of DNA repair [GO:0045739]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of type II interferon production [GO:0032729]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004003	Chromosome_1A	948	1	49	45.46413502109704	1.0003014772384684	1.1396011396011396	46	0	1.1396011396011396	46	0	NA	NA	NA	23.44944774851317	32	0.28125	unmethylated (<10%)	Q00322	CCAAT/enhancer-binding protein delta (C/EBP delta) (C/EBP-related protein 3)	DNA-templated transcription [GO:0006351]; fat cell differentiation [GO:0045444]; hematopoietic progenitor cell differentiation [GO:0002244]; inner ear development [GO:0048839]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell differentiation [GO:0045595]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004004	Chromosome_1A	771	1	32	46.17380025940337	0.7795753286147624	0.22371364653243847	31	0	0.22371364653243847	31	0	NA	NA	NA	1.0909090909090908	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004005	Chromosome_1A	1041	1	47	44.47646493756004	0.9216554270429115	0.8387096774193549	47	0	0.8387096774193549	47	0	NA	NA	NA	0.5599472990777339	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003635	Chromosome_1A	4355	5	33	35.33869115958668	0.24273804255664141	84.12863070539419	33	0.9393939393939394	93.39045287637698	15	1	77.31773177317731	18	0.8888888888888888	83.35005015045135	37	1	methylated (>=50%)	I6V1W0	Protein brambleberry	karyomere membrane fusion [GO:0061472]; pronuclear fusion [GO:0007344]	hit with GO BP
GN003636	Chromosome_1A	300	1	5	49	0.2777777777777778	94.82758620689656	5	1	94.82758620689656	5	1	NA	NA	NA	91.57566302652106	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003637	Chromosome_1A	892	2	12	46.300448430493276	0.25244092259799067	89.77777777777777	12	1	91.75257731958763	10	1	77.41935483870968	2	1	87.98955613577023	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003638	Chromosome_1A	9326	9	106	34.94531417542355	0.37392698302463884	80.9106830122592	102	0.9215686274509803	65.86741889985896	22	0.7727272727272727	85.29714168208925	80	0.9625	15.191986644407345	47	0.14893617021276595	methylated (>=50%)	Q803K4	N-lysine methyltransferase setd6 (EC 2.1.1.-) (SET domain-containing protein 6)	peptidyl-lysine monomethylation [GO:0018026]; regulation of inflammatory response [GO:0050727]	hit with GO BP
GN003639	Chromosome_1A	15780	10	162	33.155893536121674	0.37364441427646844	71.2502294841197	162	0.8209876543209876	72.19730941704036	32	0.75	71.06476399560923	130	0.8384615384615385	20	39	0.28205128205128205	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003640	Chromosome_1A	1725	3	47	38.72463768115942	0.7267910929432013	0.45151580305310685	45	0	0.4416961130742049	22	0	0.4608294930875576	23	0	0.41341295360587965	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003681	Chromosome_1A	3359	4	90	35.24858588865734	0.862660833982519	0.6184066933430338	90	0	0.44052863436123346	37	0	0.7434944237918215	53	0	0.7255655142979086	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003680	Chromosome_1A	1585	4	48	34.95268138801262	0.9915933528836754	0.5251312828207052	48	0	0.5242463958060288	27	0	0.5263157894736842	21	0	0.487256371814093	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004006	Chromosome_1A	351	1	13	41.31054131054131	0.8684811572135516	3.9647577092511015	13	0	3.9647577092511015	13	0	NA	NA	NA	1.2804097311139564	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004007	Chromosome_1A	315	1	10	40	0.8141638666322047	0.5813953488372093	10	0	0.5813953488372093	10	0	NA	NA	NA	1.0875787063537492	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004008	Chromosome_1A	1783	2	25	36.287156477846324	0.4264734022196709	85.26119402985074	25	0.92	85.34482758620689	11	0.9090909090909091	85.22099447513813	14	0.9285714285714286	70.95416276894294	41	0.8292682926829268	methylated (>=50%)	Q7YRA3	Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41)	DNA deamination [GO:0045006]; histone mRNA catabolic process [GO:0071044]; maturation of 5.8S rRNA [GO:0000460]; nuclear mRNA surveillance [GO:0071028]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; positive regulation of cell growth [GO:0030307]; rRNA catabolic process [GO:0016075]; U4 snRNA 3'-end processing [GO:0034475]	hit with GO BP
GN004009	Chromosome_1A	14337	19	209	36.004742972727904	0.45145870450376474	83.23800290838585	192	0.921875	88.60759493670886	39	0.9487179487179487	82.08990350670746	153	0.9150326797385621	56.229685807150595	56	0.44642857142857145	methylated (>=50%)	O35643	AP-1 complex subunit beta-1 (Adaptor protein complex AP-1 subunit beta-1) (Adaptor-related protein complex 1 subunit beta-1) (Beta-1-adaptin) (Beta-adaptin 1) (Clathrin assembly protein complex 1 beta large chain) (Golgi adaptor HA1/AP1 adaptin beta subunit)	basolateral protein secretion [GO:0110010]; clathrin coat assembly [GO:0048268]; determination of left/right symmetry [GO:0007368]; heart development [GO:0007507]; intracellular protein transport [GO:0006886]; kidney development [GO:0001822]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; receptor-mediated endocytosis [GO:0006898]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN004010	Chromosome_1A	7066	9	93	34.44664590999151	0.4444061221839901	60.369609856262834	86	0.5348837209302325	44.6031746031746	14	0.35714285714285715	62.111910191194525	72	0.5694444444444444	87.96680497925311	14	0.8571428571428571	methylated (>=50%)	O00623	Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome assembly factor 3) (PAF-3)	cellular response to reactive oxygen species [GO:0034614]; peroxisome organization [GO:0007031]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein import into peroxisome matrix [GO:0016558]; protein import into peroxisome matrix, receptor recycling [GO:0016562]; protein import into peroxisome matrix, substrate release [GO:0044721]; protein polyubiquitination [GO:0000209]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; protein targeting to peroxisome [GO:0006625]	hit with GO BP
GN004011	Chromosome_1A	506	2	3	39.723320158102766	0.1530550514216576	82.5	3	1	82.5	3	1	NA	NA	NA	81.06557377049181	21	0.9047619047619048	NA	P63009	AP-2 complex subunit beta (AP105B) (Adaptor protein complex AP-2 subunit beta) (Adaptor-related protein complex 2 subunit beta) (Beta-2-adaptin) (Beta-adaptin) (Clathrin assembly protein complex 2 beta large chain) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit)	intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN004012	Chromosome_1A	4765	6	63	35.57187827911857	0.41795335885833623	73.83573243014395	63	0.8412698412698413	86.74242424242425	16	0.9375	70.11995637949836	47	0.8085106382978723	81.03197674418605	28	0.9642857142857143	methylated (>=50%)	O35643	AP-1 complex subunit beta-1 (Adaptor protein complex AP-1 subunit beta-1) (Adaptor-related protein complex 1 subunit beta-1) (Beta-1-adaptin) (Beta-adaptin 1) (Clathrin assembly protein complex 1 beta large chain) (Golgi adaptor HA1/AP1 adaptin beta subunit)	basolateral protein secretion [GO:0110010]; clathrin coat assembly [GO:0048268]; determination of left/right symmetry [GO:0007368]; heart development [GO:0007507]; intracellular protein transport [GO:0006886]; kidney development [GO:0001822]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; receptor-mediated endocytosis [GO:0006898]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN004013	Chromosome_1A	1679	5	11	37.52233472304943	0.18667623514190992	76.6798418972332	11	1	77.09923664122137	9	1	75.22123893805309	2	1	81.23359580052494	19	0.8947368421052632	methylated (>=50%)	O35643	AP-1 complex subunit beta-1 (Adaptor protein complex AP-1 subunit beta-1) (Adaptor-related protein complex 1 subunit beta-1) (Beta-1-adaptin) (Beta-adaptin 1) (Clathrin assembly protein complex 1 beta large chain) (Golgi adaptor HA1/AP1 adaptin beta subunit)	basolateral protein secretion [GO:0110010]; clathrin coat assembly [GO:0048268]; determination of left/right symmetry [GO:0007368]; heart development [GO:0007507]; intracellular protein transport [GO:0006886]; kidney development [GO:0001822]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; receptor-mediated endocytosis [GO:0006898]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN004014	Chromosome_1A	2718	1	29	40.507726269315675	0.2604928153132312	62.44302643573382	29	0.6896551724137931	62.44302643573382	29	0.6896551724137931	NA	NA	NA	72.62109240810717	39	0.7948717948717948	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004015	Chromosome_1A	5821	13	58	34.97680810857241	0.32654075787075054	67.79951939581188	58	0.6551724137931034	63.22049405306496	31	0.6129032258064516	70.54945054945055	27	0.7037037037037037	47.360703812316714	16	0.25	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004016	Chromosome_1A	1211	4	12	37.9851362510322	0.2757285974499089	34.66981132075472	6	0	35.497835497835496	3	0	33.67875647668394	3	0	24.244505494505493	23	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004017	Chromosome_1A	1476	1	20	37.87262872628726	0.37972729611525596	24.297646165527716	20	0	24.297646165527716	20	0	NA	NA	NA	0.8385093167701864	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004018	Chromosome_1A	1188	3	31	37.37373737373738	0.754007739082366	0	5	0	0	4	0	0	1	0	0.8023774145616642	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003617	Chromosome_1A	652	2	16	37.26993865030675	0.7072542372881356	1.7543859649122806	11	0	1.7543859649122806	11	0	NA	NA	NA	0.5263157894736842	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003619	Chromosome_1A	2594	4	75	35.003855050115654	0.9463146988866028	0.6002000666888962	74	0	0.6356968215158925	28	0	0.5818365798128005	46	0	0.450524246395806	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004020	Chromosome_1A	2985	4	84	34.472361809045225	0.9505648646599439	0.482167457523343	77	0	0.5672009864364982	26	0	0.4439018976806126	51	0	0.57018279389569	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004021	Chromosome_1A	1697	4	43	35.710076605774894	0.8043540564373898	0.5614657210401891	43	0	0.7566204287515763	28	0	0.389321468298109	15	0	0.47499301480860573	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003590	Chromosome_1A	297	1	2	53.535353535353536	0.20496894409937888	4	1	0	4	1	0	NA	NA	NA	0.3574910627234319	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004023	Chromosome_1A	621	1	4	51.207729468599034	0.21871973232367703	0	4	0	0	4	0	NA	NA	NA	0.6106870229007634	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003564	Chromosome_1A	296	1	2	53.37837837837838	0.22415751609238924	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7272727272727273	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003592	Chromosome_1A	210	1	1	49.04761904761905	0.2075098814229249	0	1	0	0	1	0	NA	NA	NA	0.43478260869565216	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004024	Chromosome_1A	291	1	3	52.92096219931271	0.34035087719298246	3.225806451612903	2	0	3.225806451612903	2	0	NA	NA	NA	0.6024096385542169	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003569	Chromosome_1A	435	1	4	51.03448275862069	0.28618421052631576	0	4	0	0	4	0	NA	NA	NA	1.3513513513513513	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003562	Chromosome_1A	210	1	1	49.523809523809526	0.20527859237536658	0	1	0	0	1	0	NA	NA	NA	5.726872246696035	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003570	Chromosome_1A	291	1	3	52.577319587628864	0.3281954887218045	0	1	0	0	1	0	NA	NA	NA	5.348837209302325	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004026	Chromosome_1A	324	1	3	51.23456790123457	0.2955305564001216	0	3	0	0	3	0	NA	NA	NA	0.423728813559322	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004027	Chromosome_1A	210	1	1	50	0.20309477756286268	4.545454545454546	1	0	4.545454545454546	1	0	NA	NA	NA	1.7857142857142858	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003566	Chromosome_1A	543	1	3	50.828729281767956	0.2031425364758698	8.695652173913043	2	0	8.695652173913043	2	0	NA	NA	NA	0.823045267489712	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003565	Chromosome_1A	325	1	2	50.76923076923077	0.22413793103448276	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6928406466512702	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003594	Chromosome_1A	325	1	2	51.07692307692308	0.23272466881489437	0	2	0	0	2	0	NA	NA	NA	1.7391304347826086	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004029	Chromosome_1A	333	1	1	51.651651651651655	0.13341346153846154	0	1	0	0	1	0	NA	NA	NA	0.9823182711198428	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004030	Chromosome_1A	2227	2	72	42.11944319712618	0.7307229574537898	0.4731182795698925	72	0	0.4824561403508772	71	0	0	1	0	0.9798432250839866	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004031	Chromosome_1A	1473	1	52	43.17718940936864	0.7575137219997033	0.46875	52	0	0.46875	52	0	NA	NA	NA	0.9439899307740718	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004032	Chromosome_1A	480	1	14	41.041666666666664	0.6934984520123839	1.3392857142857142	14	0	1.3392857142857142	14	0	NA	NA	NA	0.4484304932735426	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004033	Chromosome_1A	2435	3	59	34.620123203285424	0.8120979503239009	1.5773809523809523	58	0	2.08955223880597	17	0	1.449814126394052	41	0	0.5255255255255256	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003554	Chromosome_1A	6259	4	174	35.77248761783032	0.8689934171154997	0.6082567620033649	173	0	0.2843601895734597	24	0	0.6594724220623501	149	0	0.6781750924784217	63	0	unmethylated (<10%)	Q2HJ57	Coactosin-like protein	regulation of actin filament polymerization [GO:0030833]	hit with GO BP
GN004034	Chromosome_1A	525	1	19	47.42857142857143	0.9472934472934473	0.8797653958944281	19	0	0.8797653958944281	19	0	NA	NA	NA	1.094391244870041	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004035	Chromosome_1A	6974	5	212	37.7545167765988	0.8532403196690659	6.386410063434039	209	0	4.084967320261438	38	0	6.95244474212994	171	0	8.681562340098925	57	0	unmethylated (<10%)	P24507	Synaptotagmin-C (Synaptic vesicle protein O-p65-C)	calcium-ion regulated exocytosis [GO:0017156]	hit with GO BP
GN004036	Chromosome_1A	153	1	4	54.248366013071895	0.3673469387755102	0.8264462809917356	4	0	0.8264462809917356	4	0	NA	NA	NA	0.1813236627379873	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004037	Chromosome_1A	405	1	10	54.5679012345679	0.3367143332224809	0	5	0	0	5	0	NA	NA	NA	0.30066145520144316	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004038	Chromosome_1A	590	2	16	54.40677966101695	0.36834712033713124	0	6	0	0	6	0	NA	NA	NA	0.3640776699029126	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004039	Chromosome_1A	1620	1	64	40.67901234567901	0.954959933683338	0.6226053639846744	64	0	0.6226053639846744	64	0	NA	NA	NA	0.759974667511083	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004040	Chromosome_1A	189	1	7	46.03174603174603	0.6992600422832981	0	7	0	0	7	0	NA	NA	NA	0.4882379050155348	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004041	Chromosome_1A	903	1	25	42.74640088593577	0.6113744075829384	5.06155950752394	25	0	5.06155950752394	25	0	NA	NA	NA	0.591715976331361	41	0	unmethylated (<10%)	Q02225	Ski oncogene (Proto-oncogene c-Ski)	negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]	hit with GO BP
GN011870	Chromosome_1A	654	1	3	39.75535168195719	0.11745689655172414	0.7884362680683311	3	0	0.7884362680683311	3	0	NA	NA	NA	0.6983704689058863	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002464	Chromosome_1A	334	1	14	43.41317365269461	0.912568306010929	0.6433823529411765	12	0	0.6433823529411765	12	0	NA	NA	NA	2.0535158680771626	20	0	unmethylated (<10%)	P71359	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN004042	Chromosome_1A	300	1	17	45	1.1243386243386244	0.4489337822671156	17	0	0.4489337822671156	17	0	NA	NA	NA	0.8194138039710054	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004043	Chromosome_1A	28782	13	608	33.79195330414843	0.7404942965779467	0.9230848567671402	592	0	0.9958633369082274	91	0	0.9083581349206349	501	0	0.5206638464041653	47	0	unmethylated (<10%)	O60242	Adhesion G protein-coupled receptor B3 (Brain-specific angiogenesis inhibitor 3)	cell surface receptor signaling pathway [GO:0007166]; G protein-coupled receptor signaling pathway [GO:0007186]; myoblast fusion [GO:0007520]; negative regulation of angiogenesis [GO:0016525]; neuron remodeling [GO:0016322]; regulation of dendrite morphogenesis [GO:0048814]; regulation of synapse maturation [GO:0090128]; regulation of synapse pruning [GO:1905806]	hit with GO BP
GN004044	Chromosome_1A	4847	3	167	38.559933979781306	0.9283907033504457	3.576341127922971	167	0	0.5906040268456376	82	0	6.7136812411847675	85	0	0.761307657859382	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004045	Chromosome_1A	5867	7	31	31.787966592807226	0.21423405468311965	88.13247470101196	31	1	88.29981718464352	10	1	88.0762138905962	21	1	0.5112474437627812	43	0	methylated (>=50%)	Q9GP32	Fructose-bisphosphate aldolase (EC 4.1.2.13)	glycolytic process [GO:0006096]	hit with GO BP
GN004046	Chromosome_1A	702	2	25	40.74074074074074	0.8643191332184191	0.2028397565922921	25	0	0.22148394241417496	22	0	0	3	0	0.6535947712418301	30	0	unmethylated (<10%)	Q99L20	Glutathione S-transferase theta-3 (EC 2.5.1.18)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN004047	Chromosome_1A	763	2	12	41.93971166448231	0.3576702214930271	92.03747072599532	12	1	93.63057324840764	10	1	87.61061946902655	2	1	77.77777777777777	8	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004048	Chromosome_1A	3425	4	51	36.32116788321168	0.45366005687794614	94.47900466562986	51	1	94.76190476190476	11	1	94.42379182156134	40	1	83.48936170212765	24	0.9583333333333334	methylated (>=50%)	A2BGR3	DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)	intein-mediated protein splicing [GO:0016539]	hit with GO BP
GN004049	Chromosome_1A	210	1	6	48.095238095238095	0.5384615384615384	93.8388625592417	6	1	93.8388625592417	6	1	NA	NA	NA	92.93800539083558	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004050	Chromosome_1A	3766	2	72	34.891131173659055	0.6289478567452218	94.52006363797065	70	1	95.05494505494505	13	1	94.46292310702407	57	1	86.08981380065717	23	1	methylated (>=50%)	Q8VCM5	Mitochondrial ubiquitin ligase activator of NFKB 1 (EC 2.3.2.27) (E3 ubiquitin-protein ligase MUL1) (Growth inhibition and death E3 ligase) (Protein Hades) (RING-type E3 ubiquitin transferase NFKB 1)	cellular response to exogenous dsRNA [GO:0071360]; mitochondrial fission [GO:0000266]; mitochondrion localization [GO:0051646]; negative regulation of chemokine (C-C motif) ligand 5 production [GO:0071650]; negative regulation of defense response to virus by host [GO:0050689]; negative regulation of innate immune response [GO:0045824]; negative regulation of mitochondrial fusion [GO:0010637]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cGAS/STING signaling pathway [GO:0141111]; positive regulation of dendrite extension [GO:1903861]; positive regulation of mitochondrial fission [GO:0090141]; positive regulation of protein sumoylation [GO:0033235]; positive regulation of type 2 mitophagy [GO:1905091]; protein destabilization [GO:0031648]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]; protein stabilization [GO:0050821]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901028]; regulation of mitochondrion organization [GO:0010821]; regulation of protein stability [GO:0031647]	hit with GO BP
GN004051	Chromosome_1A	2063	3	27	44.20746485700436	0.26787569252077564	NA	0	NA	NA	NA	NA	NA	NA	NA	3.551745254133497	34	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004052	Chromosome_1A	12278	5	178	33.94689688874409	0.5033247775555348	4.067758832051711	178	0	1.8807339449541285	43	0	4.769615780950979	135	0	0.9640102827763496	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004053	Chromosome_1A	459	1	15	45.53376906318083	0.6428571428571429	0.33112582781456956	15	0	0.33112582781456956	15	0	NA	NA	NA	0.3189792663476874	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004054	Chromosome_1A	507	1	10	48.12623274161736	0.3595744680851064	0.4878048780487805	10	0	0.4878048780487805	10	0	NA	NA	NA	0.3234750462107209	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004055	Chromosome_1A	486	1	13	46.09053497942387	0.5116618075801749	0.5076142131979695	10	0	0.5076142131979695	10	0	NA	NA	NA	0.32228360957642727	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004056	Chromosome_1A	8383	5	146	32.63748061553143	0.6546808537952638	7.8921161825726145	144	0	4.9695740365111565	37	0	8.463980948600913	107	0	0.6077348066298343	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004057	Chromosome_1A	1036	2	24	42.76061776061776	0.5159362549800797	0.5688282138794084	24	0	0.5541871921182266	22	0	0.746268656716418	2	0	0.3411910669975186	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004058	Chromosome_1A	333	1	9	45.34534534534534	0.5296924708377518	0.6060606060606061	9	0	0.6060606060606061	9	0	NA	NA	NA	0.16652789342214822	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004059	Chromosome_1A	1482	1	51	45.07422402159244	0.6794987054085155	0	46	0	0	46	0	NA	NA	NA	2.577590741714887	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004060	Chromosome_1A	1520	2	27	44.276315789473685	0.3805990911620143	0	22	0	0	19	0	0	3	0	0.4426410918480266	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004061	Chromosome_1A	480	1	12	45.416666666666664	0.4897959183673469	0	10	0	0	10	0	NA	NA	NA	0.4311893639956881	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004062	Chromosome_1A	1716	2	34	37.004662004662	0.6028892057784115	91.35011441647598	34	1	92.21435793731041	32	1	83.09178743961353	2	1	89.7484575225439	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004063	Chromosome_1A	9499	5	129	34.4141488577745	0.4589631397507293	88.38282266650893	128	0.9765625	76.5281173594132	9	0.7777777777777778	88.98557931377424	119	0.9915966386554622	88.62559241706161	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004064	Chromosome_1A	10559	7	279	37.86343403731414	0.737258473329209	1.8692358366271409	264	0.007575757575757576	2.6897938662644547	118	0	1.4695077149155034	146	0.0136986301369863	0.6993006993006993	58	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN004065	Chromosome_1A	8702	7	247	37.39370259710412	0.8126213368327491	0.8959402706486235	246	0	1.0937927262783702	102	0	0.793425899688297	144	0	0.682261208576998	63	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN004066	Chromosome_1A	5556	5	158	33.621310295176386	1.0071372272772643	1.5050526768436896	158	0	1.1541072640868975	51	0	1.6677155443675267	107	0	0.6390850992263707	62	0	unmethylated (<10%)	B2GV54	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Acetylalkylglycerol acetylhydrolase) (2-acetyl MAGE hydrolase) (EC 3.1.1.71) (Arylacetamide deacetylase-like 1)	ether lipid metabolic process [GO:0046485]; protein dephosphorylation [GO:0006470]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN004067	Chromosome_1A	6751	7	59	32.49888905347356	0.3385504452564485	95.35634467345419	59	1	93.53233830845771	14	1	95.81135587961526	45	1	95.01706484641639	37	1	methylated (>=50%)	Q4RJN5	Lissencephaly-1 homolog	brain morphogenesis [GO:0048854]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]; reelin-mediated signaling pathway [GO:0038026]	hit with GO BP
GN004068	Chromosome_1A	10338	8	155	35.05513639001741	0.4910945647959864	79.41115702479338	154	0.8246753246753247	90.30183077684315	40	0.95	76.53740697218959	114	0.7807017543859649	87.29628081905558	38	0.9210526315789473	methylated (>=50%)	Q6DC64	RNA N(6)-adenosine-methyltransferase mettl16 (EC 2.1.1.348) (Methyltransferase 10 domain-containing protein) (Methyltransferase-like protein 16) (U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase) (EC 2.1.1.346)	mRNA catabolic process [GO:0006402]; mRNA destabilization [GO:0061157]; mRNA processing [GO:0006397]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of mRNA splicing, via spliceosome [GO:0048024]; rRNA base methylation [GO:0070475]; S-adenosylmethionine biosynthetic process [GO:0006556]; snRNA (adenine-N6)-methylation [GO:0120049]	hit with GO BP
GN004069	Chromosome_1A	348	1	5	40.804597701149426	0.34544371649791544	87.3913043478261	5	1	87.3913043478261	5	1	NA	NA	NA	81.9543973941368	21	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004070	Chromosome_1A	324	2	4	35.80246913580247	0.3862891207153502	93.15068493150685	4	1	93.15068493150685	4	1	NA	NA	NA	79.64071856287426	8	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004071	Chromosome_1A	1786	4	44	38.07390817469205	0.6954397826529438	24.72978815391267	43	0.18604651162790697	43.663594470046085	21	0.3333333333333333	13.356401384083044	22	0.045454545454545456	70.75351213282248	12	0.75	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004072	Chromosome_1A	7206	6	66	36.15043019705801	0.2863356079023513	84.63407227452171	66	0.9545454545454546	81.30311614730878	9	0.8888888888888888	85.03401360544218	57	0.9649122807017544	87.14652956298201	17	1	methylated (>=50%)	Q6DRD9	sn-1-specific diacylglycerol lipase ABHD11 (EC 3.1.1.116) (Alpha/beta hydrolase domain-containing protein 11) (Abhydrolase domain-containing protein 11) (Williams-Beuren syndrome chromosomal region 21 protein homolog)	lipid metabolic process [GO:0006629]	hit with GO BP
GN004073	Chromosome_1A	6796	5	108	34.549735138316656	0.5346503496503496	92.3825958338469	107	0.9719626168224299	91.32420091324201	10	1	92.47585836909872	97	0.9690721649484536	78.22890025575448	35	0.9142857142857143	methylated (>=50%)	Q15286	Ras-related protein Rab-35 (EC 3.6.5.2) (GTP-binding protein RAY) (Ras-related protein Rab-1C)	antigen processing and presentation [GO:0019882]; cellular response to nerve growth factor stimulus [GO:1990090]; endocytic recycling [GO:0032456]; endosomal transport [GO:0016197]; intracellular protein localization [GO:0008104]; mitotic cytokinesis [GO:0000281]; neuron projection development [GO:0031175]; plasma membrane to endosome transport [GO:0048227]; protein localization to endosome [GO:0036010]; Rab protein signal transduction [GO:0032482]	hit with GO BP
GN004074	Chromosome_1A	1521	2	53	41.157133464825776	0.8258851733464471	1.1482254697286012	53	0	1.5604681404421326	31	0	0.8718395815170009	22	0	4.076350695567777	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004075	Chromosome_1A	25063	11	202	42.14978254797909	0.23089648874224064	71.03027662818558	151	0.8675496688741722	74.00405131667792	29	0.8620689655172413	70.45838202830801	122	0.8688524590163934	0.7521367521367521	59	0	methylated (>=50%)	P0CF95	BICD family-like cargo adapter 1 (Bicaudal D-related protein 1) (BICD-related protein 1) (BICDR-1) (Coiled-coil domain-containing protein 64A)	brain development [GO:0007420]; embryonic camera-type eye development [GO:0031076]; eye development [GO:0001654]; Golgi to secretory granule transport [GO:0055107]; negative regulation of neuron projection development [GO:0010977]; neuron projection development [GO:0031175]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN004076	Chromosome_1A	1281	1	16	40.20296643247463	0.3138071470128916	96.00456621004567	16	1	96.00456621004567	16	1	NA	NA	NA	78.73376623376623	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004077	Chromosome_1A	2503	4	23	35.31761885737115	0.2956213187907918	78.94736842105263	23	0.8695652173913043	88.42281879194631	11	1	70.6056129985229	12	0.75	95.21640091116173	28	1	methylated (>=50%)	A5D8V6	Vacuolar protein sorting-associated protein 37C (hVps37C) (ESCRT-I complex subunit VPS37C)	macroautophagy [GO:0016236]; membrane fission [GO:0090148]; multivesicular body assembly [GO:0036258]; protein targeting to membrane [GO:0006612]; protein targeting to vacuole [GO:0006623]; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN004078	Chromosome_1A	285	1	16	44.21052631578947	1.34394341290893	96.61654135338345	16	1	96.61654135338345	16	1	NA	NA	NA	94.24460431654676	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004079	Chromosome_1A	2055	5	25	33.38199513381995	0.4390125102543068	93.4402332361516	25	1	92.27642276422765	6	1	93.8058748403576	19	1	95.33255542590432	26	1	methylated (>=50%)	F1RFX9	Mitochondrial 2-oxoglutarate/malate carrier protein (Alpha-oxoglutarate carrier) (OGCP) (Solute carrier family 25 member 11) (SLC25A11)	NA	hit, no GO BP
GN004080	Chromosome_1A	7891	7	264	37.840577873526804	0.9353199074209183	0.605831124574025	264	0	0.657379871654406	187	0	0.5269461077844312	77	0	0.5524861878453039	58	0	unmethylated (<10%)	Q9ULI1	NACHT and WD repeat domain-containing protein 2 (Leucine-rich repeat and WD repeat-containing protein KIAA1239)	NA	hit, no GO BP
GN004081	Chromosome_1A	6170	3	150	36.38573743922204	0.7358939740182912	26.42753527627588	149	0.174496644295302	85.92057761732852	13	0.8461538461538461	19.105450236966824	136	0.11029411764705882	0.497737556561086	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004082	Chromosome_1A	4978	7	62	34.35114503816794	0.42261767831126007	93.7102633969119	62	1	94.34571890145396	11	1	93.60634081902246	51	1	88.46588767433094	48	0.9791666666666666	methylated (>=50%)	P40926	Malate dehydrogenase, mitochondrial (EC 1.1.1.37)	aerobic respiration [GO:0009060]; gluconeogenesis [GO:0006094]; malate metabolic process [GO:0006108]; malate-aspartate shuttle [GO:0043490]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN004083	Chromosome_1A	7709	6	101	35.51692826566351	0.4159342760925494	75.59712710873559	101	0.8217821782178217	75.62254259501965	11	0.9090909090909091	75.59341500765697	90	0.8111111111111111	74.75409836065573	29	0.9310344827586207	methylated (>=50%)	Q9Y6J8	Serine/threonine/tyrosine-interacting-like protein 1 (Dual specificity phosphatase inhibitor MK-STYX) (Dual specificity protein phosphatase 24) (Inactive dual specificity protein phosphatase MK-STYX) (Map kinase phosphatase-like protein MK-STYX)	intracellular signal transduction [GO:0035556]; negative regulation of stress granule assembly [GO:0062030]; positive regulation of intrinsic apoptotic signaling pathway [GO:2001244]; positive regulation of neuron projection development [GO:0010976]; regulation of intrinsic apoptotic signaling pathway [GO:2001242]	hit with GO BP
GN004084	Chromosome_1A	9979	12	114	34.86321274676821	0.3788347828171892	78.67511216679863	113	0.8584070796460177	72.70421106037544	32	0.75	80.77403245942571	81	0.9012345679012346	0.7159904534606205	57	0	methylated (>=50%)	Q9Y4P3	Transducin beta-like protein 2 (WS beta-transducin repeats protein) (WS-betaTRP) (Williams-Beuren syndrome chromosomal region 13 protein)	cellular response to glucose starvation [GO:0042149]; cellular response to hypoxia [GO:0071456]; endoplasmic reticulum unfolded protein response [GO:0030968]	hit with GO BP
GN004085	Chromosome_1A	4545	11	50	35.70957095709571	0.3455422390224766	92.1523178807947	50	1	92.66503667481662	16	1	91.96185286103542	34	1	71.86009538950715	14	0.8571428571428571	methylated (>=50%)	Q8VIP2	Carbohydrate-responsive element-binding protein (ChREBP) (Class D basic helix-loop-helix protein 14) (bHLHd14) (MLX interactor) (MLX-interacting protein-like) (WS basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Williams-Beuren syndrome chromosomal region 14 protein)	cellular response to glucose stimulus [GO:0071333]; energy homeostasis [GO:0097009]; fatty acid homeostasis [GO:0055089]; glucose homeostasis [GO:0042593]; glucose mediated signaling pathway [GO:0010255]; lipid biosynthetic process [GO:0008610]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of oxidative phosphorylation [GO:0090324]; negative regulation of signal transduction by p53 class mediator [GO:1901797]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of fatty acid biosynthetic process [GO:0045723]; positive regulation of glycolytic process [GO:0045821]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription from RNA polymerase II promoter by glucose [GO:0000432]; regulation of glycolytic process [GO:0006110]; regulation of transcription by RNA polymerase II [GO:0006357]; response to glucose [GO:0009749]; response to nutrient [GO:0007584]; response to nutrient levels [GO:0031667]; response to vitamin B3 [GO:0033552]	hit with GO BP
GN003539	Chromosome_1A	20474	10	253	35.21539513529354	0.39884858840508136	87.9209532973133	251	0.896414342629482	69.64630225080386	38	0.5	90.29775844764136	213	0.9671361502347418	0.8285004142502072	52	0	methylated (>=50%)	Q2VPU4	MLX-interacting protein (Transcriptional activator MondoA)	nucleocytoplasmic transport [GO:0006913]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN003538	Chromosome_1A	16889	19	177	35.034637930013616	0.34310995140098355	72.8140314676296	173	0.838150289017341	77.67527675276753	58	0.8448275862068966	70.92731829573935	115	0.8347826086956521	70.63508270369614	51	0.7058823529411765	methylated (>=50%)	O75976	Carboxypeptidase D (EC 3.4.17.22) (Metallocarboxypeptidase D) (gp180)	peptide metabolic process [GO:0006518]; protein processing [GO:0016485]	hit with GO BP
GN004087	Chromosome_1A	7149	8	71	36.43866275003497	0.30105516014234873	93.26869806094183	71	1	95.17439082656475	49	1	90.6394199077126	22	1	80.32786885245902	29	1	methylated (>=50%)	Q14DG7	Transmembrane protein 132B	NA	hit, no GO BP
GN004088	Chromosome_1A	8167	2	228	36.91686053630464	0.8193759092193189	1.2050653594771241	197	0	0.6451612903225806	33	0	1.2862488306828812	164	0	15.888382687927107	29	0.13793103448275862	unmethylated (<10%)	A2VDD2	Dynein light chain Tctex-type 5-B (Tctex1 domain-containing protein 1-B)	microtubule-based movement [GO:0007018]	hit with GO BP
GN004089	Chromosome_1A	6941	9	81	35.58565048263939	0.3737674511368169	76.12436448963629	81	0.8148148148148148	79.59282598158022	36	0.8333333333333334	73.77908882333661	45	0.8	4.47066128531512	35	0	methylated (>=50%)	Q7ZYR8	Arginine/serine-rich coiled-coil protein 2	NA	hit, no GO BP
GN004090	Chromosome_1A	18156	5	142	32.32540207094073	0.3140755539854057	88.89134764328391	137	0.9635036496350365	69.10569105691057	12	0.6666666666666666	90.3359848035142	125	0.992	7.072013799051315	24	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004091	Chromosome_1A	5464	8	50	35.7796486090776	0.28773038441284887	89.26746166950596	49	1	90.40114613180516	17	1	88.91372373714796	32	1	90.36496350364963	21	0.9523809523809523	methylated (>=50%)	Q6AYY8	Acetyl-coenzyme A transporter 1 (AT-1) (Acetyl-CoA transporter 1) (Solute carrier family 33 member 1)	acetyl-CoA transmembrane transport [GO:0035348]	hit with GO BP
GN004092	Chromosome_1A	19334	12	271	35.83324712940933	0.4378078099457101	58.62611073137389	271	0.5129151291512916	33.61144219308701	129	0.23255813953488372	71.74864526886202	142	0.7676056338028169	90.13398294762484	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004093	Chromosome_1A	2341	4	77	41.093549765057666	0.7794526530629894	0.6134969325153374	77	0	0.6669842782277274	69	0	0.3929273084479371	8	0	0.36304961678096004	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004094	Chromosome_1A	276	1	10	47.82608695652174	0.640817274204783	0.5571030640668524	10	0	0.5571030640668524	10	0	NA	NA	NA	1.0341726618705036	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004095	Chromosome_1A	2250	1	106	37.644444444444446	1.620993393687301	0.41934215699122	106	0	0.41934215699122	106	0	NA	NA	NA	1.3533834586466165	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004096	Chromosome_1A	4001	4	101	34.11647088227943	0.8681681075228159	0.5050505050505051	101	0	0.5175388154111559	36	0	0.5001136621959537	65	0	0.49226441631504925	37	0	unmethylated (<10%)	Q8MSU3	Ferric reductase 1 (EC 1.-.-.-) (stromal cell-derived receptor 2)	intracellular iron ion homeostasis [GO:0006879]	hit with GO BP
GN004097	Chromosome_1A	10918	15	250	35.05220736398608	0.745464397417872	0.7186440677966102	250	0	0.8492569002123143	73	0	0.6659689848729902	177	0	0.869167429094236	43	0	unmethylated (<10%)	P31637	Sodium/myo-inositol cotransporter (Na(+)/myo-inositol cotransporter) (Sodium/myo-inositol transporter 1) (SMIT1) (Solute carrier family 5 member 3)	D-glucose transmembrane transport [GO:1904659]; fucose transmembrane transport [GO:0015756]; myo-inositol transport [GO:0015798]; pentose transmembrane transport [GO:0015750]; polyol transmembrane transport [GO:0015791]	hit with GO BP
GN004098	Chromosome_1A	18651	25	207	34.87212481904456	0.3668219843667561	70.67080263668089	202	0.8118811881188119	76.49253731343283	64	0.859375	68.51556688980979	138	0.7898550724637681	0.9506564056133997	42	0	methylated (>=50%)	B1AJZ9	Forkhead-associated domain-containing protein 1 (FHA domain-containing protein 1)	NA	hit, no GO BP
GN003534	Chromosome_1A	744	2	24	41.53225806451613	0.7484282001844245	0.5012531328320802	24	0	0.42492917847025496	22	0	1.0869565217391304	2	0	0.879277566539924	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004099	Chromosome_1A	5714	11	30	34.389219460973045	0.17977334840708353	70.43385109801821	30	0.8333333333333334	68.02120141342756	9	0.7777777777777778	71.48347425057648	21	0.8571428571428571	85.81504702194357	21	1	methylated (>=50%)	P17809	Solute carrier family 2, facilitated glucose transporter member 1 (Glucose transporter type 1, erythrocyte/brain) (GLUT-1) (GT1)	cellular hyperosmotic response [GO:0071474]; cellular response to glucose starvation [GO:0042149]; cellular response to mechanical stimulus [GO:0071260]; central nervous system development [GO:0007417]; cerebral cortex development [GO:0021987]; D-glucose import across plasma membrane [GO:0098708]; D-glucose transmembrane transport [GO:1904659]; dehydroascorbic acid transport [GO:0070837]; female pregnancy [GO:0007565]; long-chain fatty acid import across plasma membrane [GO:0015911]; photoreceptor cell maintenance [GO:0045494]; protein-containing complex assembly [GO:0065003]; response to hypoxia [GO:0001666]; response to insulin [GO:0032868]; response to Thyroglobulin triiodothyronine [GO:1904016]; transport across blood-brain barrier [GO:0150104]; xenobiotic transport [GO:0042908]	hit with GO BP
GN004100	Chromosome_1A	2077	7	61	37.024554646124216	0.8604794892692204	0.3280644199224575	61	0	0.32036613272311215	41	0	0.3424657534246575	20	0	0.6077180188392586	56	0	unmethylated (<10%)	P42674	Blastula protease 10 (EC 3.4.24.-)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN004101	Chromosome_1A	1890	4	50	36.82539682539682	0.7817735090462363	0.7161703731624576	50	0	0.8946322067594433	41	0	0.15600624024961	9	0	6.361922714420358	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004102	Chromosome_1A	984	1	11	41.666666666666664	0.26575658621620957	89.88764044943821	11	1	89.88764044943821	11	1	NA	NA	NA	85.32563891178896	15	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003531	Chromosome_1A	835	2	5	35.449101796407184	0.19285846267553586	59.55882352941177	5	0.8	81.11111111111111	2	1	48.9010989010989	3	0.6666666666666666	44.33701657458563	15	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003530	Chromosome_1A	5893	6	49	35.44883760393687	0.2673012622793603	79.05333804309431	49	0.8571428571428571	90.3677758318739	11	1	76.19469026548673	38	0.8157894736842105	91.47442326980944	18	0.9444444444444444	methylated (>=50%)	P47756	F-actin-capping protein subunit beta (CapZ beta)	actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]	hit with GO BP
GN004104	Chromosome_1A	16843	19	210	34.23380632903877	0.42872129534064995	90.37209960384833	206	0.9951456310679612	91.17766086604614	41	1	90.20145735105015	165	0.9939393939393939	62.69592476489028	5	1	methylated (>=50%)	A1Z9X0	Atypical protein kinase C (EC 2.7.11.13)	adherens junction organization [GO:0034332]; apical protein localization [GO:0045176]; asymmetric neuroblast division [GO:0055059]; asymmetric protein localization involved in cell fate determination [GO:0045167]; branching involved in open tracheal system development [GO:0060446]; cell-cell junction assembly [GO:0007043]; compound eye retinal cell programmed cell death [GO:0046667]; epithelial cell morphogenesis [GO:0003382]; establishment of cell polarity [GO:0030010]; establishment of epithelial cell apical/basal polarity [GO:0045198]; establishment of epithelial cell planar polarity [GO:0090163]; establishment of mitotic spindle orientation [GO:0000132]; establishment or maintenance of cell polarity [GO:0007163]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; establishment or maintenance of neuroblast polarity [GO:0045196]; establishment or maintenance of polarity of embryonic epithelium [GO:0016332]; establishment or maintenance of polarity of follicular epithelium [GO:0016334]; exocyst localization [GO:0051601]; germarium-derived oocyte fate determination [GO:0007294]; intracellular signal transduction [GO:0035556]; maintenance of cell polarity [GO:0030011]; melanotic encapsulation of foreign target [GO:0035011]; memory [GO:0007613]; morphogenesis of a polarized epithelium [GO:0001738]; negative regulation of hippo signaling [GO:0035331]; nuclear envelope budding [GO:0140591]; oocyte anterior/posterior axis specification [GO:0007314]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of neuroblast proliferation [GO:0002052]; positive regulation of smoothened signaling pathway [GO:0045880]; protein localization to plasma membrane [GO:0072659]; regulation of intracellular mRNA localization [GO:1904580]; regulation of polarized epithelial cell differentiation [GO:0030860]; sensory organ development [GO:0007423]; spermatogenesis [GO:0007283]; synapse assembly [GO:0007416]; terminal branching, open tracheal system [GO:0007430]; zonula adherens assembly [GO:0045186]	hit with GO BP
GN003528	Chromosome_1A	260	1	9	55	0.5032258064516129	91.72932330827068	9	1	91.72932330827068	9	1	NA	NA	NA	92.4884437596302	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004105	Chromosome_1A	297	1	10	54.54545454545455	0.5192307692307693	0	10	0	0	10	0	NA	NA	NA	0.6784771956275915	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004106	Chromosome_1A	5619	1	13	45.13258586937177	0.0633979026192524	12.76595744680851	11	0.09090909090909091	12.76595744680851	11	0.09090909090909091	NA	NA	NA	0.5750431282346176	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003526	Chromosome_1A	798	1	19	38.095238095238095	0.6730291193181818	88.4476534296029	19	1	88.4476534296029	19	1	NA	NA	NA	22.22222222222222	10	0.1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003525	Chromosome_1A	7908	6	96	36.91198786039454	0.35666807610993656	69.66565349544074	84	0.8452380952380952	80.94131319000581	43	0.9534883720930233	57.29764181007011	41	0.7317073170731707	35.56085918854415	14	0.2857142857142857	methylated (>=50%)	P47236	Paired box protein Pax-1	embryo development ending in birth or egg hatching [GO:0009792]; regulation of transcription by RNA polymerase II [GO:0006357]; sclerotome development [GO:0061056]; skeletal system development [GO:0001501]	hit with GO BP
GN004107	Chromosome_1A	31915	24	272	35.11828293905687	0.2774888095121193	83.88473192752458	272	0.9595588235294118	91.22883195831524	44	1	82.66512835304297	228	0.9517543859649122	92.44558258642766	35	0.9714285714285714	methylated (>=50%)	O43156	TELO2-interacting protein 1 homolog (Protein SMG10)	positive regulation of DNA damage checkpoint [GO:2000003]; protein stabilization [GO:0050821]; regulation of TOR signaling [GO:0032006]	hit with GO BP
GN004108	Chromosome_1A	25858	14	417	35.74909119034728	0.5060188483208551	79.46114325013147	414	0.9323671497584541	79.2016806722689	29	0.896551724137931	79.47705122150187	385	0.935064935064935	78.86497064579257	15	0.8666666666666667	methylated (>=50%)	P52569	Cationic amino acid transporter 2 (CAT-2) (CAT2) (Low affinity cationic amino acid transporter 2) (Solute carrier family 7 member 2)	amino acid import across plasma membrane [GO:0089718]; amino acid transport [GO:0006865]; L-alpha-amino acid transmembrane transport [GO:1902475]; L-amino acid transport [GO:0015807]; L-arginine import across plasma membrane [GO:0097638]; L-arginine transmembrane transport [GO:1903826]; L-lysine transmembrane transport [GO:1903401]; L-ornithine transmembrane transport [GO:1903352]; regulation of macrophage activation [GO:0043030]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN004109	Chromosome_1A	1392	1	56	42.456896551724135	0.8931460390934715	0.14958863126402394	56	0	0.14958863126402394	56	0	NA	NA	NA	0.4882379050155348	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004110	Chromosome_1A	1273	5	45	39.51296150824823	0.906264831514001	12.614789753504109	45	0.13333333333333333	16.607773851590107	32	0.1875	3.9755351681957185	13	0	0.6862133499688085	66	0	sparse (10-50%)	Q6TL19	Guanylate cyclase 2G (EC 4.6.1.2) (Guanylyl cyclase receptor G) (mGC-G)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN004111	Chromosome_1A	3252	10	21	35.20910209102091	0.21063735287586055	91.71875	21	1	91.95402298850574	8	1	91.59763313609467	13	1	86.82926829268293	15	1	methylated (>=50%)	O02654	Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)	glycolytic process [GO:0006096]	hit with GO BP
GN003521	Chromosome_1A	22237	24	217	38.50789225165265	0.26663555734586103	89.62608484061968	203	0.9802955665024631	86.78836633663366	57	0.9298245614035088	90.63427503572606	146	1	45.1120797011208	52	0.36538461538461536	methylated (>=50%)	Q9ES00	Ubiquitin conjugation factor E4 B (EC 2.3.2.27) (RING-type E3 ubiquitin transferase E4 B) (Ubiquitin fusion degradation protein 2)	ERAD pathway [GO:0036503]; granzyme-mediated apoptotic signaling pathway [GO:0008626]; neuron projection development [GO:0031175]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein catabolic process [GO:0030163]; protein folding [GO:0006457]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; response to endoplasmic reticulum stress [GO:0034976]; response to UV [GO:0009411]; ubiquitin-dependent protein catabolic process [GO:0006511]; ventricular trabecula myocardium morphogenesis [GO:0003222]	hit with GO BP
GN004112	Chromosome_1A	6717	6	77	35.53669793062379	0.36311014008843107	89.23321414382201	76	0.9736842105263158	95.32710280373831	18	1	87.79169737165316	58	0.9655172413793104	93.06029579067122	31	1	methylated (>=50%)	Q8C811	Solute carrier family 35 member E2A	blastocyst hatching [GO:0001835]	hit with GO BP
GN004113	Chromosome_1A	1836	1	86	43.7363834422658	1.0088556641748132	0.77209036316843	86	0	0.77209036316843	86	0	NA	NA	NA	0.5492349941153394	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004114	Chromosome_1A	8520	8	72	33.568075117370896	0.30044608485603624	63.32802185294787	69	0.782608695652174	47.12643678160919	9	0.6666666666666666	65.51278739343839	60	0.8	3.28125	10	0	methylated (>=50%)	Q3SYU1	Nucleolar complex protein 2 homolog (Protein NOC2 homolog) (NOC2-like protein) (Novel INHAT repressor)	ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN004115	Chromosome_1A	666	1	25	44.5945945945946	0.7569558101472995	0.4457652303120357	25	0	0.4457652303120357	25	0	NA	NA	NA	1.8997707173272191	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004116	Chromosome_1A	2834	8	54	34.968242766407904	0.6235423542354236	54.63709677419355	10	1	54.63709677419355	10	1	NA	NA	NA	70.68141815438773	48	0.7291666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004117	Chromosome_1A	12664	20	357	36.576121288692356	0.844204868663209	0.7153165589508691	347	0	0.8383233532934131	117	0	0.6589182758305115	230	0	0.4935225169648365	40	0	unmethylated (<10%)	Q6MG64	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN004118	Chromosome_1A	5377	7	89	36.74911660777385	0.4911787497626489	79.94692320451152	89	0.9775280898876404	92.43869209809264	34	1	75.92633194474895	55	0.9636363636363636	68.68613138686132	21	0.9047619047619048	methylated (>=50%)	Q58DH1	XIAP-associated factor 1	apoptotic process [GO:0006915]	hit with GO BP
GN004119	Chromosome_1A	14914	3	125	33.80716105672523	0.29345143274504	69.45030226346127	125	0.808	51.64271047227926	20	0.75	72.2756149209969	105	0.819047619047619	51.766268260292165	60	0.6	methylated (>=50%)	P48441	Alpha-L-iduronidase (EC 3.2.1.76)	adult locomotory behavior [GO:0008344]; adult walking behavior [GO:0007628]; bone development [GO:0060348]; carbohydrate metabolic process [GO:0005975]; cartilage homeostasis [GO:1990079]; cell morphogenesis [GO:0000902]; chemical homeostasis [GO:0048878]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; extracellular matrix organization [GO:0030198]; glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]; heparin proteoglycan catabolic process [GO:0030211]; limb morphogenesis [GO:0035108]; locomotory behavior [GO:0007626]; lysosome organization [GO:0007040]; memory [GO:0007613]; negative regulation of cartilage development [GO:0061037]; negative regulation of secretion of lysosomal enzymes [GO:0090341]; positive regulation of bone resorption [GO:0045780]; positive regulation of collagen catabolic process [GO:0120158]; skeletal system morphogenesis [GO:0048705]; visual learning [GO:0008542]	hit with GO BP
GN004120	Chromosome_1A	7799	9	126	36.10719322990127	0.49590828254853236	90.7951171230617	124	0.9758064516129032	88.95800933125972	15	1	90.93491124260355	109	0.9724770642201835	78.92030848329048	18	1	methylated (>=50%)	P58058	NAD kinase (EC 2.7.1.23) (Poly(P)/ATP NAD kinase)	NAD+ metabolic process [GO:0019674]; NADP+ biosynthetic process [GO:0006741]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]	hit with GO BP
GN004121	Chromosome_1A	10246	12	122	33.70095647081788	0.41941335036918087	75.84702779468452	122	0.9344262295081968	74.95961227786754	12	0.8333333333333334	75.9064833856478	110	0.9454545454545454	90.20270270270271	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004122	Chromosome_1A	537	1	9	43.76163873370577	0.3505730451182359	0	8	0	0	8	0	NA	NA	NA	68.93844221105527	62	0.6290322580645161	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004123	Chromosome_1A	7738	7	68	34.95735332127165	0.28806681689079844	87.6469177260734	68	0.9852941176470589	85.46042003231018	13	1	88.02816901408451	55	0.9818181818181818	83.89129578574241	30	0.9333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004124	Chromosome_1A	1242	4	39	47.58454106280193	0.5633111596967019	86.23310810810811	39	1	86.49398704902868	37	1	83.49514563106796	2	1	84.81135117703967	72	0.9722222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003509	Chromosome_1A	1688	7	59	44.845971563981045	0.6985970819304153	86.66130976295702	59	0.9661016949152542	87.76441310659477	56	0.9821428571428571	52.56410256410256	3	0.6666666666666666	76.40374331550802	66	0.9848484848484849	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003510	Chromosome_1A	2353	4	121	51.38121546961326	0.7857619914996964	84.54738330975955	119	0.9915966386554622	84.95412844036697	95	0.9894736842105263	83.17901234567901	24	1	87.42985409652076	34	0.9411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004126	Chromosome_1A	540	1	41	56.666666666666664	0.9761904761904762	86.73469387755102	41	1	86.73469387755102	41	1	NA	NA	NA	81.57132512671977	53	0.9433962264150944	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004127	Chromosome_1A	1759	5	73	49.11881750994883	0.6901821035431717	85.06841165972635	68	0.9705882352941176	85.97560975609755	57	0.9649122807017544	81.84281842818429	11	1	83.61244019138756	88	0.9772727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004128	Chromosome_1A	549	1	34	54.09836065573771	0.8663324979114453	86.6412213740458	34	1	86.6412213740458	34	1	NA	NA	NA	85.75114678899082	92	0.9891304347826086	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004129	Chromosome_1A	2151	1	139	53.23105532310553	0.9232329782306623	84.671167791948	139	0.9856115107913669	84.671167791948	139	0.9856115107913669	NA	NA	NA	87.83382789317507	118	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003816	Chromosome_1A	817	2	14	38.188494492044065	0.4700226011916992	73.01075268817205	14	1	72.92682926829268	13	1	73.63636363636364	1	1	59.10126994464344	53	0.5849056603773585	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004130	Chromosome_1A	771	2	23	35.27885862516213	0.9589552238805971	0.7438894792773645	23	0	0.28169014084507044	7	0	1.023890784982935	16	0	0.9154550350026925	36	0	unmethylated (<10%)	P28572	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (Solute carrier family 6 member 9)	glycine import across plasma membrane [GO:1903804]; glycine secretion, neurotransmission [GO:0061537]; glycine transport [GO:0015816]; neurotransmitter uptake [GO:0001504]; positive regulation of heme biosynthetic process [GO:0070455]; positive regulation of hemoglobin biosynthetic process [GO:0046985]; regulation of synaptic transmission, glycinergic [GO:0060092]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN004131	Chromosome_1A	2097	1	83	41.15402956604673	0.9380679307111058	0.4714016341923319	83	0	0.4714016341923319	83	0	NA	NA	NA	0.45317220543806647	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003502	Chromosome_1A	258	1	0	37.98449612403101	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004132	Chromosome_1A	5391	3	62	36.5238360230013	0.34826524849593743	73.52385451110061	60	0.7666666666666667	45.378151260504204	18	0.5555555555555556	87.84746970776906	42	0.8571428571428571	59.81835264641403	49	0.673469387755102	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004133	Chromosome_1A	879	3	21	40.386803185438	0.5954516129032258	0	21	0	0	20	0	0	1	0	2.644003777148253	61	0	unmethylated (<10%)	Q05737	GTP-binding protein YPTM2	NA	hit, no GO BP
GN004134	Chromosome_1A	2118	7	64	44.61756373937677	0.6077311406615675	0.7899628252788105	64	0	0.7607192254495159	47	0	0.8498583569405099	17	0	1.0501193317422435	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003500	Chromosome_1A	1233	1	54	42.416869424168695	0.9749604638903532	0.6378802747791953	54	0	0.6378802747791953	54	0	NA	NA	NA	0.44780296669465436	58	0	unmethylated (<10%)	Q86WB7	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (HmUnc-93A) (Unc-93A)	NA	hit, no GO BP
GN004135	Chromosome_1A	637	2	13	54.47409733124019	0.2885768051296348	11.764705882352942	9	0	13.88888888888889	8	0	3.5714285714285716	1	0	2.366345311130587	61	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004136	Chromosome_1A	3345	2	114	37.907324364723465	0.9498296269727403	0.6066536203522505	114	0	0.3367003367003367	35	0	0.6884242733299337	79	0	0.6381798002219756	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004137	Chromosome_1A	2882	5	89	39.34767522553782	0.8005555555555556	0.5720991638550682	77	0	0.682261208576998	22	0	0.5525815921257123	55	0	0.5893569076096378	35	0	unmethylated (<10%)	P51893	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.13.2.1) (S-adenosyl-L-homocysteine hydrolase A)	L-methionine cycle [GO:0033353]	hit with GO BP
GN003484	Chromosome_1A	2124	3	30	35.96986817325801	0.4378659190236662	22.80369903320723	18	0	19.32681867535288	4	0	23.6382590565546	14	0	37.5041542040545	29	0.3793103448275862	sparse (10-50%)	P51893	Adenosylhomocysteinase A (AdoHcyase A) (EC 3.13.2.1) (S-adenosyl-L-homocysteine hydrolase A)	L-methionine cycle [GO:0033353]	hit with GO BP
GN003495	Chromosome_1A	153	1	5	52.287581699346404	0.498046875	23.815028901734102	3	0	23.815028901734102	3	0	NA	NA	NA	46.87545100303074	39	0.6153846153846154	NA	O93477	Adenosylhomocysteinase B (AdoHcyase B) (EC 3.13.2.1) (S-adenosyl-L-homocysteine hydrolase B)	L-methionine cycle [GO:0033353]	hit with GO BP
GN004138	Chromosome_1A	704	2	11	40.34090909090909	0.38782051282051283	26.070038910505836	10	0.1	21.845425867507885	8	0	45.62043795620438	2	0.5	7.756186679953496	49	0.12244897959183673	sparse (10-50%)	O93477	Adenosylhomocysteinase B (AdoHcyase B) (EC 3.13.2.1) (S-adenosyl-L-homocysteine hydrolase B)	L-methionine cycle [GO:0033353]	hit with GO BP
GN003481	Chromosome_1A	3391	4	70	33.264523739309936	0.7481993979606311	2.0442571127502633	70	0	2.2448979591836733	20	0	1.9920318725099602	50	0	1.2933968686181077	40	0	unmethylated (<10%)	P78417	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)	cellular response to arsenic-containing substance [GO:0071243]; glutathione metabolic process [GO:0006749]; L-ascorbic acid metabolic process [GO:0019852]; negative regulation of release of sequestered calcium ion into cytosol [GO:0051280]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion [GO:0014810]; regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion [GO:0010881]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN003480	Chromosome_1A	2304	2	88	41.75347222222222	0.8764394646747588	2.5886101154918357	88	0	1.3120899718837864	38	0	3.53185595567867	50	0	0.8706928492034087	96	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004140	Chromosome_1A	16709	18	313	35.956670058052545	0.5878107691339376	95.40949076942138	313	0.9968051118210862	95.34150612959719	49	1	95.42409874313239	264	0.9962121212121212	96.68168783285539	31	1	methylated (>=50%)	Q8R2N2	U3 small nucleolar RNA-associated protein 4 homolog (Cirhin) (Testis-expressed gene 292 protein)	maturation of SSU-rRNA [GO:0030490]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; regulation of DNA-templated transcription [GO:0006355]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN004141	Chromosome_1A	37630	34	561	35.90752059526973	0.4689016895776339	89.53728597707655	551	0.9927404718693285	93.26612136199353	108	1	88.88556419974732	443	0.9909706546275395	60.556348074179745	46	0.717391304347826	methylated (>=50%)	Q10569	Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit)	NA	hit, no GO BP
GN004142	Chromosome_1A	16601	9	262	37.72664297331486	0.4436722572205626	79.97143877186718	235	0.8978723404255319	89.61318051575931	24	1	78.90395749068126	211	0.8862559241706162	75.11537096201633	48	0.9166666666666666	methylated (>=50%)	Q99L04	Dehydrogenase/reductase SDR family member 1 (EC 1.1.1.-) (Short chain dehydrogenase/reductase family 19C member 1) (Protein SDR19C1)	NA	hit, no GO BP
GN004143	Chromosome_1A	12971	15	361	35.05512296661784	0.9059885202872366	0.953632279393066	355	0	0.5432814197754436	44	0	1.0080161282580522	311	0	0.43627298223745714	59	0	unmethylated (<10%)	A0A481NSZ4	Bactericidal permeability-increasing protein (BPI) (Lipopolysaccharide-binding protein) (LBP)	NA	hit, no GO BP
GN003477	Chromosome_1A	3381	6	92	35.40372670807454	0.8683994528043776	0.8318739054290718	92	0	1.3779527559055118	16	0	0.6756756756756757	76	0	0.6179473401397099	71	0	unmethylated (<10%)	A0A481NSZ4	Bactericidal permeability-increasing protein (BPI) (Lipopolysaccharide-binding protein) (LBP)	NA	hit, no GO BP
GN003476	Chromosome_1A	5396	10	117	34.840622683469235	0.714565278166061	1.9940528249081686	117	0	1.8050541516245486	39	0	2.0715166461159065	78	0	1.051779935275081	38	0	unmethylated (<10%)	A0A481NSZ4	Bactericidal permeability-increasing protein (BPI) (Lipopolysaccharide-binding protein) (LBP)	NA	hit, no GO BP
GN003475	Chromosome_1A	22939	15	493	35.16282313963119	0.6972515386459817	1.47627032149887	491	0	0.968054211035818	38	0	1.5176600441501105	453	0	1.2733784321528054	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004144	Chromosome_1A	249	1	6	41.76706827309237	0.5737327188940092	0	6	0	0	6	0	NA	NA	NA	0.6497948016415869	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004145	Chromosome_1A	699	1	20	46.065808297567955	0.5440535491905355	2.329450915141431	20	0	2.329450915141431	20	0	NA	NA	NA	2.671555788370875	28	0	unmethylated (<10%)	Q91XU0	ATPase WRNIP1 (EC 3.6.1.-) (Werner helicase-interacting protein 1)	DNA synthesis involved in DNA repair [GO:0000731]; DNA-templated DNA replication [GO:0006261]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN004146	Chromosome_1A	20974	7	273	35.7967006770287	0.4074186180545179	81.64446657537657	270	0.8925925925925926	81.86274509803921	22	0.8636363636363636	81.62646543592508	248	0.8951612903225806	92.40674955595027	29	1	methylated (>=50%)	Q91XU0	ATPase WRNIP1 (EC 3.6.1.-) (Werner helicase-interacting protein 1)	DNA synthesis involved in DNA repair [GO:0000731]; DNA-templated DNA replication [GO:0006261]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN003471	Chromosome_1A	1533	3	9	32.224396607958255	0.2297661870503597	1.749271137026239	9	0	2.5641025641025643	2	0	1.644736842105263	7	0	0.5015045135406219	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003470	Chromosome_1A	1618	3	64	39.122373300370825	1.0376783710117043	0.2959830866807611	64	0	0.3203074951953876	49	0	0.24875621890547264	15	0	0.5887300252312868	33	0	unmethylated (<10%)	Q99715	Collagen alpha-1(XII) chain	collagen fibril organization [GO:0030199]; endodermal cell differentiation [GO:0035987]	hit with GO BP
GN003469	Chromosome_1A	6071	5	180	39.58161752594301	0.7705607680927848	0.5974025974025974	179	0	0.4797047970479705	68	0	0.6613226452905812	111	0	2.3638666103841284	65	0	unmethylated (<10%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN003466	Chromosome_1A	1626	2	26	34.31734317343174	0.5685314685314685	76.35440180586907	26	0.9615384615384616	78.37837837837837	4	0.75	76.0079312623926	22	1	74.89860297431275	29	0.9310344827586207	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003467	Chromosome_1A	642	2	14	36.60436137071651	0.6552930883639545	95.94477998274374	14	1	95.91254752851711	13	1	96.26168224299066	1	1	25.1569290197972	43	0.18604651162790697	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003468	Chromosome_1A	24691	12	436	35.794419019075775	0.5529860584308153	68.08943663962461	415	0.8361445783132531	85.00784929356358	34	0.9411764705882353	67.45740843914025	381	0.8267716535433071	84.65011286681715	9	1	methylated (>=50%)	A7Y2W8	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (xGlyT1) (Solute carrier family 6 member 9)	glycine import across plasma membrane [GO:1903804]; neurotransmitter transport [GO:0006836]; regulation of synaptic transmission, glycinergic [GO:0060092]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN004149	Chromosome_1A	393	1	21	44.783715012722645	1.065865943432778	0.12345679012345678	21	0	0.12345679012345678	21	0	NA	NA	NA	1.170177198261451	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003464	Chromosome_1A	2287	3	30	36.59816353301268	0.39343754659204294	81.68557536466774	30	0.9	92.8902627511592	13	1	75.66445182724253	17	0.8235294117647058	89.77945131791286	26	1	methylated (>=50%)	Q5RDW1	Mitochondrial ribosome-associated GTPase 2 (GTP-binding protein 5)	mitochondrial large ribosomal subunit assembly [GO:1902775]; regulation of mitochondrial translation [GO:0070129]; regulation of respiratory system process [GO:0044065]	hit with GO BP
GN004151	Chromosome_1A	174	1	4	47.12643678160919	0.42028985507246375	0.4149377593360996	4	0	0.4149377593360996	4	0	NA	NA	NA	0.7168458781362007	63	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004152	Chromosome_1A	3963	1	94	43.8808983093616	0.4955463325085801	96.72787193973635	94	1	96.72787193973635	94	1	NA	NA	NA	94.65648854961832	36	1	methylated (>=50%)	Q5SVQ8	Zinc finger and BTB domain-containing protein 41	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003461	Chromosome_1A	159	1	3	48.42767295597484	0.3285123966942149	86.04651162790698	3	1	86.04651162790698	3	1	NA	NA	NA	54.491725768321515	21	0.7142857142857143	NA	NA	NA	NA	no Swiss-Prot hit
GN003460	Chromosome_1A	2604	1	51	40.514592933947775	0.4773241896875202	86.07427055702918	51	0.9803921568627451	86.07427055702918	51	0.9803921568627451	NA	NA	NA	37.94295592048401	24	0.2916666666666667	methylated (>=50%)	Q9U3V5	Protein tiptop	compound eye development [GO:0048749]; epidermis morphogenesis [GO:0048730]; Malpighian tubule stellate cell differentiation [GO:0061330]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]; specification of segmental identity, head [GO:0007380]	hit with GO BP
GN004154	Chromosome_1A	2472	3	64	37.98543689320388	0.7196833917117773	87.37466748516472	64	0.984375	94.68085106382979	22	1	85.63465923486191	42	0.9761904761904762	91.80327868852459	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004155	Chromosome_1A	10561	5	120	37.420698797462364	0.33207498125835383	77.82710280373831	120	0.925	83.22122571001495	46	0.9782608695652174	75.3738953093134	74	0.8918918918918919	58.690330477356184	24	0.7083333333333334	methylated (>=50%)	O90760	Putative ankyrin repeat protein FPV031	NA	hit, no GO BP
GN004156	Chromosome_1A	1086	1	51	42.9097605893186	1.027779324166342	0.38204393505253104	42	0	0.38204393505253104	42	0	NA	NA	NA	12.305516265912306	36	0.2777777777777778	unmethylated (<10%)	Q9WTK8	Meiotic recombination protein SPO11 (EC 5.6.2.2)	double-strand break repair involved in meiotic recombination [GO:1990918]; homologous chromosome pairing at meiosis [GO:0007129]; male meiosis I [GO:0007141]; meiotic DNA double-strand break formation [GO:0042138]; meiotic DNA double-strand break processing [GO:0000706]; meiotic telomere clustering [GO:0045141]; oogenesis [GO:0048477]; ovarian follicle development [GO:0001541]; protein localization to chromosome [GO:0034502]; reciprocal meiotic recombination [GO:0007131]; spermatid development [GO:0007286]; synaptonemal complex assembly [GO:0007130]	hit with GO BP
GN004157	Chromosome_1A	1800	1	44	43.44444444444444	0.5243921817892897	91.35483870967742	44	0.9772727272727273	91.35483870967742	44	0.9772727272727273	NA	NA	NA	92.65822784810126	12	1	methylated (>=50%)	Q5RGB8	Kelch-like protein 26	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN004158	Chromosome_1A	3879	5	50	34.41608662026295	0.43653330212290903	90.37433155080214	49	1	91.06239460370995	11	1	90.25194961007799	38	1	83.58547655068078	37	0.972972972972973	methylated (>=50%)	Q96A23	Copine-4 (Copine IV) (Copine-8)	cellular response to calcium ion [GO:0071277]	hit with GO BP
GN004159	Chromosome_1A	31049	14	376	33.443911237076875	0.433301785180088	70.72471523583823	375	0.8053333333333333	88.26530612244898	40	1	69.14937932183621	335	0.7820895522388059	77.8688524590164	15	0.9333333333333333	methylated (>=50%)	O75131	Copine-3 (Copine III)	cellular response to calcium ion [GO:0071277]; cellular response to growth factor stimulus [GO:0071363]; ERBB2 signaling pathway [GO:0038128]; glycerophospholipid biosynthetic process [GO:0046474]; positive regulation of cell migration [GO:0030335]	hit with GO BP
GN004160	Chromosome_1A	6275	5	83	35.28286852589641	0.4259473561535725	81.64251207729468	83	0.9397590361445783	88.05970149253731	18	1	80.29638906282614	65	0.9230769230769231	2.0229007633587788	68	0	methylated (>=50%)	Q08BG1	Transmembrane protein with metallophosphoesterase domain (EC 3.1.-.-)	NA	hit, no GO BP
GN004161	Chromosome_1A	5108	4	147	37.58809710258418	0.8185049734296226	0.8542058780946865	146	0	0.7986309184255562	45	0	0.8731082654249127	101	0	0.1939487975174554	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004162	Chromosome_1A	8799	4	197	39.50448914649392	0.5754999593292818	39.20714940421632	192	0.359375	46.35879218472469	29	0.41379310344827586	38.147855827413835	163	0.3496932515337423	9.953464322647363	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004163	Chromosome_1A	2738	2	31	34.03944485025566	0.39181634791600306	65.61910747957259	31	0.5483870967741935	74.8639825897715	20	0.55	52.976190476190474	11	0.5454545454545454	3.491096532333646	77	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004164	Chromosome_1A	54559	18	767	35.867592881101196	0.4385120472326171	71.59383816037831	760	0.8671052631578947	84.53781512605042	96	0.9791666666666666	70.20961110736671	664	0.8509036144578314	71.80645161290323	25	0.72	methylated (>=50%)	Q14028	Cyclic nucleotide-gated channel beta-1 (CNG channel beta-1) (Cyclic nucleotide-gated cation channel 4) (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel gamma) (Cyclic nucleotide-gated cation channel modulatory subunit) (Glutamic acid-rich protein) (GARP)	calcium ion transport [GO:0006816]; detection of chemical stimulus involved in sensory perception of smell [GO:0050911]; detection of light stimulus involved in visual perception [GO:0050908]; G protein-coupled receptor signaling pathway [GO:0007186]; membrane depolarization [GO:0051899]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; olfactory nerve maturation [GO:0021630]; potassium ion transport [GO:0006813]; regulation of cytosolic calcium ion concentration [GO:0051480]; response to odorant [GO:1990834]; retina homeostasis [GO:0001895]; sensory perception of smell [GO:0007608]; sodium ion transport [GO:0006814]; visual perception [GO:0007601]	hit with GO BP
GN004165	Chromosome_1A	760	2	9	35.921052631578945	0.3906339234723015	96.8342644320298	9	1	96.17021276595744	4	1	97.35099337748345	5	1	95.12905911740216	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004166	Chromosome_1A	918	1	38	44.44444444444444	0.8392234224264441	0.30432136335970783	38	0	0.30432136335970783	38	0	NA	NA	NA	0.6485849056603774	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004167	Chromosome_1A	801	1	37	45.94257178526841	0.8754098360655738	0.9249183895538629	37	0	0.9249183895538629	37	0	NA	NA	NA	0.5973715651135006	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004168	Chromosome_1A	750	1	29	40.266666666666666	0.957306338028169	0.5668016194331984	29	0	0.5668016194331984	29	0	NA	NA	NA	0.49313893653516294	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003434	Chromosome_1A	1036	2	32	37.93436293436294	0.8783848232738064	0.5082932049224184	31	0	0.49504950495049505	25	0	0.539568345323741	6	0	0.5384329743780171	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004170	Chromosome_1A	918	1	37	44.226579520697165	0.8252186588921283	0.3341687552213868	25	0	0.3341687552213868	25	0	NA	NA	NA	0.702576112412178	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003440	Chromosome_1A	918	1	38	44.11764705882353	0.8518681318681318	0.5412719891745602	28	0	0.5412719891745602	28	0	NA	NA	NA	0.743810434597811	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004172	Chromosome_1A	225	1	13	52	1.0364989369241673	0.39800995024875624	13	0	0.39800995024875624	13	0	NA	NA	NA	0.4019138755980861	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004173	Chromosome_1A	1131	1	51	45.18125552608311	0.8917903525046382	0.20833333333333334	51	0	0.20833333333333334	51	0	NA	NA	NA	0.5977496483825597	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004174	Chromosome_1A	1173	1	49	45.950554134697356	0.7930706184286779	0.54421768707483	38	0	0.54421768707483	38	0	NA	NA	NA	0.6066262249183387	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003424	Chromosome_1A	3642	4	140	40.801757276221856	0.9241560560061625	0.6578947368421053	125	0	0.43252595155709345	84	0	0.8896797153024911	41	0	2.200406228842248	59	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN001344	Chromosome_1A	291	1	10	41.580756013745706	0.8074361820199778	0.6289308176100629	10	0	0.6289308176100629	10	0	NA	NA	NA	0.5185825410544511	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004175	Chromosome_1A	588	1	13	41.326530612244895	0.5178861788617887	11.040339702760084	11	0	11.040339702760084	11	0	NA	NA	NA	8.004326663061114	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003422	Chromosome_1A	534	1	5	36.89138576779026	0.27576946911795086	2.2222222222222223	5	0	2.2222222222222223	5	0	NA	NA	NA	1.7672151127361364	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004177	Chromosome_1A	768	2	15	48.4375	0.34128277292253	87.61904761904762	14	1	91.81494661921708	13	1	52.94117647058823	1	1	94.57409568261377	41	1	methylated (>=50%)	Q28F51	TAR DNA-binding protein 43 (TDP-43)	regulation of circadian rhythm [GO:0042752]; regulation of gene expression [GO:0010468]; regulation of protein stability [GO:0031647]; RNA splicing [GO:0008380]	hit with GO BP
GN004178	Chromosome_1A	1437	2	23	34.864300626304804	0.5268770923003347	91.44634525660965	23	0.9565217391304348	88.17733990147784	10	1	92.95454545454545	13	0.9230769230769231	52.193645990922846	31	0.4838709677419355	methylated (>=50%)	P54363	Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7)	adenine salvage [GO:0006168]; AMP salvage [GO:0044209]	hit with GO BP
GN003420	Chromosome_1A	4973	5	73	34.96883169113212	0.494805637335078	94.61508553654744	73	1	96.34748272458046	31	1	93.48941629249519	42	1	50.33072760072159	34	0.5882352941176471	methylated (>=50%)	Q6DFL0	Coiled-coil domain-containing protein 102A	NA	hit, no GO BP
GN003418	Chromosome_1A	2904	2	77	36.8801652892562	0.8410109823980744	92.21913457721318	74	1	83.52490421455938	11	1	93.22409211691763	63	1	27.570093457943926	39	0.6153846153846154	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003419	Chromosome_1A	8945	4	127	35.85243152599217	0.4438907605514488	89.80435381647837	117	0.9829059829059829	94.24514200298954	19	1	88.80067567567568	98	0.9795918367346939	88.22714681440443	17	1	methylated (>=50%)	Q9P104	Docking protein 5 (Downstream of tyrosine kinase 5) (Insulin receptor substrate 6) (IRS-6) (IRS6)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; regulation of neurotrophin TRK receptor signaling pathway [GO:0051386]	hit with GO BP
GN003412	Chromosome_1A	12306	10	294	35.665529010238906	0.7512932838945039	2.061598050852752	294	0	0.47029702970297027	83	0	2.598813403526364	211	0	0.3852080123266564	55	0	unmethylated (<10%)	P86786	Gigasin-3a	NA	hit, no GO BP
GN003411	Chromosome_1A	1746	1	18	38.65979381443299	0.2764942902890926	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003410	Chromosome_1A	3330	2	25	35.4054054054054	0.2415507996564611	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN004180	Chromosome_1A	870	1	61	47.01149425287356	1.274556895143859	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3616636528028933	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021199	Chromosome_1A	645	1	17	42.945736434108525	0.571689259645464	92.4802110817942	17	1	92.4802110817942	17	1	NA	NA	NA	84.2002600780234	37	0.918918918918919	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004181	Chromosome_1A	321	1	5	40.49844236760124	0.38132573057733427	0.5780346820809249	5	0	0.5780346820809249	5	0	NA	NA	NA	0.5102040816326531	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003407	Chromosome_1A	2641	2	95	38.053767512305946	0.9936986605197912	0.8503020810024614	95	0	1.0801591813530416	49	0	0.7011070110701108	46	0	0.49680624556423	70	0	unmethylated (<10%)	Q99M85	Transcriptional repressor scratch 1 (Scratch homolog 1 zinc finger protein) (SCRT) (Scratch 1) (mScrt)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of DNA-templated transcription [GO:0006355]; regulation of neuron migration [GO:2001222]	hit with GO BP
GN004182	Chromosome_1A	29243	16	533	36.69254180487638	0.5445714971908824	84.74016548120191	502	0.952191235059761	78.73254564983888	37	0.8648648648648649	85.17552736047327	465	0.9591397849462365	62.67098632109431	41	0.6341463414634146	methylated (>=50%)	Q8C3P7	N(6)-adenosine-methyltransferase catalytic subunit METTL3 (EC 2.1.1.348) (Methyltransferase-like protein 3) (N(6)-adenosine-methyltransferase 70 kDa subunit) (MT-A70)	cellular response to UV [GO:0034644]; chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; circadian rhythm [GO:0007623]; DNA damage response [GO:0006974]; dosage compensation by inactivation of X chromosome [GO:0009048]; endothelial to hematopoietic transition [GO:0098508]; forebrain radial glial cell differentiation [GO:0021861]; gliogenesis [GO:0042063]; mRNA catabolic process [GO:0006402]; mRNA destabilization [GO:0061157]; mRNA export from nucleus [GO:0006406]; mRNA modification [GO:0016556]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; oogenesis [GO:0048477]; positive regulation of cap-independent translational initiation [GO:1903679]; positive regulation of mRNA catabolic process [GO:0061014]; positive regulation of translation [GO:0045727]; primary miRNA processing [GO:0031053]; regulation of hematopoietic stem cell differentiation [GO:1902036]; regulation of meiotic cell cycle [GO:0051445]; regulation of T cell differentiation [GO:0045580]; RNA methylation [GO:0001510]; RNA stabilization [GO:0043489]; spermatogenesis [GO:0007283]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN004183	Chromosome_1A	288	1	10	52.77777777777778	0.5007824726134585	89.68253968253968	10	1	89.68253968253968	10	1	NA	NA	NA	83.49112426035504	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004184	Chromosome_1A	9015	11	105	40.31059345535219	0.2867535795916698	80.8830328247804	92	0.9565217391304348	84.14814814814815	41	1	79.40188172043011	51	0.9215686274509803	74.80225988700565	21	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004185	Chromosome_1A	11573	14	142	36.775252743454594	0.3629618422781771	78.25270079849695	142	0.9577464788732394	82.66208251473478	59	0.9661016949152542	76.86728395061728	83	0.9518072289156626	77.9837775202781	15	0.9333333333333333	methylated (>=50%)	Q04164	Putative epidermal cell surface receptor (Stranded at second protein)	axon guidance [GO:0007411]; cell adhesion [GO:0007155]; cell-cell signaling via exosome [GO:0099156]; instar larval development [GO:0002168]; positive regulation of cell differentiation [GO:0045597]	hit with GO BP
GN003405	Chromosome_1A	201	1	7	54.72636815920398	0.4675972083748754	90.39735099337749	7	1	90.39735099337749	7	1	NA	NA	NA	86.9172388868811	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004186	Chromosome_1A	1095	1	18	40.182648401826484	0.407265063228366	5.349794238683128	10	0	5.349794238683128	10	0	NA	NA	NA	15.263157894736842	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004187	Chromosome_1A	1677	1	43	42.039355992844364	0.5805384256203004	50.21645021645022	23	0.5217391304347826	50.21645021645022	23	0.5217391304347826	NA	NA	NA	66.16541353383458	22	0.7727272727272727	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004188	Chromosome_1A	75709	16	1605	38.63345176927446	0.5689094872007597	83.88636977868532	596	0.959731543624161	84.1635687732342	21	0.8571428571428571	83.87470271623482	575	0.9634782608695652	5.56640625	26	0	methylated (>=50%)	Q8BQM4	HEAT repeat-containing protein 3 (Symportin Syo1)	erythrocyte maturation [GO:0043249]; protein import into nucleus [GO:0006606]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN003401	Chromosome_1A	8096	8	112	36.190711462450594	0.42375054034792564	86.50560597971169	112	0.9464285714285714	93.23529411764706	19	1	85.44499381953028	93	0.9354838709677419	86.14718614718615	28	0.8928571428571429	methylated (>=50%)	Q0P570	Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate (diphospho)decarboxylase) (MDDase) (Mevalonate pyrophosphate decarboxylase)	cholesterol biosynthetic process [GO:0006695]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]; isoprenoid biosynthetic process [GO:0008299]; positive regulation of cell population proliferation [GO:0008284]	hit with GO BP
GN004189	Chromosome_1A	3063	5	44	37.38165197518772	0.4177111615278759	89.171974522293	44	0.9090909090909091	91.7617237008872	30	0.9333333333333333	84.79657387580299	14	0.8571428571428571	92.82103134479271	23	1	methylated (>=50%)	O15943	Neural-cadherin (Cadherin-N) (dN-cadherin)	axon extension [GO:0048675]; axon extension involved in axon guidance [GO:0048846]; axon guidance [GO:0007411]; axon target recognition [GO:0007412]; axonal fasciculation [GO:0007413]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of dendrite morphogenesis [GO:0050774]; ommatidial rotation [GO:0016318]; R7 cell development [GO:0045467]; R8 cell development [GO:0045463]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of dendrite morphogenesis [GO:0048814]; retinal ganglion cell axon guidance [GO:0031290]	hit with GO BP
GN004190	Chromosome_1A	711	2	7	36.14627285513362	0.3064655172413793	93.75	7	1	93.42560553633218	6	1	95.23809523809524	1	1	90.21386908619573	29	1	methylated (>=50%)	Q9VJB6	Putative neural-cadherin 2 (Cadherin-N2) (dN2-cadherin)	axon extension involved in axon guidance [GO:0048846]; calcium-dependent cell-cell adhesion [GO:0016339]; cell migration [GO:0016477]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]; neuron projection development [GO:0031175]; ommatidial rotation [GO:0016318]; R7 cell development [GO:0045467]; R8 cell development [GO:0045463]	hit with GO BP
GN004191	Chromosome_1A	8963	11	133	36.7845587414928	0.43874825174825177	85.7907458563536	133	0.9473684210526315	91.53209925167388	63	0.9841269841269841	81.30956040577928	70	0.9142857142857143	87.58389261744966	31	1	methylated (>=50%)	O15943	Neural-cadherin (Cadherin-N) (dN-cadherin)	axon extension [GO:0048675]; axon extension involved in axon guidance [GO:0048846]; axon guidance [GO:0007411]; axon target recognition [GO:0007412]; axonal fasciculation [GO:0007413]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of dendrite morphogenesis [GO:0050774]; ommatidial rotation [GO:0016318]; R7 cell development [GO:0045467]; R8 cell development [GO:0045463]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of dendrite morphogenesis [GO:0048814]; retinal ganglion cell axon guidance [GO:0031290]	hit with GO BP
GN004192	Chromosome_1A	6793	6	77	33.9172677756514	0.395726201509334	71.51233319854428	77	0.7662337662337663	84.42622950819673	37	0.972972972972973	61.2	40	0.575	52.47657295850067	22	0.5	methylated (>=50%)	O15943	Neural-cadherin (Cadherin-N) (dN-cadherin)	axon extension [GO:0048675]; axon extension involved in axon guidance [GO:0048846]; axon guidance [GO:0007411]; axon target recognition [GO:0007412]; axonal fasciculation [GO:0007413]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of dendrite morphogenesis [GO:0050774]; ommatidial rotation [GO:0016318]; R7 cell development [GO:0045467]; R8 cell development [GO:0045463]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of dendrite morphogenesis [GO:0048814]; retinal ganglion cell axon guidance [GO:0031290]	hit with GO BP
GN004193	Chromosome_1A	1272	1	23	38.600628930817614	0.48849557522123893	62.78846153846154	23	0.6956521739130435	62.78846153846154	23	0.6956521739130435	NA	NA	NA	0.5125815470643057	58	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003392	Chromosome_1A	2080	2	55	41.10576923076923	0.6259712403423143	52.16244725738397	55	0.5272727272727272	53.11493018259936	54	0.5370370370370371	0	1	0	0.7836990595611285	51	0	methylated (>=50%)	E0W1I1	Serine/threonine-protein kinase Pink1, mitochondrial (EC 2.7.11.1) (PTEN-induced putative kinase 1)	autophagy of mitochondrion [GO:0000422]; positive regulation of mitochondrial fission [GO:0090141]; regulation of apoptotic process [GO:0042981]	hit with GO BP
GN004195	Chromosome_1A	756	1	30	43.783068783068785	0.8282208588957055	0.2820874471086037	30	0	0.2820874471086037	30	0	NA	NA	NA	0.8863564419119975	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004196	Chromosome_1A	516	1	21	44.76744186046512	0.8219053398058253	1.0186757215619695	21	0	1.0186757215619695	21	0	NA	NA	NA	0.7428571428571429	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004197	Chromosome_1A	456	1	20	44.078947368421055	0.9080047789725209	0.7430997876857749	20	0	0.7430997876857749	20	0	NA	NA	NA	0.8373205741626795	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003393	Chromosome_1A	674	1	28	44.510385756676556	0.8396885428253615	0.5030181086519114	28	0	0.5030181086519114	28	0	NA	NA	NA	1.8439716312056738	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004198	Chromosome_1A	264	1	12	47.34848484848485	0.8301886792452831	2.0242914979757085	12	0	2.0242914979757085	12	0	NA	NA	NA	0.5363984674329502	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004199	Chromosome_1A	636	1	27	44.339622641509436	0.8637826961770624	0.38412291933418696	21	0	0.38412291933418696	21	0	NA	NA	NA	0.8746355685131195	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004200	Chromosome_1A	396	1	19	44.696969696969695	0.9614106823409149	0.23529411764705882	19	0	0.23529411764705882	19	0	NA	NA	NA	0.5090236001850995	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012199	Chromosome_1A	4169	4	41	33.245382585751976	0.35704826122558114	15.310187820147979	37	0	17.91044776119403	23	0	11.24087591240876	14	0	0.507380073800738	41	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004201	Chromosome_1A	834	1	34	43.76498800959233	0.8515315315315315	0.46511627906976744	34	0	0.46511627906976744	34	0	NA	NA	NA	25.12562814070352	48	0.041666666666666664	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003395	Chromosome_1A	447	1	19	43.624161073825505	0.894564988413735	0.8010680907877169	19	0	0.8010680907877169	19	0	NA	NA	NA	0.6970509383378016	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003398	Chromosome_1A	1021	3	42	44.07443682664055	0.8498890122086571	0.6284367635506677	39	0	0.5663430420711975	36	0	2.7027027027027026	3	0	1.053639846743295	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003399	Chromosome_1A	9273	9	105	34.045077105575324	0.3924894245350786	83.06518723994452	105	0.9809523809523809	72.23529411764706	21	0.9047619047619048	85.39174389216512	84	1	1.3775510204081634	29	0	methylated (>=50%)	Q9NQQ7	Solute carrier family 35 member H1 (Ovarian cancer-overexpressed gene 1 protein) (Solute carrier family 35 member C2)	UDP-glucose transmembrane transport [GO:0015786]	hit with GO BP
GN003386	Chromosome_1A	1613	3	51	39.49163050216987	0.8189447486311597	0.5544354838709677	51	0	0.5674653215636822	45	0	0.5025125628140703	6	0	0.6459948320413437	42	0	unmethylated (<10%)	P9WEL6	Ava biosynthesis cluster protein O	NA	hit, no GO BP
GN003387	Chromosome_1A	282	1	5	40.42553191489362	0.4710992315402606	0.7092198581560284	5	0	0.7092198581560284	5	0	NA	NA	NA	1.1688311688311688	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003383	Chromosome_1A	783	1	6	37.16475095785441	0.22597402597402597	0.6410256410256411	6	0	0.6410256410256411	6	0	NA	NA	NA	0.7822685788787483	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003382	Chromosome_1A	2691	5	68	36.677814938684506	0.7529254925196267	0.9665621734587252	68	0	1.1299435028248588	21	0	0.9038322487346349	47	0	0.9569377990430622	49	0	unmethylated (<10%)	Q9DAG6	GLIPR1-like protein 1	binding of sperm to zona pellucida [GO:0007339]; fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]; protein localization involved in acrosome reaction [GO:0060476]	hit with GO BP
GN003378	Chromosome_1A	2317	5	38	36.901165299956844	0.4827718559459578	61.6267942583732	36	0.5	68.81930854533594	26	0.5769230769230769	41.83123877917415	10	0.3	0.29910269192422734	52	0	methylated (>=50%)	Q16534	Transcription factor HLF (Hepatic leukemia factor)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003379	Chromosome_1A	1179	1	22	40.712468193384225	0.45258327371708745	96.77072120559741	22	1	96.77072120559741	22	1	NA	NA	NA	77.75647171620327	29	0.7931034482758621	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004205	Chromosome_1A	249	1	9	45.78313253012048	0.6974789915966386	65.4320987654321	9	0.6666666666666666	65.4320987654321	9	0.6666666666666666	NA	NA	NA	4.61010299166258	52	0.019230769230769232	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004206	Chromosome_1A	21022	18	362	36.39520502330891	0.5208419912602164	86.84141085407687	360	0.9277777777777778	90.89798411728772	93	0.9354838709677419	85.72390194648567	267	0.9250936329588015	39.98377939983779	19	0.21052631578947367	methylated (>=50%)	Q76I76	Protein phosphatase Slingshot homolog 2 (EC 3.1.3.16) (EC 3.1.3.48) (SSH-like protein 2) (SSH-2L) (hSSH-2L)	actin cytoskeleton organization [GO:0030036]; negative regulation of actin filament polymerization [GO:0030837]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN004207	Chromosome_1A	14734	19	221	34.93280847020497	0.4921175684702739	80.59212973294652	221	0.9638009049773756	84.41964285714286	89	0.9438202247191011	78.67901372308378	132	0.9772727272727273	19.666182873730044	28	0.21428571428571427	methylated (>=50%)	A4FU69	EF-hand calcium-binding domain-containing protein 5	NA	hit, no GO BP
GN003376	Chromosome_1A	3832	4	87	36.22129436325678	0.6931636726546906	94.82817284790745	87	1	95.73863636363636	11	1	94.70429068419018	76	1	91.34438305709024	51	1	methylated (>=50%)	Q8N5N7	Large ribosomal subunit protein mL50 (39S ribosomal protein L50, mitochondrial) (L50mt) (MRP-L50)	mitochondrial translation [GO:0032543]	hit with GO BP
GN004208	Chromosome_1A	13583	4	170	35.60332768902305	0.39577485477091656	54.7805282046563	157	0.5796178343949044	78.42835130970724	12	0.8333333333333334	53.27852808768839	145	0.5586206896551724	86.27899379287814	36	0.9722222222222222	methylated (>=50%)	Q9ES34	Ubiquitin-protein ligase E3B (EC 2.3.2.26) (HECT-type ubiquitin transferase E3B)	protein polyubiquitination [GO:0000209]; regulation of postsynapse assembly [GO:0150052]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN004209	Chromosome_1A	1449	1	18	41.61490683229814	0.2869306930693069	80.66666666666667	18	1	80.66666666666667	18	1	NA	NA	NA	60.07428040854224	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004210	Chromosome_1A	3591	6	35	35.67251461988304	0.31666666666666665	90.46114971572963	35	1	94.07894736842105	13	1	88.2051282051282	22	1	93.53251318101933	35	1	methylated (>=50%)	Q9VF27	NADH dehydrogenase (ubiquinone) 23 kDa subunit (EC 7.1.1.2)	mitochondrial ATP synthesis coupled electron transport [GO:0042775]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN004211	Chromosome_1A	648	1	11	40.58641975308642	0.4148527528809219	83.15132605304213	11	1	83.15132605304213	11	1	NA	NA	NA	82.9712272460364	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003370	Chromosome_1A	33836	13	376	34.84454427237262	0.36800336603401285	64.50386860323063	374	0.6737967914438503	57.479156449239824	39	0.5897435897435898	65.21782474329578	335	0.6835820895522388	64.11275749909649	59	0.6101694915254238	methylated (>=50%)	Q86TD4	Sarcalumenin	store-operated calcium entry [GO:0002115]	hit with GO BP
GN004212	Chromosome_1A	42074	13	496	35.15710414983125	0.38222178460268885	84.13123203488948	479	0.9624217118997912	87.23181580324437	33	1	83.92227394554945	446	0.9596412556053812	59.77742448330684	11	0.7272727272727273	methylated (>=50%)	Q9VR07	Sodium- and chloride-dependent GABA transporter ine (Protein inebriated) (Protein receptor oscillation A)	glial cell growth [GO:0042065]; glycine import across plasma membrane [GO:1903804]; multicellular organismal-level water homeostasis [GO:0050891]; neurotransmitter transport [GO:0006836]; perineurial glial growth [GO:0042066]; regulation of response to osmotic stress [GO:0047484]; response to water deprivation [GO:0009414]; sodium ion transmembrane transport [GO:0035725]; transmission of nerve impulse [GO:0019226]	hit with GO BP
GN004213	Chromosome_1A	756	1	0	37.03703703703704	0	NA	0	NA	NA	NA	NA	NA	NA	NA	39.31104356636271	11	0.2727272727272727	NA	NA	NA	NA	no Swiss-Prot hit
GN003366	Chromosome_1A	342	1	0	35.380116959064324	0	NA	0	NA	NA	NA	NA	NA	NA	NA	37.142857142857146	5	0.4	NA	NA	NA	NA	no Swiss-Prot hit
GN004214	Chromosome_1A	540	1	1	36.666666666666664	0.05555555555555555	NA	0	NA	NA	NA	NA	NA	NA	NA	34.387351778656125	3	0.3333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN004215	Chromosome_1A	285	1	0	36.49122807017544	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004216	Chromosome_1A	507	1	0	35.50295857988166	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004217	Chromosome_1A	540	1	1	36.666666666666664	0.05555555555555555	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004218	Chromosome_1A	285	1	0	36.49122807017544	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004219	Chromosome_1A	1299	1	0	36.72055427251732	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004220	Chromosome_1A	531	1	0	36.534839924670436	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004221	Chromosome_1A	1860	1	0	37.68817204301075	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003367	Chromosome_1A	511	1	0	36.59491193737769	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004222	Chromosome_1A	564	1	1	36.87943262411348	0.05263157894736842	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004223	Chromosome_1A	285	1	0	36.49122807017544	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004224	Chromosome_1A	1299	1	0	36.72055427251732	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004225	Chromosome_1A	507	1	0	36.29191321499014	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004226	Chromosome_1A	1860	1	0	37.634408602150536	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004227	Chromosome_1A	495	1	0	36.96969696969697	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003364	Chromosome_1A	795	1	7	41.63522012578616	0.20339912280701755	81.04956268221575	7	1	81.04956268221575	7	1	NA	NA	NA	84.7488038277512	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003363	Chromosome_1A	231	1	13	55.41125541125541	0.7338709677419355	0.7633587786259542	8	0	0.7633587786259542	8	0	NA	NA	NA	15.287569573283859	45	0.15555555555555556	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003362	Chromosome_1A	3125	3	35	34.976	0.367516111906346	65.92207792207792	34	0.7941176470588235	54.26136363636363	5	0.6	68.53146853146853	29	0.8275862068965517	0.8715862870424173	30	0	methylated (>=50%)	Q61666	Protein HIRA (TUP1-like enhancer of split protein 1)	gastrulation [GO:0007369]; muscle cell differentiation [GO:0042692]; osteoblast differentiation [GO:0001649]; regulation of DNA-templated transcription [GO:0006355]; transcription elongation-coupled chromatin remodeling [GO:0140673]	hit with GO BP
GN003361	Chromosome_1A	453	1	2	44.81236203090508	0.13398402839396628	75.81699346405229	2	1	75.81699346405229	2	1	NA	NA	NA	89.61463096015676	42	0.9761904761904762	NA	NA	NA	NA	no Swiss-Prot hit
GN003360	Chromosome_1A	1852	2	43	34.71922246220302	0.7720257484101132	86.78032420346563	43	1	93.39622641509433	4	1	86.36363636363636	39	1	78.45439650464228	37	0.918918918918919	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003359	Chromosome_1A	1776	3	16	32.939189189189186	0.34036844500874397	83.17843866171003	16	1	90.86021505376344	4	1	81.57303370786516	12	1	85.91800356506239	11	1	methylated (>=50%)	O42611	Protein HIRA (TUP1-like enhancer of split protein 1)	chromatin remodeling [GO:0006338]; DNA-templated transcription [GO:0006351]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN003358	Chromosome_1A	13933	14	194	34.88121725400129	0.4582039638427672	69.97779519331243	194	0.8505154639175257	91.39987445072191	35	1	67.49034186165173	159	0.8176100628930818	89.73774230330673	17	1	methylated (>=50%)	P79987	Protein HIRA (cHIRA) (TUP1-like enhancer of split protein 1)	chromatin remodeling [GO:0006338]; DNA-templated transcription [GO:0006351]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN004229	Chromosome_1A	2039	6	76	40.46101029916626	0.9111991814942434	0.5287508261731659	75	0	0.6488824801730353	40	0	0.42708968883465526	35	0	0.6194347657762292	48	0	unmethylated (<10%)	Q9UA35	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (hfCNT)	purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]	hit with GO BP
GN004230	Chromosome_1A	13898	9	429	37.81839113541517	0.865544649664626	1.972375043895587	428	0	0.5647058823529412	66	0	2.1723146848472696	362	0	0.9285530049006964	66	0	unmethylated (<10%)	Q9UA35	Solute carrier family 28 member 3 (Concentrative Na(+)-nucleoside cotransporter 3) (hfCNT)	purine nucleoside transmembrane transport [GO:0015860]; pyrimidine nucleoside transport [GO:0015864]	hit with GO BP
GN004231	Chromosome_1A	34749	18	572	36.84998129442574	0.4853106116364216	88.10182451123613	566	0.9876325088339223	90.09166302924487	43	1	87.94926711732816	523	0.9866156787762906	83.82608695652173	10	0.9	methylated (>=50%)	B0JZ65	Leucine-rich repeat and WD repeat-containing protein 1 (ORC-associated protein) (ORCA) (Origin recognition complex-associated protein)	chromatin organization [GO:0006325]; establishment of protein localization to chromatin [GO:0071169]	hit with GO BP
GN004232	Chromosome_1A	2219	5	54	36.36773321315908	0.7360681114551083	2.0993136859103756	54	0	0.875	20	0	2.6833631484794274	34	0	1.8494055482166447	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004233	Chromosome_1A	423	1	10	45.8628841607565	0.45347341337907376	87.93650793650794	10	1	87.93650793650794	10	1	NA	NA	NA	82.85065303804656	30	0.9333333333333333	methylated (>=50%)	Q9NXW9	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 (Alkylated DNA repair protein alkB homolog 4) (DNA N6-methyl adenine demethylase ALKBH4) (EC 1.14.11.51) (Lysine-specific demethylase ALKBH4) (EC 1.14.11.-)	actomyosin structure organization [GO:0031032]; cleavage furrow ingression [GO:0036090]; demethylation [GO:0070988]; positive regulation of gene expression, epigenetic [GO:0141137]	hit with GO BP
GN004234	Chromosome_1A	822	1	35	41.72749391727494	0.9818442427138079	1.1221122112211221	35	0	1.1221122112211221	35	0	NA	NA	NA	0.9821428571428571	45	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004235	Chromosome_1A	873	1	41	45.36082474226804	0.9133663366336634	1.4393939393939394	41	0	1.4393939393939394	41	0	NA	NA	NA	0.48971596474045054	50	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004236	Chromosome_1A	384	1	13	47.65625	0.5984176456485255	0	13	0	0	13	0	NA	NA	NA	0.99113197704747	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004237	Chromosome_1A	447	1	18	44.742729306487696	0.8127272727272727	0.21929824561403508	18	0	0.21929824561403508	18	0	NA	NA	NA	0.6979695431472082	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004238	Chromosome_1A	807	1	45	51.54894671623296	0.8457149510945505	0.72840790842872	45	0	0.72840790842872	45	0	NA	NA	NA	0.5792304509722797	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004239	Chromosome_1A	1164	1	46	43.213058419243985	0.8539712918660287	0.8136094674556213	46	0	0.8136094674556213	46	0	NA	NA	NA	0.35294117647058826	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004240	Chromosome_1A	29858	18	375	34.30236452542032	0.4279834903316459	87.20846720846721	364	0.9752747252747253	91.72954149738828	74	0.9864864864864865	86.53135729497153	290	0.9724137931034482	92.38095238095238	32	0.96875	methylated (>=50%)	Q9UMZ2	Synergin gamma (AP1 subunit gamma-binding protein 1) (Gamma-synergin)	intracellular protein transport [GO:0006886]	hit with GO BP
GN004241	Chromosome_1A	3557	4	37	38.57183019398369	0.2796698591333802	1.3601036269430051	37	0	0.6593406593406593	23	0	2.365930599369085	14	0	0.6828851899274434	71	0	unmethylated (<10%)	P42577	Soma ferritin (EC 1.16.3.1)	intracellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]	hit with GO BP
GN016251	Chromosome_1A	469	1	9	41.36460554371002	0.46461199779856904	1.465201465201465	9	0	1.465201465201465	9	0	NA	NA	NA	0.930460333006856	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003348	Chromosome_1A	5531	11	152	37.49774001084795	0.7828405149335382	0.7195240071952401	152	0	0.5510534846029174	71	0	0.8450024142926122	81	0	2.5009769441187966	69	0	unmethylated (<10%)	O88627	Sodium/nucleoside cotransporter 2 (Concentrative nucleoside transporter 2) (CNT 2) (Na(+)/nucleoside cotransporter 2) (Sodium-coupled nucleoside transporter 2) (Sodium/purine nucleoside cotransporter) (SPNT) (Solute carrier family 28 member 2)	adenosine transport [GO:0032238]; inosine transport [GO:0035340]; neurotransmitter transport [GO:0006836]; nucleoside transmembrane transport [GO:1901642]; purine nucleobase transmembrane transport [GO:1904823]; purine nucleoside transmembrane transport [GO:0015860]; pyrimidine-containing compound transmembrane transport [GO:0072531]; retina homeostasis [GO:0001895]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN004242	Chromosome_1A	11498	5	356	36.99773873717168	0.9047881876972937	3.408071748878924	353	0	2.07636811543199	194	0	4.170444242973708	159	0	9.190371991247265	48	0	unmethylated (<10%)	Q99501	GAS2-like protein 1 (GAS2-related protein on chromosome 22) (Growth arrest-specific protein 2-like 1)	actin crosslink formation [GO:0051764]; cellular response to starvation [GO:0009267]; microtubule bundle formation [GO:0001578]; negative regulation of microtubule depolymerization [GO:0007026]; protein localization to microtubule plus-end [GO:1904825]; regulation of microtubule polymerization or depolymerization [GO:0031110]	hit with GO BP
GN004243	Chromosome_1A	624	1	29	49.67948717948718	0.7647058823529411	1.0291595197255574	29	0	1.0291595197255574	29	0	NA	NA	NA	0.4627981488074048	55	0	unmethylated (<10%)	A0A1L8HFX9	GAS2-like protein 2A (growth arrest specific 2 like 2 A)	actin crosslink formation [GO:0051764]; microtubule bundle formation [GO:0001578]; protein localization to microtubule plus-end [GO:1904825]; regulation of cilium beat frequency involved in ciliary motility [GO:0060296]; regulation of microtubule polymerization or depolymerization [GO:0031110]	hit with GO BP
GN003346	Chromosome_1A	728	2	14	37.08791208791209	0.5597232137953759	0.9269988412514485	14	0	0.9230769230769231	7	0	0.929368029739777	7	0	0.4798464491362764	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004244	Chromosome_1A	1053	2	21	33.42830009496676	0.7153532608695652	0.8110300081103001	21	0	0.4132231404958678	10	0	1.0680907877169559	11	0	2.0065075921908893	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004245	Chromosome_1A	2227	3	27	36.32689717108217	0.3834415294552782	1.5452538631346577	27	0	1.5761821366024518	24	0	1.3824884792626728	3	0	1.160261058738216	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004246	Chromosome_1A	660	1	25	43.93939393939394	0.7853776952734542	1.4527845036319613	25	0	1.4527845036319613	25	0	NA	NA	NA	0.6918573709419904	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003343	Chromosome_1A	9604	9	252	35.79758433985839	0.8194325612481662	1.343716597953886	252	0	0.39215686274509803	37	0	1.4938566251215415	215	0	0.6323396567299007	53	0	unmethylated (<10%)	A4FUP9	Glycosyltransferase 1 domain-containing protein 1 (EC 2.4.-.-)	NA	hit, no GO BP
GN003342	Chromosome_1A	2001	2	68	37.78110944527736	0.9527237081641227	0.6318006318006318	68	0	0.7608178792201616	55	0	0.2680965147453083	13	0	0.7647598654022637	76	0	unmethylated (<10%)	Q96PB7	Noelin-3 (Olfactomedin-3) (Optimedin)	eye photoreceptor cell development [GO:0042462]; signal transduction [GO:0007165]	hit with GO BP
GN003341	Chromosome_1A	9431	4	298	37.472166260205704	0.9047949880237979	0.6607390488620605	298	0	0.5573248407643312	24	0	0.6725438516768154	274	0	0.3735699276208265	60	0	unmethylated (<10%)	Q57951	Universal stress protein MJ0531 (USP MJ0531)	NA	hit, no GO BP
GN004248	Chromosome_1A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004249	Chromosome_1A	321	1	12	45.17133956386293	0.7838827838827839	0.2145922746781116	12	0	0.2145922746781116	12	0	NA	NA	NA	0.6306661411115491	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004250	Chromosome_1A	573	1	16	44.85165794066317	0.5562431743720422	0.2857142857142857	16	0	0.2857142857142857	16	0	NA	NA	NA	0.8746355685131195	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004251	Chromosome_1A	498	1	18	49.397590361445786	0.596446869385854	79.77941176470588	14	1	79.77941176470588	14	1	NA	NA	NA	72.8744939271255	13	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004252	Chromosome_1A	159	1	1	47.16981132075472	0.11777777777777777	76.47058823529412	1	1	76.47058823529412	1	1	NA	NA	NA	85.51724137931035	34	0.8529411764705882	NA	NA	NA	NA	no Swiss-Prot hit
GN004253	Chromosome_1A	870	1	23	38.160919540229884	0.7329670329670329	0.4784688995215311	23	0	0.4784688995215311	23	0	NA	NA	NA	8.410306271268839	40	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN003312	Chromosome_1A	1862	2	40	36.89581095596133	0.6314540059347181	0.8600237247924081	40	0	0.8891928864569083	17	0	0.837696335078534	23	0	1.056338028169014	48	0	unmethylated (<10%)	Q28J92	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN004636	Chromosome_1A	325	2	3	49.84615384615385	0.1486960500228763	0	3	0	0	3	0	NA	NA	NA	4.938659955960994	85	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003313	Chromosome_1A	603	1	21	43.946932006633496	0.7326429067345522	0.351493848857645	21	0	0.351493848857645	21	0	NA	NA	NA	0.6285714285714286	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004255	Chromosome_1A	873	1	25	48.45360824742268	0.4883642873125979	0.7070707070707071	25	0	0.7070707070707071	25	0	NA	NA	NA	1.0869565217391304	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004256	Chromosome_1A	603	1	20	42.95190713101161	0.7209469153515065	0	20	0	0	20	0	NA	NA	NA	0.8175779253960143	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004257	Chromosome_1A	2663	3	35	38.79083740142696	0.3493886027454773	88.86198547215497	35	1	92.41126070991432	27	1	81.99052132701422	8	1	1.781296387926769	43	0.023255813953488372	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003317	Chromosome_1A	9760	6	224	35.4405737704918	0.7342871076563027	58.265109828658346	217	0.8755760368663594	42.36149972020146	17	0.7058823529411765	59.64699017796363	200	0.89	2.874516307352128	39	0	methylated (>=50%)	Q6GNG8	PRKR-interacting protein 1 homolog	NA	hit, no GO BP
GN003318	Chromosome_1A	40392	9	541	35.108437314319666	0.43705902725525675	54.71259855399614	450	0.6755555555555556	60.750507099391484	23	0.9130434782608695	54.296205630354955	427	0.6627634660421545	0.7932446264073695	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003319	Chromosome_1A	1592	5	18	36.99748743718593	0.33090833506547496	1.823949246629659	18	0	1.7796610169491525	17	0	2.4691358024691357	1	0	0.4106374657802112	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004259	Chromosome_1A	663	1	30	43.58974358974359	0.9531339850488787	0.46382189239332094	30	0	0.46382189239332094	30	0	NA	NA	NA	1.3260025873221215	30	0	unmethylated (<10%)	Q21268	UPF0046 protein K07C11.7	NA	hit, no GO BP
GN004260	Chromosome_1A	1570	2	46	37.70700636942675	0.825041412006626	0.6264682850430697	46	0	0.602130616025938	43	0	0.759493670886076	3	0	0.5131300935707818	41	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004261	Chromosome_1A	1819	2	66	40.46179219351292	0.8865307930881702	0.5564830272676683	66	0	0.608044901777362	46	0	0.4807692307692308	20	0	0.584349593495935	45	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004262	Chromosome_1A	1819	2	67	40.5717427157779	0.8951705901795879	0.5483207676490747	67	0	0.5649717514124294	47	0	0.5037783375314862	20	0	0.6736728644570197	52	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004263	Chromosome_1A	468	1	15	41.452991452991455	0.7558139534883721	0.8368200836820083	12	0	0.8368200836820083	12	0	NA	NA	NA	0.3821281599059377	43	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN004264	Chromosome_1A	690	1	32	43.768115942028984	0.968421052631579	0.25806451612903225	32	0	0.25806451612903225	32	0	NA	NA	NA	0.5736823234134099	41	0	unmethylated (<10%)	Q21268	UPF0046 protein K07C11.7	NA	hit, no GO BP
GN003326	Chromosome_1A	2388	5	79	39.824120603015075	0.8356381612168783	0.47748976807639837	79	0	0.47534165181224003	47	0	0.4803843074459568	32	0	0.7809449433814916	43	0	unmethylated (<10%)	Q20191	Zinc metalloproteinase nas-13 (EC 3.4.24.-) (Nematode astacin 13)	proteolysis [GO:0006508]	hit with GO BP
GN003327	Chromosome_1A	7510	4	122	34.647137150466044	0.542386888281514	81.67264697764284	121	0.8677685950413223	73.31887201735358	7	0.7142857142857143	82.24023581429624	114	0.8771929824561403	0.8797653958944281	48	0	methylated (>=50%)	Q96DF8	Splicing factor ESS-2 homolog (DiGeorge syndrome critical region 13) (DiGeorge syndrome critical region 14) (DiGeorge syndrome protein H) (DGS-H) (Protein ES2)	mRNA splicing, via spliceosome [GO:0000398]; nervous system development [GO:0007399]	hit with GO BP
GN003328	Chromosome_1A	7126	5	119	38.47880999158013	0.4554327931117451	77.45831692267296	111	0.9369369369369369	70.93153759820426	19	0.8947368421052632	78.32292595896521	92	0.9456521739130435	NA	NA	NA	methylated (>=50%)	Q96DF8	Splicing factor ESS-2 homolog (DiGeorge syndrome critical region 13) (DiGeorge syndrome critical region 14) (DiGeorge syndrome protein H) (DGS-H) (Protein ES2)	mRNA splicing, via spliceosome [GO:0000398]; nervous system development [GO:0007399]	hit with GO BP
GN004266	Chromosome_1A	8763	9	178	34.75978546159991	0.6750416433511505	2.5100500049024412	177	0	2.657667158827252	87	0	2.3818248442652985	90	0	1.6432626232446967	52	0	unmethylated (<10%)	Q7SYB5	Differentially expressed in FDCP 6 homolog	cell migration involved in gastrulation [GO:0042074]; convergent extension [GO:0060026]; convergent extension involved in gastrulation [GO:0060027]	hit with GO BP
GN004267	Chromosome_1A	3761	3	95	35.04387131082159	0.8236456222611037	0.7952691680261011	94	0	1.2	38	0	0.6568144499178982	56	0	1.3785180930499712	57	0	unmethylated (<10%)	Q4V7W8	Electron transfer flavoprotein beta subunit lysine methyltransferase (EC 2.1.1.-) (ETFB lysine methyltransferase) (ETFB-KMT) (Protein N-lysine methyltransferase METTL20)	negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:1904736]	hit with GO BP
GN004268	Chromosome_1A	828	1	36	45.531400966183575	0.8461931527848748	0.4824259131633356	36	0	0.4824259131633356	36	0	NA	NA	NA	0.5454545454545454	33	0	unmethylated (<10%)	Q5FWL3	E3 ubiquitin-protein ligase NRDP1 (EC 2.3.2.27) (RING finger protein 41) (RING-type E3 ubiquitin transferase NRDP1)	extrinsic apoptotic signaling pathway [GO:0097191]; protein polyubiquitination [GO:0000209]; regulation of canonical NF-kappaB signal transduction [GO:0043122]	hit with GO BP
GN004269	Chromosome_1A	3345	3	84	35.7847533632287	0.7844177307776059	0.6324666198172875	84	0	0.6397952655150352	36	0	0.6282335550628233	48	0	0.6743355811186037	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004270	Chromosome_1A	8944	6	270	35.37567084078712	0.9650255754475703	0.6302365240602061	251	0	0.7560483870967742	49	0	0.6085369034165	202	0	0.5251066622907778	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004271	Chromosome_1A	6345	10	176	35.69739952718676	0.871654373024236	0.6533385600418137	175	0	0.6340579710144928	73	0	0.6680488366735775	102	0	1.0118632240055827	56	0	unmethylated (<10%)	Q9NRA2	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Membrane glycoprotein HP59) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	carbohydrate derivative transport [GO:1901264]; monoatomic anion transport [GO:0006820]; neurotransmitter loading into synaptic vesicle [GO:0098700]; sialic acid transport [GO:0015739]	hit with GO BP
GN004272	Chromosome_1A	4283	3	156	39.761849171141726	0.9219522291675291	0.8573469873779471	101	0	0.8084577114427861	31	0	0.8876881512929371	70	0	0.5022321428571429	64	0	unmethylated (<10%)	Q5Q0U0	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Solute carrier family 17 (Anion/sugar transporter), member 5) (Vesicular excitatory amino acid transporter) (VEAT)	neurotransmitter loading into synaptic vesicle [GO:0098700]; response to bacterium [GO:0009617]; sialic acid transport [GO:0015739]	hit with GO BP
GN004273	Chromosome_1A	10213	11	279	36.09125624204445	0.8398135769459298	0.6692296739285206	278	0	0.6486244687989264	83	0	0.6788511749347258	195	0	0.5315379163713678	60	0	unmethylated (<10%)	Q03567	Uncharacterized transporter slc-17.2	NA	hit, no GO BP
GN004274	Chromosome_1A	4542	11	117	37.97886393659181	0.7162628078811094	0.6109613656783468	117	0	0.5239259517988124	65	0	0.7031828275351591	52	0	0.45129748025573524	39	0	unmethylated (<10%)	Q9NRA2	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Membrane glycoprotein HP59) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	carbohydrate derivative transport [GO:1901264]; monoatomic anion transport [GO:0006820]; neurotransmitter loading into synaptic vesicle [GO:0098700]; sialic acid transport [GO:0015739]	hit with GO BP
GN004275	Chromosome_1A	24282	21	305	35.05889135985504	0.4125138233162123	78.43125154282893	283	0.8692579505300353	85.84960652870883	133	0.9774436090225563	72.98223078569899	150	0.7733333333333333	40.45454545454545	20	0.35	methylated (>=50%)	Q96DR7	Rho guanine nucleotide exchange factor 26 (SH3 domain-containing guanine exchange factor)	regulation of actin cytoskeleton organization [GO:0032956]	hit with GO BP
GN004276	Chromosome_1A	1551	4	50	41.52159896840748	0.756378745318352	11.751152073732719	50	0.02	4.587155963302752	33	0	21.05960264900662	17	0.058823529411764705	1.4180024660912454	47	0	sparse (10-50%)	P06734	Low affinity immunoglobulin epsilon Fc receptor (BLAST-2) (C-type lectin domain family 4 member J) (Fc-epsilon-RII) (Immunoglobulin E-binding factor) (Lymphocyte IgE receptor) (CD antigen CD23) [Cleaved into: Low affinity immunoglobulin epsilon Fc receptor membrane-bound form; Low affinity immunoglobulin epsilon Fc receptor soluble form]	B cell antigen processing and presentation [GO:0002450]; defense response to bacterium [GO:0042742]; Fc receptor-mediated immune complex endocytosis [GO:0160006]; Fc-gamma receptor signaling pathway involved in phagocytosis [GO:0038096]; immune response [GO:0006955]; macrophage activation [GO:0042116]; positive regulation of gene expression [GO:0010628]	hit with GO BP
GN003305	Chromosome_1A	213	1	5	49.29577464788732	0.3867102396514161	93.9622641509434	5	1	93.9622641509434	5	1	NA	NA	NA	89.85059247810408	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003304	Chromosome_1A	1311	1	32	46.7581998474447	0.4473162305674621	0.40816326530612246	25	0	0.40816326530612246	25	0	NA	NA	NA	1.4967259120673526	32	0	unmethylated (<10%)	P58197	Transcription factor AP-2-alpha (AP2-alpha) (AP-2 transcription factor) (Activating enhancer-binding protein 2-alpha) (Activator protein 2) (AP-2)	anterior neuropore closure [GO:0021506]; basement membrane organization [GO:0071711]; bone morphogenesis [GO:0060349]; cellular response to iron ion [GO:0071281]; cornea development in camera-type eye [GO:0061303]; embryonic body morphogenesis [GO:0010172]; embryonic camera-type eye morphogenesis [GO:0048596]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic forelimb morphogenesis [GO:0035115]; embryonic pattern specification [GO:0009880]; epidermis morphogenesis [GO:0048730]; eyelid development in camera-type eye [GO:0061029]; face morphogenesis [GO:0060325]; forebrain neuron development [GO:0021884]; forelimb morphogenesis [GO:0035136]; inner ear morphogenesis [GO:0042472]; keratinocyte development [GO:0003334]; kidney development [GO:0001822]; lens induction in camera-type eye [GO:0060235]; lens morphogenesis in camera-type eye [GO:0002089]; metanephric nephron development [GO:0072210]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; neural crest cell development [GO:0014032]; neural tube closure [GO:0001843]; oculomotor nerve formation [GO:0021623]; optic cup structural organization [GO:0003409]; optic vesicle morphogenesis [GO:0003404]; outflow tract morphogenesis [GO:0003151]; positive regulation of bone mineralization [GO:0030501]; positive regulation of cell migration [GO:0030335]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of tooth mineralization [GO:0070172]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; regulation of neuron differentiation [GO:0045664]; regulation of transcription by RNA polymerase II [GO:0006357]; response to lipopolysaccharide [GO:0032496]; retina layer formation [GO:0010842]; roof of mouth development [GO:0060021]; Schwann cell development [GO:0014044]; sensory organ development [GO:0007423]; sensory perception of sound [GO:0007605]; skeletal system development [GO:0001501]; skeletal system morphogenesis [GO:0048705]; skin development [GO:0043588]; sympathetic nervous system development [GO:0048485]; trigeminal nerve development [GO:0021559]	hit with GO BP
GN003303	Chromosome_1A	2028	1	66	46.99211045364891	0.5940087871122354	95.43478260869566	66	1	95.43478260869566	66	1	NA	NA	NA	81.27584170112227	30	0.8333333333333334	methylated (>=50%)	A4IF63	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN004279	Chromosome_1A	1124	2	11	47.59786476868327	0.17391059723746027	80.1948051948052	11	0.9090909090909091	83.26848249027238	10	0.9	64.70588235294117	1	1	94.98432601880877	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003297	Chromosome_1A	5093	6	60	36.89377577066562	0.35079623098964074	77.54312908982749	59	0.8983050847457628	89.12732474964234	25	1	69.29735234215886	34	0.8235294117647058	86.159169550173	11	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003298	Chromosome_1A	20879	8	191	37.59279658987499	0.26171938936568034	82.64025107885445	179	0.9608938547486033	84.863523573201	26	0.9615384615384616	82.34115945254256	153	0.9607843137254902	19.52887537993921	36	0.2777777777777778	methylated (>=50%)	Q0P5H9	Tetratricopeptide repeat protein 5 (TPR repeat protein 5) (Stress-responsive activator of p300) (Protein Strap)	cellular response to starvation [GO:0009267]; DNA damage response [GO:0006974]; positive regulation of RNA metabolic process [GO:0051254]; regulation of gene expression [GO:0010468]	hit with GO BP
GN004281	Chromosome_1A	8363	6	230	36.45820877675475	0.8277133734390195	1.8230277185501067	230	0	0.5458515283842795	37	0	2.133015368309486	193	0	0.42283298097251587	52	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN003294	Chromosome_1A	408	1	15	46.81372549019608	0.6719367588932806	0.6504065040650406	15	0	0.6504065040650406	15	0	NA	NA	NA	0.8235666772252138	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004282	Chromosome_1A	5424	5	55	41.02138643067847	0.24309986554210977	54.57951706910907	54	0.6851851851851852	48.43276036400405	22	0.7727272727272727	58.881811748053785	32	0.625	63.2162076606521	41	0.6097560975609756	methylated (>=50%)	Q6ZMY6	WD repeat-containing protein 88 (PQQ repeat and WD repeat-containing protein)	NA	hit, no GO BP
GN004283	Chromosome_1A	4087	6	50	37.411304135062394	0.35472011220507976	91.02509570395577	50	1	92.03539823008849	17	1	90.78462348604529	33	1	88.99876390605687	23	1	methylated (>=50%)	Q6ZQ89	E3 ubiquitin-protein ligase MARCHF6 (EC 2.3.2.27) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING-type E3 ubiquitin transferase MARCHF6)	negative regulation of cholesterol biosynthetic process [GO:0045541]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]	hit with GO BP
GN004284	Chromosome_1A	288	1	7	53.81944444444444	0.3419267299864315	96.73202614379085	6	1	96.73202614379085	6	1	NA	NA	NA	77.34724292101342	32	0.96875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004285	Chromosome_1A	438	1	21	42.465753424657535	1.0814814814814815	0.8342022940563086	21	0	0.8342022940563086	21	0	NA	NA	NA	1.4760147601476015	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004286	Chromosome_1A	582	1	36	50.34364261168385	0.9887682869277962	0.7359705611775529	36	0	0.7359705611775529	36	0	NA	NA	NA	1.4393420150788212	65	0	unmethylated (<10%)	P48148	Ras-like GTP-binding protein Rho1 (EC 3.6.5.2)	actin cytoskeleton organization [GO:0030036]; actin filament bundle assembly [GO:0051017]; actin filament organization [GO:0007015]; actin-mediated cell contraction [GO:0070252]; adherens junction maintenance [GO:0034334]; apical constriction [GO:0003383]; axon guidance [GO:0007411]; border follicle cell migration [GO:0007298]; cell elongation involved in imaginal disc-derived wing morphogenesis [GO:0090254]; cell migration [GO:0016477]; cell projection organization [GO:0030030]; cellularization [GO:0007349]; compound eye morphogenesis [GO:0001745]; cortical actin cytoskeleton organization [GO:0030866]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; determination of left/right symmetry [GO:0007368]; dorsal closure [GO:0007391]; dorsal closure, leading edge cell differentiation [GO:0046663]; dorsal closure, spreading of leading edge cells [GO:0007395]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; establishment of planar polarity of embryonic epithelium [GO:0042249]; establishment of protein localization [GO:0045184]; establishment or maintenance of actin cytoskeleton polarity [GO:0030950]; gastrulation involving germ band extension [GO:0010004]; germ-band extension [GO:0007377]; glial cell migration [GO:0008347]; hemocyte migration [GO:0035099]; imaginal disc-derived leg morphogenesis [GO:0007480]; imaginal disc-derived wing hair organization [GO:0035317]; lumen formation, open tracheal system [GO:0035149]; maintenance of epithelial cell apical/basal polarity [GO:0045199]; melanization defense response [GO:0035006]; mitotic actomyosin contractile ring assembly [GO:1903475]; mitotic cytokinesis [GO:0000281]; mitotic cytokinesis, division site positioning [GO:1902408]; motor neuron axon guidance [GO:0008045]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; neuroblast proliferation [GO:0007405]; neuron projection morphogenesis [GO:0048812]; open tracheal system development [GO:0007424]; peripheral nervous system development [GO:0007422]; positive regulation of protein serine/threonine kinase activity [GO:0071902]; positive regulation of wound healing [GO:0090303]; posterior midgut invagination [GO:0007374]; protein localization involved in establishment of planar polarity [GO:0090251]; protein localization to adherens junction [GO:0071896]; pseudocleavage involved in syncytial blastoderm formation [GO:0030589]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of actomyosin structure organization [GO:0110020]; regulation of axonogenesis [GO:0050770]; regulation of cell migration [GO:0030334]; regulation of cytoskeleton organization [GO:0051493]; regulation of embryonic cell shape [GO:0016476]; regulation of filopodium assembly [GO:0051489]; regulation of locomotor rhythm [GO:1904059]; regulation of Malpighian tubule size [GO:0035298]; regulation of myoblast fusion [GO:1901739]; regulation of tube length, open tracheal system [GO:0035159]; response to wounding [GO:0009611]; salivary gland morphogenesis [GO:0007435]; small GTPase-mediated signal transduction [GO:0007264]; spiracle morphogenesis, open tracheal system [GO:0035277]; tracheal pit formation in open tracheal system [GO:0035202]; ventral furrow formation [GO:0007370]; wound healing [GO:0042060]	hit with GO BP
GN004287	Chromosome_1A	582	1	33	49.312714776632305	0.9436910377358491	6.350184956843403	33	0	6.350184956843403	33	0	NA	NA	NA	0.6565988181221274	26	0	unmethylated (<10%)	P48148	Ras-like GTP-binding protein Rho1 (EC 3.6.5.2)	actin cytoskeleton organization [GO:0030036]; actin filament bundle assembly [GO:0051017]; actin filament organization [GO:0007015]; actin-mediated cell contraction [GO:0070252]; adherens junction maintenance [GO:0034334]; apical constriction [GO:0003383]; axon guidance [GO:0007411]; border follicle cell migration [GO:0007298]; cell elongation involved in imaginal disc-derived wing morphogenesis [GO:0090254]; cell migration [GO:0016477]; cell projection organization [GO:0030030]; cellularization [GO:0007349]; compound eye morphogenesis [GO:0001745]; cortical actin cytoskeleton organization [GO:0030866]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; determination of left/right symmetry [GO:0007368]; dorsal closure [GO:0007391]; dorsal closure, leading edge cell differentiation [GO:0046663]; dorsal closure, spreading of leading edge cells [GO:0007395]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; establishment of planar polarity of embryonic epithelium [GO:0042249]; establishment of protein localization [GO:0045184]; establishment or maintenance of actin cytoskeleton polarity [GO:0030950]; gastrulation involving germ band extension [GO:0010004]; germ-band extension [GO:0007377]; glial cell migration [GO:0008347]; hemocyte migration [GO:0035099]; imaginal disc-derived leg morphogenesis [GO:0007480]; imaginal disc-derived wing hair organization [GO:0035317]; lumen formation, open tracheal system [GO:0035149]; maintenance of epithelial cell apical/basal polarity [GO:0045199]; melanization defense response [GO:0035006]; mitotic actomyosin contractile ring assembly [GO:1903475]; mitotic cytokinesis [GO:0000281]; mitotic cytokinesis, division site positioning [GO:1902408]; motor neuron axon guidance [GO:0008045]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; neuroblast proliferation [GO:0007405]; neuron projection morphogenesis [GO:0048812]; open tracheal system development [GO:0007424]; peripheral nervous system development [GO:0007422]; positive regulation of protein serine/threonine kinase activity [GO:0071902]; positive regulation of wound healing [GO:0090303]; posterior midgut invagination [GO:0007374]; protein localization involved in establishment of planar polarity [GO:0090251]; protein localization to adherens junction [GO:0071896]; pseudocleavage involved in syncytial blastoderm formation [GO:0030589]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of actomyosin structure organization [GO:0110020]; regulation of axonogenesis [GO:0050770]; regulation of cell migration [GO:0030334]; regulation of cytoskeleton organization [GO:0051493]; regulation of embryonic cell shape [GO:0016476]; regulation of filopodium assembly [GO:0051489]; regulation of locomotor rhythm [GO:1904059]; regulation of Malpighian tubule size [GO:0035298]; regulation of myoblast fusion [GO:1901739]; regulation of tube length, open tracheal system [GO:0035159]; response to wounding [GO:0009611]; salivary gland morphogenesis [GO:0007435]; small GTPase-mediated signal transduction [GO:0007264]; spiracle morphogenesis, open tracheal system [GO:0035277]; tracheal pit formation in open tracheal system [GO:0035202]; ventral furrow formation [GO:0007370]; wound healing [GO:0042060]	hit with GO BP
GN004288	Chromosome_1A	1606	3	32	43.46201743462017	0.42528963919232043	86.37295081967213	32	0.96875	84.0650406504065	23	0.9565217391304348	90.30470914127424	9	1	88.59390363815143	16	1	methylated (>=50%)	Q5XGP7	Src kinase-associated phosphoprotein 2-A	NA	hit, no GO BP
GN004289	Chromosome_1A	18137	13	315	37.62474499641617	0.4943183057031347	90.79827915869981	311	0.9807073954983923	89.22952803549819	65	0.9692307692307692	91.07105281616049	246	0.983739837398374	80.59701492537313	28	0.8928571428571429	methylated (>=50%)	E6ZIJ1	RanBP-type and C3HC4-type zinc finger-containing protein 1 (EC 2.3.2.31) (Heme-oxidized IRP2 ubiquitin ligase 1 homolog) (HOIL-1) (Heme-oxidized IRP2 ubiquitin transferase 1 homolog)	defense response to bacterium [GO:0042742]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein linear polyubiquitination [GO:0097039]	hit with GO BP
GN004290	Chromosome_1A	8216	6	119	36.38023369036027	0.437741715088036	75.91865357643759	119	0.865546218487395	68.51851851851852	13	0.9230769230769231	76.45996387718242	106	0.8584905660377359	0.6844626967830253	47	0	methylated (>=50%)	Q6PGU2	Repressor of RNA polymerase III transcription MAF1 homolog	negative regulation of transcription by RNA polymerase III [GO:0016480]	hit with GO BP
GN004291	Chromosome_1A	13383	12	194	35.89628633340806	0.45095959326647655	87.46997929606626	193	0.927461139896373	88.67612293144208	82	0.8536585365853658	86.81963033779478	111	0.9819819819819819	10.428360413589365	50	0.06	methylated (>=50%)	Q1RMU2	Ubiquitin carboxyl-terminal hydrolase CYLD (EC 3.4.19.12) (Deubiquitinating enzyme CYLD) (Ubiquitin thioesterase CYLD) (Ubiquitin-specific-processing protease CYLD)	innate immune response [GO:0045087]; necroptotic process [GO:0070266]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-18-mediated signaling pathway [GO:2000493]; negative regulation of JNK cascade [GO:0046329]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of p38MAPK cascade [GO:1903753]; protein deubiquitination [GO:0016579]; protein K63-linked deubiquitination [GO:0070536]; protein linear deubiquitination [GO:1990108]; regulation of cilium assembly [GO:1902017]; regulation of inflammatory response [GO:0050727]; regulation of intrinsic apoptotic signaling pathway [GO:2001242]; regulation of mitotic cell cycle [GO:0007346]; regulation of tumor necrosis factor-mediated signaling pathway [GO:0010803]	hit with GO BP
GN004292	Chromosome_1A	9689	8	111	35.74156259675921	0.35981568244868134	44.517236000623924	111	0.5315315315315315	79.63163596966415	24	0.9166666666666666	38.61151603498542	87	0.42528735632183906	21.441661576053757	33	0.21212121212121213	sparse (10-50%)	Q5ZJX5	MTOR-associated protein MEAK7 (MEAK7) (TBC/LysM-associated domain-containing protein 1) (TLD domain-containing protein 1)	positive regulation of protein localization to lysosome [GO:0150032]; regulation of cell migration [GO:0030334]; regulation of cell population proliferation [GO:0042127]; response to amino acid [GO:0043200]; response to insulin [GO:0032868]; response to nutrient levels [GO:0031667]; response to oxidative stress [GO:0006979]; TOR signaling [GO:0031929]	hit with GO BP
GN004293	Chromosome_1A	1311	1	32	46.98703279938978	0.443284481027906	89.08045977011494	29	0.9655172413793104	89.08045977011494	29	0.9655172413793104	NA	NA	NA	60.84905660377358	4	0.75	methylated (>=50%)	P58197	Transcription factor AP-2-alpha (AP2-alpha) (AP-2 transcription factor) (Activating enhancer-binding protein 2-alpha) (Activator protein 2) (AP-2)	anterior neuropore closure [GO:0021506]; basement membrane organization [GO:0071711]; bone morphogenesis [GO:0060349]; cellular response to iron ion [GO:0071281]; cornea development in camera-type eye [GO:0061303]; embryonic body morphogenesis [GO:0010172]; embryonic camera-type eye morphogenesis [GO:0048596]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic forelimb morphogenesis [GO:0035115]; embryonic pattern specification [GO:0009880]; epidermis morphogenesis [GO:0048730]; eyelid development in camera-type eye [GO:0061029]; face morphogenesis [GO:0060325]; forebrain neuron development [GO:0021884]; forelimb morphogenesis [GO:0035136]; inner ear morphogenesis [GO:0042472]; keratinocyte development [GO:0003334]; kidney development [GO:0001822]; lens induction in camera-type eye [GO:0060235]; lens morphogenesis in camera-type eye [GO:0002089]; metanephric nephron development [GO:0072210]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; neural crest cell development [GO:0014032]; neural tube closure [GO:0001843]; oculomotor nerve formation [GO:0021623]; optic cup structural organization [GO:0003409]; optic vesicle morphogenesis [GO:0003404]; outflow tract morphogenesis [GO:0003151]; positive regulation of bone mineralization [GO:0030501]; positive regulation of cell migration [GO:0030335]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of tooth mineralization [GO:0070172]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; regulation of neuron differentiation [GO:0045664]; regulation of transcription by RNA polymerase II [GO:0006357]; response to lipopolysaccharide [GO:0032496]; retina layer formation [GO:0010842]; roof of mouth development [GO:0060021]; Schwann cell development [GO:0014044]; sensory organ development [GO:0007423]; sensory perception of sound [GO:0007605]; skeletal system development [GO:0001501]; skeletal system morphogenesis [GO:0048705]; skin development [GO:0043588]; sympathetic nervous system development [GO:0048485]; trigeminal nerve development [GO:0021559]	hit with GO BP
GN004294	Chromosome_1A	7712	5	97	34.88070539419087	0.41421040974529344	80.87757313109425	95	0.8947368421052632	83.35949764521193	43	0.8837209302325582	79.56989247311827	52	0.9038461538461539	2.8356481481481484	30	0	methylated (>=50%)	Q8CA72	Gigaxonin	cytoskeleton organization [GO:0007010]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN004295	Chromosome_1A	12264	12	230	35.31474233529028	0.6199537219377708	93.6897152818129	229	1	96.07120933087783	33	1	93.44072909312624	196	1	93.30018319811568	49	1	methylated (>=50%)	Q6NSR8	Probable aminopeptidase NPEPL1 (EC 3.4.11.-) (Aminopeptidase-like 1)	proteolysis [GO:0006508]	hit with GO BP
GN004296	Chromosome_1A	783	1	0	45.593869731800766	0	NA	0	NA	NA	NA	NA	NA	NA	NA	95.52960128876359	36	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004297	Chromosome_1A	15767	8	142	34.07750364685736	0.3200748537877932	78.08186001453136	140	0.9214285714285714	82.88822947576656	22	0.9545454545454546	77.41134262453429	118	0.9152542372881356	64.89994591671173	24	0.6666666666666666	methylated (>=50%)	O60547	GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (GMD)	'de novo' GDP-L-fucose biosynthetic process [GO:0042351]; GDP-L-fucose biosynthetic process [GO:0042350]; GDP-mannose metabolic process [GO:0019673]; Notch signaling pathway [GO:0007219]	hit with GO BP
GN004298	Chromosome_1A	1158	1	54	45.854922279792746	0.8871045538374237	0.7623888182973316	49	0	0.7623888182973316	49	0	NA	NA	NA	0.3393665158371041	46	0	unmethylated (<10%)	Q64731	Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6)	anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; heart development [GO:0007507]; Peyer's patch morphogenesis [GO:0061146]; proteoglycan biosynthetic process [GO:0030166]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of Wnt signaling pathway [GO:0030111]; visceral mesoderm-endoderm interaction involved in midgut development [GO:0007495]	hit with GO BP
GN004299	Chromosome_1A	378	1	20	49.735449735449734	0.8559782608695652	0	20	0	0	20	0	NA	NA	NA	0.7011070110701108	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004300	Chromosome_1A	1509	1	73	48.972829688535455	0.8171399323482286	1.045510455104551	72	0	1.045510455104551	72	0	NA	NA	NA	0.622524052065648	70	0	unmethylated (<10%)	Q9PVZ3	Forkhead box protein C1-A (FoxC1) (Fork head domain-related protein 11) (XFD-11)	anatomical structure morphogenesis [GO:0009653]; cell adhesion [GO:0007155]; cell differentiation [GO:0030154]; cellular response to chemokine [GO:1990869]; chemokine-mediated signaling pathway [GO:0070098]; DNA-templated transcription [GO:0006351]; mesoderm development [GO:0007498]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pronephros development [GO:0048793]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004301	Chromosome_1A	912	1	29	42.87280701754386	0.6975787308118373	6.128550074738415	29	0	6.128550074738415	29	0	NA	NA	NA	0.7107023411371237	52	0	unmethylated (<10%)	Q8BLF1	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Acetylalkylglycerol acetylhydrolase) (2-acetyl MAGE hydrolase) (EC 3.1.1.71) (Arylacetamide deacetylase-like 1) (Chlorpyrifos oxon-binding protein) (CPO-BP)	ether lipid metabolic process [GO:0046485]; protein dephosphorylation [GO:0006470]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN004302	Chromosome_1A	6098	7	75	40.48868481469334	0.3254442080395073	94.04553415061297	73	1	91.2442396313364	21	1	94.87295825771325	52	1	91.25596184419715	35	1	methylated (>=50%)	Q9NPI1	Bromodomain-containing protein 7 (75 kDa bromodomain protein) (Protein CELTIX-1)	chromatin remodeling [GO:0006338]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; positive regulation of cell differentiation [GO:0045597]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of T cell differentiation [GO:0045582]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic cell cycle [GO:0007346]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN004303	Chromosome_1A	465	1	10	43.87096774193548	0.45821836815135986	0	9	0	0	9	0	NA	NA	NA	0.7618080243778568	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004304	Chromosome_1A	15050	6	272	35.48172757475083	0.5778003613369467	72.43620441951153	272	0.7757352941176471	76.69074195666448	39	0.7948717948717948	71.94134718191538	233	0.7725321888412017	0.7246376811594203	13	0	methylated (>=50%)	P00491	Purine nucleoside phosphorylase (PNP) (EC 2.4.2.1) (Inosine phosphorylase) (Inosine-guanosine phosphorylase)	allantoin metabolic process [GO:0000255]; dAMP catabolic process [GO:0046059]; deoxyadenosine catabolic process [GO:0006157]; deoxyguanosine catabolic process [GO:0006161]; deoxyinosine catabolic process [GO:0006149]; guanosine catabolic process [GO:0046115]; immune response [GO:0006955]; IMP catabolic process [GO:0006204]; inosine catabolic process [GO:0006148]; NAD+ biosynthetic process via the salvage pathway [GO:0034355]; nicotinamide riboside catabolic process [GO:0006738]; nucleobase-containing compound metabolic process [GO:0006139]; nucleotide biosynthetic process [GO:0009165]; positive regulation of alpha-beta T cell differentiation [GO:0046638]; positive regulation of interleukin-2 production [GO:0032743]; positive regulation of T cell proliferation [GO:0042102]; purine-containing compound salvage [GO:0043101]; response to xenobiotic stimulus [GO:0009410]; urate biosynthetic process [GO:0034418]	hit with GO BP
GN004305	Chromosome_1A	849	1	31	44.051825677267374	0.7589100346020762	87.30251609128145	31	0.9032258064516129	87.30251609128145	31	0.9032258064516129	NA	NA	NA	2.5811823480432974	33	0	methylated (>=50%)	Q3ZBH3	CD151 antigen (CD antigen CD151)	cell migration [GO:0016477]	hit with GO BP
GN004306	Chromosome_1A	9516	4	48	34.74148802017655	0.1679798057064178	75.7689422355589	27	0.8518518518518519	82.5657894736842	8	1	73.76093294460641	19	0.7894736842105263	65.83892617449665	40	0.775	methylated (>=50%)	P32748	Dihydroorotate dehydrogenase (quinone), mitochondrial (DHOdehase) (Dihydroorotate oxidase) (EC 1.3.5.2)	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; 'de novo' UMP biosynthetic process [GO:0044205]	hit with GO BP
GN004307	Chromosome_1A	9684	5	205	40.91284593143329	0.5062332464289648	84.63371054198927	205	0.9414634146341463	79.49034114262227	74	0.8918918918918919	86.73264005367326	131	0.9694656488549618	42.093541202672604	8	0.375	methylated (>=50%)	Q8BJ64	Choline dehydrogenase, mitochondrial (CDH) (CHD) (EC 1.1.99.1)	glycine betaine biosynthetic process from choline [GO:0019285]	hit with GO BP
GN004308	Chromosome_1A	351	1	1	45.01424501424501	0.05627705627705628	0	1	0	0	1	0	NA	NA	NA	38.77906976744186	45	0.4	NA	NA	NA	NA	no Swiss-Prot hit
GN004309	Chromosome_1A	1329	1	31	38.37471783295711	0.6472131456579113	0.2347417840375587	16	0	0.2347417840375587	16	0	NA	NA	NA	0.8019246190858059	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004310	Chromosome_1A	19116	2	528	44.51245030341075	0.6052440321394494	1.1273957158962795	83	0	1.1560693641618498	82	0	0	1	0	0.6674757281553398	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004311	Chromosome_1A	891	1	44	44.10774410774411	1.0168067226890756	0.5277044854881267	42	0	0.5277044854881267	42	0	NA	NA	NA	0.6319702602230484	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004312	Chromosome_1A	5372	7	81	35.40580789277736	0.48650661168759873	31.754874651810585	79	0.3670886075949367	26.07086197778953	50	0.34	45.165315034310666	29	0.41379310344827586	15.82541567695962	40	0.125	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016601	Chromosome_1A	339	1	16	59.29203539823009	0.5386295928500496	NA	0	NA	NA	NA	NA	NA	NA	NA	0.48796356538711777	77	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004313	Chromosome_1A	513	1	12	52.046783625730995	0.34799321650650084	0	4	0	0	4	0	NA	NA	NA	0.3965392934390771	65	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004314	Chromosome_1A	2331	5	53	36.67953667953668	0.6827466150870406	1.510361784334387	53	0	0.8118081180811808	30	0	2.1447721179624666	23	0	0.3794411866160745	44	0	unmethylated (<10%)	O61366	Serine-enriched protein	NA	hit, no GO BP
GN004315	Chromosome_1A	22778	15	410	34.09869172008078	0.621215757561567	28.943458199734106	406	0.3078817733990148	49.56521739130435	28	0.5714285714285714	27.767215011986444	378	0.28835978835978837	46.51567944250871	31	0.41935483870967744	sparse (10-50%)	Q9Z0J5	Thioredoxin reductase 2, mitochondrial (EC 1.8.1.9) (Thioredoxin reductase TR3)	cell redox homeostasis [GO:0045454]; heart development [GO:0007507]; hemopoiesis [GO:0030097]; protein-containing complex assembly [GO:0065003]; response to hydrogen peroxide [GO:0042542]; response to hyperoxia [GO:0055093]; response to oxygen radical [GO:0000305]; response to selenium ion [GO:0010269]	hit with GO BP
GN004316	Chromosome_1A	1524	1	61	41.732283464566926	0.9237281399046104	2.1454735740450026	61	0	2.1454735740450026	61	0	NA	NA	NA	0.7074746231928637	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004317	Chromosome_1A	4497	5	52	34.20057816321992	0.3955145118733509	57.63840224246671	52	0.7307692307692307	56.859035004730366	20	0.75	58.09682804674458	32	0.71875	48.705694942254084	36	0.5555555555555556	methylated (>=50%)	Q64429	Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1) (Cytochrome P450CMEF) (Cytochrome P450EF) (Hydroperoxy icosatetraenoate dehydratase) (EC 4.2.1.152)	angiogenesis [GO:0001525]; arachidonate metabolic process [GO:0019369]; benzene-containing compound metabolic process [GO:0042537]; blood vessel morphogenesis [GO:0048514]; cell adhesion [GO:0007155]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; collagen fibril organization [GO:0030199]; DNA modification [GO:0006304]; endothelial cell migration [GO:0043542]; endothelial cell-cell adhesion [GO:0071603]; estrogen metabolic process [GO:0008210]; intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; lipid catabolic process [GO:0016042]; negative regulation of cell adhesion mediated by integrin [GO:0033629]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; nitric oxide biosynthetic process [GO:0006809]; positive regulation of angiogenesis [GO:0045766]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of translation [GO:0045727]; positive regulation of vascular endothelial growth factor production [GO:0010575]; regulation of reactive oxygen species metabolic process [GO:2000377]; response to toxic substance [GO:0009636]; retina vasculature development in camera-type eye [GO:0061298]; retinal blood vessel morphogenesis [GO:0061304]; retinal metabolic process [GO:0042574]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; steroid metabolic process [GO:0008202]; toxin metabolic process [GO:0009404]; trabecular meshwork development [GO:0002930]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN003287	Chromosome_1A	6075	5	96	36.16460905349794	0.4921743269313538	86.16943180149758	96	1	90.54726368159204	20	1	85.58348593307808	76	1	80.28092922744463	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003286	Chromosome_1A	1939	3	28	37.0293965961836	0.42137451977181883	95.00998003992017	28	1	96.53179190751445	13	1	93.711467324291	15	1	92.32409381663113	14	1	methylated (>=50%)	Q5U379	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A	chromatin remodeling [GO:0006338]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003285	Chromosome_1A	4829	5	31	41.70635742389729	0.15732137808983038	84.3814789219074	31	1	79.31873479318735	11	1	86.38996138996139	20	1	17.278617710583152	41	0.17073170731707318	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004319	Chromosome_1A	43013	29	637	34.494222676865135	0.4995107036649734	80.6504494976203	609	0.9244663382594417	87.79800051268906	94	0.9787234042553191	79.82841475279342	515	0.9145631067961165	74.15349887133183	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004320	Chromosome_1A	921	1	41	45.49402823018458	0.8671121521080187	0.30612244897959184	41	0	0.30612244897959184	41	0	NA	NA	NA	1.4254385964912282	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004321	Chromosome_1A	22410	17	341	37.51450245426149	0.43946124231570666	90.23166435358172	333	0.96996996996997	95.14405956620266	62	1	89.26174496644295	271	0.9630996309963099	4.0829986613119145	25	0.04	methylated (>=50%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN004322	Chromosome_1A	540	1	24	43.51851851851852	0.940084143333817	0.6309148264984227	24	0	0.6309148264984227	24	0	NA	NA	NA	0.6289308176100629	37	0	unmethylated (<10%)	Q8K0S0	Phytanoyl-CoA hydroxylase-interacting protein (Phytanoyl-CoA hydroxylase-associated protein 1) (PAHX-AP1) (PAHXAP1)	intracellular protein localization [GO:0008104]	hit with GO BP
GN004323	Chromosome_1A	540	1	22	42.77777777777778	0.8913565426170468	0.49382716049382713	22	0	0.49382716049382713	22	0	NA	NA	NA	0.50682261208577	41	0	unmethylated (<10%)	Q0V9U8	Phytanoyl-CoA hydroxylase-interacting protein-like	NA	hit, no GO BP
GN003279	Chromosome_1A	7214	5	149	35.500415858053785	0.6562025347366365	0.6442985655239485	149	0	0	12	0	0.6774028629856851	137	0	0.5506607929515418	41	0	unmethylated (<10%)	Q9GLM3	X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 (RPGR-interacting protein 1)	non-motile cilium assembly [GO:1905515]; retinal rod cell development [GO:0046548]	hit with GO BP
GN003280	Chromosome_1A	486	1	26	43.62139917695473	1.1262032085561497	0.8849557522123894	26	0	0.8849557522123894	26	0	NA	NA	NA	1.3093788063337393	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004325	Chromosome_1A	26544	26	328	34.85533453887884	0.4083302555314256	87.66530080089402	325	0.9507692307692308	85.98893096417127	72	0.9166666666666666	87.98425982375437	253	0.9604743083003953	29.698275862068964	36	0.3888888888888889	methylated (>=50%)	Q810B6	Ankyrin repeat and FYVE domain-containing protein 1 (Ankyrin repeats hooked to a zinc finger motif) (Rab5-binding and ankyrin repeats-containing protein) (Rabankyrin-5) (Rank-5)	endocytosis [GO:0006897]; endosomal transport [GO:0016197]; endosomal vesicle fusion [GO:0034058]; Golgi to lysosome transport [GO:0090160]; positive regulation of pinocytosis [GO:0048549]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN004326	Chromosome_1A	4351	5	48	37.11790393013101	0.3205186051436938	78.45559845559846	48	0.875	59.84251968503937	18	0.7222222222222222	86.2144420131291	30	0.9666666666666667	14.83271375464684	39	0.1794871794871795	methylated (>=50%)	Q9D404	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase)	acyl-CoA metabolic process [GO:0006637]; medium-chain fatty acid biosynthetic process [GO:0051792]; short-chain fatty acid biosynthetic process [GO:0051790]	hit with GO BP
GN004327	Chromosome_1A	11894	6	106	38.380696149318986	0.2517171279948665	68.0952380952381	105	0.6857142857142857	68.84154460719041	37	0.5945945945945946	67.82629558541267	68	0.7352941176470589	2.885936784241869	39	0	methylated (>=50%)	Q148G5	Proline dehydrogenase 1, mitochondrial (EC 1.5.5.2) (Proline oxidase)	L-proline catabolic process [GO:0006562]	hit with GO BP
GN004328	Chromosome_1A	16880	8	163	34.76303317535545	0.32029241944496184	51.597883597883595	161	0.4658385093167702	49.4466800804829	42	0.5	52.17099973197534	119	0.453781512605042	0.7289595758780649	62	0	methylated (>=50%)	Q61382	TNF receptor-associated factor 4 (EC 2.3.2.27) (Cysteine-rich motif associated to RING and Traf domains protein 1)	cell surface receptor signaling pathway [GO:0007166]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein kinase activity [GO:0045860]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; respiratory gaseous exchange by respiratory system [GO:0007585]; respiratory tube development [GO:0030323]	hit with GO BP
GN004329	Chromosome_1A	4299	1	138	40.70714119562689	0.8041657178177559	1.0422380691168405	138	0	1.0422380691168405	138	0	NA	NA	NA	1.1099899091826437	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004330	Chromosome_1A	354	1	0	45.19774011299435	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.6342412451361867	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004331	Chromosome_1A	1668	1	52	38.60911270983213	0.8448860315604909	0.5206738131699847	52	0	0.5206738131699847	52	0	NA	NA	NA	0.5656108597285068	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004332	Chromosome_1A	1140	1	49	42.280701754385966	0.9641507154322799	0.7761966364812419	49	0	0.7761966364812419	49	0	NA	NA	NA	0.5141388174807198	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004333	Chromosome_1A	1901	3	64	44.60810099947396	0.6998337618710705	0.4421518054532056	59	0	0.6765899864682002	39	0	0.16181229773462782	20	0	0.494641384995878	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004334	Chromosome_1A	1894	2	66	48.204857444561775	0.6069864330733896	0.5988023952095808	66	0	0.6334841628959276	59	0	0.5309734513274337	7	0	0.3550942365473914	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003269	Chromosome_1A	44773	20	665	35.89886762111094	0.46398733475755133	57.21637146960268	623	0.6308186195826645	71.13933601609658	181	0.8397790055248618	52.86981783919598	442	0.5452488687782805	52.8	21	0.6190476190476191	methylated (>=50%)	G4SLH0	Titin homolog (EC 2.7.11.1)	NA	hit, no GO BP
GN003268	Chromosome_1A	295	1	1	42.3728813559322	0.08923169993950393	66.66666666666667	1	1	66.66666666666667	1	1	NA	NA	NA	81.49814716781366	47	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004335	Chromosome_1A	249	1	0	42.570281124497996	0	NA	0	NA	NA	NA	NA	NA	NA	NA	62.295081967213115	7	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003266	Chromosome_1A	159	1	0	43.39622641509434	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003267	Chromosome_1A	249	1	0	42.570281124497996	0	NA	0	NA	NA	NA	NA	NA	NA	NA	51.492537313432834	3	0.3333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN004337	Chromosome_1A	159	1	0	42.76729559748428	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003265	Chromosome_1A	528	1	33	46.02272727272727	1.1808078069937653	0.24968789013732834	33	0	0.24968789013732834	33	0	NA	NA	NA	0.35685320356853206	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004339	Chromosome_1A	2109	4	38	37.69559032716928	0.507793491484185	89.08765652951699	38	0.9736842105263158	90.13761467889908	31	0.967741935483871	85.36585365853658	7	1	66.13704071499504	37	0.7837837837837838	methylated (>=50%)	Q04336	Uncharacterized protein YMR196W	oligosaccharide metabolic process [GO:0009311]	hit with GO BP
GN004340	Chromosome_1A	183	1	4	49.18032786885246	0.36219693221177635	86.84210526315789	4	1	86.84210526315789	4	1	NA	NA	NA	82.98298298298299	25	0.92	NA	NA	NA	NA	no Swiss-Prot hit
GN004341	Chromosome_1A	489	1	15	47.852760736196316	0.5361842105263158	53.88235294117647	15	0.6666666666666666	53.88235294117647	15	0.6666666666666666	NA	NA	NA	50.11363636363637	21	0.42857142857142855	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004342	Chromosome_1A	71870	33	1087	35.587866982050926	0.47921906078850096	82.34821959894269	1055	0.933649289099526	90.08137571011822	127	0.9448818897637795	81.58214948437927	928	0.9321120689655172	31.40730237504431	43	0.32558139534883723	methylated (>=50%)	Q09428	ATP-binding cassette sub-family C member 8 (Sulfonylurea receptor 1)	female pregnancy [GO:0007565]; intracellular glucose homeostasis [GO:0001678]; memory [GO:0007613]; negative regulation of angiogenesis [GO:0016525]; negative regulation of blood-brain barrier permeability [GO:1905604]; negative regulation of glial cell proliferation [GO:0060253]; negative regulation of insulin secretion [GO:0046676]; negative regulation of low-density lipoprotein particle clearance [GO:0010989]; negative regulation of neuroblast migration [GO:0061855]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of potassium ion transport [GO:0043268]; positive regulation of tight junction disassembly [GO:1905075]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of uterine smooth muscle relaxation [GO:1900721]; potassium ion import across plasma membrane [GO:1990573]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of insulin secretion [GO:0050796]; response to insulin [GO:0032868]; response to lipopolysaccharide [GO:0032496]; response to pH [GO:0009268]; response to xenobiotic stimulus [GO:0009410]; response to zinc ion [GO:0010043]; transmembrane transport [GO:0055085]; visual learning [GO:0008542]	hit with GO BP
GN004343	Chromosome_1A	1932	2	42	34.93788819875776	0.7140820529067005	79.62835512732278	42	0.9047619047619048	92.58241758241758	8	1	75.29843893480258	34	0.8823529411764706	82.11781206171108	18	0.9444444444444444	methylated (>=50%)	P49024	Paxillin	endothelial cell migration [GO:0043542]; response to muscle stretch [GO:0035994]; substrate adhesion-dependent cell spreading [GO:0034446]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN004344	Chromosome_1A	1284	3	32	42.912772585669785	0.5417435789251622	1.1494252873563218	32	0	1.002865329512894	29	0	2.3529411764705883	3	0	1.008827238335435	33	0	unmethylated (<10%)	F1NV61	Caspase-7 (CASP-7) (EC 3.4.22.60) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	apoptotic process [GO:0006915]; defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; lymphocyte apoptotic process [GO:0070227]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; proteolysis [GO:0006508]	hit with GO BP
GN003261	Chromosome_1A	2028	4	55	35.74950690335306	0.8606481481481482	2.54259501965924	55	0	8.68596881959911	14	0	0.6513541309564621	41	0	0.9151921903599756	45	0	unmethylated (<10%)	Q80XI3	Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII)	positive regulation of meiosis I [GO:0060903]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of translation [GO:0045727]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]; translational initiation [GO:0006413]	hit with GO BP
GN004345	Chromosome_1A	8238	6	275	35.25127458120903	1.0747207111387738	1.193263348689676	275	0	0.42095416276894293	58	0	1.341979645140953	217	0	1.7803157541148809	71	0	unmethylated (<10%)	O08738	Caspase-6 (CASP-6) (EC 3.4.22.59) (Apoptotic protease Mch-2) [Cleaved into: Caspase-6 subunit p18; Caspase-6 subunit p11]	activation of innate immune response [GO:0002218]; acute inflammatory response to non-antigenic stimulus [GO:0002525]; apoptotic process [GO:0006915]; axonal fasciculation [GO:0007413]; cellular response to staurosporine [GO:0072734]; epithelial cell differentiation [GO:0030855]; hepatocyte apoptotic process [GO:0097284]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; positive regulation of apoptotic process [GO:0043065]; positive regulation of necroptotic process [GO:0060545]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of release of cytochrome c from mitochondria [GO:0090200]; positive regulation of retinal cell programmed cell death [GO:0046670]; protein autoprocessing [GO:0016540]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of programmed cell death [GO:0043067]; response to cytokine [GO:0034097]; response to glucose [GO:0009749]; response to hydrogen peroxide [GO:0042542]; response to iron ion [GO:0010039]	hit with GO BP
GN020461	Chromosome_1A	975	3	30	37.43589743589744	0.8863636363636364	0.44596912521440824	29	0	0.6322444678609063	21	0	0.09832841691248771	8	0	1.3780431786862655	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004346	Chromosome_1A	441	1	6	48.52607709750567	0.27088452088452086	1.5463917525773196	6	0	1.5463917525773196	6	0	NA	NA	NA	0.33921302578018997	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003256	Chromosome_1A	554	1	14	38.44765342960289	0.7027908662558898	0.6514657980456026	14	0	0.6514657980456026	14	0	NA	NA	NA	0.49170251997541486	71	0	unmethylated (<10%)	Q99JY3	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN003255	Chromosome_1A	1358	2	35	42.70986745213549	0.5659748270400934	6.262230919765166	28	0	5.800464037122969	25	0	8.75	3	0	5.351280367695338	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003254	Chromosome_1A	499	1	26	47.09418837675351	0.9435636363636364	0	4	0	0	4	0	NA	NA	NA	0.45691906005221933	39	0	NA	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN004348	Chromosome_1A	498	1	26	46.78714859437751	0.9591111111111111	0.17889087656529518	26	0	0.17889087656529518	26	0	NA	NA	NA	0.56657223796034	51	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN004349	Chromosome_1A	1244	5	32	39.30868167202572	0.6671359141947377	0.8690054715159318	32	0	0.7228915662650602	27	0	1.1627906976744187	5	0	0.6915629322268326	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003252	Chromosome_1A	390	1	14	44.87179487179487	0.7142857142857143	1.7133956386292835	14	0	1.7133956386292835	14	0	NA	NA	NA	0.2562225475841874	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004351	Chromosome_1A	10257	4	313	37.925319294140586	0.8486710209933955	0.6731205566480108	307	0	0.7754800590841949	98	0	0.646756705345254	209	0	0.7340241796200345	48	0	unmethylated (<10%)	B7ZRU9	MDS1 and EVI1 complex locus protein EVI1-A (Ecotropic virus integration site 1 protein homolog-A) (Evi-1) (xEvi-1)	negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pronephric distal tubule morphogenesis [GO:0039013]; pronephric duct development [GO:0039022]; pronephros development [GO:0048793]; proximal/distal pattern formation involved in pronephric nephron development [GO:0072196]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004352	Chromosome_1A	9541	10	180	35.53086678545226	0.6019851650676286	92.18854097268488	180	1	94.67840735068913	49	1	91.49638143891018	131	1	75.20749095552245	65	0.8307692307692308	methylated (>=50%)	Q5ZMP6	AP-2 complex subunit mu (AP-2 mu chain) (Clathrin assembly protein complex 2 mu medium chain) (Clathrin coat assembly protein AP50) (Clathrin coat-associated protein AP50) (HA2 50 kDa subunit) (Mu2-adaptin) (Plasma membrane adaptor AP-2 50 kDa protein)	clathrin-dependent endocytosis [GO:0072583]; Golgi to vacuole transport [GO:0006896]; intracellular protein transport [GO:0006886]	hit with GO BP
GN004353	Chromosome_1A	2470	4	32	34.534412955465584	0.4399763980272313	88.55954238169527	30	1	91.02564102564102	13	1	86.8766404199475	17	1	87.66135155656795	45	0.9333333333333333	methylated (>=50%)	P13732	Large ribosomal subunit protein eL22 (60S ribosomal protein L22) (Development-specific protein 217)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN003248	Chromosome_1A	1577	2	57	41.66138237159163	0.8334167779261237	1.3201320132013201	50	0	1.0775862068965518	13	0	1.4272121788772598	37	0	0.6412997007268063	50	0	unmethylated (<10%)	Q0VD32	cAMP-responsive element-binding protein-like 2	positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; protein stabilization [GO:0050821]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN004354	Chromosome_1A	474	1	24	46.413502109704645	0.9408651062773964	1.745635910224439	23	0	1.745635910224439	23	0	NA	NA	NA	1.3769363166953528	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003246	Chromosome_1A	1221	1	34	38.9025389025389	0.7528016537917528	0.5528255528255528	34	0	0.5528255528255528	34	0	NA	NA	NA	1.1657214870825456	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004356	Chromosome_1A	753	1	25	40.90305444887118	0.8088077336197637	0.7744433688286544	25	0	0.7744433688286544	25	0	NA	NA	NA	0.42780748663101603	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004357	Chromosome_1A	3144	7	99	37.94529262086514	0.8747913188647746	1.0275300504071345	99	0	0.47244094488188976	42	0	1.3525976022133415	57	0	0.15558148580318942	68	0	unmethylated (<10%)	Q7TT41	DBH-like monooxygenase protein 2 (EC 1.14.17.-) (Dopamine-beta-hydroxylase-like protein)	NA	hit, no GO BP
GN003243	Chromosome_1A	21346	14	566	35.557013023517285	0.8401248870036854	0.9581826258011296	564	0	0.5674142123750338	76	0	1.0101736348276233	488	0	0.6129271916790491	69	0	unmethylated (<10%)	Q95ZS2	Tyrosine decarboxylase (EC 4.1.1.25)	amino acid metabolic process [GO:0006520]; octopamine biosynthetic process [GO:0006589]	hit with GO BP
GN012851	Chromosome_1A	366	1	23	61.202185792349724	0.6817298347910593	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6907545164718385	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018811	Chromosome_1A	264	1	6	55.68181818181818	0.3130434782608696	4.166666666666667	2	0	4.166666666666667	2	0	NA	NA	NA	0.45992115637319314	81	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004358	Chromosome_1A	4784	2	102	34.887123745819395	0.7020536415666031	83.42932565394769	101	0.900990099009901	38.048780487804876	11	0.45454545454545453	87.04495400958673	90	0.9555555555555556	1.3618677042801557	26	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004359	Chromosome_1A	1458	1	2	38.065843621399175	0.05762845849802371	76.55172413793103	2	1	76.55172413793103	2	1	NA	NA	NA	87.52136752136752	36	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004360	Chromosome_1A	11516	6	151	33.56200069468566	0.46652050643126497	87.83733826247689	151	0.9668874172185431	85.49270072992701	19	1	88.10160427807487	132	0.9621212121212122	86.2155388471178	7	1	methylated (>=50%)	P29594	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cellular response to mechanical stimulus [GO:0071260]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; ectopic germ cell programmed cell death [GO:0035234]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; luteolysis [GO:0001554]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; neural retina development [GO:0003407]; positive regulation of apoptotic process [GO:0043065]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of neuron apoptotic process [GO:0043525]; protein processing [GO:0016485]; release of cytochrome c from mitochondria [GO:0001836]	hit with GO BP
GN004361	Chromosome_1A	354	1	2	38.13559322033898	0.15684536996012405	0	2	0	0	2	0	NA	NA	NA	2.9473684210526314	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004362	Chromosome_1A	2056	3	21	35.262645914396884	0.32884474774555206	0.7662835249042146	9	0	0.5154639175257731	7	0	1.492537313432836	2	0	0.9162303664921466	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004363	Chromosome_1A	1692	1	14	36.22931442080378	0.25328799640726246	0.9345794392523364	6	0	0.9345794392523364	6	0	NA	NA	NA	1.5444015444015444	10	0	unmethylated (<10%)	Q9UUA2	ATP-dependent DNA helicase pfh1 (EC 5.6.2.3) (DNA 5'-3' helicase pfh1) (DNA repair and recombination helicase pfh1) (PIF1 helicase homolog) (RRM3/PIF1 homolog 1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA strand elongation involved in mitotic DNA replication [GO:1902983]; mitochondrial DNA repair [GO:0043504]; mitotic recombination-dependent replication fork processing [GO:1990426]; removal of RNA primer involved in mitotic DNA replication [GO:1903469]; replication fork processing [GO:0031297]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN004364	Chromosome_1A	486	1	9	48.35390946502058	1.0172093023255815	1.1764705882352942	9	0	1.1764705882352942	9	0	NA	NA	NA	0.4932182490752158	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004365	Chromosome_1A	3427	2	135	40.82287715202801	0.9455474076617453	0.5784959106323558	135	0	0.5481823427582228	107	0	0.6464124111182935	28	0	1.1402508551881414	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004366	Chromosome_1A	1227	1	43	41.56479217603912	0.8164177949709864	0.615595075239398	43	0	0.615595075239398	43	0	NA	NA	NA	0.5265005265005265	52	0	unmethylated (<10%)	Q5U258	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M)	NA	hit, no GO BP
GN004367	Chromosome_1A	11367	9	165	35.893375560833995	0.45078532408122884	83.09457919583265	164	0.9451219512195121	95.061099796334	32	1	80.81767099399342	132	0.9318181818181818	89.6574014221073	26	1	methylated (>=50%)	Q96ES7	SAGA-associated factor 29 (Coiled-coil domain-containing protein 101) (SAGA complex-associated factor 29)	establishment of protein localization to chromatin [GO:0071169]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of DNA repair [GO:0006282]; regulation of DNA-templated transcription [GO:0006355]; regulation of embryonic development [GO:0045995]; regulation of RNA splicing [GO:0043484]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of tubulin deacetylation [GO:0090043]; response to endoplasmic reticulum stress [GO:0034976]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN004368	Chromosome_1A	8635	11	82	34.68442385639838	0.3188005280399668	77.12743877127438	82	0.8536585365853658	79.73025048169556	51	0.8627450980392157	74.08906882591093	31	0.8387096774193549	0.5336179295624333	43	0	methylated (>=50%)	Q569K6	Coiled-coil domain-containing protein 157	NA	hit, no GO BP
GN004369	Chromosome_1A	195	1	6	47.69230769230769	0.5426716141001855	95.98853868194843	6	1	95.98853868194843	6	1	NA	NA	NA	91.22541603630863	20	0.95	methylated (>=50%)	Q7K556	TRPL translocation defect protein 14	photoreceptor cell maintenance [GO:0045494]	hit with GO BP
GN004370	Chromosome_1A	574	3	20	41.46341463414634	0.8164426427707845	0.6106870229007634	20	0	0.7380073800738007	17	0	0	3	0	0.9869896814715119	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004371	Chromosome_1A	1680	1	3	37.55952380952381	0.0934059824307795	98.33333333333333	3	1	98.33333333333333	3	1	NA	NA	NA	92.71935283136278	35	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003232	Chromosome_1A	5021	6	81	33.06114319856602	0.5906724237842736	78.73768085552527	81	0.7654320987654321	85.83662714097497	25	0.8	75.42294678560442	56	0.75	0.4896626768226333	59	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004372	Chromosome_1A	6735	8	125	35.67928730512249	0.5831774729842062	86.44470868014268	124	0.9354838709677419	82.51859723698193	37	0.8918918918918919	87.5765931372549	87	0.9540229885057471	0.986958054282693	47	0	methylated (>=50%)	Q9CXW2	Small ribosomal subunit protein mS22 (28S ribosomal protein S22, mitochondrial) (MRP-S22) (S22mt)	mitochondrial translation [GO:0032543]	hit with GO BP
GN004373	Chromosome_1A	6593	8	107	35.08266343091157	0.5275930512926367	69.59986436080027	106	0.7075471698113207	92.72108843537416	35	0.9714285714285714	61.924119241192415	71	0.5774647887323944	0.33702455464612424	53	0	methylated (>=50%)	Q9VQ37	Mitochondrial carrier protein Rim2	deoxynucleotide transport [GO:0030302]; pyrimidine nucleotide import into mitochondrion [GO:1990519]	hit with GO BP
GN004374	Chromosome_1A	393	1	19	44.783715012722645	0.97442254991517685	0.2801120448179272	19	0	0.2801120448179272	19	0	NA	NA	NA	0.6707494896471274	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004375	Chromosome_1A	1485	1	41	40.06734006734007	0.6903061224489796	0.3022974607013301	41	0	0.3022974607013301	41	0	NA	NA	NA	0.5555555555555556	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004376	Chromosome_1A	687	3	12	41.630276564774384	0.40322817314746884	95.72192513368984	12	1	93.47826086956522	8	1	99.30555555555556	4	1	93.80670611439842	34	1	methylated (>=50%)	Q9WV50	60S ribosome subunit biogenesis protein NIP7 homolog (Nucleolar pre-rRNA processing protein NIP7) (PEachy) (kDa93)	ribosomal large subunit biogenesis [GO:0042273]; ribosome assembly [GO:0042255]	hit with GO BP
GN004377	Chromosome_1A	14188	5	117	34.28954045672399	0.2805912850165245	63.96839594514013	117	0.7094017094017094	49.757986447241045	33	0.45454545454545453	66.55506607929516	84	0.8095238095238095	59.38945420906568	51	0.5294117647058824	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003226	Chromosome_1A	624	1	0	43.91025641025641	0	NA	0	NA	NA	NA	NA	NA	NA	NA	92.13483146067416	3	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004379	Chromosome_1A	309	1	1	41.10032362459547	0.07667493796526055	70.83333333333333	1	1	70.83333333333333	1	1	NA	NA	NA	80.55555555555556	47	0.8723404255319149	NA	NA	NA	NA	no Swiss-Prot hit
GN003224	Chromosome_1A	471	1	9	40.339702760084926	0.47304988282557753	80	1	1	80	1	1	NA	NA	NA	93.75	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004380	Chromosome_1A	366	1	0	39.89071038251366	0	NA	0	NA	NA	NA	NA	NA	NA	NA	67.67676767676768	8	0.875	NA	NA	NA	NA	no Swiss-Prot hit
GN004381	Chromosome_1A	606	1	0	38.77887788778878	0	NA	0	NA	NA	NA	NA	NA	NA	NA	66.28895184135978	24	0.5833333333333334	NA	NA	NA	NA	no Swiss-Prot hit
GN004382	Chromosome_1A	243	1	7	44.44444444444444	0.5964235624123422	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004383	Chromosome_1A	225	1	14	48.44444444444444	1.09375	88.08510638297872	14	1	88.08510638297872	14	1	NA	NA	NA	72.50392054364872	24	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017543	Chromosome_1A	571	1	15	44.13309982486865	0.5403444577629172	1.1884550084889642	15	0	1.1884550084889642	15	0	NA	NA	NA	0.8157099697885196	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004384	Chromosome_1A	201	1	24	65.67164179104478	1.1097308488612836	92.19047619047619	24	1	92.19047619047619	24	1	NA	NA	NA	73.03727200634417	70	0.8285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004385	Chromosome_1A	1389	1	77	51.61987041036717	0.8404158350489541	78.50467289719626	77	0.987012987012987	78.50467289719626	77	0.987012987012987	NA	NA	NA	84.7439157282964	110	0.990909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004386	Chromosome_1A	1895	2	107	53.45646437994723	0.8182606941081517	85.0201072386059	107	0.9813084112149533	85.99111828825191	99	0.98989898989899	80.27613412228797	8	0.875	85.34220005541701	85	0.9882352941176471	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004387	Chromosome_1A	489	1	31	49.693251533742334	1.0273109243697478	25.120192307692307	31	0.3870967741935484	25.120192307692307	31	0.3870967741935484	NA	NA	NA	71.9734304692522	135	0.8222222222222222	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019923	Chromosome_1A	389	2	46	59.6401028277635	1.3333830104321907	43.867924528301884	46	0.2826086956521739	43.867924528301884	46	0.2826086956521739	NA	NA	NA	31.87520102926986	55	0.5272727272727272	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004388	Chromosome_1A	1332	1	99	55.030030030030034	0.9877012957830874	81.03019538188278	99	0.98989898989899	81.03019538188278	99	0.98989898989899	NA	NA	NA	71.97703035274816	144	0.8680555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004389	Chromosome_1A	936	2	68	55.02136752136752	0.9774556176669329	80.76256499133449	66	0.9393939393939394	82.58845437616387	62	0.9516129032258065	56.25	4	0.75	69.08055329536208	98	0.8061224489795918	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004390	Chromosome_1A	261	1	8	50.95785440613027	0.47218453188602444	2.8368794326241136	8	0	2.8368794326241136	8	0	NA	NA	NA	1.7736834868692424	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003210	Chromosome_1A	970	4	46	51.03092783505155	0.7428495321812673	0.7061379684953829	46	0	0.7705986959098993	44	0	0	2	0	1.0719754977029097	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004391	Chromosome_1A	360	2	16	49.166666666666664	0.735632183908046	0.9823182711198428	16	0	0.7712082262210797	13	0	1.6666666666666667	3	0	2.8613352898019078	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004392	Chromosome_1A	1313	6	54	47.98172124904798	0.7198464912280702	0.7299270072992701	54	0	0.7073386383731212	50	0	0.9803921568627451	4	0	2.202643171806167	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020006	Chromosome_1A	155	1	2	39.354838709677416	0.38847117794486213	17.256637168141594	2	0	17.256637168141594	2	0	NA	NA	NA	15.481373971940009	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004393	Chromosome_1A	873	1	3	40.43528064146621	0.1149692712906058	2.8925619834710745	3	0	2.8925619834710745	3	0	NA	NA	NA	6.119162640901771	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001345	Chromosome_1A	2225	2	73	43.28089887640449	0.7053308552123049	1.9404019404019404	38	0	1.2598425196850394	18	0	2.4752475247524752	20	0	4.315196998123827	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004394	Chromosome_1A	525	1	16	41.904761904761905	0.6979062811565304	0.644122383252818	16	0	0.644122383252818	16	0	NA	NA	NA	0.43407487791644056	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004395	Chromosome_1A	912	1	26	43.421052631578945	0.6074548482131421	0.1443001443001443	26	0	0.1443001443001443	26	0	NA	NA	NA	1.1097410604192355	58	0	unmethylated (<10%)	P86952	Tyrosinase-like protein (Tyrosinase-2)	NA	hit, no GO BP
GN004396	Chromosome_1A	342	1	10	48.24561403508772	0.5039787798408488	0.4	10	0	0.4	10	0	NA	NA	NA	0.41025641025641024	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004397	Chromosome_1A	1059	1	37	41.73748819641171	0.8059692282376173	0.5200594353640416	37	0	0.5200594353640416	37	0	NA	NA	NA	0.7223476297968398	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004398	Chromosome_1A	11820	9	168	35.33840947546531	0.45682988000899966	91.53188324967466	167	0.9880239520958084	90.24716098864396	33	1	91.73955296404276	134	0.9850746268656716	85.88351431391905	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004399	Chromosome_1A	1044	1	5	36.68582375478927	0.14471057884231536	50.99337748344371	5	0.6	50.99337748344371	5	0.6	NA	NA	NA	12.280701754385966	27	0.1111111111111111	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003199	Chromosome_1A	10727	14	152	33.3364407569684	0.5100202068227743	85.01938964761423	152	0.9605263157894737	86.87002652519894	23	0.9565217391304348	84.74985512845277	129	0.9612403100775194	18.22349570200573	25	0.2	methylated (>=50%)	Q8NA66	Cyclic nucleotide-binding domain-containing protein 1	NA	hit, no GO BP
GN003200	Chromosome_1A	10368	7	83	35.72530864197531	0.26356082017281113	75.29546946815496	83	0.8433734939759037	76.05790645879733	13	0.8461538461538461	75.1636503658067	70	0.8428571428571429	0.43907793633369924	26	0	methylated (>=50%)	Q28H30	UPF0489 protein C5orf22 homolog	NA	hit, no GO BP
GN004400	Chromosome_1A	1964	2	72	39.663951120162935	0.9352133541440703	0.5208333333333334	72	0	0.6654835847382431	55	0	0.12224938875305623	17	0	0.48764629388816644	48	0	unmethylated (<10%)	P31508	Escargot/snail protein homolog	NA	hit, no GO BP
GN004401	Chromosome_1A	384	1	3	42.96875	0.17391304347826086	1.1235955056179776	3	0	1.1235955056179776	3	0	NA	NA	NA	1.6023306627822287	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004402	Chromosome_1A	480	1	8	43.333333333333336	0.35664530509891335	8.333333333333334	1	0	8.333333333333334	1	0	NA	NA	NA	3.361344537815126	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004403	Chromosome_1A	537	1	12	40.59590316573557	0.559375	0.457217504898759	12	0	0.457217504898759	12	0	NA	NA	NA	0.4282115869017632	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004404	Chromosome_1A	543	1	4	35.91160220994475	0.25150532654006486	0.29239766081871343	4	0	0.29239766081871343	4	0	NA	NA	NA	0.5062436719541006	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004405	Chromosome_1A	38756	35	985	36.936216327794405	0.7453624958055292	0.8346445919135254	948	0	0.745390349156532	167	0	0.8534968511766655	781	0	2.3024830699774266	47	0	unmethylated (<10%)	Q6YHK3	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)	negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of wound healing [GO:0061045]	hit with GO BP
GN004406	Chromosome_1A	49994	24	748	34.94819378325399	0.4918425424124702	51.11610727477116	719	0.5034770514603616	41.59132007233273	54	0.46296296296296297	51.76121889084852	665	0.5067669172932331	0.24875621890547264	136	0	methylated (>=50%)	Q96NW4	Ankyrin repeat domain-containing protein 27 (VPS9 domain-containing protein)	early endosome to late endosome transport [GO:0045022]; endocytic recycling [GO:0032456]; endosome to melanosome transport [GO:0035646]; negative regulation of SNARE complex assembly [GO:0035544]; neuron projection morphogenesis [GO:0048812]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of neuron projection development [GO:0010976]	hit with GO BP
GN004407	Chromosome_1A	1287	1	35	45.066045066045064	0.539622641509434	0.8576329331046312	31	0	0.8576329331046312	31	0	NA	NA	NA	0.30120481927710846	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013337	Chromosome_1A	971	3	25	42.327497425334705	0.5755915967183572	81.60535117056857	12	0.9166666666666666	87.23404255319149	10	1	72.07207207207207	2	0.5	3.936269915651359	45	0.06666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004408	Chromosome_1A	417	1	27	47.24220623501199	1.1826680672268908	0.6269592476489029	27	0	0.6269592476489029	27	0	NA	NA	NA	0.5641025641025641	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004409	Chromosome_1A	651	1	15	40.86021505376344	0.5706188277917372	0.5555555555555556	15	0	0.5555555555555556	15	0	NA	NA	NA	1.6114790286975718	98	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001803	Chromosome_1A	1241	1	31	44.23851732473811	0.5187567421790723	0.8025682182985554	31	0	0.8025682182985554	31	0	NA	NA	NA	0.4821600771456123	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003194	Chromosome_1A	1058	2	25	42.816635160680526	0.539289646454349	0	25	0	0	25	0	NA	NA	NA	0.5785123966942148	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003191	Chromosome_1A	483	1	4	42.028985507246375	0.19471880669219915	77.6536312849162	4	1	77.6536312849162	4	1	NA	NA	NA	5.02411575562701	51	0.058823529411764705	NA	NA	NA	NA	no Swiss-Prot hit
GN003190	Chromosome_1A	4645	4	58	37.093649085037676	0.37099617174805144	90.90425531914893	58	1	89.27893738140418	34	1	92.97820823244552	24	1	93.38993329290479	19	1	methylated (>=50%)	Q7TSG2	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)	exit from mitosis [GO:0010458]; host-mediated activation of viral transcription [GO:0043923]; negative regulation of cell growth involved in cardiac muscle cell development [GO:0061052]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN004411	Chromosome_1A	5107	11	102	34.81495985901704	0.6600264560990938	0.6349723217193096	102	0	0.5052327679538073	48	0	0.7416196974191634	54	0	0.5604203152364273	42	0	unmethylated (<10%)	Q8VYX1	Phosphoethanolamine N-methyltransferase 1 (TaPEAMT1) (EC 2.1.1.103) (Phosphoethanolamine N-methyltransferase) (WPEAMT)	phosphatidylcholine biosynthetic process [GO:0006656]	hit with GO BP
GN004412	Chromosome_1A	1242	1	11	39.93558776167472	0.22330827067669173	88.4476534296029	11	1	88.4476534296029	11	1	NA	NA	NA	69.06412478336222	16	0.75	methylated (>=50%)	Q8JZL3	Thiamine-triphosphatase (ThTPase) (EC 3.6.1.28)	dephosphorylation [GO:0016311]; thiamine diphosphate biosynthetic process [GO:0009229]; thiamine diphosphate metabolic process [GO:0042357]; thiamine metabolic process [GO:0006772]	hit with GO BP
GN003187	Chromosome_1A	3018	1	34	41.94831013916501	0.25701511603150945	81.50627615062761	34	0.9117647058823529	81.50627615062761	34	0.9117647058823529	NA	NA	NA	41.86046511627907	15	0.4	methylated (>=50%)	O73590	Zinc finger homeobox protein 4 (Zinc finger homeodomain protein 4) (ZFH-4) (Zinc finger/apterous-related homeobox protein)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN003186	Chromosome_1A	406	2	1	36.45320197044335	0.07419590643274854	5.769230769230769	1	0	5.769230769230769	1	0	NA	NA	NA	29.685807150595885	20	0.1	NA	NA	NA	NA	no Swiss-Prot hit
GN003185	Chromosome_1A	8828	6	86	40.13366560942456	0.2421445771604446	86.13958028306492	86	0.9767441860465116	86.11470461405779	61	0.9836065573770492	86.17200674536257	25	0.96	9.399684044233807	20	0	methylated (>=50%)	Q15911	Zinc finger homeobox protein 3 (AT motif-binding factor 1) (AT-binding transcription factor 1) (Alpha-fetoprotein enhancer-binding protein) (Zinc finger homeodomain protein 3) (ZFH-3)	circadian regulation of gene expression [GO:0032922]; negative regulation of myoblast differentiation [GO:0045662]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell adhesion [GO:0045785]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of locomotor rhythm [GO:1904059]; regulation of transcription by RNA polymerase II [GO:0006357]; response to transforming growth factor beta [GO:0071559]	hit with GO BP
GN003182	Chromosome_1A	678	1	8	38.200589970501476	0.3287671232876712	78.10344827586206	8	0.875	78.10344827586206	8	0.875	NA	NA	NA	83.80782918149467	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004414	Chromosome_1A	12365	6	159	34.47634452082491	0.43364089085810403	87.40199572344974	157	0.9299363057324841	62.96743063932449	15	0.6666666666666666	89.35064935064935	142	0.9577464788732394	40.570455512984246	29	0.41379310344827586	methylated (>=50%)	P26270	26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit RPN8) (26S proteasome regulatory subunit S12) (Proteasome subunit p39B) (Proteasome subunit p40) (Protein Mov34)	proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN003180	Chromosome_1A	19353	13	297	36.180437141528444	0.469864487594842	86.03892451344358	283	0.9540636042402827	80.38725796377264	28	0.8571428571428571	86.598256784323425	255	0.9647058823529412	0.6466784244562023	37	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003179	Chromosome_1A	1475	5	23	34.440677966101696	0.530982454492808	38.81884538818846	23	0.43478260869565216	70.94281298299846	9	0.8888888888888888	14.651162790697674	14	0.14285714285714285	1.9092331768388107	63	0	sparse (10-50%)	Q6B857	Cilia- and flagella-associated protein 20	cilium assembly [GO:0060271]; flagellated sperm motility [GO:0030317]; positive regulation of cell motility [GO:2000147]; positive regulation of feeding behavior [GO:2000253]; protein polyglutamylation [GO:0018095]; regulation of cilium beat frequency involved in ciliary motility [GO:0060296]	hit with GO BP
GN003178	Chromosome_1A	22787	12	275	34.01062009040242	0.4178960620402188	86.44982349974785	273	0.9377289377289377	47.225368063420156	19	0.5789473684210527	88.27782762442602	254	0.9645669291338582	0.7356122890523583	41	0	methylated (>=50%)	P28020	Casein kinase II subunit alpha (CK II) (EC 2.7.11.1)	double-strand break repair [GO:0006302]; positive regulation of aggrephagy [GO:1905337]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN003177	Chromosome_1A	4955	6	58	36.24621594349142	0.36526250502031	80.24971623155506	31	0.9354838709677419	83.80952380952381	7	1	78.73888439773646	24	0.9166666666666666	29.286880783886772	29	0.3103448275862069	methylated (>=50%)	Q9H0I3	Cilia- and flagella-associated protein 263	cilium assembly [GO:0060271]	hit with GO BP
GN003176	Chromosome_1A	333	1	9	45.34534534534534	0.5276408450704225	95.83333333333333	9	1	95.83333333333333	9	1	NA	NA	NA	88.65598027127004	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004418	Chromosome_1A	498	1	7	45.98393574297189	0.26910606762389994	86.82634730538922	7	1	86.82634730538922	7	1	NA	NA	NA	92.38927011852776	31	1	methylated (>=50%)	Q9NP91	Sodium- and chloride-dependent transporter XTRP3 (Sodium/imino-acid transporter 1) (Solute carrier family 6 member 20) (Transporter rB21A homolog)	amino acid import across plasma membrane [GO:0089718]; amino acid transport [GO:0006865]; amino-acid betaine transport [GO:0015838]; glycine import across plasma membrane [GO:1903804]; glycine transport [GO:0015816]; L-isoleucine import across plasma membrane [GO:1903806]; L-proline import across plasma membrane [GO:1904271]; neurotransmitter transport [GO:0006836]; proline import across plasma membrane [GO:1905647]; proline transport [GO:0015824]; sodium ion transmembrane transport [GO:0035725]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN003174	Chromosome_1A	3380	3	45	33.25443786982248	0.4815683741605798	82.99811439346323	45	1	95	5	1	81.84011026878015	40	1	24.920886075949365	24	0.20833333333333334	methylated (>=50%)	Q9EPL4	Protein-L-histidine N-pros-methyltransferase (EC 2.1.1.-) (DORA reverse strand protein) (DREV) (Methyltransferase-like protein 9) (mMETTL9)	NA	hit, no GO BP
GN003173	Chromosome_1A	8340	5	91	35.03597122302158	0.35560332709845976	73.30984734105016	91	0.8571428571428571	51.92307692307692	26	0.6153846153846154	79.89905639675224	65	0.9538461538461539	0.6451612903225806	59	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004419	Chromosome_1A	1228	3	32	43.07817589576547	0.5625769506084467	NA	0	NA	NA	NA	NA	NA	NA	NA	1.2532981530343008	53	0	NA	Q0D2D2	F-box only protein 31	anaphase-promoting complex-dependent catabolic process [GO:0031145]; cellular response to oxidative stress [GO:0034599]; DNA damage response [GO:0006974]; mitotic G1 DNA damage checkpoint signaling [GO:0031571]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN004420	Chromosome_1A	510	1	27	48.627450980392155	0.8955515088449532	0.5149330587023687	27	0	0.5149330587023687	27	0	NA	NA	NA	0.6783291681542306	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003161	Chromosome_1A	489	2	16	36.40081799591002	1.0003835826620637	0.5908419497784343	16	0	0.5226480836236934	14	0	0.970873786407767	2	0	0.37766387914755867	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003162	Chromosome_1A	312	1	16	42.62820512820513	1.1289009497964722	0.4333694474539545	16	0	0.4333694474539545	16	0	NA	NA	NA	0.8801955990220048	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020225	Chromosome_1A	280	1	4	37.142857142857146	0.4166666666666667	0.746268656716418	4	0	0.746268656716418	4	0	NA	NA	NA	0.4600253807106599	62	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020226	Chromosome_1A	780	1	25	39.87179487179487	0.8078548347004723	0.43478260869565216	25	0	0.43478260869565216	25	0	NA	NA	NA	0.40404040404040403	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003163	Chromosome_1A	375	1	4	37.06666666666667	0.3106876553438277	13.705583756345177	4	0	13.705583756345177	4	0	NA	NA	NA	7.554146856840993	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004423	Chromosome_1A	2741	2	78	38.19773805180591	0.7818483682693855	0.5964214711729622	78	0	0.5873715124816447	75	0	0.8620689655172413	3	0	0.7019185774450164	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004424	Chromosome_1A	699	1	17	40.629470672389125	0.5903716216216216	4.436860068259386	10	0	4.436860068259386	10	0	NA	NA	NA	3.6455245998814463	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004425	Chromosome_1A	546	1	14	45.05494505494506	0.5093283582089553	0.8064516129032258	4	0	0.8064516129032258	4	0	NA	NA	NA	0.45146726862302483	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003167	Chromosome_1A	3745	5	103	34.57943925233645	0.9213650347779562	0.4980544747081712	103	0	0.8951406649616368	25	0	0.3702941781526435	78	0	0.6026113157013726	68	0	unmethylated (<10%)	Q6DK99	Cornifelin homolog B	NA	hit, no GO BP
GN004426	Chromosome_1A	210	1	9	49.523809523809526	0.7455621301775148	0.7054673721340388	9	0	0.7054673721340388	9	0	NA	NA	NA	0.5251520176893312	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004427	Chromosome_1A	36224	36	326	33.63791961130742	0.3182763166462622	78.53771312975628	325	0.9323076923076923	81.6614420062696	51	0.9803921568627451	77.97063510129752	274	0.9233576642335767	73.09476474486415	41	0.7560975609756098	methylated (>=50%)	Q5RHR6	Protein broad-minded (TBC1 domain family member 32)	axoneme assembly [GO:0035082]; cilium assembly [GO:0060271]; non-motile cilium assembly [GO:1905515]; retinal pigment epithelium development [GO:0003406]	hit with GO BP
GN004428	Chromosome_1A	1119	1	2	37.44414655942806	0.05099343784177907	23.863636363636363	2	0	23.863636363636363	2	0	NA	NA	NA	61.51315789473684	30	0.7	NA	NA	NA	NA	no Swiss-Prot hit
GN004429	Chromosome_1A	1585	2	15	38.23343848580441	0.25906312314079305	28.125	14	0.14285714285714285	28.125	14	0.14285714285714285	NA	NA	NA	79.99115631218218	59	0.8983050847457628	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004430	Chromosome_1A	249	1	8	45.78313253012048	0.6524729773992795	0.3663003663003663	8	0	0.3663003663003663	8	0	NA	NA	NA	0.7805724197745013	43	0	unmethylated (<10%)	A4FUZ6	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)	cholesterol homeostasis [GO:0042632]	hit with GO BP
GN004431	Chromosome_1A	1158	1	52	40.06908462867012	1.1204435926539271	0.3257328990228013	13	0	0.3257328990228013	13	0	NA	NA	NA	0.3450920245398773	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003158	Chromosome_1A	367	2	11	39.509536784741144	0.7763461538461538	0.9538950715421304	11	0	0.9538950715421304	11	0	NA	NA	NA	0.9538950715421304	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003138	Chromosome_1A	3260	3	35	31.96319018404908	0.4204049299018073	2.251184834123223	26	0	0	9	0	3.292894280762565	17	0	0.4807692307692308	42	0	unmethylated (<10%)	Q6P3Z3	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]; nitrate metabolic process [GO:0042126]	hit with GO BP
GN004433	Chromosome_1A	3010	7	99	40.39867109634552	0.8061300401725934	0.38961038961038963	99	0	0.4042037186742118	58	0	0.3727865796831314	41	0	0.6432084752175558	45	0	unmethylated (<10%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN004434	Chromosome_1A	810	1	16	43.58024691358025	0.43156843156843155	2.8125	16	0	2.8125	16	0	NA	NA	NA	2.8268551236749118	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004435	Chromosome_1A	16890	8	395	35.58910597986974	0.7395188413778059	0.8963199172627768	288	0	1.104417670682731	29	0	0.8767794852455926	259	0	1.1850819100731962	61	0	unmethylated (<10%)	Q9GUM2	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT) (UDP-GalNAc:Glc-NAcbeta-R beta1,4-N-acetylgalactosaminyltransferase) (Cebeta4GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN004436	Chromosome_1A	165	1	10	46.666666666666664	1.114864864864865	0.44543429844098	10	0	0.44543429844098	10	0	NA	NA	NA	0.839030453697949	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004437	Chromosome_1A	1539	4	47	37.23196881091618	0.8812929479994152	0.7372072853425846	47	0	0.7142857142857143	33	0	0.783289817232376	14	0	0.4941757853865161	66	0	unmethylated (<10%)	O35929	GTP-binding protein REM 1 (Rad and Gem-like GTP-binding protein 1)	negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel [GO:1904878]; regulation of skeletal muscle contraction by calcium ion signaling [GO:0014722]	hit with GO BP
GN004438	Chromosome_1A	570	1	31	52.98245614035088	0.9202645695536691	0.19342359767891681	26	0	0.19342359767891681	26	0	NA	NA	NA	0.6539664486778505	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004439	Chromosome_1A	483	1	17	41.61490683229814	0.8219219219219219	0.7802340702210663	17	0	0.7802340702210663	17	0	NA	NA	NA	0.8044030482641829	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004440	Chromosome_1A	1924	4	62	37.42203742203742	0.9210077285958045	0.5439450329229888	61	0	0.6292134831460674	42	0	0.3943217665615142	19	0	0.3861003861003861	53	0	unmethylated (<10%)	P55041	GTP-binding protein GEM (GTP-binding mitogen-induced T-cell protein) (RAS-like protein KIR)	chromosome organization [GO:0051276]; metaphase chromosome alignment [GO:0051310]; mitotic cell cycle [GO:0000278]	hit with GO BP
GN004441	Chromosome_1A	366	1	20	53.55191256830601	0.8810784785748677	0.6493506493506493	20	0	0.6493506493506493	20	0	NA	NA	NA	0.5578281889178133	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004442	Chromosome_1A	207	1	11	44.44444444444444	1.1413533834586467	NA	0	NA	NA	NA	NA	NA	NA	NA	21.27659574468085	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004443	Chromosome_1A	30433	22	322	35.26763710445898	0.34111976685534945	71.9046063377981	322	0.7981366459627329	83.52272727272727	71	0.971830985915493	69.48282668772207	251	0.749003984063745	37.62019230769231	14	0.42857142857142855	methylated (>=50%)	Q96PX9	Pleckstrin homology domain-containing family G member 4B (PH domain-containing family G member 4B)	axon guidance [GO:0007411]; cell-cell adhesion [GO:0098609]; regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN004444	Chromosome_1A	5000	5	44	39.3	0.22829486564847157	95.6082786471479	44	1	97.30496453900709	36	1	91.41856392294221	8	1	79.71631205673759	15	0.8666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004445	Chromosome_1A	24641	30	298	35.513980763767705	0.3876569853843697	95.20298981211283	297	1	96.70230114151114	93	1	94.61253032681604	204	1	96.20951068228808	22	1	methylated (>=50%)	Q9P2D1	ATP-dependent chromatin remodeler CHD7 (EC 3.6.4.-) (Chromo domain-containing protein 7) (CHD-7)	central nervous system development [GO:0007417]; chordate embryonic development [GO:0043009]; chromatin remodeling [GO:0006338]; cognition [GO:0050890]; cranial nerve development [GO:0021545]; face development [GO:0060324]; genitalia development [GO:0048806]; heart morphogenesis [GO:0003007]; in utero embryonic development [GO:0001701]; inner ear morphogenesis [GO:0042472]; limb development [GO:0060173]; nose development [GO:0043584]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]; regulation of growth hormone secretion [GO:0060123]; retina development in camera-type eye [GO:0060041]; secondary palate development [GO:0062009]; skeletal system development [GO:0001501]; T cell differentiation [GO:0030217]	hit with GO BP
GN004446	Chromosome_1A	474	1	5	38.18565400843882	0.29136955987214164	91.71779141104294	5	1	91.71779141104294	5	1	NA	NA	NA	95.57894736842105	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003143	Chromosome_1A	6217	6	92	34.64693582113559	0.4935659797728763	79.945180447693	91	0.8351648351648352	65.34653465346534	8	0.625	81.1613328934345	83	0.8554216867469879	77.83816425120773	19	0.8421052631578947	methylated (>=50%)	O75771	DNA repair protein RAD51 homolog 4 (R51H3) (RAD51 homolog D) (RAD51-like protein 3) (TRAD)	DNA repair [GO:0006281]; DNA strand invasion [GO:0042148]; double-strand break repair via homologous recombination [GO:0000724]; reciprocal meiotic recombination [GO:0007131]; supramolecular fiber organization [GO:0097435]; telomere maintenance [GO:0000723]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN004447	Chromosome_1A	306	1	9	45.751633986928105	0.576271186440678	0.7936507936507936	9	0	0.7936507936507936	9	0	NA	NA	NA	0.5235602094240838	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004448	Chromosome_1A	630	1	7	41.111111111111114	0.26543878656554715	1.1235955056179776	7	0	1.1235955056179776	7	0	NA	NA	NA	1.1636927851047323	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003116	Chromosome_1A	2693	2	83	39.84404010397326	0.7770519728837129	2.8972783143107987	51	0	2.5754884547069272	50	0	30.76923076923077	1	0	3.234501347708895	14	0	unmethylated (<10%)	A4WFX9	3'-5' ssDNA/RNA exonuclease TatD (EC 3.1.11.-) (EC 3.1.13.-) (DNase TatD)	NA	hit, no GO BP
GN003117	Chromosome_1A	1059	1	22	39.47119924457035	0.5388066604995375	0.8943089430894309	22	0	0.8943089430894309	22	0	NA	NA	NA	1.0371650821089022	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003118	Chromosome_1A	1144	3	32	37.41258741258741	0.8104314715193376	0.970873786407767	31	0	1.1402508551881414	20	0	0.7782101167315175	11	0	1.043382756727073	28	0	unmethylated (<10%)	Q8TDB6	E3 ubiquitin-protein ligase DTX3L (EC 2.3.2.27) (B-lymphoma- and BAL-associated protein) (Protein deltex-3-like) (RING-type E3 ubiquitin transferase DTX3L) (Rhysin-2) (Rhysin2)	DNA damage checkpoint signaling [GO:0000077]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; endosome to lysosome transport [GO:0008333]; negative regulation of ubiquitin-protein transferase activity [GO:0051444]; Notch signaling pathway [GO:0007219]; positive regulation of chromatin binding [GO:0035563]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein binding [GO:0032092]; positive regulation of protein localization to early endosome [GO:1902966]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of receptor catabolic process [GO:2000646]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN004450	Chromosome_1A	1582	4	14	34.576485461441216	0.2960883398839603	95.71428571428571	14	1	95.95645412130638	12	1	94.9238578680203	2	1	92.80500521376433	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003120	Chromosome_1A	9273	4	213	36.385204356734604	0.694555447717107	68.49604809083824	162	0.7592592592592593	65.00691562932226	23	0.6956521739130435	69.16545044447393	139	0.7697841726618705	0.684931506849315	42	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003121	Chromosome_1A	1486	4	17	33.64737550471063	0.4042502120305324	37.854609929078016	17	0.35294117647058826	45.369127516778526	11	0.45454545454545453	23.237597911227155	6	0.16666666666666666	51.086493395824455	30	0.6	sparse (10-50%)	Q567I9	Cytochrome b5 domain-containing protein 1	cilium movement [GO:0003341]; regulation of cilium beat frequency [GO:0003356]	hit with GO BP
GN003110	Chromosome_1A	4152	4	55	33.935452793834294	0.4601453217752953	76.02631578947368	53	0.8679245283018868	63.38582677165354	4	0.75	76.93175408911449	49	0.8775510204081632	31.976401179941004	24	0.3333333333333333	methylated (>=50%)	A2BIG9	N-alpha-acetyltransferase 38, NatC auxiliary subunit (LSM domain-containing protein 1)	negative regulation of apoptotic process [GO:0043066]	hit with GO BP
GN003111	Chromosome_1A	2813	3	29	44.329896907216494	0.216028197509679	26.821862348178136	29	0.3103448275862069	29.171270718232044	27	0.3333333333333333	1.2048192771084338	2	0	0.5084745762711864	70	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004453	Chromosome_1A	1112	4	37	39.83812949640288	0.8386465552384835	0.6269592476489029	37	0	0.8213552361396304	28	0	0	9	0	23.25179856115108	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003113	Chromosome_1A	46120	19	449	34.81352992194276	0.3227570607802387	56.71489437244807	397	0.6020151133501259	81.5848492399701	84	0.9285714285714286	51.32566553269615	313	0.5143769968051118	26.18577075098814	17	0.23529411764705882	methylated (>=50%)	Q91845	Ephrin type-A receptor 4-A (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK-1) (xSEK-1)	axon guidance [GO:0007411]; ephrin receptor signaling pathway [GO:0048013]; regulation of GTPase activity [GO:0043087]	hit with GO BP
GN004454	Chromosome_1A	4674	6	142	40.30808729139923	0.7480760127138703	1.7782168436651025	142	0	1.7690875232774674	114	0	1.8137847642079807	28	0	4.080351537978657	47	0	unmethylated (<10%)	P47743	Metabotropic glutamate receptor 8 (mGluR8)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; chemical synaptic transmission [GO:0007268]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of neurotransmitter secretion [GO:0046928]; regulation of synaptic transmission, glutamatergic [GO:0051966]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN004455	Chromosome_1A	4684	4	157	40.75576430401367	0.8076589370006964	2.0645952575633686	157	0	1.9036697247706422	147	0	3.3834586466165413	10	0	2.944015444015444	47	0	unmethylated (<10%)	P97772	Metabotropic glutamate receptor 1 (mGluR1)	calcium-mediated signaling [GO:0019722]; cellular response to electrical stimulus [GO:0071257]; chemical synaptic transmission [GO:0007268]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; G protein-coupled receptor signaling pathway [GO:0007186]; L-glutamate import across plasma membrane [GO:0098712]; locomotory behavior [GO:0007626]; phospholipase C-activating G protein-coupled glutamate receptor signaling pathway [GO:0007206]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of MAPK cascade [GO:0043410]; regulation of sensory perception of pain [GO:0051930]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of pain [GO:0019233]; synaptic signaling via neuropeptide [GO:0099538]	hit with GO BP
GN004456	Chromosome_1A	498	1	14	37.95180722891566	0.7817896389324961	0.690846286701209	14	0	0.690846286701209	14	0	NA	NA	NA	1.0323010323010322	60	0	unmethylated (<10%)	P54245	Ligand-gated ion channel 4	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN004457	Chromosome_1A	719	2	29	49.65229485396384	0.6550326715255089	0.1996007984031936	27	0	0.20491803278688525	26	0	0	1	0	2.922374429223744	44	0	unmethylated (<10%)	O93603	Thyrotropin-releasing hormone receptor (TRH-R) (Thyroliberin receptor)	phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]	hit with GO BP
GN004458	Chromosome_1A	12440	14	136	35.31350482315113	0.3523895814457254	73.91520576899167	136	0.8161764705882353	73.23462414578587	34	0.7941176470588235	74.1052966438683	102	0.8235294117647058	20.052770448548813	21	0.09523809523809523	methylated (>=50%)	Q9QXA6	b(0,+)-type amino acid transporter 1 (b(0,+)AT1) (Glycoprotein-associated amino acid transporter b0,+AT1) (Solute carrier family 7 member 9)	amino acid transmembrane transport [GO:0003333]; amino acid transport [GO:0006865]; L-cystine transport [GO:0015811]; neutral amino acid transport [GO:0015804]	hit with GO BP
GN004459	Chromosome_1A	2205	1	78	39.27437641723356	0.9175099891706188	0.5285761480013215	78	0	0.5285761480013215	78	0	NA	NA	NA	0.9065550906555091	39	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN004460	Chromosome_1A	4170	5	116	36.642685851318944	0.8493244488925176	0.6663890045814244	116	0	0.8831521739130435	89	0	0.32292787944025836	27	0	0.41273584905660377	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003100	Chromosome_1A	1071	4	29	37.44164332399627	0.7726119402985074	0.7518796992481203	29	0	1.0175763182238668	21	0	0.1941747572815534	8	0	0.5622489959839357	47	0	unmethylated (<10%)	P51909	Apolipoprotein D (Apo-D) (ApoD)	brain development [GO:0007420]; glucose metabolic process [GO:0006006]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of lipoprotein lipid oxidation [GO:0060588]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of smooth muscle cell-matrix adhesion [GO:2000098]; negative regulation of T cell migration [GO:2000405]; peripheral nervous system axon regeneration [GO:0014012]; response to axon injury [GO:0048678]; response to reactive oxygen species [GO:0000302]; tissue regeneration [GO:0042246]	hit with GO BP
GN004461	Chromosome_1A	7992	11	97	33.308308308308305	0.4407143307881618	82.30697674418604	97	0.9381443298969072	85.78042328042328	31	0.9354838709677419	80.947450168263	66	0.9393939393939394	NA	NA	NA	methylated (>=50%)	Q80V03	Uncharacterized aarF domain-containing protein kinase 5 (EC 2.7.11.-)	NA	hit, no GO BP
GN004462	Chromosome_1A	13811	6	191	34.24082253276374	0.4730729266235995	81.37028483448806	169	0.893491124260355	78.3166904422254	13	0.8461538461538461	81.59116706222268	156	0.8974358974358975	65.32272979471055	62	0.7258064516129032	methylated (>=50%)	P12815	Programmed cell death protein 6 (ALG-257) (Apoptosis-linked gene 2 protein) (ALG-2) (PMP41)	apoptotic process [GO:0006915]; cellular response to heat [GO:0034605]; COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of TOR signaling [GO:0032007]; negative regulation of vascular endothelial growth factor receptor signaling pathway [GO:0030948]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; positive regulation of angiogenesis [GO:0045766]; positive regulation of apoptotic process [GO:0043065]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of protein monoubiquitination [GO:1902527]; response to calcium ion [GO:0051592]; vascular endothelial growth factor receptor-2 signaling pathway [GO:0036324]	hit with GO BP
GN004463	Chromosome_1A	1338	5	39	39.46188340807175	0.7492354300974916	1.249442213297635	39	0	1.4781966001478197	23	0	0.9009009009009009	16	0	1.071667782987274	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004464	Chromosome_1A	360	1	9	44.44444444444444	0.5091137649277184	0.7194244604316546	9	0	0.7194244604316546	9	0	NA	NA	NA	0.6636250518457072	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003093	Chromosome_1A	17248	7	188	35.47077922077922	0.3466608138375932	78.52244389027432	181	0.8839779005524862	82.42924528301887	19	0.9473684210526315	78.14494074749317	162	0.8765432098765432	77.90241166573192	45	1	methylated (>=50%)	Q5RFD6	Carboxypeptidase M (CPM) (EC 3.4.17.12)	peptide metabolic process [GO:0006518]; protein processing [GO:0016485]	hit with GO BP
GN004465	Chromosome_1A	16969	10	135	33.75567210796158	0.280706860044505	49.694636218799786	135	0.4222222222222222	42.35569422776911	36	0.4166666666666667	51.2	99	0.42424242424242425	37.75122216186855	33	0.36363636363636365	sparse (10-50%)	Q9UBE8	Serine/threonine-protein kinase NLK (EC 2.7.11.24) (Nemo-like kinase) (Protein LAK1)	cellular response to osmotic stress [GO:0071470]; intracellular signal transduction [GO:0035556]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of Wnt signaling pathway [GO:0030178]; peptidyl-threonine phosphorylation [GO:0018107]; positive regulation of receptor signaling pathway via STAT [GO:1904894]; protein phosphorylation [GO:0006468]; protein stabilization [GO:0050821]; regulation of DNA-templated transcription [GO:0006355]; transforming growth factor beta receptor signaling pathway [GO:0007179]; Wnt signaling pathway, calcium modulating pathway [GO:0007223]	hit with GO BP
GN004466	Chromosome_1A	24165	15	240	37.603972687771574	0.2811399479331686	81.28844723855877	239	0.9079497907949791	85.0253807106599	26	0.9230769230769231	80.96392623613254	213	0.9061032863849765	36.322463768115945	34	0.4411764705882353	methylated (>=50%)	P18887	DNA repair protein XRCC1 (X-ray repair cross-complementing protein 1)	base-excision repair [GO:0006284]; double-strand break repair [GO:0006302]; double-strand break repair via nonhomologous end joining [GO:0006303]; negative regulation of protection from non-homologous end joining at telomere [GO:1905765]; negative regulation of protein ADP-ribosylation [GO:0010836]; regulation of base-excision repair [GO:1905051]; regulation of DNA repair [GO:0006282]; response to hydroperoxide [GO:0033194]; single strand break repair [GO:0000012]; telomeric DNA-containing double minutes formation [GO:0061819]	hit with GO BP
GN004467	Chromosome_1A	2984	4	51	35.187667560321714	0.5548976139081734	69.90378833433554	51	0.7843137254901961	63.57827476038339	4	0.75	70.56090275472951	47	0.7872340425531915	0.5277044854881267	22	0	methylated (>=50%)	Q5ZMA2	Pre-mRNA-processing factor 19 (EC 2.3.2.27) (PRP19/PSO4 homolog) (RING-type E3 ubiquitin transferase PRP19)	mRNA splicing, via spliceosome [GO:0000398]; protein K63-linked ubiquitination [GO:0070534]	hit with GO BP
GN004468	Chromosome_1A	3536	9	32	34.61538461538461	0.3028337133742279	89.43488943488944	32	1	95.29569892473118	20	1	84.50226244343891	12	1	75.1147842056933	16	0.875	methylated (>=50%)	Q99KP6	Pre-mRNA-processing factor 19 (EC 2.3.2.27) (Nuclear matrix protein 200) (PRP19/PSO4 homolog) (RING-type E3 ubiquitin transferase PRP19) (Senescence evasion factor)	DNA damage checkpoint signaling [GO:0000077]; double-strand break repair via nonhomologous end joining [GO:0006303]; inner cell mass cell proliferation [GO:0001833]; intracellular protein localization [GO:0008104]; lipid biosynthetic process [GO:0008610]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of neuron differentiation [GO:0045665]; positive regulation of astrocyte differentiation [GO:0048711]; positive regulation of mRNA splicing, via spliceosome [GO:0048026]; positive regulation of neuron differentiation [GO:0045666]; proteasomal protein catabolic process [GO:0010498]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]; regulation of neuron differentiation [GO:0045664]; spliceosomal complex assembly [GO:0000245]; spliceosomal tri-snRNP complex assembly [GO:0000244]	hit with GO BP
GN004469	Chromosome_1A	1382	3	13	33.28509406657019	0.3398532082324455	47.21030042918455	13	0.3076923076923077	57.77262180974478	9	0.3333333333333333	30.223880597014926	4	0.25	0.8766014834794336	68	0	sparse (10-50%)	Q8N9F7	Lysophospholipase D GDPD1 (EC 3.1.4.-) (Glycerophosphodiester phosphodiesterase 4) (Glycerophosphodiester phosphodiesterase domain-containing protein 1)	glycerophospholipid catabolic process [GO:0046475]; N-acylethanolamine metabolic process [GO:0070291]	hit with GO BP
GN003077	Chromosome_1A	306	1	3	43.4640522875817	0.2078804347826087	0	3	0	0	3	0	NA	NA	NA	0.6230529595015576	56	0	NA	Q9CUX1	52 kDa repressor of the inhibitor of the protein kinase (p52rIPK) (58 kDa interferon-induced protein kinase-interacting protein) (p58IPK-interacting protein) (THAP domain-containing protein 0) (THAP domain-containing protein 12)	NA	hit, no GO BP
GN004470	Chromosome_1A	384	1	13	44.270833333333336	0.7102005975245412	1.0771992818671454	13	0	1.0771992818671454	13	0	NA	NA	NA	0.4267804747932782	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003073	Chromosome_1A	384	1	14	42.708333333333336	0.8170212765957446	0.2506265664160401	14	0	0.2506265664160401	14	0	NA	NA	NA	0.3902439024390244	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003076	Chromosome_1A	516	1	9	44.18604651162791	0.3664772727272727	0.3875968992248062	9	0	0.3875968992248062	9	0	NA	NA	NA	0.7506702412868632	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003074	Chromosome_1A	384	1	14	45.3125	0.7218045112781954	2.0044543429844097	14	0	2.0044543429844097	14	0	NA	NA	NA	0.6782215523737755	44	0	unmethylated (<10%)	Q9BXJ4	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN004472	Chromosome_1A	348	1	13	44.54022988505747	0.7647058823529411	1.0025062656641603	13	0	1.0025062656641603	13	0	NA	NA	NA	0.47332185886402756	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004473	Chromosome_1A	513	1	8	43.66471734892787	0.3429144385026738	1.1857707509881423	8	0	1.1857707509881423	8	0	NA	NA	NA	0.4106776180698152	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004474	Chromosome_1A	285	1	4	44.21052631578947	0.2872983870967742	0	4	0	0	4	0	NA	NA	NA	1.0459299681673488	54	0	NA	Q9CUX1	52 kDa repressor of the inhibitor of the protein kinase (p52rIPK) (58 kDa interferon-induced protein kinase-interacting protein) (p58IPK-interacting protein) (THAP domain-containing protein 0) (THAP domain-containing protein 12)	NA	hit, no GO BP
GN004471	Chromosome_1A	384	1	14	44.270833333333336	0.747809152872444	0.43103448275862066	14	0	0.43103448275862066	14	0	NA	NA	NA	0.7446342531756461	44	0	unmethylated (<10%)	Q9BXJ4	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN003075	Chromosome_1A	268	1	9	45.52238805970149	0.6568627450980392	0.7782101167315175	9	0	0.7782101167315175	9	0	NA	NA	NA	0.36481556546412647	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004475	Chromosome_1A	384	1	11	44.791666666666664	0.5806185567010309	0.7677543186180422	11	0	0.7677543186180422	11	0	NA	NA	NA	0.7332722273143905	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003079	Chromosome_1A	1752	6	27	34.76027397260274	0.5156985871271585	17.97423887587822	25	0	20.346820809248555	14	0	15.539739027283511	11	0	13.211524947294448	37	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003080	Chromosome_1A	1122	1	12	37.78966131907308	0.3017480950246526	54.71976401179941	12	0.75	54.71976401179941	12	0.75	NA	NA	NA	25.485284909204758	25	0.24	methylated (>=50%)	Q9CR14	E3 ubiquitin-protein ligase FANCL (EC 2.3.2.27) (Fanconi anemia group L protein homolog) (Proliferation of germ cells protein) (RING-type E3 ubiquitin transferase FANCL)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; gamete generation [GO:0007276]; interstrand cross-link repair [GO:0036297]; protein monoubiquitination [GO:0006513]; regulation of cell population proliferation [GO:0042127]; single fertilization [GO:0007338]	hit with GO BP
GN004477	Chromosome_1A	711	2	6	33.614627285513365	0.3077922077922078	91.85606060606061	6	1	91.29213483146067	4	1	93.02325581395348	2	1	14.329454990814451	26	0.15384615384615385	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004478	Chromosome_1A	440	2	19	40.90909090909091	1.0341415141019297	0.8739076154806492	19	0	0.8759124087591241	17	0	0.8620689655172413	2	0	0.8659638554216867	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004479	Chromosome_1A	150	1	8	49.333333333333336	0.8823529411764706	0.22371364653243847	8	0	0.22371364653243847	8	0	NA	NA	NA	0.33738191632928477	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004480	Chromosome_1A	3070	6	21	33.32247557003257	0.24991084303722885	87.65527950310559	21	0.9523809523809523	82.37288135593221	4	1	89.2245720040282	17	0.9411764705882353	88.24096385542168	29	1	methylated (>=50%)	B3DLE8	Protein Spindly (Coiled-coil domain-containing protein 99) (Spindle apparatus coiled-coil domain-containing protein 1)	establishment of mitotic spindle orientation [GO:0000132]; mitotic metaphase chromosome alignment [GO:0007080]; mitotic spindle assembly checkpoint signaling [GO:0007094]; protein localization to kinetochore [GO:0034501]	hit with GO BP
GN004481	Chromosome_1A	1511	4	14	34.348113831899404	0.31696134252322444	86.22174381054897	14	1	86.82284040995607	10	1	84.55284552845528	4	1	35.34136546184739	27	0.4074074074074074	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004482	Chromosome_1A	2709	3	78	36.24953857511997	0.8812144212523719	0.6108424535505218	78	0	0.4166666666666667	16	0	0.6544094733561857	62	0	2.6315789473684212	48	0	unmethylated (<10%)	A1ZA47	PDZ and LIM domain protein Zasp (Z band alternatively spliced PDZ-motif protein)	actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]; myofibril assembly [GO:0030239]; regulation of cell-matrix adhesion [GO:0001952]	hit with GO BP
GN004483	Chromosome_1A	336	1	9	42.55952380952381	0.5981012658227848	0.8385744234800838	9	0	0.8385744234800838	9	0	NA	NA	NA	0.5367464905037159	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002633	Chromosome_1A	2136	3	37	34.50374531835206	0.5821878453038674	25.033692722371967	36	0.08333333333333333	40.63400576368876	4	0.25	22.968332697443724	32	0.0625	1.0320478001086366	25	0	sparse (10-50%)	Q4FZX7	Signal recognition particle receptor subunit beta (SR-beta)	protein targeting to ER [GO:0045047]	hit with GO BP
GN003066	Chromosome_1A	321	1	11	44.23676012461059	0.7118951612903226	0.23529411764705882	11	0	0.23529411764705882	11	0	NA	NA	NA	0.572737686139748	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003065	Chromosome_1A	921	2	36	34.41910966340934	1.319904458598726	0.38095238095238093	36	0	0.4658385093167702	20	0	0.322234156820623	16	0	0.49157303370786515	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004484	Chromosome_1A	3210	2	87	39.190031152647975	0.7078154463796914	0.47796070100902815	87	0	0.49889135254988914	84	0	0	3	0	0.9209344115004492	63	0	unmethylated (<10%)	Q19187	Receptor-type guanylate cyclase gcy-12 (EC 4.6.1.2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; negative regulation of dauer larval development [GO:0061067]; negative regulation of multicellular organism growth [GO:0040015]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of locomotion involved in locomotory behavior [GO:0090325]; regulation of multicellular organism growth [GO:0040014]	hit with GO BP
GN003063	Chromosome_1A	4716	4	53	34.01187446988974	0.39158144081816815	89.83616504854369	52	0.9807692307692307	85.49382716049382	11	0.9090909090909091	90.8987915407855	41	1	2.9166666666666665	39	0	methylated (>=50%)	Q29HY3	Cdc42 homolog (EC 3.6.5.2)	ameboidal-type cell migration [GO:0001667]; anatomical structure morphogenesis [GO:0009653]; cellular process involved in reproduction in multicellular organism [GO:0022412]; developmental process involved in reproduction [GO:0003006]; epithelium development [GO:0060429]; hemocyte migration [GO:0035099]; maintenance of protein location [GO:0045185]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]; positive regulation of protein kinase activity [GO:0045860]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN003062	Chromosome_1A	2414	3	36	35.87406793703397	0.46622317596566526	65.20479933802234	36	0.8055555555555556	37.587238285144565	14	0.5	84.7949080622348	22	1	2.347417840375587	8	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004485	Chromosome_1A	1079	2	10	37.442075996292864	0.27522701765126006	77.96817625458996	10	1	78.26666666666667	9	1	74.6268656716418	1	1	76.04306864064603	16	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004486	Chromosome_1A	28656	15	423	35.78308207705193	0.4612660739770064	86.81858497646176	415	0.9662650602409638	92.12158808933002	32	1	86.50999927803046	383	0.9634464751958225	87.29952319029042	34	1	methylated (>=50%)	P78364	Polyhomeotic-like protein 1 (hPH1) (Early development regulatory protein 1)	chromatin remodeling [GO:0006338]; heterochromatin formation [GO:0031507]; negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN004487	Chromosome_1A	348	1	25	50	1.1500330469266358	0.49800796812749004	25	0	0.49800796812749004	25	0	NA	NA	NA	1.918623883559378	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003059	Chromosome_1A	1785	5	53	37.53501400560224	0.8477150537634408	0.35810205908683973	53	0	0.3225806451612903	16	0	0.37174721189591076	37	0	11.28802957065681	70	0	unmethylated (<10%)	P32320	Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)	cellular response to external biotic stimulus [GO:0071217]; CMP catabolic process [GO:0006248]; cytosine metabolic process [GO:0019858]; dCMP catabolic process [GO:0006249]; deoxycytidine catabolic process [GO:0006217]; pyrimidine-containing compound salvage [GO:0008655]; UMP salvage [GO:0044206]; uridine biosynthetic process [GO:0046109]	hit with GO BP
GN003058	Chromosome_1A	210	1	4	40.95238095238095	0.4666666666666667	0	4	0	0	4	0	NA	NA	NA	1.445578231292517	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003057	Chromosome_1A	150	1	6	55.333333333333336	0.5402160864345739	0	3	0	0	3	0	NA	NA	NA	0.45118949958982774	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003054	Chromosome_1A	912	1	19	39.80263157894737	0.5285182699932898	0.7891770011273957	19	0	0.7891770011273957	19	0	NA	NA	NA	0.9774436090225563	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003052	Chromosome_1A	1428	1	27	41.036414565826334	0.449637896651856	2.977667493796526	24	0	2.977667493796526	24	0	NA	NA	NA	12.051592099959693	23	0.30434782608695654	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN004491	Chromosome_1A	7104	9	82	32.9954954954955	0.425098972149146	89.02983741289977	80	1	92.73144605967866	22	1	87.9020979020979	58	1	64.46199407699902	18	0.8888888888888888	methylated (>=50%)	Q28IA3	AKT-interacting protein (Fused toes protein homolog)	early endosome to late endosome transport [GO:0045022]; endosome organization [GO:0007032]; endosome to lysosome transport [GO:0008333]; lysosome organization [GO:0007040]	hit with GO BP
GN004492	Chromosome_1A	1326	1	26	40.64856711915535	0.47467988434531183	0.7159904534606205	26	0	0.7159904534606205	26	0	NA	NA	NA	0.4460492778249788	64	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN004493	Chromosome_1A	8079	8	105	33.7913108057928	0.45651829958712375	84.42383432854784	105	0.8666666666666667	66.94402420574886	25	0.64	87.95235913879982	80	0.9375	0.976709241172051	68	0	methylated (>=50%)	A4IFH5	Alanine aminotransferase 1 (ALT1) (EC 2.6.1.2) (Glutamate pyruvate transaminase) (Glutamate pyruvate transaminase 1) (GPT-1) (Glutamic--alanine transaminase 1) (Glutamic--pyruvic transaminase 1)	L-alanine catabolic process [GO:0042853]	hit with GO BP
GN004494	Chromosome_1A	1188	4	14	36.36363636363637	0.35798536375376666	79.35174069627851	14	1	76.03305785123968	6	1	81.91489361702128	8	1	85.82857142857142	27	1	methylated (>=50%)	Q6NYL5	Alanine aminotransferase 2-like (ALT2) (EC 2.6.1.2) (Glutamate pyruvate transaminase 2) (GPT 2) (Glutamic--alanine transaminase 2) (Glutamic--pyruvic transaminase 2)	2-oxoglutarate metabolic process [GO:0006103]; L-alanine catabolic process [GO:0042853]	hit with GO BP
GN003048	Chromosome_1A	1894	5	13	32.734952481520594	0.25817072275639347	20.875912408759124	9	0	21.27659574468085	8	0	17.56756756756757	1	0	29.14960250542038	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003620	Chromosome_1A	382	1	12	45.81151832460733	0.5992156862745098	1.0101010101010102	12	0	1.0101010101010102	12	0	NA	NA	NA	0.6542056074766355	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003047	Chromosome_1A	1602	2	42	53.87016229712859	0.3617224880382775	1.5037593984962405	27	0	1.5037593984962405	27	0	NA	NA	NA	0.6353021978021978	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004496	Chromosome_1A	320	2	4	51.5625	0.18823529411764706	0	3	0	0	3	0	NA	NA	NA	2.801235839340886	100	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004497	Chromosome_1A	249	1	12	43.77510040160642	1.006060606060606	1.1764705882352942	12	0	1.1764705882352942	12	0	NA	NA	NA	0.6654428636989445	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004498	Chromosome_1A	432	1	12	39.120370370370374	0.7280898876404495	0.46425255338904364	12	0	0.46425255338904364	12	0	NA	NA	NA	0.4065040650406504	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004499	Chromosome_1A	369	1	3	39.295392953929536	0.2181710681907765	93.27731092436974	3	1	93.27731092436974	3	1	NA	NA	NA	93.00361881785284	10	1	NA	Q58DN7	Malonate--CoA ligase ACSF3, mitochondrial (EC 6.2.1.76) (Acyl-CoA synthetase family member 3)	fatty acid biosynthetic process [GO:0006633]; malonate catabolic process [GO:0090410]	hit with GO BP
GN004500	Chromosome_1A	1794	3	23	37.34671125975474	0.36941340782122906	90.80717488789237	23	1	92.23946784922394	7	1	90.07891770011274	16	1	72.3719165085389	38	0.9210526315789473	methylated (>=50%)	Q6GLK6	Malonate--CoA ligase ACSF3, mitochondrial (EC 6.2.1.76) (Acyl-CoA synthetase family member 3)	fatty acid biosynthetic process [GO:0006633]; malonate catabolic process [GO:0090410]	hit with GO BP
GN004501	Chromosome_1A	738	1	8	39.43089430894309	0.27896427896427894	90.20172910662824	8	1	90.20172910662824	8	1	NA	NA	NA	7.166666666666667	31	0.0967741935483871	methylated (>=50%)	Q6GLK6	Malonate--CoA ligase ACSF3, mitochondrial (EC 6.2.1.76) (Acyl-CoA synthetase family member 3)	fatty acid biosynthetic process [GO:0006633]; malonate catabolic process [GO:0090410]	hit with GO BP
GN003043	Chromosome_1A	16142	14	200	36.64353859496964	0.36959215041406823	82.10492175464202	199	0.9346733668341709	91.54034229828851	39	0.9743589743589743	80.22939346811819	160	0.925	83.90625	17	1	methylated (>=50%)	Q9H4Z3	mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase (EC 2.1.1.62) (Cap-specific adenosine methyltransferase) (CAPAM) (hCAPAM) (Phosphorylated CTD-interacting factor 1) (hPCIF1) (Protein phosphatase 1 regulatory subunit 121)	mRNA processing [GO:0006397]; negative regulation of translation [GO:0017148]; positive regulation of translation [GO:0045727]	hit with GO BP
GN004502	Chromosome_1A	1332	1	60	42.04204204204204	1.0198560563524066	1.0427010923535254	60	0	1.0427010923535254	60	0	NA	NA	NA	1.3717421124828533	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004503	Chromosome_1A	2397	3	64	34.54317897371715	0.8973589541107309	0.7124198527665637	64	0	0.4921259842519685	24	0	0.7824726134585289	40	0	0.3515413737155219	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004504	Chromosome_1A	580	2	25	42.41379310344828	0.9728931830381106	0.872093023255814	25	0	1.0909090909090908	21	0	0	4	0	2.0019691499835903	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004505	Chromosome_1A	576	1	38	50.69444444444444	1.14	1.2820512820512822	13	0	1.2820512820512822	13	0	NA	NA	NA	1.027221366204417	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003036	Chromosome_1A	13169	8	160	37.61864985951857	0.3470656379750793	86.78864523072784	149	0.9664429530201343	92.83783783783784	12	1	86.11982668459585	137	0.9635036496350365	70.43243243243244	49	0.8571428571428571	methylated (>=50%)	Q2L969	Metaxin-2 (Mitochondrial outer membrane import complex protein 2)	mitochondrial transport [GO:0006839]	hit with GO BP
GN003037	Chromosome_1A	8251	5	120	35.21997333656527	0.469054448726482	81.947261663286	120	0.9166666666666666	52.68817204301075	4	0.75	82.7575938058368	116	0.9224137931034483	63.96411937208901	55	0.7090909090909091	methylated (>=50%)	Q96CD2	Phosphopantothenoylcysteine decarboxylase (PPC-DC) (EC 4.1.1.36) (CoaC)	coenzyme A biosynthetic process [GO:0015937]	hit with GO BP
GN003038	Chromosome_1A	3801	8	48	32.96500920810313	0.4648356687898089	77.34806629834254	46	0.9130434782608695	73.23628219484883	15	0.9333333333333333	78.79025923016496	31	0.9032258064516129	86.0372340425532	30	1	methylated (>=50%)	Q9DAM1	Leucine-rich repeat-containing protein 34	gene expression [GO:0010467]; telomere maintenance [GO:0000723]	hit with GO BP
GN004507	Chromosome_1A	639	1	33	47.26134585289515	0.9289018104929299	96.1744966442953	32	1	96.1744966442953	32	1	NA	NA	NA	96.89283449587825	48	1	methylated (>=50%)	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN004508	Chromosome_1A	25322	15	419	34.11657846931522	0.5698413358258311	93.15443941615145	406	0.9950738916256158	96.13365155131265	32	1	92.94129699825838	374	0.9946524064171123	96.39837143751957	63	1	methylated (>=50%)	P97329	Kinesin-like protein KIF20A (Kinesin-like protein 174) (Rab6-interacting kinesin-like protein) (Rabkinesin-6)	microtubule bundle formation [GO:0001578]; microtubule-based movement [GO:0007018]; midbody abscission [GO:0061952]; mitotic cytokinesis [GO:0000281]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN003041	Chromosome_1A	2534	2	14	37.68745067087608	0.16207523551072248	94.49003516998827	14	1	94.49003516998827	14	1	NA	NA	NA	82.41500586166471	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004510	Chromosome_1A	774	1	20	40.69767441860465	0.6517894736842105	94.44072337575352	20	1	94.44072337575352	20	1	NA	NA	NA	74.6987951807229	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004511	Chromosome_1A	552	1	9	39.67391304347826	0.42790697674418604	55.86206896551724	9	0.5555555555555556	55.86206896551724	9	0.5555555555555556	NA	NA	NA	91.54676258992805	20	1	methylated (>=50%)	Q6NRV0	E3 ubiquitin-protein ligase TRAIP (EC 2.3.2.27) (TRAF-interacting protein)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; interstrand cross-link repair [GO:0036297]; protein ubiquitination [GO:0016567]; protein-DNA covalent cross-linking repair [GO:0106300]; replication fork processing [GO:0031297]	hit with GO BP
GN004512	Chromosome_1A	28585	31	391	36.58212349134161	0.4093566491102206	84.98533724340176	351	0.9373219373219374	86.18549967341607	51	0.9019607843137255	84.79296445584463	300	0.9433333333333334	34.71882640586797	39	0.38461538461538464	methylated (>=50%)	O00411	DNA-directed RNA polymerase, mitochondrial (MtRPOL) (EC 2.7.7.6)	mitochondrial DNA replication [GO:0006264]; mitochondrial transcription [GO:0006390]; transcription initiation at mitochondrial promoter [GO:0006391]	hit with GO BP
GN004513	Chromosome_1A	1660	2	28	41.08433734939759	0.39973511528505207	94.06991260923846	28	1	94.06991260923846	28	1	NA	NA	NA	30.72289156626506	25	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003031	Chromosome_1A	3293	3	37	37.04828423929548	0.32983843896522974	86.93931398416886	37	1	80.66914498141264	5	1	87.78054862842893	32	1	64.54545454545455	8	0.875	methylated (>=50%)	Q9M9E8	Lysine-specific demethylase JMJ21 (EC 1.14.11.-) (F-box protein JMJ21) (Jumonji domain-containing protein 21) (AtJMJ21) (Protein JUMONJI 21) (Lysine-specific histone demethylase JMJ21) ([histone H3]-trimethyl-L-lysine monodemethylase JMJ21)	NA	hit, no GO BP
GN004514	Chromosome_1A	3105	6	53	35.61996779388084	0.5437055832532138	5.258964143426295	53	0	5.806451612903226	25	0	4.842105263157895	28	0	1.3728963684676705	68	0	unmethylated (<10%)	O14734	Acyl-coenzyme A thioesterase 8 (Acyl-CoA thioesterase 8) (EC 3.1.2.1) (EC 3.1.2.11) (EC 3.1.2.2) (EC 3.1.2.3) (EC 3.1.2.5) (Choloyl-coenzyme A thioesterase) (EC 3.1.2.27) (HIV-Nef-associated acyl-CoA thioesterase) (Peroxisomal acyl-CoA thioesterase 2) (PTE-2) (Peroxisomal acyl-coenzyme A thioester hydrolase 1) (PTE-1) (Peroxisomal long-chain acyl-CoA thioesterase 1) (Thioesterase II) (hACTE-III) (hACTEIII) (hTE)	acyl-CoA metabolic process [GO:0006637]; alpha-linolenic acid metabolic process [GO:0036109]; bile acid biosynthetic process [GO:0006699]; dicarboxylic acid catabolic process [GO:0043649]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid biosynthetic process [GO:0006633]; fatty acid catabolic process [GO:0009062]; negative regulation of glycoprotein biosynthetic process [GO:0010561]; peroxisome fission [GO:0016559]	hit with GO BP
GN003023	Chromosome_1A	1734	3	59	40.253748558246826	0.8429960448253131	0.552956188855806	59	0	0.58679706601467	53	0	0.32679738562091504	6	0	0.5642885933091495	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003022	Chromosome_1A	1469	2	54	42.54594962559565	0.812466713097628	0.7000538502961766	54	0	0.6802721088435374	50	0	0.8333333333333334	4	0	0.7021891780256092	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003021	Chromosome_1A	2157	3	64	41.02920723226704	0.7079602449306133	0.5497251374312844	62	0	0.6578947368421053	42	0	0.42689434364994666	20	0	0.3382187147688839	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004516	Chromosome_1A	1438	3	44	41.23783031988874	0.7225305469909786	0.5704506560182544	44	0	0.5621486570893192	41	0	0.6578947368421053	3	0	0.5588543485854	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004517	Chromosome_1A	1539	3	54	43.20987654320987	0.7517231398230729	0.18552875695732837	54	0	0.2050580997949419	50	0	0	4	0	0.6381039197812215	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004518	Chromosome_1A	1453	3	46	41.844459738472125	0.723511582593635	0.8168028004667445	46	0	0.8136094674556213	40	0	0.8287292817679558	6	0	0.6620324395895398	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004519	Chromosome_1A	1693	3	61	44.00472533963379	0.744385019028947	0.8305647840531561	61	0	0.5333333333333333	44	0	1.3215859030837005	17	0	0.5416792055371652	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004520	Chromosome_1A	1912	2	27	51.46443514644351	0.21447890483807308	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1530815109343937	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004521	Chromosome_1A	5318	2	166	38.64234674689733	0.8387932918428429	16.7402376910017	157	0.1592356687898089	42.08754208754209	62	0.4032258064516129	2.912621359223301	95	0	0.42016806722689076	18	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003014	Chromosome_1A	18746	7	279	35.676944414808496	0.4680380276971186	85.82914023189674	276	0.9420289855072463	92.29857819905213	25	0.96	85.51605504587155	251	0.9402390438247012	0.5982905982905983	59	0	methylated (>=50%)	Q62280	Protein SSXT (Protein SYT) (Synovial sarcoma-associated Ss18-alpha)	cell morphogenesis [GO:0000902]; chromatin remodeling [GO:0006338]; cytoskeleton organization [GO:0007010]; ephrin receptor signaling pathway [GO:0048013]; intracellular signal transduction [GO:0035556]; microtubule cytoskeleton organization [GO:0000226]; negative regulation of cell differentiation [GO:0045596]; neuronal stem cell population maintenance [GO:0097150]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN003012	Chromosome_1A	35062	13	553	35.69391363869717	0.49565053831829065	83.83712143230832	519	0.9499036608863198	78.03687635574838	40	0.925	84.16559179411584	479	0.9519832985386222	3.8649706457925634	36	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003011	Chromosome_1A	15486	13	286	34.069482112876145	0.6390914820817576	43.37820005278438	286	0.45454545454545453	88.85839736553238	31	0.967741935483871	38.53880745196519	255	0.39215686274509803	4.520166898470097	50	0	sparse (10-50%)	E7F4Z4	Palmitoyltransferase ZDHHC1 (EC 2.3.1.225) (DHHC domain-containing protein 1) (Zinc finger DHHC domain-containing protein 1)	antiviral innate immune response [GO:0140374]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; protein targeting to membrane [GO:0006612]	hit with GO BP
GN004524	Chromosome_1A	4069	7	43	34.79970508724502	0.3498115659519168	92.75738876258525	43	1	91.92708333333333	8	1	92.8756957328386	35	1	94.3943943943944	51	0.9803921568627451	methylated (>=50%)	Q6P4W8	Pachytene checkpoint protein 2 homolog (Thyroid hormone receptor interactor 13 homolog) (Thyroid receptor-interacting protein 13 homolog) (TR-interacting protein 13 homolog) (TRIP-13 homolog)	double-strand break repair [GO:0006302]; meiotic recombination checkpoint signaling [GO:0051598]; oogenesis [GO:0048477]; reciprocal meiotic recombination [GO:0007131]; spermatogenesis [GO:0007283]; synaptonemal complex assembly [GO:0007130]	hit with GO BP
GN003009	Chromosome_1A	3587	6	87	35.51714524672428	0.7691107644305772	0.5666420300566642	87	0	0.4703115814226925	41	0	0.6361323155216285	46	0	0.7503126302626094	72	0	unmethylated (<10%)	Q9V5N8	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)	axon guidance [GO:0007411]; axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion mediated by cadherin [GO:0044331]; dendrite development [GO:0016358]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; morphogenesis of a polarized epithelium [GO:0001738]; mushroom body development [GO:0016319]; ommatidial rotation [GO:0016318]; positive regulation of axon extension [GO:0045773]; positive regulation of axon guidance [GO:1902669]; R3/R4 development [GO:0048057]; regulation of axonogenesis [GO:0050770]; regulation of synapse assembly [GO:0051963]; regulation of tube length, open tracheal system [GO:0035159]; segment polarity determination [GO:0007367]	hit with GO BP
GN003008	Chromosome_1A	7223	4	185	36.41146338086668	0.77630389518644	0.6197559115179252	185	0	0.4221954161640531	62	0	0.7110987172336866	123	0	0.36656891495601174	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003007	Chromosome_1A	11251	22	110	34.44138298817883	0.33109732085147187	78.6972105345177	109	0.926605504587156	82.63056092843327	52	0.9423076923076923	76.04384133611691	57	0.9122807017543859	83.58208955223881	31	0.967741935483871	methylated (>=50%)	Q96ST8	Centrosomal protein of 89 kDa (Cep89) (Centrosomal protein 123) (Cep123) (Coiled-coil domain-containing protein 123)	chemical synaptic transmission [GO:0007268]; cilium assembly [GO:0060271]; mitochondrial respiratory chain complex IV assembly [GO:0033617]; mitochondrion organization [GO:0007005]; non-motile cilium assembly [GO:1905515]	hit with GO BP
GN003005	Chromosome_1A	19142	10	397	33.80524501097064	0.7298964671829765	0.9056692542931075	342	0	0.8442776735459663	49	0	0.914470145239376	293	0	0.5622622788159418	53	0	unmethylated (<10%)	Q9HCX4	Short transient receptor potential channel 7 (TrpC7) (Transient receptor protein 7) (TRP-7) (hTRP7)	calcium ion transmembrane transport [GO:0070588]; regulation of cytosolic calcium ion concentration [GO:0051480]; single fertilization [GO:0007338]	hit with GO BP
GN003006	Chromosome_1A	8594	15	248	37.20037235280428	0.8372217263962389	0.5719379038847211	247	0	0.5470085470085471	113	0	0.5910941810061736	134	0	0.39447731755424065	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004526	Chromosome_1A	17277	33	216	34.24205591248481	0.4282735712554443	85.6672760511883	216	0.9953703703703703	87.59404041894085	119	0.9915966386554622	83.77320185614849	97	1	82.31292517006803	13	1	methylated (>=50%)	Q6YHK3	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)	negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of wound healing [GO:0061045]	hit with GO BP
GN004527	Chromosome_1A	408	1	19	50	0.7615679339817271	1.2422360248447204	19	0	1.2422360248447204	19	0	NA	NA	NA	0.746268656716418	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004528	Chromosome_1A	68694	55	806	34.75121553556351	0.391867950194744	82.28652558988574	778	0.9344473007712082	87.10139734862057	158	0.9367088607594937	81.16666666666667	620	0.9338709677419355	2.9426686960933535	55	0	methylated (>=50%)	Q9Z221	Polyamine-modulated factor 1-binding protein 1 (PMF-1-binding protein) (Outer dense fiber protein 3)	cytoskeleton organization [GO:0007010]; gene expression [GO:0010467]; intracellular protein localization [GO:0008104]; protein-containing complex assembly [GO:0065003]; regulation of protein localization [GO:0032880]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]	hit with GO BP
GN004529	Chromosome_1A	47633	16	604	34.81829823861609	0.4201679086669197	62.8082522205511	601	0.610648918469218	71.24309392265194	81	0.7530864197530864	61.842563015908155	520	0.5884615384615385	0.628722700198544	45	0	methylated (>=50%)	A0A087WPF7	Autism susceptibility gene 2 protein homolog	actin cytoskeleton organization [GO:0030036]; axon extension [GO:0048675]; dendrite extension [GO:0097484]; innate vocalization behavior [GO:0098582]; neuron migration [GO:0001764]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of transcription by RNA polymerase II [GO:0045944]; righting reflex [GO:0060013]	hit with GO BP
GN002999	Chromosome_1A	8048	4	126	34.35636182902584	0.532637470690568	87.080575211139	126	0.9444444444444444	72.38442822384428	13	0.6153846153846154	88.60201511335012	113	0.9823008849557522	34.238741958541816	22	0.3181818181818182	methylated (>=50%)	Q9H6F5	Coiled-coil domain-containing protein 86 (Cytokine-induced protein with coiled-coil domain)	chromosome segregation [GO:0007059]; mitotic nuclear division [GO:0140014]	hit with GO BP
GN003000	Chromosome_1A	17262	16	187	34.04008805468659	0.37455743137597314	80.72270825408901	187	0.9411764705882353	77.60393383996424	42	0.9047619047619048	81.36230289695636	145	0.9517241379310345	76.74479166666667	59	0.7627118644067796	methylated (>=50%)	Q80TQ5	Pleckstrin homology domain-containing family M member 2 (PH domain-containing family M member 2)	autophagosome-lysosome fusion [GO:0061909]; Golgi organization [GO:0007030]; late endosome to lysosome transport [GO:1902774]; lysosome localization [GO:0032418]; natural killer cell mediated cytotoxicity [GO:0042267]; regulation of protein localization [GO:0032880]	hit with GO BP
GN003001	Chromosome_1A	688	2	19	44.0406976744186	0.5717784970693728	8.670520231213873	19	0	8.670520231213873	19	0	NA	NA	NA	1.9574175824175823	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003002	Chromosome_1A	4832	2	138	50.186258278145694	0.4535774484636011	0	6	0	NA	NA	NA	0	6	0	0.5882352941176471	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004532	Chromosome_1A	828	1	21	38.16425120772947	0.7324655629975989	0.7822685788787483	21	0	0.7822685788787483	21	0	NA	NA	NA	0.2932551319648094	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002996	Chromosome_1A	3274	6	85	34.78924862553451	0.8580458175315265	0.39501039501039503	85	0	0.506649778340722	31	0	0.3404518724852987	54	0	1.0051993067590987	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004533	Chromosome_1A	828	1	17	38.52657004830918	0.5804536082474226	0.6359300476947536	17	0	0.6359300476947536	17	0	NA	NA	NA	0.6642066420664207	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004534	Chromosome_1A	456	1	14	41.44736842105263	0.7402597402597403	0.9157509157509157	14	0	0.9157509157509157	14	0	NA	NA	NA	0.35142522452167124	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004535	Chromosome_1A	795	1	7	40.25157232704402	0.2296644793859106	0.44052863436123346	7	0	0.44052863436123346	7	0	NA	NA	NA	1.0141987829614605	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004536	Chromosome_1A	7891	14	77	34.78646559371436	0.32389745000330505	46.93877551020408	58	0.4827586206896552	43.00847457627118	15	0.3333333333333333	48.43121480289622	43	0.5348837209302325	44.29824561403509	15	0.4666666666666667	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002989	Chromosome_1A	426	1	18	42.01877934272301	0.9580209895052474	0.2516778523489933	18	0	0.2516778523489933	18	0	NA	NA	NA	0.856911883589329	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002987	Chromosome_1A	429	1	22	41.95804195804196	1.1653290529695024	0.3669724770642202	22	0	0.3669724770642202	22	0	NA	NA	NA	0.5270092226613966	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015802	Chromosome_1A	888	1	35	44.932432432432435	0.7810222646630145	3.017543859649123	35	0	3.017543859649123	35	0	NA	NA	NA	0.5632161584773743	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004537	Chromosome_1A	600	1	23	40.5	0.9502823302575403	0	9	0	0	9	0	NA	NA	NA	0.8308605341246291	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002984	Chromosome_1A	315	1	6	45.07936507936508	0.40384615384615385	0.3076923076923077	6	0	0.3076923076923077	6	0	NA	NA	NA	0.5172413793103449	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002985	Chromosome_1A	591	1	16	39.424703891708965	0.7725490196078432	0.7142857142857143	16	0	0.7142857142857143	16	0	NA	NA	NA	0.5287508261731659	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004539	Chromosome_1A	1367	3	42	36.06437454279444	0.9455533596837945	0.26702269692923897	42	0	0.2643171806167401	27	0	0.2697841726618705	15	0	0.6264424662050775	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004540	Chromosome_1A	843	1	22	38.67141162514828	0.7338266133818699	0.4036326942482341	22	0	0.4036326942482341	22	0	NA	NA	NA	0.4329004329004329	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004541	Chromosome_1A	426	1	17	42.72300469483568	0.8746376811594203	0.9077155824508321	17	0	0.9077155824508321	17	0	NA	NA	NA	0.5500261917234154	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002988	Chromosome_1A	225	1	4	36.888888888888886	0.5514705882352942	0.3831417624521073	4	0	0.3831417624521073	4	0	NA	NA	NA	0.513225424397947	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004542	Chromosome_1A	498	1	20	42.7710843373494	0.8797032326444091	0.21668472372697725	20	0	0.21668472372697725	20	0	NA	NA	NA	0.4978501923512107	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002986	Chromosome_1A	843	1	22	38.67141162514828	0.7404183966783775	0.3418803418803419	22	0	0.3418803418803419	22	0	NA	NA	NA	0.46174142480211083	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002991	Chromosome_1A	426	1	19	42.25352112676056	0.9992592592592593	0.3927729772191673	19	0	0.3927729772191673	19	0	NA	NA	NA	1.1124657116732704	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004544	Chromosome_1A	225	1	4	38.666666666666664	0.5050505050505051	0	4	0	0	4	0	NA	NA	NA	0.6372549019607843	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004545	Chromosome_1A	429	1	20	42.19114219114219	1.0478749389350268	0.6711409395973155	20	0	0.6711409395973155	20	0	NA	NA	NA	0.6132879045996593	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001979	Chromosome_1A	1337	3	43	39.26701570680628	0.8536661420128887	0.29895366218236175	43	0	0.3429355281207133	28	0	0.18214936247723132	15	0	1.494612443517553	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004546	Chromosome_1A	192	1	5	46.354166666666664	0.5031446540880503	0	5	0	0	5	0	NA	NA	NA	0.5711565920990005	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004547	Chromosome_1A	3386	5	104	38.00945067926757	0.8563188483330496	0.8201892744479495	104	0	0.8160564622849581	100	0	0.9049773755656109	4	0	1.9321766561514195	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002952	Chromosome_1A	11458	5	325	36.62070169314016	0.8479091616814324	0.6693627109189793	311	0	0.5896805896805897	56	0	0.6825383927845942	255	0	0.7292173067574137	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004549	Chromosome_1A	613	2	16	36.8678629690049	0.7768712871287129	0.9549795361527967	16	0	0.6711409395973155	14	0	2.18978102189781	2	0	0.8921330089213301	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004550	Chromosome_1A	20046	16	257	34.725132195949314	0.4272720803710628	91.64328412833963	230	1	94.97633782307972	49	1	90.97237488092621	181	1	95.25139664804469	27	1	methylated (>=50%)	P21127	Cyclin-dependent kinase 11B (EC 2.7.11.22) (EC 2.7.11.23) (Cell division cycle 2-like protein kinase 1) (CLK-1) (Cell division protein kinase 11B) (Galactosyltransferase-associated protein kinase p58/GTA) (PITSLRE serine/threonine-protein kinase CDC2L1) (p58 CLK-1)	apoptotic process [GO:0006915]; mitotic cell cycle [GO:0000278]; mitotic sister chromatid cohesion, centromeric [GO:0071962]; protein phosphorylation [GO:0006468]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of cell growth [GO:0001558]; regulation of centrosome cycle [GO:0046605]; regulation of DNA-templated transcription [GO:0006355]; regulation of mRNA processing [GO:0050684]; regulation of mRNA splicing, via spliceosome [GO:0048024]; RNA polymerase II promoter clearance [GO:0001111]	hit with GO BP
GN002955	Chromosome_1A	845	2	11	35.26627218934911	0.4263565891472868	90.55118110236221	5	1	93.97590361445783	2	1	88.88888888888889	3	1	77.47747747747748	7	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002956	Chromosome_1A	18312	12	276	35.0698995194408	0.49108373384823106	71.92727775473524	263	0.7452471482889734	71.57534246575342	16	0.8125	71.94996320824136	247	0.7408906882591093	0.5671077504725898	59	0	methylated (>=50%)	Q5U367	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 [Includes: Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 (EC 1.14.11.4) (Lysyl hydroxylase 3) (LH3); Procollagen glycosyltransferase (EC 2.4.1.50) (EC 2.4.1.66) (Galactosylhydroxylysine-glucosyltransferase) (Procollagen galactosyltransferase) (Procollagen glucosyltransferase)]	basement membrane assembly [GO:0070831]; cellular response to hormone stimulus [GO:0032870]; collagen biosynthetic process [GO:0032964]; collagen fibril organization [GO:0030199]; collagen metabolic process [GO:0032963]; endothelial cell morphogenesis [GO:0001886]; epidermis morphogenesis [GO:0048730]; in utero embryonic development [GO:0001701]; intracellular protein localization [GO:0008104]; lung morphogenesis [GO:0060425]; neural tube development [GO:0021915]; peptidyl-lysine hydroxylation [GO:0017185]; protein O-linked glycosylation via galactose [GO:0180062]; vasodilation [GO:0042311]	hit with GO BP
GN002957	Chromosome_1A	8817	9	143	35.272768515368035	0.5242477325637238	90.34358409295803	142	1	88.48920863309353	18	1	90.54384017758046	124	1	90.90029041626332	26	1	methylated (>=50%)	Q5U367	Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 [Includes: Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 (EC 1.14.11.4) (Lysyl hydroxylase 3) (LH3); Procollagen glycosyltransferase (EC 2.4.1.50) (EC 2.4.1.66) (Galactosylhydroxylysine-glucosyltransferase) (Procollagen galactosyltransferase) (Procollagen glucosyltransferase)]	basement membrane assembly [GO:0070831]; cellular response to hormone stimulus [GO:0032870]; collagen biosynthetic process [GO:0032964]; collagen fibril organization [GO:0030199]; collagen metabolic process [GO:0032963]; endothelial cell morphogenesis [GO:0001886]; epidermis morphogenesis [GO:0048730]; in utero embryonic development [GO:0001701]; intracellular protein localization [GO:0008104]; lung morphogenesis [GO:0060425]; neural tube development [GO:0021915]; peptidyl-lysine hydroxylation [GO:0017185]; protein O-linked glycosylation via galactose [GO:0180062]; vasodilation [GO:0042311]	hit with GO BP
GN002958	Chromosome_1A	1185	3	19	33.67088607594937	0.5736598043212393	43.29395413481584	19	0.47368421052631576	63.10679611650485	4	0.75	37.876106194690266	15	0.4	22.266600099850226	34	0.2647058823529412	sparse (10-50%)	Q9GJW7	Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor-associated protein)	autophagosome assembly [GO:0000045]; autophagosome maturation [GO:0097352]; cellular response to nitrogen starvation [GO:0006995]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; mitophagy [GO:0000423]; negative regulation of TORC1 signaling [GO:1904262]; positive regulation of lysosome organization [GO:1905673]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein K48-linked ubiquitination [GO:1902524]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of Rac protein signal transduction [GO:0035020]; reticulophagy [GO:0061709]	hit with GO BP
GN002959	Chromosome_1A	871	3	30	43.74282433983927	0.7242239467849224	0.3424657534246575	30	0	0.3284072249589491	22	0	0.37453183520599254	8	0	0.43741588156123823	48	0	unmethylated (<10%)	Q28062	Brevican core protein	cell adhesion [GO:0007155]; central nervous system development [GO:0007417]; skeletal system development [GO:0001501]	hit with GO BP
GN002960	Chromosome_1A	1737	4	64	39.83880253310305	0.9297159870203726	0.7585335018963337	64	0	0.974025974025974	28	0	0.6211180124223602	36	0	0.4702194357366771	32	0	unmethylated (<10%)	Q8WPD0	Alpha-N-acetylgalactosamine-specific lectin (Alpha-N-acetylgalactosamine-binding lectin) (GalNAc-specific lectin) (Lectin) (ApL) (Tn antigen-specific lectin)	NA	hit, no GO BP
GN002961	Chromosome_1A	3155	3	47	31.79080824088748	0.5897290074210765	0.5263157894736842	47	0	0.5833333333333334	27	0	0.47244094488188976	20	0	0.41914076143904994	63	0	unmethylated (<10%)	P21941	Matrilin-1 (Cartilage matrix protein)	extracellular matrix organization [GO:0030198]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN004553	Chromosome_1A	2082	3	43	35.92699327569645	0.6400428954423593	0.5314799672935405	43	0	0.639386189258312	24	0	0.4807692307692308	19	0	0.3878474466709761	45	0	unmethylated (<10%)	A6H584	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN004554	Chromosome_1A	3000	5	44	38.333333333333336	0.40490673341492817	20.512820512820515	44	0.1590909090909091	20.623501199040767	25	0.2	20.314735336194563	19	0.10526315789473684	1.8085908063300677	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002971	Chromosome_1A	688	2	15	38.80813953488372	0.5797101449275363	0	15	0	0	14	0	0	1	0	0.8188585607940446	67	0	unmethylated (<10%)	Q60847	Collagen alpha-1(XII) chain	endodermal cell differentiation [GO:0035987]	hit with GO BP
GN002977	Chromosome_1A	2050	3	45	36.53658536585366	0.6578478214362119	0.8353808353808354	45	0	0.6802721088435374	26	0	0.9940357852882704	19	0	0.44742729306487694	43	0	unmethylated (<10%)	A6H584	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN002962	Chromosome_1A	3667	6	89	35.233160621761655	0.7820599455563224	0.4909808944391077	89	0	0.4546542234984446	44	0	0.5202312138728323	45	0	0.7905803195962994	50	0	unmethylated (<10%)	A6H584	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN004555	Chromosome_1A	1023	1	29	49.364613880742915	0.4713237163192679	0.3857280617164899	29	0	0.3857280617164899	29	0	NA	NA	NA	0.6346519991537973	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004556	Chromosome_1A	441	1	12	42.17687074829932	0.6136363636363636	0.56	12	0	0.56	12	0	NA	NA	NA	2.5192143467122117	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002975	Chromosome_1A	723	1	25	49.23928077455049	0.57777138473341	14.608695652173912	25	0	14.608695652173912	25	0	NA	NA	NA	5.6676685272649205	37	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004557	Chromosome_1A	624	1	18	47.756410256410255	0.5098039215686274	22.95566502463054	18	0	22.95566502463054	18	0	NA	NA	NA	0.9864135492276196	38	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004558	Chromosome_1A	37215	31	487	36.74324869004434	0.3885637631422191	78.39331491160901	480	0.8979166666666667	72.5284450063211	160	0.89375	80.48989921814977	320	0.9	58.92040256175663	19	0.7368421052631579	methylated (>=50%)	O75376	Nuclear receptor corepressor 1 (N-CoR) (N-CoR1)	locomotor rhythm [GO:0045475]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of fatty acid metabolic process [GO:0045922]; negative regulation of glycolytic process [GO:0045820]; negative regulation of JNK cascade [GO:0046329]; negative regulation of miRNA transcription [GO:1902894]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription initiation by RNA polymerase II [GO:0060633]; spindle assembly [GO:0051225]	hit with GO BP
GN004559	Chromosome_1A	282	1	15	43.61702127659574	1.118455843469064	58.75912408759124	13	0.6923076923076923	58.75912408759124	13	0.6923076923076923	NA	NA	NA	85.88957055214723	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002950	Chromosome_1A	1966	3	60	39.01322482197355	0.8068289079492756	0.6476683937823834	60	0	0.3669724770642202	30	0	0.8972267536704731	30	0	1.1943986820428336	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002949	Chromosome_1A	2876	5	90	39.46453407510431	0.8050910719617796	1.7806111233238073	88	0	1.0546500479386385	52	0	2.395452699959399	36	0	1.0605542251111872	56	0	unmethylated (<10%)	Q5R8I8	Phosphatidylserine decarboxylase proenzyme, mitochondrial (EC 4.1.1.65) [Cleaved into: Phosphatidylserine decarboxylase beta chain; Phosphatidylserine decarboxylase alpha chain]	lipid droplet formation [GO:0140042]; mitochondrial protein catabolic process [GO:0035694]; phosphatidylethanolamine biosynthetic process [GO:0006646]; protein autoprocessing [GO:0016540]; regulation of mitochondrion organization [GO:0010821]	hit with GO BP
GN004561	Chromosome_1A	16002	22	208	34.49568803899513	0.441481324278438	88.36255656108597	207	0.9420289855072463	88.90845070422536	40	0.925	88.25808625336927	167	0.9461077844311377	76.78640401699498	47	0.7446808510638298	methylated (>=50%)	Q5REG1	Spliceosome associated factor 3, U4/U6 recycling protein (Squamous cell carcinoma antigen recognized by T-cells 3) (SART-3)	mRNA splicing, via spliceosome [GO:0000398]; nucleosome assembly [GO:0006334]; regulation of RNA metabolic process [GO:0051252]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]; transcription elongation-coupled chromatin remodeling [GO:0140673]	hit with GO BP
GN004562	Chromosome_1A	5003	13	142	39.076554067559464	0.7435403113042459	0.6199628022318661	140	0	0.6784260515603799	65	0	0.5707762557077626	75	0	1.220472440944882	47	0	unmethylated (<10%)	Q8N0N3	Beta-1,3-glucan-binding protein (GBP)	carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]	hit with GO BP
GN004563	Chromosome_1A	12868	12	163	38.809449797948396	0.34146556674030004	85.17054604011126	160	0.94375	78.76447876447877	15	1	85.99273207796499	145	0.9379310344827586	90.79961464354528	29	1	methylated (>=50%)	F4KF65	Importin subunit alpha-9 (IMPa-9)	protein import into nucleus [GO:0006606]	hit with GO BP
GN004564	Chromosome_1A	369	1	9	51.49051490514905	0.38168026663601884	49.333333333333336	9	0.4444444444444444	49.333333333333336	9	0.4444444444444444	NA	NA	NA	91.37420718816068	39	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004565	Chromosome_1A	727	3	6	28.335625859697387	0.42727005583308847	83.88998035363458	6	1	77.77777777777777	3	1	89.47368421052632	3	1	85.05535055350553	8	0.875	methylated (>=50%)	Q5XGY9	Meiotic nuclear division protein 1 homolog	reciprocal meiotic recombination [GO:0007131]	hit with GO BP
GN004566	Chromosome_1A	1879	5	37	35.60404470463012	0.6213846483858282	0.7901668129938543	37	0	1.2474012474012475	16	0	0.45592705167173253	21	0	12.641345317483328	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004567	Chromosome_1A	2490	3	79	34.69879518072289	1.080824175824176	0.9396636993076162	77	0	0.8152806894945259	52	0	1.2408347433728144	25	0	17.903303015797032	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004568	Chromosome_1A	7856	6	97	35.67973523421588	0.3892442338595572	85.24107037604621	95	0.9789473684210527	86.72798948751642	9	1	85.09453509453509	86	0.9767441860465116	62.99524564183835	19	0.7368421052631579	methylated (>=50%)	Q4V7C6	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (GMP synthetase) (Glutamine amidotransferase)	GMP biosynthetic process [GO:0006177]; GMP salvage [GO:0032263]; response to L-cysteine [GO:1901367]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN004569	Chromosome_1A	4546	5	153	37.50549934007919	0.9572844610459499	1.0930319215004347	152	0	0.8362369337979094	31	0	1.1487303506650544	121	0	2.0675743822491177	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004570	Chromosome_1A	663	1	13	38.46153846153846	0.5646619496855346	11.424100156494523	13	0.07692307692307693	11.424100156494523	13	0.07692307692307693	NA	NA	NA	1.676963812886143	50	0	sparse (10-50%)	Q6NRW5	CDAN1-interacting nuclease 1	erythrocyte differentiation [GO:0030218]	hit with GO BP
GN002940	Chromosome_1A	15015	20	369	36.39027639027639	0.7447781508030125	3.616276261772519	369	0.008130081300813009	3.9096730704415235	137	0	3.4524929444967074	232	0.01293103448275862	1.5772870662460567	47	0	unmethylated (<10%)	Q149M9	NACHT domain- and WD repeat-containing protein 1	intracellular signal transduction [GO:0035556]	hit with GO BP
GN004573	Chromosome_1A	387	1	14	43.66925064599483	0.7588235294117647	0.646551724137931	14	0	0.646551724137931	14	0	NA	NA	NA	0.6658211794546608	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002937	Chromosome_1A	2029	7	65	38.09758501724988	0.8837937088711082	0.7858546168958742	65	0	0.7672634271099744	48	0	0.818926296633303	17	0	0.3884075291305647	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004574	Chromosome_1A	2137	4	65	38.979878334113245	0.8050503645489214	0.6944444444444444	65	0	0.37082818294190356	38	0	1.0035419126328218	27	0	0.39634146341463417	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004575	Chromosome_1A	55851	22	717	35.43177382678913	0.41112699351357346	67.5236508014313	714	0.7254901960784313	73.20980505693882	107	0.8691588785046729	66.69661154936695	607	0.700164744645799	39.78599221789883	20	0.2	methylated (>=50%)	Q66T02	Pleckstrin homology domain-containing family G member 5 (PH domain-containing family G member 5) (Synectin-binding RhoA exchange factor) (SYX)	angiogenesis [GO:0001525]; endothelial cell chemotaxis [GO:0035767]; endothelial cell migration [GO:0043542]; regulation protein catabolic process at presynapse [GO:0140251]	hit with GO BP
GN004576	Chromosome_1A	3920	5	46	37.066326530612244	0.34206452787810726	85.76337751595483	46	0.9347826086956522	84.69750889679716	39	0.9230769230769231	90.88319088319088	7	1	62.28656273199703	27	0.7037037037037037	methylated (>=50%)	F1QR43	D-glucuronyl C5-epimerase B (EC 5.1.3.17)	heparan sulfate proteoglycan biosynthetic process [GO:0015012]; heparin proteoglycan biosynthetic process [GO:0030210]	hit with GO BP
GN002934	Chromosome_1A	189	1	0	56.08465608465608	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004578	Chromosome_1A	171	1	0	58.47953216374269	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0318142734307825	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004577	Chromosome_1A	173	1	0	57.225433526011564	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8157715839564922	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004579	Chromosome_1A	1518	4	55	37.74703557312253	1.0182700751292808	0.6042296072507553	55	0	0.6018518518518519	48	0	0.6147540983606558	7	0	1.592215833701902	51	0	unmethylated (<10%)	B2GV54	Neutral cholesterol ester hydrolase 1 (NCEH) (EC 3.1.1.-) (Acetylalkylglycerol acetylhydrolase) (2-acetyl MAGE hydrolase) (EC 3.1.1.71) (Arylacetamide deacetylase-like 1)	ether lipid metabolic process [GO:0046485]; protein dephosphorylation [GO:0006470]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN002920	Chromosome_1A	3255	8	95	37.757296466973884	0.8190956770502225	43.38063969497988	95	0.2	43.53562005277045	55	0.2	43.18181818181818	40	0.2	44.29447852760736	46	0.2826086956521739	sparse (10-50%)	O54750	Cytochrome P450 2J6 (EC 1.14.14.1) (Arachidonic acid epoxygenase) (CYPIIJ6)	epoxygenase P450 pathway [GO:0019373]; icosanoid metabolic process [GO:0006690]; linoleic acid metabolic process [GO:0043651]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN002921	Chromosome_1A	4218	7	41	33.90232337600759	0.34267948575686	86.73139158576052	35	1	86.1328125	13	1	87.15469613259668	22	1	87.6229768327515	74	0.972972972972973	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004581	Chromosome_1A	1884	5	31	34.50106157112526	0.5583503025783693	51.235370611183356	19	0.631578947368421	63.2183908045977	9	0.7777777777777778	45.07874015748032	10	0.5	61.95307545973367	70	0.7142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004582	Chromosome_1A	2252	3	77	38.765541740674955	0.9154954859827886	0.6424511984185817	77	0	1.0061919504643964	31	0	0.47186932849364793	46	0	0.6345177664974619	29	0	unmethylated (<10%)	G9JJU2	Glutathione peroxidase (PcGPx) (Se-PcGPx) (EC 1.11.1.9)	response to oxidative stress [GO:0006979]	hit with GO BP
GN004583	Chromosome_1A	3134	3	73	35.80089342693044	0.7281598513011153	0.7385120350109409	73	0	0.6514657980456026	35	0	0.7825370675453048	38	0	0.22197558268590456	56	0	unmethylated (<10%)	P91778	Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN004584	Chromosome_1A	240	1	4	47.083333333333336	0.3137254901960784	1.9607843137254901	4	0	1.9607843137254901	4	0	NA	NA	NA	1.7849898580121704	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002926	Chromosome_1A	1334	3	22	38.00599700149925	0.4569062149707311	46.537678207739305	22	0.4090909090909091	37.65867418899859	17	0.35294117647058826	69.59706959706959	5	0.6	1.4521452145214522	59	0	sparse (10-50%)	P0DKY8	U8 snoRNA-decapping enzyme (EC 3.6.1.62) (IDP phosphatase) (IDPase) (EC 3.6.1.64) (Inosine diphosphate phosphatase) (Nucleoside diphosphate-linked moiety X motif 16) (Nudix motif 16) (m7GpppN-mRNA hydrolase)	mRNA catabolic process [GO:0006402]; sno(s)RNA catabolic process [GO:0016077]	hit with GO BP
GN004585	Chromosome_1A	297	1	9	47.81144781144781	0.5306730196545563	97.8021978021978	9	1	97.8021978021978	9	1	NA	NA	NA	80.3391384051329	25	0.84	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004586	Chromosome_1A	9595	9	100	36.68577384054195	0.309986508560086	82.71733472149921	100	1	92.6009986382206	53	1	76.60112359550561	47	1	75.49219280380177	23	0.9565217391304348	methylated (>=50%)	P10180	Homeobox protein cut	antennal development [GO:0007469]; antennal joint development [GO:0048098]; central nervous system development [GO:0007417]; compound eye morphogenesis [GO:0001745]; dendrite arborization [GO:0140059]; dendrite guidance [GO:0070983]; dendrite morphogenesis [GO:0048813]; female gonad development [GO:0008585]; formation of a compartment boundary [GO:0060288]; imaginal disc-derived wing margin morphogenesis [GO:0008587]; Malpighian tubule bud morphogenesis [GO:0061332]; Malpighian tubule morphogenesis [GO:0007443]; negative regulation of transcription by RNA polymerase II [GO:0000122]; oogenesis [GO:0048477]; open tracheal system development [GO:0007424]; peripheral nervous system development [GO:0007422]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory perception of sound [GO:0007605]; spiracle morphogenesis, open tracheal system [GO:0035277]	hit with GO BP
GN002927	Chromosome_1A	4727	5	148	39.58112968055849	0.7994030723946121	0.5487696937511064	134	0	0.4434589800443459	30	0	0.5819366852886406	104	0	0.2886002886002886	22	0	unmethylated (<10%)	P21158	C-signal (17-kDa C-factor protein) (p17) (C-factor) (Cell surface-associated intercellular C-signal)	NA	hit, no GO BP
GN004587	Chromosome_1A	567	1	9	43.20987654320987	0.3402	0.7299270072992701	9	0	0.7299270072992701	9	0	NA	NA	NA	0.4034969737726967	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002422	Chromosome_1A	324	1	19	56.48148148148148	0.7666251556662516	31.61764705882353	19	0	31.61764705882353	19	0	NA	NA	NA	10.077896786757547	68	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004588	Chromosome_1A	339	1	18	52.21238938053097	1.348210340256297	0.6965174129353234	18	0	0.6965174129353234	18	0	NA	NA	NA	0.4934210526315789	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004589	Chromosome_1A	3805	6	97	35.16425755584757	0.8246751215501216	0.6772009029345373	97	0	0.8322663252240717	35	0	0.6126798082045818	62	0	0.5023183925811437	45	0	unmethylated (<10%)	Q6UWM7	Lactase-like protein (Klotho/lactase-phlorizin hydrolase-related protein)	carbohydrate metabolic process [GO:0005975]; lens morphogenesis in camera-type eye [GO:0002089]	hit with GO BP
GN004590	Chromosome_1A	4580	6	113	36.069868995633186	0.7653743315508021	1.2439320388349515	113	0	0.4935225169648365	33	0	1.4886340776503721	80	0	0.40674026728646134	61	0	unmethylated (<10%)	Q6UWM7	Lactase-like protein (Klotho/lactase-phlorizin hydrolase-related protein)	carbohydrate metabolic process [GO:0005975]; lens morphogenesis in camera-type eye [GO:0002089]	hit with GO BP
GN004591	Chromosome_1A	3570	5	100	35.96638655462185	0.8668414918414918	0.4622496147919877	100	0	0.40053404539385845	30	0	0.48727666486193827	70	0	0.5711565920990005	35	0	unmethylated (<10%)	P09848	Lactase/phlorizin hydrolase (Lactase/glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Glycosylceramidase (EC 3.2.1.62) (Phlorizin hydrolase)]	cellobiose catabolic process [GO:2000892]; glycosylceramide catabolic process [GO:0046477]; lactose catabolic process [GO:0005990]; quercetin catabolic process [GO:1901733]	hit with GO BP
GN004592	Chromosome_1A	2367	2	69	39.036755386565275	0.7725086203226768	0.4755865567533291	69	0	0.4484304932735426	19	0	0.48629531388152075	50	0	0.7139214686384497	36	0	unmethylated (<10%)	Q5RF65	Cytosolic beta-glucosidase (EC 3.2.1.21) (Cytosolic galactosylceramidase) (EC 3.2.1.46) (Cytosolic glucosylceramidase) (EC 3.2.1.45) (Cytosolic glycosylceramidase) (Cytosolic GCase)	beta-glucoside catabolic process [GO:1901805]; carbohydrate catabolic process [GO:0016052]; galactosylceramide catabolic process [GO:0006683]; glucosylceramide catabolic process [GO:0006680]	hit with GO BP
GN002911	Chromosome_1A	1980	4	66	36.76767676767677	0.9877551020408163	0.4653868528214078	66	0	0.3424657534246575	22	0	0.507416081186573	44	0	1.3798111837327525	74	0	unmethylated (<10%)	W5PLZ6	Lactase/phlorizin hydrolase (Lactase/glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Glycosylceramidase (EC 3.2.1.62) (Phlorizin hydrolase)]	cellobiose catabolic process [GO:2000892]; glycosylceramide catabolic process [GO:0046477]; lactose catabolic process [GO:0005990]; quercetin catabolic process [GO:1901733]	hit with GO BP
GN002912	Chromosome_1A	613	3	20	35.07340946166395	1.06092073381793	0.19120458891013384	20	0	0.12135922330097088	16	0	0.45045045045045046	4	0	0.4750593824228028	60	0	unmethylated (<10%)	Q9SPP9	Raucaffricine-O-beta-D-glucosidase (Raucaffricine beta-glucosidase) (RsRG) (EC 3.2.1.125) (Vomilenine glucosyltransferase) (RsVGT) (EC 2.4.1.219)	alkaloid biosynthetic process [GO:0009821]; carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN004594	Chromosome_1A	2290	5	56	35.06550218340611	0.7960668437911256	0.5902454178316248	56	0	0.5138086062941555	28	0	0.6618531889290012	28	0	0.21631644004944375	63	0	unmethylated (<10%)	W5PLZ6	Lactase/phlorizin hydrolase (Lactase/glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Glycosylceramidase (EC 3.2.1.62) (Phlorizin hydrolase)]	cellobiose catabolic process [GO:2000892]; glycosylceramide catabolic process [GO:0046477]; lactose catabolic process [GO:0005990]; quercetin catabolic process [GO:1901733]	hit with GO BP
GN004595	Chromosome_1A	1900	4	29	32.89473684210526	0.5733849483849484	46.88323090430202	29	0.3448275862068966	48.26629680998613	17	0.47058823529411764	44.49760765550239	12	0.16666666666666666	0.5630026809651475	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004596	Chromosome_1A	2540	4	44	35.39370078740158	0.5536291041670794	59.31818181818182	37	0.7567567567567568	73.08707124010554	7	0.8571428571428571	55.5394641564084	30	0.7333333333333333	0.6178560395427866	68	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004597	Chromosome_1A	1428	1	41	38.65546218487395	0.7711801896733403	0.7050528789659224	41	0	0.7050528789659224	41	0	NA	NA	NA	0.5546075085324232	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004598	Chromosome_1A	672	1	14	42.410714285714285	0.49396198676887537	0.5576208178438662	14	0	0.5576208178438662	14	0	NA	NA	NA	0.3604531410916581	35	0	unmethylated (<10%)	Q3BCR8	Thiopurine S-methyltransferase (EC 2.1.1.67) (Thiopurine methyltransferase)	xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN004599	Chromosome_1A	33065	21	570	35.167095115681235	0.5596017980726792	84.5901467230111	550	0.9636363636363636	78.21100917431193	32	0.90625	84.89616283867419	518	0.9671814671814671	0.9570395576350489	66	0	methylated (>=50%)	Q9H5Z1	Probable ATP-dependent RNA helicase DHX35 (EC 3.6.4.13) (DEAH box protein 35)	antiviral innate immune response [GO:0140374]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of IP-10 production [GO:0071660]; positive regulation of RIG-I signaling pathway [GO:1900246]	hit with GO BP
GN001732	Chromosome_1A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004601	Chromosome_1A	1197	1	21	42.857142857142854	0.3850289495450786	87.31642189586115	21	0.9523809523809523	87.31642189586115	21	0.9523809523809523	NA	NA	NA	19.334389857369256	10	0.1	methylated (>=50%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN004602	Chromosome_1A	1678	4	24	34.44576877234803	0.48223009866845484	42.7797833935018	24	0.5	2.9177718832891246	5	0	54.474708171206224	19	0.631578947368421	1.3228459063282088	48	0	sparse (10-50%)	Q32P85	Dynein light chain roadblock-type 2 (Dynein light chain 2B, cytoplasmic)	microtubule-based movement [GO:0007018]	hit with GO BP
GN002889	Chromosome_1A	1425	4	41	39.01754385964912	0.7559877333954427	0.3414911781445646	41	0	0.6060606060606061	21	0	0.1072961373390558	20	0	20.957095709570957	52	0.19230769230769232	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002890	Chromosome_1A	6681	3	122	34.575662325999104	0.6120516234256275	92.65052496250267	121	1	96.63157894736842	10	1	92.43706964668698	111	1	89.23230309072781	57	1	methylated (>=50%)	Q9N1Q0	Small nuclear ribonucleoprotein-associated protein B' (snRNP-B') (snRPB') (Sm protein B') (Sm-B') (SmB')	mRNA splicing, via spliceosome [GO:0000398]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN004603	Chromosome_1A	591	1	29	42.30118443316413	1.0971768772805839	0.9237875288683602	29	0	0.9237875288683602	29	0	NA	NA	NA	0.27816411682892905	62	0	unmethylated (<10%)	Q8K0E1	BTB/POZ domain-containing protein KCTD15 (Potassium channel tetramerization domain-containing protein 15)	negative regulation of DNA-templated transcription [GO:0045892]; protein homooligomerization [GO:0051260]	hit with GO BP
GN015610	Chromosome_1A	562	1	9	39.145907473309606	0.43382794407753666	NA	0	NA	NA	NA	NA	NA	NA	NA	7.641196013289036	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004604	Chromosome_1A	315	1	15	46.03174603174603	0.9480337078651685	0.8841732979664014	15	0	0.8841732979664014	15	0	NA	NA	NA	0.7282658170232135	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004605	Chromosome_1A	429	1	0	43.82284382284382	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5265289590927501	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004606	Chromosome_1A	300	1	7	42.666666666666664	0.523038605230386	11.637931034482758	7	0	11.637931034482758	7	0	NA	NA	NA	17.33222407099279	87	0.11494252873563218	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004607	Chromosome_1A	1216	2	32	43.17434210526316	0.5648753012223093	0.7132667617689016	32	0	1.091703056768559	22	0	0	10	0	0.651890482398957	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002893	Chromosome_1A	10421	5	127	34.44966893772191	0.4111708922894914	84.65445796016576	122	0.9098360655737705	66.51542649727767	26	0.7692307692307693	87.78805455400533	96	0.9479166666666666	22.02097235462345	29	0.27586206896551724	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002894	Chromosome_1A	243	1	7	46.502057613168724	0.5332288401253918	87.5432525951557	7	1	87.5432525951557	7	1	NA	NA	NA	70.03508771929825	33	0.8787878787878788	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004609	Chromosome_1A	7451	7	126	34.31754126962824	0.5764775666295786	81.96649029982363	126	0.8888888888888888	48.57621440536013	19	0.5789473684210527	87.02716425488703	107	0.9439252336448598	39.299802761341226	32	0.6875	methylated (>=50%)	P28075	Proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome chain 6) (Proteasome epsilon chain) (Proteasome subunit X) (Proteasome subunit beta-5) (beta-5)	proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; proteolysis [GO:0006508]; regulation of proteasomal protein catabolic process [GO:0061136]; response to oxidative stress [GO:0006979]	hit with GO BP
GN004610	Chromosome_1A	1983	1	95	43.92334846192637	0.9932774438468839	0.28076743097800655	93	0	0.28076743097800655	93	0	NA	NA	NA	16.05723370429253	17	0.17647058823529413	unmethylated (<10%)	Q9R1R2	Tripartite motif-containing protein 3 (EC 2.3.2.27) (RING finger protein 22) (RING finger protein HAC1)	neural precursor cell proliferation [GO:0061351]; positive regulation of toll-like receptor 3 signaling pathway [GO:0034141]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation protein catabolic process at postsynapse [GO:0140252]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN002896	Chromosome_1A	8554	10	100	34.20621931260229	0.3996733088875682	84.22552106762633	100	0.9	75.26705012325391	18	0.8333333333333334	86.22523844460748	82	0.9146341463414634	49.70333181195801	37	0.4864864864864865	methylated (>=50%)	A2AIL4	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6	mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN002897	Chromosome_1A	558	2	4	37.992831541218635	0.21594427244582043	91.55555555555556	4	1	88.31168831168831	3	1	98.59154929577464	1	1	77.60416666666667	9	0.7777777777777778	NA	NA	NA	NA	no Swiss-Prot hit
GN004612	Chromosome_1A	7527	7	63	35.76458084230105	0.2617426548553381	85.52404438964241	63	1	93.16493313521545	17	1	84.00354819633353	46	1	68.3625730994152	20	0.65	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004613	Chromosome_1A	11496	6	184	35.06437021572721	0.5226128468147325	78.83991745283019	184	0.8967391304347826	44.46601941747573	8	0.5	80.19612349651422	176	0.9147727272727273	68.12302006335797	50	0.54	methylated (>=50%)	O75818	Ribonuclease P protein subunit p40 (RNaseP protein p40) (RNase P subunit 1)	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; RNA processing [GO:0006396]; tRNA 5'-leader removal [GO:0001682]	hit with GO BP
GN011516	Chromosome_1A	587	2	22	52.12947189097104	0.6064903959047574	86.04240282685512	22	0.9545454545454546	75.57251908396947	16	0.9375	95.0657894736842	6	1	75.24972253052164	48	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004614	Chromosome_1A	321	1	12	54.82866043613707	0.5580182529335072	67.51592356687898	12	0.9166666666666666	67.51592356687898	12	0.9166666666666666	NA	NA	NA	78.87715397443024	51	0.8235294117647058	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004615	Chromosome_1A	597	1	26	46.231155778894475	0.8185413700363866	79.07771135781384	26	1	79.07771135781384	26	1	NA	NA	NA	79.74226804123711	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004616	Chromosome_1A	7527	9	72	33.67875647668394	0.34590197835527675	83.27378293881198	71	0.9295774647887324	82.60025873221215	31	0.9354838709677419	83.62892223738062	40	0.925	91.96704428424304	42	1	methylated (>=50%)	Q8NCN5	Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial (PDPr)	positive regulation of pyruvate decarboxylation to acetyl-CoA [GO:0140176]	hit with GO BP
GN004617	Chromosome_1A	9008	6	96	32.94849023090586	0.39595042378061485	55.22550544323484	95	0.631578947368421	58.21325648414986	17	0.8823529411764706	54.86401673640167	78	0.5769230769230769	31.613508442776734	36	0.4166666666666667	methylated (>=50%)	Q05AK5	E3 ubiquitin-protein ligase MYLIP-B (EC 2.3.2.27) (Myosin regulatory light chain-interacting protein B) (MIR-B) (RING-type E3 ubiquitin transferase MYLIP-B)	gastrulation [GO:0007369]; negative regulation of Wnt signaling pathway [GO:0030178]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN004618	Chromosome_1A	7230	10	87	32.91839557399723	0.44728041476243674	75.81087623043408	84	0.8333333333333334	80.37135278514589	19	0.8947368421052632	74.79273588630083	65	0.8153846153846154	45.92164418754014	47	0.5319148936170213	methylated (>=50%)	Q60779	Dynein regulatory complex subunit 4 (Growth arrest-specific protein 11) (GAS-11) (Growth arrest-specific protein 8) (GAS-8)	axoneme assembly [GO:0035082]; brain development [GO:0007420]; determination of left/right symmetry [GO:0007368]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; flagellated sperm motility [GO:0030317]; intracellular protein localization [GO:0008104]; microtubule cytoskeleton organization [GO:0000226]; positive regulation of protein localization to cilium [GO:1903566]; positive regulation of smoothened signaling pathway [GO:0045880]; protein localization to cilium [GO:0061512]	hit with GO BP
GN002902	Chromosome_1A	3221	6	79	38.59049984476871	0.6626432920318953	38.54103343465046	79	0.2911392405063291	15.554026152787337	46	0.10869565217391304	56.72291780076211	33	0.5454545454545454	1.191381495564005	59	0	sparse (10-50%)	P12394	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; response to antibiotic [GO:0046677]; steroid biosynthetic process [GO:0006694]; steroid metabolic process [GO:0008202]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN002903	Chromosome_1A	16618	8	445	34.564929594415695	0.8984964086922332	1.7170013797332515	434	0	0.5037783375314862	47	0	1.8168996557016635	387	0	0.48154093097913325	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002904	Chromosome_1A	843	1	40	42.23013048635824	1.0650999715720648	0.8641005498821681	40	0	0.8641005498821681	40	0	NA	NA	NA	2.6877133105802047	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002905	Chromosome_1A	6061	5	100	34.31776934499258	0.560647728040064	82.85135135135135	98	0.8469387755102041	68.22289156626506	12	0.75	84.29334916864607	86	0.8604651162790697	28.79432624113475	29	0.4827586206896552	methylated (>=50%)	Q16698	2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial (EC 1.3.1.124) (2,4-dienoyl-CoA reductase [NADPH]) (4-enoyl-CoA reductase [NADPH]) (Short chain dehydrogenase/reductase family 18C member 1)	fatty acid beta-oxidation [GO:0006635]; positive regulation of cold-induced thermogenesis [GO:0120162]	hit with GO BP
GN004620	Chromosome_1A	5321	7	128	35.82033452358579	0.750718656861189	1.4692207550678817	127	0	1.1387163561076605	24	0	1.5416005440943097	103	0	0.6124234470691163	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004621	Chromosome_1A	8809	16	250	37.93847201725508	0.7887045404813416	0.5584116291437689	241	0	0.5706134094151213	72	0	0.5543760320830384	169	0	0.2518891687657431	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004622	Chromosome_1A	7580	8	235	38.3509234828496	0.846809809359642	0.6875477463712758	217	0	0.37299515106303616	67	0	0.7957900141188551	150	0	0.6074411541381929	48	0	unmethylated (<10%)	P08289	Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme) (Phosphoamidase) (Phosphocreatine phosphatase) (EC 3.9.1.1)	bone mineralization [GO:0030282]; calcium ion homeostasis [GO:0055074]; cementum mineralization [GO:0071529]; developmental process involved in reproduction [GO:0003006]; endochondral ossification [GO:0001958]; futile creatine cycle [GO:0140651]; inhibition of non-skeletal tissue mineralization [GO:0140928]; phosphate ion homeostasis [GO:0055062]; positive regulation of cold-induced thermogenesis [GO:0120162]; pyridoxal 5'-phosphate metabolic process [GO:0042822]; response to antibiotic [GO:0046677]; response to glucocorticoid [GO:0051384]; response to insulin [GO:0032868]; response to lipopolysaccharide [GO:0032496]; response to macrophage colony-stimulating factor [GO:0036005]; response to sodium phosphate [GO:1904383]; response to vitamin B6 [GO:0034516]; response to vitamin D [GO:0033280]	hit with GO BP
GN004623	Chromosome_1A	600	1	25	40	1.0463169642857142	1.2461059190031152	25	0	1.2461059190031152	25	0	NA	NA	NA	0.6220379146919431	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004624	Chromosome_1A	198	1	7	46.464646464646464	0.6628407460545194	1.3513513513513513	7	0	1.3513513513513513	7	0	NA	NA	NA	0.8453680873547024	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004625	Chromosome_1A	1173	1	41	41.1764705882353	0.8261698618841476	0.9266409266409267	41	0	0.9266409266409267	41	0	NA	NA	NA	0.41866028708133973	52	0	unmethylated (<10%)	Q6DWJ6	Probable G protein-coupled receptor 139 (G protein-coupled receptor PGR3) (G(q)-coupled orphan receptor GPRg1)	G protein-coupled receptor signaling pathway [GO:0007186]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]	hit with GO BP
GN002528	Chromosome_1A	1124	2	36	44.03914590747331	0.6615439950299186	0	10	0	0	7	0	0	3	0	9.090909090909092	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004626	Chromosome_1A	357	1	5	37.81512605042017	0.3996865203761755	1.1627906976744187	5	0	1.1627906976744187	5	0	NA	NA	NA	0.6170458927882762	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002886	Chromosome_1A	1180	2	37	36.355932203389834	0.9497911590671771	0.338409475465313	37	0	0.4241781548250265	23	0	0.24096385542168675	14	0	0.8336989907854322	31	0	unmethylated (<10%)	Q60803	TNF receptor-associated factor 3 (EC 2.3.2.27) (CD40 receptor-associated factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (RING-type E3 ubiquitin transferase TRAF3)	antiviral innate immune response [GO:0140374]; cell surface receptor signaling pathway [GO:0007166]; mRNA transcription [GO:0009299]; positive regulation of type I interferon production [GO:0032481]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of cytokine production [GO:0001817]; regulation of defense response to virus [GO:0050688]; regulation of interferon-beta production [GO:0032648]; regulation of proteolysis [GO:0030162]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor signaling pathway [GO:0002224]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN004627	Chromosome_1A	984	1	40	37.80487804878049	1.1379998265244167	0.5661712668082095	38	0	0.5661712668082095	38	0	NA	NA	NA	0.6809338521400778	40	0	unmethylated (<10%)	O95395	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M) (hC2GnT-M) (Core 2/core 4 beta-1,6-N-acetylglucosaminyltransferase) (C2/4GnT)	carbohydrate metabolic process [GO:0005975]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN004628	Chromosome_1A	2028	3	10	43.83629191321499	0.10264300681249937	1.4326647564469914	7	0	1.3274336283185841	5	0	1.6260162601626016	2	0	0.45777065690089264	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002877	Chromosome_1A	13358	12	342	35.51429854768678	0.8123275657890525	0.6977992485238862	323	0	0.5345551737304315	56	0	0.7301479211591572	267	0	0.5249343832020997	58	0	unmethylated (<10%)	Q86YT5	Na(+)/citrate cotransporter (NaCT) (Sodium-coupled citrate transporter) (Sodium-dependent citrate transporter) (Solute carrier family 13 member 5)	alpha-ketoglutarate transport [GO:0015742]; cellular response to lithium ion [GO:0071285]; citrate transport [GO:0015746]; fumarate transport [GO:0015741]; oxaloacetate transport [GO:0015729]; succinate transport [GO:0015744]; transmembrane transport [GO:0055085]	hit with GO BP
GN002876	Chromosome_1A	7704	5	179	36.91588785046729	0.6831140524688912	0.8525576730190572	177	0	0.7839127471029311	30	0	0.8748615725359912	147	0	0.5205868433506863	55	0	unmethylated (<10%)	Q5BKW7	Glycerophosphocholine cholinephosphodiesterase ENPP6 (GPC-Cpde) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Ectonucleotide pyrophosphatase/phosphodiesterase family member 6) (E-NPP 6) (NPP-6)	choline metabolic process [GO:0019695]; lipid metabolic process [GO:0006629]	hit with GO BP
GN002875	Chromosome_1A	599	2	10	44.90818030050084	0.33167220376522705	0.43103448275862066	10	0	0.43103448275862066	10	0	NA	NA	NA	0.1347708894878706	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002874	Chromosome_1A	612	1	21	41.50326797385621	0.7968255936511873	0	21	0	0	21	0	NA	NA	NA	1.070615034168565	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004631	Chromosome_1A	1452	4	32	36.570247933884296	0.6603939850478979	0.6185567010309279	24	0	0.608596424496006	19	0	0.6394884092725819	5	0	0.5139664804469274	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004632	Chromosome_1A	1587	3	28	32.577189666036546	0.6691967109424415	0.7234279354479688	28	0	0.5988023952095808	6	0	0.7518796992481203	22	0	0.5066250974279034	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004633	Chromosome_1A	2770	7	29	35.9927797833935	0.32424337829874145	13.050397877984086	29	0	13.20085166784954	24	0	12.605042016806722	5	0	2.3643603782976603	83	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004634	Chromosome_1A	7963	7	234	35.30076604294864	0.9437634409691376	0.907286645874681	234	0	0.5546995377503852	46	0	1.0126116174169197	188	0	1.2380952380952381	23	0	unmethylated (<10%)	Q6DDP3	Glycerophosphocholine cholinephosphodiesterase ENPP6 (GPC-Cpde) (EC 3.1.4.-) (EC 3.1.4.38) (Choline-specific glycerophosphodiester phosphodiesterase) (Ectonucleotide pyrophosphatase/phosphodiesterase family member 6) (E-NPP 6) (NPP-6)	choline metabolic process [GO:0019695]; lipid metabolic process [GO:0006629]	hit with GO BP
GN004635	Chromosome_1A	40246	14	1067	36.30174427272276	0.8052568796306744	1.749182447334398	1065	0	0.5771567436208992	80	0	1.8274379360700956	985	0	1.0030090270812437	25	0	unmethylated (<10%)	Q80WR1	Tetraspanin-18 (Tspan-18)	calcium-ion regulated exocytosis [GO:0017156]; hemostasis [GO:0007599]; inflammatory response [GO:0006954]; protein localization to cell periphery [GO:1990778]; regulation of sprouting angiogenesis [GO:1903670]; regulation of store-operated calcium entry [GO:2001256]	hit with GO BP
GN002869	Chromosome_1A	288	1	3	52.77777777777778	0.15023474178403756	0	3	0	0	3	0	NA	NA	NA	0.49818840579710144	73	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004637	Chromosome_1A	13902	7	383	36.620630125161846	0.8219292653145025	1.1294094233543956	381	0	0.4579278763594734	38	0	1.193330427201395	343	0	0.5610098176718092	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004638	Chromosome_1A	1835	2	25	39.073569482288825	0.359212277816929	0.24937655860349128	24	0	0	16	0	0.7518796992481203	8	0	0.43010752688172044	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004639	Chromosome_1A	13372	13	341	34.62458869279091	0.8508423145826605	0.8309666561481014	336	0	0.42847725774555045	58	0	0.9073842302878599	278	0	0.4509582863585118	40	0	unmethylated (<10%)	P48065	Sodium- and chloride-dependent betaine transporter (BGT-1) (Na(+)/Cl(-) betaine/GABA transporter) (Solute carrier family 6 member 12)	amino acid transport [GO:0006865]; gamma-aminobutyric acid reuptake [GO:0051936]; gamma-aminobutyric acid transport [GO:0015812]; glycine betaine transport [GO:0031460]; monocarboxylic acid transport [GO:0015718]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN004640	Chromosome_1A	21586	13	516	36.10210321504679	0.7338978186220054	0.7367255792648013	513	0	0.5734767025089605	49	0	0.756184047507156	464	0	0.4904632152588556	77	0	unmethylated (<10%)	Q99884	Sodium-dependent proline transporter (Solute carrier family 6 member 7)	glycine import across plasma membrane [GO:1903804]; neurotransmitter transport [GO:0006836]; proline transport [GO:0015824]; protein catabolic process [GO:0030163]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN002865	Chromosome_1A	1323	2	34	33.48450491307634	0.9197644460802356	0.7568590350047304	33	0	1.366120218579235	9	0	0.6292906178489702	24	0	0.7914338919925512	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002864	Chromosome_1A	672	1	23	42.11309523809524	0.7724137931034483	1.5759312320916905	23	0	1.5759312320916905	23	0	NA	NA	NA	1.971915147893636	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004642	Chromosome_1A	830	2	8	39.1566265060241	0.2573045028287995	95.77922077922078	8	1	95.3125	6	1	96.55172413793103	2	1	72.01017811704834	9	0.4444444444444444	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004643	Chromosome_1A	1890	1	18	44.44444444444444	0.19597790208017696	92.07258834765999	18	1	92.07258834765999	18	1	NA	NA	NA	88.27004219409282	15	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004644	Chromosome_1A	14786	21	222	35.07371838225348	0.4909490902874404	88.98379970544919	218	0.963302752293578	91.4001048767698	63	0.9682539682539683	88.04013925865247	155	0.9612903225806452	21.303560651780327	23	0	methylated (>=50%)	A0A0G2K344	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (PI3-kinase subunit alpha) (PI3K-alpha) (PI3Kalpha) (PtdIns-3-kinase subunit alpha) (EC 2.7.1.137) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit alpha) (PtdIns-3-kinase subunit p110-alpha) (p110alpha) (Phosphoinositide-3-kinase catalytic alpha polypeptide) (Serine/threonine protein kinase PIK3CA) (EC 2.7.11.1)	actin cytoskeleton organization [GO:0030036]; adipose tissue development [GO:0060612]; autosome genomic imprinting [GO:0141068]; cardiac muscle cell contraction [GO:0086003]; cell migration [GO:0016477]; cellular response to glucose stimulus [GO:0071333]; cellular response to hydrostatic pressure [GO:0071464]; cellular response to insulin stimulus [GO:0032869]; energy homeostasis [GO:0097009]; glucose metabolic process [GO:0006006]; insulin receptor signaling pathway [GO:0008286]; insulin-like growth factor receptor signaling pathway [GO:0048009]; liver development [GO:0001889]; negative regulation of actin filament depolymerization [GO:0030835]; negative regulation of anoikis [GO:2000811]; negative regulation of fibroblast apoptotic process [GO:2000270]; negative regulation of gene expression [GO:0010629]; negative regulation of neuron apoptotic process [GO:0043524]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; phosphatidylinositol-3-phosphate biosynthetic process [GO:0036092]; phosphatidylinositol-mediated signaling [GO:0048015]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of protein kinase activity [GO:0045860]; positive regulation of protein localization to membrane [GO:1905477]; positive regulation of smooth muscle cell proliferation [GO:0048661]; regulation of actin filament organization [GO:0110053]; regulation of cellular respiration [GO:0043457]; regulation of gene expression [GO:0010468]; regulation of multicellular organism growth [GO:0040014]; regulation of protein phosphorylation [GO:0001932]; relaxation of cardiac muscle [GO:0055119]; response to activity [GO:0014823]; response to butyrate [GO:1903544]; response to dexamethasone [GO:0071548]; response to L-leucine [GO:0043201]; response to muscle inactivity [GO:0014870]; response to muscle stretch [GO:0035994]; TORC2 signaling [GO:0038203]; vascular endothelial growth factor signaling pathway [GO:0038084]	hit with GO BP
GN004645	Chromosome_1A	15499	6	209	30.75037099167688	0.642883694548324	72.4997724997725	158	0.879746835443038	69.87509184423219	19	0.6842105263157895	72.8707935189032	139	0.9064748201438849	19.391853126792885	35	0.2	methylated (>=50%)	Q7ZUC2	45 kDa calcium-binding protein (Cab45) (Stromal cell-derived factor 4) (SDF-4)	calcium-ion regulated exocytosis [GO:0017156]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN004646	Chromosome_1A	7119	11	80	35.215620171372386	0.36790555075367926	83.43276732446076	79	0.7974683544303798	81.00208768267224	37	0.8378378378378378	85.33988533988534	42	0.7619047619047619	14.702233250620347	28	0.2857142857142857	methylated (>=50%)	Q9UK58	Cyclin-L1 (Cyclin-L)	regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of centrosome cycle [GO:0046605]; regulation of mRNA splicing, via spliceosome [GO:0048024]; regulation of RNA splicing [GO:0043484]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004647	Chromosome_1A	2533	7	79	37.662850375049345	0.8808767079870404	0.4649240624031408	67	0	0.4971002485501243	53	0	0.3693065244152647	14	0	0.539714867617108	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004648	Chromosome_1A	3793	6	105	39.17743211178487	0.7273449484987946	0.6462174737204894	91	0	0.7059298104074223	35	0	0.601684717208183	56	0	11.17056856187291	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004649	Chromosome_1A	13372	14	219	36.50912354172899	0.49510854128626497	89.44115049829696	132	0.9545454545454546	95.13637857377589	51	1	85.8927108927109	81	0.9259259259259259	95.85139318885449	22	1	methylated (>=50%)	Q3SYW6	Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8) (eIF3 p110)	formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	hit with GO BP
GN004650	Chromosome_1A	6691	7	64	32.35689732476461	0.37429419518147267	88.04544280919184	62	0.967741935483871	95.80686149936467	13	1	86.06610499027867	49	0.9591836734693877	62.207721587819464	39	0.7435897435897436	methylated (>=50%)	B4MRZ8	Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8)	formation of cytoplasmic translation initiation complex [GO:0001732]	hit with GO BP
GN004651	Chromosome_1A	9857	12	106	33.92512934970072	0.3737581394117624	86.60604571147702	105	0.9333333333333333	72.69815852682146	22	0.8181818181818182	89.12759471621426	83	0.963855421686747	42.20320059545962	56	0.5	methylated (>=50%)	Q5ZHX9	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 (EC 2.5.1.108) (Diphthamide biosynthesis protein 1) (Diphtheria toxin resistance protein 1) (S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase 1)	protein histidyl modification to diphthamide [GO:0017183]	hit with GO BP
GN004652	Chromosome_1A	16028	15	243	36.25530321936611	0.4647089761236143	86.59014000398116	243	0.9259259259259259	89.84626385412942	47	0.9148936170212766	85.84813426755744	196	0.9285714285714286	69.67260195290064	17	0.8823529411764706	methylated (>=50%)	Q5ZII9	Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1)	negative regulation of protein-containing complex assembly [GO:0031333]; spliceosomal complex disassembly [GO:0000390]	hit with GO BP
GN004653	Chromosome_1A	30645	17	352	33.79344101811062	0.4038977277982039	71.29569892473118	300	0.7933333333333333	83.30550918196995	63	0.9047619047619048	68.99070810637616	237	0.7637130801687764	0.6398537477148081	40	0	methylated (>=50%)	F1R520	Calsyntenin-1	axon arborization [GO:0140060]; axonal transport [GO:0098930]; endocytic recycling [GO:0032456]; establishment or maintenance of microtubule cytoskeleton polarity [GO:0030951]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]; regulation of collateral sprouting [GO:0048670]	hit with GO BP
GN004654	Chromosome_1A	1893	5	58	37.77073428420496	0.8595518812532293	0.43816942551119764	51	0	0.2849002849002849	31	0	0.5994005994005994	20	0	0.5823912298732442	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004655	Chromosome_1A	2549	7	91	37.426441741859556	1.019582073282228	0.4672897196261682	91	0	0.4893964110929853	62	0	0.43370508054522927	29	0	2.682186234817814	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004656	Chromosome_1A	4506	5	48	35.042166000887704	0.34854017539166615	83.30727130570759	46	0.9565217391304348	89.35779816513761	11	1	81.66915052160954	35	0.9428571428571428	78.90048358360906	43	1	methylated (>=50%)	Q7SY23	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial (P5C dehydrogenase) (EC 1.2.1.88) (Aldehyde dehydrogenase family 4 member A1) (L-glutamate gamma-semialdehyde dehydrogenase)	NA	hit, no GO BP
GN002855	Chromosome_1A	7304	5	90	37.92442497261774	0.3557142857142857	84.7926267281106	90	0.9666666666666667	88.2936507936508	10	1	84.27395649617871	80	0.9625	66.72064777327935	46	0.9130434782608695	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002856	Chromosome_1A	9622	6	116	35.28372479733943	0.38743762270658444	77.84446430851743	110	0.8545454545454545	50	13	0.5384615384615384	81.81818181818181	97	0.8969072164948454	5.022156573116692	35	0.05714285714285714	methylated (>=50%)	O75934	Pre-mRNA-splicing factor SPF27 (Breast carcinoma-amplified sequence 2) (DNA amplified in mammary carcinoma 1 protein) (Spliceosome-associated protein SPF 27)	mRNA splicing, via spliceosome [GO:0000398]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]	hit with GO BP
GN004658	Chromosome_1A	21001	12	354	34.779296223989334	0.560347130351309	80.81657619084028	353	0.9036827195467422	80.86991542488924	45	0.8666666666666667	80.810982048574445	308	0.9090909090909091	5.833333333333333	40	0.025	methylated (>=50%)	Q6GVH4	Gametogenetin-binding protein 2 (Protein ZNF403)	NA	hit, no GO BP
GN004659	Chromosome_1A	1151	3	22	34.31798436142485	0.6491821771009588	2.387267904509284	12	0	2.898550724637681	5	0	2.092050209205021	7	0	2.4175199089874857	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004660	Chromosome_1A	1675	2	24	32	0.5610215616495708	1.0657193605683837	16	0	0.746268656716418	11	0	1.3559322033898304	5	0	0.668724279835391	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002843	Chromosome_1A	2829	4	33	35.70166136443973	0.36607142857142855	13.870474247832739	24	0	8.211678832116789	17	0	16.065109695682946	7	0	1.077496891835889	84	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004661	Chromosome_1A	6771	2	237	38.63535666814355	0.9379716959075266	0.5105046141763204	237	0	0.4764065335753176	97	0	0.5365178262374524	140	0	0.38910505836575876	58	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN004662	Chromosome_1A	9587	10	218	36.4347553979347	0.6858936617800051	0.8481293595434369	213	0	0.7419898819561551	113	0	0.9422674244690398	100	0	0.30349013657056145	50	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN004663	Chromosome_1A	18819	15	250	35.93177108241671	0.41550677740370856	82.49928510151558	248	0.8951612903225806	88.76638855780692	57	0.9122807017543859	80.52106847253575	191	0.8900523560209425	53.87931034482759	25	0.44	methylated (>=50%)	Q7ZXF1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR4 (EC 3.1.3.95) (Myotubularin-related protein 4) (Phosphatidylinositol-3,5-bisphosphate 3-phosphatase) (Phosphatidylinositol-3-phosphate phosphatase)	glycerophospholipid biosynthetic process [GO:0046474]; midbody abscission [GO:0061952]; negative regulation of endocytic recycling [GO:2001136]; phagosome maturation [GO:0090382]; phosphatidylinositol dephosphorylation [GO:0046856]; regulation of autophagy [GO:0010506]	hit with GO BP
GN004664	Chromosome_1A	32752	47	334	35.8390327308256	0.3199984929089347	94.03814769481845	334	0.9970059880239521	95.19634006862371	152	1	93.26177698270722	182	0.9945054945054945	85.70663811563169	35	1	methylated (>=50%)	Q8TEP8	Centrosomal protein of 192 kDa (Cep192) (Cep192/SPD-2)	centriole replication [GO:0007099]; centrosome cycle [GO:0007098]; centrosome-templated microtubule nucleation [GO:0090222]; mitotic spindle assembly [GO:0090307]; protein localization to centrosome [GO:0071539]	hit with GO BP
GN004665	Chromosome_1A	1607	2	22	37.77224642190417	0.385935419077353	90.73170731707317	22	1	93.26315789473684	17	1	82.14285714285714	5	1	0.8681497558328811	46	0	methylated (>=50%)	Q5M8L8	Voltage-gated hydrogen channel 1 (Hydrogen voltage-gated channel 1) (HV1)	cellular response to pH [GO:0071467]; cellular response to zinc ion [GO:0071294]; proton transmembrane transport [GO:1902600]	hit with GO BP
GN002828	Chromosome_1A	9213	6	232	35.363073917290784	0.805738668041848	0.7518796992481203	231	0	0.8205494113449875	112	0	0.6991089787525703	119	0	0.5438723712835388	44	0	unmethylated (<10%)	A6NMZ7	Collagen alpha-6(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN004666	Chromosome_1A	5517	4	157	34.23962298350553	0.9725701158098267	2.171477811288238	157	0	1.3636363636363635	31	0	2.275157997083131	126	0	0.7751937984496124	17	0	unmethylated (<10%)	Q28FI8	Neuferricin (Cytochrome b5 domain-containing protein 2)	NA	hit, no GO BP
GN004667	Chromosome_1A	4220	4	102	43.388625592417064	0.515671160799216	0.6868131868131868	98	0	0.8264462809917356	83	0	0.23337222870478413	15	0	0.531766022949902	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004668	Chromosome_1A	27258	15	359	34.84114755301196	0.43698668492203735	77.86596119929453	355	0.8929577464788733	82.63707571801567	25	0.96	77.50074947536724	330	0.8878787878787879	40.414878397711014	24	0.3333333333333333	methylated (>=50%)	Q90687	Tyrosine-protein phosphatase non-receptor type 11 (EC 3.1.3.48) (SH-PTP2) (cSH-PTP2)	cellular response to epidermal growth factor stimulus [GO:0071364]; ERBB signaling pathway [GO:0038127]; negative regulation of chondrocyte differentiation [GO:0032331]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of ossification [GO:0045778]	hit with GO BP
GN004669	Chromosome_1A	6469	6	183	36.126140052558355	0.8670692584888524	1.4950980392156863	181	0	1.8032144257154057	57	0	1.3549652344446426	124	0	4.70383275261324	54	0.07407407407407407	unmethylated (<10%)	Q6DDL7	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN004670	Chromosome_1A	15847	9	195	34.78260869565217	0.41075277392856074	80.05775577557756	190	0.8368421052631579	76.92967409948542	23	0.8260869565217391	80.39072484937009	167	0.8383233532934131	73.5371838429596	50	0.58	methylated (>=50%)	Q0P5J9	Regulation of nuclear pre-mRNA domain-containing protein 1A (Cyclin-dependent kinase inhibitor 2B-related protein) (p15INK4B-related protein)	mRNA 3'-end processing [GO:0031124]; RNA polymerase II promoter clearance [GO:0001111]	hit with GO BP
GN004671	Chromosome_1A	192	1	5	45.833333333333336	0.5175202156334232	46.30225080385852	5	0.4	46.30225080385852	5	0.4	NA	NA	NA	64.08450704225352	9	0.5555555555555556	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004672	Chromosome_1A	14577	20	171	33.90272346847774	0.40922429078014183	83.68780675584641	171	0.783625730994152	76.05905006418486	74	0.6081081081081081	86.9553264604811	97	0.9175257731958762	82.1837201699902	46	0.8260869565217391	methylated (>=50%)	Q8BG40	Katanin p80 WD40 repeat-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin)	microtubule depolymerization [GO:0007019]; microtubule severing [GO:0051013]; mitotic chromosome movement towards spindle pole [GO:0007079]; negative regulation of microtubule depolymerization [GO:0007026]; positive regulation of apoptotic process [GO:0043065]; positive regulation of microtubule depolymerization [GO:0031117]; positive regulation of neuron projection development [GO:0010976]	hit with GO BP
GN004673	Chromosome_1A	1029	1	50	45.18950437317784	0.9518963922294172	0.3516998827667057	43	0	0.3516998827667057	43	0	NA	NA	NA	0.5741626794258373	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004674	Chromosome_1A	3583	2	122	37.594194808819424	1.0081784215139076	1.3676148796498906	59	0	0	9	0	1.4898688915375446	50	0	0.8449304174950298	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004675	Chromosome_1A	485	2	7	37.93814432989691	0.40187026515151514	88.51963746223565	7	1	92.56505576208178	6	1	70.96774193548387	1	1	87.31617647058823	17	0.9411764705882353	methylated (>=50%)	Q9HD42	Charged multivesicular body protein 1a (Chromatin-modifying protein 1a) (CHMP1a) (Vacuolar protein sorting-associated protein 46-1) (Vps46-1) (hVps46-1)	autophagosome maturation [GO:0097352]; autophagy [GO:0006914]; cell division [GO:0051301]; ESCRT III complex disassembly [GO:1904903]; late endosome to lysosome transport [GO:1902774]; late endosome to vacuole transport [GO:0045324]; membrane fission [GO:0090148]; midbody abscission [GO:0061952]; mitotic chromosome condensation [GO:0007076]; mitotic metaphase chromosome alignment [GO:0007080]; multivesicular body assembly [GO:0036258]; multivesicular body sorting pathway [GO:0071985]; multivesicular body-lysosome fusion [GO:0061763]; negative regulation of gene expression [GO:0010629]; nuclear membrane reassembly [GO:0031468]; nucleus organization [GO:0006997]; plasma membrane repair [GO:0001778]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic spindle assembly [GO:1901673]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; vesicle fusion with vacuole [GO:0051469]; vesicle-mediated transport [GO:0016192]; viral budding from plasma membrane [GO:0046761]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN004676	Chromosome_1A	963	2	15	35.41017653167186	0.5281921895568231	15.617128463476071	15	0.13333333333333333	31.547619047619047	7	0.2857142857142857	3.930131004366812	8	0	44.376606683804624	60	0.48333333333333334	sparse (10-50%)	P82916	Small ribosomal subunit protein uS17m (28S ribosomal protein S17, mitochondrial) (MRP-S17) (S17mt)	translation [GO:0006412]	hit with GO BP
GN004677	Chromosome_1A	7834	5	87	37.222364054123055	0.3211987256824008	66.22757210992505	80	0.7875	73.70848708487085	21	0.7142857142857143	63.784272371196145	59	0.8135593220338984	0.6655574043261231	73	0	methylated (>=50%)	Q66IJ4	GPI alpha-1,4-mannosyltransferase I, catalytic subunit (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN004678	Chromosome_1A	18729	8	290	34.443910513108015	0.5220748616716592	78.80867258678353	288	0.9027777777777778	87.46355685131195	15	1	78.45220941402498	273	0.8974358974358975	47.65217391304348	9	0.5555555555555556	methylated (>=50%)	Q9UKV5	E3 ubiquitin-protein ligase AMFR (EC 2.3.2.36) (Autocrine motility factor receptor) (AMF receptor) (RING finger protein 45) (gp78)	endoplasmic reticulum mannose trimming [GO:1904380]; endoplasmic reticulum unfolded protein response [GO:0030968]; ERAD pathway [GO:0036503]; learning or memory [GO:0007611]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; non-canonical NF-kappaB signal transduction [GO:0038061]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]; protein unfolding [GO:0043335]; regulation of SREBP signaling pathway [GO:2000638]; signal transduction [GO:0007165]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN004679	Chromosome_1A	14543	2	145	37.64697792752527	0.2816429339208555	82.36641221374046	144	0.9513888888888888	81.41425088052019	75	0.9733333333333334	83.59566281916754	69	0.927536231884058	60.143198090692124	21	0.7619047619047619	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004680	Chromosome_1A	21488	7	346	35.629188384214444	0.5088476278523768	76.30152734439153	246	0.8292682926829268	63.375	20	0.6	77.2104060467569	226	0.8495575221238938	58.4641638225256	55	0.5454545454545454	methylated (>=50%)	F1QB30	E3 ubiquitin-protein ligase AMFR (EC 2.3.2.36) (Autocrine motility factor receptor) (AMF receptor)	endoplasmic reticulum unfolded protein response [GO:0030968]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]; response to endoplasmic reticulum stress [GO:0034976]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN004681	Chromosome_1A	1302	1	19	40.476190476190474	0.3602131749082649	90.35087719298245	19	1	90.35087719298245	19	1	NA	NA	NA	85.92833876221498	25	0.96	methylated (>=50%)	Q9J4Z4	Putative ankyrin repeat protein FPV246	NA	hit, no GO BP
GN004682	Chromosome_1A	2142	4	28	36.60130718954248	0.39400867165944026	88.71740287386908	28	1	91.78947368421052	15	1	85.57588805166846	13	1	67.4015748031496	47	0.8723404255319149	methylated (>=50%)	Q5M8N4	Epimerase family protein SDR39U1 (EC 1.1.1.-) (Short-chain dehydrogenase/reductase family 39U member 1)	NA	hit, no GO BP
GN002814	Chromosome_1A	533	2	14	36.58536585365854	0.7924808836023789	60.34318398474738	14	0.7142857142857143	59.07172995780591	13	0.6923076923076923	72.27722772277228	1	1	0.8729388942774006	64	0	methylated (>=50%)	A6QLQ8	Uridylate-specific endoribonuclease (EC 3.1.-.-) (EC 4.6.1.-) (Protein endoU)	immune response [GO:0006955]	hit with GO BP
GN002813	Chromosome_1A	11122	18	374	37.76299226757777	0.9500520291363164	2.015263534462199	374	0	0.9700366458288424	102	0	2.4149015082831946	272	0	30.337535583570556	44	0.22727272727272727	unmethylated (<10%)	Q8R516	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Dystrophin-like protein) (Dyslike) (Mind bomb homolog 2) (Mind bomb-2) (RING-type E3 ubiquitin transferase MIB2) (Skeletrophin)	protein ubiquitination [GO:0016567]; regulation of postsynaptic neurotransmitter receptor internalization [GO:0099149]; regulation protein catabolic process at postsynapse [GO:0140252]	hit with GO BP
GN004683	Chromosome_1A	19112	21	245	35.91460862285475	0.39931493479165386	90.44528977399865	211	0.966824644549763	91.99745951095586	53	1	89.96880483525054	158	0.9556962025316456	88.2202304737516	13	1	methylated (>=50%)	P22892	AP-1 complex subunit gamma-1 (Adaptor protein complex AP-1 subunit gamma-1) (Adaptor-related protein complex 1 subunit gamma-1) (Clathrin adaptor protein 1 core) (Clathrin assembly protein complex 1 gamma-1 large chain) (Gamma-adaptin) (Gamma1-adaptin) (Golgi adaptor HA1/AP1 adaptin subunit gamma-1)	basolateral protein secretion [GO:0110010]; endosome to melanosome transport [GO:0035646]; Golgi to lysosome transport [GO:0090160]; Golgi to vacuole transport [GO:0006896]; intracellular protein transport [GO:0006886]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; positive regulation of natural killer cell degranulation [GO:0043323]; positive regulation of natural killer cell mediated cytotoxicity [GO:0045954]; synaptic vesicle budding from endosome [GO:0016182]; synaptic vesicle endocytosis [GO:0048488]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN002807	Chromosome_1A	580	1	34	51.724137931034484	0.8892496392496393	0.8419083255378859	34	0	0.8419083255378859	34	0	NA	NA	NA	0.7343550446998723	46	0	unmethylated (<10%)	G5CTG2	Aquaporin-5 (AQP-5)	NA	hit, no GO BP
GN002808	Chromosome_1A	1198	4	27	39.14858096828047	0.623116933153535	0.5287508261731659	27	0	0.3525264394829612	15	0	0.7552870090634441	12	0	0.6524317912218268	29	0	unmethylated (<10%)	P18293	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN002809	Chromosome_1A	213	1	1	57.74647887323944	0.06800766283524905	NA	0	NA	NA	NA	NA	NA	NA	NA	0.45694200351493847	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002810	Chromosome_1A	204	1	5	50	0.599647266313933	0.8032128514056225	5	0	0.8032128514056225	5	0	NA	NA	NA	0.5664652567975831	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004684	Chromosome_1A	7005	6	224	36.11705924339757	0.9812709770497708	1.5267990604313475	209	0	1.0659560293137909	29	0	1.6147488874761602	180	0	0.6489292667099286	48	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN004685	Chromosome_1A	16169	10	385	35.914404106623785	0.7389546719847107	1.6815554387808722	378	0	0.7340753019180677	81	0	1.9517795637198623	297	0	0.43224002034070685	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002801	Chromosome_1A	35854	5	528	33.488592625648465	0.5285614952370891	22.957649788130578	508	0.11220472440944881	18.433395872420263	20	0.05	23.19812520256289	488	0.11475409836065574	1.2112403100775193	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002791	Chromosome_1A	15071	8	227	34.7820317165417	0.5011920667569104	35.356476297125795	227	0.3524229074889868	20.02791346824843	23	0.17391304347826086	37.19277712757064	204	0.37254901960784315	1.146131805157593	31	0	sparse (10-50%)	Q5M834	Dysbindin (Biogenesis of lysosome-related organelles complex 1 subunit 8) (BLOC-1 subunit 8) (Dysbindin-1) (Dystrobrevin-binding protein 1)	actin cytoskeleton organization [GO:0030036]; anterograde axonal transport [GO:0008089]; anterograde synaptic vesicle transport [GO:0048490]; axo-dendritic protein transport [GO:0099640]; blood coagulation [GO:0007596]; cilium assembly [GO:0060271]; dendrite morphogenesis [GO:0048813]; gene expression [GO:0010467]; intracellular protein localization [GO:0008104]; kidney development [GO:0001822]; memory [GO:0007613]; negative regulation of dendritic spine morphogenesis [GO:0061002]; negative regulation of protein serine/threonine kinase activity [GO:0071901]; neuron projection development [GO:0031175]; neuron projection morphogenesis [GO:0048812]; platelet dense granule organization [GO:0060155]; positive regulation of gene expression [GO:0010628]; positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization [GO:0061646]; positive regulation of neurotransmitter secretion [GO:0001956]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of receptor internalization [GO:0002092]; protein localization to ciliary membrane [GO:1903441]; protein transmembrane transport [GO:0071806]; regulation of dopamine receptor signaling pathway [GO:0060159]; regulation of dopamine secretion [GO:0014059]; regulation of JUN kinase activity [GO:0043506]; regulation of signal transduction [GO:0009966]; regulation of synaptic vesicle exocytosis [GO:2000300]; retina development in camera-type eye [GO:0060041]	hit with GO BP
GN002792	Chromosome_1A	642	1	11	38.006230529595015	0.5028839991454818	3.7854889589905363	11	0	3.7854889589905363	11	0	NA	NA	NA	3.5379254891450014	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002793	Chromosome_1A	6428	7	62	34.847542003733665	0.3205819988352301	77.44550027948574	62	0.9516129032258065	91.50227617602428	11	1	74.27201096265844	51	0.9411764705882353	24.436936936936938	43	0.2558139534883721	methylated (>=50%)	Q1LXS2	Proteasome assembly chaperone 2 (Tumor necrosis factor superfamily member 5-induced protein 1 homolog)	chaperone-mediated protein complex assembly [GO:0051131]; proteasome assembly [GO:0043248]	hit with GO BP
GN002794	Chromosome_1A	30882	28	399	35.535263260151545	0.4211336109101468	84.98895434462445	361	0.925207756232687	89.88603988603988	54	0.9444444444444444	84.42427726675427	307	0.9218241042345277	71.45569620253164	48	0.75	methylated (>=50%)	Q8TEX9	Importin-4 (Imp4) (Importin-4b) (Imp4b) (Ran-binding protein 4) (RanBP4)	protein import into nucleus [GO:0006606]; protein localization to nucleus [GO:0034504]	hit with GO BP
GN002795	Chromosome_1A	5673	9	42	34.91979552265116	0.2527029176874861	85.13665293897417	41	0.975609756097561	87.66730401529637	14	1	83.50769230769231	27	0.9629629629629629	88.26565726083965	41	0.9512195121951219	methylated (>=50%)	Q9CWZ7	Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma)	intracellular protein transport [GO:0006886]	hit with GO BP
GN004688	Chromosome_1A	7608	8	145	38.590956887486854	0.5123011057690299	80.99070100143061	140	0.8857142857142857	80.23166023166023	33	0.8181818181818182	81.21945543402374	107	0.9065420560747663	3.62400906002265	45	0	methylated (>=50%)	C6EUD4	Succinyl-CoA:acetate/propanoyl-CoA:succinate CoA transferase (EC 2.8.3.18) (EC 2.8.3.27) (Acetate:succinate CoA-transferase) (ASCT) (Propionate:succinate CoA-transferase) (PSCT) (Short-chain acyl-CoA-transferase)	acetate metabolic process [GO:0006083]	hit with GO BP
GN004689	Chromosome_1A	6920	8	201	37.03757225433526	0.847543141269377	0.6756139870355153	201	0	0.676730869338886	35	0	0.6753764393268379	166	0	0.6198347107438017	65	0	unmethylated (<10%)	Q9ULX7	Carbonic anhydrase 14 (EC 4.2.1.1) (Carbonate dehydratase XIV) (Carbonic anhydrase XIV) (CA-XIV)	NA	hit, no GO BP
GN004690	Chromosome_1A	1238	3	31	35.864297253634895	0.7799930898522448	0.39901780233271944	31	0	0.5591054313099042	21	0	0.29910269192422734	10	0	0.5795001810938066	72	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN002799	Chromosome_1A	867	1	18	38.63898500576701	0.5593548387096774	2.380952380952381	18	0	2.380952380952381	18	0	NA	NA	NA	0.18975332068311196	26	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN002800	Chromosome_1A	732	2	13	36.885245901639344	0.5262983242077319	0.31545741324921134	13	0	0.3626473254759746	11	0	0	2	0	0.9541984732824428	64	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN004691	Chromosome_1A	4042	3	112	37.25878278080158	0.7991526620533823	0.6631762652705061	112	0	0.718562874251497	18	0	0.6537282941777324	94	0	0.5265005265005265	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004692	Chromosome_1A	2717	5	72	37.13654766286345	0.782608695652174	0.48532470533857175	72	0	0.5720053835800808	56	0	0.2952029520295203	16	0	0.6056287851799074	39	0	unmethylated (<10%)	Q9ER75	Iroquois-class homeodomain protein IRX-6 (Homeodomain protein IRXB3) (Iroquois homeobox protein 6)	cell development [GO:0048468]; detection of visible light [GO:0009584]; negative regulation of DNA-templated transcription [GO:0045892]; neuron differentiation [GO:0030182]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; retina layer formation [GO:0010842]; retinal bipolar neuron differentiation [GO:0060040]	hit with GO BP
GN004693	Chromosome_1A	1353	1	40	40.354767184035474	0.72619926199262	0.6232686980609419	40	0	0.6232686980609419	40	0	NA	NA	NA	0.8824709185720016	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002789	Chromosome_1A	6680	5	209	42.33532934131737	0.7293749856331747	1.1719288570246795	209	0	1.1824817518248176	202	0	0.9925558312655087	7	0	1.7657445556209534	41	0	unmethylated (<10%)	A2VEC9	SCO-spondin (SCO-spondin pseudogene)	NA	hit, no GO BP
GN002784	Chromosome_1A	11599	14	132	34.70126735063368	0.3797998139534884	83.79145696218868	126	0.9365079365079365	86.25088589652728	25	0.92	83.24392552855791	101	0.9405940594059405	24.660194174757283	32	0.1875	methylated (>=50%)	A4VCH0	Phosphatidylinositol-3-phosphatase SAC1-A (EC 3.1.3.64) (Phosphatidylinositol-4-phosphate phosphatase) (Suppressor of actin mutations 1-like protein A)	phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN002785	Chromosome_1A	2615	4	33	34.11089866156788	0.4363622572815534	92.29229229229229	33	1	91.2280701754386	12	1	92.84627092846272	21	1	30.583911800734995	32	0.25	methylated (>=50%)	Q99MS3	Mpv17-like protein (M-LP)	negative regulation of hydrogen peroxide biosynthetic process [GO:0010730]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; reactive oxygen species metabolic process [GO:0072593]	hit with GO BP
GN004695	Chromosome_1A	20951	17	301	32.924442747362896	0.5312058820160019	84.33385992627699	292	0.9691780821917808	91.64798206278027	30	1	83.71262616644448	262	0.9656488549618321	41.8702023726448	38	0.39473684210526316	methylated (>=50%)	Q4L208	Sodium/hydrogen exchanger 8 (Na(+)/H(+) exchanger 8) (NHE-8) (Solute carrier family 9 member 8)	acrosome assembly [GO:0001675]; Golgi lumen acidification [GO:0061795]; potassium ion transport [GO:0006813]; proton transmembrane transport [GO:1902600]; regulation of intracellular pH [GO:0051453]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]	hit with GO BP
GN004696	Chromosome_1A	13899	8	159	34.22548384775883	0.3933224173066484	70.27027027027027	157	0.7643312101910829	80.03679852805888	33	0.9696969696969697	67.59177494638577	124	0.7096774193548387	9.147286821705427	12	0	methylated (>=50%)	Q6IND4	Endonuclease/exonuclease/phosphatase family domain-containing protein 1	DNA repair [GO:0006281]	hit with GO BP
GN004697	Chromosome_1A	1131	1	36	39.4341290893015	0.8195652173913044	0.5892751915144372	36	0	0.5892751915144372	36	0	NA	NA	NA	0.6464783940115686	40	0	unmethylated (<10%)	P70031	Cholecystokinin receptor (CCK-XLR)	neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN002772	Chromosome_1A	939	7	23	33.22683706070288	0.8875965806345553	0.4583333333333333	23	0	1.0416666666666667	3	0	0.3472222222222222	20	0	1.486146095717884	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002780	Chromosome_1A	4465	3	113	34.82642777155655	0.8351651807735473	0.7714726555803189	113	0	0.43383947939262474	14	0	0.8004467609828742	99	0	0.9016393442622951	55	0	unmethylated (<10%)	O35375	Neuropilin-2 (Vascular endothelial cell growth factor 165 receptor 2)	angiogenesis [GO:0001525]; axon extension involved in axon guidance [GO:0048846]; axon guidance [GO:0007411]; cellular response to leukemia inhibitory factor [GO:1990830]; dorsal root ganglion morphogenesis [GO:1904835]; facial nerve structural organization [GO:0021612]; facioacoustic ganglion development [GO:1903375]; gonadotrophin-releasing hormone neuronal migration to the hypothalamus [GO:0021828]; heart development [GO:0007507]; negative chemotaxis [GO:0050919]; nerve development [GO:0021675]; neural crest cell migration [GO:0001755]; neural crest cell migration involved in autonomic nervous system development [GO:1901166]; neuron migration [GO:0001764]; outflow tract septum morphogenesis [GO:0003148]; regulation of postsynapse organization [GO:0099175]; semaphorin-plexin signaling pathway [GO:0071526]; sensory neuron axon guidance [GO:0097374]; sympathetic ganglion development [GO:0061549]; sympathetic neuron projection extension [GO:0097490]; sympathetic neuron projection guidance [GO:0097491]; trigeminal ganglion development [GO:0061551]; ventral trunk neural crest cell migration [GO:0036486]; vestibulocochlear nerve structural organization [GO:0021649]	hit with GO BP
GN002779	Chromosome_1A	852	1	35	39.08450704225352	1.0773121387283238	0.44150110375275936	35	0	0.44150110375275936	35	0	NA	NA	NA	0.610110400929692	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004699	Chromosome_1A	789	1	18	41.951837769328264	0.518624014022787	29.187396351575455	18	0.05555555555555555	29.187396351575455	18	0.05555555555555555	NA	NA	NA	48.30747531734838	15	0.6	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004700	Chromosome_1A	3950	3	103	41.44303797468354	0.6236338609350905	0.44758539458186103	103	0	0.4400977995110024	49	0	0.45454545454545453	54	0	0.6517016654598118	67	0	unmethylated (<10%)	Q9UBQ7	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)	dicarboxylic acid metabolic process [GO:0043648]; glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN004701	Chromosome_1A	2745	3	91	38.397085610200364	0.8994231766332527	1.1484593837535013	91	0	1.1922503725782414	48	0	1.1220825852782765	43	0	0.7117437722419929	60	0	unmethylated (<10%)	Q91Z53	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)	dicarboxylic acid metabolic process [GO:0043648]; glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN004702	Chromosome_1A	1871	3	76	42.864778193479424	0.8886305830005562	0.34259611724400457	76	0	0.36231884057971014	46	0	0.32076984763432237	30	0	0.9375915616759449	53	0	unmethylated (<10%)	Q9UBQ7	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)	dicarboxylic acid metabolic process [GO:0043648]; glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN004703	Chromosome_1A	2007	1	63	42.351768809167915	0.701421248835042	0.8316008316008316	63	0	0.8316008316008316	63	0	NA	NA	NA	0.6775832862789385	32	0	unmethylated (<10%)	Q6NSJ0	Alpha-galactosidase MYORG (EC 3.2.1.22) (Myogenesis regulating glycosidase) (Nuclear envelope transmembrane protein 37)	carbohydrate metabolic process [GO:0005975]; positive regulation of insulin-like growth factor receptor signaling pathway [GO:0043568]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN004704	Chromosome_1A	6316	4	68	34.57884737175427	0.3661002963833054	65.95989859414611	65	0.7538461538461538	76.32113821138212	21	1	62.92101341281669	44	0.6363636363636364	10.887096774193548	48	0.125	methylated (>=50%)	Q60HE5	Methylenetetrahydrofolate reductase (NADPH) (EC 1.5.1.53)	L-methionine metabolic process [GO:0006555]; tetrahydrofolate interconversion [GO:0035999]	hit with GO BP
GN004705	Chromosome_1A	38032	36	481	36.15376525031552	0.39308491363275994	87.19275123558484	476	0.9642857142857143	89.18545789231477	94	0.9680851063829787	86.85971389017074	382	0.9633507853403142	86.24923265807244	26	0.9615384615384616	methylated (>=50%)	Q8IZH2	5'-3' exoribonuclease 1 (EC 3.1.13.-) (Strand-exchange protein 1 homolog)	cellular response to cycloheximide [GO:0071409]; cellular response to puromycin [GO:1905795]; deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; histone mRNA catabolic process [GO:0071044]; mRNA catabolic process [GO:0006402]; negative regulation of telomere maintenance via telomerase [GO:0032211]; negative regulation of translation [GO:0017148]; nuclear mRNA surveillance [GO:0071028]; nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; response to testosterone [GO:0033574]; rRNA catabolic process [GO:0016075]	hit with GO BP
GN002769	Chromosome_1A	31781	22	363	34.10842956483434	0.3939938838668281	79.9944672414588	337	0.9228486646884273	83.41535433070867	65	0.9692307692307692	79.20567375886525	272	0.9117647058823529	15.425181278839815	22	0.22727272727272727	methylated (>=50%)	Q8CDI7	Coiled-coil domain-containing protein 150	NA	hit, no GO BP
GN004706	Chromosome_1A	4301	12	141	40.47895838177168	0.8007407407407408	0.7351518668988198	141	0	0.7403345215245407	100	0	0.7227332457293035	41	0	0.37154989384288745	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004707	Chromosome_1A	1329	1	65	46.35063957863055	0.9530665607519941	0.5909389363099147	65	0	0.5909389363099147	65	0	NA	NA	NA	0.632577754348972	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004708	Chromosome_1A	2592	6	60	36.03395061728395	0.7164674175938083	0.55356561380657765	60	0	0.8016032064128257	33	0	0.3176620076238882	27	0	2.3052741879147747	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002766	Chromosome_1A	2046	2	77	41.20234604105572	0.8879507614613745	0.6258692628650904	77	0	0.604001510003775	73	0	0.8810572687224669	4	0	0.5785123966942148	77	0	unmethylated (<10%)	Q2YDN1	G protein-coupled receptor 161	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cerebellum development [GO:0021549]; forebrain development [GO:0030900]; limb development [GO:0060173]; negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning [GO:1901621]; regulation of neuron migration [GO:2001222]; skeletal system development [GO:0001501]	hit with GO BP
GN002765	Chromosome_1A	1342	6	41	38.599105812220564	0.8212238805970149	1.4823261117445838	41	0	1.331360946745562	31	0	1.9900497512437811	10	0	37.842669845053635	24	0.20833333333333334	unmethylated (<10%)	Q12962	Transcription initiation factor TFIID subunit 10 (STAF28) (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30)	allantois development [GO:1905069]; chromatin remodeling [GO:0006338]; DNA-templated transcription initiation [GO:0006352]; embryonic placenta development [GO:0001892]; lateral mesodermal cell differentiation [GO:0048371]; limb development [GO:0060173]; mRNA transcription by RNA polymerase II [GO:0042789]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; regulation of DNA repair [GO:0006282]; regulation of DNA-templated transcription [GO:0006355]; regulation of RNA splicing [GO:0043484]; regulation of transcription by RNA polymerase II [GO:0006357]; RNA polymerase II preinitiation complex assembly [GO:0051123]; SAGA complex assembly [GO:0036285]; somitogenesis [GO:0001756]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN004711	Chromosome_1A	750	1	16	43.2	0.4573170731707317	90.94567404426559	16	1	90.94567404426559	16	1	NA	NA	NA	39.509536784741144	12	0.3333333333333333	methylated (>=50%)	O15247	Chloride intracellular channel protein 2 (Glutaredoxin-like oxidoreductase CLIC2) (EC 1.8.-.-) (Glutaredoxin-like peroxidase CLIC2) (EC 1.11.1.-) (XAP121)	chloride transport [GO:0006821]; regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion [GO:0010881]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]; signal transduction [GO:0007165]	hit with GO BP
GN004712	Chromosome_1A	546	1	13	40.65934065934066	0.5916479119779945	1.3671875	13	0	1.3671875	13	0	NA	NA	NA	25.458052073288332	54	0.2037037037037037	unmethylated (<10%)	Q5SVZ6	Zinc finger MYM-type protein 1	NA	hit, no GO BP
GN002762	Chromosome_1A	14098	9	127	34.6077457795432	0.30127124989693704	76.36482939632546	126	0.9047619047619048	85.4077253218884	17	1	75.10466507177034	109	0.8899082568807339	78.8702928870293	17	0.8823529411764706	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002761	Chromosome_1A	6306	7	78	34.617824294322865	0.4176158940397351	87.95407491059665	78	0.9102564102564102	91.7516218721038	16	1	86.98630136986301	62	0.8870967741935484	31.903686982693756	25	0.44	methylated (>=50%)	Q3T0Z5	Leukocyte receptor cluster member 1 homolog	NA	hit, no GO BP
GN002760	Chromosome_1A	21279	16	253	36.28929930917806	0.36322890196061497	79.92472569533044	236	0.8940677966101694	70.90570719602978	29	0.7586206896551724	80.9584755403868	207	0.9130434782608695	49.14965986394558	35	0.4857142857142857	methylated (>=50%)	Q2XWK0	Synaptic vesicle 2-related protein (SV2-related protein)	NA	hit, no GO BP
GN004714	Chromosome_1A	2998	6	76	37.19146097398266	0.7382226772592372	7.526098567613499	76	0	6.475485661424607	40	0	8.686765457332651	36	0	8.603351955307263	31	0	unmethylated (<10%)	Q61143	Short transient receptor potential channel 6 (TrpC6) (Calcium entry channel) (Transient receptor protein 6) (TRP-6)	calcium ion transmembrane transport [GO:0070588]; cellular response to hydrogen peroxide [GO:0070301]; negative regulation of dendrite morphogenesis [GO:0050774]; positive regulation of calcium ion transport [GO:0051928]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of ion transmembrane transporter activity [GO:0032414]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of peptidyl-threonine phosphorylation [GO:0010800]; regulation of cytosolic calcium ion concentration [GO:0051480]; single fertilization [GO:0007338]	hit with GO BP
GN018743	Chromosome_1A	521	2	18	40.49904030710173	0.8587912087912087	19.878296146044626	18	0	22.04724409448819	13	0	0	5	0	3.3333333333333335	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004715	Chromosome_1A	2063	3	27	44.15899175957344	0.26846443030653555	NA	0	NA	NA	NA	NA	NA	NA	NA	1.5112631879098946	65	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002751	Chromosome_1A	1392	1	62	47.77298850574713	0.7814135414591746	14.49814126394052	33	0	14.49814126394052	33	0	NA	NA	NA	2.8776978417266186	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004717	Chromosome_1A	5726	4	154	38.00209570380719	0.7449336211229709	1.269546369407029	154	0	1.008533747090768	43	0	1.3346228239845261	111	0	0.6320541760722348	51	0	unmethylated (<10%)	Q55CU8	Phosphatidylinositol transfer protein 3 (CRAL-TRIO domain-containing protein pitC) (Random slug protein 5)	NA	hit, no GO BP
GN004718	Chromosome_1A	920	2	16	36.84782608695652	0.5151536361727445	0.9803921568627451	7	0	0.9803921568627451	7	0	NA	NA	NA	0.9859154929577465	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004719	Chromosome_1A	378	1	15	41.7989417989418	0.9090909090909091	0.3780718336483932	15	0	0.3780718336483932	15	0	NA	NA	NA	1.4755197853789404	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002755	Chromosome_1A	2598	4	89	41.37798306389531	0.8053709508881922	0.7328447701532311	88	0	0.8585630366018979	64	0	0.38022813688212925	24	0	1.392515230635335	40	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN002756	Chromosome_1A	3155	6	22	33.75594294770206	0.2448013656114215	1.2875536480686696	22	0	1.9230769230769231	10	0	0.6925207756232687	12	0	0.4794520547945205	60	0	unmethylated (<10%)	Q58CW6	Calcium-responsive transcription factor (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein)	cellular response to calcium ion [GO:0071277]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN002757	Chromosome_1A	1461	1	51	41.889117043121146	0.8034743788819876	0.6809338521400778	51	0	0.6809338521400778	51	0	NA	NA	NA	0.5392450569203115	36	0	unmethylated (<10%)	P56590	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) (Cytochrome P450 form 6) (Cytochrome P450-C) (Cytochrome P450-P1) (DAH1) (Hydroperoxy icosatetraenoate dehydratase) (EC 4.2.1.152)	estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; toxin metabolic process [GO:0009404]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN003314	Chromosome_1A	1094	1	31	46.983546617915906	0.5134983723219018	0.6521739130434783	31	0	0.6521739130434783	31	0	NA	NA	NA	0.430416068866571	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004721	Chromosome_1A	810	1	0	56.2962962962963	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN002731	Chromosome_1A	252	1	16	47.61904761904762	1.158953722334004	75.3623188405797	16	1	75.3623188405797	16	1	NA	NA	NA	73.1638418079096	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002732	Chromosome_1A	5917	10	76	36.03177285786716	0.3977533655291974	57.34478439792449	76	0.6578947368421053	64.66472303206997	24	0.75	54.1042849767682	52	0.6153846153846154	0.3849855630413859	47	0	methylated (>=50%)	O15995	G1/S-specific cyclin-E	NA	hit, no GO BP
GN004723	Chromosome_1A	15493	11	209	34.544633060091655	0.45220096318542474	85.04081058260626	209	0.9473684210526315	87.38884397736459	22	0.9545454545454546	84.81695568400771	187	0.946524064171123	82.44803695150115	9	1	methylated (>=50%)	Q1NZ26	Uncharacterized protein F13E9.13, mitochondrial	NA	hit, no GO BP
GN002734	Chromosome_1A	3208	2	38	34.85037406483791	0.3913199794555727	75	38	0.868421052631579	68.57142857142857	4	0.75	75.60975609756098	34	0.8823529411764706	59.86185725249425	36	0.4722222222222222	methylated (>=50%)	Q91X96	Guanine nucleotide exchange factor MSS4 (Rab-interacting factor)	post-Golgi vesicle-mediated transport [GO:0006892]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN002735	Chromosome_1A	3199	10	45	34.32322600812754	0.47762585559909354	86.13611811307166	45	0.9111111111111111	88.41955386805886	35	0.9142857142857143	78.95522388059702	10	0.9	25.022665457842248	62	0.3064516129032258	methylated (>=50%)	P44121	DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])	DNA recombination [GO:0006310]; DNA repair [GO:0006281]	hit with GO BP
GN002736	Chromosome_1A	7006	9	70	34.14216385954896	0.3460507440422639	86.26453488372093	70	0.9857142857142858	89.21348314606742	24	1	84.85499462943072	46	0.9782608695652174	88.72901678657074	27	1	methylated (>=50%)	Q9WTK3	GPI-anchor transamidase component GPAA1 (GAA1 protein homolog) (mGAA1) (Glycosylphosphatidylinositol anchor attachment 1 protein) (GPI anchor attachment protein 1)	attachment of GPI anchor to protein [GO:0016255]; GPI anchor biosynthetic process [GO:0006506]; GPI anchored protein biosynthesis [GO:0180046]	hit with GO BP
GN004725	Chromosome_1A	1230	1	28	38.699186991869915	0.6192017259978425	93.0795847750865	22	1	93.0795847750865	22	1	NA	NA	NA	91.02416570771001	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004726	Chromosome_1A	11409	8	135	36.38355684109037	0.35901242475777034	85.52490146900752	130	0.9153846153846154	70.48780487804878	18	0.7777777777777778	87.15742089236065	112	0.9375	7.110912343470483	42	0.047619047619047616	methylated (>=50%)	P00125	Cytochrome c1, heme protein, mitochondrial (EC 7.1.1.8) (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)	mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]	hit with GO BP
GN004727	Chromosome_1A	9526	15	125	33.74973756036112	0.46254322443611096	87.54499640028797	125	0.992	80.36723163841808	12	1	88.21138211382114	113	0.9911504424778761	91.07861060329067	39	1	methylated (>=50%)	P08059	Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Autocrine motility factor) (AMF) (D-hexose-6-phosphate anomerase) (Glucose-6-phosphate C2-epimerase) (EC 5.1.3.-) (Neuroleukin) (NLK) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI)	canonical glycolysis [GO:0061621]; fructose 6-phosphate metabolic process [GO:0006002]; gluconeogenesis [GO:0006094]; glucose 6-phosphate metabolic process [GO:0051156]; glycolytic process [GO:0006096]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of immunoglobulin production [GO:0002639]	hit with GO BP
GN004728	Chromosome_1A	9998	6	121	34.136827365473096	0.4155787318534397	91.8743095618019	121	0.9834710743801653	94.00656814449918	31	1	91.49949487660557	90	0.9777777777777777	95.19417475728156	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002741	Chromosome_1A	15553	4	159	33.761975181636984	0.36058517133185986	42.17335058214748	157	0.37579617834394907	69.15995397008055	18	0.6111111111111112	39.383846794338055	139	0.34532374100719426	1.1242973141786383	32	0	sparse (10-50%)	Q9I8M9	Twisted gastrulation protein homolog 1-B	regulation of BMP signaling pathway [GO:0030510]	hit with GO BP
GN002742	Chromosome_1A	2644	6	79	37.481089258698944	0.8515818656229616	0.591715976331361	12	0	0.684931506849315	11	0	0	1	0	0.819672131147541	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002743	Chromosome_1A	2644	6	79	37.556732223903175	0.8482618583495777	0.1988071570576541	25	0	0.2717391304347826	20	0	0	5	0	0.819672131147541	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004730	Chromosome_1A	270	1	8	44.074074074074076	0.6101694915254238	95.48872180451127	8	1	95.48872180451127	8	1	NA	NA	NA	78.64583333333333	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004731	Chromosome_1A	864	1	19	42.708333333333336	0.4895330112721417	93.28537170263789	19	1	93.28537170263789	19	1	NA	NA	NA	90.82840236686391	15	1	methylated (>=50%)	Q6P4M5	Glucose-fructose oxidoreductase domain-containing protein 1	NA	hit, no GO BP
GN004732	Chromosome_1A	8464	5	105	36.991965973534974	0.3630036270953828	85.45962950017477	105	0.9333333333333333	95.42483660130719	10	1	84.59053771613148	95	0.9263157894736842	93.52941176470588	36	1	methylated (>=50%)	P08761	Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Ecdysone-induced protein 28/29 kDa) (Methionine-S-sulfoxide reductase) (Peptide-methionine (S)-S-oxide reductase)	cellular response to oxidative stress [GO:0034599]; determination of adult lifespan [GO:0008340]; response to oxidative stress [GO:0006979]; sulfur amino acid metabolic process [GO:0000096]	hit with GO BP
GN004733	Chromosome_1A	2784	4	39	36.27873563218391	0.42725430398425973	89.41845212068212	39	0.9487179487179487	88.91257995735607	33	0.9393939393939394	91.72749391727494	6	1	48.73015873015873	42	0.5	methylated (>=50%)	Q7TQE7	Putative tyrosine carboxypeptidase MATCAP2 (EC 3.4.17.-)	NA	hit, no GO BP
GN004734	Chromosome_1A	1736	3	17	38.24884792626728	0.2695282889629663	86.58227848101266	17	1	84.1726618705036	5	1	87.890625	12	1	78.11572700296736	19	0.7894736842105263	methylated (>=50%)	C7G3A0	Metallophosphoesterase 1 (EC 3.1.-.-) (Post-GPI attachment to proteins factor 5)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; GPI anchor biosynthetic process [GO:0006506]; GPI anchor remodelling [GO:0120574]	hit with GO BP
GN004735	Chromosome_1A	5151	1	142	38.594447680062125	0.7533843182696022	3.480498374864572	142	0	3.480498374864572	142	0	NA	NA	NA	3.8630027877339703	48	0	unmethylated (<10%)	F4KGU4	ATP-dependent RNA helicase DEAH12, chloroplastic (EC 3.6.4.13)	protein targeting [GO:0006605]	hit with GO BP
GN004736	Chromosome_1A	8571	1	175	38.17524209543811	0.5661651827993437	0.5468087112284341	175	0	0.5468087112284341	175	0	NA	NA	NA	0.4550625711035267	44	0	unmethylated (<10%)	F4KGU4	ATP-dependent RNA helicase DEAH12, chloroplastic (EC 3.6.4.13)	protein targeting [GO:0006605]	hit with GO BP
GN002729	Chromosome_1A	486	1	6	43.20987654320987	0.2648741938414025	0.91324200913242	6	0	0.91324200913242	6	0	NA	NA	NA	0.5557025668166181	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005579	Chromosome_1A	306	1	25	54.90196078431372	1.1426437640029874	2.8790786948176583	25	0	2.8790786948176583	25	0	NA	NA	NA	4.655172413793103	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002728	Chromosome_1A	7929	1	160	37.8862403834027	0.5737700469458088	0.7771476580550305	159	0	0.7771476580550305	159	0	NA	NA	NA	2.1176470588235294	15	0	unmethylated (<10%)	F4KGU4	ATP-dependent RNA helicase DEAH12, chloroplastic (EC 3.6.4.13)	protein targeting [GO:0006605]	hit with GO BP
GN002727	Chromosome_1A	692	2	16	38.872832369942195	0.6134751773049646	0.5298013245033113	15	0	0.5502063273727648	14	0	0	1	0	9.986902423051735	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002726	Chromosome_1A	8721	1	151	37.94289645682834	0.4899321543054262	9.373179056022643	150	0.09333333333333334	9.373179056022643	150	0.09333333333333334	NA	NA	NA	80.43347381095725	47	0.9787234042553191	unmethylated (<10%)	F4KGU4	ATP-dependent RNA helicase DEAH12, chloroplastic (EC 3.6.4.13)	protein targeting [GO:0006605]	hit with GO BP
GN004739	Chromosome_1A	516	1	6	45.93023255813954	0.24803717352988303	0	6	0	0	6	0	NA	NA	NA	4.576271186440678	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004740	Chromosome_1A	1161	1	20	46.51162790697674	0.32530576219896606	3.3398821218074657	16	0	3.3398821218074657	16	0	NA	NA	NA	2.0454545454545454	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004741	Chromosome_1A	2904	3	81	36.294765840220386	0.8473242846027492	1.063264221158958	81	0	1.312785388127854	47	0	0.845771144278607	34	0	1.4627941488234046	67	0	unmethylated (<10%)	P34269	Putative tyrosinase-like protein tyr-1	NA	hit, no GO BP
GN002723	Chromosome_1A	879	3	24	34.129692832764505	0.9376	0.3970880211780278	24	0	0.2358490566037736	7	0	0.45998160073597055	17	0	0.6578947368421053	35	0	unmethylated (<10%)	P51909	Apolipoprotein D (Apo-D) (ApoD)	brain development [GO:0007420]; glucose metabolic process [GO:0006006]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of lipoprotein lipid oxidation [GO:0060588]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of smooth muscle cell-matrix adhesion [GO:2000098]; negative regulation of T cell migration [GO:2000405]; peripheral nervous system axon regeneration [GO:0014012]; response to axon injury [GO:0048678]; response to reactive oxygen species [GO:0000302]; tissue regeneration [GO:0042246]	hit with GO BP
GN002721	Chromosome_1A	338	2	6	33.43195266272189	0.6365348399246704	0.3133159268929504	6	0	0.3795066413662239	5	0	0	1	0	0.5132473297267305	47	0	unmethylated (<10%)	P05090	Apolipoprotein D (Apo-D) (ApoD)	angiogenesis [GO:0001525]; brain development [GO:0007420]; glucose metabolic process [GO:0006006]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of lipoprotein lipid oxidation [GO:0060588]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of smooth muscle cell-matrix adhesion [GO:2000098]; negative regulation of T cell migration [GO:2000405]; peripheral nervous system axon regeneration [GO:0014012]; response to axon injury [GO:0048678]; response to reactive oxygen species [GO:0000302]; tissue regeneration [GO:0042246]	hit with GO BP
GN002711	Chromosome_1A	1096	2	12	36.04014598540146	0.337196185006666	0.6094906399651719	12	0	0.5641748942172073	11	0	1.1764705882352942	1	0	0.6231136208743063	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002717	Chromosome_1A	602	3	11	32.89036544850498	0.6759212003674594	0.4722550177095632	9	0	0.5788712011577424	7	0	0	2	0	0.561052738957462	54	0	unmethylated (<10%)	P05090	Apolipoprotein D (Apo-D) (ApoD)	angiogenesis [GO:0001525]; brain development [GO:0007420]; glucose metabolic process [GO:0006006]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of lipoprotein lipid oxidation [GO:0060588]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of smooth muscle cell-matrix adhesion [GO:2000098]; negative regulation of T cell migration [GO:2000405]; peripheral nervous system axon regeneration [GO:0014012]; response to axon injury [GO:0048678]; response to reactive oxygen species [GO:0000302]; tissue regeneration [GO:0042246]	hit with GO BP
GN004742	Chromosome_1A	1094	2	11	35.831809872029254	0.3132548937942524	0.9025270758122743	11	0	1.1135857461024499	10	0	0	1	0	0.703905540417802	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002714	Chromosome_1A	1080	2	12	35.55555555555556	0.3518010803767746	0.6127450980392157	12	0	0.5511811023622047	10	0	0.8287292817679558	2	0	0.6793206793206793	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002719	Chromosome_1A	1013	4	18	34.35340572556762	0.6024382991376747	0.49854590776900704	10	0	0.5759162303664922	8	0	0.2012072434607646	2	0	1.0230849947534102	55	0	unmethylated (<10%)	P51909	Apolipoprotein D (Apo-D) (ApoD)	brain development [GO:0007420]; glucose metabolic process [GO:0006006]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of lipoprotein lipid oxidation [GO:0060588]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of smooth muscle cell-matrix adhesion [GO:2000098]; negative regulation of T cell migration [GO:2000405]; peripheral nervous system axon regeneration [GO:0014012]; response to axon injury [GO:0048678]; response to reactive oxygen species [GO:0000302]; tissue regeneration [GO:0042246]	hit with GO BP
GN002708	Chromosome_1A	2828	2	110	43.387553041018386	0.8280451448040886	0.5403158769742311	103	0	0.485201358563804	85	0	0.8695652173913043	18	0	0.370495116200741	46	0	unmethylated (<10%)	P86952	Tyrosinase-like protein (Tyrosinase-2)	NA	hit, no GO BP
GN004744	Chromosome_1A	2844	3	102	41.420534458509145	0.8365863787375415	0.74360499702558	102	0	0.7914523149980214	85	0	0.5988023952095808	17	0	0.5484460694698354	40	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN004745	Chromosome_1A	1620	1	44	39.93827160493827	0.6811926605504587	0.49460431654676257	44	0	0.49460431654676257	44	0	NA	NA	NA	0.6954102920723226	43	0	unmethylated (<10%)	Q8TB52	F-box only protein 30	protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN004746	Chromosome_1A	3823	4	125	38.92231232016741	0.8675512679001947	0.7901234567901234	123	0	0.7508044333214158	97	0	0.8778930566640064	26	0	0.5332385353714895	52	0	unmethylated (<10%)	H2A0L1	Tyrosinase-like protein 2 (EC 1.14.18.-) (Tyrosinase 2)	NA	hit, no GO BP
GN002704	Chromosome_1A	1374	1	51	41.048034934497814	0.8899415798831598	0.3925967470555244	51	0	0.3925967470555244	51	0	NA	NA	NA	0.5802707930367504	46	0	unmethylated (<10%)	P58390	Small conductance calcium-activated potassium channel protein 2 (SK2) (SKCa 2) (SKCa2) (KCa2.2)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic ion transport [GO:0006811]; positive regulation of potassium ion transport [GO:0043268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of potassium ion transmembrane transport [GO:1901379]	hit with GO BP
GN004748	Chromosome_1A	1035	2	31	38.84057971014493	0.811046511627907	2.562373567093729	31	0	3.100088573959256	24	0	0.847457627118644	7	0	0.4375497215592681	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002700	Chromosome_1A	21525	13	382	37.045296167247386	0.517347504846112	77.57297097582003	349	0.9255014326647565	81.40947752126367	14	0.9285714285714286	77.43881713120327	335	0.9253731343283582	48.15450643776824	35	0.5428571428571428	methylated (>=50%)	A7RRJ0	Flap endonuclease 1 (FEN-1) (EC 3.1.-.-) (Flap structure-specific endonuclease 1)	base-excision repair [GO:0006284]; DNA replication, removal of RNA primer [GO:0043137]	hit with GO BP
GN004749	Chromosome_1A	435	1	19	45.05747126436781	0.8785076530612245	0.411522633744856	19	0	0.411522633744856	19	0	NA	NA	NA	0.24691358024691357	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004750	Chromosome_1A	651	1	34	43.625192012288785	1.0981890349789134	0.9795918367346939	34	0	0.9795918367346939	34	0	NA	NA	NA	1.1874469889737065	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004751	Chromosome_1A	28243	28	391	34.80154374535283	0.45780105680076083	83.49808531480987	367	0.9346049046321526	88.38649736760607	62	0.9838709677419355	82.67720630297987	305	0.9245901639344263	82.04697986577182	20	0.95	methylated (>=50%)	O60308	Centrosomal protein of 104 kDa (Cep104)	NA	hit, no GO BP
GN004752	Chromosome_1A	1053	1	33	43.39981006647673	0.6690219484020024	93.59916054564533	30	1	93.59916054564533	30	1	NA	NA	NA	88.14847942754919	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004753	Chromosome_1A	5112	5	58	34.076682316118934	0.3913208742477035	90.89537223340041	58	1	96.0088691796009	15	1	89.39492517891998	43	1	94.77311889718553	40	1	methylated (>=50%)	O54788	DNA fragmentation factor subunit beta (EC 3.-.-.-) (Caspase-activated deoxyribonuclease) (CAD) (Caspase-activated DNase) (DNA fragmentation factor 40 kDa subunit) (DFF-40)	apoptotic chromosome condensation [GO:0030263]; apoptotic DNA fragmentation [GO:0006309]; DNA catabolic process [GO:0006308]; negative regulation of apoptotic DNA fragmentation [GO:1902511]	hit with GO BP
GN004754	Chromosome_1A	5161	7	44	33.90815733385003	0.29922743546259656	74.95469372961217	44	0.75	60.53639846743295	11	0.5454545454545454	78.31917746982566	33	0.8181818181818182	0.5813953488372093	41	0	methylated (>=50%)	Q6TH22	Protein DDI1 homolog 2 (EC 3.4.23.-)	cellular response to hydroxyurea [GO:0072711]; proteasomal protein catabolic process [GO:0010498]; protein processing [GO:0016485]; regulation of DNA stability [GO:0097752]; regulation of protein stability [GO:0031647]	hit with GO BP
GN004355	Chromosome_1A	1224	1	31	38.888888888888886	0.6855532268555322	0.5733005733005733	31	0	0.5733005733005733	31	0	NA	NA	NA	0.5546075085324232	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004755	Chromosome_1A	492	1	15	41.666666666666664	0.7098884186225471	0.2604166666666667	15	0	0.2604166666666667	15	0	NA	NA	NA	0.5473684210526316	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004756	Chromosome_1A	2388	6	49	37.6465661641541	0.5836301062397127	0.5586592178770949	49	0	0.47974413646055436	40	0	0.8869179600886918	9	0	0.5459057071960298	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004757	Chromosome_1A	969	4	10	42.31166150670795	0.2375	0.847457627118644	10	0	0.4983388704318937	8	0	1.4619883040935673	2	0	0.7028112449799196	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004758	Chromosome_1A	3321	2	95	35.80246913580247	0.89662375309063	0.5842696629213483	95	0	0.7725736359246741	54	0	0.4203446826397646	41	0	0.6215722120658135	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002619	Chromosome_1A	380	1	8	44.473684210526315	0.4282896590588898	0.2631578947368421	8	0	0.2631578947368421	8	0	NA	NA	NA	0.3723861357777141	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002620	Chromosome_1A	369	1	18	47.15447154471545	0.8917830290010741	0.7309941520467836	18	0	0.7309941520467836	18	0	NA	NA	NA	1.0071942446043165	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004759	Chromosome_1A	14695	17	413	37.12827492344335	0.8161135575998842	0.5330256072095835	413	0	0.5825402034788316	306	0	0.43261231281198004	107	0	0.5346088913899831	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004760	Chromosome_1A	9309	14	221	34.09603609410248	0.8197242495516456	0.8301830850196428	221	0	0.7857733664185277	93	0	0.8549971114962449	128	0	0.7427055702917772	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004761	Chromosome_1A	2493	6	65	35.4191736863217	0.8317165558019216	0.7471264367816092	65	0	1.2114537444933922	21	0	0.583203732503888	44	0	0.24271844660194175	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004762	Chromosome_1A	627	1	17	38.27751196172249	0.741495652173913	0.7309941520467836	17	0	0.7309941520467836	17	0	NA	NA	NA	0.28606456885982834	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004763	Chromosome_1A	7989	19	241	38.35273501063963	0.8210446998058422	0.5299161768956547	241	0	0.48599199542595767	163	0	0.6207508128879693	78	0	0.8576998050682261	60	0	unmethylated (<10%)	B4LZT9	Protein hedgehog (EC 3.1.-.-) [Cleaved into: Protein hedgehog N-product]	cell fate specification [GO:0001708]; cell-cell signaling [GO:0007267]; intein-mediated protein splicing [GO:0016539]; protein autoprocessing [GO:0016540]; regulation of gene expression [GO:0010468]; segment polarity determination [GO:0007367]; smoothened signaling pathway [GO:0007224]; system development [GO:0048731]	hit with GO BP
GN004764	Chromosome_1A	580	2	11	40.3448275862069	0.4728377677314163	0.16835016835016836	11	0	0.2724795640326976	7	0	0	4	0	0.4697040864255519	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004765	Chromosome_1A	2944	3	50	35.63179347826087	0.5366621944817127	60.44935805991441	50	0.62	35.86854460093897	30	0.36666666666666664	75.50316273720529	20	1	0.6790564689063617	74	0	methylated (>=50%)	Q60414	Ileal sodium/bile acid cotransporter (Apical sodium-dependent bile acid transporter) (ASBT) (Ileal Na(+)/bile acid cotransporter) (Ileal sodium-dependent bile acid transporter) (IBAT) (ISBT) (Na(+)-dependent ileal bile acid transporter) (Sodium/taurocholate cotransporting polypeptide, ileal) (Solute carrier family 10 member 2)	NA	hit, no GO BP
GN004766	Chromosome_1A	436	2	4	36.92660550458716	0.2919317040508872	80.66037735849056	4	1	82.3943661971831	3	1	77.14285714285714	1	1	32.27689741451209	52	0.3269230769230769	NA	Q9UK23	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (EC 3.1.4.45) (Mannose 6-phosphate-uncovering enzyme) (Phosphodiester alpha-GlcNAcase)	carbohydrate metabolic process [GO:0005975]; lysosome organization [GO:0007040]; protein modification process [GO:0036211]; protein targeting to lysosome [GO:0006622]; secretion of lysosomal enzymes [GO:0033299]	hit with GO BP
GN004767	Chromosome_1A	886	2	20	41.19638826185101	0.5323559454425284	84.31372549019608	4	1	84.31372549019608	4	1	NA	NA	NA	92.21374045801527	35	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004768	Chromosome_1A	4479	4	44	34.070104934137085	0.3510231853132965	85.3244390539721	44	1	85.33333333333333	23	1	85.3163087637841	21	1	42.88668320926386	22	0.6363636363636364	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004769	Chromosome_1A	3762	10	100	37.134502923976605	0.7711449924771342	0.6774789570929994	100	0	0.6448839208942391	48	0	0.7072691552062869	52	0	0.48613096940234485	65	0	unmethylated (<10%)	O35874	Neutral amino acid transporter A (Alanine/serine/cysteine/threonine transporter 1) (ASCT-1) (Solute carrier family 1 member 4)	cognition [GO:0050890]; hydroxyproline transport [GO:0034589]; L-alanine import across plasma membrane [GO:1904273]; L-alanine transport [GO:0015808]; L-aspartate import across plasma membrane [GO:0140009]; L-cystine transport [GO:0015811]; L-glutamate transmembrane transport [GO:0015813]; L-serine import across plasma membrane [GO:1903812]; L-serine transport [GO:0015825]; proline transport [GO:0015824]; serine import across plasma membrane [GO:0098718]; threonine transport [GO:0015826]	hit with GO BP
GN004770	Chromosome_1A	1106	3	47	41.500904159132006	0.9882885280809156	0.7608178792201616	47	0	0.8928571428571429	32	0	0.574052812858783	15	0	0.5387931034482759	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004771	Chromosome_1A	486	1	12	36.62551440329218	0.737108190091001	0	12	0	0	12	0	NA	NA	NA	0.6024096385542169	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004772	Chromosome_1A	894	1	45	41.49888143176734	1.1808735470235998	1.9406392694063928	45	0	1.9406392694063928	45	0	NA	NA	NA	0.8925506350841057	59	0	unmethylated (<10%)	O96006	E3 SUMO-protein ligase ZBED1 (EC 2.3.2.-) (DNA replication-related element-binding factor) (Putative Ac-like transposable element) (Zinc finger BED domain-containing protein 1) (dREF homolog)	host-mediated suppression of viral genome replication [GO:0044828]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autosumoylation [GO:1990466]; protein sumoylation [GO:0016925]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004773	Chromosome_1A	1479	2	64	47.12643678160919	0.779408132009288	0.5730659025787965	60	0	0.6045949214026602	57	0	0	3	0	0.5167958656330749	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004774	Chromosome_1A	2058	6	44	33.18756073858115	0.7778579527883723	32.87047575688595	44	0.06818181818181818	31.560125167635224	25	0.12	34.23005565862709	19	0	23.234836702954897	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004775	Chromosome_1A	36374	70	909	35.0909990652664	0.8123090098978766	0.8336125179827759	907	0	0.8919432665594386	258	0	0.8120868744098206	649	0	0.4308656482569526	33	0	unmethylated (<10%)	P29995	Inositol 1,4,5-trisphosphate-gated calcium channel ITPR2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Inositol 1,4,5-trisphosphate receptor type 2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)	calcium ion transport [GO:0006816]; cellular response to cAMP [GO:0071320]; cellular response to ethanol [GO:0071361]; cellular response to hypoxia [GO:0071456]; release of sequestered calcium ion into cytosol [GO:0051209]; response to hypoxia [GO:0001666]	hit with GO BP
GN004776	Chromosome_1A	17326	20	300	35.380353226365	0.5534887960527213	48.51613600735175	300	0.43666666666666665	24.554997717937017	52	0.21153846153846154	51.735344616139315	248	0.4838709677419355	88.57383492419989	81	1	sparse (10-50%)	Q3SZH6	Probable tubulin polyglutamylase TTLL9 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 9)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN004777	Chromosome_1A	8596	9	72	34.783620288506285	0.27743948359332976	85.12189564821144	69	0.9710144927536232	79.7799174690509	14	0.9285714285714286	86.18241398143091	55	0.9818181818181818	72.87829541350668	49	0.7551020408163265	methylated (>=50%)	Q28FE8	tRNA-specific adenosine deaminase 1 (EC 3.5.4.34) (tRNA-specific adenosine-37 deaminase)	tRNA processing [GO:0008033]	hit with GO BP
GN004778	Chromosome_1A	13247	14	171	35.396693591001736	0.41813805714066316	80.00354390006201	167	0.8323353293413174	92.31066460587326	48	0.9583333333333334	76.342108288309	119	0.7815126050420168	26.433691756272403	47	0.5957446808510638	methylated (>=50%)	Q13523	Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1) (PRP4 kinase) (PRP4 pre-mRNA-processing factor 4 homolog)	mRNA cis splicing, via spliceosome [GO:0045292]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of hippo signaling [GO:0035332]; positive regulation of protein export from nucleus [GO:0046827]; regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090266]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	hit with GO BP
GN004779	Chromosome_1A	2637	1	80	40.87978763746682	0.7261662168860494	0.6753904601097509	79	0	0.6753904601097509	79	0	NA	NA	NA	1.6431924882629108	27	0	unmethylated (<10%)	Q8SPE9	Toll-like receptor 4 (CD antigen CD284)	defense response to Gram-negative bacterium [GO:0050829]; detection of lipopolysaccharide [GO:0032497]; immune response [GO:0006955]; inflammatory response [GO:0006954]; macrophage activation [GO:0042116]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; regulation of tumor necrosis factor production [GO:0032680]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN004780	Chromosome_1A	984	1	32	37.09349593495935	0.9522772636545092	0.7912087912087912	32	0	0.7912087912087912	32	0	NA	NA	NA	0.4157139887757223	53	0	unmethylated (<10%)	Q0PV50	Toll-like receptor 3 (CD antigen CD283)	defense response to virus [GO:0051607]; inflammatory response to wounding [GO:0090594]; innate immune response [GO:0045087]; intracellular signal transduction [GO:0035556]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of chemokine production [GO:0032722]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JNK cascade [GO:0046330]; response to exogenous dsRNA [GO:0043330]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN004781	Chromosome_1A	1179	1	27	36.895674300254456	0.6768082663605052	0.31857279388340237	27	0	0.31857279388340237	27	0	NA	NA	NA	0.5955678670360111	62	0	unmethylated (<10%)	Q7TQ62	Podocan	negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]	hit with GO BP
GN004782	Chromosome_1A	2607	1	71	36.90065209052551	0.8002049180327869	0.6654835847382431	71	0	0.6654835847382431	71	0	NA	NA	NA	0.6793734666918286	55	0	unmethylated (<10%)	Q7TQ62	Podocan	negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]	hit with GO BP
GN004783	Chromosome_1A	1374	1	64	44.03202328966521	0.9610491803278689	0.6283662477558348	64	0	0.6283662477558348	64	0	NA	NA	NA	0.4631494160289972	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004784	Chromosome_1A	747	1	14	43.373493975903614	0.4090269086357947	83.02583025830258	11	1	83.02583025830258	11	1	NA	NA	NA	56.884343036978755	11	0.5454545454545454	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004785	Chromosome_1A	580	2	18	44.827586206896555	0.625	97.88732394366197	18	1	98.17295980511571	17	1	90.3225806451613	1	1	9.967113584619277	56	0.17857142857142858	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004786	Chromosome_1A	49770	33	655	35.25215993570424	0.42674612680896185	74.31409087304733	632	0.875	91.49019994090416	201	0.9800995024875622	69.98585292000695	431	0.8259860788863109	8.633274603574126	54	0.1111111111111111	methylated (>=50%)	Q5TZA2	Rootletin (Ciliary rootlet coiled-coil protein)	centriole-centriole cohesion [GO:0010457]; centrosome cycle [GO:0007098]; intracellular protein localization [GO:0008104]; positive regulation of cilium assembly [GO:0045724]; positive regulation of protein localization to cilium [GO:1903566]	hit with GO BP
GN004787	Chromosome_1A	8731	12	125	35.96380712404078	0.44718147116813983	85.11584051724138	125	0.824	71.65354330708661	24	0.5	86.94720734506504	101	0.900990099009901	1.146025878003697	64	0	methylated (>=50%)	P31029	Alanine--glyoxylate aminotransferase (AGT) (EC 2.6.1.44) (Serine--pyruvate aminotransferase, mitochondrial) (SPT) (EC 2.6.1.51)	glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN004788	Chromosome_1A	60306	26	846	35.61503001359732	0.4424182479435163	82.58811388060036	805	0.9739130434782609	89.0556716701501	110	0.990909090909091	81.72220808954465	695	0.9712230215827338	0.5530253741054001	59	0	methylated (>=50%)	O15013	Rho guanine nucleotide exchange factor 10	actin cytoskeleton organization [GO:0030036]; centrosome duplication [GO:0051298]; mitotic spindle assembly [GO:0090307]; myelination in peripheral nervous system [GO:0022011]; positive regulation of Rho protein signal transduction [GO:0035025]; positive regulation of stress fiber assembly [GO:0051496]; regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN004789	Chromosome_1A	742	2	11	42.99191374663073	0.32281284606866	1.8927444794952681	11	0	2.4489795918367347	8	0	0	3	0	1.1909736732135394	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004790	Chromosome_1A	1677	1	61	42.87418008348241	0.7931967619874698	1.1332973556395034	61	0	1.1332973556395034	61	0	NA	NA	NA	0.49652432969215493	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004791	Chromosome_1A	13741	19	167	34.21148388035805	0.4169698738304477	83.66791675858519	167	0.9880239520958084	90.4487917146145	31	1	82.6743107663772	136	0.9852941176470589	88.32968636032093	19	1	methylated (>=50%)	P56399	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Isopeptidase T) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)	negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell mediated immune response to tumor cell [GO:0002841]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; protein K48-linked deubiquitination [GO:0071108]; regulation of mitotic cell cycle [GO:0007346]; regulation protein catabolic process at presynapse [GO:0140251]	hit with GO BP
GN002677	Chromosome_1A	4694	5	48	34.1925862803579	0.35172904724438947	90.38011695906432	48	0.9791666666666666	91.38959931798806	16	0.9375	89.85313751668892	32	1	71.4960058097313	37	0.7297297297297297	methylated (>=50%)	O70302	Lipid transferase CIDEA (Cell death activator CIDE-A) (Cell death-inducing DFFA-like effector A)	apoptotic process [GO:0006915]; cellular response to cold [GO:0070417]; fat cell differentiation [GO:0045444]; lipid droplet fusion [GO:0160077]; lipid metabolic process [GO:0006629]; lipid storage [GO:0019915]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of cytokine production [GO:0001818]; negative regulation of execution phase of apoptosis [GO:1900118]; negative regulation of lipid catabolic process [GO:0050995]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of tumor necrosis factor production [GO:0032720]; regulation of apoptotic DNA fragmentation [GO:1902510]; response to stilbenoid [GO:0035634]; temperature homeostasis [GO:0001659]	hit with GO BP
GN002678	Chromosome_1A	32559	17	335	33.78175005374858	0.3613101575740423	75.81831476622651	332	0.9156626506024096	79.70338983050847	42	0.9761904761904762	75.37938627986021	290	0.906896551724138	70.35175879396985	24	0.7916666666666666	methylated (>=50%)	Q06846	Rabphilin-3A (Exophilin-1)	calcium-dependent activation of synaptic vesicle fusion [GO:0099502]; intracellular protein transport [GO:0006886]; positive regulation of calcium ion-dependent exocytosis [GO:0045956]	hit with GO BP
GN002679	Chromosome_1A	498	1	26	44.17670682730924	1.079	0.8465608465608465	26	0	0.8465608465608465	26	0	NA	NA	NA	0.6637806637806638	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004793	Chromosome_1A	2822	4	85	38.62508858965273	0.8185125027298537	0.6003232509812976	85	0	0.5302226935312832	42	0	0.65439672801636	43	0	0.7797878976918278	62	0	unmethylated (<10%)	Q8IWY8	Zinc finger and SCAN domain-containing protein 29 (Zinc finger protein 690)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004794	Chromosome_1A	928	2	28	39.87068965517241	0.761012183692596	0.12150668286755771	28	0	0.1594896331738437	24	0	0	4	0	0.43261231281198004	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004795	Chromosome_1A	797	2	32	42.409033877038894	0.8932474082376015	0.33003300330033003	32	0	0.3740648379052369	28	0	0	4	0	0.9541284403669725	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004796	Chromosome_1A	791	2	38	44.24778761061947	0.9819987585350713	0.6685768863419294	38	0	0.625	34	0	1.1494252873563218	4	0	0.9753298909925416	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004797	Chromosome_1A	968	3	24	41.735537190082646	0.5707547169811321	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7992477668077104	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004798	Chromosome_1A	747	1	8	41.231593038821956	0.25773062491913573	47.147147147147145	8	0.625	47.147147147147145	8	0.625	NA	NA	NA	29.90314769975787	9	0	sparse (10-50%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN002686	Chromosome_1A	240	1	4	50.416666666666664	0.2631578947368421	46.55172413793103	4	0	46.55172413793103	4	0	NA	NA	NA	37.80772220782586	25	0.04	NA	NA	NA	NA	no Swiss-Prot hit
GN004800	Chromosome_1A	929	2	33	38.751345532831	0.9568650706950904	0.38109756097560976	33	0	0.4241781548250265	26	0	0.27100271002710025	7	0	1.8953752843062925	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002656	Chromosome_1A	25237	10	318	36.910092324761266	0.37063693627422906	86.48351043329846	311	0.9581993569131833	86.76148796498906	20	0.95	86.4687807988869	291	0.9587628865979382	95.41634835752483	23	1	methylated (>=50%)	Q6P4Y1	Protein BANP	NA	hit, no GO BP
GN002657	Chromosome_1A	8804	5	287	37.73284870513403	0.9158796456892274	1.0892780862879112	286	0	1.472007722007722	150	0	0.9291052312664109	136	0	1.200781904495951	68	0	unmethylated (<10%)	Q9VPQ6	Zinc finger protein ush (Protein U-shaped)	amnioserosa maintenance [GO:0046665]; cell differentiation [GO:0030154]; chaeta development [GO:0022416]; compound eye development [GO:0048749]; germ-band shortening [GO:0007390]; heart development [GO:0007507]; larval lymph gland hemopoiesis [GO:0035167]; lymph gland crystal cell differentiation [GO:0035170]; lymph gland development [GO:0048542]; lymph gland plasmatocyte differentiation [GO:0035169]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of hemocyte differentiation [GO:0045611]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of antibacterial peptide biosynthetic process [GO:0006963]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN004802	Chromosome_1A	954	1	36	46.9601677148847	0.6953352769679301	1.593625498007968	36	0	1.593625498007968	36	0	NA	NA	NA	1.151947339550192	34	0	unmethylated (<10%)	Q9NY26	Zinc transporter ZIP1 (Solute carrier family 39 member 1) (Zinc-iron-regulated transporter-like) (Zrt- and Irt-like protein 1) (ZIP-1) (hZIP1)	monoatomic cation transport [GO:0006812]; zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN002659	Chromosome_1A	16182	14	230	35.91027067111605	0.44374376446215563	86.82252922422954	230	0.9391304347826087	80.46109510086455	30	0.8	87.65107724645297	200	0.96	1.0706638115631693	46	0	methylated (>=50%)	Q96T60	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]	base-excision repair [GO:0006284]; base-excision repair, gap-filling [GO:0006287]; DNA repair [GO:0006281]; DNA-templated DNA replication [GO:0006261]; double-strand break repair via nonhomologous end joining [GO:0006303]; nucleotide-excision repair [GO:0006289]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of telomere maintenance [GO:0032206]; regulation of DNA repair [GO:0006282]; response to oxidative stress [GO:0006979]; response to radiation [GO:0009314]; single strand break repair [GO:0000012]	hit with GO BP
GN002660	Chromosome_1A	39751	19	464	35.03559658876506	0.3804027630520816	82.03507489952503	444	0.9369369369369369	85.43624161073825	66	0.9696969696969697	81.61951619516195	378	0.9312169312169312	58.67003367003367	17	0.7058823529411765	methylated (>=50%)	O94983	Calmodulin-binding transcription activator 2	cardiac muscle hypertrophy in response to stress [GO:0014898]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004804	Chromosome_1A	342	1	13	43.85964912280702	0.8148826979472141	0.6451612903225806	13	0	0.6451612903225806	13	0	NA	NA	NA	0.7155123068116772	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004805	Chromosome_1A	318	1	11	42.76729559748428	0.7571428571428571	0.5172413793103449	11	0	0.5172413793103449	11	0	NA	NA	NA	1.362088535754824	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002663	Chromosome_1A	322	1	12	41.30434782608695	0.875	0.33003300330033003	12	0	0.33003300330033003	12	0	NA	NA	NA	0.7151819322459222	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004806	Chromosome_1A	36289	30	621	36.41048251536278	0.5174687238171097	87.01986431743863	594	0.98989898989899	94.20552286102308	87	1	86.1515317286652	507	0.9881656804733728	5.595667870036101	46	0.043478260869565216	methylated (>=50%)	Q9YHY6	Condensin complex subunit 1 (Chromosome assembly protein XCAP-D2) (Chromosome condensation-related SMC-associated protein 1) (Chromosome-associated protein D2) (Eg7) (Non-SMC condensin I complex subunit D2)	meiotic chromosome condensation [GO:0010032]; mitotic chromosome condensation [GO:0007076]	hit with GO BP
GN002667	Chromosome_1A	606	1	22	39.43894389438944	0.951741861793261	0.5563282336578581	22	0	0.5563282336578581	22	0	NA	NA	NA	0.4598405885959534	53	0	unmethylated (<10%)	P52786	Cytochrome P450 2J1 (EC 1.14.14.1) (CYPIIJ1) (Cytochrome P-450IB)	xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN002668	Chromosome_1A	576	1	24	40.104166666666664	1.069969040247678	0.5452562704471101	24	0	0.5452562704471101	24	0	NA	NA	NA	1.4735432016075016	73	0	unmethylated (<10%)	A0A2P1DP94	Cytochrome P450 monooxygenase macC (EC 1.-.-.-) (Macrophorins biosynthesis cluster protein C)	mycotoxin biosynthetic process [GO:0043386]; terpenoid biosynthetic process [GO:0016114]	hit with GO BP
GN004808	Chromosome_1A	2384	3	54	35.192953020134226	0.7315459887031334	0.8058017727639001	54	0	0.5167958656330749	17	0	0.936768149882904	37	0	0.5672609400324149	56	0	unmethylated (<10%)	P05185	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (17-alpha-hydroxyprogesterone aldolase) (EC 1.14.14.32) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17) (Steroid 17-alpha-monooxygenase)	glucocorticoid biosynthetic process [GO:0006704]; hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN004809	Chromosome_1A	570	1	21	40.70175438596491	0.9090909090909091	0.6944444444444444	21	0	0.6944444444444444	21	0	NA	NA	NA	0.6984866123399301	71	0	unmethylated (<10%)	A8NCK6	Cytochrome P450 monooxygenase COX2 (EC 1.-.-.-) (Alpha-cuprenene oxidase 2)	NA	hit, no GO BP
GN004810	Chromosome_1A	17604	7	469	37.66757555101113	0.7521066206672646	3.1668174674984524	437	0	0.8283479061205706	55	0	3.43673642834378	382	0	2.95	47	0	unmethylated (<10%)	Q29497	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (17-alpha-hydroxyprogesterone aldolase) (EC 1.14.14.32) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17) (Steroid 17-alpha-monooxygenase)	glucocorticoid biosynthetic process [GO:0006704]; hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN002670	Chromosome_1A	10701	6	321	37.949724324829454	0.8339405160057334	0.7819153054114732	277	0	0.3995641118779513	59	0	0.885478158205431	218	0	0.5679513184584178	47	0	unmethylated (<10%)	Q29497	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (17-alpha-hydroxyprogesterone aldolase) (EC 1.14.14.32) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17) (Steroid 17-alpha-monooxygenase)	glucocorticoid biosynthetic process [GO:0006704]; hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN002671	Chromosome_1A	18448	5	471	36.02558542931483	0.7869376975776488	0.8850427770675583	428	0	1.1098130841121496	43	0	0.8643831203693761	385	0	10.819480898221055	57	0	unmethylated (<10%)	Q9QUP4	Carbohydrate sulfotransferase 5 (EC 2.8.2.21) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 4) (GST4) (Intestinal N-acetylglucosamine-6-O-sulfotransferase) (I-GlcNAc6ST) (Intestinal GlcNAc-6-sulfotransferase) (mIGn6ST) (N-acetylglucosamine 6-O-sulfotransferase 3) (GlcNAc6ST-3) (Gn6st-3)	carbohydrate metabolic process [GO:0005975]; keratan sulfate proteoglycan biosynthetic process [GO:0018146]; N-acetylglucosamine metabolic process [GO:0006044]; sulfur compound metabolic process [GO:0006790]	hit with GO BP
GN002672	Chromosome_1A	6970	14	83	36.3558106169297	0.36174849378284835	74.52812202097236	83	0.8192771084337349	73.31052181351582	23	0.8695652173913043	74.87733071638861	60	0.8	0.45146726862302483	37	0	methylated (>=50%)	Q7Z569	BRCA1-associated protein (EC 2.3.2.27) (BRAP2) (Impedes mitogenic signal propagation) (IMP) (RING finger protein 52) (RING-type E3 ubiquitin transferase BRAP2) (Renal carcinoma antigen NY-REN-63)	MAPK cascade [GO:0000165]; negative regulation of signal transduction [GO:0009968]; protein ubiquitination [GO:0016567]; Ras protein signal transduction [GO:0007265]	hit with GO BP
GN002673	Chromosome_1A	32760	23	568	35.96764346764347	0.5367851876126495	88.90015906314115	563	0.9840142095914742	94.13423575860124	66	1	88.43421283860116	497	0.9818913480885312	95.92529711375212	23	1	methylated (>=50%)	Q9EST3	Eukaryotic translation initiation factor 4E transporter (4E-T) (eIF4E transporter) (CD40 ligand-activated specific transcript 4) (Eukaryotic translation initiation factor 4E nuclear import factor 1)	miRNA-mediated gene silencing by inhibition of translation [GO:0035278]; mRNA stabilization [GO:0048255]; negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0106289]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of translation [GO:0017148]; P-body assembly [GO:0033962]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; protein import into nucleus [GO:0006606]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN004811	Chromosome_1A	16601	9	200	35.305102102282994	0.38776556545543944	55.45702592087312	199	0.5276381909547738	77.04918032786885	33	0.7575757575757576	51.86406001363947	166	0.4819277108433735	89.94652406417113	13	1	methylated (>=50%)	Q3MHP5	Developmentally-regulated GTP-binding protein 1 (DRG-1) (Neural precursor cell expressed developmentally down-regulated protein 3) (NEDD-3) (Translation factor GTPase DRG1) (TRAFAC GTPase DRG1) (EC 3.6.5.-)	cytoplasmic translation [GO:0002181]; positive regulation of microtubule polymerization [GO:0031116]; regulation of mitotic spindle assembly [GO:1901673]	hit with GO BP
GN004812	Chromosome_1A	1443	1	65	43.93624393624393	0.9492652416808356	0.4070950857807502	65	0	0.4070950857807502	65	0	NA	NA	NA	1.1071312276131553	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004813	Chromosome_1A	6316	7	47	36.130462317922735	0.22974738406290632	80.19067796610169	47	0.9148936170212766	83.72093023255815	19	0.9473684210526315	78.03073420603302	28	0.8928571428571429	79.02202314296379	31	1	methylated (>=50%)	Q9NQG7	BLOC-3 complex member HPS4 (Hermansky-Pudlak syndrome 4 protein) (Light-ear protein homolog)	hemostasis [GO:0007599]; lysosome organization [GO:0007040]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; positive regulation of eye pigmentation [GO:0048075]; positive regulation of protein localization to mitochondrion [GO:1903749]; protein stabilization [GO:0050821]; protein targeting [GO:0006605]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN002654	Chromosome_1A	1933	2	44	34.609415416451114	0.7602209549688053	1.5515515515515514	44	0	1.5151515151515151	18	0	1.5723270440251573	26	0	0.5679919812896759	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002653	Chromosome_1A	879	2	27	33.10580204778157	1.121173469387755	0.6282722513089005	27	0	0.7299270072992701	23	0	0.24813895781637718	4	0	0.9388038942976356	53	0	unmethylated (<10%)	Q90963	Paired mesoderm homeobox protein 2 (PRX-2)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN002652	Chromosome_1A	1767	1	14	41.82229767968308	0.18307628548592403	71.21951219512195	14	0.8571428571428571	71.21951219512195	14	0.8571428571428571	NA	NA	NA	66.41929499072356	13	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004815	Chromosome_1A	39811	35	474	35.33947903845671	0.3832283848092332	84.1843811489952	464	0.9568965517241379	86.48413733159497	127	0.9921259842519685	83.52560378454643	337	0.9436201780415431	48.1421647819063	10	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004816	Chromosome_1A	701	2	3	46.3623395149786	0.09197061138808711	97.84946236559139	3	1	97.84946236559139	3	1	NA	NA	NA	93.53932584269663	30	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004817	Chromosome_1A	5794	7	74	36.41698308595098	0.3883659420289855	90.82412914188615	74	0.9864864864864865	96.89839572192513	20	1	89.31884442088524	54	0.9814814814814815	88.10656517602284	19	1	methylated (>=50%)	Q14839	ATP-dependent chromatin remodeler CHD4 (EC 3.6.4.-) (Chromo domain-containing protein 4) (CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta)	chromatin remodeling [GO:0006338]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of cell fate specification [GO:0042659]; regulation of stem cell differentiation [GO:2000736]; regulation of synapse assembly [GO:0051963]; terminal button organization [GO:0072553]	hit with GO BP
GN004818	Chromosome_1A	2441	6	13	31.257681278164686	0.21925654667311545	86.7248062015504	13	1	92.15686274509804	5	1	84.43526170798899	8	1	30.552546045503792	26	0.2692307692307692	methylated (>=50%)	A1A5V9	Elongator complex protein 5 (Dermal papilla-derived protein 6 homolog) (Retinoic acid-induced protein 12)	positive regulation of cell migration [GO:0030335]; tRNA modification [GO:0006400]; tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN004819	Chromosome_1A	2455	4	17	35.926680244399186	0.21716958845231218	88.23529411764706	17	1	86.10526315789474	10	1	90.81632653061224	7	1	77.77777777777777	7	1	methylated (>=50%)	Q9CR24	Mitochondrial coenzyme A diphosphatase NUDT8 (EC 3.6.1.-) (EC 3.6.1.77) (Nucleoside diphosphate-linked moiety X motif 8) (Nudix motif 8)	acetyl-CoA catabolic process [GO:0046356]; butyryl-CoA catabolic process [GO:0044580]; coenzyme A catabolic process [GO:0015938]; malonyl-CoA catabolic process [GO:2001294]; medium-chain fatty-acyl-CoA catabolic process [GO:0036114]; propionyl-CoA catabolic process [GO:1902859]; succinyl-CoA catabolic process [GO:1901289]	hit with GO BP
GN002610	Chromosome_1A	237	1	13	41.35021097046413	1.3183568677792041	0.7092198581560284	13	0	0.7092198581560284	13	0	NA	NA	NA	0.4752851711026616	105	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002645	Chromosome_1A	3330	2	80	35.7957957957958	0.7500696855282163	0.6269592476489029	80	0	0.6779661016949152	23	0	0.6153846153846154	57	0	0.34843205574912894	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004820	Chromosome_1A	7235	5	92	33.80787836903939	0.4454438075735218	75.19417475728156	80	0.725	68.30601092896175	12	0.75	76.68240850059031	68	0.7205882352941176	14.016990291262136	27	0.14814814814814814	methylated (>=50%)	Q08C33	Isochorismatase domain-containing protein 1	NA	hit, no GO BP
GN004821	Chromosome_1A	2751	1	29	37.6226826608506	0.30666538535460314	93.95393474088291	29	1	93.95393474088291	29	1	NA	NA	NA	94.57403651115618	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004822	Chromosome_1A	13104	11	111	34.62301587301587	0.28375422106994247	84.44909344490935	111	0.9369369369369369	89.74145120934112	25	1	83.05047388141944	86	0.9186046511627907	63.92079207920792	35	0.6857142857142857	methylated (>=50%)	P37287	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol-glycan biosynthesis class A protein) (PIG-A)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN004823	Chromosome_1A	1107	4	34	37.75971093044264	0.8621495327102804	0.5851375073142189	34	0	0.6529850746268657	22	0	0.47095761381475665	12	0	3.903345724907063	16	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN002642	Chromosome_1A	7034	9	159	34.46118851293716	0.7615353188707766	22.680890538033395	153	0.23529411764705882	14.654377880184331	45	0.15555555555555556	26.733364355514194	108	0.26851851851851855	1.825633383010432	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004824	Chromosome_1A	1080	1	42	38.7962962962963	1.0337754683440448	0.2775850104094379	42	0	0.2775850104094379	42	0	NA	NA	NA	0.6648416112631991	58	0	unmethylated (<10%)	Q63931	Cholecystokinin receptor type A (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R)	NA	hit, no GO BP
GN003068	Chromosome_1A	2475	5	44	35.39393939393939	0.5690844481605352	13.601683767429623	42	0	28.91156462585034	5	0	10.799875505757859	37	0	1.3778705636743216	78	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003069	Chromosome_1A	4239	6	47	34.63080915310215	0.3705509172033991	7.713625866050808	47	0	11.203319502074688	12	0	6.714200831847891	35	0	0.5268703898840885	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002616	Chromosome_1A	372	1	13	43.01075268817204	0.7653109669251463	1.5037593984962405	11	0	1.5037593984962405	11	0	NA	NA	NA	0.6073752711496746	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004825	Chromosome_1A	354	1	7	41.80790960451977	0.45384615384615384	0	6	0	0	6	0	NA	NA	NA	2.582439411998411	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011064	Chromosome_1A	405	2	5	40.98765432098765	0.2950174825174825	7.142857142857143	4	0	9.090909090909092	3	0	0	1	0	2.857142857142857	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002617	Chromosome_1A	273	1	9	54.57875457875458	0.45550611790878753	0.29069767441860467	9	0	0.29069767441860467	9	0	NA	NA	NA	0.5835667600373483	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004826	Chromosome_1A	372	1	13	43.27956989247312	0.7546816479400749	0	7	0	0	7	0	NA	NA	NA	0.1984126984126984	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017241	Chromosome_1A	1104	1	40	39.31159420289855	0.9379779099405268	0.615595075239398	40	0	0.615595075239398	40	0	NA	NA	NA	0.6520557869951096	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004827	Chromosome_1A	471	1	0	42.88747346072187	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004828	Chromosome_1A	444	1	30	52.47747747747748	0.9823008849557522	40.36259541984733	30	0.5	40.36259541984733	30	0.5	NA	NA	NA	6.959008579599619	24	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004829	Chromosome_1A	468	1	13	43.376068376068375	0.5909090909090909	0.6172839506172839	13	0	0.6172839506172839	13	0	NA	NA	NA	0.7387247278382582	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004830	Chromosome_1A	288	1	15	47.56944444444444	0.9230769230769231	0.5628517823639775	15	0	0.5628517823639775	15	0	NA	NA	NA	0.5967604433077579	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002624	Chromosome_1A	660	1	22	43.63636363636363	0.712638036809816	0.2347417840375587	22	0	0.2347417840375587	22	0	NA	NA	NA	0.5859375	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002625	Chromosome_1A	405	1	25	47.65432098765432	1.0873067010309279	0.646551724137931	25	0	0.646551724137931	25	0	NA	NA	NA	0.656624179219776	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004832	Chromosome_1A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004833	Chromosome_1A	894	1	24	38.81431767337808	0.7228623408126137	1.068566340160285	24	0	1.068566340160285	24	0	NA	NA	NA	1.3986013986013985	44	0	unmethylated (<10%)	Q9Y2C3	Beta-1,3-galactosyltransferase 5 (Beta-1,3-GalTase 5) (Beta3Gal-T5) (Beta3GalT5) (b3Gal-T5) (EC 2.4.1.-) (Beta-3-Gx-T5) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5)	glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN002626	Chromosome_1A	782	1	17	37.59590792838875	0.6280234315948602	0.6024096385542169	17	0	0.6024096385542169	17	0	NA	NA	NA	0.8522727272727273	43	0	unmethylated (<10%)	Q9Y2C3	Beta-1,3-galactosyltransferase 5 (Beta-1,3-GalTase 5) (Beta3Gal-T5) (Beta3GalT5) (b3Gal-T5) (EC 2.4.1.-) (Beta-3-Gx-T5) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5)	glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN004834	Chromosome_1A	645	1	30	44.031007751937985	0.967741935483871	0.08361204013377926	30	0	0.08361204013377926	30	0	NA	NA	NA	0.6437768240343348	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004835	Chromosome_1A	7127	3	88	33.983443244001684	0.4281775065761761	91.67664670658682	87	0.9885057471264368	88.17891373801918	5	1	91.8485943144338	82	0.9878048780487805	93.82911392405063	19	1	methylated (>=50%)	P62869	Elongin-B (EloB) (Elongin 18 kDa subunit) (RNA polymerase II transcription factor SIII subunit B) (SIII p18) (Transcription elongation factor B polypeptide 2)	positive regulation of transcription by RNA polymerase II [GO:0045944]; protein ubiquitination [GO:0016567]; target-directed miRNA degradation [GO:0140958]; transcription elongation by RNA polymerase II [GO:0006368]; transcription initiation at RNA polymerase II promoter [GO:0006367]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN004836	Chromosome_1A	7289	8	62	35.51927562079846	0.2696987419732162	80.76261467889908	62	0.9354838709677419	83.13120176405734	37	0.9459459459459459	78.19593787335722	25	0.92	69.61325966850829	12	0.8333333333333334	methylated (>=50%)	Q9WVS8	Mitogen-activated protein kinase 7 (MAP kinase 7) (MAPK 7) (EC 2.7.11.24) (Big MAP kinase 1) (BMK-1) (Extracellular signal-regulated kinase 5) (ERK-5)	cellular response to growth factor stimulus [GO:0071363]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to laminar fluid shear stress [GO:0071499]; cellular response to transforming growth factor beta stimulus [GO:0071560]; ERK5 cascade [GO:0070375]; intracellular signal transduction [GO:0035556]; MAPK cascade [GO:0000165]; negative regulation of apoptotic process [GO:0043066]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of endothelial cell apoptotic process [GO:2000352]; negative regulation of ERK5 cascade [GO:0070377]; negative regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001240]; negative regulation of heterotypic cell-cell adhesion [GO:0034115]; negative regulation of MAP kinase activity [GO:0043407]; negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [GO:1902176]; negative regulation of response to cytokine stimulus [GO:0060761]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of protein metabolic process [GO:0051247]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of angiogenesis [GO:0045765]	hit with GO BP
GN004837	Chromosome_1A	150	1	10	60	1.20870265914585	1.0452961672473868	10	0	1.0452961672473868	10	0	NA	NA	NA	1.1787819253438114	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002689	Chromosome_1A	4339	5	117	35.56118921410463	0.8531721089692956	0.6804925469863902	117	0	0.8201202843083653	48	0	0.6216900759843427	69	0	1.042654028436019	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004838	Chromosome_1A	654	1	31	45.718654434250766	0.9079265562024182	0.3937007874015748	31	0	0.3937007874015748	31	0	NA	NA	NA	0.5062537224538416	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004839	Chromosome_1A	588	1	22	47.27891156462585	0.7045751633986929	0.9523809523809523	5	0	0.9523809523809523	5	0	NA	NA	NA	1.2057272042200453	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002690	Chromosome_1A	1138	3	25	36.203866432337435	0.6706742102781706	0.9630818619582665	25	0	1.0248901903367496	15	0	0.8880994671403197	10	0	0.5286141116984602	74	0	unmethylated (<10%)	Q93243	Zinc metalloproteinase nas-37 (EC 3.4.24.-) (Nematode astacin 37)	collagen and cuticulin-based cuticle development [GO:0040002]; ecdysis, collagen and cuticulin-based cuticle [GO:0042395]; molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN004840	Chromosome_1A	3963	3	53	34.266969467575066	0.4555844279789689	70.76591154261057	53	0.8867924528301887	67.24738675958189	8	0.875	71.06109324758843	45	0.8888888888888888	70.4968944099379	19	0.8421052631578947	methylated (>=50%)	Q9H0C1	Zinc finger MYND domain-containing protein 12	flagellated sperm motility [GO:0030317]; sperm axoneme assembly [GO:0007288]; sperm capacitation [GO:0048240]	hit with GO BP
GN004841	Chromosome_1A	1157	2	28	39.152981849611066	0.6348422496570645	89.3909626719057	28	1	89.3909626719057	28	1	NA	NA	NA	80.73938840712003	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004842	Chromosome_1A	243	1	7	44.8559670781893	0.5837336993822924	50	1	1	50	1	1	NA	NA	NA	77.88461538461539	5	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004843	Chromosome_1A	544	2	6	38.786764705882355	0.293314162473041	87.93103448275862	3	1	87.93103448275862	3	1	NA	NA	NA	85.2895752895753	62	0.9838709677419355	NA	NA	NA	NA	no Swiss-Prot hit
GN004844	Chromosome_1A	11568	5	230	36.21196403872752	0.6067306271447102	84.30375962329023	228	0.9473684210526315	87.95180722891567	5	1	84.23457730388424	223	0.9461883408071748	86.77196446199407	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002594	Chromosome_1A	2838	2	28	38.125440451021845	0.2783756515890365	88	2	1	86.66666666666667	1	1	90	1	1	83.95522388059702	21	0.9523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN002595	Chromosome_1A	496	2	7	35.483870967741936	0.4636752136752137	87.71084337349397	7	1	87.71084337349397	7	1	NA	NA	NA	58.51162790697674	27	0.5185185185185185	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002596	Chromosome_1A	445	2	14	40.89887640449438	0.7556094602789569	92.07920792079207	7	1	93.02325581395348	6	1	86.66666666666667	1	1	81.63090128755364	41	0.9512195121951219	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002602	Chromosome_1A	433	2	7	39.722863741339495	0.4154331140350877	89.48545861297539	7	1	87.03703703703704	4	1	91.77489177489177	3	1	96.02612955906369	29	1	methylated (>=50%)	Q8K4P0	pre-mRNA 3' end processing protein WDR33 (WD repeat-containing protein 33) (WD repeat-containing protein of 146 kDa)	mRNA 3'-end processing [GO:0031124]	hit with GO BP
GN002603	Chromosome_1A	1558	3	27	37.09884467265725	0.5071553439025861	52.01946472019465	24	0.5	50.85197018104366	22	0.45454545454545453	64.40677966101696	2	1	69.43419434194342	21	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004847	Chromosome_1A	14965	35	178	35.39592382225192	0.3827755115178819	90.4986721746828	178	0.9943820224719101	94.55634186173108	67	1	88.2026798090251	111	0.990990990990991	88.17267888823181	25	0.96	methylated (>=50%)	Q17N71	Clustered mitochondria protein homolog	intracellular distribution of mitochondria [GO:0048312]; mitochondrion organization [GO:0007005]	hit with GO BP
GN002592	Chromosome_1A	2308	4	17	34.835355285961874	0.2427970297029703	78.34645669291339	17	0.8235294117647058	75.37993920972644	5	0.8	79.76710334788937	12	0.8333333333333334	86.39858072146659	27	1	methylated (>=50%)	O00170	AH receptor-interacting protein (AIP) (Aryl-hydrocarbon receptor-interacting protein) (HBV X-associated protein 2) (XAP-2) (Immunophilin homolog ARA9)	protein localization to mitochondrion [GO:0070585]; protein maturation [GO:0051604]	hit with GO BP
GN004848	Chromosome_1A	15540	10	402	35.77863577863578	0.8086676881785223	1.9730257827765334	400	0	0.5108556832694764	63	0	2.157346785445959	337	0	33.19179051663128	43	0.16279069767441862	unmethylated (<10%)	P09487	Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme) (Phosphoamidase) (Phosphocreatine phosphatase) (EC 3.9.1.1)	biomineral tissue development [GO:0031214]; bone mineralization [GO:0030282]; positive regulation of cold-induced thermogenesis [GO:0120162]	hit with GO BP
GN004849	Chromosome_1A	26384	23	366	35.58217101273499	0.43856000558069774	88.93538341767224	344	0.9767441860465116	91.44667370644139	38	0.9736842105263158	88.68045878443563	306	0.9771241830065359	0.7653812187224022	53	0	methylated (>=50%)	P49916	DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3)	base-excision repair [GO:0006284]; base-excision repair, gap-filling [GO:0006287]; DNA biosynthetic process [GO:0071897]; double-strand break repair [GO:0006302]; double-strand break repair via alternative nonhomologous end joining [GO:0097681]; double-strand break repair via homologous recombination [GO:0000724]; lagging strand elongation [GO:0006273]; mitochondrial DNA repair [GO:0043504]; mitochondrion organization [GO:0007005]; negative regulation of mitochondrial DNA replication [GO:0090298]; regulation of DNA repair [GO:0006282]	hit with GO BP
GN002586	Chromosome_1A	714	1	17	46.21848739495798	0.46326476088698904	97.96195652173913	17	1	97.96195652173913	17	1	NA	NA	NA	89.91935483870968	3	1	methylated (>=50%)	A1Z6E0	Protein gustavus	cuticle pattern formation [GO:0035017]; dorsal appendage formation [GO:0046843]; germ cell development [GO:0007281]; germ cell migration [GO:0008354]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; oocyte anterior/posterior axis specification [GO:0007314]; pole plasm assembly [GO:0007315]; positive regulation of protein catabolic process [GO:0045732]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; wing disc morphogenesis [GO:0007472]	hit with GO BP
GN002578	Chromosome_1A	24216	28	305	35.158572844400396	0.41038503253796094	82.49221819666275	305	0.940983606557377	78.68675995694295	50	0.9	83.12314098750744	255	0.9490196078431372	89.81173864894795	17	1	methylated (>=50%)	Q92002	Unconventional myosin-Ic (Myosin I beta) (MMI-beta) (MMIb) (aMIb)	actin filament organization [GO:0007015]; actin filament-based movement [GO:0030048]; endocytosis [GO:0006897]	hit with GO BP
GN004851	Chromosome_1A	1380	1	10	42.17391304347826	0.1629722356720243	71.54929577464789	10	0.9	71.54929577464789	10	0.9	NA	NA	NA	67.45886654478976	9	0.7777777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004852	Chromosome_1A	31062	26	384	35.364754362243254	0.40083615067971856	77.18408895793304	382	0.9240837696335078	79.71295577967416	53	0.9245283018867925	76.886167344514	329	0.9240121580547113	86.53566229985444	28	1	methylated (>=50%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN004853	Chromosome_1A	2563	4	58	37.65119001170503	0.6385865129346266	0.7104795737122558	58	0	0.8620689655172413	31	0	0.5794701986754967	27	0	0.7839721254355401	49	0	unmethylated (<10%)	Q90VV1	Transcription factor HES-4-B (Hairy and enhancer of split 4-B) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2b)	anterior/posterior pattern specification [GO:0009952]; floor plate development [GO:0033504]; lens development in camera-type eye [GO:0002088]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of skeletal muscle tissue development [GO:0048642]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural crest formation [GO:0014029]; prechordal plate formation [GO:0021501]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN002576	Chromosome_1A	34008	37	920	36.400258762644086	0.8170431884890446	1.0390846040211321	898	0	0.5963972736124635	215	0	1.1537370362197774	683	0	0.37614185921547555	53	0	unmethylated (<10%)	Q00685	Complement C3 [Cleaved into: Complement C3 beta chain; Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b (Complement C3b-alpha' chain)]	complement activation, alternative pathway [GO:0006957]; complement activation, classical pathway [GO:0006958]; complement activation, GZMK pathway [GO:0160257]; complement activation, lectin pathway [GO:0001867]; opsonization [GO:0008228]	hit with GO BP
GN002575	Chromosome_1A	1792	4	42	51.060267857142854	0.3638473140735584	0.6116207951070336	31	0	0.5154639175257731	30	0	1.3888888888888888	1	0	0.6511627906976745	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002574	Chromosome_1A	243	1	13	49.382716049382715	0.8796992481203008	0.7299270072992701	13	0	0.7299270072992701	13	0	NA	NA	NA	0.4742145820983995	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002573	Chromosome_1A	498	1	14	45.78313253012048	0.5375067458175931	34.30962343096234	12	0.16666666666666666	34.30962343096234	12	0.16666666666666666	NA	NA	NA	0	16	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004856	Chromosome_1A	498	1	14	45.58232931726908	0.5420618877313015	0.23148148148148148	12	0	0.23148148148148148	12	0	NA	NA	NA	1.256281407035176	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004857	Chromosome_1A	33810	11	434	33.768115942028984	0.4536377515111273	85.6119910188725	432	0.9652777777777778	85.11278195488721	36	0.9444444444444444	85.64415592804315	396	0.9671717171717171	95.04347826086956	32	1	methylated (>=50%)	Q32NG0	Adenosine deaminase domain-containing protein 1	adenosine to inosine editing [GO:0006382]; RNA processing [GO:0006396]; spermatid development [GO:0007286]	hit with GO BP
GN002570	Chromosome_1A	964	2	28	36.20331950207469	0.8954352441613588	0.5461165048543689	28	0	0.6258692628650904	25	0	0	3	0	0.4331087584215592	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002569	Chromosome_1A	2208	2	64	36.594202898550726	0.8693983019564415	0.38461538461538464	64	0	0.3784295175023652	57	0	0.42643923240938164	7	0	0.48173424327579284	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004859	Chromosome_1A	339	1	8	39.233038348082594	0.648493543758967	0	8	0	0	8	0	NA	NA	NA	0.1866368047779022	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004858	Chromosome_1A	2205	2	60	36.19047619047619	0.8333333333333334	0.3510825043885313	60	0	0.32765399737876805	54	0	0.546448087431694	6	0	0.5408653846153846	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002565	Chromosome_1A	252	1	13	51.98412698412698	0.7766714082503556	0.7194244604316546	13	0	0.7194244604316546	13	0	NA	NA	NA	0.6257822277847309	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004861	Chromosome_1A	5596	13	152	35.7398141529664	0.85125938735969	0.5871725383920506	146	0	0.6408544726301736	94	0	0.5177770107007249	52	0	0.47238372093023256	43	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN004862	Chromosome_1A	1176	1	59	44.89795918367347	0.9983309352517986	0.7311586051743532	59	0	0.7311586051743532	59	0	NA	NA	NA	0.5265137269650244	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002559	Chromosome_1A	57854	51	701	35.02264320530992	0.397360592343148	91.04007104007104	693	0.9927849927849928	94.90202878446333	108	1	90.47303834207445	585	0.9914529914529915	87.6923076923077	20	1	methylated (>=50%)	Q587J7	Putative ATP-dependent RNA helicase TDRD12 (EC 3.6.4.13) (ES cell-associated transcript 8 protein) (Tudor domain-containing protein 12)	fertilization [GO:0009566]; germ-line stem cell division [GO:0042078]; male meiotic nuclear division [GO:0007140]; piRNA processing [GO:0034587]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN004864	Chromosome_1A	2290	4	25	35.89519650655022	0.34085496546796856	93.46938775510205	25	1	94.1972920696325	8	1	92.93785310734464	17	1	17.927461139896373	33	0.24242424242424243	methylated (>=50%)	Q99547	M-phase phosphoprotein 6	maturation of 5.8S rRNA [GO:0000460]	hit with GO BP
GN002558	Chromosome_1A	4169	4	98	35.97985128328136	0.7272063849176966	55.77717248044987	78	0.6923076923076923	59.432933478735	33	0.8484848484848485	53.31077104178929	45	0.5777777777777777	67.68301250526908	56	0.9642857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004865	Chromosome_1A	729	1	19	47.59945130315501	0.46216216216216216	1.3824884792626728	16	0	1.3824884792626728	16	0	NA	NA	NA	0.7226236798221234	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001131	Chromosome_1A	375	1	9	45.86666666666667	0.4772341628959276	0.7556675062972292	9	0	0.7556675062972292	9	0	NA	NA	NA	0.830367734282325	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004866	Chromosome_1A	31611	22	545	36.031761095821075	0.5312400245996148	78.65049571662335	357	0.8711484593837535	89.31691818903892	52	0.9615384615384616	77.17962760131435	305	0.8557377049180328	79.6812749003984	18	0.8888888888888888	methylated (>=50%)	P21894	Alanine--tRNA ligase, cytoplasmic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)	alanyl-tRNA aminoacylation [GO:0006419]	hit with GO BP
GN002551	Chromosome_1A	6186	1	77	42.98415777562237	0.27046999301568914	80.15	77	0.974025974025974	80.15	77	0.974025974025974	NA	NA	NA	61.60220994475138	31	0.8064516129032258	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002552	Chromosome_1A	564	1	8	42.730496453900706	0.31078660972585753	87.61261261261261	8	1	87.61261261261261	8	1	NA	NA	NA	83.08370044052863	24	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004868	Chromosome_1A	5281	4	91	36.48930126869911	0.5179537973714899	64.25604690935744	91	0.7692307692307693	49.48979591836735	18	0.7222222222222222	67.75460864309458	73	0.7808219178082192	47.862886161658906	42	0.5952380952380952	methylated (>=50%)	P0DW91	Zinc finger TRAF-type-containing protein 1 (Cysteine and histidine-rich protein 1)	NA	hit, no GO BP
GN004869	Chromosome_1A	1017	1	17	39.13470993117011	0.4368556701030928	93.33333333333333	17	1	93.33333333333333	17	1	NA	NA	NA	89.05579399141631	13	1	methylated (>=50%)	Q866D2	Galactoside alpha-(1,2)-fucosyltransferase 1 (Alpha(1,2)FT 1) (Fucosyltransferase 1) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT1) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT1) (EC 2.4.1.344)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; olfactory bulb development [GO:0021772]; positive regulation of cell-matrix adhesion [GO:0001954]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell-matrix adhesion [GO:1904906]; positive regulation of sprouting angiogenesis [GO:1903672]	hit with GO BP
GN004870	Chromosome_1A	1343	4	41	36.33655994043187	0.9256308100929614	3.5137701804368473	41	0	2.2151898734177213	10	0	4.07055630936228	31	0	1.544874938695439	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004871	Chromosome_1A	2043	1	103	43.31864904552129	1.0747469278936024	8.748573602130087	103	0	8.748573602130087	103	0	NA	NA	NA	12.733812949640289	58	0	unmethylated (<10%)	W6YKT9	Polyglycine hydrolase (EC 3.4.21.-) (Chitinase modifying protein) (BzCMP)	effector-mediated suppression of host defense response [GO:0140590]	hit with GO BP
GN002550	Chromosome_1A	11255	12	110	33.94935584184807	0.33921036769138035	80.38504464285714	104	0.8846153846153846	73.30097087378641	26	0.7307692307692307	82.5	78	0.9358974358974359	26.72	19	0.21052631578947367	methylated (>=50%)	Q9BQ70	Ribosome quality control complex subunit TCF25 (Nuclear localized protein 1) (Transcription factor 25) (TCF-25)	regulation of protein K48-linked ubiquitination [GO:0061945]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN002549	Chromosome_1A	4247	3	60	34.306569343065696	0.4857878181298256	89.65997770345597	60	1	91.35446685878962	18	1	88.9674126423243	42	1	86.66424418604652	28	1	methylated (>=50%)	Q8N0V3	Putative ribosome-binding factor A, mitochondrial	mitochondrial small ribosomal subunit assembly [GO:0180026]; rRNA processing [GO:0006364]	hit with GO BP
GN002548	Chromosome_1A	15096	16	224	34.19448860625331	0.508246158285838	86.19033323326329	224	0.9642857142857143	86.09271523178808	27	0.9629629629629629	86.20114712551687	197	0.9644670050761421	75.47779273216689	43	0.813953488372093	methylated (>=50%)	Q9BQI3	Eukaryotic translation initiation factor 2-alpha kinase 1 (EC 2.7.11.1) (Heme-controlled repressor) (HCR) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Heme-regulated inhibitor) (hHRI) (Hemin-sensitive initiation factor 2-alpha kinase)	HRI-mediated signaling [GO:0140468]; integrated stress response signaling [GO:0140467]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of hemoglobin biosynthetic process [GO:0046986]; negative regulation of translational initiation by iron [GO:0045993]; positive regulation of mitophagy [GO:1901526]; protein autophosphorylation [GO:0046777]; protein localization to mitochondrion [GO:0070585]; regulation of translational initiation [GO:0006446]; response to iron ion starvation [GO:1990641]	hit with GO BP
GN004873	Chromosome_1A	486	1	30	49.17695473251029	1.023157894736842	0.2962962962962963	30	0	0.2962962962962963	30	0	NA	NA	NA	0.35762181493071077	63	0	unmethylated (<10%)	Q641F3	Collagen alpha-1(XXI) chain	NA	hit, no GO BP
GN004874	Chromosome_1A	267	1	5	50.18726591760299	0.31308630393996245	75.8974358974359	5	0.8	75.8974358974359	5	0.8	NA	NA	NA	75.46583850931677	35	0.9428571428571428	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004875	Chromosome_1A	4892	5	82	35.48650858544563	0.5331079401910792	79.33381959640165	82	0.9634146341463414	75.91397849462365	10	0.9	79.76973684210526	72	0.9722222222222222	83.17358892438764	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004876	Chromosome_1A	324	1	7	45.06172839506173	0.45	0.3831417624521073	7	0	0.3831417624521073	7	0	NA	NA	NA	0.6941001487357461	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004877	Chromosome_1A	1157	2	37	50.561797752808985	0.5227239425612973	NA	0	NA	NA	NA	NA	NA	NA	NA	0.591715976331361	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002546	Chromosome_1A	4761	3	0	27.872295736189876	0	NA	0	NA	NA	NA	NA	NA	NA	NA	3.3333333333333335	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002547	Chromosome_1A	1353	1	48	42.572062084257205	0.7934029686641012	1.6117216117216118	48	0	1.6117216117216118	48	0	NA	NA	NA	0.7881773399014779	43	0	unmethylated (<10%)	Q9VVY3	Glycogen-binding subunit 76A (CBM21 domain-containing protein CG9619)	negative regulation of glycogen catabolic process [GO:0045818]; positive regulation of glycogen biosynthetic process [GO:0045725]; regulation of glycogen biosynthetic process [GO:0005979]	hit with GO BP
GN004879	Chromosome_1A	297	1	6	42.76094276094276	0.4441674975074776	0.6134969325153374	6	0	0.6134969325153374	6	0	NA	NA	NA	0.8810572687224669	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004880	Chromosome_1A	4048	2	34	37.69762845849802	0.23735179740111922	88.85746606334841	34	0.9705882352941176	95.47038327526133	7	1	87.575962187711	27	0.9629629629629629	93.67755532139094	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004881	Chromosome_1A	876	1	5	39.15525114155251	0.15446466356326705	97.0909090909091	5	1	97.0909090909091	5	1	NA	NA	NA	75.91201716738198	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004882	Chromosome_1A	1076	3	12	32.62081784386617	0.41979322452695234	46.15384615384615	12	0.6666666666666666	46.15384615384615	12	0.6666666666666666	NA	NA	NA	1.4118457300275482	94	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004883	Chromosome_1A	29384	38	350	35.696297304655594	0.37533246323625746	90.07326661901358	350	0.9742857142857143	93.94614294391577	103	0.970873786407767	88.97678417884781	247	0.9757085020242915	3.9583333333333335	23	0.043478260869565216	methylated (>=50%)	Q8CJF7	Protein ELYS (Embryonic large molecule derived from yolk sac) (Protein MEL-28) (Putative AT-hook-containing transcription factor 1)	hemopoiesis [GO:0030097]; nuclear pore complex assembly [GO:0051292]; nucleocytoplasmic transport [GO:0006913]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN004884	Chromosome_1A	504	1	0	39.48412698412698	0	NA	0	NA	NA	NA	NA	NA	NA	NA	52.197070572569906	15	0.6666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN004885	Chromosome_1A	14109	15	130	34.77213126373237	0.30558906245834777	54.64372066562367	130	0.5076923076923077	77.487922705314	50	0.76	45.11187260632937	80	0.35	13.895216400911162	8	0	methylated (>=50%)	Q8N556	Actin filament-associated protein 1 (110 kDa actin filament-associated protein) (AFAP-110)	regulation of signal transduction [GO:0009966]	hit with GO BP
GN002542	Chromosome_1A	16710	17	158	37.91741472172352	0.2654775958218284	88.56505185768675	148	0.8986486486486487	90.65137416143692	81	0.9753086419753086	85.34712950600802	67	0.8059701492537313	71.87096774193549	13	0.7692307692307693	methylated (>=50%)	Q86VM9	Zinc finger CCCH domain-containing protein 18 (Nuclear protein NHN1)	RNA destabilization [GO:0050779]	hit with GO BP
GN004886	Chromosome_1A	2395	4	47	32.31732776617954	0.7536034920231105	77.21635277905375	47	0.7659574468085106	3.2710280373831777	4	0	81.03864734299516	43	0.8372093023255814	39.422047805922226	49	0.4489795918367347	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004887	Chromosome_1A	771	1	23	41.37483787289235	0.7425879396984925	84.3956043956044	23	0.9565217391304348	84.3956043956044	23	0.9565217391304348	NA	NA	NA	82.47191011235955	18	0.9444444444444444	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004888	Chromosome_1A	547	3	10	34.73491773308958	0.6438323917137476	89.29001203369434	10	0.9	95.6882255389718	7	1	72.36842105263158	3	0.6666666666666666	86.73611111111111	25	0.92	methylated (>=50%)	Q9CWL8	Beta-catenin-like protein 1 (Nuclear-associated protein) (NAP)	apoptotic process [GO:0006915]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of apoptotic process [GO:0043065]; somatic diversification of immunoglobulins [GO:0016445]	hit with GO BP
GN002545	Chromosome_1A	6256	3	75	36.54092071611253	0.3594980818340838	74.03149212696826	74	0.7567567567567568	60.294117647058826	4	0.75	74.76955491177245	70	0.7571428571428571	57.10707576706324	57	0.631578947368421	methylated (>=50%)	P0C6T1	Chromosome transmission fidelity protein 8 homolog	mitotic sister chromatid cohesion [GO:0007064]; positive regulation of DNA-directed DNA polymerase activity [GO:1900264]	hit with GO BP
GN004889	Chromosome_1A	1101	1	22	38.782924613987284	0.5342066957787481	91.12519809825673	22	1	91.12519809825673	22	1	NA	NA	NA	80.20171834142697	35	0.9428571428571428	methylated (>=50%)	A8E534	Lysine-specific demethylase 8 (EC 1.14.11.27) (JmjC domain-containing protein 5) (Jumonji domain-containing protein 5)	circadian regulation of gene expression [GO:0032922]; G2/M transition of mitotic cell cycle [GO:0000086]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; protein destabilization [GO:0031648]	hit with GO BP
GN004890	Chromosome_1A	45435	7	768	34.96863651370089	0.5536022297613744	83.83323506476216	731	0.9124487004103967	39.856801909307876	23	0.30434782608695654	84.54550725758132	708	0.9322033898305084	0.6557377049180327	51	0	methylated (>=50%)	Q8IY22	C-Maf-inducing protein (c-Mip) (Truncated c-Maf-inducing protein) (Tc-Mip)	NA	hit, no GO BP
GN004891	Chromosome_1A	585	1	18	40.17094017094017	0.7891187050359713	0.6793478260869565	18	0	0.6793478260869565	18	0	NA	NA	NA	0.6566604127579737	63	0	unmethylated (<10%)	Q9H0A9	Speriolin-like protein (Spermatogenesis and centriole-associated protein 1-like protein)	spermatogenesis [GO:0007283]	hit with GO BP
GN002536	Chromosome_1A	492	1	14	39.83739837398374	0.7198996655518395	0.6993006993006993	14	0	0.6993006993006993	14	0	NA	NA	NA	0.5133846718005134	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004892	Chromosome_1A	504	1	10	42.26190476190476	0.45056320400500627	0.5524861878453039	10	0	0.5524861878453039	10	0	NA	NA	NA	0.5608131791097091	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018820	Chromosome_1A	916	2	8	34.49781659388646	0.30047564375922586	49.68454258675079	8	0.625	50.173611111111114	7	0.7142857142857143	44.827586206896555	1	0	5.205205205205205	52	0.019230769230769232	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002534	Chromosome_1A	1170	1	24	40.94017094017094	0.4896421845574388	3.225806451612903	5	0	3.225806451612903	5	0	NA	NA	NA	13.168724279835391	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004893	Chromosome_1A	30278	4	306	32.08930576656318	0.3933916797060297	78.70089908168661	296	0.8952702702702703	77.1513353115727	7	1	78.72641970481868	289	0.8927335640138409	94.74548440065682	53	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004894	Chromosome_1A	5949	1	200	46.427971087577745	0.6381978982058797	0.37758830694275275	199	0	0.37758830694275275	199	0	NA	NA	NA	7.332293291731669	38	0.02631578947368421	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004895	Chromosome_1A	24352	14	459	36.56783837056505	0.5656667975372047	42.874957000344	427	0.39344262295081966	84.8349687778769	22	1	40.749943528348766	405	0.36049382716049383	94.68887492143305	47	1	sparse (10-50%)	Q8NDN9	RCC1 and BTB domain-containing protein 1 (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) (Regulator of chromosome condensation and BTB domain-containing protein 1)	NA	hit, no GO BP
GN004896	Chromosome_1A	1117	2	36	44.04655326768129	0.6655852754237288	89.20454545454545	14	1	89.18032786885246	12	1	89.36170212765957	2	1	79.88394584139265	24	0.9583333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004897	Chromosome_1A	390	1	11	41.282051282051285	0.6632653061224489	80.31496062992126	6	1	80.31496062992126	6	1	NA	NA	NA	76.58227848101266	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004898	Chromosome_1A	1896	1	18	38.607594936708864	0.265937302756154	NA	0	NA	NA	NA	NA	NA	NA	NA	57.333333333333336	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004899	Chromosome_1A	4984	3	72	37.118780096308186	0.4209415018844818	87.94168519891278	72	1	91.740412979351035	11	1	87.59439050701187	61	1	83.92585068562722	46	1	methylated (>=50%)	Q13425	Beta-2-syntrophin (59 kDa dystrophin-associated protein A1 basic component 2) (Syntrophin-3) (SNT3) (Syntrophin-like) (SNTL)	NA	hit, no GO BP
GN002532	Chromosome_1A	7315	4	192	35.65276828434723	0.82596453094897	14.080865068171134	192	0.07291666666666667	35.204081632653065	11	0.36363636363636365	13.411479385610347	181	0.055248618784530384	0.6146572104018913	39	0	sparse (10-50%)	Q32LE4	Gamma-glutamylcyclotransferase (EC 4.3.2.9)	release of cytochrome c from mitochondria [GO:0001836]	hit with GO BP
GN002533	Chromosome_1A	4302	6	55	34.03068340306834	0.44232451712766674	93.38974087784241	55	1	94.96644295302013	11	1	93.0947897049592	44	1	66.57571623465212	33	0.6060606060606061	methylated (>=50%)	Q4R930	ADP-ribosylation factor-like protein 2-binding protein (ARF-like 2-binding protein)	maintenance of protein location in nucleus [GO:0051457]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]	hit with GO BP
GN002525	Chromosome_1A	53992	27	554	35.23299748110831	0.3312582584578669	80.67136220590439	509	0.9469548133595285	84.47109471094711	76	0.9868421052631579	80.2610168365822	433	0.9399538106235565	86.42951251646903	21	1	methylated (>=50%)	Q9Y4E6	WD repeat-containing protein 7 (Rabconnectin-3 beta) (TGF-beta resistance-associated protein TRAG)	vacuolar acidification [GO:0007035]	hit with GO BP
GN004901	Chromosome_1A	678	1	10	42.92035398230089	0.3234732824427481	94.77848101265823	10	1	94.77848101265823	10	1	NA	NA	NA	83.30975954738331	13	0.8461538461538461	methylated (>=50%)	Q9JK84	Partitioning defective 6 homolog gamma (PAR-6 gamma) (PAR6A)	centrosome cycle [GO:0007098]; establishment or maintenance of cell polarity [GO:0007163]; regulation of cellular localization [GO:0060341]	hit with GO BP
GN004902	Chromosome_1A	4348	7	119	34.01563937442502	0.9462026589616517	0.4515309722026245	119	0	0.35555555555555557	27	0	0.4696410600469641	92	0	65.40110226576853	55	0.5818181818181818	unmethylated (<10%)	Q2YDM5	Sperm microtubule inner protein 8 (Testis, prostate and placenta-expressed protein)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN004903	Chromosome_1A	1732	3	30	32.33256351039261	0.6646626159258074	0.5605381165919282	30	0	0.18281535648994515	11	0	0.7275666936135813	19	0	8.616187989556137	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004904	Chromosome_1A	5554	2	161	35.79402232625135	0.9079033404406539	0.5868814729574223	161	0	0.8597883597883598	49	0	0.5293953747561995	112	0	0.37086985839514497	46	0	unmethylated (<10%)	Q9W707	Forkhead box protein F1-B (FoxF1-B) (FoxF1b) (Fork head domain-related protein 13') (xFD-13')	animal organ morphogenesis [GO:0009887]; BMP signaling pathway [GO:0030509]; embryonic digestive tract development [GO:0048566]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; smooth muscle tissue development [GO:0048745]	hit with GO BP
GN002521	Chromosome_1A	3143	3	74	38.720967228762326	0.6326696044828899	0.9286775631500743	74	0	0.6373117033603708	55	0	1.4492753623188406	19	0	0.7149821254468638	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002520	Chromosome_1A	4506	5	124	38.348868175765645	0.7485701653905669	4.2042042042042045	124	0	4.5473684210526315	63	0	3.9789997236805745	61	0	1.589825119236884	42	0	unmethylated (<10%)	A2VE54	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN002834	Chromosome_1A	2482	4	25	31.4665592264303	0.4071522309711286	63.32259549010585	25	0.76	80.43052837573386	16	0.9375	48.13205907906168	9	0.4444444444444444	88.58369098712447	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004906	Chromosome_1A	19059	9	179	33.75308253318642	0.3311156792578638	92.26872612522837	169	0.9467455621301775	95.16587677725119	16	1	91.990534267771	153	0.9411764705882353	54.420493595751324	48	0.5208333333333334	methylated (>=50%)	Q5XLR4	Borealin (Cell division cycle-associated protein 8) (Dasra-B) (DasraB) (DrDasraB)	heart development [GO:0007507]; mitotic sister chromatid segregation [GO:0000070]	hit with GO BP
GN002309	Chromosome_1A	214	1	12	48.598130841121495	0.9625187406296851	0.5602240896358543	12	0	0.5602240896358543	12	0	NA	NA	NA	0.31834460803820136	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004907	Chromosome_1A	15267	7	419	35.593109320757186	0.866857197449381	0.7752306667934937	395	0	0.790273556231003	34	0	0.773953872349208	361	0	0.5577689243027888	44	0	unmethylated (<10%)	Q8VCC1	15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC 1.1.1.141) (Eicosanoid/docosanoid dehydrogenase [NAD(+)]) (EC 1.1.1.-, EC 1.1.1.232) (Prostaglandin dehydrogenase 1)	ductus arteriosus closure [GO:0097070]; female pregnancy [GO:0007565]; kidney development [GO:0001822]; lipoxin biosynthetic process [GO:2001301]; negative regulation of cell cycle [GO:0045786]; ovulation [GO:0030728]; parturition [GO:0007567]; positive regulation of apoptotic process [GO:0043065]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; prostaglandin catabolic process [GO:1905344]; prostaglandin metabolic process [GO:0006693]; regulation of prostaglandin catabolic process [GO:1905828]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to lipopolysaccharide [GO:0032496]; thrombin-activated receptor signaling pathway [GO:0070493]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN004908	Chromosome_1A	1629	3	8	32.78084714548803	0.18296946296946298	93.66438356164383	8	1	97.38430583501005	6	1	72.41379310344827	2	1	93.95109395109395	10	1	methylated (>=50%)	Q1JQ93	Dolichol-phosphate mannosyltransferase subunit 1 (EC 2.4.1.83) (Dolichol-phosphate mannose synthase subunit 1) (DPM synthase subunit 1) (Dolichyl-phosphate beta-D-mannosyltransferase subunit 1) (Mannose-P-dolichol synthase subunit 1) (MPD synthase subunit 1)	dolichol phosphate mannose biosynthetic process [GO:0180047]; dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; dolichyl monophosphate biosynthetic process [GO:0043048]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked glycosylation via mannose [GO:0035269]	hit with GO BP
GN002516	Chromosome_1A	8550	3	190	36.187134502923975	0.679623795074495	59.32557445538645	177	0.5028248587570622	39.217557251908396	20	0.45	61.66574125485841	157	0.5095541401273885	0.49261083743842365	43	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002513	Chromosome_1A	723	2	19	47.302904564315355	0.4800461280402572	1.8181818181818181	9	0	1.8181818181818181	9	0	NA	NA	NA	10.528010302640052	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004910	Chromosome_1A	837	1	39	46.117084826762245	0.8797466648699637	49.858889934148635	39	0.28205128205128205	49.858889934148635	39	0.28205128205128205	NA	NA	NA	1.075268817204301	38	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004911	Chromosome_1A	213	1	5	56.33802816901409	0.3081597222222222	97.10982658959537	5	1	97.10982658959537	5	1	NA	NA	NA	73.12775330396475	42	0.8809523809523809	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004912	Chromosome_1A	2096	2	34	41.221374045801525	0.3842387905191192	94.26952141057934	34	1	93.60902255639098	24	1	95.61068702290076	10	1	87.72587794067508	31	1	methylated (>=50%)	Q62985	SH2B adapter protein 1 (FceRI gamma-chain-interacting protein SH2-B) (SH2 domain-containing protein 1B) (SH2-B PH domain-containing signaling mediator 1)	cell motility [GO:0048870]; intracellular signal transduction [GO:0035556]; lamellipodium assembly [GO:0030032]; positive regulation of mitotic nuclear division [GO:0045840]; positive regulation of SMAD protein signal transduction [GO:0060391]; regulation of DNA biosynthetic process [GO:2000278]	hit with GO BP
GN002507	Chromosome_1A	977	2	12	34.08393039918116	0.4237692474517458	89.13260219341974	12	1	89.13260219341974	12	1	NA	NA	NA	87.48137108792847	47	0.9361702127659575	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002508	Chromosome_1A	32416	11	386	35.02282823297137	0.38984515086362675	84.6479926855623	372	0.9704301075268817	89.03863432165319	35	0.9714285714285714	84.20040300421323	337	0.9703264094955489	93.02819036071537	47	1	methylated (>=50%)	Q5ZMH1	Septin-2	cilium assembly [GO:0060271]; cytoskeleton-dependent cytokinesis [GO:0061640]; intracellular protein localization [GO:0008104]; regulation of exocytosis [GO:0017157]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN002509	Chromosome_1A	50979	17	448	36.083485356715514	0.2702559244721129	54.82094858232897	435	0.5770114942528736	76.75769901220221	32	0.84375	53.05223705785898	403	0.5558312655086849	92.32786885245902	19	1	methylated (>=50%)	Q5R6R7	Septin-4	flagellated sperm motility [GO:0030317]; hematopoietic stem cell homeostasis [GO:0061484]; neuron migration [GO:0001764]; spermatid differentiation [GO:0048515]	hit with GO BP
GN002510	Chromosome_1A	346	2	14	46.53179190751445	0.7510077519379845	0.672645739910314	14	0	0.7194244604316546	13	0	0	1	0	0.23166023166023167	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002511	Chromosome_1A	2541	5	99	41.125541125541126	0.9216843632526545	0.5017163982043834	99	0	0.39154267815191857	71	0	0.7299270072992701	28	0	0.7705192629815746	43	0	unmethylated (<10%)	P49109	Flavin-containing monooxygenase 5 (FMO 5) (Dimethylaniline monooxygenase [N-oxide-forming] 5) (EC 1.14.13.8) (Dimethylaniline oxidase 5) (Hepatic flavin-containing monooxygenase 5) (NADPH oxidase) (EC 1.6.3.1)	regulation of cholesterol metabolic process [GO:0090181]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN004913	Chromosome_1A	417	1	1	39.80815347721823	0.0610989010989011	3.8461538461538463	1	0	3.8461538461538463	1	0	NA	NA	NA	0.4590665646518745	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004914	Chromosome_1A	1539	1	62	42.30019493177388	0.9005946201038225	0.700218818380744	62	0	0.700218818380744	62	0	NA	NA	NA	0.3524229074889868	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004915	Chromosome_1A	3657	6	82	37.817883511074655	0.6272989707974228	0.7273706896551724	82	0	0.7060333761232349	40	0	0.7428040854224698	42	0	0.7230430682175416	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002943	Chromosome_1A	823	2	9	38.27460510328068	0.30277141922825374	0.4975124378109453	9	0	0.6289308176100629	7	0	0	2	0	1.9955654101995566	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002506	Chromosome_1A	6812	4	131	34.703464474456844	0.6396477956044696	0.8402184567987677	131	0	0.5170630816959669	25	0	0.8908325234855847	106	0	0.6161429451632778	34	0	unmethylated (<10%)	Q9CWG1	Glioma pathogenesis-related protein 1 (GliPR 1)	NA	hit, no GO BP
GN004916	Chromosome_1A	669	1	27	42.45142002989537	0.9012123933542883	80.05780346820809	12	1	80.05780346820809	12	1	NA	NA	NA	89.18315252074026	62	0.9838709677419355	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004917	Chromosome_1A	378	1	17	48.94179894179894	0.7574257425742574	92.3913043478261	17	1	92.3913043478261	17	1	NA	NA	NA	86.60929432013769	37	0.9459459459459459	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005921	Chromosome_1A	992	1	20	38.50806451612903	0.5463758537122714	75.65424266455194	20	0.95	75.65424266455194	20	0.95	NA	NA	NA	75.97422522246087	45	0.9555555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004918	Chromosome_1A	516	3	2	33.333333333333336	0.14107997265892003	76.96335078534031	2	1	86.48648648648648	1	1	63.75	1	1	73.65661861074705	14	0.9285714285714286	NA	NA	NA	NA	no Swiss-Prot hit
GN004919	Chromosome_1A	369	1	10	40.37940379403794	0.6783088235294118	0.18148820326678766	10	0	0.18148820326678766	10	0	NA	NA	NA	0.6437768240343348	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004920	Chromosome_1A	513	1	6	43.27485380116959	0.2610244233378562	87.3015873015873	6	1	87.3015873015873	6	1	NA	NA	NA	77.9467680608365	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004921	Chromosome_1A	540	2	16	35.18518518518518	0.9641781051221961	0.5025125628140703	8	0	0	7	0	3.125	1	0	0.5144694533762058	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004922	Chromosome_1A	561	1	21	48.1283422459893	0.664055013809819	0.1669449081803005	21	0	0.1669449081803005	21	0	NA	NA	NA	0.5257623554153522	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004923	Chromosome_1A	306	1	6	41.1764705882353	0.46551724137931033	3.11284046692607	6	0	3.11284046692607	6	0	NA	NA	NA	3.325635103926097	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004924	Chromosome_1A	480	1	7	52.083333333333336	0.22191400832177532	81.81818181818181	1	1	81.81818181818181	1	1	NA	NA	NA	93.73144176839327	50	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004925	Chromosome_1A	219	1	5	53.42465753424658	0.32686567164179103	NA	0	NA	NA	NA	NA	NA	NA	NA	95.06263817243921	40	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004926	Chromosome_1A	288	1	10	53.47222222222222	0.49104859335038364	96.44970414201184	9	1	96.44970414201184	9	1	NA	NA	NA	95.31859557867361	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004927	Chromosome_1A	1179	1	16	42.917726887192536	0.29500351864883884	93.05816135084427	16	1	93.05816135084427	16	1	NA	NA	NA	91.51570048309179	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002486	Chromosome_1A	57684	23	703	35.413632896470425	0.3890716818642351	75.75047427742439	670	0.8865671641791045	72.84382284382285	52	0.9230769230769231	75.92763609670621	618	0.883495145631068	82.27717671303452	29	0.9655172413793104	methylated (>=50%)	Q8IVF4	Dynein axonemal heavy chain 10 (Axonemal beta dynein heavy chain 10) (Ciliary dynein heavy chain 10)	cilium movement involved in cell motility [GO:0060294]	hit with GO BP
GN017464	Chromosome_1A	244	1	12	54.50819672131148	0.6684931506849315	52.16606498194946	12	0.75	52.16606498194946	12	0.75	NA	NA	NA	47.774244833068366	43	0.6744186046511628	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001277	Chromosome_1A	1692	2	37	38.4160756501182	0.5938024642176252	0.5954743946010321	37	0	0.8806262230919765	17	0	0.40080160320641284	20	0	0.565191970376145	64	0	unmethylated (<10%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN004928	Chromosome_1A	1560	2	66	39.743589743589745	1.0729917879027888	0.5523066926575698	66	0	0.7518796992481203	28	0	0.4253056884635832	38	0	0.3819709702062643	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004929	Chromosome_1A	417	1	14	46.52278177458034	0.6271350306155333	18.711656441717793	13	0	18.711656441717793	13	0	NA	NA	NA	9.19175911251981	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004930	Chromosome_1A	285	1	12	48.07017543859649	0.7402597402597403	41.56729131175469	12	0.16666666666666666	41.56729131175469	12	0.16666666666666666	NA	NA	NA	15.434733767692654	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004931	Chromosome_1A	162	1	13	63.58024691358025	0.9813606710158435	NA	0	NA	NA	NA	NA	NA	NA	NA	3.6383991043940664	86	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004932	Chromosome_1A	228	1	6	46.92982456140351	0.6047745358090185	1.0638297872340425	4	0	1.0638297872340425	4	0	NA	NA	NA	3.843710292249047	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002485	Chromosome_1A	846	2	9	41.13475177304964	0.2536309127248501	NA	0	NA	NA	NA	NA	NA	NA	NA	10.18363939899833	49	0	NA	Q96MB7	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN002478	Chromosome_1A	750	1	16	44.13333333333333	0.4398826979472141	NA	0	NA	NA	NA	NA	NA	NA	NA	88.2996632996633	34	0.9411764705882353	NA	Q8N328	PiggyBac transposable element-derived protein 3	NA	hit, no GO BP
GN002479	Chromosome_1A	234	1	12	47.00854700854701	0.9483282674772037	62.244897959183675	12	1	62.244897959183675	12	1	NA	NA	NA	78.16972131559126	69	0.9710144927536232	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002476	Chromosome_1A	750	1	15	44	0.41506788665879574	100	3	1	100	3	1	NA	NA	NA	94.40337909186906	27	1	NA	Q8N328	PiggyBac transposable element-derived protein 3	NA	hit, no GO BP
GN002475	Chromosome_1A	402	1	21	44.02985074626866	1.1454545454545455	96.875	8	1	96.875	8	1	NA	NA	NA	93.54453078302451	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002474	Chromosome_1A	827	2	5	40.87061668681983	0.14482347996637715	73.61963190184049	5	1	73.61963190184049	5	1	NA	NA	NA	88.18514007308161	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002473	Chromosome_1A	1327	2	11	40.617935192162776	0.2014824425795053	75.53516819571865	11	0.8181818181818182	75.53516819571865	11	0.8181818181818182	NA	NA	NA	72.3425692695214	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011190	Chromosome_1A	689	2	22	46.44412191582003	0.6015079365079365	74.39024390243902	22	0.9090909090909091	79.72709551656921	17	0.9411764705882353	62.22222222222222	5	0.8	90.11900468806347	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020290	Chromosome_1A	1137	3	12	36.23570800351803	0.32154977375565613	2.0833333333333335	2	0	2.0833333333333335	2	0	NA	NA	NA	16.115107913669064	9	0.2222222222222222	NA	NA	NA	NA	no Swiss-Prot hit
GN004933	Chromosome_1A	546	1	21	39.92673992673993	0.9663716814159292	0.5813953488372093	21	0	0.5813953488372093	21	0	NA	NA	NA	0.4206098843322818	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002468	Chromosome_1A	4266	4	86	34.786685419596814	0.6666012558869702	44.24778761061947	60	0.48333333333333334	36.03305785123967	15	0.3333333333333333	46.18991793669402	45	0.5333333333333333	86.19224641529475	27	0.9259259259259259	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011663	Chromosome_1A	1881	2	59	40.4040404040404	0.7687442852788784	20.216163104888235	58	0	14.141414141414142	21	0	21.91823899371069	37	0	85.14851485148515	36	0.9444444444444444	sparse (10-50%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN002469	Chromosome_1A	294	1	4	45.57823129251701	0.2692307692307692	87.89473684210526	4	1	87.89473684210526	4	1	NA	NA	NA	95.27777777777777	48	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004935	Chromosome_1A	345	1	5	44.34782608695652	0.2957818930041152	94.11764705882354	5	1	94.11764705882354	5	1	NA	NA	NA	82.89867464728516	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004936	Chromosome_1A	468	1	11	52.35042735042735	0.34863876472978467	75.60975609756098	2	1	75.60975609756098	2	1	NA	NA	NA	66.48351648351648	24	0.875	NA	NA	NA	NA	no Swiss-Prot hit
GN004937	Chromosome_1A	468	1	11	52.35042735042735	0.34863876472978467	70.2127659574468	3	0.6666666666666666	70.2127659574468	3	0.6666666666666666	NA	NA	NA	69.51596292481977	19	1	NA	NA	NA	NA	no Swiss-Prot hit
GN004938	Chromosome_1A	877	2	7	35.34777651083238	0.25590895827254156	52.338530066815146	7	0.5714285714285714	52.534562211981566	4	0.5	52.1551724137931	3	0.6666666666666666	70.34482758620689	20	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004939	Chromosome_1A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN004940	Chromosome_1A	348	1	8	35.3448275862069	0.7504043126684636	8.913649025069638	8	0	8.913649025069638	8	0	NA	NA	NA	6.451612903225806	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002466	Chromosome_1A	183	1	10	48.63387978142077	0.9270516717325228	1.6483516483516483	10	0	1.6483516483516483	10	0	NA	NA	NA	1.971830985915493	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004942	Chromosome_1A	174	1	9	44.827586206896555	1.0302631578947368	96.38009049773756	9	1	96.38009049773756	9	1	NA	NA	NA	93.95298484379833	64	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004943	Chromosome_1A	960	1	32	41.875	0.7619047619047619	95.21410579345088	14	1	95.21410579345088	14	1	NA	NA	NA	89.08256880733946	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004944	Chromosome_1A	201	1	8	49.25373134328358	0.6617283950617284	90.47619047619048	8	1	90.47619047619048	8	1	NA	NA	NA	85.61362301820317	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004945	Chromosome_1A	58599	16	900	35.79412617962764	0.4805004330681996	88.79456169472769	890	0.9617977528089887	74.9219098616689	38	0.7631578947368421	89.30409414232798	852	0.9706572769953051	78.46003898635477	61	0.8360655737704918	methylated (>=50%)	Q3USH5	Splicing factor, suppressor of white-apricot homolog (Splicing factor, arginine/serine-rich 8) (Suppressor of white apricot protein homolog)	alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA 5'-splice site recognition [GO:0000395]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]	hit with GO BP
GN004946	Chromosome_1A	876	1	26	38.81278538812786	0.8318784469849154	55.13157894736842	17	0.35294117647058826	55.13157894736842	17	0.35294117647058826	NA	NA	NA	84.6129135881786	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004947	Chromosome_1A	1254	2	41	44.81658692185008	0.6523211997411726	1.0355029585798816	39	0	1.3618677042801557	33	0	0	6	0	0.48598130841121495	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004948	Chromosome_1A	393	1	14	44.274809160305345	0.7316489361702128	0.9615384615384616	14	0	0.9615384615384616	14	0	NA	NA	NA	4.480796586059744	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004949	Chromosome_1A	645	1	28	39.37984496124031	1.1253738783649052	1.0396975425330812	28	0	1.0396975425330812	28	0	NA	NA	NA	0.6467661691542289	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002458	Chromosome_1A	744	1	25	42.876344086021504	0.7337278106508875	0.23337222870478413	25	0	0.23337222870478413	25	0	NA	NA	NA	0.3966679888932963	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002457	Chromosome_1A	363	1	20	53.71900826446281	0.840666975451598	0.6349206349206349	19	0	0.6349206349206349	19	0	NA	NA	NA	0.5489478499542544	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002456	Chromosome_1A	1053	1	29	38.9363722697056	0.7280421514400153	0.7596685082872928	29	0	0.7596685082872928	29	0	NA	NA	NA	0.45848191543555783	59	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN002455	Chromosome_1A	16891	7	225	36.51648807057013	0.40137580766785447	73.69831546707503	223	0.7623318385650224	21.6712580348944	23	0.17391304347826086	78.43120875449002	200	0.83	8.322087269455691	75	0.013333333333333334	methylated (>=50%)	Q6GPJ4	rRNA methyltransferase 3, mitochondrial (EC 2.1.1.-) (RNA methyltransferase-like protein 1) (rRNA (guanosine-2'-O)-methyltransferase)	RNA processing [GO:0006396]	hit with GO BP
GN018044	Chromosome_1A	408	1	19	40.931372549019606	1.1373239436619718	100	3	1	100	3	1	NA	NA	NA	89.17171717171718	52	0.9807692307692307	NA	NA	NA	NA	no Swiss-Prot hit
GN002454	Chromosome_1A	13267	4	368	35.71267053591618	0.8700042642585812	1.4743105821750522	368	0	0.5154639175257731	13	0	1.499749282034918	355	0	0.7330246913580247	40	0	unmethylated (<10%)	O97788	Fatty acid-binding protein, adipocyte (AP2) (Adipocyte lipid-binding protein) (ALBP) (Adipocyte-type fatty acid-binding protein) (A-FABP) (AFABP) (Fatty acid-binding protein 4)	fatty acid transport [GO:0015908]; long-chain fatty acid transport [GO:0015909]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of fat cell proliferation [GO:0070346]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN002453	Chromosome_1A	606	1	12	43.06930693069307	0.4280668707322816	0.6024096385542169	9	0	0.6024096385542169	9	0	NA	NA	NA	1.2600229095074456	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002452	Chromosome_1A	55643	12	644	34.22892367413691	0.39610699694231033	83.05179300649365	641	0.9609984399375975	93.88127853881278	42	1	82.49536635150037	599	0.9582637729549248	89.69289019772823	25	1	methylated (>=50%)	Q8BTI8	Serine/arginine repetitive matrix protein 2	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN002451	Chromosome_1A	639	1	25	39.280125195618155	1.039362394274561	71.80739706908584	25	0.96	71.80739706908584	25	0.96	NA	NA	NA	78.6512928022362	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002450	Chromosome_1A	657	1	22	49.61948249619483	0.544755587381751	54.21686746987952	19	0.5789473684210527	54.21686746987952	19	0.5789473684210527	NA	NA	NA	40.32258064516129	14	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002449	Chromosome_1A	1257	1	45	43.993635640413686	0.7432006306661411	40	1	0	40	1	0	NA	NA	NA	76.77496991576415	15	0.9333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN002448	Chromosome_1A	1365	1	26	40.8058608058608	0.45799457994579945	66.4323374340949	19	0.8421052631578947	66.4323374340949	19	0.8421052631578947	NA	NA	NA	77.25306416726748	47	0.8723404255319149	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002447	Chromosome_1A	267	1	10	45.69288389513109	0.7206477732793523	92.83387622149837	10	1	92.83387622149837	10	1	NA	NA	NA	74.91601343784994	48	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002446	Chromosome_1A	756	1	36	46.560846560846564	0.8938811705586758	NA	0	NA	NA	NA	NA	NA	NA	NA	69.17040358744394	21	0.7142857142857143	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN002445	Chromosome_1A	13581	5	251	35.49812237685001	0.5867047725266044	81.10593351972662	250	0.916	75.33980582524272	8	0.875	81.29653401797177	242	0.9173553719008265	82.98611111111111	39	0.9743589743589743	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004950	Chromosome_1A	10945	5	161	35.084513476473276	0.47812915479582146	79.00438483363425	160	0.9125	80.72487644151565	13	0.8461538461538461	78.90965166908563	147	0.9183673469387755	70.1707097933513	15	0.7333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002444	Chromosome_1A	11306	4	199	38.07712718910313	0.4864376943410145	87.58498065055956	185	0.9891891891891892	86.0036832412523	10	1	87.6801951652251	175	0.9885714285714285	73.72330547818012	13	1	methylated (>=50%)	Q8VE96	Solute carrier family 35 member F6 (ANT2-binding protein) (ANT2BP) (Transport and Golgi organization 9 homolog)	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; positive regulation of cell population proliferation [GO:0008284]	hit with GO BP
GN002443	Chromosome_1A	543	1	22	39.96316758747698	1.02435259818213	0.8835341365461847	22	0	0.8835341365461847	22	0	NA	NA	NA	0.8795411089866156	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002442	Chromosome_1A	709	2	23	37.94076163610719	0.9069521690767519	0.5385996409335727	23	0	0.4909983633387889	14	0	0.5964214711729622	9	0	2.149229521492295	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002441	Chromosome_1A	363	1	9	49.586776859504134	0.41333502024291496	1.0460251046025104	9	0	1.0460251046025104	9	0	NA	NA	NA	0.5490196078431373	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002440	Chromosome_1A	687	1	17	40.756914119359536	0.6002775493421053	0	17	0	0	17	0	NA	NA	NA	0.38299502106472616	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002439	Chromosome_1A	33560	8	410	34.26102502979738	0.41718061568492515	85.58651530787753	392	0.9540816326530612	93.29608938547486	23	1	85.14010755731672	369	0.9512195121951219	86.36859323882224	17	1	methylated (>=50%)	O13016	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48) (CPTP1) (Protein-tyrosine phosphatase 1B) (PTP-1B)	actin cytoskeleton organization [GO:0030036]; endoplasmic reticulum unfolded protein response [GO:0030968]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of PERK-mediated unfolded protein response [GO:1903898]; peptidyl-tyrosine dephosphorylation [GO:0035335]; regulation of endocytosis [GO:0030100]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN004951	Chromosome_1A	6833	6	173	35.489536074930484	0.8086755635579539	0.7800312012480499	173	0	0.7518796992481203	49	0	0.7898894154818326	124	0	0.3225806451612903	64	0	unmethylated (<10%)	P34586	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)	calcium ion transmembrane transport [GO:0070588]; regulation of cytosolic calcium ion concentration [GO:0051480]; single fertilization [GO:0007338]	hit with GO BP
GN004952	Chromosome_1A	2838	7	95	37.66737138830162	0.9452438049560352	0.4857737682165163	94	0	0.3414425949637217	49	0	0.6565656565656566	45	0	1.341381623071764	37	0	unmethylated (<10%)	Q9JMI9	Short transient receptor potential channel 3 (TrpC3) (Trp-related protein 3)	calcium ion transmembrane transport [GO:0070588]; positive regulation of calcium ion transport into cytosol [GO:0010524]; positive regulation of cardiac muscle hypertrophy in response to stress [GO:1903244]; regulation of cytosolic calcium ion concentration [GO:0051480]; response to ATP [GO:0033198]; response to calcium ion [GO:0051592]; single fertilization [GO:0007338]	hit with GO BP
GN002437	Chromosome_1A	954	1	29	39.308176100628934	0.7869943676395289	0.6958942240779401	29	0	0.6958942240779401	29	0	NA	NA	NA	1.043115438108484	34	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN019719	Chromosome_1A	258	1	13	52.713178294573645	0.7255029201817002	NA	0	NA	NA	NA	NA	NA	NA	NA	10.588235294117647	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002434	Chromosome_1A	2727	7	77	36.780344701136784	0.8350393700787402	0.6287425149700598	77	0	0.6765327695560254	58	0	0.5128205128205128	19	0	3.4403669724770642	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002435	Chromosome_1A	834	1	31	40.28776978417266	0.9335259072034663	5.495356037151703	31	0	5.495356037151703	31	0	NA	NA	NA	0.8591885441527446	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002436	Chromosome_1A	13607	8	167	38.00984787241861	0.3398721677930084	74.92651757188499	139	0.9424460431654677	73.67886178861788	52	0.9230769230769231	75.34574014000341	87	0.9540229885057471	71.15869017632242	14	0.9285714285714286	methylated (>=50%)	Q86V15	Zinc finger protein castor homolog 1 (Castor-related protein) (Putative survival-related protein) (Zinc finger protein 693)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of neuron differentiation [GO:0045664]	hit with GO BP
GN002430	Chromosome_1A	222	1	4	45.04504504504504	0.3553421368547419	75.86206896551724	4	1	75.86206896551724	4	1	NA	NA	NA	68.23529411764706	13	0.6923076923076923	NA	NA	NA	NA	no Swiss-Prot hit
GN002429	Chromosome_1A	261	1	1	34.865900383141764	0.12620889748549324	77.04918032786885	1	1	77.04918032786885	1	1	NA	NA	NA	83.73615307150051	41	0.975609756097561	NA	NA	NA	NA	no Swiss-Prot hit
GN004953	Chromosome_1A	1529	2	50	38.52190974493133	0.884592242895492	0.41478129713423834	50	0	0.30318342597271347	42	0	0.7429420505200595	8	0	0.5743825387708213	30	0	unmethylated (<10%)	Q9BXJ5	Complement C1q tumor necrosis factor-related protein 2	regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN004954	Chromosome_1A	17480	6	364	37.40846681922197	0.5955083795076203	73.8029197080292	303	0.768976897689769	89.74763406940063	23	0.9565217391304348	72.17664092664093	280	0.7535714285714286	76.72413793103448	12	0.75	methylated (>=50%)	Q8TF42	Ubiquitin-associated and SH3 domain-containing protein B (EC 3.1.3.48) (Cbl-interacting protein p70) (Suppressor of T-cell receptor signaling 1) (STS-1) (T-cell ubiquitin ligand 2) (TULA-2) (Tyrosine-protein phosphatase STS1/TULA2)	collagen-activated tyrosine kinase receptor signaling pathway [GO:0038063]; negative regulation of bone resorption [GO:0045779]; negative regulation of signal transduction [GO:0009968]; platelet aggregation [GO:0070527]; regulation of osteoclast differentiation [GO:0045670]; regulation of release of sequestered calcium ion into cytosol [GO:0051279]	hit with GO BP
GN002420	Chromosome_1A	4277	3	128	36.80149637596446	0.8839445015847694	0.5320092214931725	121	0	0.8111239860950173	31	0	0.4815745393634841	90	0	0.6619385342789598	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004955	Chromosome_1A	8130	8	91	35.75645756457565	0.35434915051612753	90.25556717979376	91	0.989010989010989	87.26611226611226	34	0.9705882352941176	91.46213551499895	57	1	36.758893280632414	17	0.11764705882352941	methylated (>=50%)	Q6IDD9	NAD(+) hydrolase sarm1 (NADase sarm1) (EC 3.2.2.6) (Sterile alpha and TIR motif-containing protein 1) (Tir-1 homolog)	antiviral innate immune response [GO:0140374]; defense response to virus [GO:0051607]; NAD+ catabolic process [GO:0019677]; positive regulation of receptor signaling pathway via STAT [GO:1904894]; response to axon injury [GO:0048678]; signal transduction [GO:0007165]	hit with GO BP
GN002418	Chromosome_1A	313	2	9	40.2555910543131	0.721382842509603	0.487012987012987	9	0	0.6550218340611353	7	0	0	2	0	33.37507827175955	37	0.43243243243243246	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002417	Chromosome_1A	9334	7	81	35.95457467323762	0.26905271383981616	76.31812140008861	81	0.8765432098765432	78.34674469641551	26	0.9615384615384616	75.43692405465522	55	0.8363636363636363	82.4390243902439	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002416	Chromosome_1A	1125	1	42	42.31111111111111	0.839507488939822	1.254180602006689	42	0	1.254180602006689	42	0	NA	NA	NA	67.92626728110599	14	0.7857142857142857	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002415	Chromosome_1A	2953	3	52	36.67456823569252	0.5238137472283814	71.79117392558408	52	0.7307692307692307	72.36024844720497	9	0.6666666666666666	71.7329093799682	43	0.7441860465116279	7.4034334763948495	65	0.046153846153846156	methylated (>=50%)	Q9Y6H1	Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 (Aging-associated gene 10 protein) (HCV NS2 trans-regulated protein) (NS2TP)	cellular response to oxidative stress [GO:0034599]; mitochondrion organization [GO:0007005]; positive regulation of mitochondrial ATP synthesis coupled electron transport [GO:1905448]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cellular response to hypoxia [GO:1900037]; regulation of generation of precursor metabolites and energy [GO:0043467]	hit with GO BP
GN002414	Chromosome_1A	2124	5	59	42.325800376647834	0.6209603092017244	0.8805723720418271	59	0	1.2263099219620959	33	0	0.5434782608695652	26	0	0.5311614730878187	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002413	Chromosome_1A	16724	4	218	34.99162879693853	0.42628147566131624	67.49135208302	215	0.7953488372093023	23.037974683544302	6	0	68.852204913586	209	0.8181818181818182	1.71606864274571	39	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002412	Chromosome_1A	3806	3	30	34.68208092485549	0.26299302554842036	93.0293501048218	30	0.9666666666666667	93.75	3	1	92.97052154195012	27	0.9629629629629629	92.26618705035972	16	1	methylated (>=50%)	Q99623	Prohibitin-2 (B-cell receptor-associated protein BAP37) (D-prohibitin) (Repressor of estrogen receptor activity)	antiviral innate immune response [GO:0140374]; B cell activation [GO:0042113]; cell migration [GO:0016477]; mitochondrion organization [GO:0007005]; mitophagy [GO:0000423]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of immunoglobulin production [GO:0002639]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; protein import into nucleus [GO:0006606]; protein stabilization [GO:0050821]; regulation of cardiolipin metabolic process [GO:1900208]; regulation of transcription by RNA polymerase II [GO:0006357]; RIG-I signaling pathway [GO:0039529]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN004958	Chromosome_1A	291	2	3	35.39518900343643	0.34975961538461536	0	3	0	0	3	0	NA	NA	NA	0.5536332179930796	61	0	NA	P50093	Mitochondrial prohibitin complex protein 2 (Prohibitin-2)	defecation [GO:0030421]; embryo development ending in birth or egg hatching [GO:0009792]; gonad development [GO:0008406]; mitochondrion organization [GO:0007005]; mitophagy [GO:0000423]; oogenesis [GO:0048477]; positive regulation of multicellular organism growth [GO:0040018]; protein stabilization [GO:0050821]; regulation of nematode pharyngeal pumping [GO:0043051]; regulation of oxidative phosphorylation [GO:0002082]; response to oxidative stress [GO:0006979]; spermatogenesis [GO:0007283]	hit with GO BP
GN004959	Chromosome_1A	342	1	8	45.6140350877193	0.5802757158006363	1.1627906976744187	4	0	1.1627906976744187	4	0	NA	NA	NA	0.9768009768009768	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004960	Chromosome_1A	1025	2	20	45.26829268292683	0.38172913989907453	1.0351966873706004	20	0	1.1904761904761905	16	0	0.6802721088435374	4	0	0.3271537622682661	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004961	Chromosome_1A	45016	15	550	35.52736804691665	0.39728713547900824	77.60578904490343	469	0.8699360341151386	79.04676258992805	18	0.9444444444444444	77.52467729688686	451	0.8669623059866962	87.27272727272727	15	1	methylated (>=50%)	Q6ZMV7	Protein LEKR1	NA	hit, no GO BP
GN004962	Chromosome_1A	390	1	8	41.02564102564103	0.4878048780487805	85.20710059171597	8	1	85.20710059171597	8	1	NA	NA	NA	90.72072072072072	34	0.9411764705882353	methylated (>=50%)	Q6TLE6	Calcium release-activated calcium channel protein 1 (Protein orai-1) (Transmembrane protein 142A)	positive regulation of calcium ion transport [GO:0051928]; sarcomere organization [GO:0045214]; store-operated calcium entry [GO:0002115]	hit with GO BP
GN002391	Chromosome_1A	50887	16	727	35.70067011220941	0.4499495682254401	73.09933631899854	664	0.8343373493975904	84.75016223231668	54	0.9444444444444444	72.04272598870057	610	0.8245901639344262	30.76923076923077	21	0.14285714285714285	methylated (>=50%)	Q8NHM5	Lysine-specific demethylase 2B (EC 1.14.11.27) (CXXC-type zinc finger protein 2) (F-box and leucine-rich repeat protein 10) (F-box protein FBL10) (F-box/LRR-repeat protein 10) (JmjC domain-containing histone demethylation protein 1B) (Jumonji domain-containing EMSY-interactor methyltransferase motif protein) (Protein JEMMA) (Protein-containing CXXC domain 2) ([Histone-H3]-lysine-36 demethylase 1B)	chromatin remodeling [GO:0006338]; embryonic camera-type eye morphogenesis [GO:0048596]; forebrain development [GO:0030900]; fourth ventricle development [GO:0021592]; heterochromatin formation [GO:0031507]; hindbrain development [GO:0030902]; initiation of neural tube closure [GO:0021993]; lateral ventricle development [GO:0021670]; midbrain development [GO:0030901]; midbrain-hindbrain boundary morphogenesis [GO:0021555]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neural precursor cell proliferation [GO:2000178]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; spermatogenesis [GO:0007283]; third ventricle development [GO:0021678]	hit with GO BP
GN004963	Chromosome_1A	162	1	2	42.592592592592595	0.30623818525519847	50	2	0.5	50	2	0.5	NA	NA	NA	53.026196928635954	16	0.375	NA	NA	NA	NA	no Swiss-Prot hit
GN004964	Chromosome_1A	309	1	1	41.74757281553398	0.07767722473604827	53.84615384615385	1	1	53.84615384615385	1	1	NA	NA	NA	66.66666666666667	12	0.9166666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN002392	Chromosome_1A	17817	8	188	33.81040579222091	0.3692734082809903	77.26595942676344	183	0.8743169398907104	73.67647058823529	14	0.8571428571428571	77.5084442678323	169	0.8757396449704142	57.59229534510433	42	0.5238095238095238	methylated (>=50%)	P49951	Clathrin heavy chain 1	clathrin coat assembly [GO:0048268]; clathrin coat disassembly [GO:0072318]; clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; mitotic cell cycle [GO:0000278]; negative regulation of hyaluronan biosynthetic process [GO:1900126]	hit with GO BP
GN002393	Chromosome_1A	6759	4	90	33.45169403757952	0.4767132949335841	78.1456953642384	89	0.8764044943820225	42.70152505446623	6	0.3333333333333333	80.84189592310241	83	0.9156626506024096	35.644171779141104	33	0.30303030303030304	methylated (>=50%)	Q58CS6	Intraflagellar transport protein 20 homolog	cilium assembly [GO:0060271]; positive regulation of cilium assembly [GO:0045724]; protein localization to ciliary membrane [GO:1903441]; protein localization to cilium [GO:0061512]; regulation of autophagosome assembly [GO:2000785]; regulation of cilium assembly [GO:1902017]; regulation of platelet-derived growth factor receptor-alpha signaling pathway [GO:2000583]; spermatogenesis [GO:0007283]	hit with GO BP
GN002394	Chromosome_1A	5235	5	71	34.594078319006684	0.4543137715065198	82.53936615507276	71	0.8450704225352113	77.0011273957159	17	0.5294117647058824	83.72881355932203	54	0.9444444444444444	60.580563735801434	66	0.6515151515151515	methylated (>=50%)	Q7TPL3	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (BTB/POZ domain-containing protein KCTD10)	angiogenesis [GO:0001525]; cilium assembly [GO:0060271]; establishment of endothelial barrier [GO:0061028]; heart development [GO:0007507]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of Rho protein signal transduction [GO:0035024]; positive regulation of cilium assembly [GO:0045724]; positive regulation of ferroptosis [GO:0160020]; positive regulation of protein K63-linked ubiquitination [GO:1902523]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN002395	Chromosome_1A	432	1	18	43.51851851851852	0.9097929097929098	0.6906077348066298	18	0	0.6906077348066298	18	0	NA	NA	NA	0.8661758336942399	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004966	Chromosome_1A	1914	3	50	36.1546499477534	0.7999331299368914	0.4725554343874955	50	0	0.5797101449275363	37	0	0.29239766081871343	13	0	5.041551246537396	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004967	Chromosome_1A	264	1	9	45.45454545454545	0.660734149054505	54.54545454545455	9	0.6666666666666666	54.54545454545455	9	0.6666666666666666	NA	NA	NA	53.48075348075348	54	0.7222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004968	Chromosome_1A	3218	2	35	31.9763828464885	0.4270849923023836	87.83948115119578	35	0.9714285714285714	84.41558441558442	3	1	88.0674448767834	32	0.96875	32.77074542897328	39	0.23076923076923078	methylated (>=50%)	A0JMH0	Aspartate beta-hydroxylase domain-containing protein 2 (EC 1.14.11.-)	NA	hit, no GO BP
GN004969	Chromosome_1A	3779	4	28	41.99523683514157	0.17079068085779495	77.4364406779661	21	0.8095238095238095	82.38805970149254	6	1	74.71264367816092	15	0.7333333333333333	71.71717171717172	15	0.9333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002399	Chromosome_1A	19872	13	193	33.84158615136876	0.3392339265061089	91.17740906190173	190	0.9052631578947369	78.42548076923077	41	0.7073170731707317	93.12913907284768	149	0.959731543624161	37.763578274760384	53	0.33962264150943394	methylated (>=50%)	G5E8Z2	Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAF(II)105) (TAFII-105) (TAFII105)	mRNA transcription by RNA polymerase II [GO:0042789]; positive regulation of stem cell proliferation [GO:2000648]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; regulation of transcription by RNA polymerase II [GO:0006357]; RNA polymerase II preinitiation complex assembly [GO:0051123]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN004970	Chromosome_1A	676	2	23	42.751479289940825	0.7466384940453323	0.9162303664921466	23	0	0.8912655971479501	18	0	0.9852216748768473	5	0	8.412288257249498	41	0	unmethylated (<10%)	Q6ZNF0	Acid phosphatase type 7 (EC 3.1.3.2) (Purple acid phosphatase long form)	NA	hit, no GO BP
GN004971	Chromosome_1A	480	1	21	41.25	1.0597140454163163	0.7017543859649122	21	0	0.7017543859649122	21	0	NA	NA	NA	0.7121057985757884	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004972	Chromosome_1A	1236	1	57	42.47572815533981	1.0226144511858797	0.23001725129384704	57	0	0.23001725129384704	57	0	NA	NA	NA	1.3600816048962938	63	0	unmethylated (<10%)	Q19AE6	Neuronal acetylcholine receptor subunit alpha-4	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; cognition [GO:0050890]; DNA repair [GO:0006281]; nervous system process [GO:0050877]; response to hypoxia [GO:0001666]; response to oxidative stress [GO:0006979]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN004973	Chromosome_1A	52854	16	952	35.19695765694176	0.5815828617034617	38.61908456167572	852	0.3884976525821596	71.77134791813691	27	0.8518518518518519	37.54405235937571	825	0.37333333333333335	81.05413105413105	18	0.9444444444444444	sparse (10-50%)	A9BJC1	Mannosylglucosyl-3-phosphoglycerate phosphatase (MGPG phosphatase) (EC 3.1.3.-)	nucleotide catabolic process [GO:0009166]	hit with GO BP
GN004974	Chromosome_1A	204	1	4	48.529411764705884	0.3388704318936877	97.01492537313433	4	1	97.01492537313433	4	1	NA	NA	NA	90.29680365296804	16	1	NA	P41123	Large ribosomal subunit protein eL13 (60S ribosomal protein L13)	bone development [GO:0060348]; cytoplasmic translation [GO:0002181]; liver regeneration [GO:0097421]; translation [GO:0006412]	hit with GO BP
GN004975	Chromosome_1A	16875	6	118	34.802962962962965	0.23205872831001112	83.04273084479371	118	0.9067796610169492	83.92745465916198	25	0.96	82.82658517952636	93	0.8924731182795699	0.5170316301703163	45	0	methylated (>=50%)	A0JPN4	Endoribonuclease ZC3H12A (EC 3.1.-.-) (Monocyte chemotactic protein-induced protein 1) (MCP-induced protein 1) (MCPIP-1) (Regnase-1) (Reg1) (Zinc finger CCCH domain-containing protein 12A)	3'-UTR-mediated mRNA destabilization [GO:0061158]; cellular response to chemokine [GO:1990869]; cellular response to glucose starvation [GO:0042149]; cellular response to ionomycin [GO:1904637]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to oxidative stress [GO:0034599]; cellular response to sodium arsenite [GO:1903936]; cellular response to tumor necrosis factor [GO:0071356]; cellular response to virus [GO:0098586]; DNA damage response [GO:0006974]; host-mediated suppression of viral genome replication [GO:0044828]; immune response-activating signaling pathway [GO:0002757]; miRNA catabolic process [GO:0010587]; mRNA catabolic process [GO:0006402]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cardiac muscle contraction [GO:0055118]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of gene expression [GO:0010629]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of macrophage activation [GO:0043031]; negative regulation of muscle cell apoptotic process [GO:0010656]; negative regulation of nitric oxide biosynthetic process [GO:0045019]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of protein phosphorylation [GO:0001933]; negative regulation of T-helper 17 cell differentiation [GO:2000320]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of tumor necrosis factor production [GO:0032720]; negative regulation of type II interferon production [GO:0032689]; positive regulation of angiogenesis [GO:0045766]; positive regulation of autophagy [GO:0010508]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of gene expression [GO:0010628]; positive regulation of lipid storage [GO:0010884]; positive regulation of miRNA catabolic process [GO:2000627]; positive regulation of mRNA catabolic process [GO:0061014]; positive regulation of p38MAPK cascade [GO:1900745]; positive regulation of protein deubiquitination [GO:1903003]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein complex oligomerization [GO:0051259]; protein deubiquitination [GO:0016579]; regulation of gene expression [GO:0010468]; T cell receptor signaling pathway [GO:0050852]	hit with GO BP
GN004976	Chromosome_1A	2451	1	37	42.83965728274174	0.3325412802657778	95.60530679933665	37	1	95.60530679933665	37	1	NA	NA	NA	90	18	1	methylated (>=50%)	Q8BJ64	Choline dehydrogenase, mitochondrial (CDH) (CHD) (EC 1.1.99.1)	glycine betaine biosynthetic process from choline [GO:0019285]	hit with GO BP
GN004977	Chromosome_1A	2036	3	22	35.80550098231827	0.34018379281537175	96.30891538898354	22	1	97.87985865724382	6	1	96.00811907983761	16	1	88.88888888888889	26	1	methylated (>=50%)	Q8XIY6	Putative pyrophosphatase PpaX (EC 3.6.1.1)	DNA repair [GO:0006281]	hit with GO BP
GN004978	Chromosome_1A	51072	34	509	34.16353383458647	0.34647626296912826	68.24523779487826	503	0.8369781312127237	77.759009009009	64	0.875	67.30870493029958	439	0.8314350797266514	78.33840800347977	44	0.75	methylated (>=50%)	P97608	5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase) (5-OPase) (Pyroglutamase)	NA	hit, no GO BP
GN004979	Chromosome_1A	4250	4	122	34.188235294117646	0.9841099925598628	0.9105450965916082	122	0	0.9477311889718553	63	0	0.8826695371367062	59	0	1.9230769230769231	52	0	unmethylated (<10%)	P54269	Homeobox protein caupolican	cell development [GO:0048468]; compound eye morphogenesis [GO:0001745]; equator specification [GO:0045317]; imaginal disc-derived wing vein specification [GO:0007474]; muscle cell fate commitment [GO:0042693]; negative regulation of growth [GO:0045926]; neuron differentiation [GO:0030182]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of mitotic cell cycle [GO:0007346]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004980	Chromosome_1A	381	1	1	48.818897637795274	0.04618741665656443	0	1	0	0	1	0	NA	NA	NA	0.7034431691965939	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004981	Chromosome_1A	972	1	16	36.72839506172839	0.491809499715388	0.8403361344537815	6	0	0.8403361344537815	6	0	NA	NA	NA	0.794044665012407	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004982	Chromosome_1A	2459	3	104	43.14762098413989	0.9088376192303865	0.4725554343874955	104	0	0.5244050020169423	96	0	0	8	0	0.4341164453524004	54	0	unmethylated (<10%)	P86952	Tyrosinase-like protein (Tyrosinase-2)	NA	hit, no GO BP
GN004983	Chromosome_1A	4822	3	60	36.623807548734966	0.3710943512390334	84.43557582668187	60	0.9666666666666667	89.35264054514481	25	1	81.96229648671807	35	0.9428571428571428	71.00213219616205	18	0.8333333333333334	methylated (>=50%)	O43313	ATM interactor (ATM/ATR-substrate CHK2-interacting zinc finger protein) (ASCIZ) (Zinc finger protein 822)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN004984	Chromosome_1A	3327	8	28	32.16110610159303	0.32906965653910963	59.22671353251318	28	0.5	41.358024691358025	15	0.26666666666666666	70.16052880075543	13	0.7692307692307693	10.278250993753549	32	0	methylated (>=50%)	Q68ED3	Terminal nucleotidyltransferase 4B (Non-canonical poly(A) RNA polymerase PAPD5) (EC 2.7.7.19) (PAP-associated domain-containing protein 5) (Terminal guanylyltransferase) (EC 2.7.7.-) (Terminal uridylyltransferase 3) (TUTase 3) (Topoisomerase-related function protein 4-2) (TRF4-2)	carbohydrate homeostasis [GO:0033500]; histone mRNA catabolic process [GO:0071044]; miRNA catabolic process [GO:0010587]; mRNA 3'-end processing [GO:0031124]; negative regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060212]; negative regulation of telomere maintenance via telomerase [GO:0032211]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; polyadenylation-dependent ncRNA catabolic process [GO:0043634]; positive regulation of 3'-UTR-mediated mRNA stabilization [GO:1905870]; RNA 3'-end processing [GO:0031123]	hit with GO BP
GN004985	Chromosome_1A	2580	3	47	36.395348837209305	0.5504962001870398	93.68849677638276	47	1	95.20624303233	16	1	93.02439024390245	31	1	91.77464788732394	57	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004986	Chromosome_1A	6516	5	102	36.41804788213628	0.4726103960748062	90.54441260744986	102	1	93.59267734553775	18	1	90.05177514792899	84	1	82.07094918504315	48	0.9791666666666666	methylated (>=50%)	Q8TB40	(Lyso)-N-acylphosphatidylethanolamine lipase (EC 3.1.1.-) (Alpha/beta hydrolase domain-containing protein 4) (Abhydrolase domain-containing protein 4) (Alpha/beta-hydrolase 4)	N-acylphosphatidylethanolamine metabolic process [GO:0070292]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylethanolamine acyl-chain remodeling [GO:0036152]	hit with GO BP
GN004987	Chromosome_1A	4424	4	36	31.21609403254973	0.33562189432158707	37.092544023979016	36	0.4444444444444444	57.59493670886076	12	0.6666666666666666	30.731467844869908	24	0.3333333333333333	46.80156657963447	49	0.42857142857142855	sparse (10-50%)	P24367	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)	negative regulation of collagen fibril organization [GO:1904027]; protein folding [GO:0006457]	hit with GO BP
GN004988	Chromosome_1A	2380	3	45	37.73109243697479	0.5328994506806783	89.03871248368856	45	0.9555555555555556	82.46153846153847	6	0.8333333333333334	90.12158054711246	39	0.9743589743589743	92.10526315789474	40	1	methylated (>=50%)	P24369	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (CYP-S1) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)	bone development [GO:0060348]; host-mediated activation of viral genome replication [GO:0044829]; host-mediated activation of viral process [GO:0044794]; neutrophil chemotaxis [GO:0030593]; positive regulation of multicellular organism growth [GO:0040018]; protein folding [GO:0006457]; protein stabilization [GO:0050821]	hit with GO BP
GN004989	Chromosome_1A	2924	2	22	34.61012311901505	0.2562919580071316	66.53248993674525	22	0.7272727272727273	79.0224032586558	8	0.875	61.618589743589745	14	0.6428571428571429	54.7112462006079	65	0.676923076923077	methylated (>=50%)	Q8C190	VPS9 domain-containing protein 1 (5-day ovary-specific transcript 1 protein)	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN004990	Chromosome_1A	477	1	14	40.670859538784065	0.7124719940253921	83.64779874213836	14	1	83.64779874213836	14	1	NA	NA	NA	78.60116569525395	17	0.9411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN004991	Chromosome_1A	213	1	4	45.070422535211264	0.37384817902588857	84.94208494208495	4	0.75	84.94208494208495	4	0.75	NA	NA	NA	83.86336866902238	14	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN004992	Chromosome_1A	264	1	5	53.40909090909091	0.3055555555555556	0.3502626970227671	5	0	0.3502626970227671	5	0	NA	NA	NA	0.7612456747404844	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002360	Chromosome_1A	53987	27	659	34.21934910256173	0.41892014000619454	78.55284438506435	625	0.848	89.01713885974117	57	0.9824561403508771	77.80122600743644	568	0.8345070422535211	38.82224645583424	15	0.2	methylated (>=50%)	Q924N4	Solute carrier family 12 member 6 (Electroneutral potassium-chloride cotransporter 3) (K-Cl cotransporter 3)	cell volume homeostasis [GO:0006884]; cellular hypotonic response [GO:0071476]; cellular hypotonic salinity response [GO:0071477]; cellular response to glucose stimulus [GO:0071333]; chloride ion homeostasis [GO:0055064]; chloride transport [GO:0006821]; monoatomic ion transport [GO:0006811]; potassium ion homeostasis [GO:0055075]; potassium ion import across plasma membrane [GO:1990573]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN002359	Chromosome_1A	2451	5	44	42.35006119951041	0.41011404733021245	78.79032258064517	42	0.9047619047619048	79.45670628183362	41	0.9024390243902439	66.12903225806451	1	1	61.40988372093023	20	0.7	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002358	Chromosome_1A	12327	5	177	34.704307617425165	0.47756480970766685	82.92307692307692	171	0.9005847953216374	28.365384615384617	4	0.5	84.03649921507065	167	0.9101796407185628	49.29667519181586	67	0.47761194029850745	methylated (>=50%)	Q5J8M3	ER membrane protein complex subunit 4 (Cell proliferation-inducing gene 17 protein) (Transmembrane protein 85)	protein insertion into ER membrane by stop-transfer membrane-anchor sequence [GO:0045050]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN002357	Chromosome_1A	381	1	7	48.818897637795274	0.3092532467532468	98.29931972789116	7	1	98.29931972789116	7	1	NA	NA	NA	94.42409442409442	32	0.96875	methylated (>=50%)	G3V9R8	Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP core protein C)	3'-UTR-mediated mRNA stabilization [GO:0070935]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of mRNA modification [GO:0090367]; negative regulation of telomere maintenance via telomerase [GO:0032211]	hit with GO BP
GN002356	Chromosome_1A	7799	6	105	35.222464418515194	0.4351954006861982	89.95238877031686	95	0.9157894736842105	96.93877551020408	2	1	89.8381445019189	93	0.9139784946236559	93.75193318898856	38	0.9736842105263158	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002355	Chromosome_1A	411	1	22	49.63503649635037	0.8691723541286167	95.58823529411765	10	1	95.58823529411765	10	1	NA	NA	NA	86.199342825848845	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002354	Chromosome_1A	992	2	45	43.95161290322581	0.9421696918531026	87.95811518324608	14	1	87.95811518324608	14	1	NA	NA	NA	86.03859250851305	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002353	Chromosome_1A	1074	1	19	42.83054003724395	0.3886857142857143	88.17204301075269	19	1	88.17204301075269	19	1	NA	NA	NA	47.07846410684474	17	0.4117647058823529	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002352	Chromosome_1A	9688	4	131	35.910404624277454	0.41982429363168616	80.44692737430168	129	0.9069767441860465	57.95918367346939	5	0.6	81.2235692134198	124	0.9193548387096774	86.79577464788733	44	1	methylated (>=50%)	Q92499	ATP-dependent RNA helicase DDX1 (EC 3.6.4.13) (DEAD box protein 1) (DEAD box protein retinoblastoma) (DBP-RB)	double-strand break repair [GO:0006302]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; protein localization to cytoplasmic stress granule [GO:1903608]; regulation of translational initiation [GO:0006446]; spliceosomal complex assembly [GO:0000245]; tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]	hit with GO BP
GN002351	Chromosome_1A	456	1	22	53.728070175438596	0.6688	4.411764705882353	4	0	4.411764705882353	4	0	NA	NA	NA	1.2125079770261646	63	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002347	Chromosome_1A	252	1	6	44.44444444444444	0.525	0	6	0	0	6	0	NA	NA	NA	1.6709511568123394	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002346	Chromosome_1A	9468	2	260	37.19898605830165	0.7939056754864433	1.1930983847283407	236	0	0.37919826652221017	33	0	1.3591160220994476	203	0	0.7890222984562607	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004997	Chromosome_1A	3589	5	24	35.553078852047925	0.21170138248847925	69.548584544759	24	0.875	66.41509433962264	14	0.8571428571428571	71.68597168597168	10	0.9	74.7172859450727	18	0.9444444444444444	methylated (>=50%)	Q96RK4	BBSome complex member BBS4 (Bardet-Biedl syndrome 4 protein)	adult behavior [GO:0030534]; brain morphogenesis [GO:0048854]; centrosome cycle [GO:0007098]; cerebral cortex development [GO:0021987]; cilium assembly [GO:0060271]; dendrite development [GO:0016358]; fat cell differentiation [GO:0045444]; heart looping [GO:0001947]; hippocampus development [GO:0021766]; maintenance of protein location in nucleus [GO:0051457]; melanosome transport [GO:0032402]; microtubule anchoring at centrosome [GO:0034454]; microtubule cytoskeleton organization [GO:0000226]; mitotic cytokinesis [GO:0000281]; negative regulation of appetite by leptin-mediated signaling pathway [GO:0038108]; neural tube closure [GO:0001843]; non-motile cilium assembly [GO:1905515]; photoreceptor cell maintenance [GO:0045494]; positive regulation of cilium assembly [GO:0045724]; protein localization to centrosome [GO:0071539]; protein localization to cilium [GO:0061512]; regulation of cilium beat frequency involved in ciliary motility [GO:0060296]; regulation of cytokinesis [GO:0032465]; regulation of lipid metabolic process [GO:0019216]; retina homeostasis [GO:0001895]; retinal rod cell development [GO:0046548]; sensory perception of smell [GO:0007608]; sensory processing [GO:0050893]; spermatid development [GO:0007286]; striatum development [GO:0021756]	hit with GO BP
GN004998	Chromosome_1A	5318	5	50	38.45430613012411	0.2556116318192742	75.86719524281467	46	0.8260869565217391	81.09684947491249	21	0.9047619047619048	72.00689061154178	25	0.76	41.16504854368932	7	0.2857142857142857	methylated (>=50%)	Q9Y236	Oxidative stress-induced growth inhibitor 2 (hT41)	negative regulation of cell growth [GO:0030308]	hit with GO BP
GN004999	Chromosome_1A	19619	4	303	35.53697945868801	0.489175898955472	82.15337681464338	303	0.933993399339934	34.6031746031746	6	0.16666666666666666	82.95448467668609	297	0.9494949494949495	85.75112830431979	25	0.92	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005000	Chromosome_1A	8931	4	91	36.35651102900011	0.30926398063868005	91.55537291966304	89	0.9887640449438202	93.21394910461828	23	1	91.09301103520757	66	0.9848484848484849	93.2194046306505	23	1	methylated (>=50%)	Q8SW43	Zinc finger C2H2 protein ECU03_0790	NA	hit, no GO BP
GN005001	Chromosome_1A	31158	24	448	37.191090570639965	0.41597548177122173	92.62382351688599	338	0.9940828402366864	92.74809160305344	88	1	92.58812565100598	250	0.992	96.73423423423424	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005002	Chromosome_1A	327	1	12	42.20183486238532	0.8499025341130604	0.9036144578313253	12	0	0.9036144578313253	12	0	NA	NA	NA	1.049618320610687	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005003	Chromosome_1A	591	1	25	42.978003384094755	0.9418026517083121	0.7429420505200595	25	0	0.7429420505200595	25	0	NA	NA	NA	0.3029155622870125	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005004	Chromosome_1A	3996	5	146	38.93893893893894	0.9681967539579807	1.8085650912813513	141	0	0.2245508982035928	32	0	2.276243093922652	109	0	0.71698113207547165	53	0	unmethylated (<10%)	Q9MYX0	Sodium-dependent serotonin transporter (SERT) (5HT transporter) (5HTT) (Solute carrier family 6 member 4)	amino acid transport [GO:0006865]; brain morphogenesis [GO:0048854]; enteric nervous system development [GO:0048484]; membrane depolarization [GO:0051899]; negative regulation of organ growth [GO:0046621]; platelet aggregation [GO:0070527]; positive regulation of cell cycle [GO:0045787]; positive regulation of gene expression [GO:0010628]; regulation of thalamus size [GO:0090067]; response to toxic substance [GO:0009636]; serotonin uptake [GO:0051610]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN005005	Chromosome_1A	934	5	22	35.54603854389722	0.745681521265786	0.2863278453829635	22	0	0.28763183125599234	17	0	0.2824858757062147	5	0	2.29328165374677	71	0	unmethylated (<10%)	P27922	Sodium-dependent dopamine transporter (DA transporter) (DAT) (Solute carrier family 6 member 3)	amino acid transport [GO:0006865]; hyaloid vascular plexus regression [GO:1990384]; neurotransmitter transport [GO:0006836]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN005006	Chromosome_1A	366	1	23	48.36065573770492	1.09666492965086	0.4754358161648177	23	0	0.4754358161648177	23	0	NA	NA	NA	0.3597122302158273	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005007	Chromosome_1A	11713	11	315	35.294117647058826	0.865804568570801	0.6147422142318621	314	0	0.6330783434450014	97	0	0.6095747844186739	217	0	1.5182601559294213	46	0	unmethylated (<10%)	O88576	Sodium-dependent neutral amino acid transporter B(0)AT3 (Sodium- and chloride-dependent transporter XTRP2) (Solute carrier family 6 member 18) (System B(0) neutral amino acid transporter AT3)	amino acid transmembrane transport [GO:0003333]; amino acid transport [GO:0006865]; neutral amino acid transport [GO:0015804]; renal amino acid absorption [GO:1990297]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN005008	Chromosome_1A	1409	3	35	36.550745209368344	0.7464505191777919	0.5081874647092038	34	0	0.36798528058877644	25	0	0.7309941520467836	9	0	0.3317360855141909	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005009	Chromosome_1A	612	1	13	43.790849673202615	0.4450909090909091	2.42914979757085	13	0	2.42914979757085	13	0	NA	NA	NA	1.7482517482517483	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005010	Chromosome_1A	1871	4	75	43.773383217530736	0.8378612371626463	0.7082152974504249	74	0	0.7686932215234102	58	0	0.5822416302765647	16	0	0.5138516532618409	60	0	unmethylated (<10%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN005011	Chromosome_1A	2733	5	26	36.223929747530185	0.2907446808510638	76.1996161228407	26	0.9615384615384616	69.56521739130434	12	0.9166666666666666	80.06072874493927	14	1	44.64464464464464	18	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005012	Chromosome_1A	10315	15	91	38.19680077556956	0.24500733587720308	50.987292277614856	91	0.5274725274725275	53.11493018259936	45	0.5111111111111111	49.769443590531814	46	0.5434782608695652	62.01550387596899	15	0.8	methylated (>=50%)	Q04164	Putative epidermal cell surface receptor (Stranded at second protein)	axon guidance [GO:0007411]; cell adhesion [GO:0007155]; cell-cell signaling via exosome [GO:0099156]; instar larval development [GO:0002168]; positive regulation of cell differentiation [GO:0045597]	hit with GO BP
GN005013	Chromosome_1A	1282	4	10	39.54758190327613	0.20107911412259238	45.97402597402598	10	0.4	48.13278008298755	7	0.5714285714285714	42.361111111111114	3	0	43.54275741710297	18	0.3888888888888889	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005014	Chromosome_1A	579	1	34	45.59585492227979	1.1298857831601905	0.335946248600224	34	0	0.335946248600224	34	0	NA	NA	NA	0.4162330905306972	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002336	Chromosome_1A	1216	5	30	37.41776315789474	0.7049275362318841	0.5984440454817475	30	0	0.6739679865206403	21	0	0.4132231404958678	9	0	0.6951871657754011	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002335	Chromosome_1A	24776	14	230	34.50113012592832	0.31282828282828284	78.69900771775083	228	0.8508771929824561	66.04477611940298	18	0.7222222222222222	79.49378954769159	210	0.861904761904762	38.45553822152886	32	0.5625	methylated (>=50%)	Q32KJ6	N-acetylgalactosamine-6-sulfatase (EC 3.1.6.4) (Chondroitinsulfatase) (Chondroitinase) (Galactose-6-sulfate sulfatase) (N-acetylgalactosamine-6-sulfate sulfatase) (GalNAc6S sulfatase)	chondroitin sulfate proteoglycan catabolic process [GO:0030207]	hit with GO BP
GN005016	Chromosome_1A	25849	11	210	33.722774575418775	0.28592896930431005	82.82945047127868	206	0.941747572815534	86.60317460317461	33	0.9696969696969697	82.21486919656705	173	0.9364161849710982	90.7258064516129	23	1	methylated (>=50%)	Q9BYN7	Zinc finger protein 341	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN005017	Chromosome_1A	954	1	1	43.291404612159326	0.02385596399099775	0	1	0	0	1	0	NA	NA	NA	0.36496350364963503	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002333	Chromosome_1A	1526	4	43	35.77981651376147	0.8805421363392378	0.6529209621993127	43	0	0.7130124777183601	27	0	0.5704971475142624	16	0	0.7683863885839737	57	0	unmethylated (<10%)	P55041	GTP-binding protein GEM (GTP-binding mitogen-induced T-cell protein) (RAS-like protein KIR)	chromosome organization [GO:0051276]; metaphase chromosome alignment [GO:0051310]; mitotic cell cycle [GO:0000278]	hit with GO BP
GN002332	Chromosome_1A	771	1	19	41.11543450064851	0.6306069737408524	0.7518796992481203	19	0	0.7518796992481203	19	0	NA	NA	NA	0.5016722408026756	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005019	Chromosome_1A	6150	3	150	38.048780487804876	0.6739302589937728	1.26883425852498	150	0	0.5167958656330749	49	0	1.5135589657347068	101	0	5.453484981044036	47	0	unmethylated (<10%)	Q52556	Linear primary-alkylsulfatase (EC 3.1.6.21) (SDSase) (Type III linear primary-alkylsulfatase)	dodecyl sulfate metabolic process [GO:0018909]	hit with GO BP
GN005020	Chromosome_1A	402	1	10	42.039800995024876	0.567476002258611	NA	0	NA	NA	NA	NA	NA	NA	NA	0	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005021	Chromosome_1A	1338	1	41	38.191330343796714	0.8475157582499073	0.4664179104477612	29	0	0.4664179104477612	29	0	NA	NA	NA	0.4959938954597482	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005022	Chromosome_1A	1272	1	46	39.07232704402516	0.9478390461997019	0.9047824213700991	46	0	0.9047824213700991	46	0	NA	NA	NA	0.666207213416035	138	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005023	Chromosome_1A	10507	10	265	35.671457123822215	0.7945130233301374	1.0587238848108413	265	0	0.6501950585175552	44	0	1.1381839642525926	221	0	0.8019008019008019	62	0	unmethylated (<10%)	O73853	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN002323	Chromosome_1A	276	1	17	54.34782608695652	0.8365127473702977	0	10	0	0	10	0	NA	NA	NA	0.3675242231874373	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002322	Chromosome_1A	255	1	12	48.23529411764706	0.8181818181818182	0.8658008658008658	12	0	0.8658008658008658	12	0	NA	NA	NA	0.357355568790947	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002363	Chromosome_1A	478	1	14	40.58577405857741	0.714957264957265	15.203761755485893	14	0	15.203761755485893	14	0	NA	NA	NA	1.529497450837582	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018302	Chromosome_1A	3048	4	26	35.958005249343834	0.2667788793321102	33.111954459203034	26	0	36.8421052631579	9	0	31.643895989422653	17	0	33.840090090090094	20	0.05	sparse (10-50%)	Q5F4A1	G2/M phase-specific E3 ubiquitin-protein ligase (EC 2.3.2.26) (G2/M phase-specific HECT-type E3 ubiquitin transferase)	heterochromatin formation [GO:0031507]; pericentric heterochromatin formation [GO:0031508]; protein localization to chromosome [GO:0034502]; protein localization to condensed nuclear chromosome [GO:1903084]; protein ubiquitination [GO:0016567]	hit with GO BP
GN012806	Chromosome_1A	288	1	6	42.013888888888886	0.5008695652173913	43.20987654320987	6	0	43.20987654320987	6	0	NA	NA	NA	33.16162266580811	18	0.05555555555555555	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002320	Chromosome_1A	906	1	19	39.29359823399559	0.5489158163265306	31.62677976370797	19	0	31.62677976370797	19	0	NA	NA	NA	26.218001651527665	40	0.075	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002321	Chromosome_1A	37727	35	459	35.40700294218994	0.3900869043970536	83.50934440818749	456	0.9517543859649122	92.13680210464777	62	1	82.5349136650269	394	0.9441624365482234	4.948729380294249	27	0	methylated (>=50%)	Q68CZ1	Protein fantom (Nephrocystin-8) (RPGR-interacting protein 1-like protein) (RPGRIP1-like protein)	negative regulation of G protein-coupled receptor signaling pathway [GO:0045744]; non-motile cilium assembly [GO:1905515]; protein localization to ciliary transition zone [GO:1904491]; retinal rod cell development [GO:0046548]	hit with GO BP
GN005025	Chromosome_1A	39311	11	575	33.79206837780774	0.5138802157858932	84.82673210558906	570	0.9087719298245615	61.82987848463188	24	0.6666666666666666	85.589043692541	546	0.9194139194139194	0.7615700058582309	40	0	methylated (>=50%)	P30684	Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein)	adenylate cyclase-activating dopamine receptor signaling pathway [GO:0007191]; sensory perception of chemical stimulus [GO:0007606]	hit with GO BP
GN002319	Chromosome_1A	5481	6	86	36.307243203794926	0.4787633728742805	80.0593975392448	86	0.9883720930232558	96.4546402502607	18	1	77.4869109947644	68	0.9852941176470589	83.97699260476581	40	0.9	methylated (>=50%)	P30664	DNA replication licensing factor mcm4-B (EC 3.6.4.12) (CDC21 homolog-B) (Minichromosome maintenance protein 4-B) (xMCM4-B) (P1-CDC21-B)	cell cycle DNA replication [GO:0044786]; DNA strand elongation involved in DNA replication [GO:0006271]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication initiation [GO:1902975]; premeiotic DNA replication [GO:0006279]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN002318	Chromosome_1A	917	3	18	42.093784078516904	0.44409169177787344	95.50561797752809	18	1	95.35283993115318	17	1	97.61904761904762	1	1	95.74468085106383	27	1	methylated (>=50%)	Q5XK83	DNA replication licensing factor mcm4-A (EC 3.6.4.12) (CDC21 homolog-A) (Minichromosome maintenance protein 4-A) (xMCM4-A) (P1-CDC21-A) (p98)	cell cycle DNA replication [GO:0044786]; DNA strand elongation involved in DNA replication [GO:0006271]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication initiation [GO:1902975]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN002317	Chromosome_1A	8373	4	153	37.286516182969066	0.5257356516985764	82.97297297297297	153	0.9215686274509803	59.81941309255079	21	0.6190476190476191	85.53915436577434	132	0.9696969696969697	42.49786871270247	44	0.5	methylated (>=50%)	Q8R3F5	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (MCT) (EC 2.3.1.39) (Mitochondrial malonyltransferase) ([Acyl-carrier-protein] malonyltransferase)	fatty acid biosynthetic process [GO:0006633]; mitochondrial small ribosomal subunit assembly [GO:0180026]	hit with GO BP
GN005028	Chromosome_1A	37448	23	408	34.429074983977785	0.3677991625933118	83.80991034202856	403	0.9652605459057072	86.75650557620818	47	1	83.55576930784338	356	0.9606741573033708	90.56444818871104	25	1	methylated (>=50%)	Q4V8B3	Mediator of RNA polymerase II transcription subunit 24 (Mediator complex subunit 24) (Thyroid hormone receptor-associated protein 4)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; protein ubiquitination [GO:0016567]; stem cell population maintenance [GO:0019827]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN002315	Chromosome_1A	693	1	31	46.03174603174603	0.8703208556149733	0.8071748878923767	31	0	0.8071748878923767	31	0	NA	NA	NA	0.7309941520467836	47	0	unmethylated (<10%)	B3EWY7	Acidic skeletal organic matrix protein (Acidic SOMP)	NA	hit, no GO BP
GN002314	Chromosome_1A	714	1	33	47.19887955182073	0.8463362068965518	0.3271537622682661	33	0	0.3271537622682661	33	0	NA	NA	NA	0.6278026905829597	36	0	unmethylated (<10%)	B3EWY6	Skeletal aspartic acid-rich protein 1	NA	hit, no GO BP
GN005030	Chromosome_1A	1398	2	69	45.20743919885551	0.9753981495525558	0.5754475703324808	68	0	0.6040268456375839	66	0	0	2	0	0.6506180871828237	59	0	unmethylated (<10%)	Q9BWW7	Transcriptional repressor scratch 1 (Scratch homolog 1 zinc finger protein) (SCRT) (Scratch 1) (hScrt)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN005031	Chromosome_1A	10792	5	285	35.535581912527796	0.8371233214503258	0.7395740601246319	283	0	0.8433734939759037	55	0	0.7182366053000908	228	0	0.6808896958692692	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005032	Chromosome_1A	552	1	5	39.31159420289855	0.24312896405919662	0.5602240896358543	5	0	0.5602240896358543	5	0	NA	NA	NA	4.965156794425087	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002311	Chromosome_1A	5498	4	121	33.59403419425246	0.7803869217991911	1.3928329952670724	117	0	0.5813953488372093	12	0	1.4996174445294568	105	0	0.9523809523809523	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002310	Chromosome_1A	213	1	12	48.35680751173709	0.9748283752860412	0.5194805194805194	12	0	0.5194805194805194	12	0	NA	NA	NA	0.6577455205261964	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005034	Chromosome_1A	1621	5	40	40.46884639111659	0.6037918575632286	0.4065040650406504	27	0	0.28901734104046245	26	0	2.1739130434782608	1	0	0.4318721658389117	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005035	Chromosome_1A	177	1	2	50.282485875706215	0.22125	81.98198198198199	2	1	81.98198198198199	2	1	NA	NA	NA	77.59067357512953	15	0.8666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN005036	Chromosome_1A	1625	2	30	37.292307692307695	0.5310862484067412	82.88227334235454	30	0.9666666666666667	83.125	10	0.9	82.81519861830742	20	1	71.83967112024666	31	0.8064516129032258	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005037	Chromosome_1A	321	1	8	46.41744548286604	0.46741900254823443	37.11790393013101	8	0.375	37.11790393013101	8	0.375	NA	NA	NA	69.7452229299363	24	0.7083333333333334	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005038	Chromosome_1A	11031	6	101	33.333333333333336	0.32978457002806094	93.68502715283165	100	0.99	96.23188405797102	27	1	93.19778188539742	73	0.9863013698630136	95.83085169743894	25	1	methylated (>=50%)	Q9W345	Palmitoyltransferase ZDHHC8 (EC 2.3.1.225) (Zinc finger DHHC domain-containing protein 8) (Zinc finger DHHC-type containing 8)	NA	hit, no GO BP
GN005039	Chromosome_1A	4985	8	65	36.54964894684052	0.391608383156821	93.69722557297949	65	1	95.64755838641189	22	1	92.92333614153328	43	1	69.0748898678414	12	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005040	Chromosome_1A	1522	3	35	43.23258869908016	0.4923654244306418	43.458781362007166	35	0.4857142857142857	45.41198501872659	33	0.5151515151515151	0	2	0	14.781834372217276	32	0.125	sparse (10-50%)	Q9R1S4	X-box-binding protein 1 (Hepatocarcinogenesis-related transcription factor) (HTF) [Cleaved into: X-box-binding protein 1, cytoplasmic form; X-box-binding protein 1, luminal form]	adipose tissue development [GO:0060612]; angiogenesis [GO:0001525]; cellular response to amino acid stimulus [GO:0071230]; cellular response to antibiotic [GO:0071236]; cellular response to fluid shear stress [GO:0071498]; cellular response to fructose stimulus [GO:0071332]; cellular response to glucose starvation [GO:0042149]; cellular response to glucose stimulus [GO:0071333]; cellular response to insulin stimulus [GO:0032869]; cellular response to interleukin-4 [GO:0071353]; cellular response to laminar fluid shear stress [GO:0071499]; cellular response to leukemia inhibitory factor [GO:1990830]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to nutrient [GO:0031670]; cellular response to oxidative stress [GO:0034599]; cellular response to peptide hormone stimulus [GO:0071375]; cellular response to vascular endothelial growth factor stimulus [GO:0035924]; cholesterol homeostasis [GO:0042632]; endoplasmic reticulum unfolded protein response [GO:0030968]; endothelial cell proliferation [GO:0001935]; epithelial cell maturation [GO:0002070]; epithelial cell maturation involved in salivary gland development [GO:0060691]; exocrine pancreas development [GO:0031017]; fatty acid homeostasis [GO:0055089]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; IRE1-mediated unfolded protein response [GO:0036498]; liver development [GO:0001889]; negative regulation of apoptotic process [GO:0043066]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of endoplasmic reticulum unfolded protein response [GO:1900102]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of myotube differentiation [GO:0010832]; negative regulation of SMAD protein signal transduction [GO:0060392]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; neuron development [GO:0048666]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of angiogenesis [GO:0045766]; positive regulation of autophagy [GO:0010508]; positive regulation of B cell differentiation [GO:0045579]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of endothelial cell apoptotic process [GO:2000353]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of hepatocyte proliferation [GO:2000347]; positive regulation of immunoglobulin production [GO:0002639]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of lactation [GO:1903489]; positive regulation of MHC class II biosynthetic process [GO:0045348]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of plasma cell differentiation [GO:1900100]; positive regulation of proteasomal protein catabolic process [GO:1901800]; positive regulation of protein acetylation [GO:1901985]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of T cell differentiation [GO:0045582]; positive regulation of TOR signaling [GO:0032008]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; positive regulation of vascular wound healing [GO:0035470]; protein destabilization [GO:0031648]; regulation of autophagy [GO:0010506]; regulation of cell growth [GO:0001558]; regulation of DNA-templated transcription [GO:0006355]; regulation of protein stability [GO:0031647]; regulation of transcription by RNA polymerase II [GO:0006357]; response to electrical stimulus [GO:0051602]; response to endoplasmic reticulum stress [GO:0034976]; response to insulin-like growth factor stimulus [GO:1990418]; response to nutrient [GO:0007584]; response to xenobiotic stimulus [GO:0009410]; serotonin secretion, neurotransmission [GO:0060096]; sterol homeostasis [GO:0055092]; transcription by RNA polymerase II [GO:0006366]; ubiquitin-dependent protein catabolic process [GO:0006511]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]	hit with GO BP
GN005041	Chromosome_1A	14760	10	117	35.15582655826558	0.2570376813561502	84.33853507662027	117	0.9316239316239316	88.54961832061069	16	1	83.81539434171013	101	0.9207920792079208	52.71232876712329	39	0.4358974358974359	methylated (>=50%)	Q2KIY5	Putative aminopeptidase PLBD2 (EC 3.4.11.-) (LAMA-like protein 2) (Lamina ancestor homolog 2) (Phospholipase B domain-containing protein 2) [Cleaved into: Putative aminopeptidase PLBD2 chain A; Putative aminopeptidase PLBD2 chain B]	NA	hit, no GO BP
GN002302	Chromosome_1A	38781	43	430	37.05680616796885	0.3264642922418482	91.52576328231429	424	0.9882075471698113	94.02611339653014	115	1	90.80394485464966	309	0.9838187702265372	82.72033310201249	16	1	methylated (>=50%)	O14578	Citron Rho-interacting kinase (CRIK) (EC 2.7.11.1) (Serine/threonine-protein kinase 21)	generation of neurons [GO:0048699]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; negative regulation of hippo signaling [GO:0035331]; positive regulation of cytokinesis [GO:0032467]; regulation of actin cytoskeleton organization [GO:0032956]	hit with GO BP
GN002301	Chromosome_1A	735	1	9	41.7687074829932	0.2900552486187845	41.08527131782946	9	0.5555555555555556	41.08527131782946	9	0.5555555555555556	NA	NA	NA	0.4319654427645788	45	0	sparse (10-50%)	D3ZL52	Sesquipedalian-1 (Ses1) (27 kDa inositol polyphosphate phosphatase interacting protein A) (IPIP27A) (PH domain-containing endocytic trafficking adaptor 1)	endosome organization [GO:0007032]; receptor recycling [GO:0001881]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN002299	Chromosome_1A	1141	3	1	41.27957931638913	0.02989415216935653	100	1	1	100	1	1	NA	NA	NA	96.09905020352781	41	1	NA	NA	NA	NA	no Swiss-Prot hit
GN002298	Chromosome_1A	10199	9	309	37.16050593195411	0.8781655079901726	0.7892353473929357	308	0	0.4754937820043892	149	0	0.960960960960961	159	0	0.5467326217130956	61	0	unmethylated (<10%)	Q8C8H8	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN005044	Chromosome_1A	46183	52	463	36.4593032068077	0.30280561461376004	91.99650294070895	463	0.9848812095032398	93.26156857262687	160	0.9875	91.4940869468658	303	0.9834983498349835	28.216019417475728	34	0.2647058823529412	methylated (>=50%)	P42346	Serine/threonine-protein kinase mTOR (EC 2.7.11.1) (FK506-binding protein 12-rapamycin complex-associated protein 1) (FKBP12-rapamycin complex-associated protein) (Mammalian target of rapamycin) (mTOR) (Mechanistic target of rapamycin) (Rapamycin target protein 1) (RAPT1) (Tyrosine-protein kinase mTOR) (EC 2.7.10.2)	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; behavioral response to pain [GO:0048266]; cardiac cell development [GO:0055006]; cardiac muscle cell development [GO:0055013]; cardiac muscle contraction [GO:0060048]; cardiac muscle tissue development [GO:0048738]; cell projection organization [GO:0030030]; cellular response to amino acid starvation [GO:0034198]; cellular response to amino acid stimulus [GO:0071230]; cellular response to hypoxia [GO:0071456]; cellular response to insulin stimulus [GO:0032869]; cellular response to L-leucine [GO:0071233]; cellular response to leucine starvation [GO:1990253]; cellular response to methionine [GO:0061431]; cellular response to nutrient [GO:0031670]; cellular response to nutrient levels [GO:0031669]; cellular response to starvation [GO:0009267]; energy reserve metabolic process [GO:0006112]; germ cell development [GO:0007281]; heart morphogenesis [GO:0003007]; heart valve morphogenesis [GO:0003179]; inflammatory response [GO:0006954]; long-term memory [GO:0007616]; maternal process involved in female pregnancy [GO:0060135]; mRNA stabilization [GO:0048255]; multicellular organism growth [GO:0035264]; negative regulation of autophagy [GO:0010507]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of cell size [GO:0045792]; negative regulation of cholangiocyte apoptotic process [GO:1904193]; negative regulation of iodide transmembrane transport [GO:1904213]; negative regulation of lysosome organization [GO:1905672]; negative regulation of macroautophagy [GO:0016242]; negative regulation of muscle atrophy [GO:0014736]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of protein phosphorylation [GO:0001933]; negative regulation of protein ubiquitination [GO:0031397]; neuronal action potential [GO:0019228]; peptidyl-serine phosphorylation [GO:0018105]; peptidyl-threonine phosphorylation [GO:0018107]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of cell growth involved in cardiac muscle cell development [GO:0061051]; positive regulation of cellular senescence [GO:2000774]; positive regulation of cholangiocyte proliferation [GO:1904056]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of eating behavior [GO:1904000]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of epithelial cell apoptotic process [GO:1904037]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of glial cell proliferation [GO:0060252]; positive regulation of granulosa cell proliferation [GO:1904197]; positive regulation of keratinocyte migration [GO:0051549]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of myotube differentiation [GO:0010831]; positive regulation of neurogenesis [GO:0050769]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of neuron maturation [GO:0014042]; positive regulation of neuron projection development [GO:0010976]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of oligodendrocyte differentiation [GO:0048714]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of protein kinase activity [GO:0045860]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of ruffle assembly [GO:1900029]; positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process [GO:0062027]; positive regulation of skeletal muscle hypertrophy [GO:1904206]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of stress fiber assembly [GO:0051496]; positive regulation of transcription by RNA polymerase III [GO:0045945]; positive regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901838]; positive regulation of translation [GO:0045727]; positive regulation of translational initiation [GO:0045948]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; positive regulation of wound healing, spreading of epidermal cells [GO:1903691]; post-embryonic development [GO:0009791]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of autophagosome assembly [GO:2000785]; regulation of autophagy [GO:0010506]; regulation of brown fat cell differentiation [GO:0090335]; regulation of carbohydrate metabolic process [GO:0006109]; regulation of carbohydrate utilization [GO:0043610]; regulation of cell growth [GO:0001558]; regulation of cell size [GO:0008361]; regulation of circadian rhythm [GO:0042752]; regulation of fatty acid beta-oxidation [GO:0031998]; regulation of glycogen biosynthetic process [GO:0005979]; regulation of locomotor rhythm [GO:1904059]; regulation of lysosome organization [GO:1905671]; regulation of membrane permeability [GO:0090559]; regulation of myelination [GO:0031641]; regulation of osteoclast differentiation [GO:0045670]; regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051896]; regulation of protein kinase activity [GO:0045859]; regulation of protein phosphorylation [GO:0001932]; regulation of response to food [GO:0032095]; regulation of translation at synapse, modulating synaptic transmission [GO:0099547]; response to activity [GO:0014823]; response to amino acid [GO:0043200]; response to cocaine [GO:0042220]; response to heat [GO:0009408]; response to insulin [GO:0032868]; response to nutrient levels [GO:0031667]; response to virus [GO:0009615]; social behavior [GO:0035176]; spinal cord development [GO:0021510]; T-helper 1 cell lineage commitment [GO:0002296]; TOR signaling [GO:0031929]; TORC1 signaling [GO:0038202]; TORC2 signaling [GO:0038203]; visual learning [GO:0008542]; voluntary musculoskeletal movement [GO:0050882]	hit with GO BP
GN005045	Chromosome_1A	1016	3	14	39.960629921259844	0.3714517013553391	91.983556012333	14	0.9285714285714286	81.94945848375451	4	0.75	95.97701149425288	10	1	93.28028293545535	30	1	methylated (>=50%)	Q99442	Translocation protein SEC62 (Translocation protein 1) (TP-1) (hTP-1)	cotranslational protein targeting to membrane [GO:0006613]; post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; post-translational protein targeting to membrane, translocation [GO:0031204]; reticulophagy [GO:0061709]	hit with GO BP
GN005046	Chromosome_1A	312	1	20	52.56410256410256	1.0317460317460319	0.7471980074719801	20	0	0.7471980074719801	20	0	NA	NA	NA	0.5459890802183957	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005047	Chromosome_1A	8107	9	96	36.190946095966446	0.3618299593711194	87.31112324776988	96	0.9895833333333334	90.24896265560166	19	1	86.68580260543166	77	0.987012987012987	90.28741328047572	14	1	methylated (>=50%)	Q5RC70	DnaJ homolog subfamily C member 11	cristae formation [GO:0042407]	hit with GO BP
GN005048	Chromosome_1A	7112	7	88	33.74578177727784	0.43543988155536506	68.75115633672526	88	0.8068181818181818	64.72275334608031	17	0.7647058823529411	69.71782518926359	71	0.8169014084507042	34.494773519163765	30	0.26666666666666666	methylated (>=50%)	Q9NVH1	DnaJ homolog subfamily C member 11	cristae formation [GO:0042407]; inner mitochondrial membrane organization [GO:0007007]	hit with GO BP
GN005049	Chromosome_1A	2357	2	33	33.38990241832838	0.50412210771923	88.3173076923077	31	1	95.38002980625932	12	1	84.95386799148332	19	1	91.41414141414141	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002290	Chromosome_1A	1728	3	42	37.84722222222222	0.6906737723639133	0.3525264394829612	37	0	0	5	0	0.37735849056603776	32	0	0.7818608287724785	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002291	Chromosome_1A	4981	11	59	34.27022686207589	0.4110828239309544	70.47961015645038	58	0.7931034482758621	93.10661764705883	20	1	61.72180718605478	38	0.6842105263157895	0.5785491766800178	25	0	methylated (>=50%)	P46467	Vacuolar protein sorting-associated protein 4B (EC 3.6.4.6) (Suppressor of K(+) transport growth defect 1) (Protein SKD1)	angiogenesis [GO:0001525]; autophagosome maturation [GO:0097352]; autophagy [GO:0006914]; canonical Wnt signaling pathway [GO:0060070]; central nervous system development [GO:0007417]; cholesterol transport [GO:0030301]; endosomal transport [GO:0016197]; endosome organization [GO:0007032]; endosome to lysosome transport via multivesicular body sorting pathway [GO:0032510]; ESCRT III complex disassembly [GO:1904903]; establishment of blood-brain barrier [GO:0060856]; late endosomal microautophagy [GO:0061738]; late endosome to lysosome transport via multivesicular body sorting pathway [GO:0061764]; membrane fission [GO:0090148]; midbody abscission [GO:0061952]; mitotic metaphase chromosome alignment [GO:0007080]; multivesicular body assembly [GO:0036258]; multivesicular body sorting pathway [GO:0071985]; negative regulation of exosomal secretion [GO:1903542]; nuclear membrane reassembly [GO:0031468]; nucleus organization [GO:0006997]; plasma membrane repair [GO:0001778]; positive regulation of centriole elongation [GO:1903724]; positive regulation of exosomal secretion [GO:1903543]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; potassium ion transport [GO:0006813]; protein depolymerization [GO:0051261]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic spindle assembly [GO:1901673]; response to lipid [GO:0033993]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway [GO:0090611]; vacuolar transport [GO:0007034]; viral budding from plasma membrane [GO:0046761]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN002292	Chromosome_1A	8092	15	245	37.72862086010875	0.8512116372129768	0.5360780529645116	242	0	0.6239826370048833	124	0	0.47863853926608757	118	0	0.8210180623973727	42	0	unmethylated (<10%)	P22758	Protein-glutamine gamma-glutamyltransferase K (EC 2.3.2.13) (Epidermal TGase) (Transglutaminase K) (TG(K)) (TGK) (TGase K) (Transglutaminase-1) (TGase-1) [Cleaved into: Protein-glutamine gamma-glutamyltransferase K 67 kDa chain; Protein-glutamine gamma-glutamyltransferase K 33 kDa chain]	animal organ development [GO:0048513]; positive regulation of cell cycle [GO:0045787]; positive regulation of keratinocyte proliferation [GO:0010838]	hit with GO BP
GN005051	Chromosome_1A	7909	11	219	34.517638133771655	0.9324998963632379	0.6371336481523124	217	0	0.6134969325153374	57	0	0.6452913893930228	160	0	0.5204163330664532	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005052	Chromosome_1A	36695	18	322	34.68864967979289	0.29409477755949265	82.66679392955999	306	0.9705882352941176	84.60236886632826	32	1	82.48787862989417	274	0.9671532846715328	55.66814439518683	34	0.5	methylated (>=50%)	Q6INN8	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (dNTPase) (EC 3.1.5.-)	dATP catabolic process [GO:0046061]; defense response to virus [GO:0051607]; deoxyribonucleotide catabolic process [GO:0009264]; dGTP catabolic process [GO:0006203]; DNA damage response [GO:0006974]; DNA strand resection involved in replication fork processing [GO:0110025]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; protein homotetramerization [GO:0051289]; regulation of innate immune response [GO:0045088]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN005053	Chromosome_1A	1041	1	32	42.93948126801153	0.6683519922956542	42.30118443316413	32	0.28125	42.30118443316413	32	0.28125	NA	NA	NA	25.56908417151932	39	0.28205128205128205	sparse (10-50%)	Q9NS37	CREB/ATF bZIP transcription factor (Host cell factor-binding transcription factor Zhangfei) (HCF-binding transcription factor Zhangfei)	ATF6-mediated unfolded protein response [GO:0036500]; integrated stress response signaling [GO:0140467]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression, epigenetic [GO:0045814]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to virus [GO:0009615]	hit with GO BP
GN005054	Chromosome_1A	1661	4	17	32.269717037928956	0.39314704203388884	42.836149889786924	17	0.47058823529411764	24.496124031007753	9	0.3333333333333333	59.357541899441344	8	0.625	0.7819287576020851	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005055	Chromosome_1A	480	1	22	43.75	0.9805924412665986	0.5272407732864675	22	0	0.5272407732864675	22	0	NA	NA	NA	0.4554865424430642	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005056	Chromosome_1A	1328	2	39	43.90060240963855	0.6097337006427915	0.9090909090909091	11	0	1.2345679012345678	9	0	0	2	0	0.7751937984496124	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005057	Chromosome_1A	19654	17	219	34.82242800447746	0.3677025469923784	87.50803973415279	211	0.966824644549763	89.28571428571429	44	1	87.14887037196117	167	0.9580838323353293	91.77923581628714	46	1	methylated (>=50%)	Q8C3S2	Transport and Golgi organization protein 6 homolog (Transmembrane and coiled-coil domain-containing protein 7)	protein secretion [GO:0009306]	hit with GO BP
GN005058	Chromosome_1A	801	1	25	41.947565543071164	0.7131410256410257	0.8547008547008547	25	0	0.8547008547008547	25	0	NA	NA	NA	1.4460009037505648	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005059	Chromosome_1A	324	1	11	40.4320987654321	0.8319327731092437	0	11	0	0	11	0	NA	NA	NA	1.987083954297069	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005060	Chromosome_1A	10621	11	263	36.72912155164297	0.7360643529917701	1.4816452896948253	263	0	2.021478205938092	42	0	1.410331302678795	221	0	5.557091512303013	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005061	Chromosome_1A	1659	4	26	40.20494273658831	0.3888888888888889	38.84297520661157	22	0.09090909090909091	37.24735322425409	20	0.05	46.00431965442765	2	0.5	53.9332913782253	26	0.7307692307692307	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005062	Chromosome_1A	557	2	4	38.95870736086176	0.1895847515316542	65.55555555555556	4	1	65.55555555555556	4	1	NA	NA	NA	20.199674947759462	36	0.2222222222222222	NA	NA	NA	NA	no Swiss-Prot hit
GN005063	Chromosome_1A	315	1	6	41.26984126984127	0.4474431818181818	0	6	0	0	6	0	NA	NA	NA	0.7743362831858407	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005064	Chromosome_1A	429	2	8	36.36363636363637	0.5802197802197803	0.8771929824561403	8	0	0.6666666666666666	6	0	1.2820512820512822	2	0	3.4400948991696323	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005065	Chromosome_1A	1116	1	52	44.623655913978496	0.9463024867509172	0.5226480836236934	52	0	0.5226480836236934	52	0	NA	NA	NA	0.3546099290780142	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005066	Chromosome_1A	331	2	17	45.9214501510574	0.9913671599718111	0.5580357142857143	17	0	0.5580357142857143	17	0	NA	NA	NA	5.360956856044425	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005067	Chromosome_1A	774	1	13	38.50129198966408	0.47237218909910333	0.5415162454873647	13	0	0.5415162454873647	13	0	NA	NA	NA	1.912751677852349	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005068	Chromosome_1A	213	1	15	52.11267605633803	1.0413950456323338	0.2159827213822894	15	0	0.2159827213822894	15	0	NA	NA	NA	3.16192909613542	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005069	Chromosome_1A	2111	2	80	44.62340123164377	0.7617604207544532	0.478796169630643	72	0	0.43134435657800146	69	0	1.408450704225352	3	0	0.5644090305444888	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005070	Chromosome_1A	7958	4	108	33.890424729831615	0.47463325520931127	67.82935336731956	106	0.8584905660377359	61.52796725784447	14	0.7857142857142857	68.51658979318553	92	0.8695652173913043	1.6872427983539096	57	0	methylated (>=50%)	Q7ZWG9	Sigma non-opioid intracellular receptor 1 (Sigma 1-type opioid receptor) (Sigma1-receptor) (Sigma1R)	regulation of cellular respiration [GO:0043457]; regulation of neuron apoptotic process [GO:0043523]; regulation of response to endoplasmic reticulum stress [GO:1905897]; response to wounding [GO:0009611]; retinal rod cell development [GO:0046548]; swimming behavior [GO:0036269]	hit with GO BP
GN002271	Chromosome_1A	1654	5	52	36.094316807738814	0.9694100674015464	0.6149641270925863	52	0	0.6773399014778325	32	0	0.5372217958557176	20	0	0.6369426751592356	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002272	Chromosome_1A	10725	6	131	33.63170163170163	0.4365212274263245	81.69107227208313	131	0.9236641221374046	73.303167420814475	11	0.8181818181818182	82.25156218504334	120	0.9333333333333333	0.42936882782310004	34	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005072	Chromosome_1A	1203	1	22	40.81463009143807	0.4610158862876254	0.20682523267838676	16	0	0.20682523267838676	16	0	NA	NA	NA	0.3937007874015748	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005073	Chromosome_1A	1771	3	52	36.58949745906268	0.8773006134969326	0.5710446758481693	52	0	0.4631578947368421	42	0	0.9966777408637874	10	0	0.43497172683775553	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005074	Chromosome_1A	5722	6	139	34.25375742747291	0.8296767490476051	0.41903217085698835	139	0	0.39870421131323197	74	0	0.4431314623338257	65	0	0.7653061224489796	8	0	unmethylated (<10%)	Q5RDQ8	Metabotropic glutamate receptor 7 (mGluR7)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; axon development [GO:0061564]	hit with GO BP
GN005075	Chromosome_1A	11110	9	79	33.34833483348335	0.2566685753021015	59.98640149583546	79	0.6708860759493671	41.521394611727416	8	0.5	62.204874333587206	71	0.6901408450704225	48.264553156600165	58	0.4827586206896552	methylated (>=50%)	A7S8T5	Coiled-coil domain-containing protein 42 homolog	NA	hit, no GO BP
GN005076	Chromosome_1A	2017	2	25	37.38225086762519	0.3678294234360411	90.51412020275163	25	1	92.67707082833134	16	1	87.22627737226277	9	1	93.16546762589928	14	1	methylated (>=50%)	Q640K1	Neurochondrin	neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]	hit with GO BP
GN005077	Chromosome_1A	357	1	15	42.296918767507	0.9514925373134329	89.45102260495156	15	1	89.45102260495156	15	1	NA	NA	NA	89.35685828116107	40	1	methylated (>=50%)	O13997	Protein IMPACT homolog	cellular response to amino acid starvation [GO:0034198]; GCN2-mediated signaling [GO:0140469]; regulation of cytoplasmic translational initiation in response to stress [GO:1990611]; regulation of translational initiation [GO:0006446]	hit with GO BP
GN005078	Chromosome_1A	21388	15	226	34.08920890218814	0.364380659892699	84.84272746464006	226	0.9646017699115044	92.187009727016	64	1	82.71952104499275	162	0.9506172839506173	86.42512077294685	24	0.9583333333333334	methylated (>=50%)	Q9P243	Zinc finger protein ZFAT (Zinc finger gene in AITD susceptibility region) (Zinc finger protein 406)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN002227	Chromosome_1A	813	1	5	38.622386223862236	0.16605392156862744	0.9615384615384616	5	0	0.9615384615384616	5	0	NA	NA	NA	0.6717850287907869	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002228	Chromosome_1A	423	1	3	38.061465721040186	0.19859154929577466	0	3	0	0	3	0	NA	NA	NA	2.626970227670753	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002229	Chromosome_1A	15480	10	386	35.89147286821706	0.7743816738690508	1.011137162954279	366	0	0.6146572104018913	74	0	1.1143947789681075	292	0	0.6668889629876625	59	0	unmethylated (<10%)	Q8C1R0	Testis-specific serine/threonine-protein kinase 5 (TSK-5) (TSSK-5) (Testis-specific kinase 5) (EC 2.7.11.1)	NA	hit, no GO BP
GN002230	Chromosome_1A	435	2	2	38.160919540229884	0.12719298245614036	0.9615384615384616	2	0	0.9615384615384616	2	0	NA	NA	NA	1.0204081632653061	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002231	Chromosome_1A	3646	2	147	41.305540318156886	0.9458464514125171	1.9458544839255498	108	0	0.99241097489784	16	0	2.487562189054726	92	0	0.5855735959542188	53	0	unmethylated (<10%)	Q9D305	THAP domain-containing protein 2	NA	hit, no GO BP
GN002232	Chromosome_1A	717	1	13	52.58019525801953	0.26348371777476254	0	8	0	0	8	0	NA	NA	NA	2.8665028665028665	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005081	Chromosome_1A	408	1	9	41.42156862745098	0.5144298122723452	2.9055690072639226	9	0	2.9055690072639226	9	0	NA	NA	NA	2.5974025974025974	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005082	Chromosome_1A	2995	5	129	39.86644407345576	1.0962291453864488	0.619743249225321	119	0	0.7508044333214158	90	0	0.40674026728646134	29	0	0.8256274768824307	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002236	Chromosome_1A	1557	1	23	38.27874116891458	0.40527143713997943	88.59649122807018	23	1	88.59649122807018	23	1	NA	NA	NA	82.74881516587678	13	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005083	Chromosome_1A	3045	3	40	34.15435139573071	0.45184913135899746	83.65641711229947	39	0.9743589743589743	88.34555827220863	19	1	80.39660056657223	20	0.95	79.87505577867023	55	0.8363636363636363	methylated (>=50%)	Q0P6D2	Divergent protein kinase domain 1C (Protein FAM69C)	NA	hit, no GO BP
GN005084	Chromosome_1A	758	2	26	38.91820580474934	0.9104684468262034	0.7339449541284404	26	0	0.8221993833504625	24	0	0	2	0	0.9208874005860193	64	0	unmethylated (<10%)	Q8BQT2	Divergent protein kinase domain 1C (Protein FAM69C)	brain development [GO:0007420]; dendritic spine development [GO:0060996]; gene expression [GO:0010467]; maintenance of synapse structure [GO:0099558]; memory [GO:0007613]; neuron apoptotic process [GO:0051402]; neuron development [GO:0048666]; regulation of synaptic plasticity [GO:0048167]; response to stress [GO:0006950]; synapse organization [GO:0050808]	hit with GO BP
GN005085	Chromosome_1A	1735	2	13	39.36599423631124	0.1935220935220935	93.81443298969072	13	1	93.81443298969072	13	1	NA	NA	NA	83.87096774193549	36	0.9444444444444444	methylated (>=50%)	Q2TB18	Single-strand DNA endonuclease ASTE1 (EC 3.1.-.-) (Protein asteroid homolog 1)	double-strand break repair via homologous recombination [GO:0000724]; double-strand break repair via nonhomologous end joining [GO:0006303]	hit with GO BP
GN005086	Chromosome_1A	1554	1	77	46.782496782496786	0.9420406235238545	1.1300919842312747	77	0	1.1300919842312747	77	0	NA	NA	NA	0.9468540012217471	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005087	Chromosome_1A	1526	3	35	33.48623853211009	0.8324760746906076	0.724309642372114	35	0	0.9966777408637874	15	0	0.5359877488514548	20	0	0.5699088145896657	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005088	Chromosome_1A	3813	1	81	41.856805664830844	0.48560265400459107	16.202240735420855	81	0.2345679012345679	16.202240735420855	81	0.2345679012345679	NA	NA	NA	95.0098814229249	26	1	sparse (10-50%)	Q6B4Z5	Zinc finger Y-chromosomal protein	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005089	Chromosome_1A	198	1	8	46.464646464646464	0.7542857142857143	0	8	0	0	8	0	NA	NA	NA	2.8004667444574096	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005090	Chromosome_1A	1922	4	63	39.75026014568158	0.8310695337648165	0.920951650038373	63	0	0.9130607383882493	61	0	1.1494252873563218	2	0	0.8091210003677822	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002241	Chromosome_1A	5403	8	167	38.108458263927446	0.8515245887715523	0.9907618155040836	163	0	0.5412289079910857	63	0	1.3170055452865064	100	0	0.819672131147541	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002242	Chromosome_1A	12863	9	187	34.90632045401539	0.48010676841322003	73.98228581161642	187	0.7967914438502673	68.78850102669405	20	0.65	74.45208023774146	167	0.8143712574850299	13.87900355871886	20	0.25	methylated (>=50%)	Q5U2W4	Centromere protein N (CENP-N)	CENP-A containing chromatin assembly [GO:0034080]; chromosome segregation [GO:0007059]	hit with GO BP
GN005092	Chromosome_1A	1770	1	56	40.90395480225989	0.7635245996348763	0.5449591280653951	56	0	0.5449591280653951	56	0	NA	NA	NA	0.642570281124498	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005093	Chromosome_1A	3810	7	34	33.62204724409449	0.3187045155957073	91.99640287769785	33	1	95.51569506726457	12	1	90.48231511254019	21	1	92.78350515463917	7	1	methylated (>=50%)	Q9W4P5	V-type proton ATPase subunit d 1 (V-ATPase subunit d 1) (V-ATPase 39 kDa subunit) (Vacuolar H+ ATPase subunit AC39-1) (Vacuolar proton pump subunit d 1)	cellular response to increased oxygen levels [GO:0036295]; intracellular iron ion homeostasis [GO:0006879]; proton transmembrane transport [GO:1902600]; terminal branching, open tracheal system [GO:0007430]; vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]	hit with GO BP
GN005094	Chromosome_1A	1838	7	25	36.34385201305767	0.4119339829847508	58.86120996441281	25	0.6	86.78362573099415	14	0.9285714285714286	15.454545454545455	11	0.18181818181818182	52.8957528957529	36	0.4722222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005095	Chromosome_1A	19574	8	182	34.729743537345456	0.3086046595434152	78.84851344974044	181	0.9005524861878453	83.04347826086956	19	0.8947368421052632	78.44961240310077	162	0.9012345679012346	83.87978142076503	12	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017568	Chromosome_1A	168	1	2	45.23809523809524	0.24086021505376345	NA	0	NA	NA	NA	NA	NA	NA	NA	49.87146529562982	29	0.5862068965517241	NA	NA	NA	NA	no Swiss-Prot hit
GN005096	Chromosome_1A	408	1	12	44.6078431372549	0.6055658627087198	77.9874213836478	12	1	77.9874213836478	12	1	NA	NA	NA	61.42857142857143	22	0.6363636363636364	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005097	Chromosome_1A	1395	1	27	39.2831541218638	0.5055704697986577	95.45216936748562	26	1	95.45216936748562	26	1	NA	NA	NA	92.15742602700374	45	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005098	Chromosome_1A	624	1	29	47.59615384615385	0.8398774714564188	1.0385756676557865	29	0	1.0385756676557865	29	0	NA	NA	NA	12.9973474801061	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005099	Chromosome_1A	5504	7	61	35.02906976744186	0.36304223475817116	63.91463072170738	61	0.639344262295082	45.6221198156682	11	0.6363636363636364	66.45346977934122	50	0.64	56.91225165562914	49	0.4489795918367347	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002254	Chromosome_1A	10509	14	117	34.893900466267006	0.36864662898507966	79.785431959345	116	0.8362068965517241	90.43478260869566	18	1	78.42013059404364	98	0.8061224489795918	55.47232625884311	47	0.3617021276595745	methylated (>=50%)	Q6Y288	Beta-1,3-glucosyltransferase (Beta3Glc-T) (EC 2.4.1.-) (Beta 3-glucosyltransferase) (Beta-3-glycosyltransferase-like)	protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN002255	Chromosome_1A	20906	28	211	34.16722472017602	0.34760051982879564	70.7639634801289	211	0.7962085308056872	83.45549738219896	42	0.9285714285714286	68.89727398737101	169	0.7633136094674556	23.89937106918239	55	0.21818181818181817	methylated (>=50%)	Q23023	Serine/threonine-protein kinase unc-51 (EC 2.7.11.1) (Uncoordinated protein 51)	apoptotic cell clearance [GO:0043277]; autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; axon extension [GO:0048675]; axon guidance [GO:0007411]; axonogenesis [GO:0007409]; cell migration [GO:0016477]; dauer larval development [GO:0040024]; determination of adult lifespan [GO:0008340]; embryo development ending in birth or egg hatching [GO:0009792]; macroautophagy [GO:0016236]; mitophagy [GO:0000423]; nematode male tail tip morphogenesis [GO:0045138]; piecemeal microautophagy of the nucleus [GO:0034727]; programmed cell death [GO:0012501]; regulation of autophagy [GO:0010506]; regulation of axon extension [GO:0030516]; regulation of cell size [GO:0008361]; regulation of multicellular organism growth [GO:0040014]; regulation of protein localization [GO:0032880]; response to starvation [GO:0042594]; reticulophagy [GO:0061709]	hit with GO BP
GN002256	Chromosome_1A	11336	8	194	36.115031757233595	0.5260692257789192	89.85382011953625	194	0.9587628865979382	90.25570145127851	36	0.8888888888888888	89.80707395498392	158	0.9746835443037974	88.62889983579639	41	0.9024390243902439	methylated (>=50%)	O88884	A-kinase anchor protein 1, mitochondrial (A-kinase anchor protein 121 kDa) (AKAP 121) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Protein kinase A-anchoring protein 1) (PRKA1) (Spermatid A-kinase anchor protein 84) (S-AKAP84)	antiviral innate immune response [GO:0140374]; apoptotic process [GO:0006915]; cellular response to cAMP [GO:0071320]; cellular response to peptide hormone stimulus [GO:0071375]; intracellular protein localization [GO:0008104]; negative regulation of cell growth involved in cardiac muscle cell development [GO:0061052]; negative regulation of dephosphorylation [GO:0035305]; negative regulation of protein import into nucleus [GO:0042308]; positive regulation of meiotic cell cycle process involved in oocyte maturation [GO:1904146]	hit with GO BP
GN002257	Chromosome_1A	1359	1	51	40.83885209713024	0.9013342696629213	0.2839756592292089	51	0	0.2839756592292089	51	0	NA	NA	NA	0.47713717693836977	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005102	Chromosome_1A	993	1	38	41.289023162134946	0.9004868270332188	0.4139834406623735	38	0	0.4139834406623735	38	0	NA	NA	NA	0.12330456226880394	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005103	Chromosome_1A	3532	3	127	39.29784824462061	0.9315274455077087	1.4132762312633833	127	0	0.6001500375093773	36	0	1.7380881030866047	91	0	0.5481120584652862	29	0	unmethylated (<10%)	A2VDX7	Exonuclease V (Exo V) (EC 3.1.-.-) (Defects in morphology protein 1 homolog)	interstrand cross-link repair [GO:0036297]	hit with GO BP
GN005104	Chromosome_1A	729	1	21	42.1124828532236	0.6497326203208557	0.9478672985781991	21	0	0.9478672985781991	21	0	NA	NA	NA	1.664636622005684	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005105	Chromosome_1A	573	1	16	42.23385689354276	0.6373305526590198	0.7882882882882883	16	0	0.7882882882882883	16	0	NA	NA	NA	0.5471956224350205	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005106	Chromosome_1A	387	1	12	42.11886304909561	0.7068493150684931	1.3071895424836601	12	0	1.3071895424836601	12	0	NA	NA	NA	1.7463933181473046	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002260	Chromosome_1A	1014	2	26	38.56015779092702	0.689795918367347	0.6165228113440198	26	0	0.47244094488188976	19	0	1.1363636363636365	7	0	0.40753948038716253	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005107	Chromosome_1A	3337	3	98	37.7884327240036	0.822831119162641	1.9770660340055357	98	0	0.9079118028534371	20	0	2.1693491952414274	78	0	0.42905301869445295	65	0	unmethylated (<10%)	P51452	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase VHR) (Vaccinia H1-related phosphatase) (VHR)	cellular response to epidermal growth factor stimulus [GO:0071364]; dephosphorylation [GO:0016311]; negative regulation of cell migration [GO:0030336]; negative regulation of chemotaxis [GO:0050922]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of JNK cascade [GO:0046329]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; peptidyl-tyrosine dephosphorylation [GO:0035335]; positive regulation of focal adhesion disassembly [GO:0120183]; positive regulation of mitotic cell cycle [GO:0045931]; regulation of focal adhesion assembly [GO:0051893]	hit with GO BP
GN002263	Chromosome_1A	1557	1	16	42.13230571612075	0.23260504201680673	72.82415630550622	16	0.875	72.82415630550622	16	0.875	NA	NA	NA	80.4591564335291	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002264	Chromosome_1A	977	2	9	43.602865916069604	0.1945353982300885	86.49237472766885	9	0.8888888888888888	82.11678832116789	7	0.8571428571428571	92.97297297297297	2	1	65.41095890410959	5	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002265	Chromosome_1A	615	1	3	42.60162601626016	0.10753628256688232	86.66666666666667	3	1	86.66666666666667	3	1	NA	NA	NA	28.617478510028654	35	0.3142857142857143	NA	NA	NA	NA	no Swiss-Prot hit
GN002266	Chromosome_1A	35805	21	509	36.327328585393104	0.43285859540942584	79.195097714475	476	0.819327731092437	79.10863509749304	46	0.9130434782608695	79.20294829641941	430	0.8093023255813954	35.153583617747444	28	0.42857142857142855	methylated (>=50%)	Q08J23	RNA cytosine C(5)-methyltransferase NSUN2 (EC 2.1.1.-) (Myc-induced SUN domain-containing protein) (Misu) (NOL1/NOP2/Sun domain family member 2) (Substrate of AIM1/Aurora kinase B) (mRNA cytosine C(5)-methyltransferase) (EC 2.1.1.-) (tRNA cytosine C(5)-methyltransferase) (EC 2.1.1.-, EC 2.1.1.203) (tRNA methyltransferase 4 homolog) (hTrm4)	hair follicle maturation [GO:0048820]; mRNA processing [GO:0006397]; regulation of mRNA export from nucleus [GO:0010793]; regulation of stem cell differentiation [GO:2000736]; tRNA methylation [GO:0030488]; tRNA modification [GO:0006400]; tRNA stabilization [GO:0036416]	hit with GO BP
GN005110	Chromosome_1A	5371	10	54	36.00819214299013	0.3215579318487968	94.07916257769055	54	1	92.57045260461145	19	1	95.01590668080594	35	1	94.68957438500586	58	1	methylated (>=50%)	Q8TBB5	Kelch domain-containing protein 4	NA	hit, no GO BP
GN005111	Chromosome_1A	8358	8	90	33.51280210576693	0.38561779228661885	78.00823771697559	90	0.9	51.571594877764845	15	0.6666666666666666	81.83195824212831	75	0.9466666666666667	69.60315226569097	53	0.7547169811320755	methylated (>=50%)	Q9UH36	SRR1-like protein (SRR1 domain-containing protein)	regulation of circadian rhythm [GO:0042752]; regulation of heme biosynthetic process [GO:0070453]	hit with GO BP
GN005112	Chromosome_1A	21823	14	207	35.192228382898776	0.30669927182226525	70.54425837320574	206	0.8009708737864077	47.28645587541293	45	0.5555555555555556	74.9222705871902	161	0.8695652173913043	0.40526849037487334	27	0	methylated (>=50%)	Q498S6	Zinc finger CCHC domain-containing protein 2	NA	hit, no GO BP
GN005113	Chromosome_1A	1361	4	26	42.9096252755327	0.41532863849765256	95.03407984420643	26	1	96.33867276887872	22	1	87.58169934640523	4	1	65.50522648083624	15	0.8	methylated (>=50%)	Q8BZZ3	NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase WWP1) (WW domain-containing protein 1)	lung development [GO:0030324]; negative regulation of DNA-templated transcription [GO:0045892]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; T cell differentiation [GO:0030217]	hit with GO BP
GN005114	Chromosome_1A	15303	7	253	33.620858655165655	0.5890986757197847	86.0525462212131	235	0.9914893617021276	87.37083811710677	15	1	85.97359735973598	220	0.990909090909091	78.97120672921385	57	0.8421052631578947	methylated (>=50%)	Q4R537	RNA-binding protein NOB1 (EC 3.1.-.-)	maturation of SSU-rRNA [GO:0030490]	hit with GO BP
GN005115	Chromosome_1A	1584	2	54	40.467171717171716	0.8328724440116845	0.5326231691078562	54	0	0.5730659025787965	50	0	0	4	0	0.529625951671632	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005116	Chromosome_1A	957	1	30	41.692789968652036	0.7276091033503979	0.6802721088435374	30	0	0.6802721088435374	30	0	NA	NA	NA	3.4849379799173064	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005117	Chromosome_1A	1401	2	64	42.11277658815132	1.0333644504373682	2.728426395939086	64	0	1.0033444816053512	10	0	3.1323414252153485	54	0	0.5040322580645161	42	0	unmethylated (<10%)	P20060	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (N-acetyl-beta-glucosaminidase subunit beta)	astrocyte cell migration [GO:0043615]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]; glycosphingolipid metabolic process [GO:0006687]; hyaluronan catabolic process [GO:0030214]; intracellular calcium ion homeostasis [GO:0006874]; lipid storage [GO:0019915]; locomotory behavior [GO:0007626]; lysosome organization [GO:0007040]; male courtship behavior [GO:0008049]; myelination [GO:0042552]; N-acetylglucosamine metabolic process [GO:0006044]; neuromuscular process [GO:0050905]; neuromuscular process controlling balance [GO:0050885]; oligosaccharide catabolic process [GO:0009313]; oogenesis [GO:0048477]; penetration of zona pellucida [GO:0007341]; phospholipid biosynthetic process [GO:0008654]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; sensory perception of sound [GO:0007605]; single fertilization [GO:0007338]; skeletal system development [GO:0001501]	hit with GO BP
GN005118	Chromosome_1A	2067	2	58	34.78471214320271	0.9289311782299431	1.0788133053640996	58	0	1.2605042016806722	21	0	1.0293556995806328	37	0	2.562969509500663	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002222	Chromosome_1A	4312	12	111	36.757884972170686	0.7621213134488063	0.5894308943089431	110	0	0.7005253940455342	81	0	0.4358353510895884	29	0	0.7475365273530411	39	0	unmethylated (<10%)	Q8WN96	Inositol 1,4,5-trisphosphate-gated calcium channel ITPR2 (IP3 receptor isoform 2) (IP3R 2) (InsP3R2) (Inositol 1,4,5-trisphosphate receptor type 2) (Type 2 inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3 receptor)	release of sequestered calcium ion into cytosol [GO:0051209]	hit with GO BP
GN002221	Chromosome_1A	405	1	10	48.148148148148145	0.4600181735574739	96.12676056338029	10	1	96.12676056338029	10	1	NA	NA	NA	92.90099769762088	64	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002220	Chromosome_1A	3799	8	48	34.430113187680966	0.42717891654465595	85.60801144492132	46	0.9782608695652174	93.08252427184466	14	1	83.30213403219769	32	0.96875	89.77323254779903	28	0.9285714285714286	methylated (>=50%)	Q5XJS5	THO complex subunit 6 homolog (WD repeat-containing protein 58)	mRNA export from nucleus [GO:0006406]	hit with GO BP
GN005120	Chromosome_1A	1848	1	76	42.586580086580085	0.9072164948453608	0.6841505131128849	76	0	0.6841505131128849	76	0	NA	NA	NA	0.8821170809943866	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005121	Chromosome_1A	14069	17	216	34.458739071717964	0.5196288785305614	78.15148131117388	216	0.8842592592592593	77.60463045414069	45	0.8444444444444444	78.24612776450644	171	0.8947368421052632	0.8997955010224948	41	0	methylated (>=50%)	Q5PQY6	Lon protease homolog 2, peroxisomal (EC 3.4.21.53)	protein import into peroxisome matrix [GO:0016558]; protein processing [GO:0016485]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; protein targeting to peroxisome [GO:0006625]	hit with GO BP
GN005122	Chromosome_1A	474	1	26	44.936708860759495	1.0972222222222223	0.5353319057815846	26	0	0.5353319057815846	26	0	NA	NA	NA	0.5640612409347301	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002217	Chromosome_1A	418	2	12	39.23444976076555	0.7477638640429338	0.9433962264150944	12	0	0.9433962264150944	12	0	NA	NA	NA	10.582010582010582	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002216	Chromosome_1A	8744	11	281	39.28408051235132	0.848918546711416	1.9658753709198813	246	0	0.4897595725734639	63	0	2.354181307097681	183	0	1.999000499750125	46	0	unmethylated (<10%)	P04069	Carboxypeptidase B (EC 3.4.17.2)	proteolysis [GO:0006508]	hit with GO BP
GN005123	Chromosome_1A	18505	12	243	33.61253715212105	0.46515175024826216	85.3865064190112	242	0.9380165289256198	46.04651162790697	6	0.5	85.85406301824213	236	0.9491525423728814	8.366533864541832	62	0	methylated (>=50%)	Q2TBV5	General transcription factor IIH subunit 2 (General transcription factor IIH polypeptide 2)	nucleotide-excision repair [GO:0006289]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN005124	Chromosome_1A	2983	4	75	38.585316795172645	0.678859691710159	0.6524725274725275	62	0	0.6479481641468683	18	0	0.6545820745216515	44	0	1.8724400234055003	68	0	unmethylated (<10%)	Q96CS7	Pleckstrin homology domain-containing family B member 2 (PH domain-containing family B member 2) (Evectin-2)	regulation of cell differentiation [GO:0045595]	hit with GO BP
GN002214	Chromosome_1A	13138	19	361	37.15938499010504	0.7959798370889147	0.8441828666547768	354	0	0.7338413773638159	71	0	0.8736255460159663	283	0	0.29655990510083036	58	0	unmethylated (<10%)	Q8T062	Neprilysin-4 (EC 3.4.24.11)	protein processing [GO:0016485]; proteolysis [GO:0006508]	hit with GO BP
GN005126	Chromosome_1A	5576	7	175	38.21736011477762	0.8613749514494544	1.4501366932128847	166	0	0.8407286314806165	54	0	1.6581632653061225	112	0	0.6686279753944905	77	0	unmethylated (<10%)	P45886	Actin-3, muscle-specific (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN005127	Chromosome_1A	5871	7	113	35.71793561573838	0.6049265979757454	69.94643688868189	111	0.6846846846846847	82.69370021723388	23	0.9130434782608695	67.50381573470237	88	0.625	70.94062007356806	26	0.8846153846153846	methylated (>=50%)	P02578	Actin-1 (EC 3.6.4.-)	cell morphogenesis [GO:0000902]; phagocytosis [GO:0006909]; plasma membrane repair [GO:0001778]; response to cAMP [GO:0051591]	hit with GO BP
GN005128	Chromosome_1A	20530	7	589	39.01607403799318	0.754222529567671	1.2424418123084568	562	0.0017793594306049821	0.6451612903225806	44	0	1.2878213983334077	518	0.0019305019305019305	0.35514967021816335	30	0	unmethylated (<10%)	P35432	Actin-1 (EC 3.6.4.-)	NA	hit, no GO BP
GN005129	Chromosome_1A	22928	25	232	34.64759246336357	0.33800814288046344	80.3570256612194	232	0.853448275862069	78.3864813300627	70	0.8142857142857143	80.9820193637621	162	0.8703703703703703	0.6166982922201139	36	0	methylated (>=50%)	Q5SSL4	Active breakpoint cluster region-related protein	actin cytoskeleton organization [GO:0030036]; activation of GTPase activity [GO:0090630]; brain development [GO:0007420]; inner ear morphogenesis [GO:0042472]; intracellular signal transduction [GO:0035556]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of blood vessel remodeling [GO:0060313]; negative regulation of cell migration [GO:0030336]; negative regulation of cellular extravasation [GO:0002692]; negative regulation of inflammatory response [GO:0050728]; negative regulation of neutrophil degranulation [GO:0043314]; neuromuscular process controlling balance [GO:0050885]; positive regulation of phagocytosis [GO:0050766]; regulation of vascular permeability [GO:0043114]; response to lipopolysaccharide [GO:0032496]	hit with GO BP
GN005130	Chromosome_1A	3596	4	119	42.1579532814238	0.7454083054626532	5.19050248481502	119	0	5.0807537012113055	109	0	5.6923076923076925	10	0	3.87858347386172	29	0	unmethylated (<10%)	P91685	Metabotropic glutamate receptor (DmGluRA)	G protein-coupled glutamate receptor signaling pathway [GO:0007216]; learning [GO:0007612]; long-term memory [GO:0007616]; male courtship behavior [GO:0008049]; neuromuscular junction development [GO:0007528]; regulation of synaptic transmission, glutamatergic [GO:0051966]; short-term memory [GO:0007614]; terminal button organization [GO:0072553]	hit with GO BP
GN005131	Chromosome_1A	7222	9	93	32.885627250069234	0.4793923924867027	89.89985693848355	93	0.989247311827957	90.5860349127182	24	1	89.69550686966208	69	0.9855072463768116	85.5421686746988	12	1	methylated (>=50%)	Q9JMC1	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC 3.1.3.36) (Inositol polyphosphate 5-phosphatase J) (Phosphatidylinositol 1,3,4,5-tetrakisphosphate 5-phosphatase) (EC 3.1.3.56) (Phosphatidylinositol 1,4,5-trisphosphate 5-phosphatase) (EC 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase)	negative regulation of microtubule polymerization [GO:0031115]; negative regulation of neuron projection development [GO:0010977]; negative regulation of peptidyl-serine phosphorylation [GO:0033137]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN002207	Chromosome_1A	3435	4	57	33.47889374090247	0.5978674092870295	92.6693995659513	57	1	92.401215805471125	6	1	92.6925091671032	51	1	89.6113074204947	29	1	methylated (>=50%)	Q9W704	RPA-interacting protein A (RPA-interacting protein alpha) (XRIPalpha)	protein import into nucleus [GO:0006606]	hit with GO BP
GN005132	Chromosome_1A	15128	16	194	32.94553146483342	0.4748550274412343	81.70152428216944	194	0.8350515463917526	73.91573729863693	25	0.68	82.70754943559363	169	0.8579881656804734	28.175895765472312	36	0.16666666666666666	methylated (>=50%)	P67998	Ribosomal protein S6 kinase beta-1 (S6K-beta-1) (S6K1) (EC 2.7.11.1) (70 kDa ribosomal protein S6 kinase 1) (P70S6K1) (p70-S6K 1) (Ribosomal protein S6 kinase I) (p70 ribosomal S6 kinase alpha) (p70 S6 kinase alpha) (p70 S6K-alpha) (p70 S6KA)	cellular response to growth factor stimulus [GO:0071363]; long-chain fatty acid import into cell [GO:0044539]; negative regulation of apoptotic process [GO:0043066]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of TORC2 signaling [GO:1903940]; peptidyl-serine phosphorylation [GO:0018105]; response to glucocorticoid [GO:0051384]; response to ketone [GO:1901654]; TOR signaling [GO:0031929]	hit with GO BP
GN005133	Chromosome_1A	69304	52	1038	35.82332910077341	0.46794872153476896	88.26041314520577	902	0.9656319290465631	89.988358556461	140	0.9642857142857143	88.01970363463137	762	0.9658792650918635	1.0579576816927323	43	0	methylated (>=50%)	Q92616	Stalled ribosome sensor GCN1 (GCN1 eIF-2-alpha kinase activator homolog) (GCN1-like protein 1) (General control of amino-acid synthesis 1-like protein 1) (Translational activator GCN1) (HsGCN1)	cellular response to amino acid starvation [GO:0034198]; GCN2-mediated signaling [GO:0140469]; protein-RNA covalent cross-linking repair [GO:0160127]; regulation of translation [GO:0006417]; rescue of stalled cytosolic ribosome [GO:0072344]	hit with GO BP
GN002205	Chromosome_1A	1314	1	38	44.36834094368341	0.5885431400282886	96.22641509433963	24	1	96.22641509433963	24	1	NA	NA	NA	91.46853146853147	32	1	methylated (>=50%)	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN005134	Chromosome_1A	1155	1	38	39.82683982683983	0.8569085690856909	0.6387735547748323	38	0	0.6387735547748323	38	0	NA	NA	NA	0.5687203791469194	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005135	Chromosome_1A	1353	1	40	39.39393939393939	0.8048780487804879	0.5537098560354374	40	0	0.5537098560354374	40	0	NA	NA	NA	0.33621517771373677	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005136	Chromosome_1A	8766	9	250	35.592060232717316	0.903012762085908	0.7836758834836611	249	0	0.6337558372248165	49	0	0.8263677811550152	200	0	0.8481764206955047	34	0	unmethylated (<10%)	Q9GKX6	Galactose mutarotase (EC 5.1.3.3) (Aldose 1-epimerase)	galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; glucose metabolic process [GO:0006006]	hit with GO BP
GN005137	Chromosome_1A	354	1	4	42.090395480225986	0.25513513513513514	0	4	0	0	4	0	NA	NA	NA	0.7352941176470589	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005138	Chromosome_1A	609	1	15	44.827586206896555	0.495874497882966	1.0476190476190477	15	0	1.0476190476190477	15	0	NA	NA	NA	8.466640655481857	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005139	Chromosome_1A	753	1	21	37.84860557768924	0.7829768270944741	0.6484483557202408	21	0	0.6484483557202408	21	0	NA	NA	NA	2.4203069657615113	52	0	unmethylated (<10%)	A0A7M7H6R7	Lewis-type alpha-(1,3)-fucosyltransferase (EC 2.4.1.152) (Fucosyltransferase C) (AmFucTC)	N-glycan processing [GO:0006491]	hit with GO BP
GN005140	Chromosome_1A	456	1	17	43.421052631578945	0.8048172757475083	1.1428571428571428	17	0	1.1428571428571428	17	0	NA	NA	NA	0.8888888888888888	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002131	Chromosome_1A	1557	1	18	38.59987154784843	0.3145101559869824	80.98006644518273	18	0.9444444444444444	80.98006644518273	18	0.9444444444444444	NA	NA	NA	86.7175572519084	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002130	Chromosome_1A	708	2	7	35.16949152542373	0.32299270072992703	70.2258726899384	7	1	71.62629757785467	5	1	68.18181818181819	2	1	86.09593199757134	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005141	Chromosome_1A	750	1	39	48.13333333333333	0.9318254221089519	0.8576329331046312	39	0	0.8576329331046312	39	0	NA	NA	NA	1.0984699882306788	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005142	Chromosome_1A	9982	22	88	35.283510318573434	0.2833511338516182	77.26538668580656	87	0.8620689655172413	71.7175572519084	48	0.7708333333333334	82.18760582458516	39	0.9743589743589743	17.391304347826086	31	0.1935483870967742	methylated (>=50%)	Q8TBY9	Cilia- and flagella-associated protein 251 (WD repeat-containing protein 66)	cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN002142	Chromosome_1A	11675	7	178	37.67880085653105	0.42964235579179355	84.39895307534118	178	0.9775280898876404	92.9113924050633	8	1	84.07260021353004	170	0.9764705882352941	74.46808510638297	4	0.75	methylated (>=50%)	Q6NRQ2	Nucleolar complex protein 4 homolog A (NOC4 protein homolog A) (NOC4-like protein A) (Nucleolar complex-associated protein 4-like protein A)	ribosome biogenesis [GO:0042254]	hit with GO BP
GN005143	Chromosome_1A	20743	26	304	37.32825531504604	0.42130874005551555	92.06221198156682	303	0.9900990099009901	95.32751091703057	112	1	90.89201877934272	191	0.9842931937172775	84.3042071197411	21	1	methylated (>=50%)	Q9NDJ2	Chromatin remodeling protein domino (EC 3.6.4.-)	chromatin organization [GO:0006325]; chromatin remodeling [GO:0006338]; dendrite guidance [GO:0070983]; dendrite morphogenesis [GO:0048813]; DNA repair-dependent chromatin remodeling [GO:0140861]; hemopoiesis [GO:0030097]; male germ-line stem cell population maintenance [GO:0036098]; negative regulation of gene expression [GO:0010629]; negative regulation of hemocyte proliferation [GO:0035207]; nervous system development [GO:0007399]; oogenesis [GO:0048477]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; somatic stem cell population maintenance [GO:0035019]; transcription initiation-coupled chromatin remodeling [GO:0045815]; wing disc pattern formation [GO:0035222]	hit with GO BP
GN002146	Chromosome_1A	1097	3	16	48.67821330902461	0.2567095198397028	82.3529411764706	13	1	82.3529411764706	13	1	NA	NA	NA	94.06060606060606	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005144	Chromosome_1A	405	1	4	42.71604938271605	0.21669341894060995	1.8518518518518519	4	0	1.8518518518518519	4	0	NA	NA	NA	8.414725770097672	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005145	Chromosome_1A	312	1	13	44.23076923076923	0.9806576402321083	0.2528445006321112	13	0	0.2528445006321112	13	0	NA	NA	NA	1.454823889739663	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005146	Chromosome_1A	1047	2	15	49.47468958930277	0.24693396226415093	0	9	0	0	9	0	NA	NA	NA	0.9462151394422311	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005147	Chromosome_1A	2703	11	80	38.29078801331853	0.8076190476190476	0.448681996634885	80	0	0.4537953795379538	57	0	0.43782837127845886	23	0	0.48484848484848486	21	0	unmethylated (<10%)	Q9JHI0	Matrix metalloproteinase-19 (MMP-19) (EC 3.4.24.-) (Matrix metalloproteinase RASI)	collagen catabolic process [GO:0030574]; extracellular matrix organization [GO:0030198]; luteolysis [GO:0001554]; ovarian follicle development [GO:0001541]; ovulation from ovarian follicle [GO:0001542]; proteolysis [GO:0006508]; response to cAMP [GO:0051591]; response to hormone [GO:0009725]	hit with GO BP
GN005148	Chromosome_1A	303	1	10	43.8943894389439	0.688323489323035	0.7194244604316546	10	0	0.7194244604316546	10	0	NA	NA	NA	0.6199628022318661	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005149	Chromosome_1A	2316	1	72	38.773747841105354	0.8337558312208438	0.4206098843322818	72	0	0.4206098843322818	72	0	NA	NA	NA	0.36119711042311664	72	0	unmethylated (<10%)	Q9UH65	Switch-associated protein 70 (SWAP-70)	actin filament bundle assembly [GO:0051017]; negative regulation of actin filament depolymerization [GO:0030835]; negative regulation of cell-cell adhesion mediated by integrin [GO:0033633]; positive regulation of actin filament bundle assembly [GO:0032233]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of mast cell chemotaxis [GO:0060754]; regulation of protein localization [GO:0032880]; regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN005150	Chromosome_1A	4473	6	81	33.199195171026155	0.6578490578370743	84.30727843371693	81	0.8888888888888888	50	16	0.5	90.29313673863437	65	0.9846153846153847	1.9136626613262127	36	0	methylated (>=50%)	O60671	Cell cycle checkpoint protein RAD1 (hRAD1) (Rad1-like DNA damage checkpoint protein)	cellular response to ionizing radiation [GO:0071479]; DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; meiotic recombination checkpoint signaling [GO:0051598]; substantia nigra development [GO:0021762]	hit with GO BP
GN005151	Chromosome_1A	4262	9	140	38.66729235100892	0.882307710507015	3.48420709866493	140	0	4.032258064516129	90	0	2.7715355805243447	50	0	0.4370629370629371	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005152	Chromosome_1A	522	1	12	47.31800766283525	0.44331210191082804	1.1299435028248588	12	0	1.1299435028248588	12	0	NA	NA	NA	0.5641748942172073	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005153	Chromosome_1A	2431	3	85	37.6799670917318	0.9893279837597672	0.77079107505071	85	0	0.7592190889370932	16	0	0.7734530938123753	69	0	0.7603186097031137	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005154	Chromosome_1A	35126	28	418	33.67875647668394	0.42019775411914295	76.97295587537562	413	0.9079903147699758	83.43085925469664	52	0.9615384615384616	76.23378454596728	361	0.9002770083102493	1.9083969465648856	40	0	methylated (>=50%)	Q9VGH7	Chloride channel protein 2 (ClC-2) (DmClC-2) (Chloride channel-a)	chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; renal water homeostasis [GO:0003091]; renal water transport [GO:0003097]; transepithelial chloride transport [GO:0030321]; transepithelial water transport [GO:0035377]	hit with GO BP
GN005155	Chromosome_1A	15813	13	183	33.95307658255865	0.40393916831311666	85.74022829470772	182	0.9615384615384616	87.74219058916567	49	1	85.17985611510791	133	0.9473684210526315	6.688417618270799	38	0.02631578947368421	methylated (>=50%)	Q9H3D4	Tumor protein 63 (p63) (Chronic ulcerative stomatitis protein) (CUSP) (Keratinocyte transcription factor KET) (Transformation-related protein 63) (TP63) (Tumor protein p73-like) (p73L) (p40) (p51)	apoptotic process [GO:0006915]; DNA damage response [GO:0006974]; establishment of skin barrier [GO:0061436]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; negative regulation of cellular senescence [GO:2000773]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of intracellular estrogen receptor signaling pathway [GO:0033147]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of cell cycle G1/S phase transition [GO:1902808]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of fibroblast apoptotic process [GO:2000271]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of somatic stem cell population maintenance [GO:1904674]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein tetramerization [GO:0051262]; regulation of apoptotic process [GO:0042981]; regulation of epidermal cell division [GO:0010482]; spermatogenesis [GO:0007283]	hit with GO BP
GN005156	Chromosome_1A	2967	2	36	45.97236265588136	0.24198020878642887	92.47197010144154	36	1	NA	NA	NA	92.47197010144154	36	1	57.46812386156648	18	0.7222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005157	Chromosome_1A	284	2	0	35.563380281690144	0	NA	0	NA	NA	NA	NA	NA	NA	NA	72.60519247985675	14	0.8571428571428571	NA	Q9P2S5	WD repeat-containing protein WRAP73 (WD repeat-containing protein 8) (WD repeat-containing protein antisense to TP73 gene)	microtubule anchoring at mitotic spindle pole body [GO:1990810]; mitotic spindle assembly [GO:0090307]; positive regulation of non-motile cilium assembly [GO:1902857]	hit with GO BP
GN005158	Chromosome_1A	1860	2	72	41.075268817204304	0.9184996193493961	0.5274261603375527	72	0	0.5985463873450192	64	0	0.19801980198019803	8	0	0.5102040816326531	56	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN005159	Chromosome_1A	516	1	14	46.51162790697674	0.5019804044194288	0	5	0	0	5	0	NA	NA	NA	1.1049723756906078	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005160	Chromosome_1A	1187	2	22	40.94355518112889	0.46098714870780966	0.7442849548112705	22	0	0.7442849548112705	22	0	NA	NA	NA	1.780264496439471	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005161	Chromosome_1A	1911	4	43	36.42072213500785	0.6820524738751151	0.3448275862068966	43	0	0.18484288354898337	12	0	0.40295500335795836	31	0	0.6417516043790109	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005162	Chromosome_1A	10633	4	316	37.04504843412019	0.8662790787611281	0.9428879310344828	304	0	0.6088992974238876	57	0	0.9989774246833949	247	0	0.5386875612144956	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002162	Chromosome_1A	913	4	30	38.66374589266155	0.8804243008678881	0.4778156996587031	30	0	0.3412969283276451	24	0	1.023890784982935	6	0	0.4432321854756222	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002163	Chromosome_1A	6828	4	145	37.82952548330404	0.5935910441533027	0.8429626823261982	125	0	0.7194244604316546	20	0	0.8595680670463093	105	0	0.6403415154749199	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005164	Chromosome_1A	324	1	13	41.97530864197531	0.9716262975778547	0.3502626970227671	13	0	0.3502626970227671	13	0	NA	NA	NA	1.5909090909090908	69	0	unmethylated (<10%)	Q99L20	Glutathione S-transferase theta-3 (EC 2.5.1.18)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN002164	Chromosome_1A	19951	16	216	34.95564132123703	0.3578188492132191	65.35041446872646	216	0.6342592592592593	80.76347305389221	59	0.847457627118644	61.464427250424606	157	0.554140127388535	1.1052937754508436	55	0	methylated (>=50%)	Q9BZE2	tRNA pseudouridine(38/39) synthase (EC 5.4.99.45) (tRNA pseudouridine synthase 3) (tRNA pseudouridylate synthase 3) (tRNA-uridine isomerase 3)	mRNA pseudouridine synthesis [GO:1990481]; tRNA modification [GO:0006400]; tRNA pseudouridine synthesis [GO:0031119]	hit with GO BP
GN002165	Chromosome_1A	1342	4	17	34.575260804769	0.424059926764438	25.682507583417593	17	0.29411764705882354	34.110169491525426	9	0.4444444444444444	17.988394584139265	8	0.125	0.7343124165554072	46	0	sparse (10-50%)	Q3SZ87	Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma)	SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	hit with GO BP
GN005165	Chromosome_1A	180	1	14	52.22222222222222	1.1491108071135432	1.0416666666666667	14	0	1.0416666666666667	14	0	NA	NA	NA	0.49318247751668115	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005166	Chromosome_1A	19710	6	205	36.61593099949264	0.3114456898006942	86.32155301144849	195	0.9333333333333333	86.0576923076923	5	1	86.32713225576903	190	0.9315789473684211	93.26095095469861	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005167	Chromosome_1A	531	1	12	44.632768361581924	0.4573643410852713	97.51861042183623	12	1	97.51861042183623	12	1	NA	NA	NA	92.38302502720349	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005168	Chromosome_1A	878	2	20	38.15489749430524	0.6320184278721567	54.411764705882355	20	0.5	66.37554585152839	16	0.625	8.75	4	0	2.1711635750421587	71	0	methylated (>=50%)	Q6DBQ8	Ceramide-1-phosphate transfer protein (Glycolipid transfer protein domain-containing protein 1) (CPTP)	ceramide 1-phosphate transport [GO:1902389]; ceramide transport [GO:0035627]; intermembrane lipid transfer [GO:0120009]; negative regulation of autophagy [GO:0010507]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]	hit with GO BP
GN005169	Chromosome_1A	1170	1	25	40.94017094017094	0.5099905847892039	11.255411255411255	25	0	11.255411255411255	25	0	NA	NA	NA	0.5076142131979695	30	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005170	Chromosome_1A	9549	12	163	35.721017907634305	0.5359733584753368	70.08304032318397	163	0.8711656441717791	65.89358799454297	22	0.7272727272727273	70.59910931854466	141	0.8936170212765957	16.545334215751158	23	0.17391304347826086	methylated (>=50%)	Q68FT9	Selenocysteine lyase (EC 4.4.1.16)	lipid metabolic process [GO:0006629]; negative regulation of cellular response to oxidative stress [GO:1900408]; response to insulin [GO:0032868]; selenium compound metabolic process [GO:0001887]	hit with GO BP
GN005171	Chromosome_1A	9749	12	92	34.003487537183304	0.3271834531061905	84.64311463590484	92	0.9565217391304348	92.33603537214444	27	1	82.1522309711286	65	0.9384615384615385	91.5915915915916	24	1	methylated (>=50%)	O00329	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform (PI3-kinase subunit delta) (PI3K-delta) (PI3Kdelta) (PtdIns-3-kinase subunit delta) (EC 2.7.1.137) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta) (PtdIns-3-kinase subunit p110-delta) (p110delta)	adaptive immune response [GO:0002250]; B cell activation [GO:0042113]; B cell chemotaxis [GO:0035754]; B cell differentiation [GO:0030183]; B cell receptor signaling pathway [GO:0050853]; cell migration [GO:0016477]; immune response [GO:0006955]; inflammatory response [GO:0006954]; innate immune response [GO:0045087]; mast cell chemotaxis [GO:0002551]; mast cell degranulation [GO:0043303]; mast cell differentiation [GO:0060374]; natural killer cell activation [GO:0030101]; natural killer cell chemotaxis [GO:0035747]; natural killer cell differentiation [GO:0001779]; neutrophil chemotaxis [GO:0030593]; neutrophil extravasation [GO:0072672]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; phosphatidylinositol-3-phosphate biosynthetic process [GO:0036092]; phosphatidylinositol-mediated signaling [GO:0048015]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell migration [GO:0030335]; positive regulation of cytokine production [GO:0001819]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of epithelial tube formation [GO:1905278]; positive regulation of gene expression [GO:0010628]; positive regulation of neutrophil apoptotic process [GO:0033031]; protein phosphorylation [GO:0006468]; respiratory burst involved in defense response [GO:0002679]; signal transduction [GO:0007165]; T cell activation [GO:0042110]; T cell chemotaxis [GO:0010818]; T cell costimulation [GO:0031295]; T cell differentiation [GO:0030217]; T cell receptor signaling pathway [GO:0050852]; vascular endothelial growth factor signaling pathway [GO:0038084]	hit with GO BP
GN005172	Chromosome_1A	402	1	3	36.81592039800995	0.22283813747228381	0.746268656716418	3	0	0.746268656716418	3	0	NA	NA	NA	0.42492917847025496	66	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005173	Chromosome_1A	648	1	20	40.74074074074074	0.7439724454649828	0.18001800180018002	20	0	0.18001800180018002	20	0	NA	NA	NA	0.44353462981917435	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005174	Chromosome_1A	1945	4	41	36.401028277634964	0.6419296932228904	82.50825082508251	41	1	83.2632464255677	17	1	82.02064095600217	24	1	83.01746562616128	45	0.9777777777777777	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005175	Chromosome_1A	1965	1	74	43.155216284987276	0.809127938034188	0.5605381165919282	74	0	0.5605381165919282	74	0	NA	NA	NA	0.42498937526561836	68	0	unmethylated (<10%)	Q2M385	Macrophage-expressed gene 1 protein (Macrophage gene 1 protein) (Mpg-1) (Perforin-2) (P-2) [Cleaved into: Macrophage-expressed gene 1 protein, processed form]	antibacterial innate immune response [GO:0140367]; antigen processing and presentation of exogenous peptide antigen [GO:0002478]; antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]; defense response to bacterium [GO:0042742]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; dendritic cell antigen processing and presentation [GO:0002468]	hit with GO BP
GN005176	Chromosome_1A	2184	1	79	42.353479853479854	0.8094581280788178	0.44096031357177856	79	0	0.44096031357177856	79	0	NA	NA	NA	0.44955044955044954	67	0	unmethylated (<10%)	Q5RBP9	Macrophage-expressed gene 1 protein (Macrophage gene 1 protein) (Mpg-1) (Perforin-2) (P-2) [Cleaved into: Macrophage-expressed gene 1 protein, processed form]	antibacterial innate immune response [GO:0140367]; antigen processing and presentation of exogenous peptide antigen [GO:0002478]; antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]; defense response to bacterium [GO:0042742]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; dendritic cell antigen processing and presentation [GO:0002468]	hit with GO BP
GN005177	Chromosome_1A	5545	6	149	34.878268710550046	0.8837428454379271	0.6444796619123085	149	0	0.810611643330877	32	0	0.61667488899852	117	0	1.10803324099723	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005178	Chromosome_1A	615	1	16	40.8130081300813	0.6300422589320015	0.1342281879194631	16	0	0.1342281879194631	16	0	NA	NA	NA	0.6555723651033787	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005179	Chromosome_1A	19518	24	238	36.48939440516446	0.3667712170493579	89.70588235294117	236	0.9957627118644068	93.90751162221679	79	1	88.07557201177252	157	0.9936305732484076	91.57635467980296	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005180	Chromosome_1A	970	3	24	42.06185567010309	0.5607476635514018	46.10655737704918	19	0.5789473684210527	47.65840220385675	17	0.5882352941176471	41.6	2	0.5	85.88459704339533	35	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005181	Chromosome_1A	489	1	11	46.625766871165645	0.41440677966101697	93.47258485639686	11	1	93.47258485639686	11	1	NA	NA	NA	92.57698541329012	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005182	Chromosome_1A	11440	11	87	34.68531468531469	0.25454653336102295	84.55136012992286	87	0.9425287356321839	88.70689655172414	24	0.9583333333333334	83.27137546468401	63	0.9365079365079365	1.6487455197132617	36	0	methylated (>=50%)	Q5R5S1	F-box only protein 21	NA	hit, no GO BP
GN005183	Chromosome_1A	2271	6	32	36.85601056803171	0.4150645968267023	79.1044776119403	32	0.96875	75.64674397859055	22	0.9545454545454546	84.23841059602648	10	1	0.9276437847866419	47	0	methylated (>=50%)	Q969V4	Tektin-1	cilium assembly [GO:0060271]; cilium movement involved in cell motility [GO:0060294]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN005184	Chromosome_1A	1701	1	53	41.09347442680776	0.7416947758124228	19.892473118279568	53	0.03773584905660377	19.892473118279568	53	0.03773584905660377	NA	NA	NA	1.3406156901688182	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005185	Chromosome_1A	4735	7	109	38.24709609292503	0.6298171496629521	30.294299238526445	109	0.06422018348623854	34.92520138089758	41	0.024390243902439025	27.715475809035567	68	0.08823529411764706	0.8605416350291065	60	0	sparse (10-50%)	P0C872	Bifunctional peptidase and (3S)-lysyl hydroxylase Jmjd7 (EC 1.14.11.63) (EC 3.4.-.-) (JmjC domain-containing protein 7) (Jumonji domain-containing protein 7) (L-lysine (3S)-hydroxylase Jmjd7)	protein hydroxylation [GO:0018126]	hit with GO BP
GN002183	Chromosome_1A	14093	10	403	36.088838430426456	0.878671283827113	3.230254087059287	402	0	3.6036036036036037	70	0	3.176569980287243	332	0	0.9090909090909091	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002184	Chromosome_1A	6742	6	159	36.443191931177694	0.7103416468866915	0.8449960390810668	159	0	0.6128702757916241	27	0	0.8794541319181198	132	0	0.28044871794871795	65	0	unmethylated (<10%)	P50430	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	anterior head development [GO:0097065]; autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN002188	Chromosome_1A	33729	34	348	36.25959856503306	0.3162657439159954	86.06498593258675	346	0.9479768786127167	89.76308862240421	71	0.971830985915493	85.20533043241772	275	0.9418181818181818	93.29529243937233	34	1	methylated (>=50%)	Q99570	Phosphoinositide 3-kinase regulatory subunit 4 (PI3-kinase regulatory subunit 4) (EC 2.7.11.1) (PI3-kinase p150 subunit) (Phosphoinositide 3-kinase adaptor protein)	autophagosome maturation [GO:0097352]; cellular response to glucose starvation [GO:0042149]; early endosome to late endosome transport [GO:0045022]; late endosome to vacuole transport [GO:0045324]; macroautophagy [GO:0016236]; pexophagy [GO:0000425]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; phosphatidylinositol-3-phosphate biosynthetic process [GO:0036092]; protein phosphorylation [GO:0006468]; protein targeting to lysosome [GO:0006622]; protein targeting to vacuole [GO:0006623]; receptor catabolic process [GO:0032801]; regulation of autophagy [GO:0010506]; regulation of cytokinesis [GO:0032465]; regulation of macroautophagy [GO:0016241]	hit with GO BP
GN005187	Chromosome_1A	2073	1	23	40.95513748191028	0.26459815532148684	91.6289592760181	23	0.9565217391304348	91.6289592760181	23	0.9565217391304348	NA	NA	NA	89.18181818181819	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005189	Chromosome_1A	5878	6	94	39.63933310649881	0.40884413692266597	86.27311522048365	85	0.9764705882352941	84.12570507655117	39	0.9743589743589743	87.96944621260344	46	0.9782608695652174	67.2911787665886	21	0.8571428571428571	methylated (>=50%)	Q4R7H0	Protein polyglycylase TTLL10 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 10)	protein polyglycylation [GO:0018094]	hit with GO BP
GN005190	Chromosome_1A	524	2	8	40.83969465648855	0.36643356643356645	72.88135593220339	8	0.875	73.46938775510205	7	0.8571428571428571	70	1	1	60.858369098712444	21	0.8095238095238095	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005191	Chromosome_1A	471	1	20	40.552016985138	1.0827586206896551	0.9769713886950454	20	0	0.9769713886950454	20	0	NA	NA	NA	0.6501950585175552	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002190	Chromosome_1A	12411	6	204	35.78277334622512	0.5135336210813267	87.74733637747336	194	0.9690721649484536	76.90014903129658	13	1	88.3998207082026	181	0.9668508287292817	95.6513794993605	59	1	methylated (>=50%)	Q1T7B9	Centromere protein M (CENP-M)	NA	hit, no GO BP
GN005192	Chromosome_1A	1143	1	38	40.332458442694666	1.0047189451769605	0.23771790808240886	38	0	0.23771790808240886	38	0	NA	NA	NA	0.6657789613848203	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005193	Chromosome_1A	1053	4	35	36.75213675213675	0.9857968223399133	0.5825242718446602	35	0	0.7209805335255948	25	0	0.2971768202080238	10	0	1.8754688672168043	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005194	Chromosome_1A	744	1	35	42.60752688172043	1.0382775119617225	0.37243947858473	35	0	0.37243947858473	35	0	NA	NA	NA	0.6540222367560498	85	0	unmethylated (<10%)	Q0EAB5	5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (Serotonin receptor 1B)	adenylate cyclase-inhibiting serotonin receptor signaling pathway [GO:0007198]; bone remodeling [GO:0046849]; cellular response to alkaloid [GO:0071312]; cellular response to xenobiotic stimulus [GO:0071466]; chemical synaptic transmission [GO:0007268]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; negative regulation of serotonin secretion [GO:0014063]; regulation of behavior [GO:0050795]; vasoconstriction [GO:0042310]	hit with GO BP
GN005195	Chromosome_1A	1073	2	14	41.75209692451072	0.3077837195484254	0.6928406466512702	14	0	0.6928406466512702	14	0	NA	NA	NA	0.4280821917808219	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005196	Chromosome_1A	960	1	39	39.583333333333336	1.0389610389610389	0.7357859531772575	39	0	0.7357859531772575	39	0	NA	NA	NA	0.5074424898511503	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002122	Chromosome_1A	911	2	25	33.260153677277714	1.004188712522046	0.34782608695652173	25	0	0.36101083032490977	24	0	0	1	0	0.6306760847628657	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002118	Chromosome_1A	825	1	34	43.03030303030303	0.8903066082650923	0.8587786259541985	34	0	0.8587786259541985	34	0	NA	NA	NA	0.5036373810856184	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002124	Chromosome_1A	1343	1	63	44.52717795979151	0.9510903776978418	0.4652605459057072	63	0	0.4652605459057072	63	0	NA	NA	NA	0.7898285494124446	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005197	Chromosome_1A	905	2	23	33.812154696132595	0.9046460080837933	0.5889281507656066	23	0	0.6138735420503376	22	0	0	1	0	1.46163215590743	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005198	Chromosome_1A	576	1	17	34.895833333333336	0.9801801801801802	0.38639876352395675	17	0	0.38639876352395675	17	0	NA	NA	NA	1.128783991790662	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020993	Chromosome_1A	6178	5	157	36.04726448688896	0.7823457483190729	0.5698655117392295	157	0	0.17142857142857143	32	0	0.6691343963553531	125	0	4.338771259979174	75	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN005199	Chromosome_1A	159	1	8	55.9748427672956	0.6430738119312437	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4277722935176045	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005200	Chromosome_1A	774	1	18	40.69767441860465	0.574420714109013	0.8434864104967198	18	0	0.8434864104967198	18	0	NA	NA	NA	0.2965159377316531	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005201	Chromosome_1A	825	1	38	43.63636363636363	0.9677120632176812	0.19193857965451055	38	0	0.19193857965451055	38	0	NA	NA	NA	0.34572169403630076	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005202	Chromosome_1A	1328	4	45	37.725903614457835	0.9564966868337654	0.6514657980456026	45	0	0.2971768202080238	14	0	0.7851934941110488	31	0	0.5012531328320802	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005203	Chromosome_1A	1359	1	30	42.01618837380427	0.5055803571428571	0.43010752688172044	19	0	0.43010752688172044	19	0	NA	NA	NA	0.5025125628140703	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002116	Chromosome_1A	531	1	6	40.67796610169491	0.2760114355020359	0.3816793893129771	6	0	0.3816793893129771	6	0	NA	NA	NA	0.22779043280182232	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005204	Chromosome_1A	1071	2	14	38.00186741363212	0.36212143167656863	0.17094017094017094	14	0	0.2074688796680498	11	0	0	3	0	0.38743004735256137	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005205	Chromosome_1A	552	1	3	37.13768115942029	0.17293233082706766	0.6578947368421053	3	0	0.6578947368421053	3	0	NA	NA	NA	3.2144786601836843	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005206	Chromosome_1A	1663	2	24	39.38665063138905	0.3729535770352097	0.5108556832694764	24	0	0.7142857142857143	17	0	0.27548209366391185	7	0	0.42650918635170604	52	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN005207	Chromosome_1A	1086	1	43	43.554327808471456	0.8372418244406197	0.5833333333333334	43	0	0.5833333333333334	43	0	NA	NA	NA	0.6045105789351314	63	0	unmethylated (<10%)	A2VE54	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN005208	Chromosome_1A	249	1	13	53.01204819277108	0.7431129476584022	1.0676156583629892	13	0	1.0676156583629892	13	0	NA	NA	NA	0.29081844619858743	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005209	Chromosome_1A	303	1	10	46.53465346534654	0.6133603238866396	0	10	0	0	10	0	NA	NA	NA	0.6363347120585428	63	0	unmethylated (<10%)	Q710D3	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN002112	Chromosome_1A	13506	8	348	36.67999407670665	0.7660545733579683	1.727758113864059	344	0	1.0242085661080074	39	0	1.8318297637903727	305	0	2.9135338345864663	15	0	unmethylated (<10%)	Q03567	Uncharacterized transporter slc-17.2	NA	hit, no GO BP
GN002113	Chromosome_1A	47975	3	1263	35.09536216779573	0.8551298753259532	0.754261577915221	1126	0	0.5903187721369539	19	0	0.7566225728568028	1107	0	0.7623888182973316	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002111	Chromosome_1A	717	1	31	44.490934449093444	0.8747343565525384	0.6956521739130435	31	0	0.6956521739130435	31	0	NA	NA	NA	1.4457174031642117	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005211	Chromosome_1A	465	1	4	39.13978494623656	0.2540983606557377	0.30959752321981426	4	0	0.30959752321981426	4	0	NA	NA	NA	0.9513742071881607	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005212	Chromosome_1A	1062	1	9	37.94726930320151	0.23811659192825113	0.46511627906976744	9	0	0.46511627906976744	9	0	NA	NA	NA	2.277348515656771	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002108	Chromosome_1A	2790	4	23	33.04659498207885	0.30369718309859156	0.8347978910369068	20	0	0.9504412763068567	16	0	0.6226650062266501	4	0	0.8284023668639053	42	0	unmethylated (<10%)	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN002107	Chromosome_1A	614	2	15	38.762214983713356	0.6505615596524688	0.6211180124223602	15	0	0.6211180124223602	15	0	NA	NA	NA	2.9447852760736195	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005214	Chromosome_1A	7026	2	257	37.85937944776544	1.0215843456210951	4.872314022598132	257	0	0.6747638326585695	34	0	5.322149106949165	223	0	1.4177693761814745	36	0	unmethylated (<10%)	Q23157	Innexin-11 (Protein opu-11)	NA	hit, no GO BP
GN005215	Chromosome_1A	1911	2	66	40.816326530612244	0.830300716241837	0.466893039049236	66	0	0.572737686139748	20	0	0.4045853000674309	46	0	0.777302759424796	41	0	unmethylated (<10%)	Q5UAW9	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN005216	Chromosome_1A	3999	5	254	43.28582145536384	1.5362670869266672	3.6369386464263123	74	0	6.429548563611491	33	0	2.797202797202797	41	0	7.753386268099019	52	0.057692307692307696	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005217	Chromosome_1A	477	1	10	40.25157232704402	0.5232558139534884	0.759493670886076	10	0	0.759493670886076	10	0	NA	NA	NA	1.09717868338558	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005218	Chromosome_1A	2383	2	56	37.51573646663869	0.6678911939140663	0.45045045045045046	56	0	0.16233766233766234	22	0	0.547645125958379	34	0	0.4793863854266539	23	0	unmethylated (<10%)	Q8C206	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN005219	Chromosome_1A	369	1	11	41.734417344173444	0.7516666666666667	0.6493506493506493	11	0	0.6493506493506493	11	0	NA	NA	NA	0.9633197480548351	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005220	Chromosome_1A	1500	1	60	41.666666666666664	0.9217156200073737	1.0712622263623661	60	0	1.0712622263623661	60	0	NA	NA	NA	9.96595481275147	45	0.06666666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005221	Chromosome_1A	26354	23	319	34.60954693784625	0.40543813698402875	88.08881027741575	316	0.9556962025316456	84.68586387434554	48	0.9166666666666666	88.65313653136532	268	0.9626865671641791	0.7058159232072275	71	0	methylated (>=50%)	Q8TEL6	Short transient receptor potential channel 4-associated protein (Trp4-associated protein) (Trpc4-associated protein) (Protein TAP1) (TNF-receptor ubiquitous scaffolding/signaling protein) (Protein TRUSS)	calcium ion transmembrane transport [GO:0070588]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN005222	Chromosome_1A	3028	2	79	35.60105680317041	0.8314286508730954	0.5831643002028397	79	0	0.11668611435239207	29	0	0.7126660187884678	50	0	0.5691519635742743	59	0	unmethylated (<10%)	P08938	Purpurin	NA	hit, no GO BP
GN005223	Chromosome_1A	306	1	21	50.65359477124183	1.0735048446374875	0.4889975550122249	21	0	0.4889975550122249	21	0	NA	NA	NA	0.7403189066059226	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005224	Chromosome_1A	27456	8	385	34.586247086247084	0.4705916082691342	76.97098372257608	351	0.905982905982906	83.17914213624894	50	1	76.18642716692352	301	0.8903654485049833	77.06342311033883	18	0.8888888888888888	methylated (>=50%)	Q8R0A7	Uncharacterized protein KIAA0513	NA	hit, no GO BP
GN005225	Chromosome_1A	5441	6	93	37.805550450284876	0.4785128656132089	90.75785582255084	93	0.989247311827957	92.40506329113924	39	1	89.84350047908016	54	0.9814814814814815	24.169986719787516	29	0.2413793103448276	methylated (>=50%)	Q32PH2	Transmembrane protein 143	NA	hit, no GO BP
GN005226	Chromosome_1A	9598	5	144	34.35090643884143	0.5110960235366162	84.56438509664768	144	0.9305555555555556	86.242299794661193	15	0.9333333333333333	84.3965074473549	129	0.9302325581395349	47.275300778485494	25	0.44	methylated (>=50%)	Q9Y248	DNA replication complex GINS protein PSF2 (GINS complex subunit 2)	DNA replication [GO:0006260]; double-strand break repair via break-induced replication [GO:0000727]	hit with GO BP
GN005227	Chromosome_1A	6218	3	121	39.99678353168221	0.4871381158521346	84.25866836843225	121	0.8429752066115702	68.03933620159803	56	0.6607142857142857	92.84320104098894	65	1	1.2696041822255415	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005228	Chromosome_1A	1081	2	57	45.6059204440333	1.014171439857792	0.9990917347865577	55	0	1.066925315227934	52	0	0	3	0	0.5699088145896657	47	0	unmethylated (<10%)	Q494W8	CHRNA7-FAM7A fusion protein (CHRNA7-DR1) (D-10)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; excitatory postsynaptic potential [GO:0060079]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN005229	Chromosome_1A	540	1	30	42.407407407407405	1.2853062519834972	1.440329218106996	30	0	1.440329218106996	30	0	NA	NA	NA	0.8304498269896193	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005230	Chromosome_1A	513	1	26	44.44444444444444	1.0266317733990147	0.8130081300813008	26	0	0.8130081300813008	26	0	NA	NA	NA	6.044444444444444	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003193	Chromosome_1A	651	1	18	40.86021505376344	0.6867088607594937	1.7	18	0	1.7	18	0	NA	NA	NA	0.9639094373458865	104	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005231	Chromosome_1A	261	1	7	46.74329501915709	0.49579375848032564	27.77777777777778	7	0.42857142857142855	27.77777777777778	7	0.42857142857142855	NA	NA	NA	5.101558809636278	54	0	sparse (10-50%)	P63115	Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter) (Solute carrier family 7 member 10)	D-alanine transmembrane transport [GO:0042941]; D-serine transmembrane transport [GO:0042942]; glycine transport [GO:0015816]; negative regulation of brown fat cell differentiation [GO:1903444]; neutral amino acid transport [GO:0015804]; positive regulation of synaptic transmission, glycinergic [GO:0060094]	hit with GO BP
GN005232	Chromosome_1A	8729	19	55	40.210791614159696	0.15589200640069825	0.42735042735042733	45	0	0.17103762827822122	33	0	1.1945392491467577	12	0	0.7915567282321899	19	0	unmethylated (<10%)	Q9GKT2	Fatty acid hydroxylase domain-containing protein 2	lipid biosynthetic process [GO:0008610]; positive regulation of megakaryocyte differentiation [GO:0045654]; positive regulation of protein phosphorylation [GO:0001934]	hit with GO BP
GN005233	Chromosome_1A	1411	3	45	37.34939759036145	0.9180884904569115	0.7661108607480848	45	0	0.20161290322580644	26	0	1.2224938875305624	19	0	0.6567164179104478	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005234	Chromosome_1A	2854	3	54	39.17309039943938	0.49325801341036024	93.59300028224668	54	1	97.30941704035874	4	1	93.3433734939759	50	1	92.9805615550756	32	1	methylated (>=50%)	Q6DJ25	Mediator of RNA polymerase II transcription subunit 10 (Mediator complex subunit 10)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005235	Chromosome_1A	6412	6	60	35.57392389270119	0.3116570023184715	89.76680384087791	60	0.9833333333333333	89.21933085501858	10	1	89.86160283231413	50	0.98	48.92601431980907	48	0.6041666666666666	methylated (>=50%)	Q5XKA2	Mitochondrial import inner membrane translocase subunit Tim21 (TIM21-like protein, mitochondrial)	protein import into mitochondrial matrix [GO:0030150]	hit with GO BP
GN002094	Chromosome_1A	10901	8	189	37.00577928630401	0.5084741621533575	90.15605153329705	189	0.9894179894179894	92.97091412742382	55	1	89.1566265060241	134	0.9850746268656716	83.16481294236603	32	0.90625	methylated (>=50%)	Q90871	Interferon regulatory factor 8 (IRF-8) (Interferon consensus sequence-binding protein) (ICSBP)	cellular response to type II interferon [GO:0071346]; dendritic cell differentiation [GO:0097028]; immune response [GO:0006955]; immune system process [GO:0002376]; negative regulation of transcription by RNA polymerase II [GO:0000122]; plasmacytoid dendritic cell differentiation [GO:0002273]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of type I interferon production [GO:0032479]	hit with GO BP
GN002081	Chromosome_1A	1774	3	58	37.71138669673055	0.9312841678433076	0.6815203145478375	58	0	0.5250875145857643	25	0	0.809138505473584	33	0	1.1411665257819104	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002082	Chromosome_1A	702	1	38	53.56125356125356	0.7561224489795918	0.8051529790660226	33	0	0.8051529790660226	33	0	NA	NA	NA	0.5851063829787234	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002083	Chromosome_1A	16832	7	380	35.91967680608365	0.7001515972000328	12.785685645549318	378	0.03439153439153439	0.667334000667334	83	0	14.927749926275435	295	0.04406779661016949	0.5730659025787965	47	0	sparse (10-50%)	G3X987	GTPase IMAP family member 9 (Immune-associated nucleotide-binding protein 7) (IAN-7) (Immunity-associated nucleotide-binding protein 7)	NA	hit, no GO BP
GN002084	Chromosome_1A	186	1	8	46.774193548387096	0.8043243243243243	0.37174721189591076	8	0	0.37174721189591076	8	0	NA	NA	NA	0.3919007184846506	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005239	Chromosome_1A	492	1	20	43.292682926829265	0.8684907325684025	0.6825938566552902	20	0	0.6825938566552902	20	0	NA	NA	NA	0.22634676324128564	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005240	Chromosome_1A	174	1	8	45.40229885057471	0.925531914893617	0	8	0	0	8	0	NA	NA	NA	1.710097719869707	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005241	Chromosome_1A	1383	3	31	43.23933477946493	0.4815026954177898	0.5695687550854354	31	0	0.6346328195829556	28	0	0	3	0	4.6239210850801475	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005242	Chromosome_1A	657	1	13	41.55251141552512	0.4601831896551724	0.7889546351084813	13	0	0.7889546351084813	13	0	NA	NA	NA	0.561447286338116	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005243	Chromosome_1A	357	1	4	46.49859943977591	0.20755813953488372	0	4	0	0	4	0	NA	NA	NA	2.560124127230411	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005244	Chromosome_1A	1734	2	9	36.67820069204152	0.1543635446443585	85.52278820375335	9	1	83.51063829787235	5	1	87.56756756756756	4	1	86.73913043478261	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005245	Chromosome_1A	6205	4	153	35.1651893634166	0.7979218303626585	87.83958602846054	153	1	93.57798165137615	15	1	87.36808098212363	138	1	88.2039911308204	43	1	methylated (>=50%)	Q149F1	Pseudouridylate synthase RPUSD2 (EC 5.4.99.-) (EC 5.4.99.28) (EC 5.4.99.42) (RNA pseudouridylate synthase domain-containing protein 2)	enzyme-directed rRNA pseudouridine synthesis [GO:0000455]; mRNA pseudouridine synthesis [GO:1990481]; tRNA pseudouridine synthesis [GO:0031119]	hit with GO BP
GN005246	Chromosome_1A	342	1	5	43.567251461988306	0.3081081081081081	94.47004608294931	5	1	94.47004608294931	5	1	NA	NA	NA	84.42528735632185	32	0.96875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005247	Chromosome_1A	5041	9	43	33.48541955961119	0.3071985737204016	74.2300194931774	43	0.8372093023255814	83.83838383838383	15	0.9333333333333333	69.93795826283136	28	0.7857142857142857	36.23462630085147	41	0.43902439024390244	methylated (>=50%)	Q0MQI8	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (EC 7.1.1.2) (NADH-ubiquinone oxidoreductase 24 kDa subunit)	mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	hit with GO BP
GN002075	Chromosome_1A	8143	10	111	32.85030087191453	0.5076415277663892	79.5368548509157	111	0.8738738738738738	70.49462365591398	44	0.7727272727272727	84.44652031760859	67	0.9402985074626866	23.77384196185286	24	0.25	methylated (>=50%)	Q9BZ19	Ankyrin repeat domain-containing protein 60	NA	hit, no GO BP
GN005248	Chromosome_1A	3563	4	43	34.83019927027786	0.4035872903813834	89.41062176165804	42	1	89.22651933701657	14	1	89.5104895104895	28	1	90.67879181552452	40	1	methylated (>=50%)	Q3T0J3	Large ribosomal subunit protein uL16m (39S ribosomal protein L16, mitochondrial) (L16mt) (MRP-L16)	mitochondrial translation [GO:0032543]	hit with GO BP
GN005249	Chromosome_1A	24439	12	372	34.71500470559352	0.5060865548474641	94.02199295206556	349	1	97.13412304165074	52	1	93.63297669086741	297	1	97.64001408946812	53	1	methylated (>=50%)	Q8WYQ5	Microprocessor complex subunit DGCR8 (DiGeorge syndrome critical region 8)	DNA damage response [GO:0006974]; positive regulation of pre-miRNA processing [GO:2000633]; primary miRNA processing [GO:0031053]	hit with GO BP
GN002073	Chromosome_1A	1416	1	66	44.49152542372882	0.9418973805948337	0.6612784717119765	66	0	0.6612784717119765	66	0	NA	NA	NA	12.968591691995947	37	0.1891891891891892	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002072	Chromosome_1A	1417	4	53	40.15525758645025	0.9293758043758044	0.20584602717167558	53	0	0.26371308016877637	43	0	0	10	0	4.297159504734159	45	0	unmethylated (<10%)	A8JF70	Outer dynein arm protein 1 (Docking complex component 2)	cilium movement involved in cell motility [GO:0060294]; outer dynein arm assembly [GO:0036158]	hit with GO BP
GN002071	Chromosome_1A	1330	3	40	39.849624060150376	0.759392486011191	0.5617977528089888	40	0	0.8448540706605223	24	0	0.1976284584980237	16	0	0.6293266205160478	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002070	Chromosome_1A	6467	5	87	34.374516777485695	0.45542179792488596	73.80867709815078	87	0.8275862068965517	33.08550185873606	21	0.3333333333333333	83.44327176781003	66	0.9848484848484849	0.5191693290734825	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002069	Chromosome_1A	1407	1	60	42.07533759772566	0.9635336414997432	0.7838745800671892	60	0	0.7838745800671892	60	0	NA	NA	NA	0.6660611565243718	68	0	unmethylated (<10%)	Q2YDN1	G protein-coupled receptor 161	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cerebellum development [GO:0021549]; forebrain development [GO:0030900]; limb development [GO:0060173]; negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning [GO:1901621]; regulation of neuron migration [GO:2001222]; skeletal system development [GO:0001501]	hit with GO BP
GN005253	Chromosome_1A	4974	11	174	39.66626457579413	0.8893533589819473	1.129862700228833	174	0	0.8885597926693817	64	0	1.281752505243533	110	0	1.8418201516793067	35	0	unmethylated (<10%)	Q9JMA9	Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) (Amino acid transporter ATB0+) (Colonic system B0+ amino acid transporter CATB0+) (Solute carrier family 6 member 14)	(R)-carnitine transmembrane transport [GO:1902270]; alanine transport [GO:0032328]; amino acid import across plasma membrane [GO:0089718]; beta-alanine transport [GO:0001762]; glycine import across plasma membrane [GO:1903804]; L-leucine import across plasma membrane [GO:1903801]; response to toxic substance [GO:0009636]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN005254	Chromosome_1A	5150	2	165	38.62135922330097	0.8648414838939494	10.081487672377769	164	0	10.442962610145273	152	0	7.4957410562180575	12	0	1.0598682325981095	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005255	Chromosome_1A	1714	3	17	34.13068844807468	0.3408591081371953	82.06521739130434	17	0.8235294117647058	81.23791102514507	12	0.75	83.12655086848635	5	1	90.13342696629213	32	1	methylated (>=50%)	Q5ZKG1	Large ribosomal subunit protein mL51 (39S ribosomal protein L51, mitochondrial) (L51mt) (MRP-L51)	translation [GO:0006412]	hit with GO BP
GN005256	Chromosome_1A	7628	7	184	37.03460933403251	0.7072037890811982	5.459933888065656	180	0.03888888888888889	15.472481827622014	24	0.16666666666666666	4.225352112676056	156	0.019230769230769232	1.4687100893997447	58	0	unmethylated (<10%)	Q9I993	Beta,beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) (Beta-carotene dioxygenase 1) (Beta-carotene oxygenase 1)	beta-carotene metabolic process [GO:1901810]; carotene catabolic process [GO:0016121]; response to retinoic acid [GO:0032526]; retinal metabolic process [GO:0042574]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]	hit with GO BP
GN005257	Chromosome_1A	7731	5	119	36.01086534730307	0.47486366862378215	79.6441737457926	119	0.865546218487395	58.78030859662013	33	0.6060606060606061	85.46535465354654	86	0.9651162790697675	2.280501710376283	35	0	methylated (>=50%)	Q29HG0	Serine/threonine-protein phosphatase Pgam5, mitochondrial (EC 3.1.3.16) (Phosphoglycerate mutase family member 5 homolog)	positive regulation of mitochondrial fission [GO:0090141]	hit with GO BP
GN005258	Chromosome_1A	522	1	24	56.32183908045977	0.6145996860282574	1.0869565217391304	24	0	1.0869565217391304	24	0	NA	NA	NA	0.6208609271523179	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005259	Chromosome_1A	1041	2	37	46.58981748318924	0.6822722924859177	0.411522633744856	37	0	0.32397408207343414	32	0	0.6920415224913494	5	0	0.5599472990777339	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005260	Chromosome_1A	595	2	17	47.89915966386555	0.5798555377207063	0.704225352112676	17	0	0.704225352112676	17	0	NA	NA	NA	2.4196460816179126	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005261	Chromosome_1A	1439	2	34	41.27866574009729	0.5611745139645581	0.4197271773347324	34	0	0.6243496357960457	20	0	0.21164021164021163	14	0	0.3819444444444444	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005262	Chromosome_1A	2276	2	61	39.41124780316345	0.7047798895386614	0.7523322299127294	61	0	0.9950248756218906	15	0	0.6985294117647058	46	0	0.5349794238683128	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005263	Chromosome_1A	345	1	14	55.072463768115945	0.6192307692307693	11.590628853267571	14	0	11.590628853267571	14	0	NA	NA	NA	4.635258358662614	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002059	Chromosome_1A	464	3	5	37.5	0.3274523641496119	6.672369546621043	5	0	7.960199004975125	4	0	3.835616438356164	1	0	11.397849462365592	11	0	unmethylated (<10%)	Q8JFP1	Eukaryotic initiation factor 4A-II (eIF-4A-II) (eIF4A-II) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-2)	NA	hit, no GO BP
GN005264	Chromosome_1A	339	1	3	49.557522123893804	0.14487179487179488	15.238095238095237	3	0	15.238095238095237	3	0	NA	NA	NA	7.700976709241172	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005265	Chromosome_1A	1751	3	17	35.75099942889777	0.30421674433815715	0.7053291536050157	17	0	0.5722460658082976	12	0	0.8665511265164645	5	0	0.4826678367705134	46	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN005266	Chromosome_1A	717	1	6	35.56485355648535	0.26532626125570496	0.6696428571428571	6	0	0.6696428571428571	6	0	NA	NA	NA	1.051840721262209	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005267	Chromosome_1A	603	1	26	51.575456053067995	0.6503235440517671	0.47770700636942676	26	0	0.47770700636942676	26	0	NA	NA	NA	0.42257022122793936	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005268	Chromosome_1A	747	1	22	44.712182061579654	0.5940572585309427	0.35650623885918004	22	0	0.35650623885918004	22	0	NA	NA	NA	0.4963726613211149	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002056	Chromosome_1A	24449	16	709	37.118082539163154	0.8429809816066083	1.2063391941969566	595	0	0.7884362680683311	55	0	1.2476714465190832	540	0	0.7117437722419929	45	0	unmethylated (<10%)	B2RX12	ATP-binding cassette sub-family C member 3 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (Canalicular multispecific organic anion transporter 2) (Multidrug resistance-associated protein 3)	bile acid and bile salt transport [GO:0015721]; canalicular bile acid transport [GO:0015722]; leukotriene transport [GO:0071716]; monoatomic anion transmembrane transport [GO:0098656]; transmembrane transport [GO:0055085]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN002052	Chromosome_1A	2163	2	58	37.81784558483588	0.750322966507177	1.313868613138686	58	0	0.5780346820809249	14	0	1.5625	44	0	0.9397278029812054	40	0	unmethylated (<10%)	Q92887	ATP-binding cassette sub-family C member 2 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (Canalicular multidrug resistance protein) (Canalicular multispecific organic anion transporter 1) (Multidrug resistance-associated protein 2)	bile acid and bile salt transport [GO:0015721]; bilirubin transport [GO:0015723]; heme catabolic process [GO:0042167]; leukotriene transport [GO:0071716]; negative regulation of gene expression [GO:0010629]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]; xenobiotic export from cell [GO:0046618]; xenobiotic metabolic process [GO:0006805]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN005269	Chromosome_1A	2413	3	51	36.09614587650228	0.6510925347865192	0.5608974358974359	50	0	0.718132854578097	12	0	0.5157297576070139	38	0	0.4817618719889883	56	0	unmethylated (<10%)	Q28689	ATP-binding cassette sub-family C member 2 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (Canalicular multidrug resistance protein) (Canalicular multispecific organic anion transporter 1) (Epithelial basolateral chloride conductance regulator) (Multidrug resistance-associated protein 2)	bile acid and bile salt transport [GO:0015721]; leukotriene transport [GO:0071716]	hit with GO BP
GN005270	Chromosome_1A	12778	5	254	37.642823603067775	0.5612045449515294	65.60895940270649	126	0.6349206349206349	34.16435826408126	22	0.2727272727272727	71.97904975682754	104	0.7115384615384616	0.4402054292002935	36	0	methylated (>=50%)	Q174D3	Mediator of RNA polymerase II transcription subunit 19 (Mediator complex subunit 19)	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN005271	Chromosome_1A	6173	6	85	34.14871213348453	0.47258331374387436	73.99923751429661	85	0.7764705882352941	87.32106339468302	14	0.9285714285714286	70.94657919400187	71	0.7464788732394366	70.12401352874859	17	0.7647058823529411	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005272	Chromosome_1A	7121	7	108	32.972897065018955	0.558547527175038	92.51583189407023	82	0.9634146341463414	95.06258692628651	22	1	91.54518950437318	60	0.95	15.259117082533589	39	0.10256410256410256	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005273	Chromosome_1A	6819	9	80	36.808916263381725	0.3503505624991571	89.72972972972973	80	0.95	91.92795196797866	28	0.9642857142857143	88.53410740203194	52	0.9423076923076923	45.05194095133953	34	0.3235294117647059	methylated (>=50%)	Q8GWA1	Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial (EC 1.6.5.9) (Internal alternative NADH dehydrogenase NDA1) (Internal non-phosphorylating NAD(P)H dehydrogenase 1) (AtNDI1) (NADH:ubiquinone reductase (non-electrogenic) NDA1)	cellular response to light stimulus [GO:0071482]	hit with GO BP
GN005274	Chromosome_1A	156	1	3	44.87179487179487	0.43293246993524515	78.91891891891892	3	1	78.91891891891892	3	1	NA	NA	NA	92.54829806807727	18	1	NA	NA	NA	NA	no Swiss-Prot hit
GN002047	Chromosome_1A	3407	5	50	36.01408864103317	0.45499222760562175	83.99727613210759	50	0.88	91.89704480457578	18	1	79.60805084745763	32	0.8125	0.5718642775447961	40	0	methylated (>=50%)	Q5ZKM1	pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 (EC 2.1.1.-) (Protein ftsJ homolog 3) (Putative rRNA methyltransferase 3)	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000466]; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; RNA methylation [GO:0001510]; rRNA methylation [GO:0031167]	hit with GO BP
GN002046	Chromosome_1A	468	1	35	51.282051282051285	1.2080536912751678	0.2079002079002079	35	0	0.2079002079002079	35	0	NA	NA	NA	0.6074766355140186	89	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005276	Chromosome_1A	525	1	21	44	0.8272058823529411	0.9784735812133072	21	0	0.9784735812133072	21	0	NA	NA	NA	5.546942291128338	57	0	unmethylated (<10%)	P47727	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	epithelial cell differentiation [GO:0030855]; glucocorticoid metabolic process [GO:0008211]; ovulation from ovarian follicle [GO:0001542]; phylloquinone catabolic process [GO:0042376]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; prostaglandin catabolic process [GO:1905344]; response to estradiol [GO:0032355]; response to gonadotropin [GO:0034698]; response to lipopolysaccharide [GO:0032496]; response to progesterone [GO:0032570]; response to testosterone [GO:0033574]; steroid catabolic process [GO:0006706]; vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005277	Chromosome_1A	717	1	27	43.09623430962343	0.8147727272727273	0.19029495718363462	26	0	0.19029495718363462	26	0	NA	NA	NA	0.5898123324396782	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005278	Chromosome_1A	346	2	13	40.17341040462428	0.9312629399585921	0.22026431718061673	13	0	0.22026431718061673	13	0	NA	NA	NA	0.4196255648805681	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005279	Chromosome_1A	639	3	13	39.123630672926446	0.5405036111653329	2.366863905325444	13	0	1.9886363636363635	10	0	3.225806451612903	3	0	0.5676442762535477	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005280	Chromosome_1A	531	1	22	41.24293785310734	0.9816806722689075	0.11160714285714286	22	0	0.11160714285714286	22	0	NA	NA	NA	1.1558389796731765	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005281	Chromosome_1A	576	1	16	44.09722222222222	0.5714285714285714	1.10803324099723	16	0	1.10803324099723	16	0	NA	NA	NA	0.700589970501475	69	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN005282	Chromosome_1A	336	1	12	41.36904761904762	1.5112443778110944	0.6147540983606558	12	0	0.6147540983606558	12	0	NA	NA	NA	0.46674445740956827	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018937	Chromosome_1A	270	1	8	46.666666666666664	0.5510204081632653	0	8	0	0	8	0	NA	NA	NA	0.8941877794336811	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002041	Chromosome_1A	1317	1	64	44.039483675018985	1.0022354340071344	0.6127450980392157	64	0	0.6127450980392157	64	0	NA	NA	NA	0.5788712011577424	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005284	Chromosome_1A	1140	1	54	45.08771929824562	0.9486385280384633	0.7868852459016393	54	0	0.7868852459016393	54	0	NA	NA	NA	0.9502262443438914	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005285	Chromosome_1A	38039	20	657	36.01041036830621	0.5343468072991524	89.54558489975754	611	0.9770867430441899	94.51594033343083	137	1	88.4672737079222	474	0.9704641350210971	95.60165975103735	18	1	methylated (>=50%)	P61406	Telomerase-binding protein EST1A (EC 3.1.-.-) (Ever shorter telomeres 1A) (Nonsense mediated mRNA decay factor SMG6) (Smg-6 homolog)	negative regulation of telomere capping [GO:1904354]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; regulation of telomere maintenance [GO:0032204]	hit with GO BP
GN005286	Chromosome_1A	2833	6	94	38.72220261207201	0.8979640007822984	0.9159034138218152	93	0	1.2268008807801196	67	0	0.3076923076923077	26	0	0.6993006993006993	36	0	unmethylated (<10%)	Q28D99	Acidic amino acid decarboxylase GADL1 (Aspartate 1-decarboxylase) (ADC) (EC 4.1.1.11) (Cysteine sulfinic acid decarboxylase) (CSADC) (EC 4.1.1.29) (Glutamate decarboxylase-like protein 1)	NA	hit, no GO BP
GN005287	Chromosome_1A	4823	2	61	37.860252954592575	0.3529505622317957	88.15379286456529	61	0.9836065573770492	88.00917957544463	41	0.975609756097561	88.37412587412588	20	1	80.85224128389596	21	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005288	Chromosome_1A	630	1	30	44.92063492063492	0.9473684210526315	0.42075736325385693	30	0	0.42075736325385693	30	0	NA	NA	NA	0.7583965330444203	52	0	unmethylated (<10%)	Q96S79	Ras-like protein family member 10B (EC 3.6.5.2) (Ras-like protein VTS58635) (Ras-related protein 17) (RRP17)	positive regulation of peptide hormone secretion [GO:0090277]; regulation of systemic arterial blood pressure by atrial natriuretic peptide [GO:0003050]	hit with GO BP
GN005289	Chromosome_1A	4710	5	59	36.00849256900212	0.38789782244556115	84.41687344913151	59	0.9491525423728814	88.63636363636364	13	1	83.45521023765997	46	0.9347826086956522	92.52411575562701	21	1	methylated (>=50%)	O54992	MAP kinase-activated protein kinase 5 (MAPK-activated protein kinase 5) (MAPKAP kinase 5) (MAPKAPK-5) (EC 2.7.11.1)	negative regulation of TOR signaling [GO:0032007]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of telomere maintenance [GO:0032206]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autophosphorylation [GO:0046777]; Ras protein signal transduction [GO:0007265]; regulation of translation [GO:0006417]; stress-induced premature senescence [GO:0090400]	hit with GO BP
GN005290	Chromosome_1A	6577	8	88	36.612437281435305	0.39926600441501103	94.66152999449642	88	0.9886363636363636	96.11419508326725	43	1	93.41072038238306	45	0.9777777777777777	9.875583203732504	25	0.08	methylated (>=50%)	A4QNN3	Ubiquitin carboxyl-terminal hydrolase 30 (EC 3.4.19.12) (Deubiquitinating enzyme 30) (Ubiquitin thioesterase 30) (Ubiquitin-specific-processing protease 30) (Ub-specific protease 30)	mitochondrial fusion [GO:0008053]; negative regulation of mitophagy [GO:1901525]; protein deubiquitination [GO:0016579]; protein K11-linked deubiquitination [GO:0035871]; protein K6-linked deubiquitination [GO:0044313]	hit with GO BP
GN002032	Chromosome_1A	33701	21	993	36.63096050562298	0.8795493324222036	10.683836414830568	973	0.10585817060637205	40.98837209302326	132	0.4090909090909091	6.476062338827223	841	0.05826397146254459	0.6688068485821295	66	0	sparse (10-50%)	P18293	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN002033	Chromosome_1A	3680	3	76	43.45108695652174	0.4399019783635168	0.32546786004882017	76	0	0.4013761467889908	49	0	0.1400560224089636	27	0	0.6229508196721312	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002034	Chromosome_1A	327	1	12	44.95412844036697	0.7304542069992555	0.3875968992248062	12	0	0.3875968992248062	12	0	NA	NA	NA	0.43838285435947394	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005292	Chromosome_1A	4127	5	50	33.12333414102253	0.4449595687331536	31.683168316831683	50	0.24	44.93087557603687	11	0.45454545454545453	26.601855943437915	39	0.1794871794871795	0.6805157593123209	48	0	sparse (10-50%)	P34748	Small ribosomal subunit protein mS23 (28S ribosomal protein S23, mitochondrial)	translation [GO:0006412]	hit with GO BP
GN005293	Chromosome_1A	19110	6	571	35.29042386185243	0.959797826748374	2.4993948196562576	569	0	2.521640948438088	57	0	2.497449902931789	512	0	1.5605493133583022	48	0	unmethylated (<10%)	Q90476	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1)	anatomical structure formation involved in morphogenesis [GO:0048646]; anatomical structure morphogenesis [GO:0009653]; anterior/posterior axis specification [GO:0009948]; anterior/posterior pattern specification [GO:0009952]; cell-cell signaling [GO:0007267]; cerebellar Purkinje cell differentiation [GO:0021702]; cerebellar Purkinje cell-granule cell precursor cell signaling [GO:0021937]; cerebellum development [GO:0021549]; comma-shaped body morphogenesis [GO:0072049]; dorsal spinal cord interneuron posterior axon guidance [GO:0097379]; dorsal/ventral pattern formation [GO:0009953]; ectoderm formation [GO:0001705]; embryonic pattern specification [GO:0009880]; embryonic retina morphogenesis in camera-type eye [GO:0060059]; endoderm formation [GO:0001706]; epithelium development [GO:0060429]; forebrain regionalization [GO:0021871]; gastrulation with mouth forming second [GO:0001702]; head development [GO:0060322]; kidney development [GO:0001822]; lateral motor column neuron migration [GO:0097477]; motor neuron axon guidance [GO:0008045]; negative regulation of DNA-templated transcription [GO:0045892]; nephric duct morphogenesis [GO:0072178]; neuron differentiation [GO:0030182]; paramesonephric duct development [GO:0061205]; pattern specification process [GO:0007389]; positive regulation of anterior head development [GO:2000744]; positive regulation of branching involved in ureteric bud morphogenesis [GO:0090190]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of embryonic development [GO:0040019]; positive regulation of gastrulation [GO:2000543]; positive regulation of nephron tubule epithelial cell differentiation [GO:2000768]; post-embryonic development [GO:0009791]; primitive streak formation [GO:0090009]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; renal vesicle morphogenesis [GO:0072077]; retina layer formation [GO:0010842]; S-shaped body morphogenesis [GO:0072050]; spinal cord association neuron differentiation [GO:0021527]; transcription by RNA polymerase II [GO:0006366]; ureteric bud development [GO:0001657]; urogenital system development [GO:0001655]	hit with GO BP
GN005294	Chromosome_1A	9859	9	271	37.955167866923624	0.7638647978328771	29.168913194177	271	0.2915129151291513	53.535353535353536	75	0.64	20.640532390558388	196	0.15816326530612246	0.6966434452184928	68	0	sparse (10-50%)	Q3U435	Matrix metalloproteinase-25 (MMP-25) (EC 3.4.24.-)	collagen catabolic process [GO:0030574]; extracellular matrix organization [GO:0030198]; hard palate development [GO:0060022]; proteolysis [GO:0006508]	hit with GO BP
GN005295	Chromosome_1A	1332	1	17	43.54354354354354	0.27651390262666226	2.027027027027027	8	0	2.027027027027027	8	0	NA	NA	NA	6.059519541054141	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005296	Chromosome_1A	471	1	25	45.010615711252655	1.048344017094017	0.5532503457814661	25	0	0.5532503457814661	25	0	NA	NA	NA	0.43103448275862066	49	0	unmethylated (<10%)	Q24155	Protein trunk	negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of cell differentiation [GO:0045596]; terminal region determination [GO:0007362]; torso signaling pathway [GO:0008293]	hit with GO BP
GN005297	Chromosome_1A	180	1	7	46.111111111111114	0.75	0.47619047619047616	7	0	0.47619047619047616	7	0	NA	NA	NA	0.3374578177727784	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005298	Chromosome_1A	702	2	11	45.15669515669516	0.30762489044697633	0	11	0	0	11	0	NA	NA	NA	3.239740820734341	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005299	Chromosome_1A	1050	1	23	40.76190476190476	0.5352393617021277	1.1904761904761905	18	0	1.1904761904761905	18	0	NA	NA	NA	0.6881564650488954	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005300	Chromosome_1A	6689	2	202	36.462849454328	0.909082223762203	0.7080175508575988	202	0	0.8781558726673985	49	0	0.6702412868632708	153	0	0.4519774011299435	67	0	unmethylated (<10%)	Q8BZT7	Group 3 secretory phospholipase A2 (EC 3.1.1.4) (Group III secretory phospholipase A2) (GIII sPLA2) (sPLA2-III) (Phosphatidylcholine 2-acylhydrolase 3)	acrosome assembly [GO:0001675]; arachidonate secretion [GO:0050482]; cell development [GO:0048468]; cell maturation [GO:0048469]; cilium assembly [GO:0060271]; high-density lipoprotein particle remodeling [GO:0034375]; lipoxygenase pathway [GO:0019372]; low-density lipoprotein particle remodeling [GO:0034374]; macrophage activation [GO:0042116]; mast cell degranulation [GO:0043303]; negative regulation of amyloid-beta clearance [GO:1900222]; negative regulation of gene expression [GO:0010629]; negative regulation of neuron apoptotic process [GO:0043524]; phosphatidic acid metabolic process [GO:0046473]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylethanolamine metabolic process [GO:0046337]; phosphatidylglycerol metabolic process [GO:0046471]; phosphatidylinositol metabolic process [GO:0046488]; phosphatidylserine metabolic process [GO:0006658]; phospholipid metabolic process [GO:0006644]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of histamine secretion by mast cell [GO:1903595]; positive regulation of macrophage derived foam cell differentiation [GO:0010744]; positive regulation of mast cell differentiation [GO:0060376]; positive regulation of neuron projection development [GO:0010976]; positive regulation of prostaglandin biosynthetic process [GO:0031394]; positive regulation of prostaglandin secretion [GO:0032308]; production of molecular mediator involved in inflammatory response [GO:0002532]; regulation of endocytic recycling [GO:2001135]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN005301	Chromosome_1A	7869	4	125	34.13394332189605	0.5483324116647564	58.2493921500521	124	0.5645161290322581	52.666227781435154	30	0.36666666666666664	59.44085417252037	94	0.6276595744680851	1.5957446808510638	8	0	methylated (>=50%)	Q9CWK3	CD2 antigen cytoplasmic tail-binding protein 2 (CD2 cytoplasmic domain-binding protein 2) (CD2 tail-binding protein 2)	NA	hit, no GO BP
GN005302	Chromosome_1A	1727	2	29	35.437174290677476	0.535234899328859	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN005303	Chromosome_1A	50130	62	748	36.09814482345901	0.4583315406158083	86.76781033242861	728	0.9134615384615384	91.39432176656152	167	0.9640718562874252	85.7256551645728	561	0.8983957219251337	78.5920925747348	36	0.6944444444444444	methylated (>=50%)	A5YKK6	CCR4-NOT transcription complex subunit 1 (CCR4-associated factor 1) (Negative regulator of transcription subunit 1 homolog) (NOT1H) (hNOT1)	miRNA-mediated post-transcriptional gene silencing [GO:0035195]; negative regulation of intracellular estrogen receptor signaling pathway [GO:0033147]; negative regulation of retinoic acid receptor signaling pathway [GO:0048387]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of translation [GO:0017148]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of cytoplasmic mRNA processing body assembly [GO:0010606]; positive regulation of mRNA catabolic process [GO:0061014]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; regulation of stem cell population maintenance [GO:2000036]; trophectodermal cell differentiation [GO:0001829]	hit with GO BP
GN005304	Chromosome_1A	2331	4	46	35.56413556413556	0.6270599656136329	66.97451052826007	46	0.6739130434782609	53.95580898075552	28	0.5714285714285714	80.98159509202453	18	0.8333333333333334	2.4498886414253898	38	0	methylated (>=50%)	P83310	(R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase (RdpA) (EC 1.14.11.44) ((R)-dichlorprop/(R)-mecoprop dioxygenase) (Alpha-ketoglutarate-dependent dioxygenase) (Dichlorprop/alpha-ketoglutarate-dioxygenase) (Mecoprop/alpha-ketoglutarate-dioxygenase)	NA	hit, no GO BP
GN005305	Chromosome_1A	4197	8	58	33.857517274243506	0.48394446167426103	66.95941853422168	58	0.6206896551724138	37.85488958990536	13	0.46153846153846156	73.87556221889055	45	0.6666666666666666	62.12266411116435	58	0.7586206896551724	methylated (>=50%)	Q9BUN8	Derlin-1 (Degradation in endoplasmic reticulum protein 1) (DERtrin-1) (Der1-like protein 1)	cellular response to misfolded protein [GO:0071218]; endoplasmic reticulum unfolded protein response [GO:0030968]; ERAD pathway [GO:0036503]; establishment of protein localization [GO:0045184]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein destabilization [GO:0031648]; response to unfolded protein [GO:0006986]; retrograde protein transport, ER to cytosol [GO:0030970]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN005306	Chromosome_1A	3893	9	58	35.19136912406884	0.4839953614092399	89.5355673133451	58	0.9655172413793104	92.73542600896862	41	1	83.44709897610922	17	0.8823529411764706	89.63328631875882	23	0.9130434782608695	methylated (>=50%)	Q6DDI6	TBC1 domain family member 31	cilium assembly [GO:0060271]	hit with GO BP
GN005307	Chromosome_1A	903	1	24	47.50830564784053	0.47215686274509805	95.49393414211438	24	1	95.49393414211438	24	1	NA	NA	NA	91.15646258503402	10	1	methylated (>=50%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005308	Chromosome_1A	7285	10	118	37.21345229924503	0.47678552610415037	89.98795543510991	118	0.9745762711864406	94.02232625135038	51	1	87.08926261319534	67	0.9552238805970149	91.50119142176331	21	1	methylated (>=50%)	Q6DEY8	TBC1 domain family member 31	cilium assembly [GO:0060271]	hit with GO BP
GN005309	Chromosome_1A	1014	1	36	45.562130177514796	0.6841079460269865	40.06810442678774	36	0.3055555555555556	40.06810442678774	36	0.3055555555555556	NA	NA	NA	0.9950248756218906	75	0	sparse (10-50%)	Q6ZFT5	Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthase 4)	5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]	hit with GO BP
GN005310	Chromosome_1A	14234	8	234	33.74315020373753	0.580706508852631	79.76473787992113	234	0.8333333333333334	82.20858895705521	38	0.868421052631579	79.35335239911026	196	0.826530612244898	80.27916964924839	39	0.8717948717948718	methylated (>=50%)	Q3V2J0	CBY1-interacting BAR domain-containing protein 2 (Protein FAM92B)	cilium assembly [GO:0060271]	hit with GO BP
GN005311	Chromosome_1A	10436	11	163	35.60751245688003	0.4963892843730002	82.27618291160785	159	0.8867924528301887	93.4174437739989	36	0.9722222222222222	79.37052932761087	123	0.8617886178861789	84.95469718645684	45	0.9555555555555556	methylated (>=50%)	Q6PFJ7	Sphingomyelin phosphodiesterase 4 (EC 3.1.4.12) (Neutral sphingomyelinase 3) (nSMase-3) (nSMase3) (Neutral sphingomyelinase III)	cellular response to tumor necrosis factor [GO:0071356]; ceramide biosynthetic process [GO:0046513]; glycerophospholipid catabolic process [GO:0046475]; sphingomyelin catabolic process [GO:0006685]	hit with GO BP
GN010793	Chromosome_1A	1011	1	27	42.23541048466865	0.5988810881965775	0.5309734513274337	27	0	0.5309734513274337	27	0	NA	NA	NA	0.6293266205160478	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002019	Chromosome_1A	1140	1	37	42.45614035087719	0.7206806998359759	0.8150470219435737	37	0	0.8150470219435737	37	0	NA	NA	NA	14.516834280717097	29	0.034482758620689655	unmethylated (<10%)	Q5BIR5	Serpin B8	NA	hit, no GO BP
GN005313	Chromosome_1A	4043	2	109	37.22483304476874	0.7782496900684145	0.5524861878453039	109	0	0.5967336683417085	62	0	0.49443757725587145	47	0	0.6811301715438951	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005314	Chromosome_1A	464	2	9	41.5948275862069	0.49821045096635647	85.99562363238512	9	1	85.75129533678756	8	1	87.32394366197182	1	1	87.06319702602231	20	0.95	methylated (>=50%)	Q8IYL2	Probable tRNA (uracil-O(2)-)-methyltransferase (EC 2.1.1.211) (Methyltransferase-like protein 19)	tRNA methylation [GO:0030488]	hit with GO BP
GN002017	Chromosome_1A	3763	7	95	33.03215519532288	0.9474017576033837	0.8547008547008547	95	0	0.8339651250947687	51	0	0.8730691739422431	44	0	0.461716044632551	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002016	Chromosome_1A	2385	3	66	37.861635220125784	0.7722005827928927	0.42483660130718953	66	0	0.4794520547945205	35	0	0.375	31	0	0.5392450569203115	57	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN005316	Chromosome_1A	3258	3	84	39.93247391037446	0.6738697921796514	0.4189108318372232	82	0	0.34756703078450846	45	0	0.5271084337349398	37	0	0.4816112084063047	39	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN002014	Chromosome_1A	1129	2	26	44.46412754650133	0.46666984626635505	0.41841004184100417	26	0	0.34443168771526983	18	0	0.6172839506172839	8	0	0.9560229445506692	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002013	Chromosome_1A	5058	7	152	37.702649268485565	0.8458268423415097	0.5895039539899353	152	0	0.43494019572308806	67	0	0.6911344137273594	85	0	2.6143790849673203	64	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN005318	Chromosome_1A	6406	9	190	36.49703403059632	0.8909198842596151	0.6819181698196216	190	0	0.7881462799495587	82	0	0.625	108	0	0.5914972273567468	48	0	unmethylated (<10%)	P05099	Matrilin-1 (Cartilage matrix protein)	NA	hit, no GO BP
GN002011	Chromosome_1A	9001	10	254	39.54005110543273	0.72207223710142	1.3905930470347647	246	0	1.1415525114155252	116	0	1.5587529976019185	130	0	0.9381663113006397	39	0	unmethylated (<10%)	P13944	Collagen alpha-1(XII) chain (Fibrochimerin)	endodermal cell differentiation [GO:0035987]	hit with GO BP
GN005319	Chromosome_1A	12603	9	171	35.301118781242565	0.4376007901173602	86.2159894522354	163	0.950920245398773	95.5960516324981	27	1	84.45772843723313	136	0.9411764705882353	0.4768392370572207	36	0	methylated (>=50%)	O61492	Flotillin-2	cell adhesion [GO:0007155]; melanotic encapsulation of foreign target [GO:0035011]; positive regulation of filopodium assembly [GO:0051491]; protein localization to plasma membrane [GO:0072659]; regulation of myoblast differentiation [GO:0045661]	hit with GO BP
GN001981	Chromosome_1A	4279	7	47	32.18041598504323	0.4246366223828788	73.60343769183548	47	0.8297872340425532	48.74551971326165	9	0.4444444444444444	78.74074074074075	38	0.9210526315789473	56.084840055632824	43	0.6046511627906976	methylated (>=50%)	Q9JM76	Actin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit) (p21-ARC)	Arp2/3 complex-mediated actin nucleation [GO:0034314]; regulation of synaptic vesicle endocytosis [GO:1900242]	hit with GO BP
GN005321	Chromosome_1A	984	3	10	32.21544715447155	0.3945469125902165	87.83977110157367	10	1	89.78102189781022	2	1	87.36654804270462	8	1	79.30622009569377	23	0.8695652173913043	methylated (>=50%)	Q4PF70	GPN-loop GTPase 3 (EC 3.6.5.-)	mitotic sister chromatid cohesion [GO:0007064]; protein import into nucleus [GO:0006606]	hit with GO BP
GN005322	Chromosome_1A	13026	16	164	33.60202671579917	0.4483795475200497	89.74815962805114	163	0.9325153374233128	91.58415841584159	37	0.9459459459459459	89.36628287934101	126	0.9285714285714286	56.76144244105409	50	0.5	methylated (>=50%)	Q1RMV0	Peroxisomal targeting signal 1 receptor (PTS1 receptor) (PTS1R) (PTS1-BP) (Peroxin-5) (Peroxisomal C-terminal targeting signal import receptor) (Peroxisome receptor 1)	cellular response to reactive oxygen species [GO:0034614]; negative regulation of protein-containing complex assembly [GO:0031333]; pexophagy [GO:0000425]; protein import into peroxisome matrix [GO:0016558]; protein import into peroxisome matrix, docking [GO:0016560]; protein import into peroxisome matrix, receptor recycling [GO:0016562]; protein import into peroxisome matrix, substrate release [GO:0044721]; protein import into peroxisome matrix, translocation [GO:0016561]; protein import into peroxisome membrane [GO:0045046]; protein targeting to peroxisome [GO:0006625]; protein tetramerization [GO:0051262]	hit with GO BP
GN005323	Chromosome_1A	1108	2	32	38.898916967509024	0.7641708694340273	0.5549389567147613	32	0	0.6203473945409429	29	0	0	3	0	0.44905008635578586	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001985	Chromosome_1A	705	1	36	47.09219858156028	0.9215686274509803	0.24154589371980675	33	0	0.24154589371980675	33	0	NA	NA	NA	1.1497923985946983	47	0	unmethylated (<10%)	A0NLY7	Isatin hydrolase (EC 3.5.2.20) (Isatin amidohydrolase) (Isatin hydrolase isoform b) (IH-b)	NA	hit, no GO BP
GN001986	Chromosome_1A	9525	5	293	38.6246719160105	0.8247708612731761	1.8483511867254778	293	0	0.5471956224350205	49	0	2.0843672456575684	244	0	0.7717157214644652	82	0	unmethylated (<10%)	A0NLY7	Isatin hydrolase (EC 3.5.2.20) (Isatin amidohydrolase) (Isatin hydrolase isoform b) (IH-b)	NA	hit, no GO BP
GN001987	Chromosome_1A	1756	5	37	33.65603644646925	0.7583099906629318	0.3440366972477064	37	0	0.15384615384615385	19	0	0.5319148936170213	18	0	0.4154549231408392	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001988	Chromosome_1A	345	1	3	40.57971014492754	0.21477484955384935	10.429447852760736	3	0	10.429447852760736	3	0	NA	NA	NA	2.26537216828479	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001991	Chromosome_1A	15002	10	415	36.20850553259565	0.8449185973479743	0.6911846239142487	410	0	0.5825242718446602	52	0	0.7051950761527227	358	0	0.7630675314765357	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001989	Chromosome_1A	3824	4	91	35.17259414225941	0.769593467885688	0.5969011938023876	88	0	0.492831541218638	19	0	0.6380716058135413	69	0	0.6093845216331505	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001990	Chromosome_1A	7270	8	234	38.95460797799175	0.8484519012089534	0.5623845103237728	233	0	0.4728992360858494	42	0	0.5877500515570221	191	0	0.6200396825396826	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005324	Chromosome_1A	5604	9	144	38.15132048536759	0.706836989958587	0.9727866026351435	144	0	0.7831325301204819	65	0	1.1039366798583627	79	0	0.6932409012131716	44	0	unmethylated (<10%)	A0JMP0	Protein-glucosylgalactosylhydroxylysine glucosidase (EC 3.2.1.107) (Acid trehalase-like protein 1)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN001993	Chromosome_1A	1520	4	41	34.53947368421053	0.9051561365286855	0.6788290199406024	41	0	0.6982156710628394	24	0	0.6554307116104869	17	0	0.5619834710743802	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001994	Chromosome_1A	9559	9	253	36.0707186944241	0.8148119322929301	0.6125080593165699	250	0	0.6506180871828237	92	0	0.5899705014749262	158	0	1.650825412706353	61	0	unmethylated (<10%)	Q9QYS2	Metabotropic glutamate receptor 3 (mGluR3)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; cellular response to stress [GO:0033554]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; gene expression [GO:0010467]; modulation of chemical synaptic transmission [GO:0050804]; postsynaptic modulation of chemical synaptic transmission [GO:0099170]; regulation of sensory perception of pain [GO:0051930]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of pain [GO:0019233]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN005325	Chromosome_1A	15908	9	388	34.87553432235353	0.8022459701213188	4.009406906045658	378	0.06084656084656084	0.7016005262003947	109	0	5.181387399984463	269	0.08550185873605948	0.5633802816901409	41	0	unmethylated (<10%)	O00222	Metabotropic glutamate receptor 8 (mGluR8)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; regulation of synaptic transmission, glutamatergic [GO:0051966]; visual perception [GO:0007601]	hit with GO BP
GN005326	Chromosome_1A	1525	3	35	34.42622950819672	0.7746059849650249	0.4646360351058338	35	0	0.41736227045075125	22	0	0.5412719891745602	13	0	0.4302231782737295	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005327	Chromosome_1A	3386	4	95	37.83225044300059	0.7842396286399719	1.5728476821192052	95	0	1.2470771628994544	34	0	1.751388295600171	61	0	0.5065123010130246	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005328	Chromosome_1A	1218	1	43	41.54351395730706	0.819047619047619	1.1933174224343674	43	0	1.1933174224343674	43	0	NA	NA	NA	1.8431372549019607	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005329	Chromosome_1A	8452	5	108	34.08660672030289	0.44475757531463317	91.4024056861673	108	1	91.14349775784753	17	1	91.43835616438356	91	1	87.68545994065282	37	1	methylated (>=50%)	Q5PQ76	Uncharacterized protein C1orf50 homolog	NA	hit, no GO BP
GN005330	Chromosome_1A	1086	2	50	43.370165745856355	0.9790840245221781	0.4826254826254826	50	0	0.4930966469428008	49	0	0	1	0	0.6719367588932806	33	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005331	Chromosome_1A	282	1	6	41.13475177304964	0.5502439024390244	1.1049723756906078	6	0	1.1049723756906078	6	0	NA	NA	NA	9.611829944547136	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005332	Chromosome_1A	2541	2	79	36.481700118063756	0.9350789096126255	0.5705780203423468	79	0	0.6820119352088662	47	0	0.41543026706231456	32	0	0.9206798866855525	94	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005333	Chromosome_1A	1155	2	33	40.43290043290043	0.6993321346005651	0.46153846153846156	33	0	0.43431053203040176	31	0	0.9259259259259259	2	0	0.6984126984126984	61	0	unmethylated (<10%)	P21731	Thromboxane A2 receptor (TXA2-R) (Prostanoid TP receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cellular response to lipopolysaccharide [GO:0071222]; G protein-coupled receptor signaling pathway [GO:0007186]; inflammatory response [GO:0006954]; negative regulation of cell migration involved in sprouting angiogenesis [GO:0090051]; positive regulation of angiogenesis [GO:0045766]; positive regulation of blood coagulation [GO:0030194]; positive regulation of blood pressure [GO:0045777]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of vasoconstriction [GO:0045907]; response to ethanol [GO:0045471]; response to nutrient [GO:0007584]; response to testosterone [GO:0033574]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN002003	Chromosome_1A	1826	3	65	38.0065717415115	0.9883832285464462	0.7791327913279132	65	0	0.7619047619047619	25	0	0.7886435331230284	40	0	0.5035971223021583	67	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005334	Chromosome_1A	2628	2	89	36.757990867579906	1.00258907444875	1.095617529880478	89	0	0.8470353761833582	47	0	1.261201460338533	42	0	0.4922067268252666	51	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005335	Chromosome_1A	504	1	14	42.65873015873016	0.6500829187396352	0.24937655860349128	14	0	0.24937655860349128	14	0	NA	NA	NA	0.5707762557077626	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005336	Chromosome_1A	341	2	14	39.589442815249264	1.0483091787439613	0.847457627118644	14	0	0.847457627118644	14	0	NA	NA	NA	0.6255212677231026	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005337	Chromosome_1A	552	1	12	44.38405797101449	0.4416	0.8403361344537815	12	0	0.8403361344537815	12	0	NA	NA	NA	0.56657223796034	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005338	Chromosome_1A	11155	11	331	37.382339757956075	0.849354605930407	0.727549889135255	322	0	0.5868544600938967	58	0	0.7578309195015157	264	0	1.45	80	0	unmethylated (<10%)	A3DH97	Anti-sigma-I factor RsgI6 (Endo-1,4-beta-xylanase) (EC 3.2.1.8)	xylan catabolic process [GO:0045493]	hit with GO BP
GN005339	Chromosome_1A	2497	4	85	40.849018822587105	0.816213908843391	0.6215722120658135	85	0	0.6235385814497272	79	0	0.591715976331361	6	0	0.6091006807595843	62	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN002008	Chromosome_1A	9818	11	301	35.11916887349766	0.9959836677468332	1.3049844038449296	301	0	1.0313708637730985	46	0	1.3525631445224928	255	0	0.7282658170232135	71	0	unmethylated (<10%)	P97814	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1)	NA	hit, no GO BP
GN001976	Chromosome_1A	2620	4	60	39.80916030534351	0.5786006109904671	94.14788453934361	60	1	94.00921658986175	45	1	94.45145018915511	15	1	64.08352668213458	27	0.7777777777777778	methylated (>=50%)	O18973	Rab5 GDP/GTP exchange factor (Rabex-5)	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN001975	Chromosome_1A	8238	4	85	35.95532896334062	0.32083187288234605	78.47826086956522	84	0.9047619047619048	79.8780487804878	9	0.8888888888888888	78.38123415046492	75	0.9066666666666666	68.91105569409808	19	0.7894736842105263	methylated (>=50%)	Q9UJ41	Rab5 GDP/GTP exchange factor (RAP1) (Rabaptin-5-associated exchange factor for Rab5) (Rabex-5)	dendritic transport [GO:0098935]; endosomal transport [GO:0016197]; protein targeting to membrane [GO:0006612]	hit with GO BP
GN005340	Chromosome_1A	1432	6	24	34.07821229050279	0.5777396742145343	25.40983606557377	24	0.20833333333333334	14.516129032258064	5	0.2	28.189300411522634	19	0.21052631578947367	55.84	20	0.65	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005341	Chromosome_1A	6842	6	90	33.265127155802396	0.4777339870903674	53.04521466267294	90	0.5777777777777777	90.10989010989012	5	1	51.54348471356486	85	0.5529411764705883	0.5490196078431373	40	0	methylated (>=50%)	Q8VDP6	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (EC 2.7.8.11) (Phosphatidylinositol synthase) (PI synthase) (PtdIns synthase)	CDP-diacylglycerol metabolic process [GO:0046341]; phosphatidylinositol biosynthetic process [GO:0006661]; phospholipid biosynthetic process [GO:0008654]	hit with GO BP
GN005342	Chromosome_1A	540	1	34	58.333333333333336	0.932263633593988	1.062959934587081	34	0	1.062959934587081	34	0	NA	NA	NA	0.603448275862069	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005343	Chromosome_1A	916	3	22	46.506550218340614	0.4443366480717924	2.696629213483146	22	0	3.236245954692557	15	0	1.4705882352941178	7	0	1.5497869043006587	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005344	Chromosome_1A	159	1	5	47.79874213836478	0.5915178571428571	0.7299270072992701	5	0	0.7299270072992701	5	0	NA	NA	NA	1.1149228130360205	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001970	Chromosome_1A	35891	9	479	35.44899835613385	0.4330953228002949	78.32708652272608	478	0.9393305439330544	75.2716671084018	53	0.9433962264150944	78.66502506375869	425	0.9388235294117647	57.80474351902923	49	0.8163265306122449	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001969	Chromosome_1A	5180	7	91	35.63706563706564	0.5687328446897717	88.18737270875764	90	0.9777777777777777	93.90096618357488	41	1	85.66088117489987	49	0.9591836734693877	1.32404181184669	59	0	methylated (>=50%)	P41824	Y-box factor homolog (APY1)	NA	hit, no GO BP
GN005345	Chromosome_1A	4740	3	87	40.10548523206751	0.45649574920297553	78.93279637553486	87	0.8275862068965517	88.64864864864865	7	1	77.93505412156536	80	0.8125	86.64220183486239	37	0.972972972972973	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005346	Chromosome_1A	1110	1	50	42.792792792792795	0.9893048128342246	0.44814340588988477	50	0	0.44814340588988477	50	0	NA	NA	NA	0.7751937984496124	47	0	unmethylated (<10%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN005347	Chromosome_1A	927	1	30	41.10032362459547	0.7663690476190477	0.6108202443280978	30	0	0.6108202443280978	30	0	NA	NA	NA	0.7376185458377239	61	0	unmethylated (<10%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN005348	Chromosome_1A	1041	1	42	40.345821325648416	0.9925313840775465	0.8340283569641368	42	0	0.8340283569641368	42	0	NA	NA	NA	0.6874241811564901	39	0	unmethylated (<10%)	A0A7M7H6R7	Lewis-type alpha-(1,3)-fucosyltransferase (EC 2.4.1.152) (Fucosyltransferase C) (AmFucTC)	N-glycan processing [GO:0006491]	hit with GO BP
GN005349	Chromosome_1A	1071	1	40	39.682539682539684	0.9487531558665899	0.4934210526315789	40	0	0.4934210526315789	40	0	NA	NA	NA	0.5009633911368016	52	0	unmethylated (<10%)	Q7QF91	Lewis-type alpha-(1,3)-fucosyltransferase (EC 2.4.1.152) (Fucosyltransferase C) (AgFucTC)	N-glycan processing [GO:0006491]	hit with GO BP
GN005350	Chromosome_1A	3464	3	131	39.23210161662818	0.9852061884767194	3.8461538461538463	131	0	0.18450184501845018	14	0	4.220045214770158	117	0	0.5402160864345739	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005351	Chromosome_1A	475	2	17	37.05263157894737	1.0493827160493827	0.33557046979865773	17	0	0.15360983102918588	13	0	0.823045267489712	4	0	0.3248862897985705	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005352	Chromosome_1A	2049	1	66	36.84724255734505	0.9498503940326183	0.410958904109589	66	0	0.410958904109589	66	0	NA	NA	NA	0.7313317936874519	59	0	unmethylated (<10%)	Q9DGB6	Toll-like receptor 2 type-2	detection of bacterial lipoprotein [GO:0042494]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN005353	Chromosome_1A	2115	1	71	36.87943262411348	0.9875118371212122	0.6541778174249182	71	0	0.6541778174249182	71	0	NA	NA	NA	0.5930318754633062	31	0	unmethylated (<10%)	Q0ZUL9	Toll-like receptor 6 (CD antigen CD286)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; immune response [GO:0006955]; inflammatory response [GO:0006954]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN005354	Chromosome_1A	516	1	15	47.093023255813954	0.5247457627118645	NA	0	NA	NA	NA	NA	NA	NA	NA	1.9230769230769231	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005355	Chromosome_1A	417	1	23	52.278177458033575	0.8228380233356212	2.840909090909091	12	0	2.840909090909091	12	0	NA	NA	NA	3.424260011607661	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001956	Chromosome_1A	1206	1	49	40.13266998341625	1.0090671584447517	0.7311586051743532	49	0	0.7311586051743532	49	0	NA	NA	NA	0.5584512285927029	47	0	unmethylated (<10%)	Q9DGB6	Toll-like receptor 2 type-2	detection of bacterial lipoprotein [GO:0042494]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN001957	Chromosome_1A	463	1	17	43.196544276457885	0.7890726817042607	0	17	0	0	17	0	NA	NA	NA	0.43037196434060865	58	0	unmethylated (<10%)	Q9Y2C9	Toll-like receptor 6 (CD antigen CD286)	activation of NF-kappaB-inducing kinase activity [GO:0007250]; antibacterial innate immune response [GO:0140367]; cellular response to amyloid-beta [GO:1904646]; cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; defense response to bacterium [GO:0042742]; detection of diacyl bacterial lipopeptide [GO:0042496]; immune response [GO:0006955]; inflammatory response [GO:0006954]; innate immune response [GO:0045087]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide metabolic process [GO:0046209]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of macrophage activation [GO:0043032]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; signal transduction [GO:0007165]; toll-like receptor signaling pathway [GO:0002224]; toll-like receptor TLR6:TLR2 signaling pathway [GO:0038124]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]	hit with GO BP
GN005357	Chromosome_1A	4453	6	74	35.481697731866156	0.5284832660811773	86.7312552653749	74	0.9459459459459459	87.71266540642722	10	1	86.60820099549656	64	0.9375	92.05882352941177	40	1	methylated (>=50%)	Q7Z7E8	Ubiquitin-conjugating enzyme E2 Q1 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme Q1) (Protein NICE-5) (Ubiquitin carrier protein Q1) (Ubiquitin-protein ligase Q1)	protein polyubiquitination [GO:0000209]	hit with GO BP
GN005358	Chromosome_1A	9187	9	137	37.36802002830086	0.43113548671741836	85.75503089843131	128	0.796875	93.80413057961358	30	1	83.24324324324324	98	0.7346938775510204	87.42310321257689	25	1	methylated (>=50%)	Q8CHP0	Zinc finger CCCH domain-containing protein 3 (Smad-interacting CPSF-like factor)	mRNA 3'-end processing [GO:0031124]; positive regulation of activin receptor signaling pathway [GO:0032927]	hit with GO BP
GN005359	Chromosome_1A	969	1	56	49.12280701754386	0.9580508474576271	1.0423452768729642	47	0	1.0423452768729642	47	0	NA	NA	NA	1.3028030003947888	61	0	unmethylated (<10%)	Q4U1U2	Transcription factor MafA	insulin secretion [GO:0030073]; regulation of transcription by RNA polymerase II [GO:0006357]; response to glucose [GO:0009749]	hit with GO BP
GN005360	Chromosome_1A	3370	3	80	36.053412462908014	0.7323579426609368	92.46786166938259	80	1	93.83802816901408	13	1	92.31079717457114	67	1	83.05785123966942	9	0.8888888888888888	methylated (>=50%)	Q5R9W5	WW domain-containing oxidoreductase (EC 1.1.1.-)	cellular response to transforming growth factor beta stimulus [GO:0071560]; negative regulation of Wnt signaling pathway [GO:0030178]	hit with GO BP
GN005361	Chromosome_1A	192	1	11	52.083333333333336	0.8451380552220888	91.04166666666667	11	1	91.04166666666667	11	1	NA	NA	NA	79.84705353126405	34	0.8823529411764706	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001954	Chromosome_1A	6191	5	38	35.90696171862381	0.20052984106472824	63.40018231540565	36	0.7222222222222222	77.99043062200957	10	1	59.96621621621622	26	0.6153846153846154	65.66397652237711	21	0.7142857142857143	methylated (>=50%)	Q6GNG3	Protein disulfide-isomerase TMX3 (EC 5.3.4.1) (Thioredoxin domain-containing protein 10) (Thioredoxin-related transmembrane protein 3)	NA	hit, no GO BP
GN005362	Chromosome_1A	624	1	18	42.62820512820513	0.6378918673330305	48.06828391734052	18	0.5	48.06828391734052	18	0.5	NA	NA	NA	16.867469879518072	30	0.06666666666666667	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005363	Chromosome_1A	750	1	14	44.93333333333333	0.36984853821768227	77.71428571428571	14	0.9285714285714286	77.71428571428571	14	0.9285714285714286	NA	NA	NA	25.056947608200456	11	0.09090909090909091	methylated (>=50%)	Q9U8W8	Techylectin-5A	cell-cell adhesion [GO:0098609]	hit with GO BP
GN001952	Chromosome_1A	5572	3	77	34.44005743000718	0.46848582129481003	79.76387738193868	77	0.8961038961038961	76.7175572519084	5	0.8	79.93867717915025	72	0.9027777777777778	80.49171566007483	22	0.9090909090909091	methylated (>=50%)	Q96JJ7	Protein disulfide-isomerase TMX3 (EC 5.3.4.1) (Thioredoxin domain-containing protein 10) (Thioredoxin-related transmembrane protein 3)	NA	hit, no GO BP
GN005364	Chromosome_1A	14777	30	426	38.41104419029573	0.7816751560245467	0.6284038542103059	426	0	0.44492382364837535	175	0	0.7748600947051227	251	0	47.95127353266888	17	0.5294117647058824	unmethylated (<10%)	A7T1N0	Transient receptor potential cation channel subfamily M member-like 2 (nvTRPM2)	calcium ion transmembrane transport [GO:0070588]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN001951	Chromosome_1A	13512	19	183	34.85790408525755	0.4493555144408416	87.88030758943498	182	0.9615384615384616	87.4180865006553	42	0.9761904761904762	87.98966408268734	140	0.9571428571428572	44.254835039817976	19	0.42105263157894735	methylated (>=50%)	P57709	Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 7.2.2.10) (ATP-dependent Ca(2+) pump PMR1) (Ca(2+)/Mn(2+)-ATPase 2C1) (Secretory pathway Ca(2+)-transporting ATPase type 1) (SPCA1)	actin cytoskeleton organization [GO:0030036]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; calcium-dependent cell-cell adhesion [GO:0016339]; epidermis development [GO:0008544]; Golgi calcium ion homeostasis [GO:0032468]; Golgi calcium ion transport [GO:0032472]; intracellular calcium ion homeostasis [GO:0006874]; intracellular manganese ion homeostasis [GO:0030026]; manganese ion transport [GO:0006828]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of Golgi to plasma membrane protein transport [GO:0042998]; trans-Golgi network membrane organization [GO:0098629]	hit with GO BP
GN005365	Chromosome_1A	3165	3	70	36.27172195892575	0.6762263183437263	90.02240220575564	70	0.9857142857142858	91.68573607932876	22	1	89.53695458593054	48	0.9791666666666666	89.29411764705883	32	1	methylated (>=50%)	Q9P2T1	GMP reductase 2 (GMPR 2) (EC 1.7.1.7) (Guanosine 5'-monophosphate oxidoreductase 2) (Guanosine monophosphate reductase 2)	GMP metabolic process [GO:0046037]	hit with GO BP
GN001949	Chromosome_1A	31899	15	405	35.863193203548704	0.40722909385400025	64.89744218354171	391	0.7340153452685422	82.29609586393507	58	0.9137931034482759	62.84095581852241	333	0.7027027027027027	68.46394984326018	51	0.6470588235294118	methylated (>=50%)	Q8TCX5	Rhophilin-1 (GTP-Rho-binding protein 1)	negative regulation of stress fiber assembly [GO:0051497]; signal transduction [GO:0007165]	hit with GO BP
GN001944	Chromosome_1A	1411	2	51	44.932671863926295	0.7162222686691947	0.5076142131979695	51	0	0.5253940455341506	50	0	0	1	0	0.6426099851705388	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001943	Chromosome_1A	1257	1	37	44.630071599045344	0.5911309387630596	0.651890482398957	37	0	0.651890482398957	37	0	NA	NA	NA	0.9053497942386831	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005367	Chromosome_1A	261	1	10	44.06130268199234	0.7909090909090909	1.2396694214876034	10	0	1.2396694214876034	10	0	NA	NA	NA	0.5327868852459017	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005368	Chromosome_1A	9391	6	140	34.82057288893621	0.4926701294048829	84.69135802469135	137	0.9197080291970803	85.49931600547195	19	0.8947368421052632	84.62255358807083	118	0.923728813559322	37.98677443056576	41	0.07317073170731707	methylated (>=50%)	Q8NCC3	Lysosomal phospholipase A and acyltransferase (EC 2.3.1.-) (EC 3.1.1.32) (EC 3.1.1.4) (1-O-acylceramide synthase) (ACS) (LCAT-like lysophospholipase) (LLPL) (EC 3.1.1.5) (Lysophospholipase 3) (Lysosomal phospholipase A2) (LPLA2) (Phospholipase A2 group XV) (PLA2G15)	ceramide metabolic process [GO:0006672]; diacylglycerol biosynthetic process [GO:0006651]; fatty acid catabolic process [GO:0009062]; glycerophospholipid metabolic process [GO:0006650]; phosphatidylcholine catabolic process [GO:0034638]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylethanolamine catabolic process [GO:0046338]; phosphatidylglycerol metabolic process [GO:0046471]; phosphatidylserine metabolic process [GO:0006658]; phospholipid metabolic process [GO:0006644]	hit with GO BP
GN005369	Chromosome_1A	17700	16	286	36.570621468926554	0.4837252289338437	76.78278429887669	283	0.8904593639575972	88.63214947938953	161	0.9565217391304348	67.37973967176005	122	0.8032786885245902	44.46177847113884	26	0.34615384615384615	methylated (>=50%)	O57415	Ras-responsive element-binding protein 1 (RREB-1)	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of developmental process [GO:0051094]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN001939	Chromosome_1A	2605	4	30	33.01343570057582	0.4231094074844075	74.37431991294886	29	0.6551724137931034	71.8796992481203	12	0.5833333333333334	75.78857630008525	17	0.7058823529411765	1.5706806282722514	60	0	methylated (>=50%)	Q02369	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit)	mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	hit with GO BP
GN005371	Chromosome_1A	8527	5	82	35.68664242992846	0.30858113773776424	80.54437107424707	80	0.8625	81.07734806629834	11	0.9090909090909091	80.47402005469462	69	0.855072463768116	3.175355450236967	45	0	methylated (>=50%)	Q6IQ73	Charged multivesicular body protein 4c (Chromatin-modifying protein 4c) (CHMP4c)	cilium assembly [GO:0060271]; late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; midbody abscission [GO:0061952]; mitotic cytokinesis checkpoint signaling [GO:0044878]; negative regulation of cytokinesis [GO:0032466]; nuclear membrane reassembly [GO:0031468]	hit with GO BP
GN001937	Chromosome_1A	37895	14	424	33.753793376434885	0.39297121287539405	78.25160684624828	419	0.9236276849642004	68.28391734052111	20	0.8	78.66897407922953	399	0.9298245614035088	0.39447731755424065	71	0	methylated (>=50%)	O08654	Phagosome assembly factor 1	Golgi to plasma membrane protein transport [GO:0043001]	hit with GO BP
GN005372	Chromosome_1A	11159	6	128	34.69844968187113	0.38108745909588737	42.6207085214061	128	0.3046875	46.54525977504017	33	0.30303030303030304	41.2747979426892	95	0.30526315789473685	1.0721649484536082	50	0	sparse (10-50%)	Q08024	Core-binding factor subunit beta (CBF-beta) (Polyomavirus enhancer-binding protein 2 beta subunit) (PEA2-beta) (PEBP2-beta) (SL3-3 enhancer factor 1 subunit beta) (SL3/AKV core-binding factor beta subunit)	cell maturation [GO:0048469]; definitive hemopoiesis [GO:0060216]; lymphocyte differentiation [GO:0030098]; myeloid cell differentiation [GO:0030099]; negative regulation of CD4-positive, alpha-beta T cell differentiation [GO:0043371]; negative regulation of transcription by RNA polymerase II [GO:0000122]; ossification [GO:0001503]; osteoblast differentiation [GO:0001649]; positive regulation of CD8-positive, alpha-beta T cell differentiation [GO:0043378]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein polyubiquitination [GO:0000209]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005373	Chromosome_1A	47281	25	651	36.382479219982656	0.41750109651930806	79.38355035437613	600	0.8666666666666667	81.80382246090664	123	0.9024390243902439	78.74520913181136	477	0.8574423480083857	0.529287226534933	43	0	methylated (>=50%)	Q92620	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.4.13) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN005374	Chromosome_1A	12795	7	318	34.919890582258695	0.8193158141779869	0.9456264775413712	257	0	0.45135406218655966	61	0	1.0664378524148075	196	0	0.9169363538295577	46	0	unmethylated (<10%)	Q6GM59	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN005375	Chromosome_1A	7808	4	140	40.458504098360656	0.4454779376105931	87.12913252331167	102	0.9607843137254902	73.26549491211841	18	0.7777777777777778	89.62814740703685	84	1	62.75127149430855	74	0.47297297297297297	methylated (>=50%)	A9C3P0	Malectin	NA	hit, no GO BP
GN005376	Chromosome_1A	816	1	10	40.0735294117647	0.31062047963456413	85.45751633986929	10	1	85.45751633986929	10	1	NA	NA	NA	84.009009009009	18	0.7777777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001933	Chromosome_1A	1395	2	43	39.71326164874552	0.7850925986519207	1.0532837670384139	42	0	1.450777202072539	27	0	0.4622496147919877	15	0	55.0888074429095	60	0.45	unmethylated (<10%)	Q6DBQ8	Ceramide-1-phosphate transfer protein (Glycolipid transfer protein domain-containing protein 1) (CPTP)	ceramide 1-phosphate transport [GO:1902389]; ceramide transport [GO:0035627]; intermembrane lipid transfer [GO:0120009]; negative regulation of autophagy [GO:0010507]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]	hit with GO BP
GN005377	Chromosome_1A	492	1	17	43.699186991869915	0.7307356281670453	1.1385199240986716	17	0	1.1385199240986716	17	0	NA	NA	NA	1.4155712841253791	42	0	unmethylated (<10%)	Q66JG2	Ceramide-1-phosphate transfer protein (Glycolipid transfer protein domain-containing protein 1) (CPTP)	ceramide 1-phosphate transport [GO:1902389]; ceramide transport [GO:0035627]; intermembrane lipid transfer [GO:0120009]; negative regulation of autophagy [GO:0010507]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]	hit with GO BP
GN001931	Chromosome_1A	876	1	8	38.12785388127854	0.2514261112904962	NA	0	NA	NA	NA	NA	NA	NA	NA	84.5724907063197	12	1	NA	NA	NA	NA	no Swiss-Prot hit
GN005378	Chromosome_1A	1474	2	43	38.60244233378562	0.7976792771023685	0.8626887131560029	43	0	0.6356968215158925	32	0	1.492537313432836	11	0	28.99728997289973	45	0.2	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005379	Chromosome_1A	546	2	13	36.99633699633699	0.705777070697027	0.6932409012131716	13	0	0.7633587786259542	12	0	0	1	0	5.679442508710801	49	0	unmethylated (<10%)	O15375	Monocarboxylate transporter 6 (MCT 6) (Monocarboxylate transporter 5) (MCT 5) (Solute carrier family 16 member 5)	monocarboxylic acid transport [GO:0015718]	hit with GO BP
GN005380	Chromosome_1A	5753	4	153	37.0241613071441	0.7764723006351447	0.8063413967473008	153	0	0.546448087431694	23	0	0.8434864104967198	130	0	4.035476718403547	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005381	Chromosome_1A	8560	7	216	36.55373831775701	0.7555996910515282	0.6823420931304749	216	0	0.6147540983606558	45	0	0.6971775553806364	171	0	0.5034053893988747	39	0	unmethylated (<10%)	P53988	Monocarboxylate transporter 2 (MCT 2) (Solute carrier family 16 member 7)	lactate transmembrane transport [GO:0035873]; plasma membrane lactate transport [GO:0035879]; pyruvate transmembrane transport [GO:1901475]	hit with GO BP
GN001929	Chromosome_1A	14064	7	350	35.310011376564276	0.798406560610386	0.563570784490532	293	0	0.7208289532962907	36	0	0.5320907861115286	257	0	1.5663937344250622	55	0	unmethylated (<10%)	P53988	Monocarboxylate transporter 2 (MCT 2) (Solute carrier family 16 member 7)	lactate transmembrane transport [GO:0035873]; plasma membrane lactate transport [GO:0035879]; pyruvate transmembrane transport [GO:1901475]	hit with GO BP
GN005382	Chromosome_1A	45581	45	761	36.24097760031592	0.5116385006296077	92.98068736837388	745	0.9892617449664429	94.51566951566952	155	0.9870967741935484	92.69420960280746	590	0.9898305084745763	0.6071929005137786	55	0	methylated (>=50%)	Q91437	Multifunctional protein CAD (Carbamoyl phosphate synthetase 2-aspartate transcarbamylase-dihydroorotase) [Includes: Glutamine-dependent carbamoyl-phosphate synthase (EC 6.3.5.5); Glutamine amidotransferase (GATase) (GLNase) (EC 3.5.1.2); Ammonium-dependent carbamoyl phosphate synthase (CPS) (CPSase) (EC 6.3.4.16); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)]	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; 'de novo' UMP biosynthetic process [GO:0044205]; L-citrulline biosynthetic process [GO:0019240]; L-glutamine metabolic process [GO:0006541]; UTP biosynthetic process [GO:0006228]	hit with GO BP
GN001925	Chromosome_1A	4144	4	135	36.7519305019305	0.9661008168269812	0.7146638433033351	135	0	0.6381934216985763	39	0	0.7428882043848524	96	0	0.46899426784783743	49	0	unmethylated (<10%)	Q8AVU4	Transcription factor HES-1-B (Hairy and enhancer of split 1-B)	anterior/posterior pattern specification [GO:0009952]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of muscle organ development [GO:0048635]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of transcription by RNA polymerase II [GO:0000122]; Notch signaling pathway [GO:0007219]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN001924	Chromosome_1A	1517	3	45	40.14502307185234	0.7570699789286902	0.7497656982193065	45	0	1.0878661087866108	33	0	0.3194888178913738	12	0	0.6942515967786725	85	0	unmethylated (<10%)	O57337	Transcription factor HES-1 (C-HAIRY1) (Hairy and enhancer of split 1)	anterior/posterior pattern specification [GO:0009952]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN005384	Chromosome_1A	1148	3	44	43.641114982578394	0.8115159694107063	0.6769825918762089	44	0	0.657030223390276	37	0	0.7326007326007326	7	0	0.3799873337555415	79	0	unmethylated (<10%)	Q90VV1	Transcription factor HES-4-B (Hairy and enhancer of split 4-B) (Protein hairy-2) (Xhairy2) (Protein hairy-2a) (Xhairy2b)	anterior/posterior pattern specification [GO:0009952]; floor plate development [GO:0033504]; lens development in camera-type eye [GO:0002088]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of skeletal muscle tissue development [GO:0048642]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural crest formation [GO:0014029]; prechordal plate formation [GO:0021501]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN005385	Chromosome_1A	2902	2	41	35.49276361130255	0.45133048838311995	71.71514543630893	41	0.8536585365853658	93.4747145187602	12	1	66.10597140454163	29	0.7931034482758621	88.97526501766785	20	1	methylated (>=50%)	Q7ZV00	Deubiquitinase OTUD6B (EC 3.4.19.12)	antiviral innate immune response [GO:0140374]; protein deubiquitination [GO:0016579]	hit with GO BP
GN005386	Chromosome_1A	3895	5	61	35.224646983311935	0.5051912899446531	69.27521008403362	61	0.6557377049180327	79.14798206278027	11	0.8181818181818182	67.965496728138	50	0.62	57.33624454148472	38	0.5789473684210527	methylated (>=50%)	Q6NYE7	Transmembrane protein 192	NA	hit, no GO BP
GN005387	Chromosome_1A	6287	7	57	37.9354222999841	0.25994716317612854	86.9067653988556	56	0.9821428571428571	90.20408163265306	16	1	85.82289803220036	40	0.975	66.38418079096046	34	0.6764705882352942	methylated (>=50%)	P97697	Inositol monophosphatase 1 (IMP 1) (IMPase 1) (EC 3.1.3.25) (D-galactose 1-phosphate phosphatase) (EC 3.1.3.94) (Inositol-1(or 4)-monophosphatase 1) (Lithium-sensitive myo-inositol monophosphatase A1)	inositol biosynthetic process [GO:0006021]; phosphate-containing compound metabolic process [GO:0006796]; phosphatidylinositol biosynthetic process [GO:0006661]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; signal transduction [GO:0007165]	hit with GO BP
GN005388	Chromosome_1A	3172	3	71	34.20554854981084	0.7669245647969052	77.96641109894122	70	0.8142857142857143	82.61617900172116	11	0.9090909090909091	77.41474372064529	59	0.7966101694915254	40.11940298507463	42	0.5238095238095238	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005389	Chromosome_1A	1957	2	61	37.40419008686766	0.8914918562883195	40.621572212065814	60	0.45	80.57142857142857	18	0.8333333333333334	26.87960687960688	42	0.2857142857142857	0.5456529647144416	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001917	Chromosome_1A	9586	15	145	39.881076569997916	0.3813863005279159	82.73370687112946	145	0.903448275862069	95.76012223071046	70	1	74.54370797310278	75	0.8133333333333334	93.53393085787452	33	1	methylated (>=50%)	Q6P2Q9	Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)	cellular response to lipopolysaccharide [GO:0071222]; cellular response to tumor necrosis factor [GO:0071356]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	hit with GO BP
GN001916	Chromosome_1A	1739	4	40	40.48303622771708	0.5632206244332167	96.52128764278297	40	1	97.1604938271605	34	1	93.13725490196079	6	1	91.72644667623146	33	0.9090909090909091	methylated (>=50%)	Q6P2Q9	Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)	cellular response to lipopolysaccharide [GO:0071222]; cellular response to tumor necrosis factor [GO:0071356]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	hit with GO BP
GN001915	Chromosome_1A	1907	5	31	36.86418458311484	0.4814244763673084	90.93362115488397	31	0.9032258064516129	91.82295573893474	23	0.9130434782608695	88.65384615384616	8	0.875	92.50474383301707	28	0.9642857142857143	methylated (>=50%)	Q6P2Q9	Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)	cellular response to lipopolysaccharide [GO:0071222]; cellular response to tumor necrosis factor [GO:0071356]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; RNA splicing [GO:0008380]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]; spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	hit with GO BP
GN005390	Chromosome_1A	10471	8	144	37.704135230637	0.3874385370586591	91.85045406297913	130	0.9615384615384616	92.42304656669297	24	1	91.74986134220744	106	0.9528301886792453	3.7272464605605315	76	0.039473684210526314	methylated (>=50%)	P51810	G protein-coupled receptor 143 (Ocular albinism type 1 protein)	eye pigment biosynthetic process [GO:0006726]; G protein-coupled receptor signaling pathway [GO:0007186]; melanosome localization [GO:0032400]; melanosome organization [GO:0032438]; melanosome transport [GO:0032402]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; regulation of melanosome organization [GO:1903056]; regulation of melanosome transport [GO:1902908]; signal transduction [GO:0007165]; visual perception [GO:0007601]	hit with GO BP
GN005391	Chromosome_1A	12585	7	135	36.23361144219309	0.32708424458791785	82.7646038172354	135	0.8518518518518519	72.87977632805219	36	0.6944444444444444	84.57983912373781	99	0.9090909090909091	62.20565149136578	49	0.5714285714285714	methylated (>=50%)	Q9Y2E6	E3 ubiquitin-protein ligase DTX4 (EC 2.3.2.27) (Protein deltex-4) (Deltex4) (RING finger protein 155) (RING-type E3 ubiquitin transferase DTX4)	negative regulation of innate immune response [GO:0045824]; Notch signaling pathway [GO:0007219]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of type I interferon production [GO:0032479]	hit with GO BP
GN005392	Chromosome_1A	2712	3	39	36.98377581120944	0.42435184516501767	83.80208333333333	39	0.9487179487179487	84.90175801447776	24	1	82.68625393494229	15	0.8666666666666667	84.18669453152212	45	0.8888888888888888	methylated (>=50%)	Q8VDN4	Coiled-coil domain-containing protein 92	adipose tissue development [GO:0060612]; connective tissue replacement involved in inflammatory response wound healing [GO:0002248]; energy homeostasis [GO:0097009]; fatty acid metabolic process [GO:0006631]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage migration [GO:1905517]; NLRP3 inflammasome complex assembly [GO:0044546]; response to insulin [GO:0032868]	hit with GO BP
GN005393	Chromosome_1A	5311	3	77	36.1890416117492	0.44366031394391364	84.04013631200303	77	0.935064935064935	76	1	1	84.07837169488302	76	0.9342105263157895	68.18181818181819	4	1	methylated (>=50%)	A0QAB6	Uncharacterized tRNA/rRNA methyltransferase MAV_0574 (EC 2.1.1.-)	RNA processing [GO:0006396]	hit with GO BP
GN005394	Chromosome_1A	552	1	6	50.36231884057971	0.17293233082706766	62.43654822335025	6	0.3333333333333333	62.43654822335025	6	0.3333333333333333	NA	NA	NA	71.07039537126326	22	0.8636363636363636	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005395	Chromosome_1A	3546	4	35	34.292160180485055	0.33802333562113934	69.86357999173212	35	0.7714285714285715	70.24221453287197	8	0.875	69.81220657276995	27	0.7407407407407407	64.21435059037239	19	0.631578947368421	methylated (>=50%)	Q99J25	rRNA methyltransferase 1, mitochondrial (EC 2.1.1.-) (16S rRNA (guanosine(1145)-2'-O)-methyltransferase) (16S rRNA [Gm1145] 2'-O-methyltransferase)	rRNA modification [GO:0000154]; rRNA processing [GO:0006364]	hit with GO BP
GN005396	Chromosome_1A	16018	17	185	35.7660132351105	0.36503022897152515	81.01625554166193	185	0.8864864864864865	85.3112840466926	62	0.9032258064516129	78.69770698407142	123	0.8780487804878049	40.10965837199494	42	0.40476190476190477	methylated (>=50%)	Q32NQ8	E3 ubiquitin-protein ligase RNF10 (EC 2.3.2.27) (RING finger protein 10)	negative regulation of Schwann cell proliferation [GO:0010626]; nonfunctional rRNA decay [GO:0070651]; positive regulation of myelination [GO:0031643]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein monoubiquitination [GO:0006513]; ribosome disassembly [GO:0032790]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN005397	Chromosome_1A	4168	5	44	37.643953934740885	0.29799099163508974	83.417593528817	44	0.8409090909090909	86.88046647230321	9	0.8888888888888888	82.69113149847095	35	0.8285714285714286	88.23016564952049	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001908	Chromosome_1A	16159	17	219	36.14085030014233	0.41630842214891656	83.96038022206247	204	0.9362745098039216	87.74193548387096	68	0.9558823529411765	82.54473597540894	136	0.9264705882352942	81.76406926406926	25	0.92	methylated (>=50%)	Q7TSH2	Phosphorylase b kinase regulatory subunit beta (Phosphorylase kinase subunit beta)	glucose homeostasis [GO:0042593]; glycogen catabolic process [GO:0005980]; positive regulation of glycogen catabolic process [GO:0045819]; protein phosphorylation [GO:0006468]	hit with GO BP
GN001907	Chromosome_1A	1904	3	22	35.714285714285715	0.36238115424211226	85.06825938566553	22	0.9090909090909091	82.90598290598291	2	1	85.30805687203791	20	0.9	73	6	0.8333333333333334	methylated (>=50%)	Q9VLS1	Probable phosphorylase b kinase regulatory subunit beta (Phosphorylase kinase subunit beta)	glycogen metabolic process [GO:0005977]; positive regulation of glycogen catabolic process [GO:0045819]	hit with GO BP
GN001906	Chromosome_1A	2382	4	39	39.252728799328295	0.4341028037383178	65.09598603839441	39	0.6410256410256411	66.7458432304038	17	0.6470588235294118	63.511972633979475	22	0.6363636363636364	0.9113001215066828	25	0	methylated (>=50%)	Q9VLS1	Probable phosphorylase b kinase regulatory subunit beta (Phosphorylase kinase subunit beta)	glycogen metabolic process [GO:0005977]; positive regulation of glycogen catabolic process [GO:0045819]	hit with GO BP
GN005399	Chromosome_1A	750	1	12	40.53333333333333	0.4022346368715084	79.15006640106242	12	0.9166666666666666	79.15006640106242	12	0.9166666666666666	NA	NA	NA	79.4049279404928	31	0.9354838709677419	methylated (>=50%)	O09053	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; determination of adult lifespan [GO:0008340]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of hydrolase activity [GO:0051345]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; regulation of apoptotic process [GO:0042981]; regulation of growth rate [GO:0040009]; replication fork processing [GO:0031297]; replicative senescence [GO:0090399]; response to oxidative stress [GO:0006979]; response to UV-C [GO:0010225]; telomere maintenance [GO:0000723]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN005400	Chromosome_1A	24007	11	239	36.106135710417796	0.30697287591875083	82.83833813245577	225	0.9066666666666666	90.2486728136351	75	0.9866666666666667	79.74580223880596	150	0.8666666666666667	75.07692307692308	12	0.9166666666666666	methylated (>=50%)	Q96I34	Protein phosphatase 1 regulatory subunit 16A (Myosin phosphatase-targeting subunit 3)	NA	hit, no GO BP
GN005401	Chromosome_1A	7059	9	107	34.806629834254146	0.5031388180937675	84.8388033691548	107	0.9158878504672897	89.70997218911403	45	0.9555555555555556	82.03250171663997	62	0.8870967741935484	78.49686847599165	13	0.8461538461538461	methylated (>=50%)	Q8BH79	Anoctamin-10 (Transmembrane protein 16K)	chloride transmembrane transport [GO:1902476]	hit with GO BP
GN005402	Chromosome_1A	219	1	5	51.598173515981735	0.35784313725490197	95.6989247311828	5	1	95.6989247311828	5	1	NA	NA	NA	85.08213208179684	52	0.9423076923076923	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005403	Chromosome_1A	1794	1	37	42.36343366778149	0.46219084224598933	93.82615759545085	37	0.972972972972973	93.82615759545085	37	0.972972972972973	NA	NA	NA	91.17828500925354	28	0.9642857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005404	Chromosome_1A	765	1	28	43.13725490196079	0.7985088536812674	93.10850439882698	28	1	93.10850439882698	28	1	NA	NA	NA	91.12306657700067	18	0.9444444444444444	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005405	Chromosome_1A	1131	1	53	43.67816091954023	0.9831072769914553	0.6912442396313364	53	0	0.6912442396313364	53	0	NA	NA	NA	0.6788866259334692	63	0	unmethylated (<10%)	Q20929	G protein-coupled receptor dmsr-1 (Dromyosuppressin receptor related 1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of cellular response to heat [GO:1900034]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]	hit with GO BP
GN005406	Chromosome_1A	363	1	12	45.730027548209364	0.6326797385620915	0.9090909090909091	12	0	0.9090909090909091	12	0	NA	NA	NA	0.7477906186267845	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001899	Chromosome_1A	207	1	3	42.99516908212561	0.31458966565349544	0.625	3	0	0.625	3	0	NA	NA	NA	0.7434944237918215	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001900	Chromosome_1A	337	1	4	36.49851632047478	0.3575596816976127	0	3	0	0	3	0	NA	NA	NA	1.120971508640822	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005407	Chromosome_1A	751	3	24	40.87882822902796	0.7673052362707535	0	3	0	0	2	0	0	1	0	7.77327935222672	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005408	Chromosome_1A	792	2	6	41.28787878787879	0.17824456114028508	54.0084388185654	6	0.6666666666666666	54.0084388185654	6	0.6666666666666666	NA	NA	NA	65.66579634464752	26	0.7692307692307693	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005409	Chromosome_1A	13769	9	167	36.967100007262694	0.35508326552886943	74.51796224883296	166	0.8674698795180723	78.69822485207101	24	0.9583333333333334	73.94764156383347	142	0.852112676056338	78.60929217337075	54	0.9444444444444444	methylated (>=50%)	Q90404	Agrin	NA	hit, no GO BP
GN005410	Chromosome_1A	636	1	21	43.710691823899374	0.6925589836660617	71.15732368896926	21	0.9047619047619048	71.15732368896926	21	0.9047619047619048	NA	NA	NA	79.8547215496368	32	0.8125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005411	Chromosome_1A	12844	15	135	37.32482092805979	0.30521239486838186	71.08362779740871	124	0.8548387096774194	72.00819672131148	65	0.8769230769230769	70.56525735294117	59	0.8305084745762712	78.0345130155016	47	0.9361702127659575	methylated (>=50%)	P31696	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]	actin cytoskeleton organization [GO:0030036]; brain development [GO:0007420]; chemical synaptic transmission [GO:0007268]; cytoskeleton organization [GO:0007010]; filopodium assembly [GO:0046847]; negative regulation of neuron projection development [GO:0010977]; nervous system development [GO:0007399]; neuromuscular junction development [GO:0007528]; neuron cell-cell adhesion [GO:0007158]; positive regulation of synaptic assembly at neuromuscular junction [GO:0045887]; positive regulation of transcription by RNA polymerase II [GO:0045944]; receptor clustering [GO:0043113]; signal transduction [GO:0007165]; skeletal muscle acetylcholine-gated channel clustering [GO:0071340]	hit with GO BP
GN005412	Chromosome_1A	336	1	10	45.535714285714285	0.5783132530120482	83.67768595041322	10	1	83.67768595041322	10	1	NA	NA	NA	70.98569157392687	25	0.8	methylated (>=50%)	A2ASQ1	Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]	cell surface receptor signaling pathway [GO:0007166]; chemical synaptic transmission [GO:0007268]; chondrocyte differentiation [GO:0002062]; circadian rhythm [GO:0007623]; enzyme-linked receptor protein signaling pathway [GO:0007167]; filopodium assembly [GO:0046847]; negative regulation of sodium ion export across plasma membrane [GO:1903277]; nervous system development [GO:0007399]; neuromuscular junction development [GO:0007528]; plasma membrane organization [GO:0007009]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein binding [GO:0032092]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of skeletal muscle acetylcholine-gated channel clustering [GO:1904395]; positive regulation of synaptic assembly at neuromuscular junction [GO:0045887]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein transport [GO:0015031]; receptor clustering [GO:0043113]; regulation of axon guidance [GO:1902667]; regulation of cardiac muscle cell membrane potential [GO:0086036]; regulation of cardiac muscle contraction [GO:0055117]; regulation of microtubule cytoskeleton organization [GO:0070507]; regulation of synapse organization [GO:0050807]; regulation of synaptic activity [GO:0060025]; signal transduction [GO:0007165]; skeletal muscle acetylcholine-gated channel clustering [GO:0071340]; synapse assembly [GO:0007416]	hit with GO BP
GN005413	Chromosome_1A	414	1	3	42.51207729468599	0.16659959758551307	80.95238095238095	3	1	80.95238095238095	3	1	NA	NA	NA	69.91643454038997	18	0.7777777777777778	NA	NA	NA	NA	no Swiss-Prot hit
GN005414	Chromosome_1A	5742	4	107	36.555207244862416	0.5604792582334879	82.2654312932272	106	0.8584905660377359	67.89473684210526	38	0.6842105263157895	87.00329689397883	68	0.9558823529411765	46.96784696784697	49	0.42857142857142855	methylated (>=50%)	A3KQ55	7SK snRNA methylphosphate capping enzyme (MePCE) (EC 2.1.1.-) (Bicoid-interacting protein 3 homolog) (Bin3 homolog) (zBCDIN3)	positive regulation of protein localization to Cajal body [GO:1904871]; positive regulation of snRNA transcription by RNA polymerase II [GO:1905382]; RNA methylation [GO:0001510]; snRNA metabolic process [GO:0016073]; snRNA modification [GO:0040031]	hit with GO BP
GN001892	Chromosome_1A	26286	8	672	36.70775317659591	0.7591090157913071	2.1855864342910976	664	0	0.968054211035818	82	0	2.27005607978777	582	0	0.27609055770292656	37	0	unmethylated (<10%)	Q8K4Q8	Collectin-12 (Collectin placenta protein 1) (CL-P1) (Scavenger receptor with C-type lectin)	defense response to bacterium [GO:0042742]; immune response [GO:0006955]; phagocytosis, recognition [GO:0006910]	hit with GO BP
GN005415	Chromosome_1A	18902	11	495	36.895566606708286	0.7695017901329146	1.738587267711207	474	0.029535864978902954	0.3279763857002296	57	0	2.0047023883182775	417	0.03357314148681055	0.7171314741035857	59	0	unmethylated (<10%)	Q8R5F7	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Helicase with 2 CARD domains) (Helicard) (Interferon induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (RIG-I-like receptor 2) (RLR-2)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cellular response to virus [GO:0098586]; defense response to virus [GO:0051607]; innate immune response [GO:0045087]; MDA-5 signaling pathway [GO:0039530]; mRNA transcription [GO:0009299]; negative regulation of viral genome replication [GO:0045071]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of tumor necrosis factor production [GO:0032760]; protein complex oligomerization [GO:0051259]; protein sumoylation [GO:0016925]; response to virus [GO:0009615]; type I interferon-mediated signaling pathway [GO:0060337]	hit with GO BP
GN005416	Chromosome_1A	2295	5	78	36.81917211328976	1.0121221715875295	0.6091370558375635	78	0	0.43341213553979513	50	0	0.927246790299572	28	0	0.9595327492699207	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005417	Chromosome_1A	2378	6	90	37.973086627418	1.0501678148736973	0.8078335373317014	90	0	1	28	0	0.7279029462738301	62	0	0.641399416909621	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001889	Chromosome_1A	20730	22	560	35.6150506512301	0.8521001926782273	4.491778299790489	560	0.005357142857142857	1.0322308826627344	103	0	5.105587740609232	457	0.006564551422319475	0.5265467310223783	37	0	unmethylated (<10%)	Q9W436	Neprilysin-1 (EC 3.4.24.11)	proteolysis [GO:0006508]	hit with GO BP
GN000925	Chromosome_1A	1904	3	63	36.97478991596638	0.9980779311549887	0.7236292791539104	56	0	0.7098765432098766	50	0	0.8498583569405099	6	0	1.0526315789473684	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002802	Chromosome_1A	673	2	23	38.335809806835066	0.9306758056758057	1.9230769230769231	10	0	1.9230769230769231	10	0	NA	NA	NA	1.9202898550724639	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001754	Chromosome_1A	1322	3	34	36.45990922844175	0.7792513999410551	5.675877520537715	29	0	8.627450980392156	14	0	3.860072376357057	15	0	0.5888125613346418	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005419	Chromosome_1A	1374	2	33	37.70014556040757	0.6764232008592911	0.2942907592701589	33	0	0	17	0	0.51440329218107	16	0	0.4125128910278446	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001877	Chromosome_1A	291	1	9	42.61168384879725	0.6901185770750988	0.4366812227074236	9	0	0.4366812227074236	9	0	NA	NA	NA	0.5700035625222658	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005421	Chromosome_1A	17720	10	289	34.853273137697514	0.5372858601496445	88.11409689489285	289	0.9896193771626297	86.20689655172414	37	0.972972972972973	88.3394914149098	252	0.9920634920634921	84.78947368421052	23	1	methylated (>=50%)	P57768	Sorting nexin-16	early endosome to late endosome transport [GO:0045022]; endosome to lysosome transport [GO:0008333]; protein targeting to lysosome [GO:0006622]; receptor recycling [GO:0001881]	hit with GO BP
GN005422	Chromosome_1A	2129	2	17	37.952090183184595	0.22197893858825982	92.72727272727273	17	1	93.34442595673877	13	1	91.07142857142857	4	1	92.73116861710895	62	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005423	Chromosome_1A	8128	9	125	35.54379921259842	0.48761524469550444	85.21508934480477	125	0.88	83.98625429553265	33	0.696969696969697	85.50819672131148	92	0.9456521739130435	0.5765199161425576	42	0	methylated (>=50%)	Q4FZX0	DENN domain-containing protein 11 (DENND11) (Protein LCHN)	NA	hit, no GO BP
GN005424	Chromosome_1A	549	1	2	42.622950819672134	0.08546077210460772	0	2	0	0	2	0	NA	NA	NA	0.5705394190871369	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005425	Chromosome_1A	598	2	34	46.48829431438127	1.0531986531986532	0.6960556844547564	21	0	0.8064516129032258	20	0	0	1	0	0.4165220409580007	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005426	Chromosome_1A	8348	7	271	36.03258265452803	1.0004055026309029	0.6004202942059441	270	0	0.697503671071953	72	0	0.5754716981132075	198	0	0.5901287553648069	51	0	unmethylated (<10%)	Q9ES03	T-box transcription factor TBX20 (T-box protein 20)	aortic valve development [GO:0003176]; aortic valve morphogenesis [GO:0003180]; atrial septum morphogenesis [GO:0060413]; atrioventricular canal development [GO:0036302]; atrioventricular valve development [GO:0003171]; blood circulation [GO:0008015]; branching involved in blood vessel morphogenesis [GO:0001569]; cardiac chamber formation [GO:0003207]; cardiac muscle tissue morphogenesis [GO:0055008]; cardiac right ventricle morphogenesis [GO:0003215]; cardiac septum development [GO:0003279]; cell fate specification [GO:0001708]; cell population proliferation [GO:0008283]; dorsal/ventral pattern formation [GO:0009953]; embryonic heart tube development [GO:0035050]; embryonic heart tube elongation [GO:0036306]; embryonic heart tube morphogenesis [GO:0003143]; endocardial cushion formation [GO:0003272]; endocardial cushion morphogenesis [GO:0003203]; foramen ovale closure [GO:0035922]; heart looping [GO:0001947]; mesenchymal cell development [GO:0014031]; muscle contraction [GO:0006936]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of SMAD protein signal transduction [GO:0060392]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron migration [GO:0001764]; outflow tract morphogenesis [GO:0003151]; outflow tract septum morphogenesis [GO:0003148]; pericardium morphogenesis [GO:0003344]; positive regulation of apoptotic process [GO:0043065]; positive regulation of BMP signaling pathway [GO:0030513]; positive regulation of cardiac muscle cell proliferation [GO:0060045]; positive regulation of cell cycle process [GO:0090068]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pulmonary valve formation [GO:0003193]; pulmonary vein morphogenesis [GO:0060577]; regulation of epithelial to mesenchymal transition [GO:0010717]; regulation of transcription by RNA polymerase II [GO:0006357]; tricuspid valve development [GO:0003175]; visceral motor neuron differentiation [GO:0021524]	hit with GO BP
GN005427	Chromosome_1A	4466	7	133	37.68472906403941	0.8390562668806292	0.5777710202219857	133	0	0.7548526240115025	56	0	0.4479578392621871	77	0	0.5800837898807606	36	0	unmethylated (<10%)	Q9ES03	T-box transcription factor TBX20 (T-box protein 20)	aortic valve development [GO:0003176]; aortic valve morphogenesis [GO:0003180]; atrial septum morphogenesis [GO:0060413]; atrioventricular canal development [GO:0036302]; atrioventricular valve development [GO:0003171]; blood circulation [GO:0008015]; branching involved in blood vessel morphogenesis [GO:0001569]; cardiac chamber formation [GO:0003207]; cardiac muscle tissue morphogenesis [GO:0055008]; cardiac right ventricle morphogenesis [GO:0003215]; cardiac septum development [GO:0003279]; cell fate specification [GO:0001708]; cell population proliferation [GO:0008283]; dorsal/ventral pattern formation [GO:0009953]; embryonic heart tube development [GO:0035050]; embryonic heart tube elongation [GO:0036306]; embryonic heart tube morphogenesis [GO:0003143]; endocardial cushion formation [GO:0003272]; endocardial cushion morphogenesis [GO:0003203]; foramen ovale closure [GO:0035922]; heart looping [GO:0001947]; mesenchymal cell development [GO:0014031]; muscle contraction [GO:0006936]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of SMAD protein signal transduction [GO:0060392]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron migration [GO:0001764]; outflow tract morphogenesis [GO:0003151]; outflow tract septum morphogenesis [GO:0003148]; pericardium morphogenesis [GO:0003344]; positive regulation of apoptotic process [GO:0043065]; positive regulation of BMP signaling pathway [GO:0030513]; positive regulation of cardiac muscle cell proliferation [GO:0060045]; positive regulation of cell cycle process [GO:0090068]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pulmonary valve formation [GO:0003193]; pulmonary vein morphogenesis [GO:0060577]; regulation of epithelial to mesenchymal transition [GO:0010717]; regulation of transcription by RNA polymerase II [GO:0006357]; tricuspid valve development [GO:0003175]; visceral motor neuron differentiation [GO:0021524]	hit with GO BP
GN001872	Chromosome_1A	10548	6	357	35.34319302237391	1.0843976777939042	0.6442489000628535	354	0	0.7544006705783739	26	0	0.6369070897815521	328	0	0.3778337531486146	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005428	Chromosome_1A	2730	3	94	38.42490842490842	0.932966865170255	0.43243243243243246	94	0	0.4678362573099415	58	0	0.4020100502512563	36	0	0.5545286506469501	38	0	unmethylated (<10%)	Q54YM7	TM2 domain-containing protein DDB_G0278163	NA	hit, no GO BP
GN005429	Chromosome_1A	6821	6	120	35.46400820993989	0.5821588497362746	90.43514528013347	117	0.9572649572649573	97.19557195571956	31	1	88.86605001712915	86	0.9418604651162791	95.51616266944734	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005430	Chromosome_1A	441	1	24	44.89795918367347	1.0869877785765636	0.546448087431694	18	0	0.546448087431694	18	0	NA	NA	NA	1.3363028953229399	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005431	Chromosome_1A	2732	3	7	36.56661786237189	0.1035240621447518	0	4	0	0	4	0	NA	NA	NA	0.3502626970227671	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005432	Chromosome_1A	294	1	2	46.25850340136054	0.1695501730103806	79.72027972027972	2	1	79.72027972027972	2	1	NA	NA	NA	75.61475409836065	16	0.875	NA	NA	NA	NA	no Swiss-Prot hit
GN005433	Chromosome_1A	6977	6	196	36.93564569299126	0.8258091165028727	0.6159152500615915	195	0	0.5947596849381128	112	0	0.6380120886501007	83	0	0.738488271068636	38	0	unmethylated (<10%)	Q9H0J9	Protein mono-ADP-ribosyltransferase PARP12 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 12) (ARTD12) (Poly [ADP-ribose] polymerase 12) (PARP-12) (Zinc finger CCCH domain-containing protein 1)	protein auto-ADP-ribosylation [GO:0070213]; transepithelial transport [GO:0070633]	hit with GO BP
GN001868	Chromosome_1A	5822	6	171	37.78770182068018	0.8235196801087922	0.7519628441888754	171	0	0.6154419992540097	109	0	0.9508285791904374	62	0	0.5567928730512249	36	0	unmethylated (<10%)	Q9H0J9	Protein mono-ADP-ribosyltransferase PARP12 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 12) (ARTD12) (Poly [ADP-ribose] polymerase 12) (PARP-12) (Zinc finger CCCH domain-containing protein 1)	protein auto-ADP-ribosylation [GO:0070213]; transepithelial transport [GO:0070633]	hit with GO BP
GN005434	Chromosome_1A	768	1	18	40.104166666666664	0.5877551020408164	4.87012987012987	18	0	4.87012987012987	18	0	NA	NA	NA	3.6513007759014147	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003136	Chromosome_1A	700	1	14	42.57142857142857	0.456408345752608	0.3656307129798903	14	0	0.3656307129798903	14	0	NA	NA	NA	0.6294586655476291	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005435	Chromosome_1A	804	1	33	38.308457711442784	1.1294538333829978	0	10	0	0	10	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001864	Chromosome_1A	853	1	31	38.45252051582649	0.9995463995463996	0.6672226855713094	31	0	0.6672226855713094	31	0	NA	NA	NA	0.18099547511312217	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001865	Chromosome_1A	545	2	7	34.678899082568805	0.43253968253968256	0.5514705882352942	7	0	0.5514705882352942	7	0	NA	NA	NA	3.056112224448898	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005436	Chromosome_1A	1158	1	41	39.119170984455955	0.9364127647824544	0.5901881224640354	41	0	0.5901881224640354	41	0	NA	NA	NA	0.5360824742268041	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005437	Chromosome_1A	786	1	21	37.913486005089055	0.7600497306257771	0.3105590062111801	21	0	0.3105590062111801	21	0	NA	NA	NA	0.57636887608069165	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004258	Chromosome_1A	1587	5	18	37.114051669817265	0.3299604962228845	0.390625	5	0	0.390625	5	0	NA	NA	NA	1.5469613259668509	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005438	Chromosome_1A	1263	2	39	45.447347585114805	0.5980331451466036	1.452513966480447	22	0	1.814516129032258	18	0	1.0025062656641603	4	0	2.0070838252656436	49	0	unmethylated (<10%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN005439	Chromosome_1A	8674	8	272	36.914918146184	0.9206684551973074	0.725167986161932	272	0	0.8078994614003591	62	0	0.7107709130672498	210	0	0.4688063469166967	69	0	unmethylated (<10%)	Q9R141	Solute carrier family 22 member 4 (Organic cation/carnitine transporter 1) (Octn1)	acetylcholine uptake [GO:0051630]; amino acid import across plasma membrane [GO:0089718]; carnitine metabolic process [GO:0009437]; carnitine transport [GO:0015879]; lactation [GO:0007595]; liver regeneration [GO:0097421]; quaternary ammonium group transport [GO:0015697]; response to exogenous dsRNA [GO:0043330]; response to lipopolysaccharide [GO:0032496]; response to vitamin D [GO:0033280]; sodium-independent organic anion transport [GO:0043252]; sulfur amino acid transport [GO:0000101]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN005440	Chromosome_1A	459	1	11	38.12636165577342	0.6869387755102041	0.5517241379310345	11	0	0.5517241379310345	11	0	NA	NA	NA	0.2831858407079646	58	0	unmethylated (<10%)	Q9DGB6	Toll-like receptor 2 type-2	detection of bacterial lipoprotein [GO:0042494]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN005441	Chromosome_1A	288	1	10	45.486111111111114	0.6779661016949152	0	10	0	0	10	0	NA	NA	NA	1.9944979367262723	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019283	Chromosome_1A	5239	9	37	31.131895399885476	0.2918838746593185	50.04032258064516	27	0.5925925925925926	37.89473684210526	11	0.7272727272727273	52.917705735660846	16	0.5	55.348837209302324	7	0.7142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001848	Chromosome_1A	368	1	18	42.93478260869565	1.0723652258377854	1.2965964343598055	18	0	1.2965964343598055	18	0	NA	NA	NA	4.611746156878203	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001849	Chromosome_1A	1656	1	55	39.55314009661836	0.8502296404167133	68.5546875	55	0.5272727272727272	68.5546875	55	0.5272727272727272	NA	NA	NA	0.9783071033602723	59	0	methylated (>=50%)	F6VAN0	Cyclic AMP-dependent transcription factor ATF-6 alpha (cAMP-dependent transcription factor ATF-6 alpha) (Activating transcription factor 6 alpha) (ATF6-alpha) [Cleaved into: Processed cyclic AMP-dependent transcription factor ATF-6 alpha]	endoplasmic reticulum unfolded protein response [GO:0030968]; eye development [GO:0001654]; positive regulation of apoptotic process [GO:0043065]; positive regulation of ATF6-mediated unfolded protein response [GO:1903893]; positive regulation of autophagy [GO:0010508]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to endoplasmic reticulum stress [GO:0034976]; visual perception [GO:0007601]	hit with GO BP
GN005443	Chromosome_1A	396	1	14	47.474747474747474	0.6346153846153846	93.75764993880048	14	1	93.75764993880048	14	1	NA	NA	NA	74.11764705882354	39	0.8717948717948718	methylated (>=50%)	A3KNI7	Cyclin-D1-binding protein 1 homolog (Zebrafish homolog of Maid)	NA	hit, no GO BP
GN001851	Chromosome_1A	9714	5	215	36.96726374305127	0.6569525599794658	55.726300488007475	168	0.6190476190476191	55.22620904836194	12	0.6666666666666666	55.761957730812014	156	0.6153846153846154	55.030855916286555	53	0.6415094339622641	methylated (>=50%)	P56812	Programmed cell death protein 5 (TF-1 cell apoptosis-related protein 19) (Protein TFAR19)	apoptotic process [GO:0006915]; cellular response to transforming growth factor beta stimulus [GO:0071560]; negative regulation of protein folding [GO:1903333]; positive regulation of apoptotic process [GO:0043065]; positive regulation of gene expression [GO:0010628]; positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO:1902255]; positive regulation of signal transduction by p53 class mediator [GO:1901798]; regulation of apoptotic process [GO:0042981]; T cell activation [GO:0042110]	hit with GO BP
GN001852	Chromosome_1A	9683	10	138	34.214602912320565	0.4923131223666623	76.28177196804648	130	0.7846153846153846	72.96678121420389	16	0.75	76.76314038589487	114	0.7894736842105263	1.2790697674418605	26	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005444	Chromosome_1A	442	2	15	48.86877828054298	0.6005978802427756	19.130434782608695	15	0	20	14	0	12	1	0	6.111111111111111	15	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005445	Chromosome_1A	444	1	16	43.91891891891892	0.7818622055910192	0.45454545454545453	14	0	0.45454545454545453	14	0	NA	NA	NA	0.8403361344537815	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005446	Chromosome_1A	591	1	23	43.65482233502538	0.8180669234472797	0.5045408678102926	23	0	0.5045408678102926	23	0	NA	NA	NA	0.7177033492822966	50	0	unmethylated (<10%)	P15989	Collagen alpha-3(VI) chain	NA	hit, no GO BP
GN005447	Chromosome_1A	1086	2	36	40.97605893186004	0.7903930131004366	1.3134328358208955	36	0	1.3182674199623352	35	0	1.2195121951219512	1	0	0.5067567567567568	60	0	unmethylated (<10%)	Q9D411	Testis-specific serine/threonine-protein kinase 4 (TSK-4) (TSSK-4) (Testis-specific kinase 4) (EC 2.7.11.1)	fertilization [GO:0009566]; flagellated sperm motility [GO:0030317]; protein phosphorylation [GO:0006468]; spermatid development [GO:0007286]	hit with GO BP
GN005448	Chromosome_1A	6458	8	90	36.327036234128215	0.42454566703675567	83.92957482674659	89	0.8876404494382022	81.78550029958059	31	0.8709677419354839	84.90463215258856	58	0.896551724137931	0.4372267332916927	25	0	methylated (>=50%)	Q9BSE4	Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein	endoplasmic reticulum unfolded protein response [GO:0030968]; spermatogenesis [GO:0007283]	hit with GO BP
GN005449	Chromosome_1A	282	1	6	41.13475177304964	0.5444015444015444	86.66666666666667	1	1	86.66666666666667	1	1	NA	NA	NA	72.05882352941177	8	0.625	NA	NA	NA	NA	no Swiss-Prot hit
GN005450	Chromosome_1A	8937	6	248	38.3014434373951	0.7583602215842797	31.378892033966842	214	0.2803738317757009	35.73298429319372	44	0.4318181818181818	30.58345289335246	170	0.2411764705882353	37.34939759036145	22	0.3181818181818182	sparse (10-50%)	A9CJC9	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (Cyclobutane pyrimidine dimer photolyase) (CPD photolyase) (DNA photolyase PhrA) (Photoreactivating enzyme PhrA)	photoreactive repair [GO:0000719]; response to light stimulus [GO:0009416]	hit with GO BP
GN005451	Chromosome_1A	1080	1	46	45.370370370370374	0.8278758186272059	0.3849855630413859	45	0	0.3849855630413859	45	0	NA	NA	NA	0.31961646024770274	52	0	unmethylated (<10%)	Q8SWR3	Sex peptide receptor	G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of female receptivity, post-mating [GO:0045434]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN005452	Chromosome_1A	246	1	15	43.08943089430894	1.4642857142857142	0.9803921568627451	15	0	0.9803921568627451	15	0	NA	NA	NA	3.6	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005453	Chromosome_1A	459	1	9	50.76252723311547	0.3085138162808066	0.43103448275862066	7	0	0.43103448275862066	7	0	NA	NA	NA	1.5925315760571115	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005454	Chromosome_1A	480	1	11	55.208333333333336	0.30344827586206896	0.6535947712418301	8	0	0.6535947712418301	8	0	NA	NA	NA	1.1568123393316196	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001846	Chromosome_1A	1095	1	52	43.83561643835616	0.9886103201611223	0.759144237405107	52	0	0.759144237405107	52	0	NA	NA	NA	0.5671747607231479	58	0	unmethylated (<10%)	Q8SWR3	Sex peptide receptor	G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of female receptivity, post-mating [GO:0045434]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN005456	Chromosome_1A	354	1	13	46.89265536723164	0.6875840430300314	0.43103448275862066	13	0	0.43103448275862066	13	0	NA	NA	NA	0.6937033084311632	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005457	Chromosome_1A	354	1	17	47.175141242937855	0.8863033873343151	1.3618677042801557	17	0	1.3618677042801557	17	0	NA	NA	NA	0.4499437570303712	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005458	Chromosome_1A	534	1	16	44.00749063670412	0.625934065934066	0.4329004329004329	16	0	0.4329004329004329	16	0	NA	NA	NA	0.5686789151356081	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005459	Chromosome_1A	17137	7	344	34.329229153294044	0.68161524158024	90.04399350005946	342	0.9853801169590644	86.45533141210375	19	0.8947368421052632	90.25290441639055	323	0.9907120743034056	0.7785888077858881	27	0	methylated (>=50%)	Q16943	Vesicle-associated membrane protein/synaptobrevin-binding protein (VAP-33)	endoplasmic reticulum membrane organization [GO:0090158]; endoplasmic reticulum-plasma membrane tethering [GO:0061817]	hit with GO BP
GN005460	Chromosome_1A	2355	1	90	47.983014861995755	0.6642035198555957	96.00139082058415	90	1	96.00139082058415	90	1	NA	NA	NA	92.9324482623975	41	1	methylated (>=50%)	Q9UJX4	Anaphase-promoting complex subunit 5 (APC5) (Cyclosome subunit 5)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; positive regulation of mitotic metaphase/anaphase transition [GO:0045842]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; regulation of meiotic cell cycle [GO:0051445]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN001837	Chromosome_1A	7667	5	93	34.237641841659055	0.41660541528437195	73.72946414862582	93	0.8817204301075269	56.04575163398693	11	0.7272727272727273	75.56346381969158	82	0.9024390243902439	0.5613472333600642	76	0	methylated (>=50%)	E1BC52	Cilia- and flagella-associated protein 418	photoreceptor cell morphogenesis [GO:0008594]	hit with GO BP
GN001838	Chromosome_1A	7236	6	138	35.46158098396904	0.6068798532648034	93.15303713243185	137	0.9562043795620438	85.31781557743957	24	0.8333333333333334	94.22021704670162	113	0.9823008849557522	0.379746835443038	53	0	methylated (>=50%)	O55135	Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP))	assembly of large subunit precursor of preribosome [GO:1902626]; cytosolic ribosome assembly [GO:0042256]; maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]; miRNA-mediated gene silencing by inhibition of translation [GO:0035278]; miRNA-mediated post-transcriptional gene silencing [GO:0035195]; positive regulation of translation [GO:0045727]; regulation of fatty acid biosynthetic process [GO:0042304]; regulation of glycolytic process [GO:0006110]; regulation of megakaryocyte differentiation [GO:0045652]; regulation of reactive oxygen species metabolic process [GO:2000377]; response to insulin [GO:0032868]; ribosomal subunit export from nucleus [GO:0000054]	hit with GO BP
GN005462	Chromosome_1A	3591	5	136	41.38123085491507	0.8853020670752598	0.7408975444538527	136	0	0.7002801120448179	118	0	0.8665511265164645	18	0	0.4806536890170632	61	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN005463	Chromosome_1A	3322	4	97	40.45755568934377	0.7155047417726746	0.5552308591466978	95	0	0.7001166861143524	83	0	0.11750881316098707	12	0	0.4239854633555421	41	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN001841	Chromosome_1A	8669	9	251	37.09770446418272	0.8415333029091219	0.6835443037974683	251	0	0.5640345056403451	78	0	0.724309642372114	173	0	0.5394801373222168	55	0	unmethylated (<10%)	P22717	Guanylate cyclase soluble subunit beta-2 (GCS-beta-2) (EC 4.6.1.2)	intracellular signal transduction [GO:0035556]; response to oxygen levels [GO:0070482]	hit with GO BP
GN005464	Chromosome_1A	1008	1	37	40.37698412698413	0.9107692307692308	0.6442376521116678	37	0	0.6442376521116678	37	0	NA	NA	NA	0.8302889405513119	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005465	Chromosome_1A	1005	1	24	40.79601990049751	0.5739577384351799	0.5945303210463734	24	0	0.5945303210463734	24	0	NA	NA	NA	0.5534417156693185	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005466	Chromosome_1A	6831	8	86	34.09456887717757	0.4336649801351489	88.56858846918489	86	0.9651162790697675	92.69776876267748	27	1	87.22843976300197	59	0.9491525423728814	94.18032786885246	13	1	methylated (>=50%)	Q5XIG0	ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (ADP-ribose phosphohydrolase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (Nucleoside diphosphate-linked moiety X motif 9) (Nudix motif 9)	ADP catabolic process [GO:0046032]	hit with GO BP
GN005467	Chromosome_1A	594	2	26	52.35690235690236	0.656353591160221	14.841305319624498	25	0	17.29957805907173	22	0	1.1730205278592376	3	0	10.9375	52	0.019230769230769232	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005468	Chromosome_1A	207	1	7	47.82608695652174	0.5928805237315876	11.232876712328768	7	0	11.232876712328768	7	0	NA	NA	NA	6.028368794326241	24	0	sparse (10-50%)	A2CEI6	Piwi-like protein 2 (EC 3.1.26.-)	gamete generation [GO:0007276]; germ-line stem cell population maintenance [GO:0030718]; meiotic cell cycle [GO:0051321]; negative regulation of SMAD protein signal transduction [GO:0060392]; piRNA processing [GO:0034587]; positive regulation of gene expression [GO:0010628]; regulatory ncRNA-mediated gene silencing [GO:0031047]; secondary piRNA processing [GO:0140965]; spermatogenesis [GO:0007283]; transposable element silencing by heterochromatin formation [GO:0141005]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN001830	Chromosome_1A	2837	2	91	34.29679238632358	1.091615221987315	0.6088431979239445	86	0	0.5674653215636822	46	0	0.6280122681466336	40	0	0.5055976886962803	34	0	unmethylated (<10%)	P43114	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to glucose stimulus [GO:0071333]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; female pregnancy [GO:0007565]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to amino acid [GO:0043200]; response to interleukin-1 [GO:0070555]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to nematode [GO:0009624]; response to progesterone [GO:0032570]; response to prostaglandin E [GO:0034695]; response to salt [GO:1902074]; response to water-immersion restraint stress [GO:1990785]; response to xenobiotic stimulus [GO:0009410]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005469	Chromosome_1A	3822	2	122	39.45578231292517	0.8202293836194765	0.5037179179659391	122	0	0.7028753993610224	50	0	0.38402457757296465	72	0	0.5048683736025965	57	0	unmethylated (<10%)	Q8MJ08	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN005470	Chromosome_1A	772	3	15	41.58031088082902	0.4505135387488329	50.467289719626166	12	0.5833333333333334	52.317880794701985	8	0.625	46.03174603174603	4	0.5	64.19545071609099	28	0.7142857142857143	methylated (>=50%)	Q96J94	Piwi-like protein 1 (EC 3.1.26.-)	piRNA processing [GO:0034587]; piRNA-mediated gene silencing by mRNA destabilization [GO:0140991]; primary piRNA processing [GO:0140990]; regulatory ncRNA-mediated gene silencing [GO:0031047]; sperm DNA condensation [GO:0035092]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated heterochromatin formation [GO:0141006]	hit with GO BP
GN005471	Chromosome_1A	564	2	19	45.212765957446805	0.6844660194174758	56.22583139984532	19	0.7894736842105263	54.7	16	0.75	61.43344709897611	3	1	55.07051712558764	21	0.5238095238095238	methylated (>=50%)	A2CEI6	Piwi-like protein 2 (EC 3.1.26.-)	gamete generation [GO:0007276]; germ-line stem cell population maintenance [GO:0030718]; meiotic cell cycle [GO:0051321]; negative regulation of SMAD protein signal transduction [GO:0060392]; piRNA processing [GO:0034587]; positive regulation of gene expression [GO:0010628]; regulatory ncRNA-mediated gene silencing [GO:0031047]; secondary piRNA processing [GO:0140965]; spermatogenesis [GO:0007283]; transposable element silencing by heterochromatin formation [GO:0141005]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN005472	Chromosome_1A	4227	3	48	37.49704281996688	0.3248851910919816	39.1644908616188	47	0.19148936170212766	46.38095238095238	11	0.36363636363636365	37.94764734221937	36	0.1388888888888889	39.14674167838725	21	0.047619047619047616	sparse (10-50%)	Q8UVX0	Piwi-like protein 1 (EC 3.1.26.-)	anatomical structure morphogenesis [GO:0009653]; gamete generation [GO:0007276]; germ cell development [GO:0007281]; piRNA processing [GO:0034587]; regulation of cytoplasmic translation [GO:2000765]; regulatory ncRNA-mediated gene silencing [GO:0031047]; sperm DNA condensation [GO:0035092]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated heterochromatin formation [GO:0141006]	hit with GO BP
GN005473	Chromosome_1A	192	1	9	45.3125	0.9133192389006343	63.5	9	1	63.5	9	1	NA	NA	NA	54.36590436590436	24	0.75	methylated (>=50%)	A6N7Y9	Piwi-like protein 1 (EC 3.1.26.-)	piRNA processing [GO:0034587]; piRNA-mediated gene silencing by mRNA destabilization [GO:0140991]; primary piRNA processing [GO:0140990]; regulation of cytoplasmic translation [GO:2000765]; regulatory ncRNA-mediated gene silencing [GO:0031047]; sperm DNA condensation [GO:0035092]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated heterochromatin formation [GO:0141006]	hit with GO BP
GN005474	Chromosome_1A	3528	3	116	37.018140589569164	0.9598108747044918	0.40961709706144256	116	0	0.5732484076433121	49	0	0.34610630407911	67	0	0.3764842166232262	58	0	unmethylated (<10%)	P43114	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to glucose stimulus [GO:0071333]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; female pregnancy [GO:0007565]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to amino acid [GO:0043200]; response to interleukin-1 [GO:0070555]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to nematode [GO:0009624]; response to progesterone [GO:0032570]; response to prostaglandin E [GO:0034695]; response to salt [GO:1902074]; response to water-immersion restraint stress [GO:1990785]; response to xenobiotic stimulus [GO:0009410]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN005475	Chromosome_1A	345	1	8	42.31884057971015	0.5440567711413364	0.6097560975609756	8	0	0.6097560975609756	8	0	NA	NA	NA	0.4028509451502944	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005476	Chromosome_1A	222	1	5	47.747747747747745	0.3951584193663225	18.849840255591054	5	0	18.849840255591054	5	0	NA	NA	NA	10.382830626450117	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005477	Chromosome_1A	543	1	19	42.9097605893186	0.7601679929266136	0.6525285481239804	19	0	0.6525285481239804	19	0	NA	NA	NA	0.945179584120983	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001825	Chromosome_1A	562	1	21	42.52669039145908	0.8276297335203366	1.6453382084095065	20	0	1.6453382084095065	20	0	NA	NA	NA	0.6928406466512702	34	0	unmethylated (<10%)	Q8MJ08	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN001820	Chromosome_1A	5610	4	165	35.93582887700535	0.9134463566748243	0.8106607440310938	165	0	0.579950289975145	30	0	0.8463708643241857	135	0	0.30349013657056145	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001819	Chromosome_1A	13704	17	334	34.85113835376532	0.8026480812774088	0.6301062636834517	334	0	0.704079519569269	118	0	0.6044035112965894	216	0	0.7667031763417306	60	0	unmethylated (<10%)	Q0KHY3	Protein mesh	cell-matrix adhesion [GO:0007160]; smooth septate junction assembly [GO:0090528]	hit with GO BP
GN001818	Chromosome_1A	3215	8	78	35.925349922239505	0.7536288504883546	0.6416349809885932	78	0	0.6213324128408698	57	0	0.6864988558352403	21	0	0.7931262392597488	23	0	unmethylated (<10%)	Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)	epidermis development [GO:0008544]; lymph vessel morphogenesis [GO:0036303]; negative regulation of vasoconstriction [GO:0045906]; positive regulation of platelet activation [GO:0010572]	hit with GO BP
GN001817	Chromosome_1A	219	1	5	45.205479452054796	0.46794871794871795	0	5	0	0	5	0	NA	NA	NA	0.4296875	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001816	Chromosome_1A	7394	14	228	37.84149310251555	0.8620888561610212	0.5010438413361169	228	0	0.47670639219934996	131	0	0.5236656596173213	97	0	0.6514657980456026	70	0	unmethylated (<10%)	Q0KHY3	Protein mesh	cell-matrix adhesion [GO:0007160]; smooth septate junction assembly [GO:0090528]	hit with GO BP
GN001815	Chromosome_1A	20647	5	403	36.00038746549136	0.6069257629588264	73.25179145045713	401	0.8952618453865336	78.06571031929663	43	0.9302325581395349	72.90749627668377	358	0.8910614525139665	87.6086956521739	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005480	Chromosome_1A	9531	9	311	36.449480642115205	0.9838449980134845	0.80041164027214	307	0	0.5435918879364415	93	0	0.8970727101038716	214	0	0.5402160864345739	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005481	Chromosome_1A	675	1	35	43.7037037037037	1.0869065145380934	0.4678362573099415	35	0	0.4678362573099415	35	0	NA	NA	NA	0.8378870673952641	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005482	Chromosome_1A	381	1	17	50.39370078740158	0.7121495327102804	0.2915451895043732	17	0	0.2915451895043732	17	0	NA	NA	NA	0.6631666206134291	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005483	Chromosome_1A	213	1	12	53.521126760563384	0.8298701298701299	0	12	0	0	12	0	NA	NA	NA	3.194229778464709	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005484	Chromosome_1A	420	1	15	50.714285714285715	0.8200989325696433	0.6437768240343348	15	0	0.6437768240343348	15	0	NA	NA	NA	2.496217851739788	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005485	Chromosome_1A	351	1	18	49.002849002849004	0.8599428338097183	0.45662100456621	18	0	0.45662100456621	18	0	NA	NA	NA	1.313868613138686	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005486	Chromosome_1A	6831	6	198	34.69477382520861	0.9641832901928383	1.302060108802283	198	0	1.080737444373808	66	0	1.3883723813065576	132	0	4.212109815720195	49	0	unmethylated (<10%)	P78412	Iroquois-class homeodomain protein IRX-6 (Homeodomain protein IRXB3) (Iroquois homeobox protein 6)	cell development [GO:0048468]; neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005487	Chromosome_1A	1298	2	46	37.36517719568567	1.0189774046009967	0.6934812760055479	46	0	0.2827521206409048	29	0	1.0889292196007259	17	0	0.7842076798269335	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005488	Chromosome_1A	4063	4	130	37.92763967511691	0.8978730782568489	0.6537242472266244	114	0	0.4036326942482341	25	0	0.7148139018979541	89	0	0.4930156121610518	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001807	Chromosome_1A	25744	9	301	37.123213175885645	0.33958949735745836	51.364966982095446	291	0.4879725085910653	63.09739866908651	63	0.746031746031746	49.877262964099415	228	0.4166666666666667	14.092664092664092	30	0.16666666666666666	methylated (>=50%)	Q9VY77	LIM domain-containing protein jub	cytoskeleton organization [GO:0007010]; follicle cell of egg chamber development [GO:0030707]; mitotic cell cycle [GO:0000278]; negative regulation of hippo signaling [GO:0035331]; positive regulation of imaginal disc growth [GO:0045572]; protein localization to centrosome [GO:0071539]; regulation of DNA-templated transcription [GO:0006355]; response to hypoxia [GO:0001666]	hit with GO BP
GN001806	Chromosome_1A	9993	8	181	36.40548383868708	0.5472253485332559	88.85737809898454	171	0.9941520467836257	93.95567494963062	30	1	88.05337852149968	141	0.9929078014184397	85.66748566748566	20	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005489	Chromosome_1A	414	1	9	44.927536231884055	0.4563380281690141	91.37931034482759	9	1	91.37931034482759	9	1	NA	NA	NA	86.40816326530613	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005490	Chromosome_1A	1149	1	53	47.25848563968668	0.8397038140150574	91.68987929433612	53	1	91.68987929433612	53	1	NA	NA	NA	62.09075244112579	27	0.9629629629629629	methylated (>=50%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN005491	Chromosome_1A	4428	5	53	33.85275519421861	0.4183777886326118	89.25190839694656	53	1	93.22033898305085	17	1	87.5	36	1	83.793410507569	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005492	Chromosome_1A	645	1	20	48.21705426356589	0.5341614906832298	69.10197869101978	20	0.7	69.10197869101978	20	0.7	NA	NA	NA	6.209724663151728	23	0.13043478260869565	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005493	Chromosome_1A	357	1	6	40.056022408963585	0.4425619834710744	6.578947368421052	6	0	6.578947368421052	6	0	NA	NA	NA	4.980842911877395	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005494	Chromosome_1A	1814	2	38	39.911797133406836	0.5304297641491286	1.098901098901099	21	0	1.098901098901099	21	0	NA	NA	NA	3.9814456899884036	42	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN005495	Chromosome_1A	2297	3	63	37.70134958641707	0.7719855110347661	0.7224819379515512	62	0	0.5202913631633714	36	0	0.8620689655172413	26	0	0.3393665158371041	39	0	unmethylated (<10%)	Q95YD4	Inactive tyrosine-protein kinase kin-32	signal complex assembly [GO:0007172]	hit with GO BP
GN005496	Chromosome_1A	10810	15	287	36.35522664199815	0.8035469852257296	1.434868657790572	285	0	0.6685179471356577	149	0	2.0305380126309056	136	0	1.4231824417009602	71	0	unmethylated (<10%)	Q95YD4	Inactive tyrosine-protein kinase kin-32	signal complex assembly [GO:0007172]	hit with GO BP
GN001794	Chromosome_1A	417	1	5	40.52757793764988	0.29324894514767935	0	5	0	0	5	0	NA	NA	NA	0.556398583712696	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001792	Chromosome_1A	3374	2	97	36.54416123295791	0.8615707809678251	0.5810055865921788	97	0	1.0588235294117647	24	0	0.4689655172413793	73	0	0.40719375636240246	72	0	unmethylated (<10%)	A9UL59	LHFPL tetraspan subfamily member 7 protein (Transmembrane protein 211)	NA	hit, no GO BP
GN001791	Chromosome_1A	405	1	17	42.96296296296296	0.9272727272727272	0.4087193460490463	17	0	0.4087193460490463	17	0	NA	NA	NA	0.5549389567147613	49	0	unmethylated (<10%)	Q7Z3E1	Protein mono-ADP-ribosyltransferase TIPARP (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14) (Poly [ADP-ribose] polymerase 7) (PARP-7) (TCDD-inducible poly [ADP-ribose] polymerase)	negative regulation of gene expression [GO:0010629]; positive regulation of protein catabolic process [GO:0045732]; protein auto-ADP-ribosylation [GO:0070213]; response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904612]	hit with GO BP
GN001790	Chromosome_1A	7911	9	186	35.45695866514979	0.7480714148448439	0.5666829506595017	186	0	0.5675675675675675	66	0	0.5661820964039785	120	0	0.6126616746085772	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005499	Chromosome_1A	699	1	34	44.63519313304721	1.03817927660318	0.5063291139240507	34	0	0.5063291139240507	34	0	NA	NA	NA	1.038388923851479	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001788	Chromosome_1A	1482	2	8	36.90958164642375	0.15865114411882777	2.615844544095665	7	0	3.096539162112933	6	0	0.4166666666666667	1	0	1.1113631208890904	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001784	Chromosome_1A	5154	5	114	34.710904152114864	0.7355501641215927	0.6986190089358245	114	0	0.6816632583503749	26	0	0.7039249146757679	88	0	0.8686210640608035	37	0	unmethylated (<10%)	A8Y1P7	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN001787	Chromosome_1A	1962	1	79	42.303771661569826	0.9032517482517483	0.6316812439261419	79	0	0.6316812439261419	79	0	NA	NA	NA	0.5990415335463258	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005501	Chromosome_1A	9400	8	243	36.0531914893617	0.7957609581739512	0.48765384317671645	243	0	0.4336304504938569	79	0	0.5132299270072993	164	0	1.0266940451745379	42	0	unmethylated (<10%)	Q8C1B2	Protein mono-ADP-ribosyltransferase TIPARP (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14) (TCDD-inducible poly [ADP-ribose] polymerase)	androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; face morphogenesis [GO:0060325]; female gonad development [GO:0008585]; hemopoiesis [GO:0030097]; kidney development [GO:0001822]; negative regulation of gene expression [GO:0010629]; platelet-derived growth factor receptor signaling pathway [GO:0048008]; positive regulation of protein catabolic process [GO:0045732]; post-embryonic development [GO:0009791]; protein auto-ADP-ribosylation [GO:0070213]; response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904612]; roof of mouth development [GO:0060021]; skeletal system morphogenesis [GO:0048705]; smooth muscle tissue development [GO:0048745]; vasculogenesis [GO:0001570]	hit with GO BP
GN005502	Chromosome_1A	7755	11	82	34.5712443584784	0.35498132734915344	7.581803671189146	66	0	11.428571428571429	8	0	6.8835454974068835	58	0	40.596330275229356	37	0.32432432432432434	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005503	Chromosome_1A	4199	5	96	35.53226958799714	0.7278715520790449	0.587758411025537	96	0	1.0467550593161201	30	0	0.3998857469294487	66	0	0.35959463877084014	45	0	unmethylated (<10%)	A8Y1P7	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN005504	Chromosome_1A	932	2	33	46.137339055793994	0.6695402298850575	0.8670520231213873	19	0	0.8670520231213873	19	0	NA	NA	NA	1.4138817480719794	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005505	Chromosome_1A	648	1	23	43.364197530864196	0.7610294117647058	0.6147540983606558	23	0	0.6147540983606558	23	0	NA	NA	NA	1.326486949080017	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005506	Chromosome_1A	234	1	2	39.743589743589745	0.21646623496762257	0	2	0	0	2	0	NA	NA	NA	0.4146919431279621	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005507	Chromosome_1A	1973	4	28	36.44196654840345	0.4319041811301873	1.0359116022099448	25	0	1.3722126929674099	11	0	0.8092485549132948	14	0	0.6410256410256411	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001782	Chromosome_1A	2847	2	98	43.13312258517738	0.747700668896321	0.9125475285171103	98	0	1.5676567656765676	50	0	0.3526093088857546	48	0	0.425	56	0	unmethylated (<10%)	Q9BG96	Nuclear receptor subfamily 0 group B member 1 (Nuclear receptor DAX-1)	adrenal gland development [GO:0030325]; gonad development [GO:0008406]; intracellular protein localization [GO:0008104]; male gonad development [GO:0008584]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of intracellular steroid hormone receptor signaling pathway [GO:0033144]; negative regulation of steroid biosynthetic process [GO:0010894]; negative regulation of transcription by RNA polymerase II [GO:0000122]; spermatogenesis [GO:0007283]	hit with GO BP
GN001781	Chromosome_1A	55604	13	935	35.975829077044814	0.519966851972418	64.53429148222918	881	0.6662883087400681	56.366955727978095	54	0.5	64.87973437319022	827	0.6771463119709794	27.24458204334365	30	0.2	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001780	Chromosome_1A	31804	19	574	33.58697019242862	0.6401435285176281	80.86545124369788	551	0.9401088929219601	90.52478134110787	85	0.9882352941176471	79.61348484439526	466	0.9313304721030042	10.773333333333333	38	0.07894736842105263	methylated (>=50%)	Q08AW4	Pleckstrin homology domain-containing family M member 3 (PH domain-containing family M member 3)	myoblast differentiation [GO:0045445]	hit with GO BP
GN005509	Chromosome_1A	14710	13	221	37.573079537729434	0.42642759476110476	93.32037716835816	219	1	95.97895527996994	56	1	92.69052706552706	163	1	94.7938689217759	44	1	methylated (>=50%)	Q3ZBV2	ATP-dependent RNA helicase DDX19A (EC 3.6.4.13) (DEAD box protein 19A)	NA	hit, no GO BP
GN005510	Chromosome_1A	417	1	3	43.884892086330936	0.14964114832535885	54.76190476190476	3	0.3333333333333333	54.76190476190476	3	0.3333333333333333	NA	NA	NA	16.97761194029851	60	0.11666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN005511	Chromosome_1A	770	2	10	34.41558441558441	0.4473103288021378	95.46599496221663	10	1	94.87951807228916	9	1	98.46153846153847	1	1	95.80470162748644	43	1	methylated (>=50%)	Q8EUM4	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN005512	Chromosome_1A	3987	5	78	37.37145723601706	0.5651578151578152	95.76914233157048	78	1	96.24916275954455	34	1	95.51820728291317	44	1	93.68537666174298	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005513	Chromosome_1A	683	2	12	39.09224011713031	0.4609673790776153	82.76299112801014	12	0.9166666666666666	82.87112561174551	9	0.8888888888888888	82.38636363636364	3	1	17.24015608371763	39	0.1794871794871795	methylated (>=50%)	Q4KKZ1	Cilia- and flagella-associated protein 107	flagellated sperm motility [GO:0030317]	hit with GO BP
GN005514	Chromosome_1A	232	2	6	44.39655172413793	0.5523809523809524	0.5988023952095808	6	0	0.5988023952095808	6	0	NA	NA	NA	0.647410358565737	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005515	Chromosome_1A	264	1	14	58.333333333333336	0.6787878787878788	0	12	0	0	12	0	NA	NA	NA	0.488171235448742	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001774	Chromosome_1A	24123	8	396	35.01637441445923	0.5379510045850843	82.42837460698767	373	0.9168900804289544	75.96218771100608	26	0.8461538461538461	82.7853574890032	347	0.9221902017291066	0.3861003861003861	40	0	methylated (>=50%)	P19623	Spermidine synthase (SPDSY) (EC 2.5.1.16) (Putrescine aminopropyltransferase)	polyamine metabolic process [GO:0006595]; spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]	hit with GO BP
GN001773	Chromosome_1A	318	1	5	41.82389937106918	0.37749287749287747	98.3108108108108	5	1	98.3108108108108	5	1	NA	NA	NA	86.9587366276108	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001772	Chromosome_1A	1668	5	42	38.42925659472422	0.6824877250409165	97.0747562296858	42	1	98.1651376146789	12	1	96.73758865248227	30	1	92.94360791260702	53	1	methylated (>=50%)	Q922K7	28S rRNA (cytosine-C(5))-methyltransferase (EC 2.1.1.-) (Nucleolar protein 1) (Nucleolar protein 2 homolog) (Proliferating-cell nucleolar antigen p120) (Proliferation-associated nucleolar protein p120)	blastocyst formation [GO:0001825]; maturation of LSU-rRNA [GO:0000470]; regulation of signal transduction by p53 class mediator [GO:1901796]; ribosomal large subunit assembly [GO:0000027]; ribosomal large subunit biogenesis [GO:0042273]; rRNA base methylation [GO:0070475]; rRNA processing [GO:0006364]	hit with GO BP
GN001771	Chromosome_1A	270	1	6	39.629629629629626	0.6428571428571429	94.72727272727273	6	1	94.72727272727273	6	1	NA	NA	NA	93.26773692387364	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001770	Chromosome_1A	303	1	14	46.864686468646866	0.8421679571173317	97.54901960784314	14	1	97.54901960784314	14	1	NA	NA	NA	64.53781512605042	25	0.68	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018712	Chromosome_1A	673	3	6	32.986627043090635	0.3365841460365091	60.396039603960396	6	0.5	64.77987421383648	4	0.5	55.55555555555556	2	0.5	72.74256870443074	38	0.868421052631579	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001769	Chromosome_1A	884	2	9	35.74660633484163	0.3417085427135678	82.43494423791822	9	1	82.43494423791822	9	1	NA	NA	NA	78.765029549623	38	0.9210526315789473	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005517	Chromosome_1A	516	1	5	38.565891472868216	0.27741935483870966	76.04456824512535	5	1	76.04456824512535	5	1	NA	NA	NA	89.66011466011466	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005518	Chromosome_1A	528	1	6	39.20454545454545	0.31329113924050633	1.8248175182481752	6	0	1.8248175182481752	6	0	NA	NA	NA	29.75597609561753	49	0.1836734693877551	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005519	Chromosome_1A	480	1	2	39.791666666666664	0.10983981693363844	0	2	0	0	2	0	NA	NA	NA	1.2682010333489901	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001767	Chromosome_1A	873	2	12	37.45704467353952	0.42478306706674235	0.22624434389140272	12	0	0.12330456226880394	11	0	1.36986301369863	1	0	0.5739514348785872	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001766	Chromosome_1A	471	1	5	40.76433121019108	0.26712794918330307	0.5025125628140703	5	0	0.5025125628140703	5	0	NA	NA	NA	0.5854177754124534	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005521	Chromosome_1A	291	1	7	36.76975945017182	0.7301075268817204	0.37523452157598497	7	0	0.37523452157598497	7	0	NA	NA	NA	0.32703488372093026	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001764	Chromosome_1A	879	2	16	44.36860068259386	0.37033916157573205	4.126984126984127	16	0	5.357142857142857	11	0	1.098901098901099	5	0	1.015228426395939	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005522	Chromosome_1A	468	1	17	41.452991452991455	0.8463829787234043	1.25	17	0	1.25	17	0	NA	NA	NA	0.5884001120762118	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005523	Chromosome_1A	480	1	5	40.416666666666664	0.27481964960494676	0	5	0	0	5	0	NA	NA	NA	0.8786610878661087	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005524	Chromosome_1A	411	1	16	39.416058394160586	1.00982800982801	0.5899705014749262	16	0	0.5899705014749262	16	0	NA	NA	NA	0.5022321428571429	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005525	Chromosome_1A	1902	4	15	34.06940063091483	0.2730352562875627	1.6629711751662972	15	0	0.43859649122807015	8	0	2.914798206278027	7	0	0.6372809346787042	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005526	Chromosome_1A	489	1	3	37.21881390593047	0.1916144200626959	2.4242424242424243	3	0	2.4242424242424243	3	0	NA	NA	NA	0.4581551618814905	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005527	Chromosome_1A	471	1	3	38.004246284501065	0.1851900393184797	0	3	0	0	3	0	NA	NA	NA	0.4493260109835247	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005528	Chromosome_1A	480	1	4	38.75	0.23166023166023167	6.179775280898877	4	0	6.179775280898877	4	0	NA	NA	NA	1.791530944625407	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001757	Chromosome_1A	2307	3	43	36.4109232769831	0.570123966229691	1.097972972972973	43	0	1.46163215590743	12	0	0.9049773755656109	31	0	0.80370942812983	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001765	Chromosome_1A	291	1	7	35.738831615120276	0.782258064516129	0.21929824561403508	7	0	0.21929824561403508	7	0	NA	NA	NA	0.6580915345498055	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005529	Chromosome_1A	522	1	7	39.6551724137931	0.35802469135802467	3.439153439153439	7	0	3.439153439153439	7	0	NA	NA	NA	4.4392523364485985	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001768	Chromosome_1A	516	1	5	38.372093023255815	0.28612620605522904	10.344827586206897	5	0	10.344827586206897	5	0	NA	NA	NA	4.659392509584193	69	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001755	Chromosome_1A	480	1	2	39.791666666666664	0.10983981693363844	0	2	0	0	2	0	NA	NA	NA	0.8978675645342312	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005531	Chromosome_1A	1368	3	35	35.453216374269005	0.8248062015503876	0.46296296296296297	35	0	0.6289308176100629	15	0	0.3663003663003663	20	0	0.5950516755402443	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005532	Chromosome_1A	276	1	5	41.666666666666664	0.46558704453441296	0.5115089514066496	5	0	0.5115089514066496	5	0	NA	NA	NA	4.640371229698376	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005533	Chromosome_1A	342	1	4	41.228070175438596	0.32052483598875353	0.3968253968253968	4	0	0.3968253968253968	4	0	NA	NA	NA	1.4285714285714286	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005534	Chromosome_1A	19885	22	370	35.9768669851647	0.5801783089510905	91.49524487829402	368	0.9809782608695652	95.34309946029299	120	0.9916666666666667	90.05982512655315	248	0.9758064516129032	95.10381158971181	44	1	methylated (>=50%)	Q00341	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein)	cholesterol metabolic process [GO:0008203]	hit with GO BP
GN001752	Chromosome_1A	6360	3	108	31.572327044025158	0.6939646854740041	27.70281810418446	108	0.3148148148148148	5.347132384648555	55	0.05454545454545454	42.36425339366516	53	0.5849056603773585	24.256035934868052	25	0.28	sparse (10-50%)	Q96TW9	Probable transporter MCH1	NA	hit, no GO BP
GN005535	Chromosome_1A	2595	7	71	35.6840077071291	0.8614208570025949	0.6593963986812073	70	0	0.5859375	25	0	0.6851661527920521	45	0	0.4836109618484686	55	0	unmethylated (<10%)	Q9ESH5	WAP four-disulfide core domain protein 1 (Prostate stromal protein ps20) (ps20 growth inhibitor)	negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of inflammatory response [GO:0050728]; negative regulation of wound healing [GO:0061045]; regulation of cell growth [GO:0001558]	hit with GO BP
GN005536	Chromosome_1A	16437	3	350	35.04897487376042	0.6936908193267584	4.980746165014835	295	0	0.8070432868672047	29	0	5.3736703964636	266	0	0.723404255319149	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001751	Chromosome_1A	3326	3	114	36.13950691521347	1.050571884559117	0.4092769440654843	114	0	0.2785515320334262	63	0	0.5038629492777964	51	0	0.5314908317831517	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005538	Chromosome_1A	666	2	25	39.789789789789786	0.952299245024022	0.4592422502870264	25	0	0.42735042735042733	19	0	0.5244755244755245	6	0	0.5171299288946348	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005539	Chromosome_1A	864	1	51	47.22222222222222	1.07496767583128	0.7849293563579278	51	0	0.7849293563579278	51	0	NA	NA	NA	33.87395736793327	38	0.2631578947368421	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001742	Chromosome_1A	11339	14	171	36.0613810741688	0.46681941865005894	94.4305381727159	171	0.9941520467836257	95.60585885486019	53	1	93.89428918590522	118	0.9915254237288136	71.26955475330927	45	0.7555555555555555	methylated (>=50%)	Q86YJ7	Ankyrin repeat domain-containing protein 13B	negative regulation of receptor internalization [GO:0002091]; regulation of receptor-mediated endocytosis [GO:0048259]	hit with GO BP
GN001743	Chromosome_1A	4942	4	76	33.447996762444355	0.5520602752129063	72.24155934563174	76	0.8157894736842105	72.56410256410257	9	0.8888888888888888	72.21807318894697	67	0.8059701492537313	0.778816199376947	36	0	methylated (>=50%)	O88630	Golgi SNAP receptor complex member 1 (28 kDa Golgi SNARE protein) (28 kDa cis-Golgi SNARE p28) (GOS-28)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; inter-Golgi cisterna vesicle-mediated transport [GO:0048219]; retrograde transport, endosome to Golgi [GO:0042147]; vesicle fusion [GO:0006906]	hit with GO BP
GN005541	Chromosome_1A	1902	2	35	41.37749737118822	0.43120870579090553	56.99300699300699	35	0.6857142857142857	56.99300699300699	35	0.6857142857142857	NA	NA	NA	48.408373960424434	48	0.625	methylated (>=50%)	A1K5T6	Protein nucleotidyltransferase YdiU (EC 2.7.7.-) (Protein adenylyltransferase YdiU) (EC 2.7.7.108) (Protein uridylyltransferase YdiU) (EC 2.7.7.-)	NA	hit, no GO BP
GN005542	Chromosome_1A	374	2	20	45.45454545454545	1.0733247237767256	95.47291835084883	20	1	96.16935483870968	17	1	92.65306122448979	3	1	85.97014925373135	5	1	methylated (>=50%)	F1RKB1	Dynein regulatory complex subunit 10 (IQ domain-containing protein D)	NA	hit, no GO BP
GN005543	Chromosome_1A	1555	2	39	40.12861736334405	0.6296200166112956	64.95992876224399	38	0.5789473684210527	59.917355371900825	35	0.5428571428571428	96.45161290322581	3	1	28.3250113481616	27	0.2962962962962963	methylated (>=50%)	Q4R8Y5	Dynein regulatory complex subunit 10 (IQ domain-containing protein D)	NA	hit, no GO BP
GN005544	Chromosome_1A	2347	4	40	37.7929271410311	0.47852548092116665	64.783759929391	40	0.6	64.25297891842347	18	0.4444444444444444	65.27659574468085	22	0.7272727272727273	39.52781673679289	60	0.3333333333333333	methylated (>=50%)	Q32KY6	dCTP pyrophosphatase 1 (EC 3.6.1.12) (Deoxycytidine-triphosphatase 1) (dCTPase 1)	dCTP catabolic process [GO:0006253]; DNA protection [GO:0042262]; nucleoside triphosphate catabolic process [GO:0009143]	hit with GO BP
GN005545	Chromosome_1A	7460	4	66	38.76675603217158	0.254987788179289	77.43065693430657	64	0.859375	69.41176470588235	7	0.5714285714285714	78.31442463533226	57	0.8947368421052632	5.228461013866788	61	0	methylated (>=50%)	Q32KY6	dCTP pyrophosphatase 1 (EC 3.6.1.12) (Deoxycytidine-triphosphatase 1) (dCTPase 1)	dCTP catabolic process [GO:0006253]; DNA protection [GO:0042262]; nucleoside triphosphate catabolic process [GO:0009143]	hit with GO BP
GN005546	Chromosome_1A	4327	4	86	36.65357060318928	0.595390436876505	1.6582914572864322	81	0	0.4316546762589928	17	0	1.917808219178082	64	0	0.45368620037807184	53	0	unmethylated (<10%)	Q865F7	Fatty acid-binding protein, heart (Fatty acid-binding protein 3) (Heart-type fatty acid-binding protein) (H-FABP)	NA	hit, no GO BP
GN005547	Chromosome_1A	189	1	12	55.55555555555556	0.8247272727272728	1.1904761904761905	12	0	1.1904761904761905	12	0	NA	NA	NA	0.2245508982035928	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001738	Chromosome_1A	660	1	23	37.878787878787875	0.9765826042202779	0.6349206349206349	23	0	0.6349206349206349	23	0	NA	NA	NA	1.3130615065653075	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020438	Chromosome_1A	3122	8	31	34.817424727738626	0.33202966866333206	72.95081967213115	31	0.8709677419354839	76.71232876712328	23	0.9130434782608695	61.78861788617886	8	0.75	82.15451577801959	39	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020439	Chromosome_1A	2030	7	9	34.38423645320197	0.15054383651944628	52.577319587628864	9	0.7777777777777778	43.37748344370861	5	0.6	62.5	4	1	70.69160997732426	24	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020440	Chromosome_1A	8290	15	80	34.74065138721351	0.32174198640746837	69.16019760056457	80	0.8625	73.62514029180696	39	0.9487179487179487	65.93762656946132	41	0.7804878048780488	53.776978417266186	9	0.7777777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005548	Chromosome_1A	2374	6	21	37.36310025273799	0.25615809106884113	66.22641509433963	21	0.6666666666666666	62.576687116564415	12	0.5833333333333334	69.35201401050789	9	0.7777777777777778	56.82137834036568	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005549	Chromosome_1A	1116	1	54	45.25089605734767	0.9468623322753983	0.5524861878453039	54	0	0.5524861878453039	54	0	NA	NA	NA	5	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005550	Chromosome_1A	276	1	11	46.01449275362319	0.7832817337461301	0.1524390243902439	11	0	0.1524390243902439	11	0	NA	NA	NA	1.9083969465648856	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005551	Chromosome_1A	24549	12	289	35.0849321764634	0.3825656580362848	78.76781055589002	283	0.8833922261484098	69.20239741816505	54	0.7222222222222222	80.39123630672927	229	0.9213973799126638	1.469387755102041	51	0	methylated (>=50%)	A2BFP5	Solute carrier family 12 member 9	potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN005552	Chromosome_1A	13967	12	151	35.490799742249585	0.34447722042281015	85.45123648431645	143	0.965034965034965	86.37099384914212	53	0.9622641509433962	84.99680102367242	90	0.9666666666666667	53.96825396825397	34	0.47058823529411764	methylated (>=50%)	P55937	Golgin subfamily A member 3 (Golgin-160) (Male-enhanced antigen 2) (MEA-2)	NA	hit, no GO BP
GN001718	Chromosome_1A	18095	23	206	35.02625034539928	0.37537199144117583	78.80204996796925	200	0.935	86.04095563139931	46	1	77.12933753943217	154	0.9155844155844156	69.84402079722703	13	0.8461538461538461	methylated (>=50%)	Q0V9R3	DIS3-like exonuclease 2 (EC 3.1.13.-)	miRNA catabolic process [GO:0010587]; mRNA catabolic process [GO:0006402]; nuclear-transcribed mRNA catabolic process [GO:0000956]; polyuridylation-dependent mRNA catabolic process [GO:1990074]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN005553	Chromosome_1A	18487	12	283	35.79812841456158	0.4784756334897578	81.22228297187291	275	0.9418181818181818	95.17326732673267	13	1	80.50214016482464	262	0.9389312977099237	46.7714528462192	40	0.4	methylated (>=50%)	Q68EQ9	Vacuole membrane protein 1	lipoprotein transport [GO:0042953]	hit with GO BP
GN005554	Chromosome_1A	23717	9	365	35.86035333305224	0.48058806619805744	84.45021323938438	353	0.9320113314447592	38.95348837209303	25	0.4	86.5766080509297	328	0.9725609756097561	0.42841842199214564	69	0	methylated (>=50%)	Q9UPW0	Forkhead box protein J3	male meiosis I [GO:0007141]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; spermatogenesis [GO:0007283]	hit with GO BP
GN001716	Chromosome_1A	22897	26	189	36.20124907193082	0.25320925287135054	67.17261904761905	187	0.7700534759358288	66.07142857142857	35	0.7142857142857143	67.37546992481202	152	0.7828947368421053	72.89972899728997	18	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001715	Chromosome_1A	27660	34	249	35.67968185104844	0.284146028418811	67.51105749899477	245	0.7755102040816326	61.091170136396265	63	0.6825396825396826	68.98483849703362	182	0.8076923076923077	59.56392467789891	17	0.6470588235294118	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001714	Chromosome_1A	6867	8	68	34.862385321100916	0.32610731547884675	69.81524249422633	65	0.7692307692307693	54.145077720207254	9	0.5555555555555556	71.34888438133875	56	0.8035714285714286	70.85755813953489	18	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001713	Chromosome_1A	1188	2	13	38.13131313131313	0.30107610729881473	49.93045897079277	13	0.5384615384615384	52.48041775456919	8	0.5	47.023809523809526	5	0.6	76.42028100183262	23	0.9130434782608695	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005556	Chromosome_1A	497	2	17	43.05835010060362	0.7508220030214166	1.02880658436214	17	0	1.0498687664041995	14	0	0.9523809523809523	3	0	0.5454545454545454	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005557	Chromosome_1A	228	1	0	37.719298245614034	0	NA	0	NA	NA	NA	NA	NA	NA	NA	6.896551724137931	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005558	Chromosome_1A	437	2	8	45.08009153318078	0.3750268182793392	0.10030090270812438	8	0	0.13850415512465375	6	0	0	2	0	0.499001996007984	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005559	Chromosome_1A	381	1	8	52.75590551181102	0.3123590899774544	0	5	0	0	5	0	NA	NA	NA	2.373211963589077	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005560	Chromosome_1A	6457	4	169	35.868050178101285	0.813782729863178	0.441326241937309	169	0	0.6200482259731313	63	0	0.3538928210313448	106	0	0.5002942907592701	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001697	Chromosome_1A	270	1	0	39.629629629629626	0	NA	0	NA	NA	NA	NA	NA	NA	NA	64.84118291347207	14	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN005561	Chromosome_1A	267	1	0	40.449438202247194	0	NA	0	NA	NA	NA	NA	NA	NA	NA	65.66566566566567	15	0.8666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN001698	Chromosome_1A	5115	5	116	30.83088954056696	0.9568580146171859	0.5462093074065982	114	0	0.2461033634126333	26	0	0.5923125393824826	88	0	0.6602641056422569	29	0	unmethylated (<10%)	P46088	Glutathione S-transferase (EC 2.5.1.18) (GST class-sigma)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN001699	Chromosome_1A	2674	6	59	32.834704562453254	0.8191381100726896	0.5920847616079775	58	0	0.9259259259259259	26	0	0.36591740721380034	32	0	1.1940298507462686	54	0	unmethylated (<10%)	P91253	Probable glutathione S-transferase 7 (EC 2.5.1.18) (GST class-sigma)	glutathione metabolic process [GO:0006749]; innate immune response [GO:0045087]	hit with GO BP
GN005563	Chromosome_1A	690	2	12	37.2463768115942	0.5098522167487685	0.37593984962406013	12	0	0.24449877750611246	10	0	0.8130081300813008	2	0	1.1130638547158758	44	0	unmethylated (<10%)	P18426	S-crystallin SL11 (Major lens polypeptide)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN005564	Chromosome_1A	1020	1	39	42.15686274509804	0.8608712588456794	11.098779134295228	32	0	11.098779134295228	32	0	NA	NA	NA	0.5285412262156448	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005565	Chromosome_1A	342	1	9	52.63157894736842	0.38475	0	3	0	0	3	0	NA	NA	NA	7.7250177179305455	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002615	Chromosome_1A	306	1	9	50.65359477124183	0.4728708791208791	1.1111111111111112	9	0	1.1111111111111112	9	0	NA	NA	NA	1.2426422498364944	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005566	Chromosome_1A	300	1	3	45	0.20708697653014266	2.6315789473684212	3	0	2.6315789473684212	3	0	NA	NA	NA	11.624203821656051	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001703	Chromosome_1A	1169	3	33	39.86313088109495	0.7109133126934984	0.4548408057179987	33	0	0.5644402634054563	24	0	0.21008403361344538	9	0	1.3972985561248252	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001706	Chromosome_1A	9615	14	217	34.83099323972959	0.7441239156206266	1.2621709340064913	211	0	0.9895833333333334	80	0	1.4065085493656921	131	0	0.45045045045045046	23	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN001704	Chromosome_1A	1311	3	33	38.74904652936689	0.6885175459536882	5.065856129685917	25	0	5.839416058394161	20	0	3.3112582781456954	5	0	1.9138755980861244	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001705	Chromosome_1A	673	2	22	37.89004457652303	0.9111384615384616	0.4716981132075472	22	0	0.38071065989847713	17	0	0.7352941176470589	5	0	2.904564315352697	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005567	Chromosome_1A	3354	5	55	34.97316636851521	0.5383627608346709	8.808063102541631	55	0	7.612712490761271	25	0	9.31174089068826	30	0	0.736235595390525	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005568	Chromosome_1A	1136	3	12	35.91549295774648	0.3276371764366573	0.7272727272727273	12	0	0.5291005291005291	8	0	1.1627906976744187	4	0	0.6592292089249493	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005569	Chromosome_1A	2050	3	58	37.02439024390244	0.8256944444444444	0.9510869565217391	51	0	1.335559265442404	14	0	0.8079552517091361	37	0	0.29296875	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005570	Chromosome_1A	8381	15	197	34.68559837728195	0.7816187233591307	0.5241450421034543	197	0	0.45861541821358376	81	0	0.5666525003541578	116	0	0.6391632771644393	33	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN005571	Chromosome_1A	8583	4	84	32.82069206571129	0.3651304594441293	3.931957612939208	84	0	0.13986013986013987	23	0	4.876349703935911	61	0	3.502974223397224	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005572	Chromosome_1A	786	1	48	50.25445292620865	0.9799480519480519	0.8982035928143712	38	0	0.8982035928143712	38	0	NA	NA	NA	0.42134831460674155	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017570	Chromosome_1A	168	1	2	44.642857142857146	0.24633431085043989	0	2	0	0	2	0	NA	NA	NA	2.107142857142857	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005573	Chromosome_1A	21669	14	431	34.39937237528266	0.6723599813828054	1.0825525449480882	289	0.02422145328719723	0.5306799336650083	60	0	1.2127376574602926	229	0.03056768558951965	0.8117859290438966	68	0	unmethylated (<10%)	Q86YT5	Na(+)/citrate cotransporter (NaCT) (Sodium-coupled citrate transporter) (Sodium-dependent citrate transporter) (Solute carrier family 13 member 5)	alpha-ketoglutarate transport [GO:0015742]; cellular response to lithium ion [GO:0071285]; citrate transport [GO:0015746]; fumarate transport [GO:0015741]; oxaloacetate transport [GO:0015729]; succinate transport [GO:0015744]; transmembrane transport [GO:0055085]	hit with GO BP
GN005574	Chromosome_1A	23839	7	401	33.239649314149084	0.6129541745622811	27.264540952069094	385	0.2649350649350649	0.6633499170812603	13	0	27.93772032902468	372	0.27419354838709675	68.3034309096632	59	0.6949152542372882	sparse (10-50%)	Q2PGG3	Serine racemase (AtSR) (EC 5.1.1.18) (D-serine ammonia-lyase) (D-serine dehydratase) (EC 4.3.1.18) (L-serine ammonia-lyase) (L-serine dehydratase) (EC 4.3.1.17)	D-serine biosynthetic process [GO:0070179]; L-serine metabolic process [GO:0006563]	hit with GO BP
GN005575	Chromosome_1A	1638	2	17	39.682539682539684	0.2637531257103887	89.73634651600753	17	1	89.73634651600753	17	1	NA	NA	NA	82.27146814404432	23	0.9565217391304348	methylated (>=50%)	Q80TL0	Protein phosphatase 1E (EC 3.1.3.16) (Ca(2+)/calmodulin-dependent protein kinase phosphatase N) (CaMKP-N) (CaMKP-nucleus) (CaMKN) (Partner of PIX 1) (Partner of PIX-alpha) (Partner of PIXA)	cellular response to lipopolysaccharide [GO:0071222]; cellular response to xenobiotic stimulus [GO:0071466]; negative regulation of protein kinase activity [GO:0006469]; peptidyl-threonine dephosphorylation [GO:0035970]; positive regulation of stress fiber assembly [GO:0051496]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN005576	Chromosome_1A	9633	6	105	33.613619848437665	0.3871895725072493	82.04427832087407	105	0.8380952380952381	66.39405204460967	25	0.68	85.79575833184816	80	0.8875	0.4294149221685454	36	0	methylated (>=50%)	P49593	Protein phosphatase 1F (EC 3.1.3.16) (Ca(2+)/calmodulin-dependent protein kinase phosphatase) (CaM-kinase phosphatase) (CaMKPase) (Partner of PIX 2) (Protein fem-2 homolog) (hFem-2)	cellular response to xenobiotic stimulus [GO:0071466]; intracellular signal transduction [GO:0035556]; negative regulation of cell-cell adhesion mediated by cadherin [GO:2000048]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of protein transport [GO:0051224]; positive regulation of cell migration [GO:0030335]; positive regulation of cell-substrate adhesion [GO:0010811]; positive regulation of chemotaxis [GO:0050921]; positive regulation of epithelial cell migration [GO:0010634]; positive regulation of focal adhesion assembly [GO:0051894]; positive regulation of gene expression [GO:0010628]; positive regulation of growth [GO:0045927]; positive regulation of stress fiber assembly [GO:0051496]; regulation of protein localization [GO:0032880]	hit with GO BP
GN005577	Chromosome_1A	1996	4	58	37.124248496993985	0.8434826958105647	0.477326968973747	56	0	0.3654970760233918	42	0	0.6108202443280978	14	0	0.5409304002884963	45	0	unmethylated (<10%)	P14003	Protein hairy	anterior/posterior pattern specification [GO:0009952]; cell morphogenesis [GO:0000902]; membrane organization [GO:0061024]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; open tracheal system development [GO:0007424]; periodic partitioning by pair rule gene [GO:0007366]; posterior head segmentation [GO:0035289]; regulation of neurogenesis [GO:0050767]; response to hypoxia [GO:0001666]; salivary gland morphogenesis [GO:0007435]; trunk segmentation [GO:0035290]; tube morphogenesis [GO:0035239]	hit with GO BP
GN001693	Chromosome_1A	1518	3	16	36.95652173913044	0.32592592592592595	80.1846590909091	16	0.875	79.82099267697315	14	0.8571428571428571	82.68156424581005	2	1	72.92358803986711	8	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001692	Chromosome_1A	243	1	6	46.91358024691358	0.4602272727272727	91.03139013452915	6	1	91.03139013452915	6	1	NA	NA	NA	90.2461257976299	44	1	methylated (>=50%)	Q0WVW7	ATP-dependent DNA helicase Q-like 5 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ5) (RecQ-like protein 5) (AtRecQ5) (AtRecQl5)	cellular response to water deprivation [GO:0042631]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN001685	Chromosome_1A	672	1	31	42.708333333333336	1.01609599063506	0.4677754677754678	31	0	0.4677754677754678	31	0	NA	NA	NA	0.7159401979364076	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001684	Chromosome_1A	28051	6	785	35.31068411108338	0.8981704354414717	1.144331778015275	731	0	0.5634861006761833	57	0	1.1876418027506233	674	0	0.9382716049382716	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001683	Chromosome_1A	531	1	15	45.76271186440678	0.5411005434782609	1.2195121951219512	14	0	1.2195121951219512	14	0	NA	NA	NA	0.5555555555555556	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001682	Chromosome_1A	306	1	25	54.90196078431372	1.1493389423076923	3.278688524590164	6	0	3.278688524590164	6	0	NA	NA	NA	0.91324200913242	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005580	Chromosome_1A	1799	4	48	51.473040578098946	0.4090185676392573	0.1984126984126984	23	0	0.2159827213822894	22	0	0	1	0	0.8421624558543874	107	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005581	Chromosome_1A	579	1	38	46.80483592400691	1.1983660130718954	0.7575757575757576	38	0	0.7575757575757576	38	0	NA	NA	NA	0.6946299759551162	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001679	Chromosome_1A	3123	4	58	37.36791546589817	0.5320272572402044	0.9155222638368706	58	0	0.635593220338983	22	0	1.0966415352981493	36	0	0.2788104089219331	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001678	Chromosome_1A	929	3	23	39.61248654467169	0.631580503088883	0.580046403712297	23	0	0.44709388971684055	18	0	1.0471204188481675	5	0	0.7509386733416771	12	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN001677	Chromosome_1A	522	1	21	47.509578544061306	0.7131147540983607	0.5853658536585366	21	0	0.5853658536585366	21	0	NA	NA	NA	0.6378802747791953	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001676	Chromosome_1A	478	3	20	44.14225941422594	0.8804568060416282	0.47619047619047616	20	0	0.6389776357827476	16	0	0	4	0	1.7730496453900708	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005584	Chromosome_1A	5327	4	146	34.25943307677868	0.934476063229025	1.4380406695876868	146	0	0.8595988538681948	32	0	1.5790944661822246	114	0	2.848575712143928	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001674	Chromosome_1A	878	2	24	37.58542141230068	0.7855358807082945	0.7352941176470589	24	0	0.42735042735042733	12	0	0.967741935483871	12	0	0.7874015748031497	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005585	Chromosome_1A	815	2	16	36.19631901840491	0.6009216589861751	0.24958402662229617	16	0	0.43859649122807015	9	0	0	7	0	0.27670171555063644	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005586	Chromosome_1A	22877	19	547	36.17170083489968	0.7320898680675868	0.7230632235084595	547	0	0.6782365848793138	109	0	0.7328072153325818	438	0	0.6956521739130435	50	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN005587	Chromosome_1A	1732	3	48	38.22170900692841	0.7621771775901427	1.0747872816838333	48	0	1.1964735516372795	39	0	0.7751937984496124	9	0	3.5143769968051117	43	0	unmethylated (<10%)	Q8C206	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN005588	Chromosome_1A	8063	3	239	36.12799206250775	0.9088176759102056	3.148226055251718	236	0	0.7688364941055869	44	0	3.525302574932987	192	0	0.4290171606864275	55	0	unmethylated (<10%)	Q8C206	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN005589	Chromosome_1A	5551	3	183	37.97513961448388	0.9157291520180003	0.5222929936305732	183	0	0.25220680958385877	41	0	0.590676883780332	142	0	0.56	44	0	unmethylated (<10%)	Q8C206	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN005590	Chromosome_1A	354	1	13	45.19774011299435	0.7208646616541353	0.3838771593090211	13	0	0.3838771593090211	13	0	NA	NA	NA	0.6403415154749199	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005591	Chromosome_1A	798	2	22	41.228070175438596	0.6538547486033519	1.192504258943782	20	0	1.4462809917355373	18	0	0	2	0	0.7164508128961147	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005592	Chromosome_1A	324	1	10	49.69135802469136	0.5043586550435866	NA	0	NA	NA	NA	NA	NA	NA	NA	3.7735849056603774	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005593	Chromosome_1A	324	1	10	49.69135802469136	0.5043586550435866	NA	0	NA	NA	NA	NA	NA	NA	NA	3.125	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005594	Chromosome_1A	9570	16	80	33.16614420062696	0.30609980628871974	63.36418072945019	80	0.65	67.47279322853689	25	0.76	61.60228156598392	55	0.6	50.78876490958061	31	0.45161290322580644	methylated (>=50%)	Q9Z2A7	Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20) (Acyl-CoA retinol O-fatty-acyltransferase) (ARAT) (Retinol O-fatty-acyltransferase) (EC 2.3.1.76) (Diglyceride acyltransferase)	diacylglycerol metabolic process [GO:0046339]; fatty acid homeostasis [GO:0055089]; glycerolipid metabolic process [GO:0046486]; insulin secretion [GO:0030073]; lipid storage [GO:0019915]; lipid transport [GO:0006869]; long-chain fatty-acyl-CoA metabolic process [GO:0035336]; monoacylglycerol biosynthetic process [GO:0006640]; poly-hydroxybutyrate biosynthetic process [GO:0042619]; positive regulation of fatty acid oxidation [GO:0046321]; positive regulation of hepatic stellate cell activation [GO:2000491]; positive regulation of triglyceride biosynthetic process [GO:0010867]; regulation of eating behavior [GO:1903998]; regulation of intestinal lipid absorption [GO:1904729]; regulation of vitamin A metabolic process [GO:1901738]; retinoid metabolic process [GO:0001523]; triglyceride biosynthetic process [GO:0019432]; very-low-density lipoprotein particle assembly [GO:0034379]	hit with GO BP
GN005595	Chromosome_1A	10360	8	151	34.37258687258687	0.4940893476868422	81.81405483929544	149	0.8926174496644296	75.02458210422812	17	0.8823529411764706	82.50475142542763	132	0.8939393939393939	9.669211195928753	31	0	methylated (>=50%)	Q2T9Q1	TBC1 domain family member 20	COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; host-mediated activation of viral genome replication [GO:0044829]; positive regulation by virus of viral protein levels in host cell [GO:0046726]; positive regulation of ER to Golgi vesicle-mediated transport [GO:1902953]; virion assembly [GO:0019068]	hit with GO BP
GN001668	Chromosome_1A	1912	3	38	31.746861924686193	0.7939505201503628	0.4056795131845842	36	0	0.1597444089456869	15	0	0.4893964110929853	21	0	45.33004041311181	61	0.2786885245901639	unmethylated (<10%)	Q9UBD0	Heat shock transcription factor, X-linked	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN001669	Chromosome_1A	8291	9	77	32.288023157640815	0.3566168913000733	63.55718985871879	76	0.7105263157894737	65.48431105047749	22	0.7272727272727273	62.79383950283707	54	0.7037037037037037	85.14538558786346	37	0.918918918918919	methylated (>=50%)	Q9H6D7	HAUS augmin-like complex subunit 4	centrosome cycle [GO:0007098]; regulation of microtubule nucleation [GO:0010968]; spindle assembly [GO:0051225]	hit with GO BP
GN005597	Chromosome_1A	13576	19	88	34.47259870359458	0.22675733001807888	80.28267318094574	87	0.9655172413793104	83.80758807588076	24	1	79.05992949471211	63	0.9523809523809523	88.15261044176707	26	0.9615384615384616	methylated (>=50%)	P83436	Conserved oligomeric Golgi complex subunit 7 (COG complex subunit 7) (Component of oligomeric Golgi complex 7)	glycoprotein biosynthetic process [GO:0009101]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]; protein localization to Golgi apparatus [GO:0034067]; protein localization to organelle [GO:0033365]; protein stabilization [GO:0050821]; retrograde transport, vesicle recycling within Golgi [GO:0000301]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN005598	Chromosome_1A	424	2	13	42.68867924528302	0.6730158730158731	0.19801980198019803	13	0	0.22321428571428573	12	0	0	1	0	0.9898812142542894	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005599	Chromosome_1A	617	2	23	41.3290113452188	0.8732923076923077	1.2422360248447204	23	0	1.2422360248447204	23	0	NA	NA	NA	0.9523809523809523	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005600	Chromosome_1A	757	2	23	45.70673712021136	0.5824440504465929	0.5154639175257731	23	0	0.5305039787798409	22	0	0	1	0	1.5818725951261223	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005601	Chromosome_1A	3209	3	45	36.49111872857588	0.4227065160119431	90.54514480408858	45	1	90.5683192261185	18	1	90.53254437869822	27	1	76.52439024390245	16	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005602	Chromosome_1A	7616	4	237	35.88497899159664	0.971983069649223	2.075486817853995	237	0	1.7157941047074352	60	0	2.1555947481873408	177	0	5.046403712296984	54	0	unmethylated (<10%)	Q24432	Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb) (Protein bifid)	cell fate specification [GO:0001708]; compound eye morphogenesis [GO:0001745]; developmental pigmentation [GO:0048066]; imaginal disc-derived wing morphogenesis [GO:0007476]; negative regulation of transcription by RNA polymerase II [GO:0000122]; organ growth [GO:0035265]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; wing disc anterior/posterior pattern formation [GO:0048100]; wing disc morphogenesis [GO:0007472]	hit with GO BP
GN005603	Chromosome_1A	3016	3	59	31.83023872679045	0.7725980053751536	2.164915631964343	58	0	3.091060985797828	30	0	1.5946502057613168	28	0	1.6305670479435386	59	0	unmethylated (<10%)	O73718	T-box transcription factor TBX3 (T-box protein 3)	anterior/posterior axis specification, embryo [GO:0008595]; cell fate specification [GO:0001708]; cellular senescence [GO:0090398]; embryonic digit morphogenesis [GO:0042733]; embryonic forelimb morphogenesis [GO:0035115]; female genitalia development [GO:0030540]; follicle-stimulating hormone secretion [GO:0046884]; luteinizing hormone secretion [GO:0032275]; male genitalia development [GO:0030539]; mesoderm morphogenesis [GO:0048332]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of myoblast differentiation [GO:0045662]; positive regulation of cell cycle [GO:0045787]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; skeletal system development [GO:0001501]	hit with GO BP
GN005604	Chromosome_1A	264	1	14	49.24242424242424	0.8918918918918919	1.0452961672473868	14	0	1.0452961672473868	14	0	NA	NA	NA	0.5859872611464968	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005605	Chromosome_1A	6054	6	180	37.24810042946812	0.8649161768184178	2.6099438862064464	180	0	2.3137121469887716	86	0	2.79424216765453	94	0	3.2823741007194243	69	0	unmethylated (<10%)	O73718	T-box transcription factor TBX3 (T-box protein 3)	anterior/posterior axis specification, embryo [GO:0008595]; cell fate specification [GO:0001708]; cellular senescence [GO:0090398]; embryonic digit morphogenesis [GO:0042733]; embryonic forelimb morphogenesis [GO:0035115]; female genitalia development [GO:0030540]; follicle-stimulating hormone secretion [GO:0046884]; luteinizing hormone secretion [GO:0032275]; male genitalia development [GO:0030539]; mesoderm morphogenesis [GO:0048332]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of myoblast differentiation [GO:0045662]; positive regulation of cell cycle [GO:0045787]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; skeletal system development [GO:0001501]	hit with GO BP
GN005606	Chromosome_1A	17961	21	191	34.13507043037693	0.36522420951772594	83.07120388904775	190	0.9473684210526315	85.55183946488295	37	0.972972972972973	82.7743536380373	153	0.9411764705882353	14.372109569548204	51	0.11764705882352941	methylated (>=50%)	Q9H6U6	BCAS3 microtubule associated cell migration factor (Breast carcinoma-amplified sequence 3) (GAOB1)	autophagy [GO:0006914]; cell-cell signaling [GO:0007267]; cellular response to estrogen stimulus [GO:0071391]; positive regulation of catalytic activity [GO:0043085]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of actin cytoskeleton organization [GO:0032956]; response to estrogen [GO:0043627]	hit with GO BP
GN005607	Chromosome_1A	520	2	14	39.80769230769231	0.6831831831831832	1.1516314779270633	14	0	1.1516314779270633	14	0	NA	NA	NA	0.6227002547410133	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005608	Chromosome_1A	1343	3	14	36.187639612807146	0.31841891342636497	18.11377245508982	14	0	18.86178861788618	13	0	9.433962264150944	1	0	18.625954198473284	10	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005609	Chromosome_1A	542	2	6	38.92988929889299	0.2970405553525758	19.461077844311376	6	0	19.461077844311376	6	0	NA	NA	NA	12.63573543928924	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005610	Chromosome_1A	627	1	18	48.165869218500795	0.5101016949152543	0.9230769230769231	18	0	0.9230769230769231	18	0	NA	NA	NA	0.6231916314266637	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005611	Chromosome_1A	870	1	31	41.49425287356322	0.8288770053475936	0.2552648372686662	31	0	0.2552648372686662	31	0	NA	NA	NA	1.021021021021021	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001657	Chromosome_1A	3022	5	103	38.352084712111186	0.9269386539606909	0.31421838177533384	102	0	0.31201248049922	35	0	0.31496062992125984	67	0	0.8285004142502072	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005612	Chromosome_1A	570	1	14	44.3859649122807	0.504424778761062	0.37593984962406013	14	0	0.37593984962406013	14	0	NA	NA	NA	0.3678724708767627	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005613	Chromosome_1A	210	1	3	43.80952380952381	0.3095823095823096	0.6097560975609756	3	0	0.6097560975609756	3	0	NA	NA	NA	0.8831168831168831	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005614	Chromosome_1A	388	2	13	44.845360824742265	0.6841177268411772	0.4576659038901602	13	0	0.5899705014749262	11	0	0	2	0	1.2286689419795223	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005615	Chromosome_1A	2319	7	76	38.852953859422165	0.8684965258956291	0.47074646940147946	76	0	0.3970880211780278	44	0	0.5468215994531784	32	0	0.9128630705394191	33	0	unmethylated (<10%)	P82251	b(0,+)-type amino acid transporter 1 (b(0,+)AT1) (Glycoprotein-associated amino acid transporter b0,+AT1) (Solute carrier family 7 member 9)	amino acid transmembrane transport [GO:0003333]; L-cystine transport [GO:0015811]; neutral amino acid transport [GO:0015804]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN005616	Chromosome_1A	789	1	27	40.55766793409379	0.8329618768328446	0.7625272331154684	27	0	0.7625272331154684	27	0	NA	NA	NA	0.5608974358974359	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005617	Chromosome_1A	462	1	14	36.36363636363637	0.9273118279569893	0.4484304932735426	14	0	0.4484304932735426	14	0	NA	NA	NA	0.9302325581395349	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005618	Chromosome_1A	669	1	21	49.775784753363226	0.5559116809116809	10.708117443868739	21	0	10.708117443868739	21	0	NA	NA	NA	8.333333333333334	28	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005619	Chromosome_1A	1266	1	52	40.28436018957346	1.0125507567368033	0.5291005291005291	52	0	0.5291005291005291	52	0	NA	NA	NA	0.5244272702180514	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001649	Chromosome_1A	18934	11	302	37.78916235343826	0.4478787499020913	88.54498651630301	298	0.9362416107382551	92.08657423063916	64	0.96875	87.7610599595778	234	0.9273504273504274	41.675075681130174	24	0.4583333333333333	methylated (>=50%)	Q6UB98	Ankyrin repeat domain-containing protein 12 (Ankyrin repeat-containing cofactor 2) (GAC-1 protein)	NA	hit, no GO BP
GN001648	Chromosome_1A	6420	8	89	36.29283489096573	0.4212011508614875	87.785501489573	89	0.9662921348314607	90.93959731543625	15	1	87.23776223776224	74	0.9594594594594594	93.84885764499121	10	1	methylated (>=50%)	Q6NX12	Nuclear pore complex protein Nup93 (93 kDa nucleoporin) (Nucleoporin Nup93)	nuclear pore complex assembly [GO:0051292]; poly(A)+ mRNA export from nucleus [GO:0016973]; protein import into nucleus [GO:0006606]	hit with GO BP
GN001647	Chromosome_1A	15333	14	178	35.635557294723796	0.3665096701703837	88.06836768073275	176	0.9261363636363636	79.75352112676056	26	0.7307692307692307	88.9199423007573	150	0.96	8.479834539813858	27	0	methylated (>=50%)	Q7ZX96	Nuclear pore complex protein Nup93 (93 kDa nucleoporin) (An4a) (Nucleoporin Nup93)	nuclear pore complex assembly [GO:0051292]; poly(A)+ mRNA export from nucleus [GO:0016973]; protein import into nucleus [GO:0006606]	hit with GO BP
GN005621	Chromosome_1A	15225	13	177	35.35632183908046	0.3758231689459254	80.07303077725614	175	0.9028571428571428	86.15179760319575	28	0.8928571428571429	78.94346158604479	147	0.9047619047619048	86.80872653475393	36	0.9444444444444444	methylated (>=50%)	Q9NX74	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like (EC 1.3.1.91) (Dihydrouridine synthase 2) (Up-regulated in lung cancer protein 8) (URLC8) (tRNA-dihydrouridine synthase 2-like) (hDUS2)	antiviral innate immune response [GO:0140374]; tRNA dihydrouridine synthesis [GO:0002943]	hit with GO BP
GN005622	Chromosome_1A	3429	5	40	35.81219014289881	0.3638244539052242	81.62801273306049	40	0.925	92.11538461538461	7	1	78.37998808814771	33	0.9090909090909091	86.46616541353383	19	0.9473684210526315	methylated (>=50%)	Q9H490	GPI-anchor transamidase component PIGU (Cell division cycle protein 91-like 1) (Protein CDC91-like 1) (GPI transamidase component PIG-U) (Phosphatidylinositol glycan anchor biosynthesis class U protein)	attachment of GPI anchor to protein [GO:0016255]; GPI anchor biosynthetic process [GO:0006506]; GPI anchored protein biosynthesis [GO:0180046]; regulation of receptor signaling pathway via JAK-STAT [GO:0046425]	hit with GO BP
GN005623	Chromosome_1A	4800	3	51	34.666666666666664	0.35555400630062617	81.1135716545397	51	0.9215686274509803	83.87622149837134	10	1	80.44758539458186	41	0.9024390243902439	92.09197980931015	31	1	methylated (>=50%)	P51452	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase VHR) (Vaccinia H1-related phosphatase) (VHR)	cellular response to epidermal growth factor stimulus [GO:0071364]; dephosphorylation [GO:0016311]; negative regulation of cell migration [GO:0030336]; negative regulation of chemotaxis [GO:0050922]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of JNK cascade [GO:0046329]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; peptidyl-tyrosine dephosphorylation [GO:0035335]; positive regulation of focal adhesion disassembly [GO:0120183]; positive regulation of mitotic cell cycle [GO:0045931]; regulation of focal adhesion assembly [GO:0051893]	hit with GO BP
GN001645	Chromosome_1A	21732	14	281	35.55586232284189	0.41235448527502194	76.24118720110437	277	0.8736462093862816	72.49303621169916	26	0.7692307692307693	76.52676818591819	251	0.8844621513944223	31.88131313131313	29	0.2413793103448276	methylated (>=50%)	Q8WNU8	Serine/threonine-protein kinase Nek11 (EC 2.7.11.1) (Never in mitosis A-related kinase 11) (NimA-related protein kinase 11)	intracellular signal transduction [GO:0035556]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; protein phosphorylation [GO:0006468]	hit with GO BP
GN005624	Chromosome_1A	1164	1	49	42.18213058419244	0.9602020202020202	0.6864988558352403	49	0	0.6864988558352403	49	0	NA	NA	NA	0.4245383145828911	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005625	Chromosome_1A	1059	1	29	38.432483474976394	0.7418115942028985	0.3929273084479371	29	0	0.3929273084479371	29	0	NA	NA	NA	0.5551149881046789	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001643	Chromosome_1A	819	2	15	38.94993894993895	0.48878013845786583	0.5961251862891207	15	0	0.338409475465313	14	0	2.5	1	0	0.8143322475570033	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001642	Chromosome_1A	1358	5	47	39.175257731958766	0.9094613850099743	0.39739884393063585	47	0	0.4228800356109504	37	0	0.28763183125599234	10	0	1.2676672009325367	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001641	Chromosome_1A	1776	1	61	40.03378378378378	0.8572649437384272	0.5141388174807198	61	0	0.5141388174807198	61	0	NA	NA	NA	0.6209150326797386	57	0	unmethylated (<10%)	Q9V477	Toll-like receptor Tollo (Toll-like receptor 8)	axis elongation [GO:0003401]; convergent extension [GO:0060026]; peripheral nervous system neuron development [GO:0048935]; regulation of glycoprotein biosynthetic process [GO:0010559]; signal transduction [GO:0007165]	hit with GO BP
GN005627	Chromosome_1A	653	2	22	45.635528330781014	0.6528516246307657	26.344086021505376	20	0	25.977653631284916	19	0	35.714285714285715	1	0	11.216977046340407	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005628	Chromosome_1A	6734	3	142	36.694386694386694	0.6264350195878045	72.51777396420691	142	0.7816901408450704	31.810490693739425	17	0.35294117647058826	75.69710585436765	125	0.84	19.674295774647888	25	0.24	methylated (>=50%)	Q5JPI3	Uncharacterized protein C3orf38	positive regulation of apoptotic process [GO:0043065]	hit with GO BP
GN005629	Chromosome_1A	357	1	14	50.98039215686274	0.6036231884057971	79.4409377817854	14	0.9285714285714286	79.4409377817854	14	0.9285714285714286	NA	NA	NA	77.51533742331289	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005630	Chromosome_1A	327	1	18	47.400611620795104	0.98001998001998	85.99088838268793	18	1	85.99088838268793	18	1	NA	NA	NA	84.95904690990321	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005631	Chromosome_1A	792	1	25	40.53030303030303	0.7689917663507845	24.357405140758875	25	0	24.357405140758875	25	0	NA	NA	NA	6.072607260726072	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001615	Chromosome_1A	712	2	7	35.39325842696629	0.31634401777213583	0	7	0	0	6	0	0	1	0	0.7032348804500703	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005632	Chromosome_1A	315	1	11	49.20634920634921	0.5809859154929577	5.154639175257732	11	0	5.154639175257732	11	0	NA	NA	NA	6.152512998266897	25	0	unmethylated (<10%)	Q9I7F7	Activated Cdc42 kinase-like (EC 2.7.10.2) (Tyrosine-protein kinase PR2)	dorsal closure, amnioserosa morphology change [GO:0046664]; head involution [GO:0008258]; myosin filament assembly [GO:0031034]; protein phosphorylation [GO:0006468]	hit with GO BP
GN001618	Chromosome_1A	3686	2	102	36.597938144329895	0.8295427466970267	0.560860997423071	102	0	0.624699663623258	65	0	0.4517453798767967	37	0	0.5947660586835845	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001619	Chromosome_1A	2379	1	72	38.08322824716267	0.8370497427101201	0.571256764882742	72	0	0.571256764882742	72	0	NA	NA	NA	0.5714285714285714	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005634	Chromosome_1A	2847	4	31	34.49244819107833	0.3690522486357649	5.926481620405101	31	0	6.923076923076923	13	0	4.978038067349927	18	0	0.7889546351084813	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005635	Chromosome_1A	10520	2	262	38.22243346007605	0.6821062676543973	0.589407991678946	261	0	0.4267425320056899	75	0	0.6831534362617844	186	0	0.7081038552321007	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001621	Chromosome_1A	3712	5	27	40.4364224137931	0.17975786924939469	75.84396099024757	27	0.8518518518518519	79.88165680473372	12	0.9166666666666666	73.36561743341404	15	0.8	17.67723880597015	43	0.13953488372093023	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001622	Chromosome_1A	189	1	7	48.67724867724868	0.670892494929006	0.3952569169960474	7	0	0.3952569169960474	7	0	NA	NA	NA	0.922266139657444	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005637	Chromosome_1A	288	1	7	43.40277777777778	0.6098003629764065	42.135642135642136	7	0.2857142857142857	42.135642135642136	7	0.2857142857142857	NA	NA	NA	31.235154394299286	8	0.125	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005638	Chromosome_1A	2208	1	65	37.36413043478261	0.8520844960043696	0.5882352941176471	65	0	0.5882352941176471	65	0	NA	NA	NA	0.7773851590106007	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005639	Chromosome_1A	1630	2	29	38.895705521472394	0.4743697816313423	0.411522633744856	29	0	0.4175365344467641	22	0	0.38910505836575876	7	0	0.6550218340611353	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005640	Chromosome_1A	7340	9	179	36.23978201634878	0.7444257027611845	0.8505330006804264	179	0	0.31992687385740404	45	0	1.0256410256410255	134	0	0.9084302325581395	61	0	unmethylated (<10%)	P31228	D-aspartate oxidase (DASOX) (DASPO) (DDO) (EC 1.4.3.1)	aspartate metabolic process [GO:0006531]; D-amino acid catabolic process [GO:0019478]; nervous system process [GO:0050877]	hit with GO BP
GN005641	Chromosome_1A	697	2	19	39.31133428981349	0.7079925153702219	0.778816199376947	16	0	0.778816199376947	16	0	NA	NA	NA	7.857469164001827	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005642	Chromosome_1A	566	2	16	39.92932862190813	0.7202736021633659	2.9535864978902953	7	0	3.2967032967032965	6	0	1.8181818181818181	1	0	1.2536873156342183	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005643	Chromosome_1A	398	2	5	36.93467336683417	0.3692022263450835	90.33613445378151	5	1	90.65934065934066	4	1	89.28571428571429	1	1	81.98278420896409	40	1	methylated (>=50%)	O88554	Poly [ADP-ribose] polymerase 2 (PARP-2) (mPARP-2) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 2) (ARTD2) (DNA ADP-ribosyltransferase PARP2) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 2) (ADPRT-2) (Poly[ADP-ribose] synthase 2) (pADPRT-2) (Protein poly-ADP-ribosyltransferase PARP2) (EC 2.4.2.-)	base-excision repair [GO:0006284]; decidualization [GO:0046697]; DNA ADP-ribosylation [GO:0030592]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA repair-dependent chromatin remodeling [GO:0140861]; extrinsic apoptotic signaling pathway [GO:0097191]; hippocampal neuron apoptotic process [GO:0110088]; positive regulation of cell growth involved in cardiac muscle cell development [GO:0061051]; protein auto-ADP-ribosylation [GO:0070213]; protein localization to chromatin [GO:0071168]; protein poly-ADP-ribosylation [GO:0070212]; response to oxygen-glucose deprivation [GO:0090649]	hit with GO BP
GN005644	Chromosome_1A	15478	15	160	35.01098333117974	0.34320622197091905	89.06110814181365	159	0.9874213836477987	90.48117154811716	29	1	88.76959415933004	130	0.9846153846153847	90.13724121888811	74	1	methylated (>=50%)	O88554	Poly [ADP-ribose] polymerase 2 (PARP-2) (mPARP-2) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 2) (ARTD2) (DNA ADP-ribosyltransferase PARP2) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 2) (ADPRT-2) (Poly[ADP-ribose] synthase 2) (pADPRT-2) (Protein poly-ADP-ribosyltransferase PARP2) (EC 2.4.2.-)	base-excision repair [GO:0006284]; decidualization [GO:0046697]; DNA ADP-ribosylation [GO:0030592]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA repair-dependent chromatin remodeling [GO:0140861]; extrinsic apoptotic signaling pathway [GO:0097191]; hippocampal neuron apoptotic process [GO:0110088]; positive regulation of cell growth involved in cardiac muscle cell development [GO:0061051]; protein auto-ADP-ribosylation [GO:0070213]; protein localization to chromatin [GO:0071168]; protein poly-ADP-ribosylation [GO:0070212]; response to oxygen-glucose deprivation [GO:0090649]	hit with GO BP
GN005645	Chromosome_1A	807	1	17	39.77695167286245	0.5340625973217066	92.90123456790124	17	1	92.90123456790124	17	1	NA	NA	NA	68.69479882237488	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005646	Chromosome_1A	2410	6	39	33.7344398340249	0.5777174046664864	35	39	0.2564102564102564	33.27412670219064	27	0.2962962962962963	36.83218101822753	12	0.16666666666666666	1.2532042153232696	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005647	Chromosome_1A	1077	1	23	39.27576601671309	0.5632845188284519	0.41841004184100417	10	0	0.41841004184100417	10	0	NA	NA	NA	1.231190150478796	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005648	Chromosome_1A	2937	6	35	35.103847463398026	0.3876306620209059	3.769230769230769	35	0	4.545454545454546	23	0	2.559055118110236	12	0	0.7083065035415326	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005649	Chromosome_1A	453	1	18	43.26710816777042	0.8753623188405797	0.7366482504604052	18	0	0.7366482504604052	18	0	NA	NA	NA	0.703351261894911	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005650	Chromosome_1A	1059	1	34	40.98205854579792	0.7648970747562297	0.43252595155709345	34	0	0.43252595155709345	34	0	NA	NA	NA	0.9227929867733006	62	0	unmethylated (<10%)	Q20929	G protein-coupled receptor dmsr-1 (Dromyosuppressin receptor related 1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of cellular response to heat [GO:1900034]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]	hit with GO BP
GN005651	Chromosome_1A	2300	3	42	35.56521739130435	0.5778168571787464	52.16849451645065	42	0.47619047619047616	53.15947843530592	8	0.5	51.840796019900495	34	0.47058823529411764	9.591474245115453	52	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005652	Chromosome_1A	4002	3	64	34.50774612693653	0.5373682951698788	80.83169291338582	63	0.9841269841269841	86.54708520179372	5	1	80.49986982556626	58	0.9827586206896551	69.6921862667719	26	0.8461538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005653	Chromosome_1A	3300	5	24	36.696969696969695	0.2170909808565226	63.51471900089206	24	0.75	68.72909698996655	13	0.7692307692307693	57.55258126195029	11	0.7272727272727273	82.25957049486462	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005654	Chromosome_1A	408	1	15	45.588235294117645	0.7351351351351352	0.43591979075850046	15	0	0.43591979075850046	15	0	NA	NA	NA	0.3003003003003003	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005655	Chromosome_1A	1573	2	42	38.77940241576605	0.7103183562881011	0.6806579693703914	42	0	0.7482993197278912	37	0	0.3412969283276451	5	0	0.5317263381779511	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005656	Chromosome_1A	12672	7	280	35.29040404040404	0.7148914564450664	0.5047856299986889	279	0	0.6650041562759768	43	0	0.4747820672478207	236	0	0.43149946062567424	53	0	unmethylated (<10%)	P43004	Excitatory amino acid transporter 2 (Glutamate/aspartate transporter II) (Sodium-dependent glutamate/aspartate transporter 2) (Solute carrier family 1 member 2)	amino acid transport [GO:0006865]; cellular response to cocaine [GO:0071314]; chemical synaptic transmission [GO:0007268]; D-aspartate import across plasma membrane [GO:0070779]; glutathione biosynthetic process [GO:0006750]; intracellular glutamate homeostasis [GO:0090461]; L-aspartate import across plasma membrane [GO:0140009]; L-aspartate transmembrane transport [GO:0070778]; L-glutamate import across plasma membrane [GO:0098712]; L-glutamate transmembrane transport [GO:0015813]; neurotransmitter reuptake [GO:0098810]; neurotransmitter transport [GO:0006836]; protein homotrimerization [GO:0070207]; transepithelial transport [GO:0070633]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN005657	Chromosome_1A	9229	8	147	34.088200238379024	0.5487852531430513	89.20321563040602	147	1	94.24326833797586	21	1	88.58285714285714	126	1	88.74680306905371	11	1	methylated (>=50%)	Q9YHZ6	Cell division control protein 45 homolog	DNA replication initiation [GO:0006270]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication preinitiation complex assembly [GO:1902977]	hit with GO BP
GN005658	Chromosome_1A	315	1	12	45.3968253968254	0.747626582278481	0.5243445692883895	12	0	0.5243445692883895	12	0	NA	NA	NA	6.9875222816399285	53	0.16981132075471697	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005659	Chromosome_1A	9770	7	68	35.9467758444217	0.23380839226992206	88.59784283513098	68	0.9852941176470589	89.57871396895787	8	1	88.52459016393442	60	0.9833333333333333	89.22716627634661	15	1	methylated (>=50%)	Q92890	Ubiquitin recognition factor in ER-associated degradation protein 1 (Ubiquitin fusion degradation protein 1) (UB fusion protein 1)	cellular response to misfolded protein [GO:0071218]; ERAD pathway [GO:0036503]; negative regulation of RIG-I signaling pathway [GO:0039536]; negative regulation of type I interferon production [GO:0032480]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; rescue of stalled cytosolic ribosome [GO:0072344]; retrograde protein transport, ER to cytosol [GO:0030970]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]; skeletal system development [GO:0001501]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN001614	Chromosome_1A	2175	1	0	38.206896551724135	0	NA	0	NA	NA	NA	NA	NA	NA	NA	88.47058823529412	22	1	NA	NA	NA	NA	no Swiss-Prot hit
GN005660	Chromosome_1A	1473	2	13	36.45621181262729	0.26602483954321915	91.06901217861976	13	1	92.53393665158372	8	1	88.88888888888889	5	1	85.61746987951807	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005661	Chromosome_1A	4345	8	77	35.62715765247411	0.5623130189250058	89.13696865607557	75	1	90.4424778761062	10	1	88.95675543611043	65	1	72.14022140221402	11	0.9090909090909091	methylated (>=50%)	O96017	Serine/threonine-protein kinase Chk2 (EC 2.7.11.1) (CHK2 checkpoint homolog) (Cds1 homolog) (Hucds1) (hCds1) (Checkpoint kinase 2)	cellular response to stress [GO:0033554]; DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; double-strand break repair [GO:0006302]; G2/M transition of mitotic cell cycle [GO:0000086]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; mitotic DNA damage checkpoint signaling [GO:0044773]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; mitotic spindle assembly [GO:0090307]; positive regulation of autophagosome assembly [GO:2000786]; positive regulation of DNA-templated transcription [GO:0045893]; protein autophosphorylation [GO:0046777]; protein catabolic process [GO:0030163]; protein phosphorylation [GO:0006468]; protein stabilization [GO:0050821]; regulation of autophagosome assembly [GO:2000785]; regulation of DNA-templated transcription [GO:0006355]; regulation of protein catabolic process [GO:0042176]; regulation of signal transduction by p53 class mediator [GO:1901796]; replicative senescence [GO:0090399]; response to oxidative stress [GO:0006979]; response to starvation [GO:0042594]; signal transduction in response to DNA damage [GO:0042770]	hit with GO BP
GN005662	Chromosome_1A	267	1	11	43.445692883895134	0.8946085897045385	0.75	11	0	0.75	11	0	NA	NA	NA	57.407407407407405	27	0.6666666666666666	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001611	Chromosome_1A	761	3	31	43.49540078843627	0.8622441520467836	0.27548209366391185	31	0	0.1718213058419244	25	0	0.6944444444444444	6	0	0.8757525998905309	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001610	Chromosome_1A	3326	4	107	40.52916416115454	0.786912577307734	0.5648121999435188	97	0	0.3080082135523614	39	0	0.6622516556291391	58	0	0.5347593582887701	48	0	unmethylated (<10%)	P93159	Glucan endo-1,3-beta-D-glucosidase (Endo-1,3-beta-glucanase) (EC 3.2.1.39) (Beta-glucan elicitor-binding protein) (GEBP) (Laminarinase)	cell wall polysaccharide catabolic process [GO:0044347]; detection of symbiotic fungus [GO:0009603]	hit with GO BP
GN005663	Chromosome_1A	873	1	20	47.30813287514319	0.4143725080691095	2	16	0	2	16	0	NA	NA	NA	0.5761843790012804	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005664	Chromosome_1A	15459	17	455	37.272786079306556	0.8497075366394619	0.5175531583213818	434	0	0.5191256830601093	162	0	0.517088147370122	272	0	0.6105225354641767	70	0	unmethylated (<10%)	P93159	Glucan endo-1,3-beta-D-glucosidase (Endo-1,3-beta-glucanase) (EC 3.2.1.39) (Beta-glucan elicitor-binding protein) (GEBP) (Laminarinase)	cell wall polysaccharide catabolic process [GO:0044347]; detection of symbiotic fungus [GO:0009603]	hit with GO BP
GN005665	Chromosome_1A	600	2	19	40.666666666666664	0.7722007722007722	0.5870841487279843	19	0	0.5714285714285714	18	0	0.7518796992481203	1	0	1.278772378516624	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005666	Chromosome_1A	1206	1	48	39.88391376451078	1.0194420963651734	0.5174035747883349	48	0	0.5174035747883349	48	0	NA	NA	NA	0.6120664529291752	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005667	Chromosome_1A	2858	3	60	36.4590622813156	0.6318535550053059	95.47607768829938	60	1	98.53801169590643	6	1	95.20618556701031	54	1	45.6125595738716	58	0.5517241379310345	methylated (>=50%)	P99027	Large ribosomal subunit protein P2 (60S acidic ribosomal protein P2)	cytoplasmic translation [GO:0002181]; cytoplasmic translational elongation [GO:0002182]; negative regulation of myoblast fusion [GO:1901740]; spermatogenesis [GO:0007283]; striated muscle contraction [GO:0006941]; translation at postsynapse [GO:0140242]; translation at presynapse [GO:0140236]	hit with GO BP
GN005668	Chromosome_1A	8165	4	202	36.71769748928353	0.7340779462392153	81.78588187973453	202	0.9405940594059405	90.88729016786571	8	1	81.52413793103449	194	0.9381443298969072	14.887031878675332	48	0.16666666666666666	methylated (>=50%)	Q16RX1	Mediator of RNA polymerase II transcription subunit 21 (Mediator complex subunit 21)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005669	Chromosome_1A	18946	30	242	35.96537527710335	0.39701193218225583	89.34730408207815	242	0.9504132231404959	94.26008968609865	101	0.9900990099009901	86.98696542066142	141	0.9219858156028369	1.1950027159152634	33	0	methylated (>=50%)	Q68FD5	Clathrin heavy chain 1	amyloid-beta clearance by transcytosis [GO:0150093]; clathrin coat assembly [GO:0048268]; clathrin coat disassembly [GO:0072318]; clathrin-dependent endocytosis [GO:0072583]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]; mitotic cell cycle [GO:0000278]; mitotic spindle assembly [GO:0090307]; negative regulation of hyaluronan biosynthetic process [GO:1900126]; negative regulation of protein localization to plasma membrane [GO:1903077]; receptor internalization [GO:0031623]; receptor-mediated endocytosis [GO:0006898]; regulation of mitotic spindle organization [GO:0060236]; retrograde transport, endosome to Golgi [GO:0042147]; synaptic vesicle endocytosis [GO:0048488]; transferrin transport [GO:0033572]	hit with GO BP
GN001607	Chromosome_1A	1358	3	25	39.617083946980856	0.4691753845303409	0.6963788300835655	24	0	1.1363636363636365	14	0	0.273224043715847	10	0	6.492248062015504	57	0.03508771929824561	unmethylated (<10%)	Q3UPR9	Somatomedin-B and thrombospondin type-1 domain-containing protein (RPE-spondin)	NA	hit, no GO BP
GN001608	Chromosome_1A	354	1	13	48.30508474576271	0.6679245283018868	85.02772643253235	13	0.9230769230769231	85.02772643253235	13	0.9230769230769231	NA	NA	NA	26.136363636363637	15	0.13333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001602	Chromosome_1A	37201	27	441	34.78132308271283	0.39411603072125534	72.61514383663736	439	0.7813211845102506	85.18306636155606	66	0.8787878787878788	70.73264781491002	373	0.7640750670241286	0.6800286327845383	41	0	methylated (>=50%)	Q7PPA5	Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type (EC 7.2.2.10) (Calcium pump) (Sarcoplasmic/endoplasmic reticulum Ca(2+)-ATPase)	calcium ion transmembrane transport [GO:0070588]; intracellular calcium ion homeostasis [GO:0006874]	hit with GO BP
GN001605	Chromosome_1A	1937	9	58	39.80382034073309	0.7601320721525325	3.0827474310438077	57	0	2.129221732745962	44	0	5.749486652977413	13	0	0.5349182763744428	57	0	unmethylated (<10%)	P56839	Phosphoenolpyruvate phosphomutase (PEP mutase) (PEP phosphomutase) (Phosphoenolpyruvate mutase) (EC 5.4.2.9)	organic phosphonate biosynthetic process [GO:0032923]	hit with GO BP
GN005672	Chromosome_1A	3266	5	106	37.56889161053276	0.9209299851032134	1.1506061228682967	106	0	1.2909632571996028	41	0	1.0515247108307044	65	0	1.278772378516624	6	0	unmethylated (<10%)	Q8CJ44	Na(+)/citrate cotransporter (NaCT) (Sodium-coupled citrate transporter) (Sodium-dependent citrate transporter) (Solute carrier family 13 member 5)	alpha-ketoglutarate transport [GO:0015742]; cellular response to lithium ion [GO:0071285]; citrate transport [GO:0015746]; fumarate transport [GO:0015741]; oxaloacetate transport [GO:0015729]; succinate transport [GO:0015744]; transmembrane transport [GO:0055085]; tricarboxylic acid transport [GO:0006842]	hit with GO BP
GN001603	Chromosome_1A	159	1	7	45.911949685534594	0.8961352657004831	10.350877192982455	7	0	10.350877192982455	7	0	NA	NA	NA	7.335581787521079	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001600	Chromosome_1A	11987	13	316	37.549011429048136	0.7481008598270235	0.9461426491994177	316	0	0.7686395080707148	62	0	0.9830562659846548	254	0	1.9498607242339834	29	0	unmethylated (<10%)	Q86YT5	Na(+)/citrate cotransporter (NaCT) (Sodium-coupled citrate transporter) (Sodium-dependent citrate transporter) (Solute carrier family 13 member 5)	alpha-ketoglutarate transport [GO:0015742]; cellular response to lithium ion [GO:0071285]; citrate transport [GO:0015746]; fumarate transport [GO:0015741]; oxaloacetate transport [GO:0015729]; succinate transport [GO:0015744]; transmembrane transport [GO:0055085]	hit with GO BP
GN001599	Chromosome_1A	8688	8	271	36.452578268876614	0.9414666330778182	12.443420948145794	271	0.05166051660516605	26.5625	35	0	10.100916581797982	236	0.059322033898305086	0.48997772828507796	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001598	Chromosome_1A	2235	1	108	45.01118568232662	0.9540975442008277	0.46395431834404	108	0	0.46395431834404	108	0	NA	NA	NA	0.7296607077708865	51	0	unmethylated (<10%)	M9PH32	Protein meiotic P26	protein ubiquitination [GO:0016567]	hit with GO BP
GN005675	Chromosome_1A	16583	12	406	36.163540975698005	0.7490221557186006	4.592754367934224	348	0.031609195402298854	7.7894736842105265	33	0.06060606060606061	4.1483757682177345	315	0.02857142857142857	0.8160489629377763	57	0	unmethylated (<10%)	O43586	Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1) (CD2-binding protein 1) (H-PIP)	cell adhesion [GO:0007155]; signal transduction [GO:0007165]	hit with GO BP
GN005676	Chromosome_1A	19676	18	375	35.69323033136816	0.600692353194892	84.85809295491454	375	0.9786666666666667	85.09378084896348	29	0.9310344827586207	84.83806007719416	346	0.9826589595375722	47.91779340183883	49	0.4897959183673469	methylated (>=50%)	A6QPU5	Aspartate--tRNA ligase, mitochondrial (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)	aspartyl-tRNA aminoacylation [GO:0006422]; mitochondrial asparaginyl-tRNA aminoacylation [GO:0070145]	hit with GO BP
GN005677	Chromosome_1A	6638	7	74	35.402229587225065	0.3568153554700666	90.02701018076044	74	0.9594594594594594	86.84790595150625	21	0.9047619047619048	91.28041714947857	53	0.9811320754716981	49.81262611703661	42	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005678	Chromosome_1A	12772	12	214	36.94801127466333	0.49399818899189024	85.82078535577207	213	0.9671361502347418	88.9475227206098	60	0.95	84.76866923152807	153	0.9738562091503268	91.49064574532288	24	1	methylated (>=50%)	Q6XV80	Nibrin (Nijmegen breakage syndrome protein 1 homolog) (xNBS1)	DNA double-strand break processing [GO:0000729]; DNA strand resection involved in replication fork processing [GO:0110025]; double-strand break repair [GO:0006302]; double-strand break repair via homologous recombination [GO:0000724]; isotype switching [GO:0045190]; metaphase chromosome alignment [GO:0051310]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; protection from non-homologous end joining at telomere [GO:0031848]; protein localization to site of double-strand break [GO:1990166]; R-loop processing [GO:0062176]; regulation of fibroblast proliferation [GO:0048145]; telomere maintenance [GO:0000723]; telomere maintenance in response to DNA damage [GO:0043247]	hit with GO BP
GN005679	Chromosome_1A	1332	1	9	39.489489489489486	0.2012591286829514	53.9426523297491	9	0.7777777777777778	53.9426523297491	9	0.7777777777777778	NA	NA	NA	1.4539579967689822	45	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005680	Chromosome_1A	3897	6	31	32.92276109828073	0.29646617094898037	88.74113475177305	31	0.967741935483871	89.36915887850468	14	1	88.35714285714286	17	0.9411764705882353	86.30897317298798	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005681	Chromosome_1A	462	1	18	49.78354978354978	0.6382684780105917	0.22624434389140272	18	0	0.22624434389140272	18	0	NA	NA	NA	0.6	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005682	Chromosome_1A	468	1	16	50	0.5549544208107908	0.5882352941176471	16	0	0.5882352941176471	16	0	NA	NA	NA	0.6740196078431373	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005683	Chromosome_1A	336	1	8	49.107142857142854	0.40275696733593047	0.8695652173913043	8	0	0.8695652173913043	8	0	NA	NA	NA	0.49627791563275436	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001588	Chromosome_1A	5579	6	142	34.64778634163829	0.8482300212213293	0.9473137814689853	142	0	0.7402837754472548	44	0	1.0024650780608053	98	0	1.097972972972973	34	0	unmethylated (<10%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN001587	Chromosome_1A	1994	3	43	37.211634904714145	0.6265079608642597	0.514018691588785	43	0	0.16638935108153077	18	0	0.649772579597141	25	0	0.7038948850305021	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005684	Chromosome_1A	3393	4	118	37.57736516357206	0.9857398206644574	0.6281626243238527	118	0	0.9672961768770152	55	0	0.42134831460674155	63	0	0.42841842199214564	34	0	unmethylated (<10%)	P05099	Matrilin-1 (Cartilage matrix protein)	NA	hit, no GO BP
GN005685	Chromosome_1A	3358	5	107	39.24955330553901	0.8317711359632574	0.5819592628516004	107	0	0.5017921146953405	43	0	0.622938805423232	64	0	0.6568144499178982	43	0	unmethylated (<10%)	Q8C6K9	Collagen alpha-6(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN005686	Chromosome_1A	11941	16	166	35.574909974039024	0.44477788099501414	89.01111235828937	163	0.9754601226993865	86.86868686868686	27	1	89.51010240797122	136	0.9705882352941176	87.19590268886043	30	0.9333333333333333	methylated (>=50%)	Q96EP1	E3 ubiquitin-protein ligase CHFR (EC 2.3.2.27) (Checkpoint with forkhead and RING finger domains protein) (RING finger protein 196) (RING-type E3 ubiquitin transferase CHFR)	meiotic spindle checkpoint signaling [GO:0044779]; mitotic G2/M transition checkpoint [GO:0044818]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN005687	Chromosome_1A	16747	8	398	37.60673553472264	0.6722370861771405	0.8251092056301569	397	0	0.5111354508944871	66	0	0.8795241710959251	331	0	0.7683863885839737	35	0	unmethylated (<10%)	Q29486	Alkaline phosphatase, tissue-nonspecific isozyme (AP-TNAP) (TNSALP) (EC 3.1.3.1) (Alkaline phosphatase liver/bone/kidney isozyme) (Phosphoamidase) (Phosphocreatine phosphatase) (EC 3.9.1.1)	bone mineralization [GO:0030282]; dephosphorylation [GO:0016311]; positive regulation of cold-induced thermogenesis [GO:0120162]	hit with GO BP
GN005688	Chromosome_1A	252	1	12	41.666666666666664	1.1524390243902438	0.26666666666666666	2	0	0.26666666666666666	2	0	NA	NA	NA	0.4059040590405904	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001573	Chromosome_1A	7947	3	209	39.56209890524726	0.6721695937009812	0.6838506049447659	197	0	0.16025641025641027	13	0	0.7306590257879656	184	0	0.7394957983193278	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001574	Chromosome_1A	279	1	13	46.59498207885304	0.8617248752672844	0.4694835680751174	13	0	0.4694835680751174	13	0	NA	NA	NA	0.4633920296570899	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005690	Chromosome_1A	17265	18	208	35.73124818997973	0.37989675954978397	65.62242374278648	202	0.7574257425742574	83.63636363636364	104	0.875	55.56840077071291	98	0.6326530612244898	25.14450867052023	11	0.18181818181818182	methylated (>=50%)	Q9I7F7	Activated Cdc42 kinase-like (EC 2.7.10.2) (Tyrosine-protein kinase PR2)	dorsal closure, amnioserosa morphology change [GO:0046664]; head involution [GO:0008258]; myosin filament assembly [GO:0031034]; protein phosphorylation [GO:0006468]	hit with GO BP
GN001576	Chromosome_1A	5877	3	68	38.94844308320572	0.3064270269441335	75.41278895226658	68	0.8823529411764706	74.4408945686901	53	0.8867924528301887	77.28070175438596	15	0.8666666666666667	81.97802197802197	24	0.9583333333333334	methylated (>=50%)	Q9ULI1	NACHT and WD repeat domain-containing protein 2 (Leucine-rich repeat and WD repeat-containing protein KIAA1239)	NA	hit, no GO BP
GN001577	Chromosome_1A	1915	4	22	37.806788511749346	0.33631893220934317	90.45412418906395	22	1	90.51724137931035	5	1	90.43683589138135	17	1	83.27781479013991	22	0.9090909090909091	methylated (>=50%)	A6H603	NACHT domain- and WD repeat-containing protein 1	intracellular signal transduction [GO:0035556]; positive regulation of gene expression [GO:0010628]	hit with GO BP
GN005691	Chromosome_1A	14993	9	215	37.710931768158474	0.4052720525668904	93.65665649590493	215	0.986046511627907	95.26493799323562	93	1	92.76717795236314	122	0.9754098360655737	91.90361445783132	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005692	Chromosome_1A	2472	2	14	34.78964401294498	0.19017056444522595	69.88505747126437	14	0.9285714285714286	70.4370179948586	13	0.9230769230769231	65.21739130434783	1	1	86.00299401197604	23	0.9130434782608695	methylated (>=50%)	Q07912	Activated CDC42 kinase 1 (ACK-1) (EC 2.7.10.2) (EC 2.7.11.1) (Tyrosine kinase non-receptor protein 2)	cell surface receptor signaling pathway [GO:0007166]; phosphorylation [GO:0016310]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; regulation of clathrin-dependent endocytosis [GO:2000369]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN005693	Chromosome_1A	1143	1	25	45.23184601924759	0.42982851985559567	92.58883248730965	25	0.96	92.58883248730965	25	0.96	NA	NA	NA	90.34482758620689	45	1	methylated (>=50%)	O54967	Activated CDC42 kinase 1 (ACK-1) (EC 2.7.10.2) (EC 2.7.11.1) (Non-receptor protein tyrosine kinase Ack) (Tyrosine kinase non-receptor protein 2)	phosphorylation [GO:0016310]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; regulation of clathrin-dependent endocytosis [GO:2000369]; signal transduction [GO:0007165]; spermatid development [GO:0007286]	hit with GO BP
GN005694	Chromosome_1A	2358	3	68	38.21034775233249	0.7911268119874876	0.645359557467732	68	0	0.3080082135523614	33	0	0.7894736842105263	35	0	0.5750431282346176	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005695	Chromosome_1A	5505	5	68	35.02270663033606	0.4065236655546289	88.60329776915616	68	0.9558823529411765	87.62035763411279	14	0.9285714285714286	88.81365911098028	54	0.9629629629629629	76.01626016260163	43	0.9069767441860465	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005696	Chromosome_1A	1552	2	59	41.881443298969074	0.8720761904761904	0.9958992384299942	59	0	0.4143646408839779	14	0	1.1524163568773234	45	0	0.5333333333333333	62	0	unmethylated (<10%)	P14943	Cocaine esterase (EC 3.1.1.84) (Liver carboxylesterase 2) (EC 3.1.1.1)	NA	hit, no GO BP
GN005697	Chromosome_1A	201	1	15	55.72139303482587	0.9930830039525692	1.1037527593818985	15	0	1.1037527593818985	15	0	NA	NA	NA	1.697866782760122	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005698	Chromosome_1A	37126	36	723	36.465011043473574	0.5874953380504384	76.06839611577614	722	0.7839335180055401	87.23641949448401	304	0.8552631578947368	70.41890364509749	418	0.7320574162679426	5.18768452129903	65	0	methylated (>=50%)	O15943	Neural-cadherin (Cadherin-N) (dN-cadherin)	axon extension [GO:0048675]; axon extension involved in axon guidance [GO:0048846]; axon guidance [GO:0007411]; axon target recognition [GO:0007412]; axonal fasciculation [GO:0007413]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of dendrite morphogenesis [GO:0050774]; ommatidial rotation [GO:0016318]; R7 cell development [GO:0045467]; R8 cell development [GO:0045463]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of dendrite morphogenesis [GO:0048814]; retinal ganglion cell axon guidance [GO:0031290]	hit with GO BP
GN005699	Chromosome_1A	1629	3	27	49.66236955187232	0.2787827696364282	42.3780487804878	13	0.38461538461538464	31.5	11	0.36363636363636365	59.375	2	0.5	65.59865092748736	60	0.8	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001560	Chromosome_1A	384	1	24	53.645833333333336	0.8769626034827291	0.9538950715421304	24	0	0.9538950715421304	24	0	NA	NA	NA	0.5502392344497608	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005701	Chromosome_1A	7800	5	219	38.3974358974359	0.7618186245521272	0.714711137581894	217	0	0.8163265306122449	23	0	0.7001847709812311	194	0	0.425273390036452	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001556	Chromosome_1A	350	2	8	38.57142857142857	0.6269592476489029	0.5669737774627923	8	0	0.4889975550122249	7	0	1.0869565217391304	1	0	0.6463659867854065	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001558	Chromosome_1A	547	1	23	40.95063985374772	1.0080929487179486	2.7457627118644066	22	0	2.7457627118644066	22	0	NA	NA	NA	2.318784099766173	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001554	Chromosome_1A	556	1	20	41.007194244604314	0.8622828784119106	5.145046524356869	20	0	5.145046524356869	20	0	NA	NA	NA	0.5420054200542005	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001553	Chromosome_1A	926	2	24	37.149028077753776	0.7548913043478261	0.5089058524173028	24	0	0.5698005698005698	22	0	0	2	0	0.49338416685355463	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001550	Chromosome_1A	867	2	13	32.52595155709343	0.5676369863013698	0.29282576866764276	13	0	0	6	0	0.43383947939262474	7	0	0.5747126436781609	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005703	Chromosome_1A	10357	7	281	37.20189243989572	0.7843272902692024	0.5871768159863624	246	0	0.4269854824935952	53	0	0.6328343677741268	193	0	3.4841075794621026	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005704	Chromosome_1A	14444	5	350	36.513431182497925	0.7270834037467361	1.0090923424607137	349	0	0.4355400696864111	54	0	1.0878010878010878	295	0	0.9523809523809523	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005705	Chromosome_1A	867	2	12	32.52595155709343	0.523972602739726	0.684931506849315	12	0	1.1811023622047243	6	0	0.42016806722689076	6	0	0.3033060357901122	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005706	Chromosome_1A	1571	5	31	34.56397199236155	0.6625806100514272	0.7391763463569165	31	0	0.8978675645342312	15	0	0.5982053838484547	16	0	0.6103286384976526	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001549	Chromosome_1A	7938	8	111	35.613504661123706	0.4410966968734888	0.9429361079499269	111	0	0.9329446064139941	30	0	0.9467989179440938	81	0	0.40937848902121327	66	0	unmethylated (<10%)	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN005707	Chromosome_1A	405	1	18	42.71604938271605	0.995085995085995	0.4878048780487805	18	0	0.4878048780487805	18	0	NA	NA	NA	1.3506994693680656	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005708	Chromosome_1A	171	1	7	48.538011695906434	0.7254545454545455	0	7	0	0	7	0	NA	NA	NA	0.6868131868131868	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005709	Chromosome_1A	1620	3	15	37.160493827160494	0.27038454691116254	88.15551537070525	15	1	87.38738738738739	3	1	88.24120603015075	12	1	77.4885145482389	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005710	Chromosome_1A	246	1	8	45.52845528455285	0.6348387096774194	0.35587188612099646	8	0	0.35587188612099646	8	0	NA	NA	NA	0.4432624113475177	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005711	Chromosome_1A	2684	3	82	36.69895678092399	0.9106361146280711	1.829268292682927	82	0	0.847457627118644	26	0	2.108433734939759	56	0	0.3415559772296015	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005712	Chromosome_1A	363	1	14	55.37190082644628	0.5349473684210526	1.4705882352941178	14	0	1.4705882352941178	14	0	NA	NA	NA	2.4644220756681707	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005713	Chromosome_1A	222	1	8	43.24324324324324	0.7721739130434783	0.398406374501992	8	0	0.398406374501992	8	0	NA	NA	NA	0.8312958435207825	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005714	Chromosome_1A	2361	2	52	33.460398136382885	0.7876007980446623	0.639599555061179	51	0	0.297029702970297	13	0	0.7733952049497294	38	0	0.2530044275774826	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005715	Chromosome_1A	2883	4	48	34.61671869580298	0.5562594462488343	0.5526831877339989	30	0	0.6127450980392157	9	0	0.5424577508867098	21	0	0.5257009345794392	96	0	unmethylated (<10%)	Q9D305	THAP domain-containing protein 2	NA	hit, no GO BP
GN005716	Chromosome_1A	231	1	13	41.55844155844156	1.3084967320261438	0.5631536604987932	7	0	0.5631536604987932	7	0	NA	NA	NA	9.272816007808688	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001540	Chromosome_1A	416	2	18	48.31730769230769	0.8062015503875969	1.1724137931034482	18	0	1.0768126346015794	17	0	3.508771929824561	1	0	6.409841372612496	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005717	Chromosome_1A	258	1	12	53.87596899224806	0.6843501326259946	1.2517385257301807	12	0	1.2517385257301807	12	0	NA	NA	NA	1.2331316891577477	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001541	Chromosome_1A	394	2	15	46.7005076142132	0.7448015122873346	0	15	0	0	15	0	NA	NA	NA	0.7023411371237458	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005718	Chromosome_1A	2294	2	32	35.00435919790758	0.4554637281910009	4.166666666666667	32	0	2.8694404591104736	9	0	4.816678648454349	23	0	0.6914893617021277	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005719	Chromosome_1A	321	1	4	41.12149532710281	0.29483352468427093	3.5294117647058822	4	0	3.5294117647058822	4	0	NA	NA	NA	6.291192330736968	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005720	Chromosome_1A	273	1	13	54.21245421245421	0.6842105263157895	1.1342155009451795	13	0	1.1342155009451795	13	0	NA	NA	NA	0.8665511265164645	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005721	Chromosome_1A	1837	2	9	35.819270549809474	0.1631245560028416	0.9049773755656109	9	0	0.6993006993006993	7	0	1.2820512820512822	2	0	1.2173012173012172	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005722	Chromosome_1A	174	1	2	48.85057471264368	0.23770491803278687	1.694915254237288	2	0	1.694915254237288	2	0	NA	NA	NA	0.673778775968557	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005723	Chromosome_1A	342	1	13	48.83040935672515	0.6428571428571429	0.6507592190889371	13	0	0.6507592190889371	13	0	NA	NA	NA	1.4367816091954022	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005724	Chromosome_1A	207	1	3	40.09661835748792	0.3631578947368421	0	3	0	0	3	0	NA	NA	NA	0.8879781420765027	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005725	Chromosome_1A	3195	4	43	33.14553990610329	0.4903314917127072	8.37920489296636	28	0	9.006928406466512	17	0	7.672301690507152	11	0	0.4092071611253197	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005726	Chromosome_1A	264	1	4	39.015151515151516	0.40274599542334094	0.24691358024691357	4	0	0.24691358024691357	4	0	NA	NA	NA	3.2839665164198326	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001534	Chromosome_1A	4310	5	42	33.52668213457076	0.347714175950826	4.992279979413278	40	0	6.299212598425197	17	0	4.529616724738676	23	0	0.45112781954887216	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005728	Chromosome_1A	10511	16	317	39.16849015317287	0.7884743624147098	1.171875	317	0	1.1414503133393017	137	0	1.189846641988366	180	0	1.4705882352941178	48	0	unmethylated (<10%)	Q5F364	Multidrug resistance-associated protein 1 (EC 7.6.2.2) (ATP-binding cassette sub-family C member 1) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter)	cyclic nucleotide transport [GO:0070729]; glutathione transmembrane transport [GO:0034775]; xenobiotic transport [GO:0042908]	hit with GO BP
GN005729	Chromosome_1A	520	2	17	43.65384615384615	0.6862288464524142	0.6437768240343348	17	0	0.6437768240343348	17	0	NA	NA	NA	0.37174721189591076	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001527	Chromosome_1A	834	2	8	34.172661870503596	0.3307227124021017	2.1459227467811157	6	0	2.1459227467811157	6	0	NA	NA	NA	0.8731808731808732	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001528	Chromosome_1A	3612	3	52	34.21926910299003	0.49272419627749575	88.75795427763374	51	0.8627450980392157	81.15501519756839	7	0.8571428571428571	89.39703628002044	44	0.8636363636363636	41.1764705882353	52	0.4230769230769231	methylated (>=50%)	Q24JY1	Large ribosomal subunit protein uL23 (60S ribosomal protein L23a)	translation [GO:0006412]	hit with GO BP
GN005731	Chromosome_1A	1867	2	33	35.08302088912694	0.5744936779679982	90.94567404426559	33	1	92.3076923076923	2	1	90.8939014202172	31	1	81.07874242861263	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005732	Chromosome_1A	1293	3	15	36.040216550657384	0.35778851829988195	80.54054054054055	15	0.9333333333333333	80.78078078078079	7	0.8571428571428571	80.4054054054054	8	1	74.81203007518798	19	0.8421052631578947	methylated (>=50%)	O95755	Ras-related protein Rab-36 (EC 3.6.5.2)	NA	hit, no GO BP
GN005733	Chromosome_1A	1539	3	15	34.24301494476933	0.3516374714394516	73.90243902439025	15	0.8	88.06451612903226	6	1	65.29411764705883	9	0.6666666666666666	55.40657439446367	34	0.7058823529411765	methylated (>=50%)	Q6DKJ4	Nucleoredoxin (EC 1.8.1.8)	circulatory system development [GO:0072359]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of Wnt signaling pathway [GO:0030178]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN005734	Chromosome_1A	342	1	19	48.24561403508772	0.9809782608695652	1.050420168067227	19	0	1.050420168067227	19	0	NA	NA	NA	0.4690831556503198	50	0	unmethylated (<10%)	Q6DKJ4	Nucleoredoxin (EC 1.8.1.8)	circulatory system development [GO:0072359]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of Wnt signaling pathway [GO:0030178]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN005735	Chromosome_1A	1573	2	35	34.13858868404323	0.7638041065482797	0.6750241080038573	35	0	1.4705882352941178	16	0	0.39215686274509803	19	0	0.7838745800671892	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005736	Chromosome_1A	408	1	11	37.254901960784316	0.7906976744186046	0.6861063464837049	11	0	0.6861063464837049	11	0	NA	NA	NA	0.9230769230769231	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005737	Chromosome_1A	177	1	2	40.112994350282484	0.28365384615384615	2	2	0	2	2	0	NA	NA	NA	2.068680182043856	78	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005738	Chromosome_1A	228	1	6	46.92982456140351	0.6047745358090185	0.4366812227074236	5	0	0.4366812227074236	5	0	NA	NA	NA	2.915821501014199	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005739	Chromosome_1A	168	1	3	49.404761904761905	0.3054545454545455	0	1	0	0	1	0	NA	NA	NA	1.1645962732919255	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005740	Chromosome_1A	1230	1	35	39.26829268292683	0.7383966244725738	0.5305039787798409	35	0	0.5305039787798409	35	0	NA	NA	NA	0.5893909626719057	58	0	unmethylated (<10%)	Q20929	G protein-coupled receptor dmsr-1 (Dromyosuppressin receptor related 1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of cellular response to heat [GO:1900034]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]	hit with GO BP
GN005741	Chromosome_1A	309	1	11	40.1294498381877	1.1545516304347827	0.5793742757821553	11	0	0.5793742757821553	11	0	NA	NA	NA	0.3768844221105528	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005742	Chromosome_1A	5827	4	100	35.81602883130256	0.535132107008054	2.483343428225318	100	0.01	1.2096774193548387	22	0	2.70848182466144	78	0.01282051282051282	0.7915567282321899	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005743	Chromosome_1A	1358	3	45	35.49337260677467	1.0698529411764706	0.7936507936507936	45	0	0.5586592178770949	17	0	0.8808290155440415	28	0	0.4316546762589928	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005744	Chromosome_1A	2107	3	43	36.117702895111535	0.6266929515113786	0.5415162454873647	43	0	0.5617977528089888	16	0	0.5319148936170213	27	0	0.6278538812785388	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005745	Chromosome_1A	17792	19	232	35.08318345323741	0.4242182384663395	86.87596806862862	231	0.9523809523809523	83.63880196691998	43	0.9534883720930233	87.37370265997663	188	0.9521276595744681	1.2595119391235896	51	0	methylated (>=50%)	Q9DBM1	G patch domain-containing protein 1	mRNA processing [GO:0006397]	hit with GO BP
GN001523	Chromosome_1A	790	2	9	36.835443037974684	0.33699876765570197	71.1864406779661	9	1	77.72020725388602	5	1	67.45562130177515	4	1	53.24232081911263	6	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005746	Chromosome_1A	8697	8	111	36.989766586179144	0.3731709014159641	81.98390540318607	111	0.9279279279279279	81.07177974434612	51	0.8823529411764706	82.44143033292232	60	0.9666666666666667	76.80798004987531	22	0.9545454545454546	methylated (>=50%)	A1L1R6	Zinc finger protein 423	negative regulation of DNA-templated transcription [GO:0045892]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN001522	Chromosome_1A	1197	1	18	36.00668337510443	0.46485436893203885	0.43478260869565216	18	0	0.43478260869565216	18	0	NA	NA	NA	0.3849114703618168	59	0	unmethylated (<10%)	Q9Y2C9	Toll-like receptor 6 (CD antigen CD286)	activation of NF-kappaB-inducing kinase activity [GO:0007250]; antibacterial innate immune response [GO:0140367]; cellular response to amyloid-beta [GO:1904646]; cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; defense response to bacterium [GO:0042742]; detection of diacyl bacterial lipopeptide [GO:0042496]; immune response [GO:0006955]; inflammatory response [GO:0006954]; innate immune response [GO:0045087]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide metabolic process [GO:0046209]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of macrophage activation [GO:0043032]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; signal transduction [GO:0007165]; toll-like receptor signaling pathway [GO:0002224]; toll-like receptor TLR6:TLR2 signaling pathway [GO:0038124]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]	hit with GO BP
GN005748	Chromosome_1A	2370	6	42	33.924050632911396	0.6181533646322379	0.6734006734006734	42	0	0.2656042496679947	16	0	0.9049773755656109	26	0	0.6377042646472698	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005749	Chromosome_1A	2559	4	47	35.44353262993357	0.58558352402746	0.37174721189591076	46	0	0.21929824561403508	10	0	0.41273584905660377	36	0	0.78031212484994	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005750	Chromosome_1A	216	1	6	43.05555555555556	0.638423645320197	0.9090909090909091	6	0	0.9090909090909091	6	0	NA	NA	NA	0.7845503922751962	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012361	Chromosome_1A	921	1	24	43.648208469055376	0.5550282485875706	37.01889433170049	24	0.3333333333333333	37.01889433170049	24	0.3333333333333333	NA	NA	NA	32.993095166616634	41	0.2682926829268293	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005751	Chromosome_1A	3108	5	42	33.94465894465895	0.46947627371010553	0.6819288845591817	42	0	0.29069767441860467	31	0	1.4771048744460857	11	0	7.68321513002364	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005752	Chromosome_1A	307	2	4	37.785016286644954	0.37212121212121213	0	4	0	0	4	0	NA	NA	NA	16.91931540342298	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005753	Chromosome_1A	381	1	13	43.83202099737533	0.7178260869565217	0.60790273556231	13	0	0.60790273556231	13	0	NA	NA	NA	0.9196084247997627	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001492	Chromosome_1A	1121	2	27	33.184656556645855	0.8813919627256843	0.6405124099279423	26	0	0.7220216606498195	14	0	0.5755395683453237	12	0	0.6089309878213802	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001493	Chromosome_1A	210	1	8	46.666666666666664	0.7301173402868318	1.3157894736842106	8	0	1.3157894736842106	8	0	NA	NA	NA	0.800711743772242	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001494	Chromosome_1A	19493	10	332	34.514954086082184	0.5761616666648861	88.3395176252319	307	0.9446254071661238	75.75757575757575	27	0.8518518518518519	89.1600790513834	280	0.9535714285714286	0.6457564575645757	55	0	methylated (>=50%)	Q86U38	Nucleolar protein 9	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000480]; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000472]; ribosomal small subunit export from nucleus [GO:0000056]	hit with GO BP
GN005755	Chromosome_1A	2842	3	73	38.59957776213934	0.6928327645051194	0.64	73	0	0.42887776983559683	33	0	0.8111239860950173	40	0	0.3840614498319731	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005756	Chromosome_1A	234	1	9	39.743589743589745	0.975	1.0101010101010102	9	0	1.0101010101010102	9	0	NA	NA	NA	0.7103825136612022	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005757	Chromosome_1A	681	1	22	40.23494860499266	0.8009623095429029	41.80672268907563	22	0.22727272727272727	41.80672268907563	22	0.22727272727272727	NA	NA	NA	73.18017552916882	60	0.6333333333333333	sparse (10-50%)	Q8L397	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN005758	Chromosome_1A	20126	16	300	34.567226473218724	0.4989970141832905	83.29420429959029	299	0.9933110367892977	94.96143958868895	41	1	82.146829810901	258	0.9922480620155039	90.22304832713755	33	0.9696969696969697	methylated (>=50%)	Q9H0H0	Integrator complex subunit 2 (Int2)	regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]; snRNA processing [GO:0016180]	hit with GO BP
GN005759	Chromosome_1A	291	1	11	40.893470790378004	0.9532459797498511	0.20449897750511248	11	0	0.20449897750511248	11	0	NA	NA	NA	45.136298421807744	56	0.48214285714285715	unmethylated (<10%)	Q9H0H0	Integrator complex subunit 2 (Int2)	regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]; snRNA processing [GO:0016180]	hit with GO BP
GN005760	Chromosome_1A	968	2	23	38.53305785123967	0.6408750719631549	0.34207525655644244	23	0	0.34207525655644244	23	0	NA	NA	NA	0.8786610878661087	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005761	Chromosome_1A	869	2	23	39.01035673187572	0.6958292716891797	0.7486631016042781	23	0	0.7486631016042781	23	0	NA	NA	NA	0.6453926138400861	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005762	Chromosome_1A	1718	2	33	42.0256111757858	0.43869939333911107	2.968960863697706	33	0	3.0619345859429368	32	0	0	1	0	1.443001443001443	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005763	Chromosome_1A	7937	3	198	38.490613581957916	0.6742130950051997	29.423923788981757	197	0.06091370558375635	28.78625134264232	187	0.06417112299465241	36.794582392776526	10	0	32.57546060368483	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005764	Chromosome_1A	756	1	36	46.42857142857143	0.8983957219251337	NA	0	NA	NA	NA	NA	NA	NA	NA	79.75921745673439	37	0.972972972972973	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN005765	Chromosome_1A	892	2	20	41.92825112107624	0.5709165386584741	0.6684491978609626	20	0	0.9259259259259259	15	0	0	5	0	0.6682867557715675	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005766	Chromosome_1A	477	1	8	44.44444444444444	0.33962264150943394	40.78947368421053	8	0.5	40.78947368421053	8	0.5	NA	NA	NA	37.878787878787875	4	0.25	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005767	Chromosome_1A	619	2	27	41.35702746365105	1.0216394645149458	0.4633920296570899	27	0	0.49019607843137253	26	0	0	1	0	0.4435245416913069	47	0	unmethylated (<10%)	Q8AXX2	T-box transcription factor TBX1 (T-box protein 1)	cardiac muscle cell differentiation [GO:0055007]; cartilage morphogenesis [GO:0060536]; cell fate specification [GO:0001708]; chordate pharyngeal muscle development [GO:0043282]; ear development [GO:0043583]; ear morphogenesis [GO:0042471]; embryonic heart tube morphogenesis [GO:0003143]; embryonic viscerocranium morphogenesis [GO:0048703]; heart development [GO:0007507]; heart looping [GO:0001947]; neural crest cell development [GO:0014032]; neural crest cell migration [GO:0001755]; parathyroid gland development [GO:0060017]; pharyngeal system development [GO:0060037]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of secondary heart field cardioblast proliferation [GO:0072513]; regulation of transcription by RNA polymerase II [GO:0006357]; semicircular canal morphogenesis [GO:0048752]; soft palate development [GO:0060023]; thymus development [GO:0048538]	hit with GO BP
GN005768	Chromosome_1A	1431	3	42	36.687631027253666	0.8770685579196218	0.49371633752244165	41	0	0.6430868167202572	18	0	0.43586550435865506	23	0	0.553213909378293	59	0	unmethylated (<10%)	O43435	T-box transcription factor TBX1 (T-box protein 1) (Testis-specific T-box protein)	angiogenesis [GO:0001525]; anterior/posterior pattern specification [GO:0009952]; aorta morphogenesis [GO:0035909]; artery morphogenesis [GO:0048844]; blood vessel development [GO:0001568]; blood vessel morphogenesis [GO:0048514]; cell fate specification [GO:0001708]; cell population proliferation [GO:0008283]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to retinoic acid [GO:0071300]; cochlea morphogenesis [GO:0090103]; coronary artery morphogenesis [GO:0060982]; determination of left/right symmetry [GO:0007368]; ear morphogenesis [GO:0042471]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic viscerocranium morphogenesis [GO:0048703]; enamel mineralization [GO:0070166]; epithelial cell differentiation [GO:0030855]; face morphogenesis [GO:0060325]; heart development [GO:0007507]; heart morphogenesis [GO:0003007]; inner ear morphogenesis [GO:0042472]; lymph vessel development [GO:0001945]; mesenchymal cell apoptotic process [GO:0097152]; mesoderm development [GO:0007498]; middle ear morphogenesis [GO:0042474]; muscle cell fate commitment [GO:0042693]; muscle organ development [GO:0007517]; muscle organ morphogenesis [GO:0048644]; muscle tissue morphogenesis [GO:0060415]; negative regulation of cell differentiation [GO:0045596]; negative regulation of mesenchymal cell apoptotic process [GO:2001054]; neural crest cell migration [GO:0001755]; odontogenesis of dentin-containing tooth [GO:0042475]; outer ear morphogenesis [GO:0042473]; outflow tract morphogenesis [GO:0003151]; outflow tract septum morphogenesis [GO:0003148]; parathyroid gland development [GO:0060017]; pattern specification process [GO:0007389]; pharyngeal system development [GO:0060037]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of mesenchymal cell proliferation [GO:0002053]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of tongue muscle cell differentiation [GO:2001037]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of animal organ morphogenesis [GO:2000027]; regulation of transcription by RNA polymerase II [GO:0006357]; retinoic acid receptor signaling pathway [GO:0048384]; semicircular canal morphogenesis [GO:0048752]; sensory perception of sound [GO:0007605]; social behavior [GO:0035176]; soft palate development [GO:0060023]; somatic stem cell population maintenance [GO:0035019]; thymus development [GO:0048538]; thyroid gland development [GO:0030878]; tongue morphogenesis [GO:0043587]; vagus nerve morphogenesis [GO:0021644]	hit with GO BP
GN005769	Chromosome_1A	595	2	26	40.50420168067227	1.0789510391965407	0.596252129471891	26	0	0.5469462169553327	25	0	1.2987012987012987	1	0	0.41841004184100417	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005770	Chromosome_1A	20215	13	284	36.725204056393764	0.42003489157747753	88.55333658061373	284	0.9401408450704225	89.51104100946372	49	0.9387755102040817	88.34811998310097	235	0.9404255319148936	53.041825095057035	40	0.65	methylated (>=50%)	P22059	Oxysterol-binding protein 1	bile acid biosynthetic process [GO:0006699]; ceramide transport [GO:0035627]; intracellular cholesterol transport [GO:0032367]; lipid transport [GO:0006869]; phospholipid transport [GO:0015914]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of secretory granule organization [GO:1904411]; sphingomyelin biosynthetic process [GO:0006686]; sterol transport [GO:0015918]	hit with GO BP
GN001502	Chromosome_1A	1431	2	16	35.70929419986024	0.35171587452763525	88.29787234042553	16	1	81.30841121495327	8	1	94.140625	8	1	76.93229478729778	33	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005771	Chromosome_1A	1077	1	32	39.83286908077994	0.7492499673898865	89.2904073587385	32	0.96875	89.2904073587385	32	0.96875	NA	NA	NA	63.29113924050633	17	0.5882352941176471	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005772	Chromosome_1A	198	1	7	44.94949494949495	0.7071428571428572	0.9302325581395349	7	0	0.9302325581395349	7	0	NA	NA	NA	0.5975395430579965	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005773	Chromosome_1A	2098	6	63	39.46615824594852	0.7830445214609437	1.24804992199688	62	0	1.452643811737362	44	0	0.830367734282325	18	0	0.954653937947494	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005774	Chromosome_1A	1064	4	32	39.755639097744364	0.766398055192905	3.2203389830508473	32	0	3.192584963954686	27	0	3.349282296650718	5	0	1.2393162393162394	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001505	Chromosome_1A	1032	3	22	32.848837209302324	0.7997745526278709	2.6580459770114944	22	0	4.8034934497816595	9	0	1.6059957173447537	13	0	1.047590541753966	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001506	Chromosome_1A	40766	17	472	35.54923220330668	0.3686683609864992	60.63658928310702	417	0.6786570743405276	90.41016753321779	81	0.9629629629629629	54.60345332162716	336	0.6101190476190477	1.3103448275862069	28	0	methylated (>=50%)	Q6P9S0	Protein MTSS 2 (MTSS1-like protein)	activation of GTPase activity [GO:0090630]; cellular response to platelet-derived growth factor stimulus [GO:0036120]; lamellipodium organization [GO:0097581]; membrane organization [GO:0061024]; plasma membrane organization [GO:0007009]	hit with GO BP
GN005776	Chromosome_1A	4494	1	162	43.90298175344904	0.7482302158273382	2.105652013298855	162	0	2.105652013298855	162	0	NA	NA	NA	0.882800608828006	75	0	unmethylated (<10%)	Q9NTZ6	RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW domain anchor protein in the nucleus) (SWAN)	regulation of RNA splicing [GO:0043484]	hit with GO BP
GN001508	Chromosome_1A	6708	4	97	32.901013714967206	0.535698055048772	71.13315635042616	97	0.7422680412371134	43.91608391608391	12	0.3333333333333333	74.15398944427197	85	0.8	0.7833920877399139	59	0	methylated (>=50%)	Q8BR76	Meckelin (Meckel syndrome type 3 protein homolog) (Transmembrane protein 67)	branching morphogenesis of an epithelial tube [GO:0048754]; cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; epithelial tube branching involved in lung morphogenesis [GO:0060441]; ERAD pathway [GO:0036503]; head development [GO:0060322]; heart development [GO:0007507]; kidney development [GO:0001822]; negative regulation of centrosome duplication [GO:0010826]; non-canonical Wnt signaling pathway [GO:0035567]; photoreceptor cell outer segment organization [GO:0035845]; positive regulation of ERAD pathway [GO:1904294]; positive regulation of non-motile cilium assembly [GO:1902857]	hit with GO BP
GN005777	Chromosome_1A	4297	5	57	41.7733302303933	0.3136038534520508	81.21739130434783	19	0.8947368421052632	90.38461538461539	11	1	76.02179836512262	8	0.75	85.68486096807415	51	0.9803921568627451	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001510	Chromosome_1A	3483	4	68	34.65403387884008	0.6503451570917838	85.96231208977345	68	0.9705882352941176	93.84858044164038	12	1	84.7395451210565	56	0.9642857142857143	76.1786600496278	11	0.8181818181818182	methylated (>=50%)	P0C152	Meckelin (Meckel syndrome type 3 protein homolog) (Transmembrane protein 67)	branching morphogenesis of an epithelial tube [GO:0048754]; cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; epithelial tube branching involved in lung morphogenesis [GO:0060441]; ERAD pathway [GO:0036503]; head development [GO:0060322]; heart development [GO:0007507]; kidney development [GO:0001822]; negative regulation of centrosome duplication [GO:0010826]; non-canonical Wnt signaling pathway [GO:0035567]; photoreceptor cell outer segment organization [GO:0035845]; positive regulation of ERAD pathway [GO:1904294]; positive regulation of non-motile cilium assembly [GO:1902857]	hit with GO BP
GN005778	Chromosome_1A	15319	11	171	33.22671192636595	0.4067764158256436	74.81926661440642	171	0.8771929824561403	86.74096848578017	52	1	71.32559972969929	119	0.8235294117647058	74.8133061778683	30	0.9	methylated (>=50%)	P0C152	Meckelin (Meckel syndrome type 3 protein homolog) (Transmembrane protein 67)	branching morphogenesis of an epithelial tube [GO:0048754]; cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; epithelial tube branching involved in lung morphogenesis [GO:0060441]; ERAD pathway [GO:0036503]; head development [GO:0060322]; heart development [GO:0007507]; kidney development [GO:0001822]; negative regulation of centrosome duplication [GO:0010826]; non-canonical Wnt signaling pathway [GO:0035567]; photoreceptor cell outer segment organization [GO:0035845]; positive regulation of ERAD pathway [GO:1904294]; positive regulation of non-motile cilium assembly [GO:1902857]	hit with GO BP
GN005779	Chromosome_1A	1902	1	72	45.00525762355415	0.7487574838021815	0.6046511627906976	72	0	0.6046511627906976	72	0	NA	NA	NA	0.547392682224143	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001514	Chromosome_1A	4769	7	158	36.73726148039421	0.9829975147905836	0.47508831770008525	158	0	0.37537537537537535	46	0	0.5229936880072137	112	0	0.830945558739255	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005780	Chromosome_1A	1629	1	69	39.28790669122161	1.113366218946868	0.7315700619020822	69	0	0.7315700619020822	69	0	NA	NA	NA	0.8860759493670886	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005781	Chromosome_1A	534	1	21	46.441947565543074	0.730078125	1.10062893081761	21	0	1.10062893081761	21	0	NA	NA	NA	0.8168822328114363	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005782	Chromosome_1A	549	1	26	44.080145719489984	0.9792138300061741	0.5328596802841918	26	0	0.5328596802841918	26	0	NA	NA	NA	1.0841507485802788	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005783	Chromosome_1A	5469	3	172	38.72737246297312	0.8387730153252708	0.6670533642691415	172	0	0.7784625364904314	84	0	0.5769735116706006	88	0	0.415564790328674	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005784	Chromosome_1A	3893	2	117	39.63524274338556	0.7655503116113027	0.5016302984700276	108	0	0.4168403501458941	66	0	0.6297229219143576	42	0	0.5259835893120135	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005785	Chromosome_1A	25640	11	446	35.17160686427457	0.5709247476744511	76.87047303038887	406	0.9039408866995073	83.91003460207612	16	0.9375	76.52502440888058	390	0.9025641025641026	31.093279839518555	26	0.4230769230769231	methylated (>=50%)	Q642J4	Protein IMPACT (Imprinted and ancient gene protein homolog)	cellular response to amino acid starvation [GO:0034198]; GCN2-mediated signaling [GO:0140469]; intracellular signal transduction [GO:0035556]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron projection extension [GO:1990138]; positive regulation of neuron differentiation [GO:0045666]; regulation of cytoplasmic translational initiation in response to stress [GO:1990611]; regulation of translational initiation [GO:0006446]	hit with GO BP
GN001487	Chromosome_1A	4390	5	77	39.63553530751708	0.4516485043477331	81.68456755228942	77	0.935064935064935	90.64430714916152	26	0.9615384615384616	77.46361746361747	51	0.9215686274509803	63.84933394579697	25	0.76	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001488	Chromosome_1A	473	2	12	41.014799154334035	0.6048593350383632	84.79138627187079	12	1	87.08661417322834	10	1	71.29629629629629	2	1	79.88980716253444	9	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001489	Chromosome_1A	2544	3	36	38.48270440251572	0.38334421618363557	74.78143913920646	36	0.9444444444444444	76.21832358674465	10	0.9	74.02464065708419	26	0.9615384615384616	82.1688500727802	20	0.95	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005787	Chromosome_1A	14399	15	188	34.53712063337732	0.43942631663358406	80.41108688881968	187	0.9037433155080213	75.51319648093842	10	0.8	80.68574247656636	177	0.9096045197740112	72.5085910652921	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005788	Chromosome_1A	9253	7	149	34.507727223603155	0.5433811172384655	66.5078933043005	149	0.7516778523489933	53.82331106161841	24	0.5833333333333334	69.35510748208632	125	0.784	0.42803638309256287	31	0	methylated (>=50%)	Q8C3X2	Coiled-coil domain-containing protein 90B, mitochondrial	NA	hit, no GO BP
GN005789	Chromosome_1A	588	2	9	42.006802721088434	0.36117936117936117	81.42589118198875	9	0.8888888888888888	78.82352941176471	6	0.8333333333333334	83.81294964028777	3	1	86.90582959641256	38	0.9736842105263158	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005790	Chromosome_1A	1221	1	15	40.62244062244062	0.30419545575338824	63.13725490196079	15	0.8	63.13725490196079	15	0.8	NA	NA	NA	68.30466830466831	14	0.7142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005791	Chromosome_1A	17160	5	184	34.95337995337995	0.35277397903091734	75.54415147761458	184	0.8532608695652174	77.83350050150452	19	0.8947368421052632	75.32265890344493	165	0.8484848484848485	36.66186012977649	53	0.39622641509433965	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005792	Chromosome_1A	4515	4	37	34.50719822812846	0.2778618666169896	85.37224092779648	37	0.972972972972973	86.26198083067092	5	0.8	85.2542372881356	32	1	41.693511274735386	28	0.5	methylated (>=50%)	B5FZ63	Transcription and mRNA export factor ENY2 (Enhancer of yellow 2 transcription factor homolog)	poly(A)+ mRNA export from nucleus [GO:0016973]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN005793	Chromosome_1A	27992	24	423	35.999571306087454	0.47266679020298946	84.19860298282046	420	0.9404761904761905	90.4887714663144	80	0.9875	82.89659572528825	340	0.9294117647058824	93.49333333333334	24	1	methylated (>=50%)	Q68FK8	ATP-dependent RNA helicase A protein (EC 3.6.4.13) (DEAH box protein 9) (Nuclear DNA helicase II) (NDH II)	alternative mRNA splicing, via spliceosome [GO:0000380]; chromatin organization [GO:0006325]; miRNA-mediated post-transcriptional gene silencing [GO:0035195]; positive regulation of cytoplasmic translation [GO:2000767]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA replication [GO:0045740]; positive regulation of fibroblast proliferation [GO:0048146]; positive regulation of RNA export from nucleus [GO:0046833]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cytoplasmic translation [GO:2000765]; regulation of mRNA processing [GO:0050684]; RISC complex assembly [GO:0070922]	hit with GO BP
GN005794	Chromosome_1A	3669	5	61	33.0335241210139	0.616316021369169	96.33636587164986	61	1	96.74457429048414	20	1	96.16591146741025	41	1	86.28434886499403	36	1	methylated (>=50%)	O70133	ATP-dependent RNA helicase A (EC 3.6.4.13) (DEAH box protein 9) (mHEL-5) (Nuclear DNA helicase II) (NDH II) (RNA helicase A) (RHA)	alternative mRNA splicing, via spliceosome [GO:0000380]; cellular response to exogenous dsRNA [GO:0071360]; cellular response to heat [GO:0034605]; chromatin organization [GO:0006325]; circadian rhythm [GO:0007623]; CRD-mediated mRNA stabilization [GO:0070934]; DNA-templated viral transcription [GO:0039695]; miRNA-mediated post-transcriptional gene silencing [GO:0035195]; negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900152]; positive regulation of cytoplasmic translation [GO:2000767]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA replication [GO:0045740]; positive regulation of fibroblast proliferation [GO:0048146]; positive regulation of inflammatory response [GO:0050729]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-18 production [GO:0032741]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of RNA export from nucleus [GO:0046833]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of viral transcription [GO:0050434]; protein localization to cytoplasmic stress granule [GO:1903608]; pyroptotic inflammatory response [GO:0070269]; regulation of cytoplasmic translation [GO:2000765]; regulation of defense response to virus by host [GO:0050691]; regulation of mRNA processing [GO:0050684]; regulation of transcription by RNA polymerase II [GO:0006357]; RISC complex assembly [GO:0070922]	hit with GO BP
GN005795	Chromosome_1A	14884	17	208	35.50120935232464	0.44422589361469184	85.32665053577601	195	0.9538461538461539	91.48225469728601	43	1	83.72016999019287	152	0.9407894736842105	93.95198522622346	29	1	methylated (>=50%)	Q5R4Q7	Leucine-zipper-like transcriptional regulator 1 (LZTR-1)	negative regulation of Ras protein signal transduction [GO:0046580]; protein ubiquitination [GO:0016567]	hit with GO BP
GN005796	Chromosome_1A	303	1	10	43.8943894389439	0.696551724137931	71.69811320754717	10	0.9	71.69811320754717	10	0.9	NA	NA	NA	61.956791656319844	72	0.8194444444444444	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001086	Chromosome_1A	775	2	18	41.806451612903224	0.5318743327741345	26.58276125095347	18	0.16666666666666666	26.58276125095347	18	0.16666666666666666	NA	NA	NA	3.792981212336051	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005797	Chromosome_1A	7594	6	81	36.16012641559126	0.3306211300309598	81.17023365403494	79	0.8481012658227848	81.69934640522875	18	0.8888888888888888	81.07670979667283	61	0.8360655737704918	88.9348500517063	32	1	methylated (>=50%)	Q924H5	DNA repair protein RAD51 homolog 3 (R51H3) (RAD51 homolog C) (RAD51-like protein 2)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; female meiosis sister chromatid cohesion [GO:0007066]; male meiosis I [GO:0007141]; meiotic DNA recombinase assembly [GO:0000707]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; reciprocal meiotic recombination [GO:0007131]; replication fork processing [GO:0031297]; spermatogenesis [GO:0007283]; supramolecular fiber organization [GO:0097435]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN005798	Chromosome_1A	3793	8	53	34.194568942789346	0.47801223154330497	86.13354873451804	53	0.9811320754716981	86.36709824828637	20	1	86.00583090379008	33	0.9696969696969697	85.86572438162544	25	1	methylated (>=50%)	Q6NZQ0	Cilia- and flagella-associated protein 119 (Coiled-coil domain-containing protein 189)	gene expression [GO:0010467]; single fertilization [GO:0007338]; sperm flagellum assembly [GO:0120316]	hit with GO BP
GN001486	Chromosome_1A	893	2	6	36.73012318029115	0.2056419113413932	82.53968253968254	6	1	81.33333333333333	4	1	84.31372549019608	2	1	92.98794104510942	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001480	Chromosome_1A	177	1	8	59.32203389830509	0.9042145593869731	97.36842105263158	8	1	97.36842105263158	8	1	NA	NA	NA	90.92674805771365	51	0.9803921568627451	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001479	Chromosome_1A	441	1	14	45.57823129251701	0.6112871287128713	0.5420054200542005	14	0	0.5420054200542005	14	0	NA	NA	NA	0.44275774826059455	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005800	Chromosome_1A	18361	25	454	36.45226294864114	0.7451657916637987	47.79589859518811	451	0.656319290465632	50.44326241134752	186	0.7365591397849462	46.27889255778511	265	0.6	0.6171183257311511	58	0	sparse (10-50%)	Q9Z0J4	Nitric oxide synthase 1 (EC 1.14.13.39) (Constitutive NOS) (NC-NOS) (NOS type I) (Neuronal NOS) (N-NOS) (nNOS) (Nitric oxide synthase, brain) (bNOS) (Peptidyl-cysteine S-nitrosylase NOS1)	behavioral response to cocaine [GO:0048148]; cellular response to epinephrine stimulus [GO:0071872]; cellular response to growth factor stimulus [GO:0071363]; cellular response to mechanical stimulus [GO:0071260]; establishment of protein localization [GO:0045184]; L-arginine catabolic process [GO:0006527]; multicellular organismal response to stress [GO:0033555]; negative regulation of apoptotic process [GO:0043066]; negative regulation of blood pressure [GO:0045776]; negative regulation of calcium ion transport [GO:0051926]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cytosolic calcium ion concentration [GO:0051481]; negative regulation of hepatic stellate cell contraction [GO:0061875]; negative regulation of hydrolase activity [GO:0051346]; negative regulation of insulin secretion [GO:0046676]; negative regulation of iron ion transmembrane transport [GO:0034760]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of potassium ion transport [GO:0043267]; negative regulation of serotonin uptake [GO:0051612]; negative regulation of vasoconstriction [GO:0045906]; nitric oxide biosynthetic process [GO:0006809]; nitric oxide-cGMP-mediated signaling [GO:0038060]; peptidyl-cysteine S-nitrosylation [GO:0018119]; positive regulation of adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071879]; positive regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0106071]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of sodium ion transmembrane transport [GO:1902307]; positive regulation of the force of heart contraction [GO:0098735]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of neurogenesis [GO:0050767]; regulation of postsynaptic membrane potential [GO:0060078]; regulation of sodium ion transport [GO:0002028]; response to estrogen [GO:0043627]; response to heat [GO:0009408]; response to hormone [GO:0009725]; response to hypoxia [GO:0001666]; response to lipopolysaccharide [GO:0032496]; response to peptide hormone [GO:0043434]; striated muscle contraction [GO:0006941]; synaptic signaling by nitric oxide [GO:0099163]; vasodilation [GO:0042311]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN005801	Chromosome_1A	318	1	13	42.45283018867924	0.9298245614035088	20.898100172711572	13	0	20.898100172711572	13	0	NA	NA	NA	10.773026315789474	42	0	sparse (10-50%)	Q28C22	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 (EC 1.14.11.-)	NA	hit, no GO BP
GN005802	Chromosome_1A	582	3	12	34.36426116838488	0.710405859017394	1.4942528735632183	12	0	1.0964912280701755	7	0	1.932367149758454	5	0	0.6314127861089187	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005803	Chromosome_1A	702	1	13	40.883190883190885	0.4588235294117647	0.7130124777183601	13	0	0.7130124777183601	13	0	NA	NA	NA	0.646551724137931	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005804	Chromosome_1A	706	3	7	33.42776203966006	0.3624495782911624	2.0134228187919465	7	0	2.803738317757009	5	0	0	2	0	6.574141709276844	45	0.044444444444444446	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001474	Chromosome_1A	762	1	24	40.28871391076115	0.7765605095541401	1.6910935738444195	24	0	1.6910935738444195	24	0	NA	NA	NA	1.0596026490066226	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005805	Chromosome_1A	762	1	24	40.15748031496063	0.7813715018158514	0.340522133938706	24	0	0.340522133938706	24	0	NA	NA	NA	0.7352941176470589	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005806	Chromosome_1A	186	1	5	54.30107526881721	0.3927364864864865	0.9389671361502347	5	0	0.9389671361502347	5	0	NA	NA	NA	0.48894557823129253	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001472	Chromosome_1A	197	1	3	48.73096446700507	0.28857421875	0	3	0	0	3	0	NA	NA	NA	4.708614864864865	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005807	Chromosome_1A	5997	2	209	38.202434550608636	0.9553657588438408	3.8330757341576507	193	0	0.9216589861751152	6	0	3.899662731871838	187	0	0.5466778805719091	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005808	Chromosome_1A	527	2	9	44.59203036053131	0.4041411042944785	2.1341463414634148	9	0	1.7167381974248928	6	0	3.1578947368421053	3	0	0.5257623554153522	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005809	Chromosome_1A	216	1	8	40.74074074074074	0.9520661157024793	0.7285974499089253	8	0	0.7285974499089253	8	0	NA	NA	NA	1.7795353435491843	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001469	Chromosome_1A	1066	1	23	38.930581613508444	0.5745149498547193	13.697788697788697	23	0	13.697788697788697	23	0	NA	NA	NA	0.4971002485501243	63	0	sparse (10-50%)	Q95SX7	Probable RNA-directed DNA polymerase from transposon BS (EC 2.7.7.49) (Reverse transcriptase)	DNA transposition [GO:0006313]	hit with GO BP
GN005810	Chromosome_1A	14456	10	193	35.27946873270614	0.4299567085690897	66.16564735150824	192	0.84375	87.8875968992248	34	1	63.563551944283226	158	0.810126582278481	3.0740276035131746	40	0.025	methylated (>=50%)	Q5F464	Lipoma-preferred partner homolog	cell-cell adhesion [GO:0098609]	hit with GO BP
GN001466	Chromosome_1A	68794	32	908	35.8941186731401	0.41203364767042666	73.5183056969299	571	0.7933450087565674	82.29885057471265	90	0.9111111111111111	72.05516184638958	481	0.7713097713097713	40.4639175257732	6	0.5	methylated (>=50%)	Q95JN5	Polyamine-transporting ATPase 13A3 (ATPase family homolog up-regulated in senescence cells 1) (Putrescine transporting ATPase) (EC 7.6.2.16)	intracellular calcium ion homeostasis [GO:0006874]	hit with GO BP
GN005811	Chromosome_1A	4086	4	55	36.88203622124327	0.3982173866817876	92.13483146067416	55	0.9818181818181818	88.77338877338877	8	1	92.79315960912052	47	0.9787234042553191	94.3012211668928	42	1	methylated (>=50%)	P10160	Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) (eIF-5A1) (Eukaryotic initiation factor 5A isoform 1) (eIF-5A) (eIF-4D)	positive regulation of translation [GO:0045727]; translational elongation [GO:0006414]	hit with GO BP
GN005812	Chromosome_1A	889	2	24	43.41957255343082	0.5746606334841629	96.06396063960639	24	1	96.06396063960639	24	1	NA	NA	NA	91.56316916488223	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005813	Chromosome_1A	14455	12	198	33.241093047388446	0.5000693645335121	89.85291932848017	197	0.9593908629441624	89.40677966101696	31	0.9354838709677419	89.92569552445136	166	0.963855421686747	8.912280701754385	31	0	methylated (>=50%)	P48612	Protein pelota	compound eye morphogenesis [GO:0001745]; female germ-line stem cell asymmetric division [GO:0048132]; germ-line stem cell population maintenance [GO:0030718]; male germ-line stem cell population maintenance [GO:0036098]; meiotic cell cycle [GO:0051321]; meiotic nuclear membrane disassembly [GO:0051078]; meiotic spindle organization [GO:0000212]; nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; post-transcriptional gene silencing [GO:0016441]; rescue of stalled cytosolic ribosome [GO:0072344]; RNA surveillance [GO:0071025]; sperm individualization [GO:0007291]; spermatocyte division [GO:0048137]	hit with GO BP
GN005814	Chromosome_1A	725	2	9	40.96551724137931	0.3000551825623103	0.3952569169960474	9	0	0	4	0	0.6622516556291391	5	0	14.631956912028725	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005815	Chromosome_1A	294	1	7	45.91836734693877	0.4537037037037037	13.91304347826087	6	0	13.91304347826087	6	0	NA	NA	NA	17.530864197530864	20	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005816	Chromosome_1A	9713	5	207	35.08699680840111	0.6941306239125031	0.8525937339496662	206	0	0.32175032175032175	41	0	0.9534286762009534	165	0	1.4504431909750202	46	0	unmethylated (<10%)	Q9GZV8	PR domain zinc finger protein 14 (EC 2.1.1.-) (PR domain-containing protein 14)	positive regulation of flagellated sperm motility [GO:1902093]; positive regulation of stem cell population maintenance [GO:1902459]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005817	Chromosome_1A	28148	18	409	36.240585476765666	0.44421085952758554	80.78633007306607	388	0.904639175257732	90.06687647521636	123	0.967479674796748	78.51609488524275	265	0.8754716981132076	39.97262149212868	47	0.46808510638297873	methylated (>=50%)	A6H5Y1	M-phase phosphoprotein 9	negative regulation of cilium assembly [GO:1902018]	hit with GO BP
GN001461	Chromosome_1A	2063	2	16	34.80368395540475	0.2579132840030942	75.02374169040836	16	0.8125	79.18552036199095	4	1	73.91826923076923	12	0.75	82.3529411764706	31	0.8709677419354839	methylated (>=50%)	Q80VP5	Mitochondrial translation release factor in rescue	rescue of stalled cytosolic ribosome [GO:0072344]; rescue of stalled mitochondrial ribosome [GO:7770016]	hit with GO BP
GN005819	Chromosome_1A	5032	5	73	35.313990461049286	0.46549727166510796	89.1956211327939	73	0.9726027397260274	91.91176470588235	11	1	88.67120954003407	62	0.967741935483871	72.75449101796407	24	0.625	methylated (>=50%)	P13420	Nucleoside diphosphate-linked moiety X motif 6 (Nudix motif 6) (EC 3.6.1.-) (Protein GFG)	NA	hit, no GO BP
GN005820	Chromosome_1A	504	1	14	56.94444444444444	0.3448680351906158	88.57142857142857	5	0.8	88.57142857142857	5	0.8	NA	NA	NA	88.9944576405384	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001459	Chromosome_1A	252	1	9	59.92063492063492	0.39831401475237094	81.81818181818181	3	0.6666666666666666	81.81818181818181	3	0.6666666666666666	NA	NA	NA	76.37564196625091	24	0.9166666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN001458	Chromosome_1A	1711	4	49	39.21683226183519	0.7468687084647317	35.62599970917551	48	0.10416666666666667	31.082474226804123	32	0.09375	41.50817484150817	16	0.125	0.9517558254020347	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001457	Chromosome_1A	2773	7	34	35.62928236566895	0.3867503486750349	73.73134328358209	34	0.7941176470588235	76.63366336633663	19	0.8421052631578947	70.8	15	0.7333333333333333	1.0569583088667058	41	0	methylated (>=50%)	Q4G0P3	Axonemal central pair apparatus protein HYDIN (Hydrocephalus-inducing protein homolog)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]	hit with GO BP
GN001456	Chromosome_1A	14211	28	186	37.81577651115333	0.36983636229061173	78.1100611450806	186	0.9032258064516129	81.48485954031375	128	0.921875	72.84372331340734	58	0.8620689655172413	77.72575250836121	25	0.92	methylated (>=50%)	Q4G0P3	Axonemal central pair apparatus protein HYDIN (Hydrocephalus-inducing protein homolog)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]	hit with GO BP
GN001455	Chromosome_1A	13033	19	194	36.44594490907696	0.45113582328564866	79.52252599152868	193	0.9481865284974094	83.72873232686317	86	0.9883720930232558	77.53064003631411	107	0.9158878504672897	73.52415026833631	10	0.9	methylated (>=50%)	Q4G0P3	Axonemal central pair apparatus protein HYDIN (Hydrocephalus-inducing protein homolog)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]	hit with GO BP
GN001454	Chromosome_1A	186	1	7	49.46236559139785	0.6226685796269728	91.50485436893204	7	1	91.50485436893204	7	1	NA	NA	NA	83.72881355932203	46	0.9782608695652174	methylated (>=50%)	Q4G0P3	Axonemal central pair apparatus protein HYDIN (Hydrocephalus-inducing protein homolog)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]	hit with GO BP
GN001453	Chromosome_1A	13412	26	190	38.413361169102295	0.384401471365765	79.1293977340489	190	0.9105263157894737	78.78271972760162	110	0.9090909090909091	79.43315308595935	80	0.9125	75.23255813953489	26	0.8461538461538461	methylated (>=50%)	Q4G0P3	Axonemal central pair apparatus protein HYDIN (Hydrocephalus-inducing protein homolog)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]	hit with GO BP
GN001452	Chromosome_1A	11819	7	148	35.984431847025974	0.38837614944519344	75.67519858781995	135	0.8888888888888888	83.06878306878306	11	0.9090909090909091	75.2857010127288	124	0.8870967741935484	0.3582517315500358	63	0	methylated (>=50%)	Q6TMK8	PRELI domain containing protein 3B (BCR/ABL-regulated protein) (Protein slowmo homolog 2)	intermembrane phospholipid transfer [GO:0120010]; mitochondrial membrane organization [GO:0007006]	hit with GO BP
GN001451	Chromosome_1A	270	1	10	40.370370370370374	0.9316770186335404	1.21765601217656	10	0	1.21765601217656	10	0	NA	NA	NA	0.4025764895330113	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001450	Chromosome_1A	14713	3	221	38.55773805478149	0.4042497298431673	90.20048248897763	209	0.9712918660287081	95.4152574220218	46	1	88.71794871794872	163	0.9631901840490797	91.93037974683544	24	0.9583333333333334	methylated (>=50%)	Q21502	MOG interacting and ectopic P-granules protein 1 (Nuclear zinc finger protein)	gonad development [GO:0008406]; nematode larval development [GO:0002119]; oocyte development [GO:0048599]; positive regulation of gene expression [GO:0010628]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]; vulval development [GO:0040025]	hit with GO BP
GN005825	Chromosome_1A	5770	3	63	32.91161178509532	0.4032109572752341	61.77007299270073	62	0.7741935483870968	80.40152963671129	15	0.8666666666666667	55.93169562612343	47	0.7446808510638298	47.42335290280496	25	0.36	methylated (>=50%)	Q9DAR0	Cilia- and flagella-associated protein 90 (Y regulated sperm protein)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN005826	Chromosome_1A	13226	9	149	34.81022228942991	0.3726417199343165	86.93831699346406	147	0.9659863945578231	94.21686746987952	12	1	86.26422673510378	135	0.9629629629629629	91.75965665236052	18	1	methylated (>=50%)	Q8BVR6	RING finger and SPRY domain-containing protein 1	NA	hit, no GO BP
GN005827	Chromosome_1A	957	1	1	38.557993730407524	0.03308213495575221	86.20689655172414	1	1	86.20689655172414	1	1	NA	NA	NA	89.03479973736047	42	1	NA	NA	NA	NA	no Swiss-Prot hit
GN001446	Chromosome_1A	915	1	1	45.24590163934426	0.036757321335315146	83.33333333333333	1	1	83.33333333333333	1	1	NA	NA	NA	50.35335689045937	14	0.6428571428571429	NA	NA	NA	NA	no Swiss-Prot hit
GN001445	Chromosome_1A	1899	3	17	33.438651922064246	0.3266650476595228	60.49822064056939	17	0.8235294117647058	80.8108108108108	7	1	50.53050397877984	10	0.7	70.57086614173228	18	0.9444444444444444	methylated (>=50%)	Q96DX4	RING finger and SPRY domain-containing protein 1	NA	hit, no GO BP
GN001437	Chromosome_1A	1178	5	23	39.38879456706282	0.5249249249249249	98.30623306233062	23	1	98.25726141078839	18	1	98.5239852398524	5	1	94.14764448761535	54	1	methylated (>=50%)	Q8K2V1	Serine/threonine-protein phosphatase 4 regulatory subunit 1	NA	hit, no GO BP
GN001438	Chromosome_1A	4676	6	78	37.51069289991446	0.4792563752498262	94.72850678733032	78	1	96.60404624277457	35	1	93.87351778656127	43	1	91.16104868913858	48	0.9791666666666666	methylated (>=50%)	Q8TF05	Serine/threonine-protein phosphatase 4 regulatory subunit 1	protein phosphorylation [GO:0006468]; signal transduction [GO:0007165]	hit with GO BP
GN001439	Chromosome_1A	638	3	11	39.49843260188088	0.4546809199870424	84.95049504950495	11	0.9090909090909091	83.58531317494601	10	0.9	100	1	1	94.14664202094886	32	1	methylated (>=50%)	Q8TF05	Serine/threonine-protein phosphatase 4 regulatory subunit 1	protein phosphorylation [GO:0006468]; signal transduction [GO:0007165]	hit with GO BP
GN005828	Chromosome_1A	4690	3	153	44.26439232409382	0.7684383108642829	0.7168458781362007	19	0	0.7434944237918215	18	0	0	1	0	0.5277044854881267	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001440	Chromosome_1A	10698	9	351	37.4649467190129	0.9353245752366273	1.1016433353621424	331	0	0.4716981132075472	50	0	1.240528896152132	281	0	0.5203550658096112	64	0	unmethylated (<10%)	P04069	Carboxypeptidase B (EC 3.4.17.2)	proteolysis [GO:0006508]	hit with GO BP
GN005829	Chromosome_1A	6378	6	170	35.010975227344	0.869794716702632	0.8683240157012014	170	0	0.7703595011005135	77	0	0.9153318077803204	93	0	0.2471169686985173	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005830	Chromosome_1A	567	1	14	43.5626102292769	0.5267418712674187	87.09122203098107	14	1	87.09122203098107	14	1	NA	NA	NA	79.94628469113698	16	0.9375	methylated (>=50%)	Q2T9W1	Sorting nexin-20	protein transport [GO:0015031]	hit with GO BP
GN005831	Chromosome_1A	1944	1	30	38.2201646090535	0.4244170814776002	57.29492798998122	30	0.5333333333333333	57.29492798998122	30	0.5333333333333333	NA	NA	NA	0.8835758835758836	46	0	methylated (>=50%)	Q8N4N3	Kelch-like protein 36	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN005832	Chromosome_1A	6012	6	190	38.938789088489685	0.8356854086465654	0.7983692882622728	190	0	0.8709308966304968	116	0	0.6918238993710691	74	0	0.9315657470440702	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001435	Chromosome_1A	238	1	6	44.95798319327731	0.6181818181818182	2.5316455696202533	6	0	2.5316455696202533	6	0	NA	NA	NA	0.8740359897172236	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005833	Chromosome_1A	6382	5	103	35.7724851143842	0.5105512760170312	9.040940106141015	103	0.10679611650485436	24.145962732919255	22	0.36363636363636365	4.162487462387161	81	0.037037037037037035	0.6958942240779401	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005834	Chromosome_1A	801	1	12	39.076154806491886	0.3980124223602485	92.73648648648648	12	1	92.73648648648648	12	1	NA	NA	NA	86.68267947691487	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005835	Chromosome_1A	1451	4	59	41.07512060647829	0.9653372123180316	0.6535947712418301	59	0	0.7802340702210663	42	0	0.33112582781456956	17	0	0.8119079837618404	47	0	unmethylated (<10%)	Q5R541	GTP-binding protein GEM	NA	hit, no GO BP
GN001431	Chromosome_1A	3851	3	114	38.63931446377564	0.7931140385741023	0.9545548869059971	114	0	1.0857763300760044	27	0	0.9235505387378142	87	0	1.9230769230769231	23	0	unmethylated (<10%)	Q9SXD5	Flavin-containing monooxygenase FMO GS-OX-like 3 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase-like 3)	NA	hit, no GO BP
GN001430	Chromosome_1A	204	1	9	47.549019607843135	0.7996515679442509	0	9	0	0	9	0	NA	NA	NA	0.7890961262553802	43	0	unmethylated (<10%)	A3SLM3	Trimethylamine monooxygenase (TMA monooxygenase) (Tmm) (EC 1.14.13.148)	NA	hit, no GO BP
GN001429	Chromosome_1A	2424	1	85	39.397689768976896	0.9037079923155873	0.4985754985754986	85	0	0.4985754985754986	85	0	NA	NA	NA	0.5184331797235023	33	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN005838	Chromosome_1A	1844	2	64	39.42516268980477	0.8943993937097385	0.5584363781412046	64	0	0.36101083032490977	27	0	0.6563245823389021	37	0	0.6030701754385965	43	0	unmethylated (<10%)	Q94BV5	Flavin-containing monooxygenase FMO GS-OX-like 4 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase-like 4)	NA	hit, no GO BP
GN001427	Chromosome_1A	1610	2	48	34.72049689440994	0.9935971611509682	0.3685092127303183	47	0	0.5084745762711864	14	0	0.33402922755741127	33	0	1.052128168340507	43	0	unmethylated (<10%)	Q93Y23	Flavin-containing monooxygenase FMO GS-OX4 (EC 1.14.13.237) (Flavin-monooxygenase glucosinolate S-oxygenase 4)	glucosinolate biosynthetic process [GO:0019761]	hit with GO BP
GN005839	Chromosome_1A	2512	2	36	35.07165605095541	0.46655316514471445	84.11669367909238	36	0.9722222222222222	84.63541666666667	20	0.95	83.7488457987073	16	1	90.49429657794677	27	0.9629629629629629	methylated (>=50%)	Q94BV5	Flavin-containing monooxygenase FMO GS-OX-like 4 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase-like 4)	NA	hit, no GO BP
GN005840	Chromosome_1A	225	1	4	50.22222222222222	0.28213166144200624	73.80952380952381	4	1	73.80952380952381	4	1	NA	NA	NA	81.5668202764977	26	0.9615384615384616	NA	NA	NA	NA	no Swiss-Prot hit
GN005841	Chromosome_1A	204	1	6	48.03921568627451	0.5204081632653061	0.5747126436781609	6	0	0.5747126436781609	6	0	NA	NA	NA	39.65351299326275	19	0.42105263157894735	unmethylated (<10%)	Q8MP06	Senecionine N-oxygenase (SNO) (EC 1.14.13.101)	alkaloid metabolic process [GO:0009820]; protein homotetramerization [GO:0051289]	hit with GO BP
GN005842	Chromosome_1A	513	1	0	38.98635477582846	0	NA	0	NA	NA	NA	NA	NA	NA	NA	86.63426488456865	39	1	NA	NA	NA	NA	no Swiss-Prot hit
GN001424	Chromosome_1A	589	1	0	37.69100169779287	0	NA	0	NA	NA	NA	NA	NA	NA	NA	92.57731958762886	28	1	NA	NA	NA	NA	no Swiss-Prot hit
GN005843	Chromosome_1A	16064	18	264	35.81922310756972	0.5158936486107571	92.47888358428204	244	0.9918032786885246	95.30864197530865	54	1	91.86410371032633	190	0.9894736842105263	83.76068376068376	13	1	methylated (>=50%)	Q7YR26	DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I)	chromatin remodeling [GO:0006338]; chromosome segregation [GO:0007059]; circadian regulation of gene expression [GO:0032922]; DNA replication [GO:0006260]; DNA topological change [GO:0006265]	hit with GO BP
GN005844	Chromosome_1A	12191	17	151	36.79763760150931	0.3685686129410992	90.6226064120801	151	0.9735099337748344	96.72970843183609	48	1	88.27450386305105	103	0.9611650485436893	100	2	1	methylated (>=50%)	Q8IRG6	FACT complex subunit spt16 (Facilitates chromatin transcription complex subunit SPT16) (dSPT16)	chromatin remodeling [GO:0006338]; nucleosome disassembly [GO:0006337]; nucleosome organization [GO:0034728]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; regulation of chromatin organization [GO:1902275]; regulation of DNA-templated transcription elongation [GO:0032784]; transcription elongation-coupled chromatin remodeling [GO:0140673]; transcription pausing by RNA polymerase II [GO:0160239]	hit with GO BP
GN005845	Chromosome_1A	16069	10	233	35.54670483539735	0.46062947709664226	88.57812626303452	232	0.9224137931034483	81.34556574923548	33	0.7575757575757576	89.6795827123696	199	0.949748743718593	0.8339651250947687	25	0	methylated (>=50%)	P26696	Mitogen-activated protein kinase 1 (MAP kinase 1) (MAPK 1) (EC 2.7.11.24) (M phase MAP kinase) (Myelin basic protein kinase) (MBP kinase) (Myelin xP42 protein kinase)	cell surface receptor signaling pathway [GO:0007166]; intracellular signal transduction [GO:0035556]; mitotic spindle assembly checkpoint signaling [GO:0007094]; positive regulation of smoothened signaling pathway [GO:0045880]; response to epidermal growth factor [GO:0070849]	hit with GO BP
GN020426	Chromosome_1A	359	1	4	44.56824512534819	0.22451532207629768	0.8658008658008658	4	0	0.8658008658008658	4	0	NA	NA	NA	0.537109375	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005846	Chromosome_1A	3611	6	96	35.33647189144281	0.8523210070810385	0.7574423110797956	96	0	1.0036978341257263	39	0	0.6342494714587738	57	0	0.4714959279897128	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001421	Chromosome_1A	1675	3	45	38.208955223880594	0.7389705882352942	0.6003430531732419	45	0	0.6085192697768763	29	0	0.5861664712778429	16	0	4.838709677419355	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005847	Chromosome_1A	483	1	15	47.82608695652174	0.543918918918919	0.6806930693069307	15	0	0.6806930693069307	15	0	NA	NA	NA	0.5182689816014512	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001419	Chromosome_1A	1281	2	49	41.21779859484778	0.9012448490243657	0.6760019314340898	49	0	0.5569620253164557	47	0	3.125	2	0	0.8879023307436182	51	0	unmethylated (<10%)	Q8MJ08	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN005849	Chromosome_1A	282	1	9	50.354609929078016	0.5084134615384616	1.342281879194631	9	0	1.342281879194631	9	0	NA	NA	NA	1.5690376569037656	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005850	Chromosome_1A	1020	1	77	66.76470588235294	0.677536231884058	10	1	0	10	1	0	NA	NA	NA	10.818713450292398	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011510	Chromosome_1A	731	2	22	49.3844049247606	0.5373563218390804	0.45454545454545453	19	0	0.554016620498615	17	0	0	2	0	0.6824568446407066	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005851	Chromosome_1A	321	1	12	54.517133956386296	0.5676392572944297	0.8264462809917356	9	0	0.8264462809917356	9	0	NA	NA	NA	0.34071550255536626	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001415	Chromosome_1A	2333	2	70	37.0338619802829	0.8777842277261781	0.42092603728202044	70	0	0.40160642570281124	26	0	0.42652190771616905	44	0	0.4500818330605565	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001414	Chromosome_1A	1119	1	47	43.34226988382484	0.8943779334739134	0.7879656160458453	47	0	0.7879656160458453	47	0	NA	NA	NA	0.8040626322471435	45	0	unmethylated (<10%)	Q20929	G protein-coupled receptor dmsr-1 (Dromyosuppressin receptor related 1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of cellular response to heat [GO:1900034]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]	hit with GO BP
GN005853	Chromosome_1A	7902	5	109	39.78739559605163	0.3485955894048258	87.46002740977616	109	0.9724770642201835	87.85211267605634	14	1	87.4015748031496	95	0.968421052631579	85.67708333333333	21	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005854	Chromosome_1A	12221	8	185	36.89550773259144	0.44891518228551347	88.37629601445829	185	0.9891891891891892	94.00662251655629	60	0.9833333333333333	86.10703323101562	125	0.992	95.91836734693878	34	0.9705882352941176	methylated (>=50%)	D3YWJ0	Nuclear GTPase SLIP-GC (EC 3.6.1.-) (Speckled-like pattern in the germinal center)	cellular response to lipopolysaccharide [GO:0071222]; DNA damage response [GO:0006974]; negative regulation of apoptotic process [GO:0043066]; regulation of nuclear cell cycle DNA replication [GO:0033262]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN005855	Chromosome_1A	3385	3	48	39.29098966026588	0.38178126997255535	95.92310241962214	48	0.9791666666666666	96.30459126539753	41	1	92.89940828402366	7	0.8571428571428571	96.02947196070406	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005856	Chromosome_1A	7525	7	114	39.28239202657807	0.4038902657667159	95.22344322344323	113	0.9911504424778761	95.52738158126431	96	0.9895833333333334	93.717277486911	17	1	95.03424657534246	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005857	Chromosome_1A	726	1	18	42.56198347107438	0.5537757437070938	51.83673469387755	18	0.7222222222222222	51.83673469387755	18	0.7222222222222222	NA	NA	NA	43.081267649827424	45	0.5111111111111111	methylated (>=50%)	Q6NV18	Non-homologous end-joining factor 1 (Protein cernunnos) (XRCC4-like factor)	double-strand break repair via nonhomologous end joining [GO:0006303]; immunoglobulin V(D)J recombination [GO:0033152]; telomere maintenance [GO:0000723]	hit with GO BP
GN005858	Chromosome_1A	10049	4	263	36.56085182605234	0.7843165011162817	1.0789283128167995	257	0	2.4324324324324325	11	0	1.0022953328232593	246	0	0.5716619028174765	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005859	Chromosome_1A	46279	15	639	36.58030640247196	0.4129436899684207	61.674214482468834	439	0.6514806378132119	84.6381429221666	107	0.9345794392523364	55.74743024963289	332	0.5602409638554217	5.166846071044134	40	0	methylated (>=50%)	Q08AE8	Protein spire homolog 1 (Spir-1)	actin cytoskeleton organization [GO:0030036]; actin filament network formation [GO:0051639]; actin nucleation [GO:0045010]; cleavage furrow formation [GO:0036089]; establishment of meiotic spindle localization [GO:0051295]; formin-nucleated actin cable assembly [GO:0070649]; Golgi vesicle transport [GO:0048193]; intracellular transport [GO:0046907]; polar body extrusion after meiotic divisions [GO:0040038]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of mitochondrial fission [GO:0090141]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN005860	Chromosome_1A	1533	2	22	40.900195694716245	0.3462201782121299	81.06508875739645	22	0.9545454545454546	96.40287769784173	5	1	78.62857142857143	17	0.9411764705882353	90.48843187660668	26	1	methylated (>=50%)	Q5ZIW5	Protein VAC14 homolog	phosphatidylinositol biosynthetic process [GO:0006661]	hit with GO BP
GN005861	Chromosome_1A	1377	1	14	41.75744371822803	0.2342007434944238	91.48148148148148	9	1	91.48148148148148	9	1	NA	NA	NA	87.13253012048193	30	1	methylated (>=50%)	Q9Y4A0	Jerky protein homolog-like (Human homolog of mouse jerky gene protein) (HHMJG)	central nervous system development [GO:0007417]	hit with GO BP
GN005862	Chromosome_1A	4683	6	68	37.924407431133886	0.4219545030529172	92.5495262704565	64	1	93.446088794926	24	1	91.93313953488372	40	1	89.25233644859813	12	1	methylated (>=50%)	Q66L58	Protein VAC14 homolog	phosphatidylinositol biosynthetic process [GO:0006661]	hit with GO BP
GN001402	Chromosome_1A	11987	8	152	36.74814382247435	0.3790595452676849	81.6505609241364	150	0.8666666666666667	73.76725838264299	21	0.7619047619047619	82.65114532482163	129	0.8837209302325582	11.044520547945206	31	0.0967741935483871	methylated (>=50%)	Q66L58	Protein VAC14 homolog	phosphatidylinositol biosynthetic process [GO:0006661]	hit with GO BP
GN005864	Chromosome_1A	231	1	10	49.78354978354978	0.7142857142857143	0	10	0	0	10	0	NA	NA	NA	48.8515043675186	54	0.4444444444444444	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005865	Chromosome_1A	4469	3	142	37.50279704631909	0.9069002378012531	0.8306188925081434	136	0	0.8	45	0	0.8348794063079777	91	0	0.4711425206124853	39	0	unmethylated (<10%)	P55088	Aquaporin-4 (AQP-4) (Mercurial-insensitive water channel) (MIWC) (WCH4)	carbon dioxide transport [GO:0015670]; cell-cell adhesion [GO:0098609]; cellular response to glucose stimulus [GO:0071333]; cellular response to type II interferon [GO:0071346]; cerebrospinal fluid circulation [GO:0090660]; cerebrospinal fluid secretion [GO:0033326]; intracellular water homeostasis [GO:0009992]; multicellular organismal-level water homeostasis [GO:0050891]; negative regulation of cell adhesion molecule production [GO:0060354]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-6 production [GO:0032715]; protein homotetramerization [GO:0051289]; regulation of vascular endothelial growth factor production [GO:0010574]; renal water absorption [GO:0070295]; sensory perception of sound [GO:0007605]; water transport [GO:0006833]	hit with GO BP
GN005866	Chromosome_1A	846	1	32	41.843971631205676	0.8695596312594354	0.46029919447640966	32	0	0.46029919447640966	32	0	NA	NA	NA	0.4820333041191937	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005867	Chromosome_1A	846	1	35	41.25295508274232	0.9782608695652174	0.22988505747126436	35	0	0.22988505747126436	35	0	NA	NA	NA	0.6854256854256854	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005868	Chromosome_1A	1865	3	64	41.34048257372654	0.8085734801988917	0.5509641873278237	63	0	0.5166051660516605	48	0	0.6075334143377886	15	0	1.0642071656615821	57	0	unmethylated (<10%)	P55088	Aquaporin-4 (AQP-4) (Mercurial-insensitive water channel) (MIWC) (WCH4)	carbon dioxide transport [GO:0015670]; cell-cell adhesion [GO:0098609]; cellular response to glucose stimulus [GO:0071333]; cellular response to type II interferon [GO:0071346]; cerebrospinal fluid circulation [GO:0090660]; cerebrospinal fluid secretion [GO:0033326]; intracellular water homeostasis [GO:0009992]; multicellular organismal-level water homeostasis [GO:0050891]; negative regulation of cell adhesion molecule production [GO:0060354]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-6 production [GO:0032715]; protein homotetramerization [GO:0051289]; regulation of vascular endothelial growth factor production [GO:0010574]; renal water absorption [GO:0070295]; sensory perception of sound [GO:0007605]; water transport [GO:0006833]	hit with GO BP
GN005869	Chromosome_1A	25530	14	666	36.68233450842146	0.7817524609162391	2.037198308036825	664	0	1.4027431421446384	94	0	2.1075179657269207	570	0	28.6973555337904	26	0.38461538461538464	unmethylated (<10%)	B0JZG0	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2)	L-ascorbic acid transmembrane transport [GO:0015882]	hit with GO BP
GN001396	Chromosome_1A	735	2	26	40.68027210884354	0.8610435252771019	0.5434782608695652	26	0	0.4854368932038835	24	0	1.0416666666666667	2	0	1.0410094637223974	53	0	unmethylated (<10%)	P42325	Neurocalcin homolog (DrosNCa)	negative regulation of neuronal signal transduction [GO:1902848]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN005870	Chromosome_1A	20291	15	274	35.75969641713075	0.42239579772047303	87.788881948782	269	0.9888475836431226	93.1840311587147	55	1	86.75841547331225	214	0.985981308411215	74.5431632010082	18	1	methylated (>=50%)	Q04678	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) (Structure-specific recognition protein 1) (T160)	regulation of chromatin organization [GO:1902275]	hit with GO BP
GN005871	Chromosome_1A	2534	2	28	39.02920284135754	0.29785483397002643	61.65137614678899	20	0.7	57.5492341356674	16	0.625	82.95454545454545	4	1	79.02097902097903	26	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001383	Chromosome_1A	198	1	0	43.93939393939394	0	NA	0	NA	NA	NA	NA	NA	NA	NA	80.41982105987611	38	0.9736842105263158	NA	Q04678	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) (Structure-specific recognition protein 1) (T160)	regulation of chromatin organization [GO:1902275]	hit with GO BP
GN001384	Chromosome_1A	1435	3	18	38.88501742160279	0.3391544117647059	85.23255813953489	18	0.9444444444444444	84.08736349453979	13	0.9230769230769231	88.58447488584476	5	1	77.54698318496538	19	0.9473684210526315	methylated (>=50%)	Q04678	FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) (Structure-specific recognition protein 1) (T160)	regulation of chromatin organization [GO:1902275]	hit with GO BP
GN001385	Chromosome_1A	1265	2	10	38.023715415019765	0.23454592650276262	76.41996557659208	10	0.8	62.43386243386244	4	0.75	83.16326530612245	6	0.8333333333333334	80.07863695937091	16	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001386	Chromosome_1A	7746	6	101	36.664084688871675	0.38799166236444277	83.70052641840515	101	0.9306930693069307	87.91714614499425	21	0.8571428571428571	82.84037558685446	80	0.95	53.152492668621704	33	0.42424242424242425	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005874	Chromosome_1A	979	2	12	40.96016343207354	0.30961416824794435	79.25	12	0.8333333333333334	82.02898550724638	11	0.8181818181818182	61.81818181818182	1	1	86.27232142857143	16	1	methylated (>=50%)	P20807	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)	apoptotic process [GO:0006915]; calcium-dependent self proteolysis [GO:1990092]; cellular response to calcium ion [GO:0071277]; cellular response to salt stress [GO:0071472]; G1 to G0 transition involved in cell differentiation [GO:0070315]; muscle cell cellular homeostasis [GO:0046716]; muscle organ development [GO:0007517]; muscle structure development [GO:0061061]; myofibril assembly [GO:0030239]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of protein sumoylation [GO:0033234]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of proteolysis [GO:0045862]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; positive regulation of satellite cell activation involved in skeletal muscle regeneration [GO:0014718]; protein catabolic process [GO:0030163]; protein destabilization [GO:0031648]; protein localization to membrane [GO:0072657]; protein-containing complex assembly [GO:0065003]; proteolysis [GO:0006508]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of myoblast differentiation [GO:0045661]; response to calcium ion [GO:0051592]; response to muscle activity [GO:0014850]; sarcomere organization [GO:0045214]; self proteolysis [GO:0097264]	hit with GO BP
GN005875	Chromosome_1A	265	2	3	38.113207547169814	0.32878411910669975	86.55737704918033	3	1	87.6847290640394	2	1	84.31372549019608	1	1	82.92544109277178	29	0.9655172413793104	NA	NA	NA	NA	no Swiss-Prot hit
GN005876	Chromosome_1A	1772	3	58	37.64108352144469	0.9275644843955885	0.6116207951070336	58	0	0.5721551176096631	36	0	0.6711409395973155	22	0	0.4357931435212086	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001380	Chromosome_1A	174	1	9	51.724137931034484	0.7985721570627231	0.6263048016701461	9	0	0.6263048016701461	9	0	NA	NA	NA	1.1926273942898447	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005877	Chromosome_1A	900	2	29	41.111111111111114	0.7636938202247191	0.20408163265306123	13	0	0.29239766081871343	11	0	0	2	0	0.7473841554559043	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001372	Chromosome_1A	2508	1	83	40.03189792663477	0.8261525273050546	3.257575757575758	47	0	3.257575757575758	47	0	NA	NA	NA	9.027777777777779	16	0	unmethylated (<10%)	P0AFQ9	Uncharacterized metal-dependent hydrolase YcfH (EC 3.1.-.-)	NA	hit, no GO BP
GN001371	Chromosome_1A	399	1	11	44.3609022556391	0.585981308411215	0	2	0	0	2	0	NA	NA	NA	6.179775280898877	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001370	Chromosome_1A	797	2	9	42.15809284818068	0.2614067055393586	12.121212121212121	6	0	5.555555555555555	4	0	20	2	0	2.1319120586275817	32	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001369	Chromosome_1A	1344	1	42	39.657738095238095	0.8197502178332849	0.5172026085001125	42	0	0.5172026085001125	42	0	NA	NA	NA	1.0206123674204524	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001368	Chromosome_1A	522	1	20	39.272030651341	1.044	0.36610878661087864	19	0	0.36610878661087864	19	0	NA	NA	NA	0.49718979680069175	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005880	Chromosome_1A	3545	3	31	35.2327221438646	0.28197871335906066	3.7906137184115525	29	0	4.342105263157895	19	0	2.586206896551724	10	0	0.7847872019317839	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001366	Chromosome_1A	531	1	4	33.709981167608284	0.2798418972332016	3.459119496855346	4	0	3.459119496855346	4	0	NA	NA	NA	1.8518518518518519	39	0	NA	P0CT33	ATP-dependent DNA helicase tlh1 (EC 5.6.2.4) (DNA 3'-5' helicase tlh1) (Sub-telomeric helicase RecQ homolog 1) (Telomere-linked helicase 1)	telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN001365	Chromosome_1A	240	1	7	43.333333333333336	0.6296851574212894	0	7	0	0	7	0	NA	NA	NA	0.6305531670965893	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001364	Chromosome_1A	1892	2	61	39.5877378435518	0.8505313425796277	0.7601162530739995	61	0	0.8192389006342494	55	0	0.43541364296081275	6	0	0.44291338582677164	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001363	Chromosome_1A	2267	4	16	37.97970886634319	0.19844621949885108	37.960339943342774	14	0.6428571428571429	57.916666666666664	7	0.8571428571428571	27.682403433476395	7	0.42857142857142855	28.992460589444825	36	0.5555555555555556	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001362	Chromosome_1A	36745	27	427	36.63899850319771	0.3509663201855916	84.5958795562599	406	0.9408866995073891	87.21461187214612	52	0.9615384615384616	84.20833766503794	354	0.9378531073446328	23.076923076923077	18	0.3888888888888889	methylated (>=50%)	Q9Y4C8	Probable RNA-binding protein 19 (RNA-binding motif protein 19)	positive regulation of embryonic development [GO:0040019]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN001361	Chromosome_1A	282	1	11	44.680851063829785	0.7817540322580645	85.17350157728707	11	0.8181818181818182	85.17350157728707	11	0.8181818181818182	NA	NA	NA	92.72727272727273	3	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001360	Chromosome_1A	324	1	2	36.72839506172839	0.18409090909090908	77.94117647058823	2	1	77.94117647058823	2	1	NA	NA	NA	83.52098259979529	32	0.96875	NA	NA	NA	NA	no Swiss-Prot hit
GN020592	Chromosome_1A	7584	5	86	33.860759493670884	0.3971901747462845	17.345243041130036	86	0.023255813953488372	19.318181818181817	9	0	17.146776406035666	77	0.025974025974025976	1.7039922103213243	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001337	Chromosome_1A	13814	5	469	41.5882438106269	0.7888018958227663	1.4214394674802384	353	0	0.1890359168241966	23	0	1.5190062855432505	330	0	0.9584664536741214	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001336	Chromosome_1A	1989	3	43	34.841628959276015	0.7168709033912796	35.762400489895896	42	0.3333333333333333	37.80234968901175	19	0.3684210526315789	34.139637163276525	23	0.30434782608695654	1.3986013986013985	82	0	sparse (10-50%)	Q9QZ67	Protein phosphatase 1D (EC 3.1.3.16) (Protein phosphatase 2C isoform delta) (PP2C-delta) (Protein phosphatase magnesium-dependent 1 delta) (p53-induced protein phosphatase 1)	cellular response to starvation [GO:0009267]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; G2/M transition of mitotic cell cycle [GO:0000086]; negative regulation of gene expression, epigenetic [GO:0045814]; peptidyl-threonine dephosphorylation [GO:0035970]; regulation of intracellular signal transduction [GO:1902531]; response to bacterium [GO:0009617]	hit with GO BP
GN005884	Chromosome_1A	1209	1	19	40.52936311000827	0.3836108281424826	97.2181551976574	19	1	97.2181551976574	19	1	NA	NA	NA	96.08967674661105	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001334	Chromosome_1A	4200	3	111	35.54761904761905	0.836755499396933	0.7292327203551047	111	0	0.6596306068601583	15	0	0.7387387387387387	96	0	0.46491969568892644	60	0	unmethylated (<10%)	C4N147	Sodium/calcium exchanger regulatory protein 1 (ReP1-NCXSQ) (Fatty acid-binding protein 1) (Na(+)/Ca(2+) exchanger regulatory protein 1)	NA	hit, no GO BP
GN005885	Chromosome_1A	7091	7	112	34.48032717529262	0.5325858369098713	67.30025039836103	111	0.7927927927927928	57.10382513661202	16	0.625	68.75650364203955	95	0.8210526315789474	0.49784268171257884	58	0	methylated (>=50%)	Q6DJ48	CST complex subunit STN1 (Oligonucleotide/oligosaccharide-binding fold-containing protein 1) (Suppressor of cdc thirteen homolog)	telomere capping [GO:0016233]; telomere maintenance [GO:0000723]; telomere maintenance via telomere lengthening [GO:0010833]	hit with GO BP
GN005886	Chromosome_1A	5298	4	148	40.50585126462816	0.6818977549928906	1.675392670157068	145	0	1.897018970189702	41	0	1.6085059978189749	104	0	1.1771147002463729	56	0	unmethylated (<10%)	P27365	3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type I) (3-beta-HSD I) (3-beta-hydroxy-5-ene steroid dehydrogenase) (3-beta-hydroxy-Delta(5)-steroid dehydrogenase) (EC 1.1.1.145) (3-beta-hydroxysteroid 3-dehydrogenase) (EC 1.1.1.270) (Delta-5-3-ketosteroid isomerase) (Dihydrotestosterone oxidoreductase) (EC 1.1.1.210) (Steroid Delta-isomerase) (EC 5.3.3.1)	androgen biosynthetic process [GO:0006702]; C21-steroid hormone metabolic process [GO:0008207]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN001332	Chromosome_1A	11403	13	157	34.499693063228975	0.4627418655703154	86.86351310635733	157	0.9936305732484076	89.3732970027248	20	1	86.55149051490515	137	0.9927007299270073	90.78896230081617	33	1	methylated (>=50%)	Q05AW9	Nonsense-mediated mRNA decay factor SMG9 (Protein smg-9 homolog)	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]	hit with GO BP
GN001331	Chromosome_1A	6803	6	97	37.73335293252977	0.4040746020432407	91.63525399389697	95	1	92.01930215293244	56	1	91.27563434132777	39	1	79.04849039341262	21	1	methylated (>=50%)	Q2KN95	Cytospin-A (SPECC1-like protein) (Sperm antigen with calponin homology and coiled-coil domains 1-like)	NA	hit, no GO BP
GN001330	Chromosome_1A	11728	7	111	35.8543656207367	0.2959101100711562	83.97806432488514	111	0.954954954954955	84.61538461538461	3	1	83.95909645909646	108	0.9537037037037037	17.11026615969582	32	0.1875	methylated (>=50%)	Q9CWQ2	Zinc finger SWIM domain-containing protein 7 (SWIM domain-containing and Srs2-interacting protein 1 homolog)	DNA recombinase assembly [GO:0000730]; double-strand break repair involved in meiotic recombination [GO:1990918]; double-strand break repair via homologous recombination [GO:0000724]; protein stabilization [GO:0050821]	hit with GO BP
GN001329	Chromosome_1A	1300	4	24	34.92307692307692	0.6074766355140186	11.601150527325023	24	0.125	3.6496350364963503	8	0	14.434330299089726	16	0.1875	79.209726443769	26	0.8076923076923077	sparse (10-50%)	Q8VC97	Beta-ureidopropionase (EC 3.5.1.6) (Beta-alanine synthase) (N-carbamoyl-beta-alanine amidohydrolase)	beta-alanine biosynthetic process [GO:0019483]; CMP catabolic process [GO:0006248]; dCMP catabolic process [GO:0006249]; dTMP catabolic process [GO:0046074]; dUMP catabolic process [GO:0046079]; in utero embryonic development [GO:0001701]; liver development [GO:0001889]; protein homooligomerization [GO:0051260]; protein homotetramerization [GO:0051289]; pyrimidine nucleoside catabolic process [GO:0046135]; UMP catabolic process [GO:0046050]	hit with GO BP
GN001328	Chromosome_1A	654	1	1	35.62691131498471	0.04825855962219599	77.27272727272727	1	1	77.27272727272727	1	1	NA	NA	NA	100	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN005889	Chromosome_1A	5702	10	61	33.917923535601545	0.3738152429161763	93.011035207567	60	1	91.97916666666667	19	1	93.35910049191848	41	1	88.0524861878453	23	1	methylated (>=50%)	Q9VI04	Beta-ureidopropionase pyd3 (EC 3.5.1.6) (N-carbamoyl-beta-alanine amidohydrolase) (beta-Alanine synthase)	beta-alanine biosynthetic process [GO:0019483]; pyrimidine nucleobase catabolic process [GO:0006208]	hit with GO BP
GN001327	Chromosome_1A	4600	9	48	33.04347826086956	0.3857334525939177	65.18900343642612	48	0.7708333333333334	66.19850187265918	21	0.8571428571428571	64.60369163952225	27	0.7037037037037037	13.345864661654135	22	0.13636363636363635	methylated (>=50%)	Q5BL38	Ceramide glucosyltransferase (EC 2.4.1.80) (Glycosylceramide synthase) (UDP-glucose ceramide glucosyltransferase)	glycosphingolipid catabolic process [GO:0046479]	hit with GO BP
GN001326	Chromosome_1A	489	1	21	46.421267893660534	0.806930693069307	1.0217113665389528	21	0	1.0217113665389528	21	0	NA	NA	NA	0.583864118895966	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001325	Chromosome_1A	12862	19	140	34.90125952417976	0.36151714008196917	78.69528441530979	140	0.9285714285714286	74.87080103359173	25	0.88	79.44374209860935	115	0.9391304347826087	70.86183310533515	22	0.7727272727272727	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005891	Chromosome_1A	4082	8	28	36.06075453209211	0.21112285083085197	77.4910394265233	27	0.9259259259259259	70.44334975369458	4	1	78.69127516778524	23	0.9130434782608695	86.06409794742528	41	0.926829268292683	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005892	Chromosome_1A	11391	8	138	36.17768413659907	0.3720298938266474	83.73363832761468	131	0.9389312977099237	83.53658536585365	10	1	83.74678053409245	121	0.9338842975206612	6.902654867256637	12	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005893	Chromosome_1A	426	1	21	46.244131455399064	0.9454660748256183	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN005894	Chromosome_1A	309	1	12	47.57281553398058	0.687175685693106	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN005895	Chromosome_1A	921	1	34	39.84799131378936	0.9299714896650035	1.0493179433368311	34	0	1.0493179433368311	34	0	NA	NA	NA	0.5071461502996772	45	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN005896	Chromosome_1A	1726	2	44	33.893395133256085	0.8898366648700583	0.49645390070921985	43	0	0.966183574879227	16	0	0.30120481927710846	27	0	1.2587412587412588	60	0	unmethylated (<10%)	Q99JA8	Neuroglobin (Nitrite reductase) (EC 1.7.-.-)	cellular response to hydrogen peroxide [GO:0070301]; cellular response to hypoxia [GO:0071456]; negative regulation of apoptotic process [GO:0043066]; neuron projection development [GO:0031175]; oxygen transport [GO:0015671]; positive regulation of catalytic activity [GO:0043085]; response to hypoxia [GO:0001666]; response to iron ion [GO:0010039]	hit with GO BP
GN001322	Chromosome_1A	435	1	13	41.37931034482759	0.7344155844155844	0.9478672985781991	13	0	0.9478672985781991	13	0	NA	NA	NA	0.7530120481927711	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001321	Chromosome_1A	732	1	32	46.85792349726776	0.809119170984456	0.8298755186721992	32	0	0.8298755186721992	32	0	NA	NA	NA	0.8123129542539547	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001320	Chromosome_1A	5604	6	77	36.170592433975735	0.4222497519389858	84.78768991040124	77	0.974025974025974	91.26984126984127	16	1	83.44308560677328	61	0.9672131147540983	78.10526315789474	12	0.8333333333333334	methylated (>=50%)	A5HK05	Amyloid protein-binding protein 2 (Amyloid beta precursor protein-binding protein 2) (APP-BP2)	intracellular protein transport [GO:0006886]; negative regulation of beige fat cell differentiation [GO:0160276]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN005898	Chromosome_1A	15947	7	280	34.97209506490249	0.574336109256037	90.38048882608469	256	0.94921875	93.01430143014302	32	0.96875	90.10353403898432	224	0.9464285714285714	0.6004945249028611	47	0	methylated (>=50%)	Q15056	Eukaryotic translation initiation factor 4H (eIF-4H) (Williams-Beuren syndrome chromosomal region 1 protein)	regulation of translational initiation [GO:0006446]	hit with GO BP
GN005899	Chromosome_1A	927	1	13	42.71844660194175	0.3085253456221198	73.71273712737127	13	0.9230769230769231	73.71273712737127	13	0.9230769230769231	NA	NA	NA	66.18852459016394	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005900	Chromosome_1A	1845	6	14	35.28455284552845	0.2519311797752809	90.18867924528301	13	1	90.67524115755627	6	1	89.87603305785125	7	1	86.72659968270756	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005901	Chromosome_1A	1128	1	17	38.209219858156025	0.4251130619845704	91.75475687103594	17	1	91.75475687103594	17	1	NA	NA	NA	37.63969602145731	43	0.11627906976744186	methylated (>=50%)	O36022	Mannan polymerase complex subunit mnn9	cell wall mannoprotein biosynthetic process [GO:0000032]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN001341	Chromosome_1A	231	1	6	44.58874458874459	0.5746268656716418	0.35842293906810035	6	0	0.35842293906810035	6	0	NA	NA	NA	5.825242718446602	39	0.05128205128205128	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001348	Chromosome_1A	25204	11	392	34.94286621171243	0.5102042734393921	76.93699760111106	378	0.8994708994708994	61.87729417933927	32	0.65625	78.25112107623319	346	0.9219653179190751	0.42469781117281935	49	0	methylated (>=50%)	Q5XGK0	Protein spinster homolog 1 (Spns1)	NA	hit, no GO BP
GN001347	Chromosome_1A	7261	3	211	36.19336179589588	0.8895127704774407	1.0891253741270368	207	0	1.0923987255348202	41	0	1.0883938561692605	166	0	1.409159536990438	30	0	unmethylated (<10%)	Q8CEE7	Retinol dehydrogenase 13 (EC 1.1.1.300)	eye photoreceptor cell development [GO:0042462]; response to high light intensity [GO:0009644]; retina layer formation [GO:0010842]; retinal metabolic process [GO:0042574]	hit with GO BP
GN001346	Chromosome_1A	621	1	18	43.31723027375201	0.619829211489409	5.204778156996587	18	0	5.204778156996587	18	0	NA	NA	NA	2.2087483759203117	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005903	Chromosome_1A	2217	2	69	42.580063148398736	0.6921228848068048	10.431184668989546	69	0	10.627753303964758	32	0	10.302593659942364	37	0	6.587966488956588	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005904	Chromosome_1A	321	1	11	42.679127725856695	0.7616479723899914	0	10	0	0	10	0	NA	NA	NA	0.37037037037037035	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005905	Chromosome_1A	524	2	12	42.74809160305343	0.5012755102040817	1.477832512315271	12	0	1.477832512315271	12	0	NA	NA	NA	0.5081874647092038	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001342	Chromosome_1A	369	2	5	40.65040650406504	0.3436394114360216	0.7407407407407407	5	0	0.7407407407407407	5	0	NA	NA	NA	0.29850746268656714	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005906	Chromosome_1A	11226	6	159	33.74309638339569	0.49938840145037827	83.38307584269663	151	0.9271523178807947	89.96763754045307	5	1	83.19949472164576	146	0.9246575342465754	16.39267261625176	39	0.28205128205128205	methylated (>=50%)	Q9Y2Q3	Glutathione S-transferase kappa 1 (EC 2.5.1.18) (GST 13-13) (GST class-kappa) (GSTK1-1) (hGSTK1) (Glutathione S-transferase subunit 13)	epithelial cell differentiation [GO:0030855]; glutathione metabolic process [GO:0006749]; liver development [GO:0001889]; response to arsenic-containing substance [GO:0046685]; response to manganese ion [GO:0010042]	hit with GO BP
GN005907	Chromosome_1A	22640	9	372	35.59628975265018	0.5191128099946819	84.71876358749358	365	0.9397260273972603	72.93695540748334	33	0.7878787878787878	85.7032722288847	332	0.9548192771084337	3.1723750701852893	60	0	methylated (>=50%)	Q9JHX4	Caspase-8 (CASP-8) (EC 3.4.22.61) [Cleaved into: Caspase-8 subunit p18; Caspase-8 subunit p10]	angiogenesis [GO:0001525]; apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cellular response to mechanical stimulus [GO:0071260]; execution phase of apoptosis [GO:0097194]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; heart development [GO:0007507]; hepatocyte apoptotic process [GO:0097284]; macrophage differentiation [GO:0030225]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of necroptotic process [GO:0060546]; neural tube formation [GO:0001841]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cell migration [GO:0030335]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of macrophage differentiation [GO:0045651]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of proteolysis [GO:0045862]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of apoptotic signaling pathway [GO:2001233]; regulation of cytokine production [GO:0001817]; regulation of innate immune response [GO:0045088]; regulation of thymocyte apoptotic process [GO:0070243]; response to anesthetic [GO:0072347]; response to auditory stimulus [GO:0010996]; response to cobalt ion [GO:0032025]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to lipopolysaccharide [GO:0032496]; response to tumor necrosis factor [GO:0034612]; self proteolysis [GO:0097264]; TRAIL-activated apoptotic signaling pathway [GO:0036462]	hit with GO BP
GN005908	Chromosome_1A	750	1	23	42	0.6955645161290323	21.480582524271846	23	0.13043478260869565	21.480582524271846	23	0.13043478260869565	NA	NA	NA	0.44291338582677164	38	0	sparse (10-50%)	Q7T356	14-3-3 protein beta/alpha-B	intracellular protein localization [GO:0008104]	hit with GO BP
GN001314	Chromosome_1A	756	1	42	44.70899470899471	1.1244820625420548	0.2849002849002849	42	0	0.2849002849002849	42	0	NA	NA	NA	1.168091168091168	73	0	unmethylated (<10%)	Q04917	14-3-3 protein eta (Protein AS1)	glucocorticoid catabolic process [GO:0006713]; intracellular protein localization [GO:0008104]; intracellular protein transport [GO:0006886]; membrane depolarization during action potential [GO:0086010]; negative regulation of dendrite morphogenesis [GO:0050774]; nuclear receptor-mediated glucocorticoid signaling pathway [GO:0042921]; positive regulation of DNA-templated transcription [GO:0045893]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of neuron differentiation [GO:0045664]; regulation of sodium ion transport [GO:0002028]; regulation of synaptic plasticity [GO:0048167]; substantia nigra development [GO:0021762]	hit with GO BP
GN001303	Chromosome_1A	148	1	2	37.83783783783784	0.39572192513368987	75.64102564102564	2	1	75.64102564102564	2	1	NA	NA	NA	49.586776859504134	2	0.5	NA	Q99700	Ataxin-2 (Spinocerebellar ataxia type 2 protein) (Trinucleotide repeat-containing gene 13 protein)	negative regulation of receptor internalization [GO:0002091]; P-body assembly [GO:0033962]; regulation of translation [GO:0006417]; RNA metabolic process [GO:0016070]; RNA transport [GO:0050658]; stress granule assembly [GO:0034063]	hit with GO BP
GN005910	Chromosome_1A	2851	7	35	37.77621887057173	0.34421439708581125	60.51792828685259	33	0.8181818181818182	62.59580991313234	23	0.9565217391304348	53.164556962025316	10	0.5	28.174603174603174	36	0.1111111111111111	methylated (>=50%)	Q99700	Ataxin-2 (Spinocerebellar ataxia type 2 protein) (Trinucleotide repeat-containing gene 13 protein)	negative regulation of receptor internalization [GO:0002091]; P-body assembly [GO:0033962]; regulation of translation [GO:0006417]; RNA metabolic process [GO:0016070]; RNA transport [GO:0050658]; stress granule assembly [GO:0034063]	hit with GO BP
GN005911	Chromosome_1A	1389	1	49	39.66882649388049	0.8980208470774509	1.0387157695939566	49	0	1.0387157695939566	49	0	NA	NA	NA	0.647715005397625	58	0	unmethylated (<10%)	P17644	Acetylcholine receptor subunit alpha-like 2 (Nicotinic acetylcholine receptor alpha 2)	calcium ion transport [GO:0006816]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN005912	Chromosome_1A	528	1	9	39.39393939393939	0.45141065830721006	96.45892351274787	9	1	96.45892351274787	9	1	NA	NA	NA	81.48148148148148	22	0.8636363636363636	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005913	Chromosome_1A	2233	4	26	36.36363636363637	0.3534518446365518	82.33240223463687	26	1	88.14814814814815	11	1	78.81165919282512	15	1	87.26467331118494	16	1	methylated (>=50%)	E9QHE3	RING finger protein 207	positive regulation of membrane repolarization during cardiac muscle cell action potential [GO:1905033]; positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential [GO:1905026]; regulation of cardiac muscle contraction [GO:0055117]; regulation of heart looping [GO:1901207]	hit with GO BP
GN001312	Chromosome_1A	2849	3	91	41.13724113724114	0.7565916764672408	1.0446343779677112	91	0	1.0314875135722041	66	0	1.0630220197418374	25	0	0.7866273352999017	50	0	unmethylated (<10%)	Q8BLQ7	Cationic amino acid transporter 4 (CAT-4) (CAT4) (Solute carrier family 7 member 4)	amino acid transport [GO:0006865]	hit with GO BP
GN001302	Chromosome_1A	5479	8	46	37.32432925716372	0.24112686728522034	77.23177723177723	42	0.9761904761904762	78.0053428317008	26	0.9615384615384616	76.00564573041638	16	1	91.5606936416185	10	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001286	Chromosome_1A	604	2	3	34.10596026490066	0.1731485905398949	90.3225806451613	3	1	92.85714285714286	2	1	85.56701030927834	1	1	91.23020706455542	10	1	NA	Q99700	Ataxin-2 (Spinocerebellar ataxia type 2 protein) (Trinucleotide repeat-containing gene 13 protein)	negative regulation of receptor internalization [GO:0002091]; P-body assembly [GO:0033962]; regulation of translation [GO:0006417]; RNA metabolic process [GO:0016070]; RNA transport [GO:0050658]; stress granule assembly [GO:0034063]	hit with GO BP
GN001287	Chromosome_1A	7004	9	98	32.50999428897773	0.5337916446324696	89.72602739726027	97	0.9587628865979382	81.46067415730337	17	0.7647058823529411	91.02112676056338	80	1	10.991075622357915	55	0.2545454545454545	methylated (>=50%)	Q9BXI6	TBC1 domain family member 10A (EBP50-PDX interactor of 64 kDa) (EPI64 protein) (Rab27A-GAP-alpha)	positive regulation of proteolysis [GO:0045862]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN005916	Chromosome_1A	3824	5	139	41.55334728033473	0.8420799153382825	0.9865255052935515	139	0	0.8995502248875562	136	0	3.2467532467532467	3	0	0.7799253984401492	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005917	Chromosome_1A	162	1	6	48.148148148148145	0.6497326203208557	0.7692307692307693	6	0	0.7692307692307693	6	0	NA	NA	NA	0.3430984428609132	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005918	Chromosome_1A	2057	3	83	41.954302382109866	0.9385878110191201	0.3403141361256545	83	0	0.38716814159292035	54	0	0.2982107355864811	29	0	0.5988023952095808	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005919	Chromosome_1A	1519	4	13	37.06385780118499	0.25125967019543977	29.98236331569665	13	0.15384615384615385	18.30065359477124	7	0	43.67816091954023	6	0.3333333333333333	5.555555555555555	35	0.02857142857142857	sparse (10-50%)	Q53HC5	Kelch-like protein 26	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN005920	Chromosome_1A	378	1	19	47.08994708994709	0.9140893470790378	0.36363636363636365	19	0	0.36363636363636365	19	0	NA	NA	NA	21.402660217654173	29	0.06896551724137931	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001292	Chromosome_1A	8208	9	280	37.93859649122807	0.9481939163498099	2.0951888256595965	270	0.003703703703703704	0.3203416978109984	50	0	2.437017994858612	220	0.004545454545454545	0.5574136008918618	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001293	Chromosome_1A	10062	16	277	35.967004571655735	0.85595909342178	0.5614400648260693	277	0	0.46357615894039733	66	0	0.5821701620256716	211	0	0.543267365153279	48	0	unmethylated (<10%)	A2BGA0	Transcription factor RFX4 (Regulatory factor X 4)	regulation of transcription by RNA polymerase II [GO:0006357]; ventral midline development [GO:0007418]	hit with GO BP
GN013292	Chromosome_1A	621	2	22	37.35909822866345	1.0325750132265135	35.08771929824562	22	0.2727272727272727	43.41317365269461	13	0.46153846153846156	25.59726962457338	9	0	79.31422147273749	25	0.92	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001294	Chromosome_1A	984	1	22	39.22764227642276	0.5830639948287007	25.82375478927203	22	0.2727272727272727	25.82375478927203	22	0.2727272727272727	NA	NA	NA	64.66165413533835	43	0.627906976744186	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011452	Chromosome_1A	318	1	10	42.76729559748428	0.6878650227125244	43.389830508474574	10	0.4	43.389830508474574	10	0.4	NA	NA	NA	37.18446601941748	70	0.42857142857142855	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001295	Chromosome_1A	22662	27	325	36.96055070161504	0.4227076568618088	90.63123681359411	318	0.9748427672955975	93.69076631464934	82	0.9634146341463414	89.81508234614273	236	0.9788135593220338	96.2304108428632	33	1	methylated (>=50%)	A0JN52	Splicing factor 3B subunit 3 (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130) (Spliceosome-associated protein 130) (SAP 130)	mRNA splicing, via spliceosome [GO:0000398]; negative regulation of protein catabolic process [GO:0042177]	hit with GO BP
GN001296	Chromosome_1A	547	2	4	39.48811700182815	0.18760181771413872	32.37410071942446	4	0	32.37410071942446	4	0	NA	NA	NA	46.532999164578115	15	0.5333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN005922	Chromosome_1A	28944	7	343	34.92606412382532	0.39090353764876046	72.65792610250298	342	0.7426900584795322	68.4873949579832	49	0.7755102040816326	73.19171820381823	293	0.7372013651877133	2.501136880400182	60	0	methylated (>=50%)	Q9NRH2	SNF-related serine/threonine-protein kinase (EC 2.7.11.1) (SNF1-related kinase)	myeloid cell differentiation [GO:0030099]; protein phosphorylation [GO:0006468]	hit with GO BP
GN005923	Chromosome_1A	14029	13	344	37.301304440801196	0.7049398621664812	0.6377352620936382	277	0	0.5436893203883495	57	0	0.6612856170378294	220	0	0.6301502666020359	61	0	unmethylated (<10%)	Q9XT77	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)	biotin import across plasma membrane [GO:1905135]; biotin transport [GO:0015878]; iodide transmembrane transport [GO:1904200]; pantothenate transmembrane transport [GO:0015887]	hit with GO BP
GN001283	Chromosome_1A	636	1	11	40.094339622641506	0.43329617242660723	0.2915451895043732	11	0	0.2915451895043732	11	0	NA	NA	NA	0.7554296506137866	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001282	Chromosome_1A	417	1	3	43.405275779376495	0.15312117503059974	2.803738317757009	3	0	2.803738317757009	3	0	NA	NA	NA	2.026098901098901	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001281	Chromosome_1A	573	1	14	40.139616055846425	0.6088342440801457	0.8426966292134831	14	0	0.8426966292134831	14	0	NA	NA	NA	0.8241758241758241	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005925	Chromosome_1A	546	1	16	43.040293040293044	0.6439628482972136	1.6556291390728477	16	0	1.6556291390728477	16	0	NA	NA	NA	0.8519003931847968	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001275	Chromosome_1A	425	2	5	40.23529411764706	0.29149519890260633	NA	0	NA	NA	NA	NA	NA	NA	NA	0.832639467110741	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005926	Chromosome_1A	425	2	5	40.23529411764706	0.29149519890260633	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN005927	Chromosome_1A	1380	2	28	36.81159420289855	0.5991533702377075	0.6696428571428571	28	0	0.723589001447178	14	0	0.6125574272588055	14	0	1.3888888888888888	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005928	Chromosome_1A	567	1	17	39.329805996472665	0.8295180722891566	0.5067567567567568	17	0	0.5067567567567568	17	0	NA	NA	NA	0.4296875	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005929	Chromosome_1A	255	1	4	53.333333333333336	0.22651565622918055	3.225806451612903	3	0	3.225806451612903	3	0	NA	NA	NA	3.163646821972965	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005930	Chromosome_1A	2384	6	25	38.21308724832215	0.28728429576785885	4.065040650406504	25	0	4.178272980501393	24	0	0	1	0	3.392568659127625	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005931	Chromosome_1A	210	1	9	40.476190476190474	1.0465116279069768	0.8888888888888888	9	0	0.8888888888888888	9	0	NA	NA	NA	2.0206022187004753	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005932	Chromosome_1A	1606	3	57	44.02241594022416	0.7336271838435646	0.5116279069767442	57	0	0.5181347150259067	30	0	0.5063291139240507	27	0	0.7230965546575925	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001276	Chromosome_1A	694	1	12	39.481268011527376	0.44608709625582516	0.823045267489712	12	0	0.823045267489712	12	0	NA	NA	NA	0.9482525060959089	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005933	Chromosome_1A	9507	5	271	37.172609656042916	0.8271680921559562	1.2105458596360936	266	0	1.1324470704086658	95	0	1.24428373923216	171	0	1.192394456977119	56	0	unmethylated (<10%)	Q9ET77	Junctophilin-3 (JP-3) (Junctophilin type 3)	exploration behavior [GO:0035640]; learning [GO:0007612]; locomotion [GO:0040011]; memory [GO:0007613]; neuromuscular process controlling balance [GO:0050885]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of ryanodine-sensitive calcium-release channel activity [GO:0060314]; regulation of synaptic plasticity [GO:0048167]	hit with GO BP
GN005934	Chromosome_1A	1002	1	0	42.21556886227545	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8190797398217297	68	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005935	Chromosome_1A	855	1	1	40.58479532163743	0.02995585453016607	3.4482758620689653	1	0	3.4482758620689653	1	0	NA	NA	NA	1.2971698113207548	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005936	Chromosome_1A	525	1	27	47.42857142857143	0.9770471464019851	0.5181347150259067	27	0	0.5181347150259067	27	0	NA	NA	NA	0.4792332268370607	77	0	unmethylated (<10%)	Q9ET80	Junctophilin-1 (JP-1) (Junctophilin type 1)	muscle organ development [GO:0007517]	hit with GO BP
GN005937	Chromosome_1A	1080	1	41	42.96296296296296	0.8232319476463151	0.39215686274509803	41	0	0.39215686274509803	41	0	NA	NA	NA	0.07639419404125286	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005938	Chromosome_1A	1062	1	33	38.70056497175141	0.8320512820512821	4.099462365591398	33	0	4.099462365591398	33	0	NA	NA	NA	1.243953006219765	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005939	Chromosome_1A	609	2	8	38.25944170771757	0.3613707165109034	89.77777777777777	8	1	88.23529411764706	6	1	92.54658385093168	2	1	93.34710743801652	32	1	methylated (>=50%)	A9JR78	Tonsoku-like protein (NF-kappa-B inhibitor-like protein 2) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2)	double-strand break repair via homologous recombination [GO:0000724]; replication fork processing [GO:0031297]	hit with GO BP
GN001263	Chromosome_1A	21708	8	423	35.9314538419016	0.6046441890744275	92.26050023596036	420	0.9904761904761905	96.05263157894737	23	1	92.06234004354636	397	0.9899244332493703	85.49967341606794	27	0.9259259259259259	methylated (>=50%)	Q0P5G1	Tonsoku-like protein (Inhibitor of kappa B-related protein) (I-kappa-B-related protein) (IkappaBR) (NF-kappa-B inhibitor-like protein 2) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2)	double-strand break repair via homologous recombination [GO:0000724]; replication fork processing [GO:0031297]	hit with GO BP
GN005940	Chromosome_1A	1692	2	8	37.70685579196218	0.13473348927487186	72.51908396946565	8	1	74.8407643312102	7	1	63.29113924050633	1	1	90.9090909090909	19	1	methylated (>=50%)	Q5R8P3	BBSome complex assembly protein BBS10 (Bardet-Biedl syndrome 10 protein homolog)	chaperone-mediated protein complex assembly [GO:0051131]	hit with GO BP
GN005941	Chromosome_1A	2305	6	53	37.44034707158352	0.6576071743858063	0.4604758250191865	53	0	0.5286343612334802	25	0	0.4078857919782461	28	0	1.4973958333333333	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005942	Chromosome_1A	11984	10	345	37.37483311081442	0.824470408059489	1.2797933544675355	342	0	1.3736263736263736	106	0	1.2509593246354567	236	0	2.322028719828903	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005943	Chromosome_1A	291	1	11	49.48453608247423	0.6233690360272639	88.02228412256268	11	1	88.02228412256268	11	1	NA	NA	NA	89.02095714732562	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005944	Chromosome_1A	1962	2	34	35.321100917431195	0.5560297402727303	91.2781954887218	34	1	94.64480874316939	14	1	88.42592592592592	20	1	91.53543307086615	24	0.9583333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005945	Chromosome_1A	12883	10	281	35.4342932546767	0.6965592680603793	95.730140787175	275	0.9963636363636363	96.48760330578513	65	1	95.59729435922213	210	0.9952380952380953	95.55815312682641	21	1	methylated (>=50%)	Q9HCD5	Nuclear receptor coactivator 5 (NCoA-5) (Coactivator independent of AF-2) (CIA)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN001260	Chromosome_1A	1059	1	36	44.38149197355996	0.6913535470767446	0.30432136335970783	36	0	0.30432136335970783	36	0	NA	NA	NA	21.39673105497771	21	0.3333333333333333	unmethylated (<10%)	Q5UR67	N-glycosidase R617 (EC 3.2.2.-) (Riboflavin biosynthesis intermediates N-glycosidase)	NA	hit, no GO BP
GN001259	Chromosome_1A	9851	9	124	35.81362298243833	0.3935834432058812	82.12223291626565	124	0.9274193548387096	88.78842676311031	24	0.9583333333333334	81.09908409658618	100	0.92	43.391988019468364	44	0.45454545454545453	methylated (>=50%)	Q28DH9	Centrosomal protein of 76 kDa (Cep76)	regulation of centriole replication [GO:0046599]	hit with GO BP
GN005947	Chromosome_1A	951	1	9	43.007360672975814	0.21178304547928936	86.69950738916256	8	1	86.69950738916256	8	1	NA	NA	NA	94.44444444444444	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005948	Chromosome_1A	901	3	24	38.95671476137625	0.7160264900662252	0.9331259720062208	17	0	0.9478672985781991	16	0	0	1	0	11.533052039381154	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005949	Chromosome_1A	1150	2	37	38.95652173913044	0.8480318883906328	7.428170988086896	37	0	7.867820613690008	34	0	3.8461538461538463	3	0	1.1899313501144164	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005950	Chromosome_1A	972	1	27	41.97530864197531	0.6355710549258936	54.85625485625486	27	0.4444444444444444	54.85625485625486	27	0.4444444444444444	NA	NA	NA	71.13055181695827	52	0.4807692307692308	methylated (>=50%)	P67827	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)	intermediate filament cytoskeleton organization [GO:0045104]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; peptidyl-serine phosphorylation [GO:0018105]; protein phosphorylation [GO:0006468]	hit with GO BP
GN005951	Chromosome_1A	19554	15	302	36.48869796461082	0.47131324566167015	83.21978299268231	279	0.953405017921147	94.17512213453588	48	1	81.00977939504207	231	0.9437229437229437	74.16086130462318	31	0.8387096774193549	methylated (>=50%)	O35231	Kinesin-like protein KIFC3	epithelial cell-cell adhesion [GO:0090136]; Golgi organization [GO:0007030]; microtubule-based movement [GO:0007018]; microtubule-based process [GO:0007017]; zonula adherens maintenance [GO:0045218]	hit with GO BP
GN005952	Chromosome_1A	24160	3	192	43.5885761589404	0.192643473855137	82.36119775421085	183	0.8907103825136612	76.55417406749557	16	1	82.6278443846342	167	0.8802395209580839	30.344827586206897	8	0.25	methylated (>=50%)	Q3U145	Transmembrane protein 64	negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of bone resorption [GO:0045780]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of osteoclast differentiation [GO:0045672]; regulation of ATP-dependent activity [GO:0043462]; regulation of cytosolic calcium ion concentration [GO:0051480]	hit with GO BP
GN005953	Chromosome_1A	270	1	10	43.7037037037037	0.7941176470588235	0	10	0	0	10	0	NA	NA	NA	0.8873720136518771	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005954	Chromosome_1A	231	1	10	40.692640692640694	1.11864406779661	1.0243277848911652	10	0	1.0243277848911652	10	0	NA	NA	NA	0.6619593998234775	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005955	Chromosome_1A	405	1	18	40.74074074074074	1.0922984716811508	0.38022813688212925	18	0	0.38022813688212925	18	0	NA	NA	NA	0.6607201850016517	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001252	Chromosome_1A	231	1	9	41.125541125541126	0.99	0.6015037593984962	9	0	0.6015037593984962	9	0	NA	NA	NA	1.7891373801916932	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001251	Chromosome_1A	406	1	14	40.39408866995074	0.8638297872340426	0.6600660066006601	14	0	0.6600660066006601	14	0	NA	NA	NA	0.7385524372230429	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005956	Chromosome_1A	405	1	12	40.24691358024691	0.7523219814241486	0	12	0	0	12	0	NA	NA	NA	0.6382978723404256	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005957	Chromosome_1A	2951	2	97	38.42765164351067	0.8904785458527374	2.849069931716506	97	0	0.6769825918762089	38	0	3.5480859010270773	59	0	0.5117998294000569	56	0	unmethylated (<10%)	Q3SZD7	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005958	Chromosome_1A	2399	2	76	35.93163818257607	0.9820263814155907	0.6933501418216199	75	0	0.9313154831199069	36	0	0.6050129645635264	39	0	0.8154389779831476	58	0	unmethylated (<10%)	Q3SZD7	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005959	Chromosome_1A	2290	2	68	35.50218340611354	0.9426949015049702	0.35765379113018597	67	0	0.43132050431320507	54	0	0.1694915254237288	13	0	0.7425742574257426	8	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN005960	Chromosome_1A	870	1	8	39.88505747126437	0.23516691444789836	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7547169811320755	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005961	Chromosome_1A	1917	1	65	39.280125195618155	0.8800036724201249	2.5689819219790677	18	0	2.5689819219790677	18	0	NA	NA	NA	1.392757660167131	33	0	unmethylated (<10%)	P0AFQ9	Uncharacterized metal-dependent hydrolase YcfH (EC 3.1.-.-)	NA	hit, no GO BP
GN001246	Chromosome_1A	522	1	18	43.67816091954023	0.7230473258945749	0	6	0	0	6	0	NA	NA	NA	0.5494505494505495	36	0	unmethylated (<10%)	P47727	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	epithelial cell differentiation [GO:0030855]; glucocorticoid metabolic process [GO:0008211]; ovulation from ovarian follicle [GO:0001542]; phylloquinone catabolic process [GO:0042376]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; prostaglandin catabolic process [GO:1905344]; response to estradiol [GO:0032355]; response to gonadotropin [GO:0034698]; response to lipopolysaccharide [GO:0032496]; response to progesterone [GO:0032570]; response to testosterone [GO:0033574]; steroid catabolic process [GO:0006706]; vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN001245	Chromosome_1A	522	1	18	43.86973180076628	0.7168141592920354	1.2820512820512822	6	0	1.2820512820512822	6	0	NA	NA	NA	0.5263157894736842	20	0	unmethylated (<10%)	P47727	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	epithelial cell differentiation [GO:0030855]; glucocorticoid metabolic process [GO:0008211]; ovulation from ovarian follicle [GO:0001542]; phylloquinone catabolic process [GO:0042376]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; prostaglandin catabolic process [GO:1905344]; response to estradiol [GO:0032355]; response to gonadotropin [GO:0034698]; response to lipopolysaccharide [GO:0032496]; response to progesterone [GO:0032570]; response to testosterone [GO:0033574]; steroid catabolic process [GO:0006706]; vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005963	Chromosome_1A	983	2	33	41.40386571719227	0.7862856311809191	1.1074197120708749	33	0	1.2016021361815754	29	0	0.6493506493506493	4	0	0.7415858528237308	41	0	unmethylated (<10%)	Q3SZD7	Carbonyl reductase [NADPH] 1 (EC 1.1.1.184) (15-hydroxyprostaglandin dehydrogenase [NADP(+)]) (EC 1.1.1.196, EC 1.1.1.197) (20-beta-hydroxysteroid dehydrogenase) (Alcohol dehydrogenase [NAD(P)+] CBR1) (EC 1.1.1.71) (NADPH-dependent carbonyl reductase 1) (Prostaglandin 9-ketoreductase) (PG-9-KR) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189)	vitamin K metabolic process [GO:0042373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005964	Chromosome_1A	1287	1	49	40.87024087024087	0.9322226821192053	0.2298095863427446	49	0	0.2298095863427446	49	0	NA	NA	NA	1.6498993963782695	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005965	Chromosome_1A	1290	1	46	41.16279069767442	0.8473753355800537	0.4826254826254826	27	0	0.4826254826254826	27	0	NA	NA	NA	0.3	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005966	Chromosome_1A	837	1	23	43.01075268817204	0.6040287408615983	0.12919896640826872	23	0	0.12919896640826872	23	0	NA	NA	NA	1.0005265929436546	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005967	Chromosome_1A	968	3	25	42.35537190082645	0.5769597558649628	2.3255813953488373	3	0	2.7777777777777777	2	0	2	1	0	0.8325624421831638	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005968	Chromosome_1A	897	1	31	42.14046822742475	0.7787984876067777	0.48721071863581	31	0	0.48721071863581	31	0	NA	NA	NA	0.5923532579429187	62	0	unmethylated (<10%)	O16374	Beta-1,4-galactosyltransferase galt-1 (EC 2.4.1.-)	carbohydrate derivative biosynthetic process [GO:1901137]; N-glycan processing [GO:0006491]	hit with GO BP
GN005969	Chromosome_1A	9478	16	253	37.46571006541465	0.7612851405622489	1.772424598511555	253	0	1.9094488188976377	160	0	1.636788776305534	93	0	0.5340453938584779	56	0	unmethylated (<10%)	Q05858	Formin (Limb deformity protein)	actin nucleation [GO:0045010]; formin-nucleated actin cable assembly [GO:0070649]	hit with GO BP
GN005970	Chromosome_1A	795	1	19	40.62893081761006	0.5868298368298368	0.14184397163120568	19	0	0.14184397163120568	19	0	NA	NA	NA	0.4148053605615826	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005971	Chromosome_1A	1290	1	47	40.93023255813954	0.8754602555772146	0.2764976958525346	33	0	0.2764976958525346	33	0	NA	NA	NA	0.4090909090909091	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005972	Chromosome_1A	1290	1	36	44.96124031007752	0.5556951574110637	19.183359013867488	32	0.09375	19.183359013867488	32	0.09375	NA	NA	NA	2.0066889632107023	35	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN005973	Chromosome_1A	1320	1	34	44.77272727272727	0.5153881488286634	7.065868263473054	28	0	7.065868263473054	28	0	NA	NA	NA	1.999000499750125	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005974	Chromosome_1A	1068	1	50	42.69662921348315	1.027258911567243	0.7503751875937968	50	0	0.7503751875937968	50	0	NA	NA	NA	0.8173076923076923	45	0	unmethylated (<10%)	Q03041	Cyclic nucleotide-gated channel alpha-2 (CNG channel alpha-2) (CNG-2) (CNG2) (Cyclic nucleotide-gated channel alpha 3) (CNCalpha3) (CNGa3) (Olfactory cyclic nucleotide-gated channel subunit 1) (OCNC1)	calcium ion transport [GO:0006816]; monoatomic cation transmembrane transport [GO:0098655]; potassium ion transport [GO:0006813]; response to hydrogen sulfide [GO:1904880]; sensory perception of chemical stimulus [GO:0007606]; sensory perception of smell [GO:0007608]; sodium ion transport [GO:0006814]	hit with GO BP
GN001230	Chromosome_1A	11522	8	373	36.98142683561882	0.9481872235275949	0.6165460836741113	363	0	0.5747126436781609	46	0	0.6216884493111975	317	0	0.4807692307692308	43	0	unmethylated (<10%)	Q96EQ9	Histone-lysine N-methyltransferase PRDM9 (Hybrid sterility protein 1) (Meiosis-induced factor containing a PR/SET domain and zinc-finger motif) (PR domain zinc finger protein 9) (PR domain-containing protein 9) (Protein-lysine N-methyltransferase PRDM9) (EC 2.1.1.-) ([histone H3]-lysine36 N-trimethyltransferase PRDM9) (EC 2.1.1.359) ([histone H3]-lysine4 N-trimethyltransferase PRDM9) (EC 2.1.1.354) ([histone H3]-lysine9 N-trimethyltransferase PRDM9) (EC 2.1.1.355) ([histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.362) ([histone H4]-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.361)	double-strand break repair involved in meiotic recombination [GO:1990918]; female gamete generation [GO:0007292]; homologous chromosome pairing at meiosis [GO:0007129]; male gamete generation [GO:0048232]; meiotic gene conversion [GO:0006311]; negative regulation of apoptotic process [GO:0043066]; positive regulation of fertilization [GO:1905516]; positive regulation of meiosis I [GO:0060903]; positive regulation of reciprocal meiotic recombination [GO:0010845]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; spermatogenesis [GO:0007283]	hit with GO BP
GN001229	Chromosome_1A	5890	9	64	34.14261460101868	0.3742021302996913	73.43457457873934	64	0.890625	79.90635973468592	35	0.9142857142857143	66.0427807486631	29	0.8620689655172413	49.45244956772334	23	0.5652173913043478	methylated (>=50%)	Q2TA16	Dynein regulatory complex subunit 2 (Coiled-coil domain-containing protein 65)	axonemal dynein complex assembly [GO:0070286]; cilium-dependent cell motility [GO:0060285]; regulation of cilium movement [GO:0003352]	hit with GO BP
GN005976	Chromosome_1A	4830	5	141	36.56314699792961	0.8734636502502922	3.7531987489337504	141	0	0.5	35	0	4.422351731230717	106	0	0.4380475594493116	66	0	unmethylated (<10%)	P91953	50 kDa hatching enzyme (HE) (HEZ) (EC 3.4.24.12) (Envelysin) (Sea-urchin-hatching proteinase) [Cleaved into: 38 kDa hatching enzyme; 32 kDa hatching enzyme non-specific; 15 kDa peptide]	collagen catabolic process [GO:0030574]; extracellular matrix organization [GO:0030198]; proteolysis [GO:0006508]	hit with GO BP
GN005977	Chromosome_1A	7760	11	85	35.01288659793814	0.3612144604071494	84.09213604462839	85	0.9176470588235294	93.61126150514347	28	1	79.35309973045823	57	0.8771929824561403	87.98568507157464	26	1	methylated (>=50%)	Q5RDE7	Cysteine desulfurase (EC 2.8.1.7)	[2Fe-2S] cluster assembly [GO:0044571]; [4Fe-4S] cluster assembly [GO:0044572]	hit with GO BP
GN005978	Chromosome_1A	9610	11	134	35.33818938605619	0.44681420989518567	81.54398563734291	134	0.8656716417910447	71.49863760217984	39	0.8205128205128205	84.37116564417178	95	0.8842105263157894	37.96358732299393	24	0.4583333333333333	methylated (>=50%)	Q969N2	GPI-anchor transamidase component PIGT (Phosphatidylinositol-glycan biosynthesis class T protein)	attachment of GPI anchor to protein [GO:0016255]; GPI anchor biosynthetic process [GO:0006506]; GPI anchored protein biosynthesis [GO:0180046]	hit with GO BP
GN005979	Chromosome_1A	35540	14	390	35.520540236353405	0.3496960538659988	79.9267769221058	388	0.8943298969072165	88.93195521102498	84	1	77.73942151786181	304	0.8651315789473685	21.96861626248217	11	0.18181818181818182	methylated (>=50%)	P07686	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]	astrocyte cell migration [GO:0043615]; carbohydrate metabolic process [GO:0005975]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]; hyaluronan catabolic process [GO:0030214]; N-acetylglucosamine metabolic process [GO:0006044]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; single fertilization [GO:0007338]	hit with GO BP
GN005980	Chromosome_1A	1515	1	24	41.18811881188119	0.3736588975212727	88.34134615384616	24	0.9583333333333334	88.34134615384616	24	0.9583333333333334	NA	NA	NA	87.16119828815977	21	0.9523809523809523	methylated (>=50%)	Q6GLJ1	BTB/POZ domain-containing protein 17	NA	hit, no GO BP
GN005981	Chromosome_1A	776	4	10	36.597938144329895	0.3863964547129413	96.71052631578948	10	1	96.15384615384616	5	1	97.1264367816092	5	1	93.6864633493847	26	1	methylated (>=50%)	Q6DE14	Transcription factor E2F4 (E2F-4)	centriole assembly [GO:0098534]; motile cilium assembly [GO:0044458]; multi-ciliated epithelial cell differentiation [GO:1903251]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN005982	Chromosome_1A	1962	4	81	39.04179408766565	1.083401505235602	0.5367686527106817	81	0	0.5446623093681917	30	0	0.5341880341880342	51	0	0.5453306066803	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005983	Chromosome_1A	273	1	5	44.32234432234432	0.3735632183908046	0	5	0	0	5	0	NA	NA	NA	0.7973421926910299	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001216	Chromosome_1A	600	1	9	39.333333333333336	0.390625	0	1	0	0	1	0	NA	NA	NA	0.9316770186335404	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001217	Chromosome_1A	771	1	13	50.19455252918288	0.28485761382367986	3.0303030303030303	3	0	3.0303030303030303	3	0	NA	NA	NA	1.5051740357478833	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005985	Chromosome_1A	18191	7	362	35.45709416744544	0.6332110241537151	0.9450622881962675	356	0	0.8810572687224669	41	0	0.9511366605696367	315	0	5.5876685934489405	31	0	unmethylated (<10%)	P86856	Nacrein-like protein	one-carbon metabolic process [GO:0006730]	hit with GO BP
GN001218	Chromosome_1A	65962	11	1234	35.22331039083109	0.6031556028981189	8.035930398300298	811	0.1060419235511714	0.2874743326488706	52	0	8.57891101646138	759	0.11330698287220026	1.5781370284834488	46	0	unmethylated (<10%)	Q6NT55	Ultra-long-chain fatty acid omega-hydroxylase (EC 1.14.14.177) (Cytochrome P450 4F22)	ceramide biosynthetic process [GO:0046513]; icosanoid metabolic process [GO:0006690]	hit with GO BP
GN001219	Chromosome_1A	8346	10	156	34.95087467050084	0.6224517017340045	1.4866504854368932	148	0	0.9242957746478874	47	0	1.7824074074074074	101	0	0.9829619921363041	45	0	unmethylated (<10%)	P78329	Cytochrome P450 4F2 (EC 1.14.14.1) (20-hydroxyeicosatetraenoic acid synthase) (20-HETE synthase) (Arachidonic acid omega-hydroxylase) (CYPIVF2) (Cytochrome P450-LTB-omega) (Docosahexaenoic acid omega-hydroxylase) (EC 1.14.14.79) (Leukotriene-B(4) 20-monooxygenase 1) (Leukotriene-B(4) omega-hydroxylase 1) (EC 1.14.14.94) (Phylloquinone omega-hydroxylase CYP4F2) (EC 1.14.14.78)	arachidonate metabolic process [GO:0019369]; blood coagulation [GO:0007596]; epoxygenase P450 pathway [GO:0019373]; fatty acid omega-oxidation [GO:0010430]; icosanoid metabolic process [GO:0006690]; leukotriene B4 catabolic process [GO:0036101]; leukotriene metabolic process [GO:0006691]; long-chain fatty acid metabolic process [GO:0001676]; menaquinone catabolic process [GO:0042361]; negative regulation of icosanoid secretion [GO:0032304]; omega-hydroxylase P450 pathway [GO:0097267]; phylloquinone catabolic process [GO:0042376]; positive regulation of icosanoid secretion [GO:0032305]; pressure natriuresis [GO:0003095]; regulation of blood pressure [GO:0008217]; renal water homeostasis [GO:0003091]; sodium ion homeostasis [GO:0055078]; very long-chain fatty acid metabolic process [GO:0000038]; vitamin E metabolic process [GO:0042360]; vitamin K catabolic process [GO:0042377]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN005986	Chromosome_1A	528	1	10	39.39393939393939	0.4947526236881559	100	3	1	100	3	1	NA	NA	NA	94.51219512195122	47	1	NA	NA	NA	NA	no Swiss-Prot hit
GN005987	Chromosome_1A	567	1	8	38.62433862433863	0.3825265643447462	89.36170212765957	4	1	89.36170212765957	4	1	NA	NA	NA	91.95906432748538	44	1	NA	NA	NA	NA	no Swiss-Prot hit
GN001215	Chromosome_1A	726	1	15	48.209366391184574	0.3618421052631579	91.42212189616252	15	1	91.42212189616252	15	1	NA	NA	NA	91.51119402985074	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005988	Chromosome_1A	18939	16	214	33.84022387665664	0.39526228971970817	85.88074957410562	212	0.9433962264150944	75.27950310559007	38	0.8421052631578947	87.96900489396411	174	0.9655172413793104	9.916201117318435	22	0.09090909090909091	methylated (>=50%)	Q63615	Vacuolar protein sorting-associated protein 33A (r-vps33a)	autophagosome maturation [GO:0097352]; autophagosome-lysosome fusion [GO:0061909]; developmental pigmentation [GO:0048066]; endosome to lysosome transport [GO:0008333]; lysosome localization [GO:0032418]; melanosome localization [GO:0032400]; pigmentation [GO:0043473]; platelet formation [GO:0030220]; regulation of developmental pigmentation [GO:0048070]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN001196	Chromosome_1A	2166	7	15	34.94921514312096	0.22745411013567438	88.47874720357942	15	1	86.73139158576052	11	1	92.3913043478261	4	1	30.116472545757073	27	0.14814814814814814	methylated (>=50%)	Q9WVR6	Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (Solute carrier family 7 member 8)	amino acid import across plasma membrane [GO:0089718]; amino acid transmembrane transport [GO:0003333]; amino acid transport [GO:0006865]; glycine transport [GO:0015816]; L-alanine import across plasma membrane [GO:1904273]; L-amino acid transport [GO:0015807]; L-leucine import across plasma membrane [GO:1903801]; L-leucine transport [GO:0015820]; neutral amino acid transport [GO:0015804]; proline transmembrane transport [GO:0035524]; thyroid hormone transport [GO:0070327]; tryptophan transport [GO:0015827]; valine transport [GO:0015829]	hit with GO BP
GN001197	Chromosome_1A	345	1	14	42.028985507246375	0.9349593495934959	26.18101545253863	12	0	26.18101545253863	12	0	NA	NA	NA	50.94152626362735	17	0.6470588235294118	sparse (10-50%)	P50729	Probable ATP-dependent DNA helicase RecS (EC 5.6.2.4) (Probable DNA 3'-5' helicase RecS) (Recombination protein S)	DNA recombination [GO:0006310]	hit with GO BP
GN001198	Chromosome_1A	7291	8	99	34.892333013304075	0.44686308256153734	81.11642294713161	97	0.7938144329896907	75.98039215686275	17	0.7058823529411765	81.9763624425476	80	0.8125	56.75939482674475	26	0.5769230769230769	methylated (>=50%)	Q3UMM4	Cyclin-dependent kinase 10 (EC 2.7.11.22) (Cell division protein kinase 10)	G2/M transition of mitotic cell cycle [GO:0000086]; negative regulation of cilium assembly [GO:1902018]; peptidyl-threonine phosphorylation [GO:0018107]; positive regulation of MAPK cascade [GO:0043410]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell cycle G2/M phase transition [GO:1902749]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN001199	Chromosome_1A	2690	5	36	34.94423791821561	0.4399498446273783	86.5100087032202	36	0.9722222222222222	95.47218628719276	14	1	81.9672131147541	22	0.9545454545454546	87.87878787878788	16	1	methylated (>=50%)	Q95L73	Cytochrome b-245 light chain (Cytochrome b(558) alpha chain) (Cytochrome b558 subunit alpha) (Neutrophil cytochrome b 22 kDa polypeptide) (Superoxide-generating NADPH oxidase light chain subunit) (p22 phagocyte B-cytochrome) (p22-phox) (p22phox)	innate immune response [GO:0045087]	hit with GO BP
GN005990	Chromosome_1A	29161	27	334	36.085868111518806	0.35599822683914634	88.7251234475535	240	0.9791666666666666	86.82972718720602	40	1	89.08362989323844	200	0.975	86.22448979591837	24	1	methylated (>=50%)	O95427	GPI ethanolamine phosphate transferase 1 (EC 2.-.-.-) (GPI-ethanolamine transferase I) (GPI-ETI) (MCD4 homolog) (Phosphatidylinositol-glycan biosynthesis class N protein) (PIG-N)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN005991	Chromosome_1A	5849	5	66	33.133869037442295	0.4115501066098081	82.40660295395308	66	0.9242424242424242	87.03939008894537	11	1	81.45140162431228	55	0.9090909090909091	77.59433962264151	13	0.7692307692307693	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005992	Chromosome_1A	2137	2	34	44.92278895648105	0.31570668798665186	94.57928802588997	34	1	95.29411764705883	29	1	92.35880398671097	5	1	92.33543733092877	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005993	Chromosome_1A	5104	3	77	37.774294670846395	0.42490107466430255	91.89563611175248	77	1	96.25638116846285	43	1	88.90186915887851	34	1	21.606425702811244	46	0.30434782608695654	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001203	Chromosome_1A	319	2	1	36.677115987460816	0.09477124183006536	90.74074074074075	1	1	90.74074074074075	1	1	NA	NA	NA	85.07381082558776	25	0.92	NA	NA	NA	NA	no Swiss-Prot hit
GN001204	Chromosome_1A	1239	1	21	42.3728813559322	0.3776342525399129	86.81318681318682	21	1	86.81318681318682	21	1	NA	NA	NA	59.1044776119403	7	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN005995	Chromosome_1A	1413	1	51	44.939844302901626	0.7168022758469771	1.1164274322169059	51	0	1.1164274322169059	51	0	NA	NA	NA	0.7299270072992701	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005996	Chromosome_1A	46309	34	500	35.82672914552247	0.3398383212343582	84.64516129032258	493	0.9574036511156186	89.8284802552852	181	0.994475138121547	82.80230689231351	312	0.9358974358974359	49.36708860759494	38	0.631578947368421	methylated (>=50%)	F4JTS8	Protein NO VEIN (Protein EMBRYO DEFECTIVE 2597)	auxin polar transport [GO:0009926]; cell fate specification [GO:0001708]; embryo development ending in seed dormancy [GO:0009793]; leaf vascular tissue pattern formation [GO:0010305]; root development [GO:0048364]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN001206	Chromosome_1A	45874	34	561	36.31250817456511	0.3771168990387659	79.29889080016608	560	0.9267857142857143	80.59054584857104	178	0.9438202247191011	78.93677615340802	382	0.918848167539267	47.53363228699551	14	0.42857142857142855	methylated (>=50%)	F4JTS8	Protein NO VEIN (Protein EMBRYO DEFECTIVE 2597)	auxin polar transport [GO:0009926]; cell fate specification [GO:0001708]; embryo development ending in seed dormancy [GO:0009793]; leaf vascular tissue pattern formation [GO:0010305]; root development [GO:0048364]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN001207	Chromosome_1A	2607	2	33	46.029919447640964	0.24697705663497313	1.046337817638266	30	0	1.1857707509881423	11	0	0.9615384615384616	19	0	0.4694835680751174	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001208	Chromosome_1A	639	1	16	47.57433489827856	0.47724408346170005	0.9523809523809523	14	0	0.9523809523809523	14	0	NA	NA	NA	0.7253544345532477	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001209	Chromosome_1A	1128	1	52	41.666666666666664	1.062127659574468	0.5125284738041003	52	0	0.5125284738041003	52	0	NA	NA	NA	0.46828437633035336	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005998	Chromosome_1A	7025	2	33	38.704626334519574	0.13621268509824705	0.8255933952528379	33	0	0.8255933952528379	33	0	NA	NA	NA	0.5681818181818182	64	0	unmethylated (<10%)	Q5PPM5	Transcription factor HES-1 (Hairy and enhancer of split 1) (Protein hairy-1)	anterior/posterior pattern specification [GO:0009952]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of muscle organ development [GO:0048635]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of transcription by RNA polymerase II [GO:0000122]; Notch signaling pathway [GO:0007219]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN005999	Chromosome_1A	2187	4	60	36.39689071787837	0.8391152264690271	0.5846243788365975	60	0	0.3779697624190065	37	0	0.82855321861058	23	0	0.6542699724517906	55	0	unmethylated (<10%)	Q3ZBG4	Transcription factor HES-1 (Hairy and enhancer of split 1)	anterior/posterior pattern specification [GO:0009952]; forebrain radial glial cell differentiation [GO:0021861]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of forebrain neuron differentiation [GO:2000978]; negative regulation of glial cell proliferation [GO:0060253]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of oligodendrocyte differentiation [GO:0048715]; negative regulation of pro-B cell differentiation [GO:2000974]; negative regulation of transcription by RNA polymerase II [GO:0000122]; Notch signaling pathway [GO:0007219]; positive regulation of astrocyte differentiation [GO:0048711]; positive regulation of DNA binding [GO:0043388]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; protein-containing complex assembly [GO:0065003]; regulation of neurogenesis [GO:0050767]; regulation of receptor signaling pathway via JAK-STAT [GO:0046425]	hit with GO BP
GN001194	Chromosome_1A	249	1	6	44.17670682730924	0.49404761904761907	0.6896551724137931	6	0	0.6896551724137931	6	0	NA	NA	NA	9.070673344462994	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006000	Chromosome_1A	750	1	30	38.8	1.088850174216028	0.24213075060532688	30	0	0.24213075060532688	30	0	NA	NA	NA	0.5737704918032787	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006001	Chromosome_1A	10399	7	252	33.945571689585535	0.8417297591068481	0.4832474226804124	251	0	0.6134969325153374	23	0	0.4679625629949604	228	0	0.3897116134060795	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006002	Chromosome_1A	659	2	25	39.30197268588771	0.9866451071984669	0.6069802731411229	25	0	0.6896551724137931	19	0	0.44642857142857145	6	0	0.3829787234042553	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001191	Chromosome_1A	6820	4	78	33.651026392961874	0.40652133709724997	76.8348075543868	76	0.7763157894736842	58.597502401536985	29	0.5862068965517241	82.87714831317632	47	0.8936170212765957	0.7049891540130152	56	0	methylated (>=50%)	Q28F51	TAR DNA-binding protein 43 (TDP-43)	regulation of circadian rhythm [GO:0042752]; regulation of gene expression [GO:0010468]; regulation of protein stability [GO:0031647]; RNA splicing [GO:0008380]	hit with GO BP
GN001177	Chromosome_1A	4922	5	74	35.900040633888665	0.4666705958625567	68.4931506849315	74	0.7972972972972973	60.204081632653065	13	0.6153846153846154	70.46004842615012	61	0.8360655737704918	61.269614835948644	45	0.6888888888888889	methylated (>=50%)	Q8BN57	Mitochondrial inner membrane subdomain organizer 1	negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of mitochondrial fusion [GO:0010637]; positive regulation of mitochondrial fission [GO:0090141]	hit with GO BP
GN001178	Chromosome_1A	13621	7	197	35.65083327215329	0.4559171738384322	81.78830617554429	197	0.9289340101522843	85.25345622119816	36	0.9166666666666666	81.18366034094564	161	0.9316770186335404	30.52536231884058	48	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006005	Chromosome_1A	1677	1	41	42.098986285032794	0.5518926989019457	4.137931034482759	11	0	4.137931034482759	11	0	NA	NA	NA	1.7410228509249184	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001180	Chromosome_1A	255	1	11	58.431372549019606	0.5081521739130435	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1899515204936095	63	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006006	Chromosome_1A	267	1	6	53.558052434456926	0.3333333333333333	0	3	0	0	3	0	NA	NA	NA	0.8633093525179856	66	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001181	Chromosome_1A	231	1	5	54.112554112554115	0.29615384615384616	0	2	0	0	2	0	NA	NA	NA	0.8860011813349085	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001182	Chromosome_1A	906	1	30	38.63134657836645	0.90311004784689	0.922266139657444	30	0	0.922266139657444	30	0	NA	NA	NA	1.1176857330703485	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001183	Chromosome_1A	255	1	11	59.6078431372549	0.4877412623891497	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0116337885685383	64	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006008	Chromosome_1A	267	1	5	54.6816479400749	0.26871980676328505	0	5	0	0	5	0	NA	NA	NA	1.4150943396226414	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001184	Chromosome_1A	231	1	5	54.112554112554115	0.2966101694915254	0	5	0	0	5	0	NA	NA	NA	0.6607929515418502	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006007	Chromosome_1A	876	1	31	38.013698630136986	0.9994847258005153	0.26824034334763946	31	0	0.26824034334763946	31	0	NA	NA	NA	0.3988035892323031	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006009	Chromosome_1A	312	1	8	40.705128205128204	0.623688155922039	0.7142857142857143	8	0	0.7142857142857143	8	0	NA	NA	NA	0.8159564823209429	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006010	Chromosome_1A	879	1	33	37.8839590443686	1.075687903285619	0.7681879801174876	33	0	0.7681879801174876	33	0	NA	NA	NA	1.0798303123794832	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001186	Chromosome_1A	8871	7	149	33.243151843084206	0.6225116563839307	83.7772397094431	149	0.8926174496644296	35.810810810810814	14	0.42857142857142855	87.48043818466354	135	0.9407407407407408	0.837898807605543	49	0	methylated (>=50%)	A1A4J8	Cytochrome c oxidase assembly factor SCO1	mitochondrial respiratory chain complex IV assembly [GO:0033617]	hit with GO BP
GN001187	Chromosome_1A	4603	8	95	35.0858135998262	0.6707174914029259	0.759631036353771	95	0	1.1782032400589102	29	0	0.6233517142172141	66	0	0.4940982706560527	48	0	unmethylated (<10%)	A1BQQ5	Cysteine-rich venom protein Mr30 (CRVP) (Cysteine-rich secretory protein Mr30) (GlaCrisp form 1/2/3) (Mr30-1/2)	NA	hit, no GO BP
GN006012	Chromosome_1A	5710	8	138	35.569176882662	0.7642248352219606	0.7304347826086957	115	0	0.7295719844357976	50	0	0.7309149972929074	65	0	0.5011693952555963	54	0	unmethylated (<10%)	A1BQQ5	Cysteine-rich venom protein Mr30 (CRVP) (Cysteine-rich secretory protein Mr30) (GlaCrisp form 1/2/3) (Mr30-1/2)	NA	hit, no GO BP
GN006013	Chromosome_1A	5870	10	183	36.98466780238501	0.9116531303307279	0.7915831663326653	182	0	0.7367990176013098	51	0	0.8093405864402282	131	0	0.7869589657110736	43	0	unmethylated (<10%)	Q7YT83	Cysteine-rich venom protein (CRVP) (EC 3.4.-.-) (Substrate-specific endoprotease Tex31)	NA	hit, no GO BP
GN006014	Chromosome_1A	2347	4	78	38.09118023008095	0.9162462462462463	1.2403100775193798	78	0	0.4884004884004884	29	0	1.4962593516209477	49	0	0.36063884595569295	60	0	unmethylated (<10%)	Q5UCA8	Bryoporin (PpBP) (Physcomitrin)	cytolysis in another organism [GO:0051715]; monoatomic cation transport [GO:0006812]; pore complex assembly [GO:0046931]	hit with GO BP
GN006015	Chromosome_1A	1687	3	53	36.87018375815056	0.9258001387493917	0.8440243079000675	53	0	0.694980694980695	26	0	0.9598080383923215	27	0	0.8395061728395061	57	0	unmethylated (<10%)	P04988	Cysteine proteinase 1 (EC 3.4.22.-)	hyperosmotic response [GO:0006972]; proteolysis [GO:0006508]	hit with GO BP
GN001175	Chromosome_1A	6772	6	170	37.2563496751329	0.7257528667881256	9.812157274530394	170	0.047058823529411764	0.797649034424853	74	0	13.281628696073678	96	0.08333333333333333	0.35714285714285715	13	0	unmethylated (<10%)	P47743	Metabotropic glutamate receptor 8 (mGluR8)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; chemical synaptic transmission [GO:0007268]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of neurotransmitter secretion [GO:0046928]; regulation of synaptic transmission, glutamatergic [GO:0051966]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN001174	Chromosome_1A	8328	6	170	35.722862632084535	0.6534339250620544	0.6442705936493327	170	0	0.5087209302325582	32	0	0.6697648988518315	138	0	2.216511403790556	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006017	Chromosome_1A	294	1	9	45.91836734693877	0.6088357109986194	0.967741935483871	9	0	0.967741935483871	9	0	NA	NA	NA	0.7246376811594203	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001172	Chromosome_1A	1641	4	41	42.169408897014016	0.5623855895014	0.34324942791762014	23	0	0.4830917874396135	14	0	0.21739130434782608	9	0	0.6101694915254238	99	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006018	Chromosome_1A	2331	1	64	38.00943800943801	0.7646814596115699	0.5163043478260869	64	0	0.5163043478260869	64	0	NA	NA	NA	0.4657828735220351	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006019	Chromosome_1A	882	1	15	42.63038548752834	0.37585227272727273	1.079136690647482	15	0	1.079136690647482	15	0	NA	NA	NA	0.5755395683453237	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006020	Chromosome_1A	150	1	5	40.666666666666664	0.8081896551724138	0.5208333333333334	5	0	0.5208333333333334	5	0	NA	NA	NA	0.3929787791459261	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006021	Chromosome_1A	529	3	16	43.85633270321361	0.639709772503968	0.9380863039399625	16	0	0.7874015748031497	15	0	4	1	0	1.0843941537010844	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006022	Chromosome_1A	1052	2	29	44.866920152091254	0.5539757767245919	1.1450381679389312	12	0	3.7037037037037037	3	0	0.4807692307692308	9	0	2.5401069518716577	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006023	Chromosome_1A	1746	3	41	39.919816723940436	0.6053272450532724	1.3888888888888888	8	0	0	6	0	3.5294117647058822	2	0	2.4405506883604504	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006024	Chromosome_1A	7211	7	150	39.314935515185134	0.6062530406533958	0.6813417190775681	139	0	0.7100320659642694	114	0	0.5891016200294551	25	0	0.6819590824550527	53	0	unmethylated (<10%)	P86860	Shell matrix protein	NA	hit, no GO BP
GN006025	Chromosome_1A	861	1	37	43.670150987224154	0.9071158062587203	0.6374501992031872	37	0	0.6374501992031872	37	0	NA	NA	NA	0.4562043795620438	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001165	Chromosome_1A	1130	2	31	44.51327433628319	0.5582825996876295	0.6564551422319475	15	0	0.6711409395973155	6	0	0.6493506493506493	9	0	1.2093023255813953	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001157	Chromosome_1A	942	1	24	45.64755838641189	0.49525728931630486	0.9389671361502347	8	0	0.9389671361502347	8	0	NA	NA	NA	0.2649708532061473	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001158	Chromosome_1A	1281	3	16	35.831381733021075	0.3916832288640881	74.07407407407408	16	0.875	79.78260869565217	13	0.9230769230769231	61.86046511627907	3	0.6666666666666666	27.950310559006212	26	0.23076923076923078	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001159	Chromosome_1A	1610	4	18	33.72670807453416	0.40350877192982454	81.0377358490566	18	1	84.85576923076923	9	1	78.57142857142857	9	1	86.66107382550335	18	1	methylated (>=50%)	Q8WY91	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric Homo sapiens nitrobindin) (Hs-Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]	hit with GO BP
GN006026	Chromosome_1A	2785	2	46	37.091561938958705	0.48090783507012225	86.3242759032547	46	0.9565217391304348	89.60176991150442	6	1	85.81290990680014	40	0.95	91.23711340206185	23	1	methylated (>=50%)	Q5XHB2	Dual specificity protein phosphatase 22 (EC 3.1.3.16) (EC 3.1.3.48)	cellular response to growth factor stimulus [GO:0071363]; negative regulation of cell adhesion [GO:0007162]; negative regulation of T cell receptor signaling pathway [GO:0050860]; signal transduction [GO:0007165]	hit with GO BP
GN001145	Chromosome_1A	9172	9	196	35.13955516790231	0.6924045152931135	0.5098539072458084	196	0	0.5644402634054563	63	0	0.49547875634832156	133	0	0.6920415224913494	48	0	unmethylated (<10%)	P17178	Sterol 26-hydroxylase, mitochondrial (EC 1.14.15.15) (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 26-hydroxylase) (Cytochrome P-450C27/25) (Cytochrome P450 27) (Sterol 27-hydroxylase) (Vitamin D(3) 25-hydroxylase)	bile acid biosynthetic process [GO:0006699]; bile acid metabolic process [GO:0008206]; C21-steroid hormone biosynthetic process [GO:0006700]; calcitriol biosynthetic process from calciol [GO:0036378]; cholesterol catabolic process [GO:0006707]; cholesterol metabolic process [GO:0008203]; positive regulation of smoothened signaling pathway [GO:0045880]; steroid catabolic process [GO:0006706]	hit with GO BP
GN006027	Chromosome_1A	8976	8	227	35.03787878787879	0.8241690767519466	0.6644156409977127	210	0	0.6218905472636815	89	0	0.6795686216575565	121	0	1.0452961672473868	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001147	Chromosome_1A	1221	1	40	42.34234234234234	0.7313566936208445	1.3496932515337423	40	0	1.3496932515337423	40	0	NA	NA	NA	0.740990232401482	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001151	Chromosome_1A	4732	5	77	34.065934065934066	0.5611859381617958	73.11201708406135	77	0.8181818181818182	60.67615658362989	9	0.6666666666666666	74.63499673131402	68	0.8382352941176471	59.94832041343669	20	0.65	methylated (>=50%)	Q9D187	Cytosolic iron-sulfur assembly component 2B (Mitotic spindle-associated MMXD complex subunit MIP18)	chromosome segregation [GO:0007059]; protein maturation [GO:0051604]	hit with GO BP
GN006030	Chromosome_1A	662	2	15	41.54078549848943	0.5255636710066688	75.69786535303777	15	0.9333333333333333	77.0618556701031	10	1	73.303167420814475	5	0.8	76.70396744659206	24	0.9583333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006031	Chromosome_1A	12884	4	150	35.811859670909655	0.364152308596753	65.31997962994399	119	0.7815126050420168	77.574047954866	35	0.8285714285714286	61.435278336686785	84	0.7619047619047619	70.07874015748031	17	0.7647058823529411	methylated (>=50%)	A2RT91	Ankyrin and armadillo repeat-containing protein	NA	hit, no GO BP
GN001153	Chromosome_1A	12540	9	150	35.25518341307815	0.38598867274070425	82.28296136073149	150	0.9066666666666666	85.34798534798534	11	1	82.10909090909091	139	0.8992805755395683	82.42142025611176	16	0.875	methylated (>=50%)	P26599	Polypyrimidine tract-binding protein 1 (PTB) (57 kDa RNA-binding protein PPTB-1) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I)	IRES-dependent viral translational initiation [GO:0075522]; mRNA processing [GO:0006397]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; negative regulation of muscle cell differentiation [GO:0051148]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of RNA splicing [GO:0033119]; positive regulation of calcineurin-NFAT signaling cascade [GO:0070886]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of cell differentiation [GO:0045595]; RNA splicing [GO:0008380]	hit with GO BP
GN001154	Chromosome_1A	16607	3	157	35.966761004395735	0.2947248826435429	48.656186612576064	157	0.5477707006369427	76.42314990512334	54	0.8518518518518519	38.529411764705884	103	0.3883495145631068	4.340277777777778	12	0	sparse (10-50%)	Q61140	Breast cancer anti-estrogen resistance protein 1 (CRK-associated substrate) (p130cas)	actin cytoskeleton organization [GO:0030036]; actin filament organization [GO:0007015]; antigen receptor-mediated signaling pathway [GO:0050851]; B cell receptor signaling pathway [GO:0050853]; cell chemotaxis [GO:0060326]; cell migration [GO:0016477]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to endothelin [GO:1990859]; cellular response to hepatocyte growth factor stimulus [GO:0035729]; cellular response to nitric oxide [GO:0071732]; endothelin receptor signaling pathway [GO:0086100]; epidermal growth factor receptor signaling pathway [GO:0007173]; G protein-coupled receptor signaling pathway [GO:0007186]; hepatocyte growth factor receptor signaling pathway [GO:0048012]; insulin receptor signaling pathway [GO:0008286]; integrin-mediated signaling pathway [GO:0007229]; negative regulation of substrate adhesion-dependent cell spreading [GO:1900025]; neurotrophin TRK receptor signaling pathway [GO:0048011]; platelet-derived growth factor receptor signaling pathway [GO:0048008]; positive regulation of cell migration [GO:0030335]; positive regulation of endothelial cell migration [GO:0010595]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]	hit with GO BP
GN006033	Chromosome_1A	231	1	2	41.125541125541126	0.21329639889196675	63.63636363636363	2	0.5	63.63636363636363	2	0.5	NA	NA	NA	78.23908375089478	22	1	NA	NA	NA	NA	no Swiss-Prot hit
GN006034	Chromosome_1A	3766	6	45	35.92671269251195	0.37138411640953717	86.78844519966016	45	1	89.34733683420855	28	1	83.44760039177277	17	1	37.13149274684137	60	0.4166666666666667	methylated (>=50%)	F1QG30	Sphingomyelin phosphodiesterase 5 (EC 3.1.4.12) (Mitochondrial neutral sphingomyelinase) (mtnSMase)	ceramide biosynthetic process [GO:0046513]; glycosphingolipid metabolic process [GO:0006687]; sphingomyelin catabolic process [GO:0006685]; sphingomyelin metabolic process [GO:0006684]	hit with GO BP
GN006035	Chromosome_1A	432	1	20	49.76851851851852	0.7596272199753824	0	20	0	0	20	0	NA	NA	NA	0.7378640776699029	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006036	Chromosome_1A	279	1	8	46.59498207885304	0.5287846481876333	1.2578616352201257	8	0	1.2578616352201257	8	0	NA	NA	NA	0.7153075822603719	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006037	Chromosome_1A	21117	11	623	39.02069422739972	0.7750651646915184	0.8357452966714906	538	0	0.6109201985490645	115	0	0.888313543433622	423	0	0.6060606060606061	39	0	unmethylated (<10%)	Q16515	Acid-sensing ion channel 2 (ASIC2) (Amiloride-sensitive cation channel 1, neuronal) (Amiloride-sensitive cation channel neuronal 1) (Brain sodium channel 1) (BNC1) (BNaC1) (Mammalian degenerin homolog) (MDEG)	cellular response to acidic pH [GO:0071468]; cellular response to xenobiotic stimulus [GO:0071466]; regulation of postsynapse assembly [GO:0150052]; sensory perception of sour taste [GO:0050915]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN001156	Chromosome_1A	330	1	14	47.27272727272727	0.7604938271604939	1.075268817204301	14	0	1.075268817204301	14	0	NA	NA	NA	0.45045045045045046	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006038	Chromosome_1A	17395	18	452	36.22880137970681	0.7927066319843526	10.048776770063258	451	0	20.90995260663507	133	0	7.316258883006629	318	0	1.645123384253819	45	0	sparse (10-50%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN001141	Chromosome_1A	22184	17	311	37.720879913451135	0.39442321179844514	71.6167810090462	307	0.7817589576547231	78.53014037985136	94	0.925531914893617	69.66038323726437	213	0.7183098591549296	41.39142656359803	26	0.2692307692307692	methylated (>=50%)	Q8BXA7	PH domain leucine-rich repeat-containing protein phosphatase 2 (EC 3.1.3.16) (PH domain leucine-rich repeat-containing protein phosphatase-like) (PHLPP-like)	intracellular signal transduction [GO:0035556]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN006040	Chromosome_1A	1147	4	17	45.335658238884044	0.28999538958045185	54.1635408852213	16	0.875	54.16301489921122	14	0.8571428571428571	54.166666666666664	2	1	64.71125313855285	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006041	Chromosome_1A	1349	2	42	43.95848776871757	0.6460285968392967	95.98163030998852	42	1	97.09950914770192	34	1	89.24731182795699	8	1	96.54218533886583	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006042	Chromosome_1A	17234	8	482	35.12823488453058	0.9069174555222987	0.6013674932037235	472	0	0.7433489827856025	90	0	0.5846607126415615	382	0	0.5622284692052134	95	0	unmethylated (<10%)	Q90837	Transcriptional regulator Erg	cell differentiation [GO:0030154]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006043	Chromosome_1A	4866	5	132	33.66214549938348	0.9636568767478426	0.6135679555452651	132	0	0.6442376521116678	29	0	0.6076508769506974	103	0	0.7022900763358778	50	0	unmethylated (<10%)	Q01414	Transcriptional regulator ERG homolog	cell differentiation [GO:0030154]	hit with GO BP
GN006044	Chromosome_1A	1741	3	45	37.162550258472145	0.7487098623853211	0.7126948775055679	45	0	1.059135039717564	24	0	0.3597122302158273	21	0	0.7218212104386452	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006045	Chromosome_1A	10526	5	216	35.58806764202926	0.6481022703658633	1.5347602455616394	208	0.004807692307692308	0.4551661356395084	56	0	1.775388049102161	152	0.006578947368421052	2.087810868897759	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006046	Chromosome_1A	13456	8	172	36.29607609988109	0.3925239002266343	86.54373522458629	171	0.9649122807017544	85.40372670807453	13	0.9230769230769231	86.65834113851598	158	0.9683544303797469	45.942373777425324	58	0.4827586206896552	methylated (>=50%)	Q4ADK4	Heterochromatin-stabilizing protein CFDP1 (Bucentaur) (Craniofacial development protein 1)	NA	hit, no GO BP
GN006047	Chromosome_1A	270	1	9	44.81481481481482	0.7323688969258589	95.1219512195122	9	1	95.1219512195122	9	1	NA	NA	NA	90.13683010262258	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006048	Chromosome_1A	4082	6	46	36.918177364037234	0.33204245401463467	92.9714683368128	46	1	95.98352214212153	17	1	91.43457698370993	29	1	91.42212189616252	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006049	Chromosome_1A	3486	6	37	34.710269650028685	0.3535022158637758	93.57993197278911	36	1	95.6221198156682	21	1	91.04761904761905	15	1	93.3076923076923	25	1	methylated (>=50%)	Q3UJB9	Enhancer of mRNA-decapping protein 4	deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]	hit with GO BP
GN001138	Chromosome_1A	657	1	20	42.61796042617961	0.670545009185548	0.34812880765883375	20	0	0.34812880765883375	20	0	NA	NA	NA	0.547845142439737	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006050	Chromosome_1A	7092	6	221	35.58939650310209	0.9851467318850281	0.6306852637962401	213	0	0.5398671096345515	46	0	0.6462150262746769	167	0	0.39011703511053314	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006051	Chromosome_1A	507	1	23	44.37869822485207	0.9279802642049976	0.6535947712418301	23	0	0.6535947712418301	23	0	NA	NA	NA	0.5836575875486382	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006052	Chromosome_1A	2328	4	53	38.402061855670105	0.6184041700080193	0.4694835680751174	7	0	0	4	0	0.7633587786259542	3	0	2.6143790849673203	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006053	Chromosome_1A	2199	6	65	39.017735334242836	0.7864936694233976	0.6861063464837049	64	0	0.49049662783568365	39	0	0.9345794392523364	25	0	0.7525870178739417	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006054	Chromosome_1A	489	1	5	36.605316973415135	0.31346153846153846	75.09881422924902	5	1	75.09881422924902	5	1	NA	NA	NA	48.29931972789116	29	0.4827586206896552	methylated (>=50%)	Q5NDE3	Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 (POMGnT2) (EC 2.4.1.312) (Extracellular O-linked N-acetylglucosamine transferase-like) (Glycosyltransferase-like domain-containing protein 2)	neuron migration [GO:0001764]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via mannose [GO:0035269]	hit with GO BP
GN006055	Chromosome_1A	2550	5	62	36.588235294117645	0.7365410059072359	0.8132624335314357	62	0	0.8522727272727273	21	0	0.7940214852872489	41	0	0.49064704078503524	60	0	unmethylated (<10%)	Q64449	C-type mannose receptor 2 (Lectin lambda) (Macrophage mannose receptor 2) (CD antigen CD280)	collagen catabolic process [GO:0030574]; receptor-mediated endocytosis [GO:0006898]	hit with GO BP
GN006056	Chromosome_1A	4981	3	144	35.354346516763705	0.9259439990705239	2.9142381348875936	144	0	0.7309941520467836	19	0	3.143207605029132	125	0	0.3183023872679045	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006057	Chromosome_1A	9824	8	243	36.024022801302934	0.7628796531296117	0.9662565109081301	240	0	1.0732323232323233	52	0	0.9517276858441225	188	0	0.44037940379403795	64	0	unmethylated (<10%)	Q80TB8	Putative NADPH-dependent quinone oxidoreductase VAT1L (EC 1.6.5.5) (Synaptic vesicle membrane protein VAT-1 homolog-like) (Vesicle amine transport protein 1 like)	NA	hit, no GO BP
GN006058	Chromosome_1A	33183	27	365	34.63821836482536	0.3715241148292747	85.49003984063745	362	0.9447513812154696	88.39899937460913	60	0.9333333333333333	85.06529084101909	302	0.9470198675496688	0.8094186902133922	46	0	methylated (>=50%)	Q75QN2	Integrator complex subunit 8 (Int8) (Protein kaonashi-1)	protein localization to chromatin [GO:0071168]; regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]; snRNA processing [GO:0016180]	hit with GO BP
GN006059	Chromosome_1A	375	1	11	45.06666666666667	0.6035996488147498	0.45146726862302483	11	0	0.45146726862302483	11	0	NA	NA	NA	0.41348600508905853	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001130	Chromosome_1A	161	1	9	50.93167701863354	0.8666267942583732	94.17040358744394	9	1	94.17040358744394	9	1	NA	NA	NA	8.134556574923547	39	0.1794871794871795	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006060	Chromosome_1A	177	1	9	51.9774011299435	0.7901785714285714	91.60583941605839	9	1	91.60583941605839	9	1	NA	NA	NA	44.860499265785606	34	0.4117647058823529	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006061	Chromosome_1A	246	1	12	49.59349593495935	0.7935483870967742	0.4032258064516129	12	0	0.4032258064516129	12	0	NA	NA	NA	0.7860262008733624	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001128	Chromosome_1A	7185	3	224	34.947807933194156	1.021095172536306	1.4595539109877684	222	0	1.0714285714285714	11	0	1.4832588068491657	211	0	0.6310679611650486	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001127	Chromosome_1A	944	3	24	52.22457627118644	0.3807603105777957	6.079027355623101	16	0	5.204460966542751	12	0	10	4	0	1.9121447028423773	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006063	Chromosome_1A	492	1	13	56.91056910569106	0.33458882611424984	1.7316017316017316	13	0	1.7316017316017316	13	0	NA	NA	NA	1.3148626438131017	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010827	Chromosome_1A	223	1	8	57.847533632286996	0.436399217221135	0.970873786407767	8	0	0.970873786407767	8	0	NA	NA	NA	5.613577023498695	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001125	Chromosome_1A	599	2	18	39.065108514190314	0.8285560593252901	2.849002849002849	18	0	2.9082774049217	12	0	2.7450980392156863	6	0	0.7729468599033816	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006065	Chromosome_1A	192	1	14	46.875	1.344	0.9363295880149812	14	0	0.9363295880149812	14	0	NA	NA	NA	1.640625	86	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001123	Chromosome_1A	1879	4	51	38.850452368281	0.7238714648295866	0.5147402901263454	51	0	0.6626506024096386	44	0	0	7	0	7.79324055666004	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001122	Chromosome_1A	1766	3	31	33.86183465458664	0.6123919147174961	0.38809831824062097	31	0	0.23837902264600716	19	0	0.5657708628005658	12	0	1.92435301924353	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001121	Chromosome_1A	249	1	11	52.610441767068274	0.6713235294117647	0.4267425320056899	11	0	0.4267425320056899	11	0	NA	NA	NA	0.4214328717639976	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001120	Chromosome_1A	1019	2	27	42.88518155053975	0.5784903280067284	2.6160337552742616	27	0	1.5075376884422111	20	0	3.741496598639456	7	0	0.7526881720430108	70	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN006068	Chromosome_1A	183	1	18	49.72677595628415	1.7210031347962382	0.41237113402061853	18	0	0.41237113402061853	18	0	NA	NA	NA	6.49867374005305	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001118	Chromosome_1A	628	2	20	39.49044585987261	0.851467697105281	2.5793650793650795	16	0	2.742616033755274	14	0	0	2	0	2.698706099815157	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001117	Chromosome_1A	642	3	12	41.12149532710281	0.44214876033057854	1.2048192771084338	12	0	1.2048192771084338	12	0	NA	NA	NA	1.1073253833049403	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006070	Chromosome_1A	174	1	15	64.94252873563218	0.8192090395480226	NA	0	NA	NA	NA	NA	NA	NA	NA	20.87912087912088	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003818	Chromosome_1A	512	2	2	39.84375	0.09866075729839098	26.16822429906542	1	0	26.16822429906542	1	0	NA	NA	NA	9.07960199004975	22	0	NA	Q6ZU67	BEN domain-containing protein 4 (Coiled-coil domain-containing protein 4)	NA	hit, no GO BP
GN006071	Chromosome_1A	1344	2	29	39.285714285714285	0.5603864734299517	22.067363530778167	28	0	25.84070796460177	17	0	14.864864864864865	11	0	14.108618654073199	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006072	Chromosome_1A	759	1	26	42.29249011857708	0.7988180051813472	0.2635046113306983	26	0	0.2635046113306983	26	0	NA	NA	NA	0.6161971830985915	74	0	unmethylated (<10%)	Q9WIJ5	Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.-) (ATP-dependent helicase C2) (Replication-associated protein 2) (Rep2)	DNA replication [GO:0006260]	hit with GO BP
GN006073	Chromosome_1A	1659	3	49	36.76913803496082	0.878859626362221	0.6194690265486725	47	0	0.7290400972053463	25	0	0.5567153792623522	22	0	0.5628517823639775	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001112	Chromosome_1A	2371	3	23	33.53015605229861	0.34893527168488137	3.585657370517928	23	0	1.4656144306651635	15	0	6.623586429725363	8	0	1.6270888302550572	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006075	Chromosome_1A	5472	6	49	33.808479532163744	0.31444255895035705	1.5748031496062993	49	0	1.325088339222615	23	0	1.7755681818181819	26	0	1.335113484646195	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006076	Chromosome_1A	357	1	8	43.13725490196079	0.5063829787234042	1.40597539543058	8	0	1.40597539543058	8	0	NA	NA	NA	0.5537974683544303	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006077	Chromosome_1A	1507	3	14	35.96549435965494	0.289013698630137	0.8871989860583016	14	0	0.6493506493506493	6	0	1.0395010395010396	8	0	3.6572052401746724	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006078	Chromosome_1A	1077	2	22	33.79758588672237	0.7174781976744186	0.665083135391924	22	0	0.6888633754305397	13	0	0.6482982171799028	9	0	1.3412017167381973	39	0	unmethylated (<10%)	Q9D305	THAP domain-containing protein 2	NA	hit, no GO BP
GN006079	Chromosome_1A	1290	1	58	42.86821705426357	0.9790374499489676	0.8672086720867209	58	0	0.8672086720867209	58	0	NA	NA	NA	1.6802906448683015	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001107	Chromosome_1A	576	1	16	37.673611111111114	0.7856777493606139	0.5668934240362812	16	0	0.5668934240362812	16	0	NA	NA	NA	0.5402485143165856	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001106	Chromosome_1A	447	1	6	37.360178970917225	0.38578826237054087	0.9615384615384616	6	0	0.9615384615384616	6	0	NA	NA	NA	9.597600599850038	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006081	Chromosome_1A	9592	4	245	37.23936613844871	0.7370038637161925	0.7560907308877065	243	0	0.7120253164556962	42	0	0.7603686635944701	201	0	0.5516154452324665	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006082	Chromosome_1A	8260	3	234	33.87409200968523	0.9876036034931258	3.886104452676691	227	0	1.238390092879257	21	0	4.016462159896349	206	0	2.692778457772338	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006083	Chromosome_1A	2867	8	32	34.600627833972794	0.3760138693640339	14.775725593667547	31	0.06451612903225806	23.115577889447238	17	0.11764705882352941	10.284167794316645	14	0	0.9905894006934126	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006084	Chromosome_1A	381	1	16	44.09448818897638	0.865909090909091	0.8522727272727273	16	0	0.8522727272727273	16	0	NA	NA	NA	1.5951595159515952	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006085	Chromosome_1A	4571	7	126	37.62852767446948	0.7796128372040138	0.5846199970019488	126	0	0.42735042735042733	26	0	0.6358036956089808	100	0	0.6892748828232699	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006086	Chromosome_1A	3716	4	83	34.04198062432723	0.7746255311881536	0.5024284039524368	82	0	0.5424063116370809	29	0	0.48186659903626683	53	0	0.3115264797507788	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006087	Chromosome_1A	1187	2	13	37.573715248525694	0.32814460393407763	89.14233576642336	13	1	89.14233576642336	13	1	NA	NA	NA	85.38238141335914	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006088	Chromosome_1A	1751	3	47	39.46316390633923	0.6963699441529869	81.36996612721114	47	0.9787234042553191	84.16912487708947	20	1	79.63414634146342	27	0.9629629629629629	86.58043654001617	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006089	Chromosome_1A	1455	1	73	46.94158075601374	0.9109191952110598	0.8986928104575164	63	0	0.8986928104575164	63	0	NA	NA	NA	0.7465618860510805	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006090	Chromosome_1A	1599	1	68	45.65353345841151	0.8181428281201797	0.7522331922896098	68	0	0.7522331922896098	68	0	NA	NA	NA	1.4027316352897747	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006091	Chromosome_1A	1833	1	103	48.6088379705401	0.9520205330939823	0.660377358490566	101	0	0.660377358490566	101	0	NA	NA	NA	0.9204712812960235	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006092	Chromosome_1A	2891	2	123	42.75337253545486	0.9310959707573552	7.366071428571429	110	0	7.869305108145421	96	0	6.230529595015576	14	0	5.838847800700662	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006093	Chromosome_1A	1131	1	39	42.705570291777185	0.7598449612403101	0.7927519818799547	39	0	0.7927519818799547	39	0	NA	NA	NA	0.5488043904351235	48	0	unmethylated (<10%)	Q5F2F2	Protein ABHD15 (Alpha/beta hydrolase domain-containing protein 15) (Abhydrolase domain-containing protein 15)	adipose tissue development [GO:0060612]; lipid catabolic process [GO:0016042]; lipid metabolic process [GO:0006629]	hit with GO BP
GN006094	Chromosome_1A	4972	5	163	37.047465808527754	0.9565860930552621	0.5630198336532309	163	0	0.6103286384976526	56	0	0.5452946350043976	107	0	6.210561275323813	43	0.06976744186046512	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001029	Chromosome_1A	591	1	12	41.11675126903553	0.5127241179872759	91.88235294117646	12	1	91.88235294117646	12	1	NA	NA	NA	94	18	1	methylated (>=50%)	A7MCB7	Translation machinery-associated protein 16	ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN006095	Chromosome_1A	17143	19	215	33.96138365513621	0.43747299728904654	79.9737456242707	213	0.9107981220657277	84.70066518847007	24	0.9166666666666666	79.45626668824339	189	0.91005291005291	93.9978563772776	28	1	methylated (>=50%)	Q54PZ6	Putative uncharacterized protein DDB_G0284213	early endosome to late endosome transport [GO:0045022]	hit with GO BP
GN006096	Chromosome_1A	882	1	39	42.63038548752834	0.9736752717391305	0.34812880765883375	30	0	0.34812880765883375	30	0	NA	NA	NA	0.6663705019991115	50	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN006097	Chromosome_1A	1120	3	41	40.625	0.8908547704962557	0.5453962143086301	41	0	0.4694835680751174	27	0	0.6666666666666666	14	0	1.3183785911058639	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001047	Chromosome_1A	750	1	30	43.333333333333336	0.8520790729379687	0.6369426751592356	30	0	0.6369426751592356	30	0	NA	NA	NA	0.5755395683453237	68	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN006098	Chromosome_1A	22086	15	308	35.23499049171421	0.4499690428690116	82.5864647146785	308	0.9253246753246753	89.91127177127835	70	0.9714285714285714	81.32632293080054	238	0.9117647058823529	16.863033873343152	52	0.17307692307692307	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001046	Chromosome_1A	10058	7	199	35.71286538079141	0.622483256438127	86.82412358882947	198	0.9040404040404041	95.33502968617472	19	1	86.00732600732601	179	0.8938547486033519	6	38	0.05263157894736842	methylated (>=50%)	Q3T0E7	Serine/threonine-protein phosphatase PP1-alpha catalytic subunit (PP-1A) (EC 3.1.3.16)	circadian regulation of gene expression [GO:0032922]; entrainment of circadian clock by photoperiod [GO:0043153]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of glycogen biosynthetic process [GO:0045725]; positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled [GO:2000806]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; protein dephosphorylation [GO:0006470]; protein stabilization [GO:0050821]; regulation of circadian rhythm [GO:0042752]; RNA polymerase II promoter clearance [GO:0001111]; telomere maintenance in response to DNA damage [GO:0043247]	hit with GO BP
GN006100	Chromosome_1A	843	2	35	41.39976275207592	0.9825174825174825	0.7131537242472267	35	0	0.676818950930626	32	0	1.25	3	0	0.5913660555884093	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006101	Chromosome_1A	1336	3	39	36.97604790419162	0.8695594125500667	0.5764966740576497	39	0	0.5309734513274337	33	0	0.7142857142857143	6	0	0.5623242736644799	37	0	unmethylated (<10%)	Q71W03	Macro domain-containing protein LMOf2365_2748	NA	hit, no GO BP
GN001039	Chromosome_1A	3560	3	56	33.23033707865169	0.5787441576915261	0.7771301693033583	56	0	1.2455516014234875	20	0	0.5647438483259378	36	0	0.7314524555903866	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001038	Chromosome_1A	33040	11	552	35.88680387409201	0.5192239858906526	1.4850802839225414	520	0	1.1703511053315996	55	0	1.5122590305072057	465	0	0.5939123979213066	27	0	unmethylated (<10%)	Q8N9I9	E3 ubiquitin-protein ligase DTX3 (EC 2.3.2.27) (Protein deltex-3) (Deltex3) (RING finger protein 154) (RING-type E3 ubiquitin transferase DTX3)	Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN006102	Chromosome_1A	5813	4	81	36.52158954068467	0.4186096753028533	53.81770145310436	81	0.4691358024691358	58.145695364238414	20	0.45	52.73927392739274	61	0.47540983606557374	90.01248439450687	12	1	methylated (>=50%)	Q8N9I9	E3 ubiquitin-protein ligase DTX3 (EC 2.3.2.27) (Protein deltex-3) (Deltex3) (RING finger protein 154) (RING-type E3 ubiquitin transferase DTX3)	Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN001037	Chromosome_1A	6815	4	57	36.02347762289068	0.2582994546158173	83.58473824312334	57	0.9473684210526315	86.57829328914664	19	1	81.92272309107636	38	0.9210526315789473	52.73757079924481	31	0.5161290322580645	methylated (>=50%)	Q4J9D2	Uncharacterized protein Saci_1252	NA	hit, no GO BP
GN006103	Chromosome_1A	1271	3	34	40.20456333595594	0.6619994485125157	0.6266786034019696	34	0	0.6925207756232687	23	0	0.5063291139240507	11	0	0.41113219481340924	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006104	Chromosome_1A	255	1	4	39.21568627450981	0.40865384615384615	71.97231833910034	4	1	71.97231833910034	4	1	NA	NA	NA	65.77777777777777	15	0.6	NA	NA	NA	NA	no Swiss-Prot hit
GN006105	Chromosome_1A	498	2	7	36.34538152610442	0.43849056603773584	87.6	7	1	87.6	7	1	NA	NA	NA	91.84415584415585	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006106	Chromosome_1A	1983	2	79	44.024205748865356	0.8222946586041824	0.5034053893988747	78	0	0.5120481927710844	76	0	0	2	0	0.5480335267569311	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006107	Chromosome_1A	405	1	28	47.160493827160494	1.243421052631579	0.9291521486643438	28	0	0.9291521486643438	28	0	NA	NA	NA	1.904176904176904	56	0	unmethylated (<10%)	Q9WTS8	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of interleukin-8 production [GO:0032757]	hit with GO BP
GN006108	Chromosome_1A	858	2	43	46.386946386946384	0.9478227360308286	1.6467065868263473	36	0	1.5527950310559007	35	0	4.166666666666667	1	0	1.261715933669791	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001034	Chromosome_1A	2758	4	45	36.18564176939812	0.4992337118515211	77.76168055052517	45	0.7333333333333333	59.972862957937586	20	0.55	84.23913043478261	25	0.88	0.7142857142857143	85	0	methylated (>=50%)	O12947	Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100) (Farnesyl cysteine carboxyl methyltransferase) (FCMT) (Isoprenylcysteine carboxylmethyltransferase) (Prenylated protein carboxyl methyltransferase) (PPMT) (Prenylcysteine carboxyl methyltransferase) (pcCMT)	NA	hit, no GO BP
GN001033	Chromosome_1A	14403	16	176	32.69457751857252	0.4572653134115126	80.48568321855745	176	0.9034090909090909	78.40796019900498	32	0.90625	80.8400509121765	144	0.9027777777777778	57.83736004714201	39	0.5384615384615384	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006110	Chromosome_1A	13727	11	189	33.29933707292198	0.4993602099065837	85.46345988206453	188	0.898936170212766	85.5873642645607	19	0.9473684210526315	85.45454545454545	169	0.893491124260355	36.18662747979427	37	0.43243243243243246	methylated (>=50%)	Q5E9F9	26S proteasome regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2)	ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN006111	Chromosome_1A	213	1	13	45.539906103286384	1.180306905370844	0.5263157894736842	13	0	0.5263157894736842	13	0	NA	NA	NA	0.4697592483852026	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006112	Chromosome_1A	1081	3	34	41.25809435707678	0.7391007078507078	1.1363636363636365	19	0	1.2784090909090908	15	0	0	4	0	0.42583392476933996	57	0	unmethylated (<10%)	Q9NRA2	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Membrane glycoprotein HP59) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	carbohydrate derivative transport [GO:1901264]; monoatomic anion transport [GO:0006820]; neurotransmitter loading into synaptic vesicle [GO:0098700]; sialic acid transport [GO:0015739]	hit with GO BP
GN006113	Chromosome_1A	2496	1	33	49.318910256410255	0.23666245259165614	0	1	0	0	1	0	NA	NA	NA	0.9208103130755064	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006114	Chromosome_1A	312	1	4	37.5	0.36533957845433257	0.7874015748031497	4	0	0.7874015748031497	4	0	NA	NA	NA	5.467511885895404	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006115	Chromosome_1A	681	1	43	39.06020558002937	1.6562782805429865	0.6097560975609756	38	0	0.6097560975609756	38	0	NA	NA	NA	0.9437672040896579	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006116	Chromosome_1A	231	1	13	55.84415584415584	0.7222222222222222	1.9950124688279303	13	0	1.9950124688279303	13	0	NA	NA	NA	0.4383007417397168	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001071	Chromosome_1A	1347	1	29	43.652561247216035	0.45522135856708346	87.53292361720808	29	1	87.53292361720808	29	1	NA	NA	NA	74.38148443735037	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001072	Chromosome_1A	11621	10	123	36.58032871525686	0.31651331656933923	94.28813798953767	123	1	95.66582914572864	34	1	93.88797664659734	89	1	4.782608695652174	36	0.027777777777777776	methylated (>=50%)	Q8R3V6	CUE domain-containing protein 1	NA	hit, no GO BP
GN001059	Chromosome_1A	1770	2	77	43.333333333333336	0.9266889686684073	0.7755474452554745	71	0	0.9320905459387483	22	0	0.6939625260235948	49	0	0.8273381294964028	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001058	Chromosome_1A	3234	2	100	36.7965367965368	0.9139310906131307	0.6801503490245212	100	0	0.7722813608849927	86	0	0.12562814070351758	14	0	1.1226611226611227	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001057	Chromosome_1A	3070	2	83	33.648208469055376	0.955719086626459	0.6272050176401411	82	0	0.746268656716418	30	0	0.5955334987593052	52	0	0.7563025210084033	52	0	unmethylated (<10%)	O15075	Serine/threonine-protein kinase DCLK1 (EC 2.7.11.1) (Doublecortin domain-containing protein 3A) (Doublecortin-like and CAM kinase-like 1) (Doublecortin-like kinase 1)	axon extension [GO:0048675]; central nervous system development [GO:0007417]; endosomal transport [GO:0016197]; intracellular signal transduction [GO:0035556]; nervous system development [GO:0007399]; protein phosphorylation [GO:0006468]; response to virus [GO:0009615]	hit with GO BP
GN001056	Chromosome_1A	2213	10	65	38.95164934478084	0.7769693630628295	0.9229676961306355	65	0	0.8763388510223953	48	0	1.0484927916120577	17	0	0.9450945094509451	46	0	unmethylated (<10%)	Q05BC3	Echinoderm microtubule-associated protein-like 1 (EMAP-1)	brain development [GO:0007420]; hematopoietic progenitor cell differentiation [GO:0002244]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle organization [GO:0007052]; neuroblast proliferation [GO:0007405]	hit with GO BP
GN001055	Chromosome_1A	477	1	18	39.41299790356394	1.0130973451327434	10.269254852849093	18	0	10.269254852849093	18	0	NA	NA	NA	2.2988505747126435	41	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006120	Chromosome_1A	11356	12	175	34.66889749911941	0.5129082644483055	78.88141527688197	175	0.8914285714285715	86.40296662546353	28	1	77.56361667569031	147	0.8707482993197279	72.14484679665738	29	0.9310344827586207	methylated (>=50%)	P40720	Fumarate hydratase class I, aerobic (EC 4.2.1.2) (Fumarase A) (Oxaloacetate keto--enol-isomerase) (OAAKE isomerase) (Oxaloacetate tautomerase) (EC 5.3.2.2)	tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN006121	Chromosome_1A	4243	6	63	35.2816403488098	0.47873952288845906	70.61622650487747	63	0.746031746031746	50.5795574288725	18	0.5555555555555556	76.45974185617702	45	0.8222222222222222	1.3100436681222707	43	0	methylated (>=50%)	O35130	Ribosomal RNA small subunit methyltransferase NEP1 (EC 2.1.1.-) (18S rRNA (pseudouridine(1248)-N1)-methyltransferase) (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1)	blastocyst development [GO:0001824]; nucleologenesis [GO:0017126]; ribosomal small subunit biogenesis [GO:0042274]; rRNA base methylation [GO:0070475]	hit with GO BP
GN006122	Chromosome_1A	2195	8	70	38.086560364464695	0.8803744957829116	72.88935500786576	70	0.7	88.88438133874239	44	0.8636363636363636	43.66197183098591	26	0.4230769230769231	4.1541541541541545	72	0	methylated (>=50%)	P42674	Blastula protease 10 (EC 3.4.24.-)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN006123	Chromosome_1A	851	2	33	39.130434782608695	1.0150726523530686	0.6541291905151267	33	0	0.5623242736644799	29	0	1.2820512820512822	4	0	0.38095238095238093	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001051	Chromosome_1A	6649	4	76	35.37374041209205	0.36575089732463717	82.4448146605581	76	0.9473684210526315	84.69945355191257	9	0.8888888888888888	82.25879170423805	67	0.9552238805970149	85.44331715924129	28	1	methylated (>=50%)	Q8WZA0	Protein LZIC (Leucine zipper and CTNNBIP1 domain-containing protein) (Leucine zipper and ICAT homologous domain-containing protein)	response to ionizing radiation [GO:0010212]	hit with GO BP
GN001050	Chromosome_1A	957	1	40	41.2748171368861	0.9813874788494078	0.6784260515603799	40	0	0.6784260515603799	40	0	NA	NA	NA	0.515084621044886	82	0	unmethylated (<10%)	H9J9M0	Chitin deacetylase 1 (BmCDA1) (EC 3.5.1.41)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN001049	Chromosome_1A	909	1	9	43.124312431243126	0.21351393673661134	87.96680497925311	9	1	87.96680497925311	9	1	NA	NA	NA	91.51020408163265	14	1	methylated (>=50%)	A9UUB8	GDP-fucose transporter 1 (Solute carrier family 35 member C1 homolog)	GDP-fucose import into Golgi lumen [GO:0036085]	hit with GO BP
GN006125	Chromosome_1A	17040	9	178	35.32276995305164	0.33648863538788515	88.80436902672128	175	0.9828571428571429	93.04078014184397	46	1	87.60940235058764	129	0.9767441860465116	76.33158289572393	31	1	methylated (>=50%)	P42575	Caspase-2 (CASP-2) (EC 3.4.22.55) (Neural precursor cell expressed developmentally down-regulated protein 2) (NEDD-2) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cellular response to mechanical stimulus [GO:0071260]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; execution phase of apoptosis [GO:0097194]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; luteolysis [GO:0001554]; negative regulation of apoptotic process [GO:0043066]; neural retina development [GO:0003407]; positive regulation of apoptotic process [GO:0043065]; positive regulation of neuron apoptotic process [GO:0043525]; protein processing [GO:0016485]	hit with GO BP
GN006126	Chromosome_1A	33230	25	495	35.44688534456816	0.47474182485044586	92.77477421169412	485	0.9731958762886598	95.9114959114959	89	1	92.30631083653604	396	0.9671717171717171	83.6734693877551	41	0.9512195121951219	methylated (>=50%)	Q9UHV7	Mediator of RNA polymerase II transcription subunit 13 (Activator-recruited cofactor 250 kDa component) (ARC250) (Mediator complex subunit 13) (Thyroid hormone receptor-associated protein 1) (Thyroid hormone receptor-associated protein complex 240 kDa component) (Trap240) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP250)	cholesterol homeostasis [GO:0042632]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN006127	Chromosome_1A	2083	5	27	33.36533845415266	0.47152774284420745	33.910034602076124	27	0.2962962962962963	42.02020202020202	9	0.3333333333333333	30.669895076674738	18	0.2777777777777778	34.914950760966875	39	0.41025641025641024	sparse (10-50%)	Q5SWW4	Mediator of RNA polymerase II transcription subunit 13 (Thyroid hormone receptor-associated protein 1) (Thyroid hormone receptor-associated protein complex 240 kDa component) (Trap240)	cholesterol homeostasis [GO:0042632]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN006128	Chromosome_1A	1964	2	51	37.21995926680244	0.798755980861244	85.73757131214344	45	1	84.15730337078652	40	1	89.91097922848665	5	1	80.02980625931446	30	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001076	Chromosome_1A	1072	2	14	36.66044776119403	0.3917924084999739	91.10512129380054	14	1	92.3076923076923	9	1	89.86301369863014	5	1	90.11709601873537	29	1	methylated (>=50%)	Q9VZS7	Protein hobbit (Bridge-like lipid transfer protein family member 2) (BLTP2)	positive regulation of regulated secretory pathway [GO:1903307]	hit with GO BP
GN001077	Chromosome_1A	2988	8	47	39.0896921017403	0.4123012785696461	92.3076923076923	47	1	94.03669724770643	27	1	90.8	20	1	85.03253796095444	27	1	methylated (>=50%)	Q9VZS7	Protein hobbit (Bridge-like lipid transfer protein family member 2) (BLTP2)	positive regulation of regulated secretory pathway [GO:1903307]	hit with GO BP
GN001078	Chromosome_1A	3252	8	36	36.931119311193115	0.32932757223872533	90.21421616358325	36	1	89.14858096828047	12	1	90.65292096219932	24	1	87.00305810397553	16	0.9375	methylated (>=50%)	Q14667	Bridge-like lipid transfer protein family member 2 (Antigen MLAA-22) (Breast cancer-overexpressed gene 1 protein) (Protein hobbit homolog)	NA	hit, no GO BP
GN006129	Chromosome_1A	5909	7	138	37.50211541716026	0.6642489705648758	77.83258594917788	137	0.8905109489051095	79.71479500891266	54	0.9259259259259259	76.47361647361647	83	0.8674698795180723	1.6055045871559632	35	0	methylated (>=50%)	Q4KLI9	F-box/WD repeat-containing protein 5 (F-box and WD-40 domain-containing protein 5)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic nuclear division [GO:0007088]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN001081	Chromosome_1A	7013	6	209	37.13104234992157	0.8646583762993028	0.9097413881222529	199	0	0.6189555125725339	57	0	1.0141706029452626	142	0	0.672182006204757	56	0	unmethylated (<10%)	Q969U6	F-box/WD repeat-containing protein 5 (F-box and WD-40 domain-containing protein 5)	centrosome duplication [GO:0051298]; cilium assembly [GO:0060271]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic nuclear division [GO:0007088]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN006130	Chromosome_1A	1656	1	80	44.44444444444444	0.9786149584487535	1.0048381094157053	80	0	1.0048381094157053	80	0	NA	NA	NA	1.0153946937438585	60	0	unmethylated (<10%)	F7H9X2	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN006131	Chromosome_1A	6490	3	145	37.10323574730354	0.6518379676481121	1.3970382788488405	144	0	1.1728395061728396	40	0	1.4626218851570965	104	0	1.0815822002472189	68	0	unmethylated (<10%)	Q18120	TWiK family of potassium channels protein 18	locomotion [GO:0040011]; muscle contraction [GO:0006936]; potassium ion transport [GO:0006813]	hit with GO BP
GN006132	Chromosome_1A	13047	20	182	35.91630259829846	0.4332484979874336	80.29148409220804	176	0.8920454545454546	72.85637727759914	72	0.8333333333333334	84.39255099024534	104	0.9326923076923077	0.37891836031691356	54	0	methylated (>=50%)	Q2KHM9	Protein moonraker (MNR) (OFD1- and FOPNL-interacting protein)	centriole replication [GO:0007099]; cilium assembly [GO:0060271]; cytosolic ciliogenesis [GO:0061824]; protein localization to centrosome [GO:0071539]	hit with GO BP
GN001085	Chromosome_1A	314	1	8	40.445859872611464	0.6295739348370928	0.5361930294906166	8	0	0.5361930294906166	8	0	NA	NA	NA	0.77007700770077	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001095	Chromosome_1A	65395	51	1890	36.137319366924075	0.8852580311260255	2.915048097211552	1830	0.004918032786885246	0.7302264522481129	251	0	3.246955589624699	1579	0.005699810006333122	0.7102993404363267	48	0	unmethylated (<10%)	Q9UKP5	A disintegrin and metalloproteinase with thrombospondin motifs 6 (ADAM-TS 6) (ADAM-TS6) (ADAMTS-6) (EC 3.4.24.-)	extracellular matrix organization [GO:0030198]; proteolysis [GO:0006508]	hit with GO BP
GN001096	Chromosome_1A	10483	7	245	35.61003529523991	0.737582206139973	2.028012839217975	243	0	0.5982905982905983	25	0	2.1614292550646037	218	0	2.6014245896562405	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006134	Chromosome_1A	2925	10	79	36.78632478632478	0.8218542269075234	0.5233219567690558	79	0	0.6391632771644393	36	0	0.4487658937920718	43	0	2.7938342967244703	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006135	Chromosome_1A	1678	2	79	45.17282479141836	0.9254473230429835	0.5895900506678949	77	0	0.5880121396054628	75	0	0.6430868167202572	2	0	0.5209338221107467	19	0	unmethylated (<10%)	P48548	G protein-activated inward rectifier potassium channel 4 (GIRK-4) (Cardiac inward rectifier) (CIR) (Heart KATP channel) (Inward rectifier K(+) channel Kir3.4) (KATP-1) (Potassium channel, inwardly rectifying subfamily J member 5)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; potassium ion import across plasma membrane [GO:1990573]; potassium ion transmembrane transport [GO:0071805]; regulation of heart rate by cardiac conduction [GO:0086091]	hit with GO BP
GN006136	Chromosome_1A	1735	2	62	41.72910662824207	0.8211763807778922	0.425531914893617	62	0	0.49813200498132004	56	0	0	6	0	0.6756756756756757	52	0	unmethylated (<10%)	P48545	G protein-activated inward rectifier potassium channel 4 (GIRK-4) (Cardiac inward rectifier) (CIR) (Heart KATP channel) (Inward rectifier K(+) channel Kir3.4) (KATP-1) (Potassium channel, inwardly rectifying subfamily J member 5)	membrane repolarization during atrial cardiac muscle cell action potential [GO:0098914]; potassium ion import across plasma membrane [GO:1990573]; potassium ion transmembrane transport [GO:0071805]; regulation of heart rate by cardiac conduction [GO:0086091]	hit with GO BP
GN001100	Chromosome_1A	26299	15	287	36.47286969086277	0.3437522259282314	89.14888985633435	284	0.9647887323943662	93.12714776632302	20	1	88.87985126655822	264	0.9621212121212122	26.574119980168568	33	0.2727272727272727	methylated (>=50%)	A6QQ71	Inactive peptidyl-prolyl cis-trans isomerase FKBP6 (Inactive PPIase FKBP6) (36 kDa FK506-binding protein) (FK506-binding protein 6) (FKBP-6) (Immunophilin FKBP36)	meiotic cell cycle [GO:0051321]; piRNA processing [GO:0034587]; protein folding [GO:0006457]; regulatory ncRNA-mediated gene silencing [GO:0031047]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN001101	Chromosome_1A	32952	11	542	37.03872299101724	0.4797567453831968	83.79577439179606	434	0.9516129032258065	95.83333333333333	23	1	83.3377373447586	411	0.948905109489051	25	33	0.24242424242424243	methylated (>=50%)	Q13867	Bleomycin hydrolase (BH) (BLM hydrolase) (BMH) (EC 3.4.22.40)	L-homocysteine catabolic process [GO:0043418]; protein polyubiquitination [GO:0000209]; proteolysis [GO:0006508]; response to toxic substance [GO:0009636]	hit with GO BP
GN006137	Chromosome_1A	531	2	7	35.781544256120526	0.41971544715447157	0	7	0	0	2	0	0	5	0	0.3804347826086957	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006138	Chromosome_1A	1190	3	43	38.65546218487395	0.9739431660290451	0.6381620931716656	43	0	0.6756756756756757	41	0	0	2	0	0.896414342629482	46	0	unmethylated (<10%)	A8TX70	Collagen alpha-5(VI) chain (Collagen alpha-1(XXIX) chain) (von Willebrand factor A domain-containing protein 4)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN006139	Chromosome_1A	938	2	33	38.37953091684435	0.962979094076655	0.19175455417066156	33	0	0.1998001998001998	32	0	0	1	0	1.8360375747224595	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006140	Chromosome_1A	1029	2	23	35.95724003887269	0.7014314928425358	1.3409961685823755	23	0	1.0781671159029649	7	0	1.4225941422594142	16	0	0.4975124378109453	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006141	Chromosome_1A	808	2	19	36.50990099009901	0.7099519052904181	0.6359300476947536	19	0	0.8583690987124464	10	0	0.5050505050505051	9	0	0.9024252679075014	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006142	Chromosome_1A	790	2	19	36.58227848101266	0.7234432234432234	1.1976047904191616	17	0	1.7167381974248928	8	0	0.9195402298850575	9	0	1.382063882063882	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006143	Chromosome_1A	489	1	14	41.513292433537835	0.669208211143695	0.6469500924214417	14	0	0.6469500924214417	14	0	NA	NA	NA	0.6086427267194157	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006144	Chromosome_1A	17238	6	507	35.06207216614457	0.9573154621775838	0.736806672401541	504	0	0.4707728520988623	59	0	0.7648420704481561	445	0	0.5103487383045081	59	0	unmethylated (<10%)	P46197	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN006145	Chromosome_1A	408	1	13	41.911764705882355	0.7327991157778392	0.9063444108761329	13	0	0.9063444108761329	13	0	NA	NA	NA	0.3814147018030513	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000984	Chromosome_1A	5052	8	32	31.88836104513064	0.24959395283059652	0.3996003996003996	32	0	0.5649717514124294	7	0	0.3640776699029126	25	0	0.8706868752015479	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006146	Chromosome_1A	2425	5	17	33.27835051546392	0.2532528166504896	2.8846153846153846	6	0	9.090909090909092	3	0	0	3	0	10.834425513324597	89	0.06741573033707865	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000985	Chromosome_1A	573	3	7	32.80977312390925	0.4642361111111111	1.9607843137254901	7	0	3.401360544217687	2	0	1.3774104683195592	5	0	3.3	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000986	Chromosome_1A	324	1	6	40.74074074074074	0.46153846153846156	0.34843205574912894	6	0	0.34843205574912894	6	0	NA	NA	NA	0.548159749412686	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006148	Chromosome_1A	1074	1	15	41.80633147113594	0.3604026845637584	0.5008347245409015	15	0	0.5008347245409015	15	0	NA	NA	NA	0.8842443729903537	47	0	unmethylated (<10%)	Q9FGH2	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 (Protein ORGAN BOUNDARY 5)	mRNA transcription [GO:0009299]; post-embryonic plant morphogenesis [GO:0090698]	hit with GO BP
GN000981	Chromosome_1A	313	2	6	35.78274760383387	0.6147299509001637	0.31446540880503143	6	0	0.31446540880503143	6	0	NA	NA	NA	1.7079419299743808	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000980	Chromosome_1A	165	1	6	47.27272727272727	0.6513157894736842	0	6	0	0	6	0	NA	NA	NA	0.7596685082872928	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000979	Chromosome_1A	208	2	3	32.21153846153846	0.5621621621621622	0.5747126436781609	3	0	0.5747126436781609	3	0	NA	NA	NA	0.36523009495982467	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006149	Chromosome_1A	282	1	2	37.94326241134752	0.1970649895178197	0	1	0	0	1	0	NA	NA	NA	0.4434589800443459	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006150	Chromosome_1A	1038	3	28	38.34296724470135	0.7354251012145749	0.4142502071251036	28	0	0.4920049200492005	21	0	0.25380710659898476	7	0	1.2589928057553956	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006151	Chromosome_1A	1129	3	25	38.352524357838796	0.6024289251259285	0.5766062602965404	25	0	0.5300353356890459	14	0	0.6172839506172839	11	0	0.8846657929226737	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006152	Chromosome_1A	582	1	22	42.09621993127148	0.8622222222222222	0.6085192697768763	22	0	0.6085192697768763	22	0	NA	NA	NA	0.8232235701906413	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006153	Chromosome_1A	384	1	9	43.489583333333336	0.5052631578947369	0.7874015748031497	9	0	0.7874015748031497	9	0	NA	NA	NA	1.1254551473022179	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006154	Chromosome_1A	1991	6	48	34.6559517830236	0.8042481212498632	0.45420136260408783	48	0	0.4697286012526096	38	0	0.4132231404958678	10	0	0.5625879043600562	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005727	Chromosome_1A	2510	4	17	34.50199203187251	0.22770813655017103	44.26315789473684	17	0.4117647058823529	40.05655042412818	11	0.36363636363636365	49.582836710369484	6	0.5	63.768115942028984	6	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006155	Chromosome_1A	980	2	12	35.10204081632653	0.4019138755980861	63.94148020654045	12	1	62.9277566539924	6	1	64.77987421383648	6	1	63.28776258752918	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006156	Chromosome_1A	2310	2	22	39.004329004329	0.2563326574463578	95.51724137931035	14	1	95.52845528455285	10	1	95.45454545454545	4	1	71.60493827160494	7	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006157	Chromosome_1A	3314	6	97	35.87809293904647	0.9120980144025332	0.8190171793847383	97	0	1.083815028901734	28	0	0.7178354500276091	69	0	0.4657828735220351	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006158	Chromosome_1A	354	1	9	41.24293785310734	0.6144648023143684	0.5309734513274337	9	0	0.5309734513274337	9	0	NA	NA	NA	1.0457987738910928	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006159	Chromosome_1A	3675	6	106	36.19047619047619	0.8828048515174589	0.7469654528478058	106	0	0.5181347150259067	42	0	0.8759124087591241	64	0	0.20202020202020202	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006160	Chromosome_1A	498	1	22	41.566265060240966	1.0281531531531531	0.15527950310559005	22	0	0.15527950310559005	22	0	NA	NA	NA	0.5410628019323671	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006161	Chromosome_1A	2628	2	69	35.4261796042618	0.8391503540191587	2.1156138259833135	67	0	0.35714285714285715	19	0	2.467811158798283	48	0	0.3813155386081983	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006162	Chromosome_1A	429	1	17	46.386946386946384	0.7408573750507924	0.8042895442359249	17	0	0.8042895442359249	17	0	NA	NA	NA	2.687962602259447	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006163	Chromosome_1A	567	1	9	43.5626102292769	0.3345790715971676	0.37735849056603776	9	0	0.37735849056603776	9	0	NA	NA	NA	1.8729641693811074	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006170	Chromosome_1A	687	1	24	36.68122270742358	1.0395964691046657	0.5928853754940712	24	0	0.5928853754940712	24	0	NA	NA	NA	0.6185567010309279	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006164	Chromosome_1A	3263	2	92	35.6114005516396	0.8964901435538155	0.39783577339274345	92	0	0.21052631578947367	22	0	0.43119610048743906	70	0	0.37154989384288745	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006165	Chromosome_1A	402	1	15	43.28358208955224	0.8034643570952699	0.17699115044247787	15	0	0.17699115044247787	15	0	NA	NA	NA	0.5221932114882507	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006166	Chromosome_1A	414	1	12	41.30434782608695	0.6824175824175824	0.6869479882237488	12	0	0.6869479882237488	12	0	NA	NA	NA	0.5901753167852803	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006167	Chromosome_1A	1638	4	48	37.60683760683761	0.8302867099635672	0.2457002457002457	34	0	0.3694581280788177	23	0	0	11	0	0.37637521713954836	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002918	Chromosome_1A	485	2	11	42.88659793814433	0.4936615156842787	0	4	0	0	3	0	0	1	0	0.7216208714959755	69	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001010	Chromosome_1A	429	1	18	46.85314685314685	0.7660714285714286	0	18	0	0	18	0	NA	NA	NA	0.4082914572864322	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006169	Chromosome_1A	357	1	10	40.33613445378151	0.6952288218111002	0.6765899864682002	10	0	0.6765899864682002	10	0	NA	NA	NA	0.5115089514066496	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001017	Chromosome_1A	1357	2	42	38.467207074428885	0.8367074298633234	0.49575070821529743	34	0	0.8810572687224669	21	0	0.13679890560875513	13	0	0.5659121171770972	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001008	Chromosome_1A	687	1	24	37.26346433770014	1.009366391184573	0.6369426751592356	24	0	0.6369426751592356	24	0	NA	NA	NA	0.7883326763894364	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006171	Chromosome_1A	660	1	25	39.84848484848485	0.9545296771954183	0.2094240837696335	25	0	0.2094240837696335	25	0	NA	NA	NA	0.6065857885615251	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006172	Chromosome_1A	29601	17	443	36.89740211479342	0.44065519808248477	74.34217058881939	437	0.9450800915331807	68.04062126642772	34	0.9705882352941176	74.71179789060584	403	0.9429280397022333	0.5658129839189994	64	0	methylated (>=50%)	Q9UJX3	Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; brain development [GO:0007420]; cell division [GO:0051301]; positive regulation of mitotic metaphase/anaphase transition [GO:0045842]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of meiotic cell cycle [GO:0051445]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN006173	Chromosome_1A	1521	1	63	43.19526627218935	0.8947058823529411	0.8269018743109151	58	0	0.8269018743109151	58	0	NA	NA	NA	0.7994670219853431	47	0	unmethylated (<10%)	Q9BY10	Solute carrier family 46 member 2 (Thymic stromal cotransporter homolog)	cyclic-GMP-AMP transmembrane import across plasma membrane [GO:0140361]; positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway [GO:0070430]; transmembrane transport [GO:0055085]	hit with GO BP
GN001005	Chromosome_1A	6968	8	89	38.04535017221584	0.3558631295655517	83.26739202110122	84	0.8928571428571429	71.90839694656489	15	0.8	84.64239512104972	69	0.9130434782608695	0.4276550249465431	37	0	methylated (>=50%)	Q5FW48	Aspartate dehydrogenase domain-containing protein	NAD+ biosynthetic process [GO:0009435]	hit with GO BP
GN001004	Chromosome_1A	16943	14	230	33.41793070884731	0.4882441595416966	86.4497999618975	228	0.9385964912280702	88.73456790123457	50	0.98	85.93055880289923	178	0.9269662921348315	30.479724357275376	46	0.43478260869565216	methylated (>=50%)	A0AUT1	Trichoplein keratin filament-binding protein (Protein TCHP)	apoptotic process [GO:0006915]	hit with GO BP
GN006175	Chromosome_1A	975	3	24	41.94871794871795	0.5607476635514018	2.1447721179624666	13	0	2.4464831804281344	12	0	0	1	0	1.0139764318991504	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001002	Chromosome_1A	6447	3	214	38.65363735070576	0.891554306208501	11.240682856455878	203	0	12.002824193927983	101	0	10.44482673875645	102	0	0.4921259842519685	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001001	Chromosome_1A	3268	6	39	31.57894736842105	0.4786821705426357	90.32951289398281	39	1	90.04524886877829	16	1	90.46121593291404	23	1	92.13184476342371	30	1	methylated (>=50%)	Q5ZI89	Trafficking protein particle complex subunit 11	NA	hit, no GO BP
GN001000	Chromosome_1A	26537	23	431	36.484907864491085	0.4901456588942383	92.23649337410805	426	0.9976525821596244	93.00817592331548	67	0.9850746268656716	92.10601582610354	359	1	22.03760384783559	33	0.12121212121212122	methylated (>=50%)	Q5ZI89	Trafficking protein particle complex subunit 11	NA	hit, no GO BP
GN000999	Chromosome_1A	12372	6	195	32.94536049143227	0.5810146117032344	69.53002395308499	195	0.6512820512820513	36.41975308641975	18	0.2777777777777778	71.40239113360677	177	0.6892655367231638	93.9877627028465	48	1	methylated (>=50%)	Q6NW29	RWD domain-containing protein 4 (Protein FAM28A)	NA	hit, no GO BP
GN000998	Chromosome_1A	192	1	10	49.479166666666664	1.0031347962382444	0.18214936247723132	10	0	0.18214936247723132	10	0	NA	NA	NA	0.9629629629629629	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000997	Chromosome_1A	207	1	7	48.792270531400966	0.575	1.3888888888888888	6	0	1.3888888888888888	6	0	NA	NA	NA	0.3198976327575176	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000996	Chromosome_1A	1557	1	60	40.65510597302505	0.9332667332667333	1.1516314779270633	60	0	1.1516314779270633	60	0	NA	NA	NA	0.7157894736842105	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000995	Chromosome_1A	2376	3	60	39.68855218855219	0.6414686825053996	1.8577494692144374	54	0	0.933955970647098	49	0	5.454545454545454	5	0	0.437636761487965	57	0	unmethylated (<10%)	P41437	E3 ubiquitin-protein ligase IAP-3 (EC 2.3.2.27) (IAP-3) (RING-type E3 ubiquitin transferase IAP-3)	symbiont-mediated perturbation of host ubiquitin-like protein modification [GO:0039648]	hit with GO BP
GN000994	Chromosome_1A	768	1	16	44.661458333333336	0.4177886576907385	0.966183574879227	10	0	0.966183574879227	10	0	NA	NA	NA	2.264019505398816	59	0	unmethylated (<10%)	Q13489	Baculoviral IAP repeat-containing protein 3 (EC 2.3.2.27) (Apoptosis inhibitor 2) (API2) (Cellular inhibitor of apoptosis 2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (hIAP-1) (hIAP1) (RING finger protein 49) (RING-type E3 ubiquitin transferase BIRC3) (TNFR2-TRAF-signaling complex protein 1)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; spermatogenesis [GO:0007283]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN000993	Chromosome_1A	753	1	17	43.02788844621514	0.48793596340766154	0.5249343832020997	16	0	0.5249343832020997	16	0	NA	NA	NA	0.49455984174085066	49	0	unmethylated (<10%)	Q13489	Baculoviral IAP repeat-containing protein 3 (EC 2.3.2.27) (Apoptosis inhibitor 2) (API2) (Cellular inhibitor of apoptosis 2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (hIAP-1) (hIAP1) (RING finger protein 49) (RING-type E3 ubiquitin transferase BIRC3) (TNFR2-TRAF-signaling complex protein 1)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; spermatogenesis [GO:0007283]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN000992	Chromosome_1A	12930	12	281	35.29002320185615	0.6999988440375456	84.90900795863537	274	0.8905109489051095	72.94469357249626	43	0.7209302325581395	86.26410835214448	231	0.922077922077922	0.7917656373713381	41	0	methylated (>=50%)	Q6NVR9	ATPase family AAA domain-containing protein 3	mitochondrion organization [GO:0007005]	hit with GO BP
GN006180	Chromosome_1A	832	2	19	40.14423076923077	0.5768290457945631	71.45085803432137	19	1	68.77662811929397	13	1	87.14285714285714	6	1	73.53159851301115	49	0.9795918367346939	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006181	Chromosome_1A	237	1	23	56.962025316455694	1.1996038732394365	0	23	0	0	23	0	NA	NA	NA	0.5584192439862543	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006190	Chromosome_1A	327	1	25	48.62385321100918	1.3318670576735092	0.9208103130755064	25	0	0.9208103130755064	25	0	NA	NA	NA	1.2997562956945572	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000989	Chromosome_1A	573	1	19	39.61605584642234	0.8498829039812646	0.4784688995215311	19	0	0.4784688995215311	19	0	NA	NA	NA	1.6907361747094047	65	0	unmethylated (<10%)	Q49LX5	Somatostatin receptor type 1 (SS-1-R) (SS1-R) (SS1R)	NA	hit, no GO BP
GN006182	Chromosome_1A	7723	2	127	36.08701281885278	0.5051091770522196	74.28115015974441	104	0.9423076923076923	80.28985507246377	14	0.8571428571428571	73.67340955731457	90	0.9555555555555556	60.04434589800444	31	0.7741935483870968	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006183	Chromosome_1A	2641	3	39	32.563422945853844	0.5637880355354122	89.4927536231884	39	1	87.93456032719837	11	1	90.14567266495287	28	1	92.57142857142857	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006184	Chromosome_1A	327	1	24	49.235474006116206	1.2362948960302458	0.8658008658008658	12	0	0.8658008658008658	12	0	NA	NA	NA	4.462571976967371	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006200	Chromosome_1A	489	2	27	43.558282208588956	1.1860402443406397	1.10803324099723	15	0	1.10803324099723	15	0	NA	NA	NA	0.46153846153846156	84	0	unmethylated (<10%)	P97714	Alpha-1D adrenergic receptor (Alpha-1A adrenergic receptor) (Alpha-1D adrenoreceptor) (Alpha-1D adrenoceptor)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; cell-cell signaling [GO:0007267]; negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure [GO:0001986]; neuron-glial cell signaling [GO:0150099]; norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure [GO:0001994]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of vasoconstriction [GO:0045907]; regulation of blood pressure [GO:0008217]	hit with GO BP
GN000960	Chromosome_1A	519	1	34	48.747591522158	1.1174012158054711	0.494641384995878	34	0	0.494641384995878	34	0	NA	NA	NA	0.6344890097439384	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000972	Chromosome_1A	387	1	24	47.02842377260982	1.1414526238171316	0.37453183520599254	24	0	0.37453183520599254	24	0	NA	NA	NA	2.0500205002050023	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006185	Chromosome_1A	519	1	33	47.01348747591522	1.168360734020056	1.169064748201439	33	0	1.169064748201439	33	0	NA	NA	NA	0.5284426484302145	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006186	Chromosome_1A	969	1	11	36.53250773993808	0.3540725484985384	0.5284015852047557	11	0	0.5284015852047557	11	0	NA	NA	NA	0.922266139657444	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006187	Chromosome_1A	606	1	11	39.76897689768977	0.46042271031910487	0.5167958656330749	11	0	0.5167958656330749	11	0	NA	NA	NA	1.680672268907563	20	0	unmethylated (<10%)	Q9H611	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1) (PIF1/RRM3 DNA helicase-like protein)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; negative regulation of telomere maintenance via telomerase [GO:0032211]; protein-DNA-RNA complex disassembly [GO:0001117]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN006188	Chromosome_1A	2320	3	20	35.08620689655172	0.280858069827127	0.3325942350332594	20	0	0.25773195876288657	9	0	0.38910505836575876	11	0	5.3061224489795915	24	0	unmethylated (<10%)	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN006189	Chromosome_1A	2856	2	40	38.30532212885154	0.38193434500466383	3.749191984486102	40	0	4.226415094339623	36	0	0.9009009009009009	4	0	0.32930845225027444	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000967	Chromosome_1A	651	1	12	43.16436251920123	0.39574468085106385	28.297055057618437	12	0	28.297055057618437	12	0	NA	NA	NA	4.124457308248915	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN000966	Chromosome_1A	1206	3	5	33.74792703150912	0.14561700072446268	1.4492753623188406	5	0	1.9607843137254901	4	0	0	1	0	1.799034664326459	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000965	Chromosome_1A	402	1	3	39.30348258706468	0.1935173299101412	1.1904761904761905	3	0	1.1904761904761905	3	0	NA	NA	NA	0.44543429844098	73	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000964	Chromosome_1A	327	1	25	48.62385321100918	1.3211053652230123	0.5357142857142857	25	0	0.5357142857142857	25	0	NA	NA	NA	0.9523809523809523	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006191	Chromosome_1A	519	1	35	48.16955684007707	1.1752717391304348	1.4492753623188406	35	0	1.4492753623188406	35	0	NA	NA	NA	1.0479867622724766	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000962	Chromosome_1A	207	1	9	45.410628019323674	0.853021978021978	0.33003300330033003	9	0	0.33003300330033003	9	0	NA	NA	NA	0.6903353057199211	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006192	Chromosome_1A	225	1	6	43.55555555555556	0.5739795918367347	0	6	0	0	6	0	NA	NA	NA	0.5599626691553896	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000955	Chromosome_1A	1281	1	44	40.04683840749414	0.857429718875502	0.8134490238611713	44	0	0.8134490238611713	44	0	NA	NA	NA	0.4782400765184122	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006193	Chromosome_1A	519	1	30	48.554913294797686	0.9948246118458884	1.3029315960912051	23	0	1.3029315960912051	23	0	NA	NA	NA	0.5952380952380952	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006194	Chromosome_1A	12850	8	235	37.27626459143969	0.5412505607873804	79.27121290994273	184	0.8586956521739131	64.27038626609442	12	0.75	80.8832007379223	172	0.8662790697674418	80.4	12	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006195	Chromosome_1A	450	1	2	42	0.10160307067058026	20	2	0	20	2	0	NA	NA	NA	10.272750446087178	17	0	NA	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN000958	Chromosome_1A	718	3	2	36.211699164345404	0.08558316943798797	3.5398230088495577	1	0	3.5398230088495577	1	0	NA	NA	NA	1.2280701754385965	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006197	Chromosome_1A	2508	1	82	39.99202551834131	0.8178933051231676	1.4705882352941178	46	0	1.4705882352941178	46	0	NA	NA	NA	0.4830917874396135	7	0	unmethylated (<10%)	A4WFX9	3'-5' ssDNA/RNA exonuclease TatD (EC 3.1.11.-) (EC 3.1.13.-) (DNase TatD)	NA	hit, no GO BP
GN006198	Chromosome_1A	519	1	30	48.16955684007707	1.0091386350379157	1.3100436681222707	9	0	1.3100436681222707	9	0	NA	NA	NA	0.6887052341597796	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000949	Chromosome_1A	573	1	19	39.61605584642234	0.851078799249531	0.8403361344537815	19	0	0.8403361344537815	19	0	NA	NA	NA	5.194805194805195	65	0	unmethylated (<10%)	Q49LX5	Somatostatin receptor type 1 (SS-1-R) (SS1-R) (SS1R)	NA	hit, no GO BP
GN000950	Chromosome_1A	516	1	31	47.674418604651166	1.0629984051036683	0.7676560900716479	31	0	0.7676560900716479	31	0	NA	NA	NA	0.5376344086021505	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000951	Chromosome_1A	1199	3	7	34.862385321100916	0.19221344326119316	7.291666666666667	7	0	2.9411764705882355	3	0	10.114503816793894	4	0	4.385185185185185	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000952	Chromosome_1A	645	1	6	35.1937984496124	0.3115942028985507	0.2881844380403458	6	0	0.2881844380403458	6	0	NA	NA	NA	12.247474747474747	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000953	Chromosome_1A	489	2	27	43.76278118609407	1.173287123433751	0.6024096385542169	8	0	0.6024096385542169	8	0	NA	NA	NA	0.5591054313099042	68	0	unmethylated (<10%)	P97714	Alpha-1D adrenergic receptor (Alpha-1A adrenergic receptor) (Alpha-1D adrenoreceptor) (Alpha-1D adrenoceptor)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; cell-cell signaling [GO:0007267]; negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure [GO:0001986]; neuron-glial cell signaling [GO:0150099]; norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure [GO:0001994]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of vasoconstriction [GO:0045907]; regulation of blood pressure [GO:0008217]	hit with GO BP
GN006201	Chromosome_1A	1455	1	53	40.27491408934708	0.8995310750279956	0.6914433880726015	53	0	0.6914433880726015	53	0	NA	NA	NA	0.3702457085156513	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006202	Chromosome_1A	312	1	19	54.166666666666664	0.8337552742616033	0.5524861878453039	13	0	0.5524861878453039	13	0	NA	NA	NA	1.408450704225352	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000956	Chromosome_1A	321	1	16	51.71339563862929	0.7781818181818182	0.45248868778280543	10	0	0.45248868778280543	10	0	NA	NA	NA	3.4576888080072794	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006203	Chromosome_1A	813	1	24	39.11439114391144	0.8111074160292651	1.0995723885155773	24	0	1.0995723885155773	24	0	NA	NA	NA	2.7922561429635144	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000945	Chromosome_1A	424	2	1	41.509433962264154	0.06091954022988506	0	1	0	0	1	0	NA	NA	NA	6.7368421052631575	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000944	Chromosome_1A	378	1	17	39.41798941798942	1.451219512195122	0.9416195856873822	17	0	0.9416195856873822	17	0	NA	NA	NA	0.7220216606498195	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006205	Chromosome_1A	321	1	12	52.33644859813084	1.1550224887556222	1.4619883040935673	12	0	1.4619883040935673	12	0	NA	NA	NA	0.6775832862789385	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006206	Chromosome_1A	1958	2	58	35.801838610827375	0.9264631499942894	1.4782261286456253	58	0	0.468384074941452	13	0	1.6859344894026975	45	0	0.7682976142337242	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006207	Chromosome_1A	519	2	13	38.34296724470135	0.6962848297213622	0.6578947368421053	13	0	0.74487895716946	12	0	0	1	0	0.22202486678507993	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006208	Chromosome_1A	651	1	33	44.086021505376344	1.0488721804511278	1.5527950310559007	33	0	1.5527950310559007	33	0	NA	NA	NA	0.488171235448742	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006209	Chromosome_1A	651	1	27	45.16129032258065	0.8231630215894722	0.2881844380403458	27	0	0.2881844380403458	27	0	NA	NA	NA	0.623624358033749	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006210	Chromosome_1A	2000	3	92	43.4	0.9832684055554665	0.7751937984496124	84	0	0.8676789587852495	55	0	0.6172839506172839	29	0	0.700770847932726	55	0	unmethylated (<10%)	P9WEL6	Ava biosynthesis cluster protein O	NA	hit, no GO BP
GN000938	Chromosome_1A	13803	9	235	37.745417662826924	0.4780097013552896	86.04795050270688	229	0.9432314410480349	69.29046563192905	34	0.8235294117647058	88.76505482653245	195	0.9641025641025641	0.5524861878453039	45	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000937	Chromosome_1A	285	1	0	57.54385964912281	0	NA	0	NA	NA	NA	NA	NA	NA	NA	71.65775401069519	8	1	NA	NA	NA	NA	no Swiss-Prot hit
GN000936	Chromosome_1A	606	2	8	37.788778877887786	0.38752997601918465	84.97109826589596	8	1	85.3932584269663	4	1	84.52380952380952	4	1	84.18141592920354	31	0.967741935483871	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006212	Chromosome_1A	279	1	23	52.32974910394265	1.204165884781385	93.46210995542347	23	1	93.46210995542347	23	1	NA	NA	NA	85.47129695251594	51	0.9607843137254902	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006213	Chromosome_1A	1385	2	31	54.0072202166065	0.30705800739485223	76.33136094674556	20	0.9	80	13	1	68.51851851851852	7	0.7142857142857143	87.43718592964824	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006214	Chromosome_1A	14543	8	247	38.18331843498591	0.46841011418807127	78.47640030505889	243	0.9218106995884774	85.53888130968622	35	0.9714285714285714	77.47460087082729	208	0.9134615384615384	37.08133971291866	12	0.25	methylated (>=50%)	O95407	Tumor necrosis factor receptor superfamily member 6B (Decoy receptor 3) (DcR3) (Decoy receptor for Fas ligand) (M68)	negative regulation of apoptotic process [GO:0043066]; negative regulation of inflammatory response [GO:0050728]	hit with GO BP
GN000933	Chromosome_1A	10786	6	133	35.98182829593918	0.3809647487478556	85.43504818786481	120	0.975	93.08176100628931	19	1	84.71252414202942	101	0.9702970297029703	87.74002954209749	23	1	methylated (>=50%)	Q5ZL00	ER membrane protein complex subunit 1	protein insertion into ER membrane by stop-transfer membrane-anchor sequence [GO:0045050]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN000932	Chromosome_1A	12549	9	243	36.353494302334845	0.5865101437902462	88.96306186025812	239	0.9623430962343096	77.35961768219833	51	0.8823529411764706	90.60806233062331	188	0.9840425531914894	44.52705493597687	34	0.5588235294117647	methylated (>=50%)	Q6PDJ6	F-box only protein 42	NA	hit, no GO BP
GN000931	Chromosome_1A	573	1	9	41.53577661431065	0.37587463556851314	85.07462686567165	9	1	85.07462686567165	9	1	NA	NA	NA	4.4598612487611495	28	0	methylated (>=50%)	Q5EAR6	Vacuolar ATPase assembly protein VMA22 (Coiled-coil domain-containing protein 115)	intracellular iron ion homeostasis [GO:0006879]; vacuolar proton-transporting V-type ATPase complex assembly [GO:0070072]	hit with GO BP
GN006216	Chromosome_1A	996	1	51	42.46987951807229	1.140919096177171	1.0391686650679457	51	0	1.0391686650679457	51	0	NA	NA	NA	0.35374149659863946	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000929	Chromosome_1A	951	2	12	42.376445846477395	0.2941540364986081	78.93569844789357	12	0.9166666666666666	89.78102189781022	5	1	74.20382165605096	7	0.8571428571428571	68.58080393765381	26	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000928	Chromosome_1A	10644	12	134	35.963923337091316	0.40171694127587665	84.7233691164327	134	0.9626865671641791	90.38146501287152	76	0.9736842105263158	78.97240723120838	58	0.9482758620689655	57.42496050552923	20	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006217	Chromosome_1A	216	1	6	53.7037037037037	0.3853702051739518	86.20689655172414	6	1	86.20689655172414	6	1	NA	NA	NA	78.34549878345499	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006218	Chromosome_1A	5273	8	178	38.2135406789304	0.926024148212168	0.6945516283377065	166	0	0.5573248407643312	58	0	0.7275512157763737	108	0	25.565687267814926	42	0.38095238095238093	unmethylated (<10%)	Q5RCR5	Inactive C-alpha-formylglycine-generating enzyme 2 (Sulfatase-modifying factor 2)	NA	hit, no GO BP
GN006219	Chromosome_1A	53620	20	854	35.606117120477435	0.5083101076756719	84.80764929545963	836	0.9665071770334929	91.19519094766619	56	1	84.45222729419172	780	0.9641025641025641	2.4473147518694764	65	0.015384615384615385	methylated (>=50%)	P21872	Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (GARS) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase); Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART)]	'de novo' IMP biosynthetic process [GO:0006189]; adenine biosynthetic process [GO:0046084]; purine nucleotide biosynthetic process [GO:0006164]	hit with GO BP
GN006220	Chromosome_1A	1232	2	16	36.282467532467535	0.39463463463463466	86.04091456077016	16	0.9375	93.86503067484662	10	1	74.85380116959064	6	0.8333333333333334	93.60119047619048	59	0.9830508474576272	methylated (>=50%)	Q8K2A8	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (EC 2.4.1.258) (Asparagine-linked glycosylation protein 3 homolog) (Dol-P-Man-dependent alpha(1-3)-mannosyltransferase) (Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase) (Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN006221	Chromosome_1A	31892	7	480	33.33124294493917	0.5419243373488346	80.62041046883826	442	0.9117647058823529	81.53846153846153	28	0.8928571428571429	80.5242082271569	414	0.9130434782608695	39.40071556350626	42	0.38095238095238093	methylated (>=50%)	Q92685	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (EC 2.4.1.258) (Asparagine-linked glycosylation protein 3 homolog) (Dol-P-Man-dependent alpha(1-3)-mannosyltransferase) (Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase) (Dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase) (Not56-like protein)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN006222	Chromosome_1A	204	1	2	53.431372549019606	0.20626895854398383	34.81481481481482	2	0	34.81481481481482	2	0	NA	NA	NA	75.88532883642496	33	0.9393939393939394	NA	NA	NA	NA	no Swiss-Prot hit
GN006223	Chromosome_1A	267	1	12	41.57303370786517	1.0787878787878789	0.1976284584980237	12	0	0.1976284584980237	12	0	NA	NA	NA	2.136115250869349	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006224	Chromosome_1A	3204	5	83	34.08239700374532	0.8924042349703855	0.5793226381461676	79	0	0	10	0	0.6467661691542289	69	0	0.4034065441506051	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018497	Chromosome_2A	618	1	10	44.336569579288025	0.3379819524200164	0.2849002849002849	8	0	0.2849002849002849	8	0	NA	NA	NA	0.4166666666666667	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006225	Chromosome_2A	2004	2	54	36.97604790419162	0.7907636097917428	0.3654080389768575	53	0	0.3021148036253776	16	0	0.3886729594669628	37	0	0.5223230941425195	121	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006226	Chromosome_2A	801	1	39	43.07116104868914	1.052385123298747	0.6147540983606558	39	0	0.6147540983606558	39	0	NA	NA	NA	0.3452740612861459	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006227	Chromosome_2A	483	1	0	33.54037267080745	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6457564575645757	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006228	Chromosome_2A	699	1	3	43.91988555078684	0.09932739674118984	0	3	0	0	3	0	NA	NA	NA	1.2468827930174564	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006229	Chromosome_2A	2976	5	139	46.774193548387096	0.8544534801818531	1.503030303030303	139	0	1.0558069381598794	64	0	1.714898177920686	75	0	1.4634146341463414	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006230	Chromosome_2A	35604	9	860	37.63622064936524	0.6828763330716857	4.79995006553898	757	0.009247027741083224	13.039309683604985	33	0	4.5227265395657925	724	0.009668508287292817	0.564121850319669	78	0	unmethylated (<10%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN006231	Chromosome_2A	10755	9	158	37.917247791724776	0.410420832971046	89.25903794442785	155	0.9935483870967742	92.56246368390471	44	1	88.11582545747034	111	0.990990990990991	92.2360248447205	29	1	methylated (>=50%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN006232	Chromosome_2A	801	1	22	38.826466916354555	0.7289650037230082	80.703125	22	1	80.703125	22	1	NA	NA	NA	96.24309392265194	63	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006233	Chromosome_2A	1266	1	29	40.04739336492891	0.5814697497624327	30.545454545454547	29	0.3448275862068966	30.545454545454547	29	0.3448275862068966	NA	NA	NA	13.33605220228385	49	0.12244897959183673	sparse (10-50%)	Q9NWY4	Histone PARylation factor 1	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; regulation of protein ADP-ribosylation [GO:0010835]	hit with GO BP
GN006234	Chromosome_2A	30491	18	444	35.44980486045063	0.4659009347199268	79.37319785802553	424	0.9174528301886793	88.0900822867042	44	1	78.62282369608172	380	0.9078947368421053	9.299719887955183	29	0.06896551724137931	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006235	Chromosome_2A	4437	3	79	38.60716700473293	0.47868653210608253	95.66492146596859	78	1	95.52845528455285	40	1	95.76059850374065	38	1	84.34856175972928	16	0.9375	methylated (>=50%)	Q8WYN3	Cysteine/serine-rich nuclear protein 3 (CSRNP-3) (Protein FAM130A2) (TGF-beta-induced apoptosis protein 2) (TAIP-2)	positive regulation of apoptotic process [GO:0043065]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006236	Chromosome_2A	2526	1	40	40.142517814726844	0.395068679546281	51.959544879898864	38	0.5789473684210527	51.959544879898864	38	0.5789473684210527	NA	NA	NA	56.47504737839545	42	0.5714285714285714	methylated (>=50%)	Q5R5J4	Vacuolar protein sorting-associated protein 53 homolog	endocytic recycling [GO:0032456]; protein targeting to lysosome [GO:0006622]; retrograde transport, endosome to Golgi [GO:0042147]; vesicle-mediated cholesterol transport [GO:0090119]	hit with GO BP
GN006237	Chromosome_2A	9402	15	117	33.95022335673261	0.43570603584720025	94.03964815544178	117	1	93.30568720379146	32	1	94.24860853432283	85	1	89.06510851419031	28	0.9642857142857143	methylated (>=50%)	Q6AX60	Protein PTHB1 (Bardet-Biedl syndrome 9 protein homolog) (Parathyroid hormone-responsive B1 gene protein homolog)	cilium assembly [GO:0060271]	hit with GO BP
GN006238	Chromosome_2A	9163	6	44	34.02815671723235	0.1677607379322053	85.17894736842105	44	1	92	16	1	81.37704918032787	28	1	77.85977859778598	20	1	methylated (>=50%)	Q3SYG4	Protein PTHB1 (Bardet-Biedl syndrome 9 protein) (Parathyroid hormone-responsive B1 gene protein)	cilium assembly [GO:0060271]; fat cell differentiation [GO:0045444]; protein localization to cilium [GO:0061512]	hit with GO BP
GN006239	Chromosome_2A	210	1	0	57.142857142857146	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9767441860465116	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006240	Chromosome_2A	210	1	0	56.666666666666664	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8462104488594555	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006241	Chromosome_2A	264	1	6	40.53030303030303	0.5546218487394958	10	1	0	10	1	0	NA	NA	NA	2.3277467411545625	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006242	Chromosome_2A	765	1	16	45.35947712418301	0.40669856459330145	2.985074626865672	16	0	2.985074626865672	16	0	NA	NA	NA	6.896551724137931	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006243	Chromosome_2A	17133	4	287	35.00262651024339	0.5476700274193042	88.75191864927092	285	0.9473684210526315	89.97429305912597	29	0.8620689655172413	88.6794370204766	256	0.95703125	0.6172839506172839	33	0	methylated (>=50%)	Q5E988	Small ribosomal subunit protein uS7 (40S ribosomal protein S5) [Cleaved into: Small ribosomal subunit protein uS7, N-terminally processed]	ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	hit with GO BP
GN006244	Chromosome_2A	5187	6	134	37.03489492963177	0.7544907449621592	0.565403422982885	134	0	0.7284768211920529	40	0	0.5164878823996821	94	0	1.0067848544539286	69	0	unmethylated (<10%)	P98163	Vitellogenin receptor Yl (Protein yolkless) (Yl)	NA	hit, no GO BP
GN006245	Chromosome_2A	10000	12	76	31.8	0.32470154160601655	80.49886621315193	76	0.9473684210526315	87.61991777067153	35	0.9714285714285714	74.64312546957176	41	0.926829268292683	42.72257672439988	52	0.4230769230769231	methylated (>=50%)	Q8BK03	Mitoguardin 2 (Protein FAM73B)	bone development [GO:0060348]; mitochondrial fusion [GO:0008053]	hit with GO BP
GN006246	Chromosome_2A	2826	3	54	33.05024769992923	0.7032442396313364	0.625	53	0	0.5555555555555556	15	0	0.6481481481481481	38	0	0.4883153121730031	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006247	Chromosome_2A	25067	19	338	34.116567598835125	0.4636992795750623	28.7151624911963	336	0.32142857142857145	55.4421768707483	64	0.625	24.076042035659462	272	0.25	0.5735354362965998	75	0	sparse (10-50%)	P49796	Regulator of G protein signaling 3 (RGP3) (RGS3)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]	hit with GO BP
GN006248	Chromosome_2A	10792	11	182	34.53484062268347	0.5656363662543737	80.74441687344913	131	0.916030534351145	86.88133571854502	36	0.9444444444444444	79.13206955976814	95	0.9052631578947369	56.72358591248666	37	0.5135135135135135	methylated (>=50%)	Q6P618	Adenylate kinase 8 (AK 8) (EC 2.7.4.3) (EC 2.7.4.6) (ATP-AMP transphosphorylase 8)	NA	hit, no GO BP
GN006249	Chromosome_2A	6244	4	99	34.89750160153748	0.521260017809439	79.17750325097529	99	0.8787878787878788	79.1304347826087	14	0.8571428571428571	79.18235610543303	85	0.8823529411764706	11.105150214592275	26	0.11538461538461539	methylated (>=50%)	O57590	Surfeit locus protein 4	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; lipid homeostasis [GO:0055088]; lipoprotein transport [GO:0042953]; regulation of lipid transport [GO:0032368]	hit with GO BP
GN006250	Chromosome_2A	11003	10	76	33.58175043170044	0.2452317482661036	78.96933405915442	75	0.88	83.41307814992025	10	0.9	78.3988533988534	65	0.8769230769230769	11.691259931895573	28	0.10714285714285714	methylated (>=50%)	A6QR06	Transcriptional adapter 1 (Transcriptional adapter 1-like protein)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006251	Chromosome_2A	15399	19	125	33.93077472563154	0.30327396445303784	90.7083716651334	98	1	93.54132457580734	35	1	89.27383592017739	63	1	0.5045408678102926	33	0	methylated (>=50%)	Q9BS26	Endoplasmic reticulum resident protein 44 (ER protein 44) (ERp44) (Thioredoxin domain-containing protein 4)	cell redox homeostasis [GO:0045454]; glycoprotein metabolic process [GO:0009100]; protein folding [GO:0006457]; response to endoplasmic reticulum stress [GO:0034976]; response to unfolded protein [GO:0006986]	hit with GO BP
GN006252	Chromosome_2A	44433	22	943	36.47964350820336	0.6383863027415055	57.029665434555966	934	0.607066381156317	42.277522315390854	165	0.45454545454545453	59.4343158219616	769	0.6397919375812744	85.23489932885906	7	1	methylated (>=50%)	Q9NQV6	PR domain zinc finger protein 10 (PR domain-containing protein 10) (Tristanin)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN006253	Chromosome_2A	24368	12	338	34.59865397242285	0.46585513463128686	84.58582937409626	336	0.9345238095238095	90.77474249888043	39	0.9743589743589743	83.95685417804478	297	0.9292929292929293	0.951335528723015	67	0	methylated (>=50%)	Q14684	Ribosomal RNA processing protein 1 homolog B (RRP1-like protein B)	cellular response to virus [GO:0098586]; host-mediated activation of viral transcription [GO:0043923]; negative regulation of GTPase activity [GO:0034260]; positive regulation of apoptotic process [GO:0043065]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of RNA splicing [GO:0043484]; regulation of transcription by RNA polymerase II [GO:0006357]; rRNA processing [GO:0006364]	hit with GO BP
GN006254	Chromosome_2A	1752	1	60	39.04109589041096	0.8988610322536512	2.386934673366834	60	0	2.386934673366834	60	0	NA	NA	NA	0.7815552950371238	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006255	Chromosome_2A	16881	20	525	37.46815946922575	0.8863721602416326	1.288977751308121	517	0	1.0916374561842763	268	0	1.434699009022334	249	0	0.6426735218508998	58	0	unmethylated (<10%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN006256	Chromosome_2A	10857	16	327	37.10048816431795	0.8761479232990301	1.0002000400080016	145	0	0.9789380005932957	100	0	1.0442260442260443	45	0	4.246794871794871	44	0	unmethylated (<10%)	P15989	Collagen alpha-3(VI) chain	NA	hit, no GO BP
GN006257	Chromosome_2A	513	1	21	41.52046783625731	0.9545454545454546	0.6309148264984227	21	0	0.6309148264984227	21	0	NA	NA	NA	0.6440071556350626	56	0	unmethylated (<10%)	P32018	Collagen alpha-1(XIV) chain (Undulin)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN006258	Chromosome_2A	396	1	13	42.92929292929293	0.715	1.1019283746556474	13	0	1.1019283746556474	13	0	NA	NA	NA	0.41353383458646614	49	0	unmethylated (<10%)	Q60847	Collagen alpha-1(XII) chain	endodermal cell differentiation [GO:0035987]	hit with GO BP
GN006259	Chromosome_2A	570	1	15	40.87719298245614	0.6428571428571429	0	15	0	0	15	0	NA	NA	NA	0.6398862424457874	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006260	Chromosome_2A	1041	1	30	44.860710854947165	0.581455967231428	0.5102040816326531	30	0	0.5102040816326531	30	0	NA	NA	NA	1.260835303388495	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006261	Chromosome_2A	1203	2	24	35.910224438902745	0.6318415581573477	13.902681231380338	24	0	10.486322188449847	17	0	20.34383954154728	7	0	4.8004042445679636	67	0	sparse (10-50%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN006262	Chromosome_2A	30514	21	560	34.58084813528217	0.6171066987761614	26.54297999119748	528	0.2746212121212121	35.06339814032122	118	0.4067796610169492	24.409448818897637	410	0.23658536585365852	8.61568247821878	42	0	sparse (10-50%)	P70211	Netrin receptor DCC (Tumor suppressor protein DCC)	anterior/posterior axon guidance [GO:0033564]; axon guidance [GO:0007411]; cell-cell adhesion [GO:0098609]; dorsal/ventral axon guidance [GO:0033563]; neuron migration [GO:0001764]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of neuron projection development [GO:0010976]; postsynaptic modulation of chemical synaptic transmission [GO:0099170]; spinal cord ventral commissure morphogenesis [GO:0021965]	hit with GO BP
GN006263	Chromosome_2A	4316	4	17	51.390176088971266	0.06083081502116211	6.802721088435374	17	0	10.695187165775401	10	0	0	7	0	6.557377049180328	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006264	Chromosome_2A	8016	6	129	34.930139720558884	0.5289440852723766	78.490990990991	109	0.9908256880733946	93.39622641509433	16	1	76.21177149451817	93	0.989247311827957	61.14432109308284	45	0.4222222222222222	methylated (>=50%)	P41367	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial (MCAD) (EC 1.3.8.7)	carnitine biosynthetic process [GO:0045329]; carnitine metabolic process, CoA-linked [GO:0019254]; fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; glycogen biosynthetic process [GO:0005978]; medium-chain fatty acid catabolic process [GO:0051793]; regulation of gluconeogenesis [GO:0006111]	hit with GO BP
GN006265	Chromosome_2A	461	2	15	40.3470715835141	0.8003472222222222	2.0833333333333335	15	0	1.633393829401089	13	0	4.132231404958677	2	0	36.118072960178225	65	0.26153846153846155	unmethylated (<10%)	Q569D5	Methanethiol oxidase (MTO) (EC 1.8.3.4) (Selenium-binding protein 1)	NA	hit, no GO BP
GN006266	Chromosome_2A	5633	7	173	40.529025386117524	0.7651549532431435	1.0099281068127353	171	0	0.9731913330885054	160	0	1.5151515151515151	11	0	0.35714285714285715	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006267	Chromosome_2A	9183	7	150	35.761733638244586	0.5139671683392194	83.87886884880872	150	0.9066666666666666	84.89096573208722	39	0.9230769230769231	83.60260770975057	111	0.9009009009009009	0.5904681568958245	35	0	methylated (>=50%)	Q8BH27	Multiple epidermal growth factor-like domains protein 9 (Multiple EGF-like domains protein 9) (Epidermal growth factor-like protein 5) (EGF-like protein 5)	animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; basement membrane assembly [GO:0070831]; cell migration [GO:0016477]; substrate adhesion-dependent cell spreading [GO:0034446]; tissue development [GO:0009888]	hit with GO BP
GN006268	Chromosome_2A	219	1	4	50.68493150684932	0.28834759710335744	0	4	0	0	4	0	NA	NA	NA	0.8442776735459663	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006269	Chromosome_2A	462	1	16	43.506493506493506	0.7636363636363637	0.8547008547008547	16	0	0.8547008547008547	16	0	NA	NA	NA	0.2540220152413209	29	0	unmethylated (<10%)	F7J186	Cholesterol 7-desaturase nvd 1 (EC 1.14.19.21) (Neverland 1) (Nvd-Ci-1)	cholesterol metabolic process [GO:0008203]	hit with GO BP
GN006270	Chromosome_2A	282	1	6	41.13475177304964	0.5444015444015444	1.3043478260869565	6	0	1.3043478260869565	6	0	NA	NA	NA	1.0973936899862826	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006271	Chromosome_2A	747	1	25	53.5475234270415	0.47112692045712556	78.74251497005989	23	0.8260869565217391	78.74251497005989	23	0.8260869565217391	NA	NA	NA	63.70320855614973	18	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006272	Chromosome_2A	11155	6	305	34.845360824742265	0.9007633365474377	0.845273065163959	305	0	0.600739371534196	50	0	0.8817248742853206	255	0	0.5706676811869887	81	0	unmethylated (<10%)	F7J184	Cholesterol 7-desaturase nvd (EC 1.14.19.21) (Protein neverland) (Nvd protein) (nvd-Xl)	cholesterol metabolic process [GO:0008203]	hit with GO BP
GN006273	Chromosome_2A	1539	1	22	41.78037686809617	0.3821444695259594	78.07424593967518	22	1	78.07424593967518	22	1	NA	NA	NA	95.80686149936467	11	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006274	Chromosome_2A	9405	10	89	35.45986177565125	0.3015146242940723	89.59132610508757	89	0.9775280898876404	91.58878504672897	23	1	88.98783666377064	66	0.9696969696969697	91.78272980501393	41	1	methylated (>=50%)	Q91YR5	eEF1A lysine and N-terminal methyltransferase (eEF1A-KNMT) (Methyltransferase-like protein 13) [Includes: eEF1A lysine methyltransferase (EC 2.1.1.-); eEF1A N-terminal methyltransferase (EC 2.1.1.-)]	NA	hit, no GO BP
GN006275	Chromosome_2A	8055	10	123	36.71011793916822	0.45578566460203374	93.39142242842594	123	1	95.8029197080292	39	1	92.59593679458239	84	1	87.89614356624666	68	1	methylated (>=50%)	Q7ZYH1	Target of rapamycin complex 2 subunit MAPKAP1 (TORC2 subunit MAPKAP1) (Mitogen-activated protein kinase 2-associated protein 1) (Stress-activated map kinase-interacting protein 1) (SAPK-interacting protein 1)	TORC2 signaling [GO:0038203]	hit with GO BP
GN006276	Chromosome_2A	19149	12	256	36.210768186328266	0.4134432408949645	86.34240801913657	256	0.98828125	93.22519083969466	46	1	85.4093907644548	210	0.9857142857142858	50.534188034188034	16	0.375	methylated (>=50%)	Q03167	Transforming growth factor beta receptor type 3 (TGF-beta receptor type 3) (TGFR-3) (Betaglycan) (Transforming growth factor beta receptor III) (TGF-beta receptor type III)	animal organ regeneration [GO:0031100]; BMP signaling pathway [GO:0030509]; cardiac epithelial to mesenchymal transition [GO:0060317]; cardiac muscle cell proliferation [GO:0060038]; cell migration [GO:0016477]; definitive erythrocyte differentiation [GO:0060318]; definitive hemopoiesis [GO:0060216]; epicardium-derived cardiac fibroblast cell development [GO:0060939]; epithelial to mesenchymal transition [GO:0001837]; heart morphogenesis [GO:0003007]; heart trabecula formation [GO:0060347]; heart trabecula morphogenesis [GO:0061384]; immune response [GO:0006955]; intracellular signal transduction [GO:0035556]; liver development [GO:0001889]; muscular septum morphogenesis [GO:0003150]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cell migration [GO:0030336]; negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of extracellular matrix assembly [GO:1901202]; negative regulation of SMAD protein signal transduction [GO:0060392]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; outflow tract morphogenesis [GO:0003151]; positive regulation of cardiac muscle cell proliferation [GO:0060045]; positive regulation of cell migration involved in sprouting angiogenesis [GO:0090050]; positive regulation of gene expression [GO:0010628]; positive regulation of SMAD protein signal transduction [GO:0060391]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; regulation of transforming growth factor beta receptor signaling pathway [GO:0017015]; response to follicle-stimulating hormone [GO:0032354]; response to hypoxia [GO:0001666]; response to luteinizing hormone [GO:0034699]; response to prostaglandin E [GO:0034695]; secondary palate development [GO:0062009]; transforming growth factor beta receptor complex assembly [GO:0007181]; transforming growth factor beta receptor signaling pathway [GO:0007179]; vasculogenesis involved in coronary vascular morphogenesis [GO:0060979]; ventricular cardiac muscle tissue morphogenesis [GO:0055010]; ventricular compact myocardium morphogenesis [GO:0003223]; ventricular septum morphogenesis [GO:0060412]	hit with GO BP
GN006277	Chromosome_2A	21418	15	511	34.442991875992156	0.8061950761733165	0.7938978829389788	495	0	0.9704251386321626	46	0	0.77766445690974	449	0	0.5553182400683468	41	0	unmethylated (<10%)	Q708S3	Acid-sensing ion channel 4-B (ASIC4-B) (Acid-sensing ion channel 4.2) (Amiloride-sensitive cation channel 4-B) (ZASIC4.2)	response to steroid hormone [GO:0048545]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN006278	Chromosome_2A	4360	7	46	35.57339449541284	0.33360501671684495	86.9669054930058	46	0.9782608695652174	89.44444444444444	14	1	85.86903003446578	32	0.96875	94.04069767441861	33	1	methylated (>=50%)	P56962	Syntaxin-17	autophagosome maturation [GO:0097352]; autophagosome membrane docking [GO:0016240]; autophagosome-lysosome fusion [GO:0061909]; cellular response to starvation [GO:0009267]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; endoplasmic reticulum-Golgi intermediate compartment organization [GO:0097111]; exocytosis [GO:0006887]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]; macroautophagy [GO:0016236]; protein localization to phagophore assembly site [GO:0034497]; vesicle docking [GO:0048278]; vesicle fusion [GO:0006906]	hit with GO BP
GN006279	Chromosome_2A	17304	18	268	35.84142394822006	0.48572341594818447	89.06131053463723	267	0.9812734082397003	92.83476898981989	52	1	88.39771397094265	215	0.9767441860465116	92.58406264394289	33	1	methylated (>=50%)	Q9VAC5	ADAM 17-like protease (EC 3.4.24.-)	commissural neuron axon guidance [GO:0071679]; membrane protein ectodomain proteolysis [GO:0006509]; negative regulation of multicellular organism growth [GO:0040015]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; Notch receptor processing [GO:0007220]; Notch signaling pathway [GO:0007219]; positive regulation of programmed cell death [GO:0043068]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN006280	Chromosome_2A	11277	14	124	36.89811119978718	0.32308035675090696	92.18318925878242	122	1	91.18070554355651	67	1	93.23053779616397	55	1	62.03931203931204	45	0.8	methylated (>=50%)	F1REV3	Krev interaction trapped protein 1 (Krev interaction trapped 1) (Cerebral cavernous malformations 1 protein homolog) (Santa)	angiogenesis [GO:0001525]; anterior/posterior axis specification [GO:0009948]; atrioventricular valve morphogenesis [GO:0003181]; blood vessel development [GO:0001568]; blood vessel lumenization [GO:0072554]; blood vessel morphogenesis [GO:0048514]; cell redox homeostasis [GO:0045454]; endocardial cell development [GO:0060958]; endothelial cell morphogenesis [GO:0001886]; heart contraction [GO:0060047]; heart development [GO:0007507]; heart morphogenesis [GO:0003007]; negative regulation of angiogenesis [GO:0016525]; negative regulation of endothelial cell differentiation [GO:0045602]; regulation of establishment of cell polarity [GO:2000114]; vacuole organization [GO:0007033]; vasculogenesis [GO:0001570]	hit with GO BP
GN006281	Chromosome_2A	30242	22	399	35.073738509357845	0.4297170537003957	80.67670282635967	393	0.9491094147582697	88.44550327575938	64	1	79.5779986522911	329	0.939209726443769	27.503974562798092	37	0.32432432432432434	methylated (>=50%)	O75762	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation-sensitive protein p120) (p120) (Wasabi receptor)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; cell surface receptor signaling pathway [GO:0007166]; cellular response to caffeine [GO:0071313]; cellular response to carbon dioxide [GO:0071244]; cellular response to cold [GO:0070417]; cellular response to food [GO:0071240]; cellular response to heat [GO:0034605]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transport [GO:0006811]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of monoatomic anion transport [GO:1903793]; protein homotetramerization [GO:0051289]; regulation of blood circulation [GO:1903522]; regulation of neuronal action potential [GO:0098908]; response to cold [GO:0009409]; sensory perception of pain [GO:0019233]; thermoception [GO:0050955]; ureteric peristalsis [GO:0072105]; urinary bladder smooth muscle contraction [GO:0014832]; vasodilation [GO:0042311]	hit with GO BP
GN006282	Chromosome_2A	537	1	36	44.506517690875235	1.3869995695221695	0.4694835680751174	36	0	0.4694835680751174	36	0	NA	NA	NA	0.468384074941452	28	0	unmethylated (<10%)	Q9XF62	Microtubule nucleation factor SSNA1 (CrSSNA1) (13 kDa deflagellation-inducible protein)	cell division [GO:0051301]; microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN006283	Chromosome_2A	15841	8	177	35.477558234959915	0.3568299514208003	86.0243465131641	176	0.9829545454545454	89.49107732980833	32	0.96875	85.44693967415236	144	0.9861111111111112	0.7145287512759442	71	0	methylated (>=50%)	Q8T5C6	Retinoic acid receptor RXR (RXR-like protein) (Retinoid X receptor) (BgRXR)	NA	hit, no GO BP
GN006284	Chromosome_2A	351	1	31	62.96296296296296	0.8942307692307693	0	7	0	0	7	0	NA	NA	NA	0.5311443746982134	97	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006285	Chromosome_2A	546	1	25	45.42124542124542	0.8891928864569083	0.45454545454545453	23	0	0.45454545454545453	23	0	NA	NA	NA	0.6391137622496804	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006286	Chromosome_2A	261	1	0	45.21072796934866	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.34797738147020446	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006287	Chromosome_2A	5966	6	46	36.89239021119678	0.22665787904465995	71.29934210526316	41	0.8048780487804879	73.35907335907336	6	0.8333333333333334	71.05384261389784	35	0.8	85.15123739688359	13	1	methylated (>=50%)	P0DX22	L-fucono-1,5-lactonase (EC 3.1.1.120) (Fuconolactonase)	NA	hit, no GO BP
GN006288	Chromosome_2A	321	1	4	54.205607476635514	0.6134734830387004	16.666666666666668	1	0	16.666666666666668	1	0	NA	NA	NA	87.10424710424711	21	1	NA	NA	NA	NA	no Swiss-Prot hit
GN006289	Chromosome_2A	12441	19	123	33.63073707901294	0.35184155205083006	71.5909090909091	121	0.8181818181818182	73.98615232443126	35	0.8857142857142857	70.7697524584605	86	0.7906976744186046	3.6818181818181817	46	0	methylated (>=50%)	Q8NE28	Serine/threonine kinase-like domain-containing protein STKLD1 (Serine/threonine kinase-like domain-containing protein 1) (Sugen kinase 071)	NA	hit, no GO BP
GN006290	Chromosome_2A	8697	3	112	37.02426123950788	0.3793432729799156	86.39405204460967	103	0.941747572815534	88.85245901639344	6	1	86.24630541871922	97	0.9381443298969072	35.688140556368964	39	0.358974358974359	methylated (>=50%)	Q6GQ95	Mediator of RNA polymerase II transcription subunit 22 (Mediator complex subunit 22) (Surfeit locus protein 5)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006291	Chromosome_2A	10825	7	220	35.47344110854503	0.6460626530210856	84.39571647118817	218	0.908256880733945	82.28155339805825	19	0.8947368421052632	84.53072928776254	199	0.9095477386934674	39.48082138705928	37	0.40540540540540543	methylated (>=50%)	O57592	Large ribosomal subunit protein eL8 (60S ribosomal protein L7a) (Surfeit locus protein 3)	ribosome biogenesis [GO:0042254]	hit with GO BP
GN006292	Chromosome_2A	352	2	10	38.35227272727273	0.7729468599033816	0.48582995951417	10	0	0.32679738562091504	8	0	0.9463722397476341	2	0	0.7140731925022314	52	0	unmethylated (<10%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN006293	Chromosome_2A	8644	5	108	34.173993521517815	0.428314827584783	23.12121212121212	88	0.26136363636363635	5.412371134020619	8	0.125	25.48076923076923	80	0.275	0.21777003484320556	35	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006294	Chromosome_2A	1075	2	49	43.44186046511628	0.9709677419354839	0.7609384908053266	49	0	0.7827788649706457	48	0	0	1	0	1.9165727170236753	50	0	unmethylated (<10%)	Q5M886	Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase (EC 3.6.1.16) (EC 3.6.1.53) (ADPRibase-Mn) (CDP-choline phosphohydrolase)	NA	hit, no GO BP
GN006295	Chromosome_2A	29978	22	694	34.21175528721062	0.7919831769262198	0.8226510776165658	647	0	0.5534755005697541	108	0	0.8789860997547015	539	0	0.6802721088435374	51	0	unmethylated (<10%)	P18910	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN006296	Chromosome_2A	2059	2	72	37.49392909179213	0.9957884130982367	0.6140917905623788	71	0	0.6822262118491921	68	0	0	3	0	0.5152979066022544	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006297	Chromosome_2A	835	2	29	45.50898203592814	0.6782913165266107	0.15313935681470137	29	0	0.15313935681470137	29	0	NA	NA	NA	2.2396416573348263	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006298	Chromosome_2A	1134	1	37	41.26984126984127	0.7686445490684595	0.9847806624888094	37	0	0.9847806624888094	37	0	NA	NA	NA	0.3785488958990536	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006299	Chromosome_2A	4073	7	111	35.723054259759394	0.8571485448857712	0.6623536660505237	111	0	0.430416068866571	34	0	0.7257748136524127	77	0	0.40526849037487334	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006300	Chromosome_2A	2368	2	78	37.119932432432435	0.9661261638246679	0.7241606319947334	78	0	0.43010752688172044	18	0	0.7575757575757576	60	0	0.6373486297004461	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006301	Chromosome_2A	6858	6	63	34.7477398658501	0.3043919966182894	11.398728428701181	27	0	5.405405405405405	5	0	12.466559657570894	22	0	0.6539509536784741	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006302	Chromosome_2A	3209	4	112	35.899033966967906	1.0845927285017622	0.6420190391853	111	0	0.3194888178913738	15	0	0.6939090208172706	96	0	0.27713625866050806	40	0	unmethylated (<10%)	Q20930	Metalloprotease mig-17 (EC 3.4.24.-) (Abnormal cell migration protein 17)	gonad morphogenesis [GO:0035262]; intracellular protein localization [GO:0008104]; protein autoprocessing [GO:0016540]; regulation of cell migration [GO:0030334]; regulation of distal tip cell migration [GO:1903354]; zymogen activation [GO:0031638]	hit with GO BP
GN006303	Chromosome_2A	14398	8	194	35.706348103903316	0.49233926774807396	1.5250079982936973	179	0	4.380746349378042	53	0	0.8235919234856536	126	0	2.126014688828759	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006304	Chromosome_2A	8931	14	214	33.69163587504199	0.8443972201481822	0.6511976047904192	214	0	0.5221214619400935	70	0	0.6995165106470528	144	0	0.36536353671903543	50	0	unmethylated (<10%)	Q20930	Metalloprotease mig-17 (EC 3.4.24.-) (Abnormal cell migration protein 17)	gonad morphogenesis [GO:0035262]; intracellular protein localization [GO:0008104]; protein autoprocessing [GO:0016540]; regulation of cell migration [GO:0030334]; regulation of distal tip cell migration [GO:1903354]; zymogen activation [GO:0031638]	hit with GO BP
GN006305	Chromosome_2A	744	1	15	37.634408602150536	0.585181689476168	0.6451612903225806	4	0	0.6451612903225806	4	0	NA	NA	NA	2.3993493289955268	70	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006306	Chromosome_2A	4680	6	86	37.82051282051282	0.5323809523809524	0.5942947702060222	67	0	0.6118286879673691	47	0	0.5698005698005698	20	0	1.6224188790560472	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006307	Chromosome_2A	6090	8	182	39.81937602627258	0.7895287958115184	0.8816895632561	134	0	0.4861111111111111	45	0	1.047425080011638	89	0	0.7089684509039348	50	0	unmethylated (<10%)	Q9WUQ1	A disintegrin and metalloproteinase with thrombospondin motifs 1 (ADAM-TS 1) (ADAM-TS1) (ADAMTS-1) (EC 3.4.24.-)	cellular response to parathyroid hormone stimulus [GO:0071374]; cellular response to prostaglandin E stimulus [GO:0071380]; cellular response to vitamin D [GO:0071305]; extracellular matrix organization [GO:0030198]; heart trabecula formation [GO:0060347]; kidney development [GO:0001822]; negative regulation of angiogenesis [GO:0016525]; ovulation from ovarian follicle [GO:0001542]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; positive regulation of neuron projection development [GO:0010976]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; proteolysis [GO:0006508]	hit with GO BP
GN006308	Chromosome_2A	3614	2	85	35.25179856115108	0.7572821756794068	0.7007419620774938	85	0	0.3347680535628886	44	0	0.9779065555957986	41	0	5.753968253968254	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006309	Chromosome_2A	11702	5	130	35.421295505041876	0.3634713730992095	78.62299321193836	118	0.940677966101695	89.6694214876033	6	1	78.32724858944573	112	0.9375	91.20477928974444	73	1	methylated (>=50%)	Q91VB4	BLOC-2 complex member HPS3 (Cocoa protein) (Hermansky-Pudlak syndrome 3 protein homolog)	eye pigmentation [GO:0048069]; melanosome assembly [GO:1903232]; pigmentation [GO:0043473]; platelet dense granule organization [GO:0060155]	hit with GO BP
GN006310	Chromosome_2A	399	1	7	42.857142857142854	0.3836538461538462	0.24449877750611246	7	0	0.24449877750611246	7	0	NA	NA	NA	1.1523046092184368	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006311	Chromosome_2A	801	1	50	47.19101123595506	1.1219744509188705	1.1494252873563218	50	0	1.1494252873563218	50	0	NA	NA	NA	0.6474587245063127	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006312	Chromosome_2A	33865	20	460	35.91613760519711	0.4242952739282363	87.2949079257229	420	0.95	93.6959490213928	97	0.9896907216494846	85.98726114649682	323	0.9380804953560371	60.74619022595901	27	0.6666666666666666	methylated (>=50%)	Q32LP4	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)	bicarbonate transport [GO:0015701]; regulation of intracellular pH [GO:0051453]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; visual perception [GO:0007601]	hit with GO BP
GN006313	Chromosome_2A	534	1	31	49.438202247191015	0.9509420955882353	0.5952380952380952	31	0	0.5952380952380952	31	0	NA	NA	NA	0.8659981768459435	54	0	unmethylated (<10%)	Q07263	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006314	Chromosome_2A	483	1	25	44.099378881987576	1.0646270499030153	0.9803921568627451	25	0	0.9803921568627451	25	0	NA	NA	NA	0.9305210918114144	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006315	Chromosome_2A	19141	14	285	34.51752781986312	0.5047749816279241	79.38144329896907	244	0.8278688524590164	86.51546391752578	36	0.9722222222222222	78.0404619796915	208	0.8028846153846154	90.43478260869566	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006316	Chromosome_2A	381	1	8	40.68241469816273	0.538135593220339	0	4	0	0	4	0	NA	NA	NA	5.2631578947368425	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006317	Chromosome_2A	12503	13	327	35.71142925697833	0.8233901072697921	0.874841258642585	285	0	0.7516442217350454	56	0	0.9106638739641199	229	0	0.49586776859504134	26	0	unmethylated (<10%)	P13944	Collagen alpha-1(XII) chain (Fibrochimerin)	endodermal cell differentiation [GO:0035987]	hit with GO BP
GN006318	Chromosome_2A	22642	18	588	35.82280717251126	0.8096374956260041	2.200902934537246	554	0.0018050541516245488	0.4409171075837742	85	0	2.6408605943038532	469	0.0021321961620469083	0.45871559633027525	50	0	unmethylated (<10%)	Q5UR46	Uncharacterized protein R571 (EC 3.1.1.-)	lipid catabolic process [GO:0016042]	hit with GO BP
GN006319	Chromosome_2A	765	2	18	41.30718954248366	0.5669466403162056	0.49382716049382713	18	0	0.5882352941176471	16	0	0	2	0	0.9422110552763819	104	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006320	Chromosome_2A	1593	1	22	42.93785310734463	0.39197834645669294	0	22	0	0	22	0	NA	NA	NA	1.3213981244671782	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006321	Chromosome_2A	24448	14	550	35.00899869109948	0.7344260805153042	0.5897385492431688	390	0	0.45367717287488063	55	0	0.6113769271664008	335	0	1.3360739979445015	61	0	unmethylated (<10%)	Q5UR46	Uncharacterized protein R571 (EC 3.1.1.-)	lipid catabolic process [GO:0016042]	hit with GO BP
GN006322	Chromosome_2A	12929	16	153	35.9965967978962	0.3664030895754612	80.20098995050247	133	0.8947368421052632	86.71565856416055	84	0.9523809523809523	72.83477149248961	49	0.7959183673469388	60	20	0.65	methylated (>=50%)	Q86VW0	SEC14 domain and spectrin repeat-containing protein 1 (Huntingtin-interacting protein-like protein) (Protein Solo)	negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel [GO:1904878]	hit with GO BP
GN006323	Chromosome_2A	2065	2	41	36.997578692493946	0.5812189362111102	35.76547231270359	41	0.3902439024390244	39.850746268656714	39	0.41025641025641024	7.6923076923076925	2	0	14.590747330960854	23	0.043478260869565216	sparse (10-50%)	Q6PDN3	Myosin light chain kinase, smooth muscle (MLCK) (smMLCK) (EC 2.7.11.18) (Kinase-related protein) (KRP) (Telokin) [Cleaved into: Myosin light chain kinase, smooth muscle, deglutamylated form]	aorta smooth muscle tissue morphogenesis [GO:0060414]; bleb assembly [GO:0032060]; cellular hypotonic response [GO:0071476]; cellular response to calcium ion [GO:0071277]; cellular response to potassium ion [GO:0035865]; cellular response to xenobiotic stimulus [GO:0071466]; neurotransmitter receptor transport to postsynaptic membrane [GO:0098969]; positive regulation of calcium ion transport [GO:0051928]; positive regulation of cell migration [GO:0030335]; positive regulation of vascular associated smooth muscle contraction [GO:1904695]; positive regulation of wound healing [GO:0090303]; regulation of synaptic vesicle endocytosis [GO:1900242]; smooth muscle contraction [GO:0006939]; tonic smooth muscle contraction [GO:0014820]	hit with GO BP
GN006324	Chromosome_2A	2321	5	67	38.51788022404136	0.7783756456973532	6.025009473285335	67	0.07462686567164178	16.009557945041816	27	0.18518518518518517	1.3873473917869035	40	0	0.3776435045317221	54	0	unmethylated (<10%)	A2AJ77	PR domain zinc finger protein 12 (PR domain-containing protein 12)	detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neurogenesis [GO:0022008]; neuron fate specification [GO:0048665]; neuron projection development [GO:0031175]; protein methylation [GO:0006479]; regulation of gene expression [GO:0010468]; sensory perception of pain [GO:0019233]	hit with GO BP
GN006325	Chromosome_2A	10196	8	204	34.229109454688114	0.6835107353087603	27.498425834307817	203	0.26108374384236455	22.70187912646013	44	0.13636363636363635	28.530826410144293	159	0.29559748427672955	0.5491762356465302	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006326	Chromosome_2A	1034	2	37	42.06963249516441	0.8134115746056044	0.9136212624584718	37	0	0.8880994671403197	35	0	1.2820512820512822	2	0	1.328502415458937	50	0	unmethylated (<10%)	Q27218	Acetylcholine receptor subunit beta-type lev-1 (Levamisole-resistant protein 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of egg-laying behavior [GO:0046662]; regulation of locomotion [GO:0040012]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]; transmembrane transport [GO:0055085]	hit with GO BP
GN006327	Chromosome_2A	1170	1	46	41.1965811965812	0.9293410692084542	0.26737967914438504	19	0	0.26737967914438504	19	0	NA	NA	NA	0.6842619745845552	62	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006328	Chromosome_2A	315	1	17	43.17460317460318	1.1583387410772226	0.4533678756476684	17	0	0.4533678756476684	17	0	NA	NA	NA	1.1408339889850512	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006329	Chromosome_2A	1197	1	36	40.51796157059315	0.7375483517612023	0	18	0	0	18	0	NA	NA	NA	2.737291148240313	40	0	unmethylated (<10%)	P18845	Neuronal acetylcholine receptor subunit alpha-3 (GF-alpha-3)	behavioral response to nicotine [GO:0035095]; nervous system development [GO:0007399]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]	hit with GO BP
GN006330	Chromosome_2A	1170	1	46	41.282051282051285	0.9252828112643124	0	21	0	0	21	0	NA	NA	NA	0.8489993935718617	59	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006331	Chromosome_2A	1197	1	38	40.26733500417711	0.7909920876445526	0.5319148936170213	21	0	0.5319148936170213	21	0	NA	NA	NA	0.753370340999207	61	0	unmethylated (<10%)	P18845	Neuronal acetylcholine receptor subunit alpha-3 (GF-alpha-3)	behavioral response to nicotine [GO:0035095]; nervous system development [GO:0007399]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]	hit with GO BP
GN006332	Chromosome_2A	2288	3	75	39.33566433566433	0.8494376683035008	0.7500852369587453	75	0	0.8121827411167513	30	0	0.7186858316221766	45	0	0.7337526205450734	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006333	Chromosome_2A	825	2	26	42.42424242424242	0.7004310344827587	0.7104795737122558	26	0	0.7104795737122558	26	0	NA	NA	NA	0.7496740547588006	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006334	Chromosome_2A	372	1	22	53.494623655913976	0.8596638655462185	0.6920415224913494	18	0	0.6920415224913494	18	0	NA	NA	NA	0.9100837277029487	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006335	Chromosome_2A	863	3	46	49.94206257242178	0.9155442804428044	0.29673590504451036	46	0	0.3448275862068966	41	0	0	5	0	0.586756077116513	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006336	Chromosome_2A	1053	1	49	45.58404558404558	0.8980263157894737	0.6901840490797546	49	0	0.6901840490797546	49	0	NA	NA	NA	0.4066877541798464	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006337	Chromosome_2A	7737	18	136	37.75365128602817	0.4966779008184882	93.2216108054027	136	1	95.85112873703477	57	1	91.3946587537092	79	1	90.32059186189889	22	1	methylated (>=50%)	Q80W00	Serine/threonine-protein phosphatase 1 regulatory subunit 10 (MHC class I region proline-rich protein CAT53) (Phosphatase 1 nuclear targeting subunit)	negative regulation of cardiac muscle cell apoptotic process [GO:0010667]; negative regulation of mitotic DNA damage checkpoint [GO:1904290]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of telomere maintenance [GO:0032206]; positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled [GO:2000806]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; protein stabilization [GO:0050821]; RNA polymerase II promoter clearance [GO:0001111]; transcription by RNA polymerase II [GO:0006366]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN006338	Chromosome_2A	186	1	2	40.86021505376344	0.28615384615384615	96.7741935483871	2	1	96.7741935483871	2	1	NA	NA	NA	94.71615720524018	33	1	NA	NA	NA	NA	no Swiss-Prot hit
GN006339	Chromosome_2A	6192	4	59	32.848837209302324	0.3535241811166947	88.17591925018024	58	0.9655172413793104	91.47609147609148	7	1	87.7445652173913	51	0.9607843137254902	86.33474576271186	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006340	Chromosome_2A	35778	15	503	35.22555760523227	0.45328422962858184	83.30117262876651	501	0.9680638722554891	90.08319467554077	65	1	82.63689700130378	436	0.963302752293578	80.34843205574913	18	0.9444444444444444	methylated (>=50%)	Q92574	Hamartin (Tuberous sclerosis 1 protein)	activation of GTPase activity [GO:0090630]; adult locomotory behavior [GO:0008344]; cell-matrix adhesion [GO:0007160]; cellular response to decreased oxygen levels [GO:0036294]; cellular response to starvation [GO:0009267]; negative regulation of ATP-dependent activity [GO:0032780]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of macroautophagy [GO:0016242]; negative regulation of TOR signaling [GO:0032007]; negative regulation of TORC1 signaling [GO:1904262]; positive regulation of focal adhesion assembly [GO:0051894]; protein stabilization [GO:0050821]; regulation of cell cycle [GO:0051726]; regulation of cell-matrix adhesion [GO:0001952]; regulation of stress fiber assembly [GO:0051492]; response to insulin [GO:0032868]	hit with GO BP
GN006341	Chromosome_2A	14161	12	427	36.89005013770214	0.8877789841427847	1.7986141825151114	411	0	0.5494505494505495	105	0	2.10461914958703	306	0	2.161500815660685	76	0	unmethylated (<10%)	Q9H0K4	Radial spoke head protein 6 homolog A (Radial spoke head-like protein 1)	axoneme assembly [GO:0035082]; cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]; manchette disassembly [GO:1905199]; sperm flagellum assembly [GO:0120316]	hit with GO BP
GN006342	Chromosome_2A	1347	2	43	36.97104677060133	0.9342096774193548	0.3475238922675934	43	0	0.5532503457814661	17	0	0.253324889170361	26	0	0.722334585379948	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006343	Chromosome_2A	384	1	14	43.489583333333336	0.7887323943661971	0.7675438596491229	14	0	0.7675438596491229	14	0	NA	NA	NA	0.6181645268663813	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006344	Chromosome_2A	53478	24	1304	35.43513220389693	0.7767924526788643	1.4164036353831269	1241	0.0064464141821112	0.4933783432874578	227	0	1.623490115353245	1014	0.007889546351084813	0.981404958677686	50	0	unmethylated (<10%)	Q9Z2F6	B-cell lymphoma 3 protein homolog (BCL-3)	antimicrobial humoral response [GO:0019730]; canonical NF-kappaB signal transduction [GO:0007249]; defense response to bacterium [GO:0042742]; defense response to protozoan [GO:0042832]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extracellular matrix organization [GO:0030198]; follicular dendritic cell differentiation [GO:0002268]; germinal center formation [GO:0002467]; humoral immune response mediated by circulating immunoglobulin [GO:0002455]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; marginal zone B cell differentiation [GO:0002315]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; positive regulation of type II interferon production [GO:0032729]; protein import into nucleus [GO:0006606]; regulation of apoptotic process [GO:0042981]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]; response to UV-C [GO:0010225]; response to virus [GO:0009615]; spleen development [GO:0048536]; T-helper 1 type immune response [GO:0042088]; T-helper 2 cell differentiation [GO:0045064]	hit with GO BP
GN006345	Chromosome_2A	3028	4	12	33.42140026420079	0.14248741235706555	11.627906976744185	2	0	NA	NA	NA	11.627906976744185	2	0	4.132231404958677	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006346	Chromosome_2A	396	1	11	39.39393939393939	0.8402777777777778	0.9523809523809523	10	0	0.9523809523809523	10	0	NA	NA	NA	0.6846081208687441	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006347	Chromosome_2A	384	1	2	35.677083333333336	0.3585434173669468	0	2	0	0	2	0	NA	NA	NA	5.304919519383359	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006348	Chromosome_2A	39245	18	1101	36.05300038221429	0.8634175446665203	0.8303477344573235	991	0	0.638648537288834	157	0	0.8521926941496855	834	0	0.6554307116104869	13	0	unmethylated (<10%)	P15989	Collagen alpha-3(VI) chain	NA	hit, no GO BP
GN006349	Chromosome_2A	381	1	12	44.356955380577425	0.6405155505743906	0.5361930294906166	12	0	0.5361930294906166	12	0	NA	NA	NA	0.47602856171370284	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006350	Chromosome_2A	510	1	27	42.35294117647059	1.1953125	0.5388760585065435	27	0	0.5388760585065435	27	0	NA	NA	NA	0.7240853658536586	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006351	Chromosome_2A	474	1	18	50.63291139240506	0.5926646290636288	0.31347962382445144	18	0	0.31347962382445144	18	0	NA	NA	NA	0.6024096385542169	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006352	Chromosome_2A	2439	2	73	37.269372693726936	0.8622965904688106	0.6651243493348756	73	0	0.6303466906798739	47	0	0.7275666936135813	26	0	0.7092198581560284	53	0	unmethylated (<10%)	Q09324	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102) (Core 2 beta-1,6-N-acetylglucosaminyltransferase) (C2GlcNAcT) (Core 2-branching enzyme) (Core2-GlcNAc-transferase) (C2GNT) (Leukocyte type core 2 beta-1,6-N-acetylglucosaminyltransferase) (C2GnT-L)	cell adhesion molecule production [GO:0060352]; glycoprotein biosynthetic process [GO:0009101]; kidney morphogenesis [GO:0060993]; leukocyte tethering or rolling [GO:0050901]; positive regulation of leukocyte tethering or rolling [GO:1903238]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]; tissue morphogenesis [GO:0048729]	hit with GO BP
GN011143	Chromosome_2A	1825	6	55	36.986301369863014	0.8812554872695347	0.5661348430262481	53	0	0.6481481481481481	28	0	0.46349942062572425	25	0	0.4069175991861648	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006353	Chromosome_2A	14084	6	230	35.586481113320076	0.517818949118404	63.49508954361641	224	0.7946428571428571	53.89457120377656	25	0.64	64.25587630151506	199	0.8140703517587939	67.06067769897557	22	0.7272727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006354	Chromosome_2A	1936	9	7	27.272727272727273	0.19620390612558092	6.25	2	0	0	1	0	15.384615384615385	1	0	45.165238678090574	15	0.4	NA	NA	NA	NA	no Swiss-Prot hit
GN002593	Chromosome_2A	648	2	8	39.96913580246913	0.31015914801962424	73.53407290015848	8	0.625	73.53407290015848	8	0.625	NA	NA	NA	88.30806065442937	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006355	Chromosome_2A	7508	8	124	37.98614810868407	0.4585914471713876	85.00147188695908	124	0.8790322580645161	73.31010452961672	40	0.8	88.13211420041053	84	0.9166666666666666	5.583585603767238	43	0.023255813953488372	methylated (>=50%)	Q90WR8	Transcription factor Sp3	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006356	Chromosome_2A	8748	12	91	35.84819387288523	0.32613240418118467	71.8005445881552	91	0.8241758241758241	80.28523489932886	52	0.9230769230769231	66.00801832760595	39	0.6923076923076923	78.78897751994198	31	0.967741935483871	methylated (>=50%)	P35224	Catenin beta (Beta-catenin)	cell adhesion [GO:0007155]	hit with GO BP
GN006357	Chromosome_2A	10095	7	126	34.39326399207528	0.42680592321271643	84.40199537656649	126	0.9682539682539683	76.64921465968587	20	0.9	85.42125550660793	106	0.9811320754716981	45.6021650879567	10	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006358	Chromosome_2A	777	1	25	39.897039897039896	0.8602364819981401	9.24901185770751	25	0.04	9.24901185770751	25	0.04	NA	NA	NA	50.25876940770558	22	0.6363636363636364	unmethylated (<10%)	Q3T0B6	Complement component 1 Q subcomponent-binding protein, mitochondrial	cytosolic ribosome assembly [GO:0042256]; mitochondrial RNA catabolic process [GO:0000957]; negative regulation of defense response to virus [GO:0050687]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; negative regulation of interleukin-12 production [GO:0032695]; negative regulation of MDA-5 signaling pathway [GO:0039534]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; negative regulation of RIG-I signaling pathway [GO:0039536]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of type II interferon production [GO:0032689]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell adhesion [GO:0045785]; positive regulation of dendritic cell chemotaxis [GO:2000510]; positive regulation of mitochondrial translation [GO:0070131]; positive regulation of neutrophil chemotaxis [GO:0090023]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; positive regulation of trophoblast cell migration [GO:1901165]; regulation of complement activation [GO:0030449]	hit with GO BP
GN006359	Chromosome_2A	8675	7	101	33.51008645533141	0.41522677469252817	75.96542590269064	101	0.801980198019802	76.1963190184049	13	0.8461538461538461	75.93582887700535	88	0.7954545454545454	1.669316375198728	47	0	methylated (>=50%)	Q9CQR6	Serine/threonine-protein phosphatase 6 catalytic subunit (PP6C) (EC 3.1.3.16)	cGAS/STING signaling pathway [GO:0140896]; G1/S transition of mitotic cell cycle [GO:0000082]; negative regulation of cGAS/STING signaling pathway [GO:0160049]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN006360	Chromosome_2A	2866	3	64	34.263782274947665	0.7638847243045144	1.4683389415723462	64	0	0.5865102639296188	24	0	1.8699910952804986	40	0	14.713094654242276	34	0.14705882352941177	unmethylated (<10%)	Q6CSW8	NEDD8-conjugating enzyme UBC12 (EC 2.3.2.34) (RUB1-conjugating enzyme) (Ubiquitin carrier protein 12)	protein neddylation [GO:0045116]	hit with GO BP
GN006361	Chromosome_2A	3911	2	125	39.81079007926362	0.8075773093696313	1.303453007088955	125	0	0.4819277108433735	17	0	1.4959074230877787	108	0	0.44411547002220575	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006362	Chromosome_2A	2889	8	76	34.96019383869851	0.8609643911677862	0.680973999174577	76	0	0.7534246575342466	49	0	0.5711318795430945	27	0	0.34965034965034963	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006363	Chromosome_2A	1798	6	43	36.4293659621802	0.7211185106422668	0.4869411243913236	43	0	0.6279434850863422	26	0	0.30456852791878175	17	0	0.606323083585968	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006364	Chromosome_2A	2469	4	58	33.25232887808829	0.8511870088802768	0.5401234567901234	48	0	0.33783783783783783	26	0	0.8093525179856115	22	0	0.669188245562991	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006365	Chromosome_2A	1953	5	45	34.66461853558628	0.7682255244755245	0.6584043377226956	45	0	0.26109660574412535	31	0	1.2380952380952381	14	0	1.0264900662251655	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006366	Chromosome_2A	12984	9	276	33.69531731361676	0.7492344753098164	0.7150025087807326	276	0	0.48205677557579	36	0	0.7458975634012929	240	0	0.40705563093622793	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006367	Chromosome_2A	10545	10	270	33.712660028449505	0.9095058963032625	0.5585585585585585	210	0	0.5384238864415076	33	0	0.5631003643590593	177	0	0.583941605839416	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006368	Chromosome_2A	1930	6	53	36.21761658031088	0.8447156754257024	0.744006613392119	52	0	0.6890215893431327	36	0	0.8264462809917356	16	0	0.21291696238466998	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006369	Chromosome_2A	3006	3	70	38.5894876912841	0.6274151996565049	0.7372654155495979	57	0	0.8084577114427861	34	0	0.6540697674418605	23	0	0.32967032967032966	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006370	Chromosome_2A	1502	4	37	34.753661784287615	0.8167842445620224	0.6805444355484388	37	0	0.7708479327259986	24	0	0.5602240896358543	13	0	0.606826801517067	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006371	Chromosome_2A	1149	1	50	42.03655352480418	0.9852512433544847	0.17942583732057416	50	0	0.17942583732057416	50	0	NA	NA	NA	0.6216696269982238	41	0	unmethylated (<10%)	Q924H0	Neuropeptide FF receptor 2 (G protein-coupled receptor 74) (Neuropeptide NPFF receptor)	cellular response to hormone stimulus [GO:0032870]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]; regulation of MAPK cascade [GO:0043408]	hit with GO BP
GN006372	Chromosome_2A	450	1	13	42	0.7109868740884784	0.6578947368421053	13	0	0.6578947368421053	13	0	NA	NA	NA	11.165946946329425	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006373	Chromosome_2A	258	1	2	49.224806201550386	0.12977867203219315	0	2	0	0	2	0	NA	NA	NA	0.5798629414865577	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006374	Chromosome_2A	5717	6	71	35.07084135035858	0.40960821987478857	85.51597695128339	71	0.9014084507042254	87.1875	23	0.8695652173913043	84.95451364590623	48	0.9166666666666666	89.42408376963351	61	0.9672131147540983	methylated (>=50%)	P36964	Proteolipid protein DM beta	neuron projection development [GO:0031175]	hit with GO BP
GN006375	Chromosome_2A	726	1	19	45.59228650137741	0.5056451612903226	86.45962732919254	19	0.8947368421052632	86.45962732919254	19	0.8947368421052632	NA	NA	NA	73.56426618049225	18	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006376	Chromosome_2A	13835	11	302	33.2128659197687	0.7940278913278882	1.102913778970117	296	0	1.0662177328843996	20	0	1.1055236270753512	276	0	1.1853448275862069	41	0	unmethylated (<10%)	P52430	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)	blood circulation [GO:0008015]; carboxylic acid catabolic process [GO:0046395]; cholesterol metabolic process [GO:0008203]; lactone catabolic process [GO:1901335]; organophosphate catabolic process [GO:0046434]; phosphatidylcholine metabolic process [GO:0046470]; positive regulation of cholesterol efflux [GO:0010875]; response to fluoride [GO:1902617]; response to toxic substance [GO:0009636]	hit with GO BP
GN006377	Chromosome_2A	1701	1	52	48.67724867724868	0.5168400140236064	0.5263157894736842	25	0	0.5263157894736842	25	0	NA	NA	NA	1.4336917562724014	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006378	Chromosome_2A	10854	7	292	38.032061912658925	0.7504603109656302	3.041855293463585	258	0	1.0204081632653061	13	0	3.1408814463050905	245	0	0.8573388203017832	47	0	unmethylated (<10%)	P27169	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (K-45) (Serum aryldialkylphosphatase 1)	carboxylic acid catabolic process [GO:0046395]; lactone catabolic process [GO:1901335]; organophosphate catabolic process [GO:0046434]; phosphatidylcholine metabolic process [GO:0046470]; positive regulation of cholesterol efflux [GO:0010875]; response to toxic substance [GO:0009636]	hit with GO BP
GN006379	Chromosome_2A	1186	3	14	34.991568296795954	0.3868232224396608	57.49440715883669	13	0.6923076923076923	64.3312101910828	5	1	56.03799185888738	8	0.5	43.22548028311426	41	0.5121951219512195	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006380	Chromosome_2A	14334	5	306	35.70531603181247	0.670808787094643	7.587976539589443	278	0.07194244604316546	42.96875	26	0.34615384615384615	4.716233354470513	252	0.04365079365079365	0.8073394495412844	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006381	Chromosome_2A	7441	7	217	36.09729875016799	0.8952514493042896	0.8756727173219009	215	0	0.8756567425569177	25	0	0.8756745748905407	190	0	0.9099181073703366	49	0	unmethylated (<10%)	P52430	Serum paraoxonase/arylesterase 1 (PON 1) (EC 3.1.1.2) (EC 3.1.1.81) (EC 3.1.8.1) (Aromatic esterase 1) (A-esterase 1) (Serum aryldialkylphosphatase 1)	blood circulation [GO:0008015]; carboxylic acid catabolic process [GO:0046395]; cholesterol metabolic process [GO:0008203]; lactone catabolic process [GO:1901335]; organophosphate catabolic process [GO:0046434]; phosphatidylcholine metabolic process [GO:0046470]; positive regulation of cholesterol efflux [GO:0010875]; response to fluoride [GO:1902617]; response to toxic substance [GO:0009636]	hit with GO BP
GN006382	Chromosome_2A	7318	4	118	34.27165892320306	0.550437756367148	84.65268517396048	118	0.864406779661017	73.62204724409449	10	0.7	85.37656633509883	108	0.8796296296296297	1.1861969805895038	42	0	methylated (>=50%)	Q5EAE6	Death-associated protein 1 (DAP-1)	apoptotic signaling pathway [GO:0097190]; negative regulation of autophagy [GO:0010507]; ribosome hibernation [GO:0141014]	hit with GO BP
GN006383	Chromosome_2A	31319	49	424	36.731696414317184	0.4045294852868983	90.79417819350644	423	0.983451536643026	95.27307569466625	186	1	88.4947529514648	237	0.9704641350210971	91.61554192229039	10	1	methylated (>=50%)	P13395	Spectrin alpha chain	actin cytoskeleton organization [GO:0030036]; axon midline choice point recognition [GO:0016199]; central nervous system development [GO:0007417]; cytoskeleton organization [GO:0007010]; fusome organization [GO:0045478]; germarium-derived female germ-line cyst formation [GO:0030727]; germarium-derived oocyte fate determination [GO:0007294]; long-term strengthening of neuromuscular junction [GO:0042062]; maintenance of presynaptic active zone structure [GO:0048790]; negative regulation of microtubule depolymerization [GO:0007026]; neuromuscular synaptic transmission [GO:0007274]; oocyte construction [GO:0007308]; ovarian fusome organization [GO:0030723]; plasma membrane organization [GO:0007009]; positive regulation of hippo signaling [GO:0035332]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN006384	Chromosome_2A	22610	15	254	34.09553295002211	0.3876131500704231	84.40949935815148	249	0.9317269076305221	90.0417412045319	59	1	82.86438737117618	190	0.9105263157894737	89.59193030719854	35	0.9714285714285714	methylated (>=50%)	Q16549	Proprotein convertase subtilisin/kexin type 7 (EC 3.4.21.-) (Lymphoma proprotein convertase) (Prohormone convertase 7) (Proprotein convertase 7) (PC7) (Proprotein convertase 8) (PC8) (hPC8) (Subtilisin/kexin-like protease PC7)	peptide hormone processing [GO:0016486]; protein processing [GO:0016485]	hit with GO BP
GN006385	Chromosome_2A	8491	8	96	35.272641620539396	0.36358283889856796	76.64089192591261	96	0.84375	53.05917753259779	25	0.56	81.79228746713409	71	0.9436619718309859	0.5758157389635317	63	0	methylated (>=50%)	Q9BTY2	Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]; regulation of entry of bacterium into host cell [GO:2000535]; response to bacterium [GO:0009617]	hit with GO BP
GN006386	Chromosome_2A	9400	14	263	36.202127659574465	0.8540612995052925	0.6711409395973155	263	0	0.683371298405467	90	0	0.6649076517150396	173	0	0.599250936329588	24	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN006387	Chromosome_2A	537	1	26	42.08566108007449	1.11047482701026	0.5438066465256798	26	0	0.5438066465256798	26	0	NA	NA	NA	0.7276905400229797	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006388	Chromosome_2A	7993	14	246	36.544476416864754	0.9218679674138086	0.6710945067109451	246	0	0.4502118644067797	78	0	0.7492039707810452	168	0	0.74131876706984	66	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN006389	Chromosome_2A	2022	3	63	44.55984174085064	0.6743282444364452	0.6	54	0	0.5988023952095808	27	0	0.6006006006006006	27	0	2.394331785976057	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006390	Chromosome_2A	468	1	17	40.598290598290596	0.8935309973045822	1.0248901903367496	17	0	1.0248901903367496	17	0	NA	NA	NA	0.8979292651640095	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006391	Chromosome_2A	270	1	14	52.592592592592595	0.7719011639779457	0.7575757575757576	14	0	0.7575757575757576	14	0	NA	NA	NA	0.5190311418685121	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006392	Chromosome_2A	42576	8	1049	35.01972942502818	0.80393061815838	5.209113274146968	900	0.006666666666666667	0.4835367257655998	222	0	6.383790590300301	678	0.008849557522123894	0.9400705052878966	33	0	unmethylated (<10%)	A5ABG0	Hybrid PKS-NRPS synthetase pynA (EC 2.3.1.-) (EC 6.3.2.-) (Pyranonigrin biosynthesis cluster protein A)	fatty acid biosynthetic process [GO:0006633]; lactone biosynthetic process [GO:1901336]; secondary metabolic process [GO:0019748]; secondary metabolite biosynthetic process [GO:0044550]	hit with GO BP
GN006393	Chromosome_2A	591	1	31	50.08460236886633	0.8536085356194381	0.3048780487804878	31	0	0.3048780487804878	31	0	NA	NA	NA	0.32051282051282054	43	0	unmethylated (<10%)	Q3UWM4	Lysine-specific demethylase 7A (JmjC domain-containing histone demethylation protein 1D) (Lysine-specific demethylase 7) ([histone H3]-dimethyl-L-lysine9 demethylase 7A) (EC 1.14.11.65)	chromatin remodeling [GO:0006338]; midbrain development [GO:0030901]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006394	Chromosome_2A	156	1	8	57.69230769230769	0.6274509803921569	0	5	0	0	5	0	NA	NA	NA	0.5532503457814661	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006395	Chromosome_2A	3303	3	84	35.240690281562216	0.8191964285714286	0.949667616334283	84	0	0.4830917874396135	18	0	1.0638297872340425	66	0	0.7470288624787776	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006396	Chromosome_2A	49088	15	660	36.01898631029987	0.41738909964995213	60.20753686510104	641	0.6365054602184087	88.80230391326444	127	0.984251968503937	54.71237425529837	514	0.5505836575875487	39.92700729927007	26	0.38461538461538464	methylated (>=50%)	Q6PDH0	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha)	basement membrane organization [GO:0071711]	hit with GO BP
GN006397	Chromosome_2A	18076	12	269	34.543040495684885	0.5088412778891399	88.70330808571244	255	0.9647058823529412	91.55844155844156	64	0.984375	87.94726930320151	191	0.9581151832460733	85.26717557251908	21	0.9523809523809523	methylated (>=50%)	Q5M9H0	Ankyrin repeat and SAM domain-containing protein 3	NA	hit, no GO BP
GN006398	Chromosome_2A	32596	7	833	35.71910663885139	0.8012675815769709	0.9139111667688045	806	0	0.6279434850863422	65	0	0.9404297443661562	741	0	0.5561172901921132	63	0	unmethylated (<10%)	Q7RTX9	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)	carboxylic acid transmembrane transport [GO:1905039]	hit with GO BP
GN006399	Chromosome_2A	1145	2	38	41.222707423580786	0.7949209829176943	23.5015092712376	38	0	23.828125	33	0	21.03321033210332	5	0	13.10724106324473	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006400	Chromosome_2A	21117	8	568	36.364066865558556	0.8136512381355518	0.8307586680398215	434	0	0.3013863773357444	59	0	0.8988067565473423	375	0	1.4238773274917853	33	0	unmethylated (<10%)	Q8NDA2	Hemicentin-2	homophilic cell-cell adhesion [GO:0007156]; synapse organization [GO:0050808]	hit with GO BP
GN006401	Chromosome_2A	219	1	3	47.48858447488585	0.2437847866419295	15.846994535519126	3	0	15.846994535519126	3	0	NA	NA	NA	2.0605550883095036	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006402	Chromosome_2A	544	3	2	41.544117647058826	0.08537350910232266	40.90909090909091	2	0	40.90909090909091	2	0	NA	NA	NA	71.31979695431473	16	0.9375	NA	NA	NA	NA	no Swiss-Prot hit
GN006403	Chromosome_2A	324	2	4	36.111111111111114	0.3793911007025761	64.0625	4	1	64.0625	4	1	NA	NA	NA	75.86206896551724	7	1	NA	NA	NA	NA	no Swiss-Prot hit
GN006404	Chromosome_2A	2784	4	59	37.57183908045977	0.6184151079786754	22.606258757589913	52	0.15384615384615385	10.069444444444445	16	0	24.55477603885591	36	0.2222222222222222	3.0913978494623655	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006405	Chromosome_2A	324	2	5	36.111111111111114	0.47368421052631576	NA	0	NA	NA	NA	NA	NA	NA	NA	29.032258064516128	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006406	Chromosome_2A	64292	6	1582	35.61251788713992	0.7760768587388641	1.351726050187162	1512	0	1.0141987829614605	33	0	1.357593709228111	1479	0	0.5008347245409015	34	0	unmethylated (<10%)	A2ASS6	Titin (EC 2.7.11.1) (Connectin)	adult heart development [GO:0007512]; cardiac muscle cell development [GO:0055013]; cardiac muscle contraction [GO:0060048]; cardiac muscle hypertrophy [GO:0003300]; cardiac muscle tissue development [GO:0048738]; cardiac muscle tissue morphogenesis [GO:0055008]; cardiac myofibril assembly [GO:0055003]; detection of muscle stretch [GO:0035995]; forward locomotion [GO:0043056]; heart development [GO:0007507]; heart growth [GO:0060419]; heart morphogenesis [GO:0003007]; in utero embryonic development [GO:0001701]; muscle contraction [GO:0006936]; positive regulation of gene expression [GO:0010628]; positive regulation of protein secretion [GO:0050714]; regulation of relaxation of cardiac muscle [GO:1901897]; response to calcium ion [GO:0051592]; sarcomere organization [GO:0045214]; sarcomerogenesis [GO:0048769]; skeletal muscle myosin thick filament assembly [GO:0030241]; skeletal muscle thin filament assembly [GO:0030240]; somitogenesis [GO:0001756]; striated muscle cell development [GO:0055002]; ventricular system development [GO:0021591]	hit with GO BP
GN006407	Chromosome_2A	1419	1	50	41.29668780831572	0.8270676691729323	0.6500541711809318	50	0	0.6500541711809318	50	0	NA	NA	NA	0.24673951357067325	48	0	unmethylated (<10%)	Q03601	RING finger protein nhl-1	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]	hit with GO BP
GN006408	Chromosome_2A	1425	1	41	39.78947368421053	0.7319594086695064	0.4992867332382311	41	0	0.4992867332382311	41	0	NA	NA	NA	4.461604461604462	53	0	unmethylated (<10%)	Q03601	RING finger protein nhl-1	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]	hit with GO BP
GN006409	Chromosome_2A	956	2	42	43.72384937238494	0.9295089936801166	1.0338345864661653	42	0	0.9823182711198428	40	0	2.1739130434782608	2	0	0.497893527384144	66	0	unmethylated (<10%)	Q03601	RING finger protein nhl-1	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]	hit with GO BP
GN006410	Chromosome_2A	1455	1	57	40.48109965635739	0.9574578619256523	0.6914893617021277	57	0	0.6914893617021277	57	0	NA	NA	NA	0.6596818005432674	74	0	unmethylated (<10%)	Q9R1R2	Tripartite motif-containing protein 3 (EC 2.3.2.27) (RING finger protein 22) (RING finger protein HAC1)	neural precursor cell proliferation [GO:0061351]; positive regulation of toll-like receptor 3 signaling pathway [GO:0034141]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation protein catabolic process at postsynapse [GO:0140252]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN006411	Chromosome_2A	1239	1	56	42.292171105730425	1.0113106343283582	0.45871559633027525	56	0	0.45871559633027525	56	0	NA	NA	NA	0.5400098183603338	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006412	Chromosome_2A	2199	6	54	35.243292405638925	0.79325824682352	0.8389261744966443	54	0	0.7032348804500703	28	0	0.962772785622593	26	0	0.9199134199134199	43	0	unmethylated (<10%)	Q8K3K7	1-acyl-sn-glycerol-3-phosphate acyltransferase beta (EC 2.3.1.51) (1-acylglycerol-3-phosphate O-acyltransferase 2) (1-AGP acyltransferase 2) (1-AGPAT 2) (Lysophosphatidic acid acyltransferase beta) (LPAAT-beta)	CDP-diacylglycerol biosynthetic process [GO:0016024]; epidermis development [GO:0008544]; phosphatidic acid biosynthetic process [GO:0006654]; phospholipid biosynthetic process [GO:0008654]; positive regulation of cytokine production [GO:0001819]; response to xenobiotic stimulus [GO:0009410]; triglyceride biosynthetic process [GO:0019432]	hit with GO BP
GN006413	Chromosome_2A	23010	18	328	34.18079096045198	0.4880865260522605	79.88433375308988	325	0.9384615384615385	87.50754375377187	35	0.9714285714285714	79.24585523655479	290	0.9344827586206896	94.14739884393063	31	1	methylated (>=50%)	Q99PR0	Protein O-mannosyl-transferase 1 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 1)	extracellular matrix organization [GO:0030198]; positive regulation of protein O-linked glycosylation [GO:1904100]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via mannose [GO:0035269]	hit with GO BP
GN006414	Chromosome_2A	8589	16	70	33.263476539760156	0.29730716053192185	82.2310405643739	69	0.8985507246376812	87.05463182897863	14	0.9285714285714286	81.13156469951272	55	0.8909090909090909	34.21052631578947	54	0.3148148148148148	methylated (>=50%)	Q95T19	Serine--tRNA synthetase-like protein Slimp (Seryl-tRNA synthetase-like insect mitochondrial protein)	mitochondrial seryl-tRNA aminoacylation [GO:0070158]	hit with GO BP
GN006415	Chromosome_2A	2421	1	31	38.49648905410987	0.3458778636508178	66.9365721997301	31	0.7419354838709677	66.9365721997301	31	0.7419354838709677	NA	NA	NA	82.91107799304521	29	0.896551724137931	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006416	Chromosome_2A	68967	22	974	36.00997578552061	0.43840556517667545	84.51982420790429	961	0.9417273673257024	82.75154004106776	51	0.9019607843137255	84.59088358583358	910	0.9439560439560439	25.93312597200622	41	0.24390243902439024	methylated (>=50%)	D2H3M0	Tudor domain-containing protein 5	P granule organization [GO:0030719]; spermatid development [GO:0007286]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN006417	Chromosome_2A	1037	2	15	37.994214079074254	0.41032472499934053	74.10313901345292	15	0.6666666666666666	77.85630153121319	14	0.7142857142857143	0	1	0	12.621809744779583	39	0.20512820512820512	methylated (>=50%)	D4A6D7	Tetratricopeptide repeat protein 19, mitochondrial (TPR repeat protein 19)	mitochondrial respiratory chain complex III assembly [GO:0034551]	hit with GO BP
GN006418	Chromosome_2A	3863	3	86	40.09836914315299	0.5551363201903603	87.00750469043152	86	0.7906976744186046	59.219858156028366	33	0.45454545454545453	97.00255102040816	53	1	63.900862068965516	36	0.6666666666666666	methylated (>=50%)	Q9PUB8	Zinc transporter Slc39a7 (Histidine-rich membrane protein Ke4) (Solute carrier family 39 member 7) (Zrt-, Irt-like protein 7) (ZIP7)	B cell differentiation [GO:0030183]; intracellular zinc ion homeostasis [GO:0006882]; regulation of ferroptosis [GO:0110075]; skin epidermis development [GO:0098773]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN006419	Chromosome_2A	7971	4	160	32.30460419018944	0.7768750296956606	0.4995836802664446	160	0	0.5434782608695652	10	0	0.49690812720848054	150	0	0.6120527306967984	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006420	Chromosome_2A	258	1	6	56.201550387596896	0.2946326608298439	7.874015748031496	6	0	7.874015748031496	6	0	NA	NA	NA	1.9787544261612164	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006421	Chromosome_2A	156	1	12	57.05128205128205	0.9454545454545454	1.2195121951219512	12	0	1.2195121951219512	12	0	NA	NA	NA	0.4579077139837971	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006422	Chromosome_2A	12562	9	375	35.830281802260785	0.9301980710250138	1.0404110892596588	371	0	0.7720815318097591	94	0	1.1097804391217565	277	0	0.6093432633716994	58	0	unmethylated (<10%)	A4IGL7	Peroxidasin (EC 1.11.2.-) [Cleaved into: PXDN active fragment]	angiogenesis [GO:0001525]; basement membrane assembly [GO:0070831]; basement membrane organization [GO:0071711]; cell adhesion [GO:0007155]; protein homooligomerization [GO:0051260]; protein homotrimerization [GO:0070207]; response to oxidative stress [GO:0006979]	hit with GO BP
GN017525	Chromosome_2A	1894	3	4	45.19535374868004	0.042273247217029825	4.721030042918455	4	0	4.721030042918455	4	0	NA	NA	NA	10.147299509001636	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006423	Chromosome_2A	10998	11	283	35.16093835242771	0.8327092452083088	0.5316734746806717	283	0	0.2538787023977433	88	0	0.6145815793904698	195	0	0.5378409527468305	49	0	unmethylated (<10%)	Q7QH73	Chorion peroxidase (EC 1.11.1.7)	cellular process involved in reproduction in multicellular organism [GO:0022412]; response to oxidative stress [GO:0006979]	hit with GO BP
GN006424	Chromosome_2A	3278	5	97	37.06528370957901	0.8668647764449291	0.49527239981990095	97	0	0.5952380952380952	31	0	0.46592894583576006	66	0	0.9683666881859264	37	0	unmethylated (<10%)	A4IGL7	Peroxidasin (EC 1.11.2.-) [Cleaved into: PXDN active fragment]	angiogenesis [GO:0001525]; basement membrane assembly [GO:0070831]; basement membrane organization [GO:0071711]; cell adhesion [GO:0007155]; protein homooligomerization [GO:0051260]; protein homotrimerization [GO:0070207]; response to oxidative stress [GO:0006979]	hit with GO BP
GN006425	Chromosome_2A	2874	3	94	38.413361169102295	0.8866207421653216	1.022542412270509	94	0	1.040391676866585	45	0	1.0116148370176097	49	0	2.3136246786632393	8	0	unmethylated (<10%)	A0A1Y9G8H0	Salivary peroxidase/catechol oxidase (EC 1.10.3.1) (EC 1.11.1.-)	cellular process involved in reproduction in multicellular organism [GO:0022412]; response to oxidative stress [GO:0006979]	hit with GO BP
GN006426	Chromosome_2A	2493	1	40	39.06939430405134	0.4208074337582763	70.8976833976834	40	0.775	70.8976833976834	40	0.775	NA	NA	NA	0.6307977736549165	66	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006427	Chromosome_2A	477	1	13	41.719077568134175	0.6741682974559687	0.9316770186335404	13	0	0.9316770186335404	13	0	NA	NA	NA	0.6221484861053505	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006428	Chromosome_2A	603	1	15	43.946932006633496	0.5401935021500239	1.6129032258064515	13	0	1.6129032258064515	13	0	NA	NA	NA	0.4694835680751174	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006429	Chromosome_2A	603	1	16	44.44444444444444	0.5637160385626643	0.9975062344139651	12	0	0.9975062344139651	12	0	NA	NA	NA	0.3707448601280755	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006430	Chromosome_2A	780	2	39	47.17948717948718	0.8987502585162643	92.81594126900892	39	1	93.058568329718	31	1	92.17557251908397	8	1	78.85051676329721	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006431	Chromosome_2A	41380	36	555	36.11406476558724	0.4159037987832506	93.75314563164284	548	0.9908759124087592	96.31214043369228	122	1	93.11060078524335	426	0.9882629107981221	90.63211845102505	48	1	methylated (>=50%)	B0KWH8	THO complex subunit 2 (Tho2)	generation of neurons [GO:0048699]; mRNA export from nucleus [GO:0006406]; mRNA processing [GO:0006397]; neuron development [GO:0048666]	hit with GO BP
GN006432	Chromosome_2A	10349	4	155	36.148420137211325	0.45862996700575825	94.98271512660001	155	1	91.11111111111111	7	1	95.15263825221886	148	1	97.28535353535354	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006433	Chromosome_2A	44751	17	788	35.29530066367232	0.5653924267743142	82.41865575972163	529	0.9149338374291115	87.64478764478764	42	0.9523809523809523	82.06581948517433	487	0.9117043121149897	69.31608133086876	13	0.9230769230769231	methylated (>=50%)	P70581	Nucleoporin p58/p45 (58 kDa nucleoporin) (Nucleoporin-like protein 1)	nucleocytoplasmic transport [GO:0006913]; regulation of protein import into nucleus [GO:0042306]	hit with GO BP
GN006434	Chromosome_2A	31159	14	397	35.32205783240797	0.40926889883740997	83.34191776118122	380	0.9552631578947368	93.97399302251824	65	0.9846153846153847	81.67783569123853	315	0.9492063492063492	86.30006357279085	47	1	methylated (>=50%)	Q5F452	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR8 (EC 3.1.3.95) (Myotubularin-related protein 8) (Phosphatidylinositol-3-phosphate phosphatase)	phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN006435	Chromosome_2A	19178	12	285	39.01345291479821	0.3926995092522448	79.47309705655196	239	0.8493723849372385	90.70663811563169	104	1	71.96047544035515	135	0.7333333333333333	58.76598946576373	28	0.6785714285714286	methylated (>=50%)	O75808	Calpain-15 (EC 3.4.22.-) (Small optic lobes homolog)	brain development [GO:0007420]; cell adhesion [GO:0007155]; proteolysis [GO:0006508]	hit with GO BP
GN006436	Chromosome_2A	2218	3	39	41.38863841298467	0.41234430191485405	90.98173515981735	36	1	94.08866995073892	19	1	88.29787234042553	17	1	92.05776173285199	23	1	methylated (>=50%)	O75808	Calpain-15 (EC 3.4.22.-) (Small optic lobes homolog)	brain development [GO:0007420]; cell adhesion [GO:0007155]; proteolysis [GO:0006508]	hit with GO BP
GN006437	Chromosome_2A	342	1	0	48.538011695906434	0	NA	0	NA	NA	NA	NA	NA	NA	NA	16.132264529058116	25	0.04	NA	NA	NA	NA	no Swiss-Prot hit
GN006438	Chromosome_2A	567	1	33	56.4373897707231	0.7633715474684836	1.0526315789473684	8	0	1.0526315789473684	8	0	NA	NA	NA	0.9082217973231358	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006439	Chromosome_2A	1068	1	50	42.60299625468165	1.0317644331092046	0.8560727661851257	50	0	0.8560727661851257	50	0	NA	NA	NA	1.8562401263823065	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006440	Chromosome_2A	18162	4	479	35.398083911463495	0.8421390623635696	1.047100038925652	477	0	0.4922067268252666	51	0	1.074741530791549	426	0	0.8115419296663661	31	0	unmethylated (<10%)	A0A1B0GTI8	Transmembrane protein 272	NA	hit, no GO BP
GN006441	Chromosome_2A	34906	12	592	38.2283848049046	0.4876181918319209	70.89295560164885	589	0.8760611205432938	89.04465212876428	43	1	69.9261635463621	546	0.8663003663003663	2	14	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006442	Chromosome_2A	3441	4	105	37.75065387968614	0.8682085786375106	1.2170385395537526	105	0	0.8956796628029505	54	0	1.4572666404096102	51	0	0.4155844155844156	45	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006443	Chromosome_2A	1063	3	25	35.37158984007526	0.7526622861674408	0.375	25	0	0.48496605237633367	17	0	0.1757469244288225	8	0	0.6134969325153374	59	0	unmethylated (<10%)	P18293	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN006444	Chromosome_2A	1053	1	31	38.84140550807218	0.7995248358969335	0.2822865208186309	31	0	0.2822865208186309	31	0	NA	NA	NA	0.5555555555555556	45	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006445	Chromosome_2A	531	1	16	40.67796610169491	0.8985721840296139	0.5431093007467753	16	0	0.5431093007467753	16	0	NA	NA	NA	2.8109745834034676	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006446	Chromosome_2A	756	2	29	41.666666666666664	1.12987012987013	1.5425131677953348	29	0	1.4785992217898833	28	0	3.409090909090909	1	0	2.148124398845784	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006447	Chromosome_2A	17633	13	337	37.14625985368343	0.5654291396273812	41.667877379049834	330	0.403030303030303	49.41036657829783	99	0.5252525252525253	38.06014653262907	231	0.35064935064935066	2.318623784592371	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006448	Chromosome_2A	465	1	22	50.96774193548387	0.7354421279654925	1.3440860215053763	22	0	1.3440860215053763	22	0	NA	NA	NA	0.5117707267144319	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006449	Chromosome_2A	363	1	16	44.62809917355372	0.8886168910648715	0	16	0	0	16	0	NA	NA	NA	0.24464831804281345	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006450	Chromosome_2A	18459	11	303	35.87951676688878	0.5127636323297924	85.98240469208211	285	0.8982456140350877	41.05882352941177	16	0.3125	87.92962774094849	269	0.9330855018587361	1.069703243616287	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006451	Chromosome_2A	699	1	16	38.483547925608015	0.6213333333333333	0.5780346820809249	16	0	0.5780346820809249	16	0	NA	NA	NA	0.11547344110854503	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006452	Chromosome_2A	489	1	11	39.877300613496935	0.5662105263157895	2.4217961654894045	11	0	2.4217961654894045	11	0	NA	NA	NA	0.5674908796108634	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006453	Chromosome_2A	558	1	16	43.54838709677419	0.6048780487804878	10.184595798854232	14	0	10.184595798854232	14	0	NA	NA	NA	1.485842444631343	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006454	Chromosome_2A	3831	7	86	34.4296528321587	0.7575707407254115	1.0566480774875258	86	0	1.4478764478764479	23	0	0.8857022353437368	63	0	1.3031550068587106	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006455	Chromosome_2A	17862	21	534	35.91423132907849	0.9287575051368232	0.6643386423643642	523	0	0.725063688026651	132	0	0.647478100005441	391	0	0.6478781988986071	92	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006456	Chromosome_2A	312	1	31	54.80769230769231	1.3362807405360597	0.6153846153846154	26	0	0.6153846153846154	26	0	NA	NA	NA	2.5988388166989216	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006457	Chromosome_2A	9962	3	124	36.24774141738607	0.37896687343923524	44.99574709384746	124	0.43548387096774194	28.907563025210084	18	0.16666666666666666	46.47778293853538	106	0.4811320754716981	1.1580381471389645	54	0	sparse (10-50%)	Q291A0	Large ribosomal subunit protein mL41 (39S ribosomal protein L41, mitochondrial) (L41mt) (MRP-L41)	translation [GO:0006412]	hit with GO BP
GN006458	Chromosome_2A	1656	1	72	43.35748792270532	0.9296407185628742	0.5816554809843401	71	0	0.5816554809843401	71	0	NA	NA	NA	0.6425431180250254	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012969	Chromosome_2A	618	1	17	47.57281553398058	0.48638888888888887	77.77777777777777	1	1	77.77777777777777	1	1	NA	NA	NA	18.82920941460471	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006459	Chromosome_2A	8888	7	228	36.937443744374434	0.7522947904562852	1.5335169880624426	224	0	0.6752608962553714	38	0	1.6844833171363784	186	0	1.3568023469013568	40	0	unmethylated (<10%)	Q96SJ8	Tetraspanin-18 (Tspan-18)	calcium-ion regulated exocytosis [GO:0017156]; calcium-mediated signaling [GO:0019722]; inflammatory response [GO:0006954]; protein localization to cell periphery [GO:1990778]; regulation of sprouting angiogenesis [GO:1903670]; regulation of store-operated calcium entry [GO:2001256]	hit with GO BP
GN006460	Chromosome_2A	1707	1	2	35.4422964264792	0.03736292599645413	4.081632653061225	2	0	4.081632653061225	2	0	NA	NA	NA	0.2347417840375587	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006461	Chromosome_2A	582	1	31	44.67353951890034	1.0819790104947526	0.16155088852988692	31	0	0.16155088852988692	31	0	NA	NA	NA	0.40719375636240246	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006462	Chromosome_2A	1185	1	22	39.57805907172996	0.47410344075070926	91.6796267496112	22	1	91.6796267496112	22	1	NA	NA	NA	84.75675675675676	55	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006463	Chromosome_2A	357	1	7	47.338935574229694	0.35147679324894515	93.86973180076629	7	1	93.86973180076629	7	1	NA	NA	NA	74.9034749034749	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006464	Chromosome_2A	759	1	15	40.18445322793149	0.4976831613918517	91.58653846153847	15	0.9333333333333333	91.58653846153847	15	0.9333333333333333	NA	NA	NA	78.93504973668813	35	0.9428571428571428	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006465	Chromosome_2A	1653	1	22	38.59649122807018	0.36251084063518646	3.585147247119078	22	0	3.585147247119078	22	0	NA	NA	NA	1.7398181099248715	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006466	Chromosome_2A	1080	1	13	40	0.30115830115830117	0.9326424870466321	13	0	0.9326424870466321	13	0	NA	NA	NA	1.8240343347639485	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006467	Chromosome_2A	864	1	16	40.39351851851852	0.45482661051523327	0.9562841530054644	16	0	0.9562841530054644	16	0	NA	NA	NA	0.8746355685131195	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006468	Chromosome_2A	198	1	10	43.43434343434343	1.076086956521739	1.3215859030837005	10	0	1.3215859030837005	10	0	NA	NA	NA	0.9757539917208752	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006469	Chromosome_2A	1812	3	23	34.216335540838855	0.4462289605550559	0.4961958319550116	23	0	0.5307855626326964	22	0	0	1	0	0.4234297812279464	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006470	Chromosome_2A	240	1	11	55.416666666666664	0.6596701649175413	0	11	0	0	11	0	NA	NA	NA	0.4476776720761052	112	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006471	Chromosome_2A	2781	2	110	39.482200647249194	1.0156205906276456	0.942079553384508	110	0	0.19047619047619047	11	0	1.0178605723065104	99	0	0.6846709775580069	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006472	Chromosome_2A	923	2	9	35.2112676056338	0.3178617892400704	46.285714285714285	5	0.2	46.285714285714285	5	0.2	NA	NA	NA	70.79940784603997	42	0.8809523809523809	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006473	Chromosome_2A	333	1	15	51.051051051051054	0.7201557093425606	91.63763066202091	15	1	91.63763066202091	15	1	NA	NA	NA	26.929748482220294	31	0.0967741935483871	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006474	Chromosome_2A	882	1	24	50.11337868480726	0.44455645161290325	82.87878787878788	24	1	82.87878787878788	24	1	NA	NA	NA	35.326299335678	47	0.48936170212765956	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006475	Chromosome_2A	3979	2	55	37.421462679065094	0.3975400455587486	57.61428185014877	55	0.6909090909090909	66.72443674176776	25	0.76	49.593082400813834	30	0.6333333333333333	1.280558789289872	52	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006476	Chromosome_2A	4967	7	38	34.487618280652306	0.25925152669763557	74.4039270687237	28	0.8928571428571429	71.27371273712737	10	0.9	75.49668874172185	18	0.8888888888888888	6.507352941176471	41	0	methylated (>=50%)	D4A7U2	Calcium-responsive transcription factor (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein) (Calcium-response factor) (CaRF)	cellular response to calcium ion [GO:0071277]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006477	Chromosome_2A	12018	7	130	35.63820935263771	0.34129739058250413	65.62382208820203	106	0.78301886792452835	74.83128225486304	33	0.9696969696969697	61.36029411764706	73	0.6986301369863014	86.80257510729614	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006478	Chromosome_2A	813	1	24	38.745387453874535	0.8094922004646532	0.9009009009009009	24	0	0.9009009009009009	24	0	NA	NA	NA	0.7006617360840794	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006479	Chromosome_2A	4309	7	112	35.692736133673705	0.8161316070727979	1.0917386345119766	112	0	0.5216095380029806	56	0	1.5348971908485376	56	0	0.591715976331361	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006480	Chromosome_2A	16201	10	611	37.41127090920313	1.0786990199005735	0.9028474419322479	588	0	0.7040417209908736	108	0	0.9373726395870127	480	0	0.8123476848090982	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006481	Chromosome_2A	4011	3	55	37.17277486910995	0.39726602173928705	68.6543865126444	52	0.6730769230769231	29.859154929577464	6	0.3333333333333333	73.49016853932584	46	0.717391304347826	51.60301087259548	46	0.6086956521739131	methylated (>=50%)	A1A4P5	Prefoldin subunit 2	NA	hit, no GO BP
GN006482	Chromosome_2A	2729	2	74	32.24624404543789	1.0436485788113694	0.7945106536655833	57	0	0.4720161834120027	23	0	0.9124537607891492	34	0	0.6601941747572816	46	0	unmethylated (<10%)	Q9DED6	Homeobox protein BarH-like 1b (Bar class homeoprotein Barx1b)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006483	Chromosome_2A	6934	3	229	38.72223824632247	0.881094722263222	0.8376079475358743	229	0	0.7918552036199095	23	0	0.8435414068803638	206	0	0.5417795374036257	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006484	Chromosome_2A	17537	15	436	35.798597251525344	0.7761032534466267	1.2103998252130217	430	0	0.41479433114414105	63	0	1.325530212084834	367	0	3.076605409869915	72	0	unmethylated (<10%)	A8WHP3	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (Solute carrier family 5 member 9)	NA	hit, no GO BP
GN006485	Chromosome_2A	44647	11	288	35.429032185813156	0.21301035503448695	72.56577467955925	236	0.7923728813559322	51.01892285298399	29	0.5862068965517241	75.03969248767444	207	0.821256038647343	0.9498480243161094	52	0	methylated (>=50%)	Q2TBW5	Zinc finger HIT domain-containing protein 2	NA	hit, no GO BP
GN006486	Chromosome_2A	4160	9	59	35.43269230769231	0.46592063175678883	68.1862506094588	58	0.8103448275862069	84.36161096829477	37	0.972972972972973	46.83257918552036	21	0.5238095238095238	54.728936869279515	49	0.5102040816326531	methylated (>=50%)	Q32LN4	Cilia- and flagella-associated protein 45	establishment of left/right asymmetry [GO:0061966]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN006487	Chromosome_2A	3987	8	47	34.86330574366692	0.3942699161127838	88.03921568627452	46	1	84.99353169469599	14	1	89.06864888500219	32	1	85.8812673023685	37	1	methylated (>=50%)	Q9VUJ0	Large ribosomal subunit protein mL39 (39S ribosomal protein L39, mitochondrial) (MRP-L39) (MRP-L5)	mitochondrial translation [GO:0032543]	hit with GO BP
GN006488	Chromosome_2A	26904	17	471	38.875260184359206	0.4634188032312602	92.45672048239642	414	0.9951690821256038	96.19164619164619	118	1	91.5806157245089	296	0.9932432432432432	93.13754869643392	44	1	methylated (>=50%)	Q9ERU9	E3 SUMO-protein ligase RanBP2 (EC 2.3.2.-) (Ran-binding protein 2) (RanBP2)	centrosome localization [GO:0051642]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; negative regulation of innate immune response [GO:0045824]; negative regulation of RNA export from nucleus [GO:0046832]; negative regulation of transcription by RNA polymerase II [GO:0000122]; NLS-bearing protein import into nucleus [GO:0006607]; nuclear export [GO:0051168]; nucleocytoplasmic transport [GO:0006913]; protein folding [GO:0006457]; protein sumoylation [GO:0016925]; regulation of gluconeogenesis [GO:0006111]; response to amphetamine [GO:0001975]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN006489	Chromosome_2A	18435	16	360	35.579061567670195	0.6230520821070099	88.34948060578503	359	1	96.19640387275243	63	1	87.46643838281645	296	1	96.74666666666667	21	1	methylated (>=50%)	Q99666	RANBP2-like and GRIP domain-containing protein 5/6 (Ran-binding protein 2-like 1/2) (RanBP2-like 1/2) (RanBP2L1) (RanBP2L2) (Sperm membrane protein BS-63)	NLS-bearing protein import into nucleus [GO:0006607]; nuclear export [GO:0051168]	hit with GO BP
GN006490	Chromosome_2A	9563	5	203	34.654397155704274	0.7084934292546342	91.24274389863304	203	0.9556650246305419	92.88425047438331	20	0.95	91.12714638872185	183	0.9562841530054644	49.897645854657114	39	0.3333333333333333	methylated (>=50%)	Q61206	Platelet-activating factor acetylhydrolase IB subunit alpha2 (EC 3.1.1.47) (PAF acetylhydrolase 30 kDa subunit) (PAF-AH 30 kDa subunit) (PAF-AH subunit beta) (PAFAH subunit beta)	positive regulation of macroautophagy [GO:0016239]; spermatogenesis [GO:0007283]	hit with GO BP
GN006491	Chromosome_2A	24712	19	589	35.088216251213986	0.7745567391171543	0.8735672617477208	586	0	0.7533902561526871	142	0	0.8990760483297797	444	0	0.5120481927710844	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006492	Chromosome_2A	788	2	16	54.31472081218274	0.27666717868820084	0.4065040650406504	15	0	0.44642857142857145	14	0	0	1	0	0.8767657087189479	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006493	Chromosome_2A	1359	1	54	44.5916114790287	0.8062180719582532	0.7919366450683946	54	0	0.7919366450683946	54	0	NA	NA	NA	0.3421727972626176	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006494	Chromosome_2A	540	1	27	48.148148148148145	0.8795849420849421	0.49079754601226994	27	0	0.49079754601226994	27	0	NA	NA	NA	1.4701378254211332	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006495	Chromosome_2A	447	1	23	46.5324384787472	1.0368091972569584	0.5977796754910333	23	0	0.5977796754910333	23	0	NA	NA	NA	0.5845816587504568	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006496	Chromosome_2A	447	1	21	46.085011185682326	0.9860294117647059	0.18148820326678766	21	0	0.18148820326678766	21	0	NA	NA	NA	0.7154213036565977	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006497	Chromosome_2A	489	1	24	45.39877300613497	0.99146743262651	0.9730538922155688	24	0	0.9730538922155688	24	0	NA	NA	NA	1.4656616415410386	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006498	Chromosome_2A	591	1	31	47.377326565143825	0.9504565262502593	0.36855036855036855	31	0	0.36855036855036855	31	0	NA	NA	NA	0.4786597526924611	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006499	Chromosome_2A	46674	42	676	34.674551141963406	0.4832123664633634	84.04600811907984	610	0.8475409836065574	95.15989628349179	66	1	82.89375429373638	544	0.8290441176470589	92.79661016949153	9	1	methylated (>=50%)	P70704	Phospholipid-transporting ATPase IA (EC 7.6.2.1) (ATPase class I type 8A member 1) (Chromaffin granule ATPase II) (P4-ATPase flippase complex alpha subunit ATP8A1)	aminophospholipid translocation [GO:0140331]; learning [GO:0007612]; phospholipid translocation [GO:0045332]; positive regulation of cell migration [GO:0030335]; positive regulation of phospholipid translocation [GO:0061092]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN006500	Chromosome_2A	30248	15	382	34.967601163713304	0.4139379217212072	84.62268824306473	380	0.9421052631578948	92.65970515970515	59	1	83.37466615795498	321	0.9314641744548287	68.8376753507014	17	0.9411764705882353	methylated (>=50%)	Q5XJQ5	Exosome complex component RRP45 (Exosome component 9)	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; nuclear mRNA surveillance [GO:0071028]; nuclear polyadenylation-dependent rRNA catabolic process [GO:0071035]; rRNA catabolic process [GO:0016075]; TRAMP-dependent tRNA surveillance pathway [GO:0071038]; U1 snRNA 3'-end processing [GO:0034473]; U4 snRNA 3'-end processing [GO:0034475]; U5 snRNA 3'-end processing [GO:0034476]	hit with GO BP
GN006501	Chromosome_2A	18886	9	485	36.45028063115535	0.7732143648530867	91.52198163668088	483	0.9772256728778468	79.61538461538461	31	0.7741935483870968	92.07808149456604	452	0.9911504424778761	0.6618863761720905	55	0	methylated (>=50%)	P04962	G2/mitotic-specific cyclin-A	mitotic cell cycle phase transition [GO:0044772]	hit with GO BP
GN006502	Chromosome_2A	1336	2	61	46.781437125748504	0.8345382677616893	0.7927519818799547	61	0	0.8777852802160703	54	0	0.3508771929824561	7	0	0.43488212405584803	68	0	unmethylated (<10%)	Q15319	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brain-3C) (Brn-3C)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory perception of sound [GO:0007605]; visual perception [GO:0007601]	hit with GO BP
GN006503	Chromosome_2A	22461	16	305	34.49089532968256	0.4596150765121074	80.47237452551666	305	0.9081967213114754	77.359088030399	64	0.84375	81.01314559155162	241	0.9253112033195021	1.7380245866892752	48	0	methylated (>=50%)	Q3UMC0	ATPase family gene 2 protein homolog A (EC 3.6.4.10) (AFG2 AAA ATPase homolog A) (Ribosome biogenesis protein SPATA5) (Spermatogenesis-associated factor protein) (Spermatogenesis-associated protein 5)	brain development [GO:0007420]; DNA replication [GO:0006260]; regulation of ribosome biogenesis [GO:0090069]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN006504	Chromosome_2A	980	3	17	35.40816326530612	0.5551112888178062	0.5424954792043399	17	0	0.48231511254019294	11	0	0.6198347107438017	6	0	0.4564820450395618	48	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN006505	Chromosome_2A	360	1	12	44.72222222222222	0.6679035250463822	0	12	0	0	12	0	NA	NA	NA	0.34965034965034963	45	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN006506	Chromosome_2A	4620	3	66	40.54112554112554	0.34782330959149127	78.83865939204988	66	0.8939393939393939	73.38308457711443	7	0.8571428571428571	79.852125693160815	59	0.8983050847457628	79.54545454545455	2	1	methylated (>=50%)	O09172	Glutamate--cysteine ligase regulatory subunit (GCS light chain) (Gamma-ECS regulatory subunit) (Gamma-glutamylcysteine synthetase regulatory subunit) (Glutamate--cysteine ligase modifier subunit)	apoptotic mitochondrial changes [GO:0008637]; blood vessel diameter maintenance [GO:0097746]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to follicle-stimulating hormone stimulus [GO:0071372]; cellular response to glucose stimulus [GO:0071333]; cellular response to hepatocyte growth factor stimulus [GO:0035729]; cellular response to leukemia inhibitory factor [GO:1990830]; cellular response to thyroxine stimulus [GO:0097069]; glutamate metabolic process [GO:0006536]; glutathione biosynthetic process [GO:0006750]; glutathione metabolic process [GO:0006749]; hepatic stellate cell activation [GO:0035733]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; negative regulation of neuron apoptotic process [GO:0043524]; regulation of mitochondrial depolarization [GO:0051900]; response to activity [GO:0014823]; response to human chorionic gonadotropin [GO:0044752]; response to nitrosative stress [GO:0051409]; response to nutrient [GO:0007584]; response to oxidative stress [GO:0006979]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN006507	Chromosome_2A	5471	4	134	35.185523670261375	0.7970675086217769	1.670604117448532	131	0	0.8417508417508418	12	0	1.762940735183796	119	0	0.5097312326227988	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006508	Chromosome_2A	7910	7	117	33.76738305941846	0.5189782274426413	77.28689669998926	117	0.905982905982906	59.91150442477876	19	0.7368421052631579	79.68922060442922	98	0.9387755102040817	28.398576512455517	38	0.2894736842105263	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006509	Chromosome_2A	22222	17	209	35.878858788587884	0.29517897854962344	80.78843174384576	189	0.9417989417989417	90.24696525742989	44	1	78.34001516957417	145	0.9241379310344827	72.70531400966183	11	0.9090909090909091	methylated (>=50%)	Q9NPB8	Glycerophosphocholine phosphodiesterase GPCPD1 (EC 3.1.4.2) (Glycerophosphodiester phosphodiesterase 5)	glycerophospholipid catabolic process [GO:0046475]	hit with GO BP
GN006510	Chromosome_2A	246	1	9	49.1869918699187	0.6049180327868853	1.7361111111111112	9	0	1.7361111111111112	9	0	NA	NA	NA	2.586750788643533	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006511	Chromosome_2A	1368	1	54	41.08187134502924	0.935740072202166	0.5038937242327073	54	0	0.5038937242327073	54	0	NA	NA	NA	0.5109708446047491	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006512	Chromosome_2A	471	1	18	39.70276008492569	0.970467032967033	0.5961251862891207	18	0	0.5961251862891207	18	0	NA	NA	NA	0.3980539584254755	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006513	Chromosome_2A	189	1	6	42.32804232804233	0.7127592708988058	0.5102040816326531	6	0	0.5102040816326531	6	0	NA	NA	NA	0.684655658477648	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006514	Chromosome_2A	1095	1	20	40.09132420091324	0.45456432396529534	2.192982456140351	9	0	2.192982456140351	9	0	NA	NA	NA	24.125874125874127	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006515	Chromosome_2A	1677	1	41	42.039355992844364	0.5534386168260408	1.550387596899225	8	0	1.550387596899225	8	0	NA	NA	NA	50.324034939419555	57	0.49122807017543857	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006516	Chromosome_2A	13057	10	183	35.67435092287662	0.4411112003389427	91.48137981517064	176	1	94.99146272054638	31	1	90.8089838639337	145	1	92.44186046511628	38	1	methylated (>=50%)	O00311	Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1)	cell cycle phase transition [GO:0044770]; double-strand break repair via break-induced replication [GO:0000727]; G1/S transition of mitotic cell cycle [GO:0000082]; mitotic DNA replication checkpoint signaling [GO:0033314]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of nuclear cell cycle DNA replication [GO:0010571]	hit with GO BP
GN006517	Chromosome_2A	2207	4	61	37.879474399637516	0.7816970921590487	0.6654991243432574	61	0	0.6395786305492852	58	0	1.015228426395939	3	0	0.3422526446795271	56	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006518	Chromosome_2A	9131	4	220	33.62172817873179	0.8569594198261612	2.008762503099942	214	0	0.8588957055214724	61	0	2.3000414421881477	153	0	0.5758637956935403	55	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006519	Chromosome_2A	909	2	41	41.36413641364136	1.056377551020408	0.7154213036565977	41	0	0.6974716652136007	37	0	0.9009009009009009	4	0	3.027245206861756	44	0	unmethylated (<10%)	Q4ZJM9	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11) (C1qTNF11) (CTRP11)	maintenance of synapse structure [GO:0099558]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of fibroblast proliferation [GO:0048147]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN006520	Chromosome_2A	932	2	39	42.48927038626609	0.9280024509803921	0.47720042417815484	39	0	0.5050505050505051	35	0	0.33112582781456956	4	0	0.7218844984802432	44	0	unmethylated (<10%)	P86437	Cerebellin-1 (Precerebellin) [Cleaved into: Cerebellin (CER); [des-Ser1]-cerebellin]	cerebellar granule cell differentiation [GO:0021707]; heterophilic cell-cell adhesion [GO:0007157]; maintenance of synapse structure [GO:0099558]; negative regulation of excitatory postsynaptic potential [GO:0090394]; negative regulation of inhibitory synapse assembly [GO:1905703]; positive regulation of long-term synaptic depression [GO:1900454]; regulation of postsynaptic density assembly [GO:0099151]; regulation of presynapse assembly [GO:1905606]; synapse organization [GO:0050808]; trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission [GO:0099557]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN006521	Chromosome_2A	537	2	5	37.61638733705773	0.26531620553359686	0.398406374501992	5	0	0	4	0	2.9411764705882355	1	0	0.4791238877481177	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006522	Chromosome_2A	3098	2	112	39.31568754034861	0.9438133785959872	0.9757539917208752	112	0	0.9090909090909091	17	0	0.9857239972807614	95	0	0.4450530640191715	34	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN006523	Chromosome_2A	954	1	36	40.77568134171908	0.9083311293308649	0.6428571428571429	36	0	0.6428571428571429	36	0	NA	NA	NA	1.6826923076923077	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006524	Chromosome_2A	282	1	6	40.780141843971634	0.5518590998043053	0	6	0	0	6	0	NA	NA	NA	3.7037037037037037	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006525	Chromosome_2A	954	1	37	40.041928721174	0.9685279187817258	0.38845726970033295	37	0	0.38845726970033295	37	0	NA	NA	NA	0.658544616397761	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006526	Chromosome_2A	4169	5	56	38.49844087311106	0.36368734577901846	38.39746132487108	53	0.4528301886792453	49.43946188340807	28	0.5	32.35113566605279	25	0.4	56.98689956331878	24	0.7916666666666666	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN006527	Chromosome_2A	936	1	34	42.52136752136752	0.8036972497916509	0.9846827133479212	34	0	0.9846827133479212	34	0	NA	NA	NA	0.3770739064856712	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006528	Chromosome_2A	44050	63	438	34.87627695800227	0.32727215733380943	67.93270543270543	438	0.771689497716895	66.00221483942414	182	0.7857142857142857	68.7925421722403	256	0.76171875	24.24015009380863	50	0.48	methylated (>=50%)	Q8WXX0	Dynein axonemal heavy chain 7 (Axonemal beta dynein heavy chain 7) (Ciliary dynein heavy chain 7) (Dynein heavy chain-like protein 2) (hDHC2)	cilium movement [GO:0003341]; cilium movement involved in cell motility [GO:0060294]; cilium-dependent cell motility [GO:0060285]; inner dynein arm assembly [GO:0036159]	hit with GO BP
GN016600	Chromosome_2A	180	1	25	58.888888888888886	1.6019935920256319	0.8113590263691683	25	0	0.8113590263691683	25	0	NA	NA	NA	0.759493670886076	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015847	Chromosome_2A	324	1	12	62.03703703703704	0.3943204868154158	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0803940260565619	81	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006529	Chromosome_2A	10426	10	163	35.977364281603684	0.4833015291598295	86.5080658302102	163	0.9938650306748467	91.08527131782945	16	1	86.2	147	0.9931972789115646	88.21243523316062	17	1	methylated (>=50%)	Q7TNH6	Nephrocystin-3	atrial septum development [GO:0003283]; cilium assembly [GO:0060271]; convergent extension [GO:0060026]; convergent extension involved in gastrulation [GO:0060027]; determination of intestine left/right asymmetry [GO:0071908]; determination of left/right symmetry [GO:0007368]; determination of liver left/right asymmetry [GO:0071910]; determination of pancreatic left/right asymmetry [GO:0035469]; determination of stomach left/right asymmetry [GO:0071909]; establishment or maintenance of cell polarity [GO:0007163]; extracellular matrix organization [GO:0030198]; heart looping [GO:0001947]; kidney development [GO:0001822]; kidney morphogenesis [GO:0060993]; lipid metabolic process [GO:0006629]; lung development [GO:0030324]; maintenance of animal organ identity [GO:0048496]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; non-motile cilium assembly [GO:1905515]; photoreceptor cell maintenance [GO:0045494]; regulation of Wnt signaling pathway, planar cell polarity pathway [GO:2000095]; ureter development [GO:0072189]	hit with GO BP
GN006530	Chromosome_2A	1423	2	23	40.12649332396346	0.4019774011299435	88.59198355601234	23	1	95.60669456066945	13	1	81.81818181818181	10	1	81.88764044943821	24	1	methylated (>=50%)	P54353	Putative peptidyl-prolyl cis-trans isomerase dodo (PPIase dodo) (EC 5.2.1.8) (Rotamase dodo)	positive regulation of protein ubiquitination [GO:0031398]; regulation of locomotor rhythm [GO:1904059]	hit with GO BP
GN006531	Chromosome_2A	39794	20	334	34.73387947931849	0.2788448595621124	70.66184489983354	334	0.8023952095808383	77.68456375838926	56	0.8928571428571429	69.54844716366297	278	0.7841726618705036	34.43223443223443	21	0.09523809523809523	methylated (>=50%)	Q96CN4	EVI5-like protein (Ecotropic viral integration site 5-like protein)	negative regulation of cilium assembly [GO:1902018]; positive regulation of GTPase activity [GO:0043547]	hit with GO BP
GN006532	Chromosome_2A	17120	5	242	36.48364485981308	0.4260832854684171	80.98037774674799	241	0.941908713692946	86.2876254180602	34	1	80.01563314226159	207	0.9323671497584541	84.93778650949574	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006533	Chromosome_2A	31463	16	352	33.88106664971554	0.3911140945323579	86.06747147345791	349	0.9570200573065902	85.60553633217994	21	1	86.09682099986809	328	0.9542682926829268	24.516129032258064	14	0.07142857142857142	methylated (>=50%)	Q8K389	CDK5 regulatory subunit-associated protein 2 (CDK5 activator-binding protein C48)	brain development [GO:0007420]; centriole replication [GO:0007099]; centrosome cycle [GO:0007098]; chromosome segregation [GO:0007059]; establishment of mitotic spindle orientation [GO:0000132]; microtubule bundle formation [GO:0001578]; microtubule cytoskeleton organization [GO:0000226]; microtubule organizing center organization [GO:0031023]; negative regulation of centriole replication [GO:0046600]; negative regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045736]; negative regulation of neuron differentiation [GO:0045665]; neurogenesis [GO:0022008]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of microtubule polymerization [GO:0031116]; regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090266]	hit with GO BP
GN006534	Chromosome_2A	42872	19	532	35.769266654226534	0.3902744191015971	62.063603717004185	528	0.6515151515151515	91.68787107718406	76	0.9342105263157895	57.59989775922297	452	0.6039823008849557	91.44050104384134	15	1	methylated (>=50%)	Q5VU43	Myomegalin (Cardiomyopathy-associated protein 2) (Phosphodiesterase 4D-interacting protein)	astral microtubule organization [GO:0030953]; centrosome cycle [GO:0007098]; positive regulation of microtubule nucleation [GO:0090063]; protein-containing complex assembly [GO:0065003]; regulation of Golgi organization [GO:1903358]	hit with GO BP
GN006535	Chromosome_2A	12459	9	156	36.696364074163256	0.3728198828677378	69.28688078388677	156	0.75	82.3915900131406	27	0.9629629629629629	66.68406629257471	129	0.7054263565891473	8.82669537136706	36	0.1111111111111111	methylated (>=50%)	Q17QS4	Phosphatidylinositol 4-phosphate 5-kinase-like protein 1 (PI(4)P 5-kinase-like protein 1) (PtdIns(4)P-5-kinase-like protein 1)	negative regulation of mitochondrial membrane potential [GO:0010917]; phosphatidylinositol metabolic process [GO:0046488]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; positive regulation of apoptotic process [GO:0043065]	hit with GO BP
GN006536	Chromosome_2A	9057	6	168	37.23087114938721	0.5359785126150324	68.90787065283709	167	0.8323353293413174	63.52357320099256	21	0.6666666666666666	69.83967935871743	146	0.8561643835616438	2.780269058295964	46	0.043478260869565216	methylated (>=50%)	Q8CAE2	Small RNA 2'-O-methyltransferase (EC 2.1.1.386) (HEN1 methyltransferase homolog 1) (mHEN1)	piRNA processing [GO:0034587]; RNA methylation [GO:0001510]	hit with GO BP
GN006537	Chromosome_2A	1131	1	60	45.269672855879755	1.0424763806743989	0.7078986587183308	60	0	0.7078986587183308	60	0	NA	NA	NA	0.5103668261562998	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006538	Chromosome_2A	13275	3	312	35.909604519774014	0.7304298139800648	1.3330541596873255	289	0	0.9564293304994687	29	0	1.3595279002016882	260	0	0.41899441340782123	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006539	Chromosome_2A	12805	6	345	38.508395158141354	0.7645982805333067	0.5701967874278562	340	0	0.7874015748031497	33	0	0.5468268638324091	307	0	0.36900369003690037	60	0	unmethylated (<10%)	A9JS51	Ciliary microtubule inner protein 2B	NA	hit, no GO BP
GN006540	Chromosome_2A	15707	8	441	35.589227732857964	0.886711703840705	0.5983777314835336	431	0	0.44321329639889195	89	0	0.6279352013086381	342	0	0.8388037928519329	80	0	unmethylated (<10%)	Q8I719	cGMP-dependent protein kinase (EC 2.7.11.12) (PfPKG)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; gamete generation [GO:0007276]; protein phosphorylation [GO:0006468]	hit with GO BP
GN006541	Chromosome_2A	318	1	11	43.081761006289305	0.7464788732394366	1.5060240963855422	11	0	1.5060240963855422	11	0	NA	NA	NA	0.4807692307692308	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006542	Chromosome_2A	1432	3	43	39.10614525139665	0.7964713947562443	9.883103081827842	43	0	9.581646423751687	32	0	11	11	0	7.501442585112522	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006543	Chromosome_2A	546	1	16	43.956043956043956	0.6150380174598704	10.547667342799189	16	0	10.547667342799189	16	0	NA	NA	NA	2.8947368421052633	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006544	Chromosome_2A	17874	8	213	35.20196934094215	0.386522070719869	74.68706536856746	213	0.9014084507042254	81.01160862354892	23	1	73.9947354089135	190	0.8894736842105263	85.13513513513513	40	0.975	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006545	Chromosome_2A	213	1	7	44.13145539906103	0.8643478260869565	44.34589800443459	7	0.14285714285714285	44.34589800443459	7	0.14285714285714285	NA	NA	NA	53.34656834940442	36	0.6388888888888888	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006546	Chromosome_2A	1272	1	12	39.937106918238996	0.24292193841012175	87.41721854304636	12	0.9166666666666666	87.41721854304636	12	0.9166666666666666	NA	NA	NA	92.03869047619048	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006547	Chromosome_2A	1531	2	17	37.49183540169824	0.3161186887396305	92.06510681586978	17	1	94.65737514518003	15	1	73.77049180327869	2	1	89.11788953009068	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006548	Chromosome_2A	882	1	11	37.414965986394556	0.36854700854700856	92.61285909712723	11	1	92.61285909712723	11	1	NA	NA	NA	86.26716604244695	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006549	Chromosome_2A	387	1	9	45.21963824289406	0.46034892942109434	0.6622516556291391	9	0	0.6622516556291391	9	0	NA	NA	NA	8.788449466415567	53	0.05660377358490566	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006550	Chromosome_2A	17073	20	159	33.15761729045862	0.339739167697504	71.93532582067614	159	0.8742138364779874	74.02479588751135	57	0.8596491228070176	70.93360394317193	102	0.8823529411764706	83.19783197831978	34	0.9411764705882353	methylated (>=50%)	E1B8W3	Outer dynein arm-docking complex subunit 2 (Armadillo repeat-containing protein 4)	cilium movement [GO:0003341]; outer dynein arm assembly [GO:0036158]	hit with GO BP
GN006551	Chromosome_2A	2226	4	9	40.20664869721473	0.1261237440507668	0	3	0	0	1	0	0	2	0	0.6872852233676976	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006552	Chromosome_2A	3004	9	88	39.081225033288945	0.7677665380046643	1.1820330969267139	88	0	1.1587848418415283	75	0	1.3029315960912051	13	0	0.7856341189674523	32	0	unmethylated (<10%)	P49870	Probable nuclear hormone receptor HR38 (bHR38) (Nuclear receptor subfamily 4 group A member 4)	cellular response to corticotropin-releasing hormone stimulus [GO:0071376]	hit with GO BP
GN006553	Chromosome_2A	20433	7	203	34.17510889247785	0.34104897312817273	68.821771275759	202	0.7524752475247525	78.06282722513089	42	0.9285714285714286	67.18807848944836	160	0.70625	46.92442882249561	41	0.6097560975609756	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006554	Chromosome_2A	843	1	31	42.11150652431791	0.8297771004000762	0.8379888268156425	31	0	0.8379888268156425	31	0	NA	NA	NA	0.9397693293464332	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006555	Chromosome_2A	1756	2	28	36.674259681093396	0.4745808519058328	82.3529411764706	28	1	82.5	25	1	81.87311178247734	3	1	18.282548476454295	16	0	methylated (>=50%)	Q99612	Krueppel-like factor 6 (B-cell-derived protein 1) (Core promoter element-binding protein) (GC-rich sites-binding factor GBF) (Proto-oncogene BCD1) (Suppressor of tumorigenicity 12 protein) (Transcription factor Zf9)	B cell differentiation [GO:0030183]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017959	Chromosome_2A	1350	4	38	40.22222222222222	0.6963485815121487	1.9281332164767748	38	0	2.1847070506454815	35	0	0	3	0	0.9242560865644724	70	0	unmethylated (<10%)	Q3T0G1	THAP domain-containing protein 1	DNA-templated transcription [GO:0006351]; endothelial cell proliferation [GO:0001935]; regulation of DNA-templated transcription [GO:0006355]; regulation of mitotic cell cycle [GO:0007346]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006556	Chromosome_2A	333	1	15	42.64264264264264	1.0006009615384615	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1099549080818591	55	0	NA	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN006557	Chromosome_2A	570	2	11	45.08771929824562	0.40566770186335405	2	5	0	2.247191011235955	4	0	0	1	0	1.932367149758454	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006558	Chromosome_2A	1795	2	31	39.05292479108635	0.46037064614875484	0.3448275862068966	9	0	0	4	0	0.4291845493562232	5	0	0.8264462809917356	21	0	unmethylated (<10%)	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN006559	Chromosome_2A	718	2	3	36.35097493036211	0.12701969571883476	0	2	0	0	2	0	NA	NA	NA	2.5813692480359145	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006560	Chromosome_2A	216	1	10	43.98148148148148	1.128526645768025	0	1	0	0	1	0	NA	NA	NA	0.794585050029429	66	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006561	Chromosome_2A	8221	22	221	37.538012407249724	0.7640077542850414	1.0541276797346915	217	0	1.1202068074105989	128	0	0.9734280452512497	89	0	1.5618742490989188	52	0	unmethylated (<10%)	Q6U841	Sodium-driven chloride bicarbonate exchanger (Solute carrier family 4 member 10)	bicarbonate transport [GO:0015701]; chloride transport [GO:0006821]; regulation of intracellular pH [GO:0051453]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; visual perception [GO:0007601]	hit with GO BP
GN006562	Chromosome_2A	2381	3	19	35.61528769424611	0.2545077102238525	0.4219409282700422	19	0	0.34965034965034963	13	0	0.6116207951070336	6	0	0.6626506024096386	78	0	unmethylated (<10%)	Q9UUA2	ATP-dependent DNA helicase pfh1 (EC 5.6.2.3) (DNA 5'-3' helicase pfh1) (DNA repair and recombination helicase pfh1) (PIF1 helicase homolog) (RRM3/PIF1 homolog 1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA strand elongation involved in mitotic DNA replication [GO:1902983]; mitochondrial DNA repair [GO:0043504]; mitotic recombination-dependent replication fork processing [GO:1990426]; removal of RNA primer involved in mitotic DNA replication [GO:1903469]; replication fork processing [GO:0031297]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN006563	Chromosome_2A	1035	1	8	36.231884057971016	0.2364093193238922	0.796812749003984	8	0	0.796812749003984	8	0	NA	NA	NA	0.9345794392523364	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006564	Chromosome_2A	1029	1	45	42.371234207968904	0.9818077730424273	0.32175032175032175	45	0	0.32175032175032175	45	0	NA	NA	NA	0.6382130035899481	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002579	Chromosome_2A	1245	1	32	44.57831325301205	0.5280598043633857	11.350455675227838	32	0	11.350455675227838	32	0	NA	NA	NA	7.072368421052632	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006565	Chromosome_2A	13605	7	195	33.52443954428519	0.5103150787696924	75.18157661647476	191	0.9109947643979057	68	14	0.9285714285714286	75.69259962049335	177	0.9096045197740112	51.43253234750462	37	0.6756756756756757	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006566	Chromosome_2A	345	1	0	46.666666666666664	0	NA	0	NA	NA	NA	NA	NA	NA	NA	79.262960649594	37	0.9459459459459459	NA	NA	NA	NA	no Swiss-Prot hit
GN006567	Chromosome_2A	624	2	21	41.02564102564103	0.8002442748091603	1.2332990750256938	21	0	1.2332990750256938	21	0	NA	NA	NA	1.8921208698107879	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006568	Chromosome_2A	663	4	12	35.444947209653094	0.5792922673656619	1.0335917312661498	12	0	0.9957325746799431	11	0	1.408450704225352	1	0	0.5096468875136513	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006569	Chromosome_2A	45801	18	694	34.5494639855025	0.50799573343531	76.55021519078647	633	0.8309636650868878	79.88267770876466	63	0.8571428571428571	76.3006228516786	570	0.8280701754385965	0.5596362364463099	53	0	methylated (>=50%)	Q9Y426	C2 domain-containing protein 2 (Transmembrane protein 24-like)	NA	hit, no GO BP
GN006570	Chromosome_2A	4783	8	143	38.19778381768764	0.8203231068147473	0.5028494803888702	143	0	0.6417736289381564	47	0	0.4468485418626529	96	0	0.5612065941774815	47	0	unmethylated (<10%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN006571	Chromosome_2A	1044	1	46	40.32567049808429	1.090512738998138	0.7905138339920948	46	0	0.7905138339920948	46	0	NA	NA	NA	1.0138740661686232	35	0	unmethylated (<10%)	Q0GC71	Toll-like receptor 2 (CD antigen CD282)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to triacyl bacterial lipopeptide [GO:0071727]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN006572	Chromosome_2A	18009	10	206	34.24398911655283	0.39018401423649235	87.20196353436185	206	0.9271844660194175	93.64566505115778	35	1	86.2372006772555	171	0.9122807017543859	0.58167716917111	41	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006573	Chromosome_2A	28321	14	298	34.483245648105644	0.35883009505811414	85.59160305343511	282	0.9609929078014184	70.66139061616732	34	0.7352941176470589	87.04734608388911	248	0.9919354838709677	56.95739014647137	40	0.65	methylated (>=50%)	Q92759	General transcription factor IIH subunit 4 (Basic transcription factor 2 52 kDa subunit) (BTF2 p52) (General transcription factor IIH polypeptide 4) (TFIIH basal transcription factor complex p52 subunit)	DNA repair [GO:0006281]; nucleotide-excision repair [GO:0006289]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN006574	Chromosome_2A	846	1	55	48.10874704491726	1.1260345578626398	0.5555555555555556	55	0	0.5555555555555556	55	0	NA	NA	NA	1.407035175879397	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006575	Chromosome_2A	666	1	11	41.291291291291294	0.4186285714285714	92.25	11	1	92.25	11	1	NA	NA	NA	91.3601368691189	39	0.9743589743589743	methylated (>=50%)	O14530	Thioredoxin domain-containing protein 9 (ATP-binding protein associated with cell differentiation) (Protein 1-4)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN006576	Chromosome_2A	14013	7	188	35.78106044387354	0.4195460206937969	85.60752169720347	187	0.946524064171123	80.31914893617021	20	0.9	85.94765651727677	167	0.9520958083832335	41.64485981308411	45	0.3333333333333333	methylated (>=50%)	Q08890	Iduronate 2-sulfatase (EC 3.1.6.13) (Alpha-L-iduronate sulfate sulfatase)	dermatan sulfate proteoglycan catabolic process [GO:0030209]; glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]	hit with GO BP
GN006577	Chromosome_2A	714	1	35	52.661064425770306	0.7072307910004245	2.255639097744361	19	0	2.255639097744361	19	0	NA	NA	NA	1.093210586881473	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006578	Chromosome_2A	450	1	14	42.888888888888886	0.7756710169908889	66.84350132625995	14	1	66.84350132625995	14	1	NA	NA	NA	66.0060975609756	54	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006579	Chromosome_2A	3144	6	55	40.458015267175576	0.4390091574487099	75.33530042918454	37	1	75.54579156940821	36	1	66.47398843930635	1	1	57.91397244869272	15	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006580	Chromosome_2A	6074	6	61	34.57359236088245	0.3363236718440098	89.96990972918756	61	0.9836065573770492	92.19143576826197	14	1	89.41765810895429	47	0.9787234042553191	86.39618138424821	31	1	methylated (>=50%)	Q921S7	Large ribosomal subunit protein mL37 (39S ribosomal protein L37, mitochondrial) (L37mt) (MRP-L37)	mitochondrial translation [GO:0032543]	hit with GO BP
GN006581	Chromosome_2A	22352	14	263	36.90497494631353	0.34909051176120226	92.52220934723832	251	0.9960159362549801	93.83638401195368	57	1	92.17958706661473	194	0.9948453608247423	94.12429378531074	13	1	methylated (>=50%)	Q6P4S6	Serine/threonine-protein kinase SIK3 (EC 2.7.11.1) (Salt-inducible kinase 3) (SIK-3) (Serine/threonine-protein kinase QSK)	cartilage development involved in endochondral bone morphogenesis [GO:0060351]; endochondral ossification [GO:0001958]; intracellular signal transduction [GO:0035556]; limb morphogenesis [GO:0035108]; microtubule cytoskeleton organization [GO:0000226]; multicellular organism growth [GO:0035264]; positive regulation of TORC1 signaling [GO:1904263]; positive regulation of TORC2 signaling [GO:1904515]; protein phosphorylation [GO:0006468]; regulation of protein localization [GO:0032880]; skeletal system morphogenesis [GO:0048705]	hit with GO BP
GN006582	Chromosome_2A	666	1	0	40.84084084084084	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4384042086804033	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006583	Chromosome_2A	5050	3	133	35.227722772277225	0.8490849881420127	1.4017381553125876	97	0	0.8646998982706002	72	0	2.061211742660837	25	0	0.28653295128939826	50	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN006584	Chromosome_2A	5055	3	135	35.27200791295747	0.8588110483554321	1.3215859030837005	95	0	1.248266296809986	70	0	1.4040561622464898	25	0	0.4681647940074906	45	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN006585	Chromosome_2A	613	2	17	39.80424143556281	0.717551470081939	0.48465266558966075	17	0	0.390625	14	0	0.9345794392523364	3	0	0.3261312678353037	32	0	unmethylated (<10%)	A0A1V6PAF7	Highly reducing polyketide synthase calA (HR-PKS calA) (EC 2.3.1.-) (Calbistrin biosynthesis cluster protein A)	fatty acid biosynthetic process [GO:0006633]; lactone biosynthetic process [GO:1901336]; polyketide biosynthetic process [GO:0030639]	hit with GO BP
GN006586	Chromosome_2A	4348	3	138	38.75344986200552	0.8485054174903911	0.6290584415584416	124	0	0.6121313299944352	90	0	0.6746626686656672	34	0	0.7490636704119851	47	0	unmethylated (<10%)	Q869W9	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)	fatty acid biosynthetic process [GO:0006633]; mating [GO:0007618]	hit with GO BP
GN006587	Chromosome_2A	762	1	22	40.15748031496063	0.7230848861283644	0.5128205128205128	22	0	0.5128205128205128	22	0	NA	NA	NA	0.5561348627042058	66	0	unmethylated (<10%)	P9WEZ4	Hybrid PKS-NRPS synthetase pytA (EC 2.3.1.-) (EC 6.3.2.-) (Pyranterreones biosynthesis cluster protein A)	fatty acid biosynthetic process [GO:0006633]; lactone biosynthetic process [GO:1901336]; secondary metabolite biosynthetic process [GO:0044550]	hit with GO BP
GN006588	Chromosome_2A	705	1	25	43.829787234042556	0.7411690496215307	2.450980392156863	11	0	2.450980392156863	11	0	NA	NA	NA	1.4150943396226414	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006589	Chromosome_2A	558	1	8	45.878136200716845	0.3341567482596003	0.6024096385542169	8	0	0.6024096385542169	8	0	NA	NA	NA	0.6194081211286993	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006590	Chromosome_2A	14403	6	462	36.950635284315766	0.9397378523847829	0.7040836853751761	432	0	0.6695853721349472	74	0	0.7124554715330292	358	0	1.17011701170117	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006591	Chromosome_2A	18505	10	493	36.81707646582005	0.7864149083391677	0.6255707762557078	492	0	0.4022121669180493	46	0	0.6478830797046858	446	0	0.547392682224143	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006592	Chromosome_2A	31298	32	534	36.67326985749888	0.5082930830108766	89.28865051090318	498	0.9879518072289156	92.93785310734464	131	1	88.07573939804914	367	0.9836512261580381	89.97747747747748	30	1	methylated (>=50%)	Q3UGF1	WD repeat-containing protein 19 (Intraflagellar transport 144 homolog)	cell morphogenesis [GO:0000902]; cilium assembly [GO:0060271]; digestive system development [GO:0055123]; ear morphogenesis [GO:0042471]; embryonic camera-type eye development [GO:0031076]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic limb morphogenesis [GO:0030326]; gonad development [GO:0008406]; in utero embryonic development [GO:0001701]; intraciliary anterograde transport [GO:0035720]; intraciliary retrograde transport [GO:0035721]; myotome development [GO:0061055]; nervous system process [GO:0050877]; protein localization to ciliary membrane [GO:1903441]; protein localization to cilium [GO:0061512]; protein localization to non-motile cilium [GO:0097499]; protein-containing complex assembly [GO:0065003]; receptor clustering [GO:0043113]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN006593	Chromosome_2A	1092	1	62	47.71062271062271	1.0012422360248447	0.9154929577464789	62	0	0.9154929577464789	62	0	NA	NA	NA	3.0405405405405403	40	0.025	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006594	Chromosome_2A	1152	1	66	47.135416666666664	1.0318938139572758	0.4655493482309125	60	0	0.4655493482309125	60	0	NA	NA	NA	2.2417153996101367	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006595	Chromosome_2A	3009	2	126	39.747424393486206	1.0617769376181474	0.7997585634525426	126	0	0.8302730320932461	119	0	0.27472527472527475	7	0	0.696560731388768	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006596	Chromosome_2A	888	1	32	41.554054054054056	0.8365520489872822	0.5065123010130246	32	0	0.5065123010130246	32	0	NA	NA	NA	0.7374971191518783	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006597	Chromosome_2A	5472	1	185	40.2046783625731	0.8472211644604313	0.5138607167004733	184	0	0.5138607167004733	184	0	NA	NA	NA	0.5050505050505051	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006598	Chromosome_2A	1917	5	77	40.63641105894627	0.985255443271169	0.5677210056772101	77	0	0.7132667617689016	49	0	0.37593984962406013	28	0	0.5535983895319577	52	0	unmethylated (<10%)	P91778	Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN006599	Chromosome_2A	1056	1	36	41.85606060606061	0.7806641066184775	2.534854245880862	35	0	2.534854245880862	35	0	NA	NA	NA	0.6839945280437757	47	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN006600	Chromosome_2A	20926	7	265	35.99827965210743	0.4107159019049804	0.6641273561871277	249	0	0.6741573033707865	101	0	0.6605892456070815	148	0	0.7446808510638298	36	0	unmethylated (<10%)	P91778	Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN006601	Chromosome_2A	6997	6	163	34.40045733885951	0.789039615563959	1.1389521640091116	162	0	0.7858546168958742	24	0	1.1805555555555556	138	0	0.6074924063449207	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006602	Chromosome_2A	18856	13	564	38.22655918540518	0.8273439339754461	0.9721502848719072	507	0	0.5326604990187833	81	0	1.044956344046071	426	0	0.6278026905829597	38	0	unmethylated (<10%)	Q0VAA2	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN006603	Chromosome_2A	3338	2	109	39.18514080287597	0.8535442158997072	0.5453306066803	96	0	0.4843517138599106	92	0	1.2	4	0	0.16260162601626016	38	0	unmethylated (<10%)	Q8J0F5	Compactin diketide synthase mlcB (EC 2.3.1.244) (Compactin biosynthesis protein B)	fatty acid biosynthetic process [GO:0006633]; mevastatin biosynthetic process [GO:0140877]	hit with GO BP
GN006604	Chromosome_2A	3756	1	114	38.71139510117146	0.8126028364352693	0.37593984962406013	71	0	0.37593984962406013	71	0	NA	NA	NA	0.8992805755395683	41	0	unmethylated (<10%)	B0XZV6	Highly reducing polyketide synthase sphB (HR-PKS sphB) (EC 2.3.1.-) (Sphingofungin biosynthesis cluster protein B)	fatty acid biosynthetic process [GO:0006633]; lactone biosynthetic process [GO:1901336]; secondary metabolite biosynthetic process [GO:0044550]	hit with GO BP
GN006605	Chromosome_2A	2076	1	46	37.47591522157996	0.631086439333862	1.5969938938468764	46	0	1.5969938938468764	46	0	NA	NA	NA	1.4066496163682864	50	0	unmethylated (<10%)	A0A0C1E3C9	Highly reducing polyketide synthase stmA (HR-PKS stmA) (EC 1.-.-.-) (EC 2.3.1.-) (Stromemycin biosynthesis cluster protein A)	fatty acid biosynthetic process [GO:0006633]; lactone biosynthetic process [GO:1901336]; secondary metabolite biosynthetic process [GO:0044550]	hit with GO BP
GN006606	Chromosome_2A	4553	2	115	37.66747199648584	0.7131018045624787	1.4520082971902697	115	0	1.4098296455844919	112	0	2.5510204081632653	3	0	1.6864459712679576	56	0	unmethylated (<10%)	Q869W9	Probable polyketide synthase 16 (dipks16) (EC 2.3.1.-)	fatty acid biosynthetic process [GO:0006633]; mating [GO:0007618]	hit with GO BP
GN006607	Chromosome_2A	1305	2	24	36.24521072796935	0.5630460575989645	91.41315014720314	24	1	91.74406604747162	22	1	85	2	1	61.78588574171867	61	0.6229508196721312	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006608	Chromosome_2A	1868	5	31	36.45610278372591	0.5055965914051722	84.45917944467467	31	1	84.67852257181943	27	1	82.27272727272727	4	1	89.60988798764002	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006609	Chromosome_2A	6972	3	109	36.015490533562826	0.48212096989075404	NA	0	NA	NA	NA	NA	NA	NA	NA	3.374777975133215	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006610	Chromosome_2A	457	2	10	41.57549234135667	0.5109570661896243	53.431372549019606	10	0.8	53.23475046210721	9	0.7777777777777778	54.929577464788736	1	1	71.3	23	0.9130434782608695	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006611	Chromosome_2A	7379	9	124	36.10245290689795	0.5157304099088309	89.1025641025641	8	1	92.63157894736842	3	1	83.60655737704919	5	1	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006612	Chromosome_2A	11744	3	196	34.289850136239785	0.5685228636774534	2.9707295762341634	177	0	1.6167059616032333	88	0	3.620494585421044	89	0	2.740740740740741	46	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN006613	Chromosome_2A	4696	4	45	32.43185689948893	0.3651683451646126	6.730769230769231	11	0	1.7543859649122806	2	0	7.520891364902507	9	0	2.3046875	56	0	unmethylated (<10%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN006614	Chromosome_2A	2925	3	27	35.24786324786325	0.29721135029354206	13.82716049382716	9	0	6.0606060606060606	6	0	17.582417582417584	3	0	2.9411764705882355	2	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006615	Chromosome_2A	7379	9	124	36.04824501965036	0.5172870746637902	1.2224938875305624	18	0	1.5151515151515151	12	0	0.6896551724137931	6	0	3.1963470319634704	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006616	Chromosome_2A	2373	5	15	32.36409608091024	0.2436561774832805	2.735781137508999	15	0	5.314009661835748	4	0	1.641025641025641	11	0	4.703974047039741	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006617	Chromosome_2A	1237	2	19	39.531123686337914	0.3936323440744959	0.8136696501220505	19	0	0.8136696501220505	19	0	NA	NA	NA	0.5719733079122974	12	0	unmethylated (<10%)	Q9BX70	BTB/POZ domain-containing protein 2	neurogenesis [GO:0022008]	hit with GO BP
GN006618	Chromosome_2A	1218	1	44	40.06568144499179	0.9016757520694528	0.5676442762535477	42	0	0.5676442762535477	42	0	NA	NA	NA	0.6417970316887285	40	0	unmethylated (<10%)	Q3KNS1	Patched domain-containing protein 3 (Patched-related protein)	NA	hit, no GO BP
GN006619	Chromosome_2A	720	1	21	38.47222222222222	0.7882389740381608	0.8447729672650475	21	0	0.8447729672650475	21	0	NA	NA	NA	0.5235602094240838	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006620	Chromosome_2A	697	2	20	45.33715925394548	0.5657467532467533	0.8733624454148472	20	0	0.9615384615384616	17	0	0	3	0	0.6255585344057194	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006621	Chromosome_2A	1499	2	28	36.424282855236825	0.5636473511045458	2.0191285866099893	28	0	2.0994475138121547	26	0	0	2	0	5.4733727810650885	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006622	Chromosome_2A	963	1	31	38.940809968847354	0.8494479854313681	0.9242144177449169	25	0	0.9242144177449169	25	0	NA	NA	NA	2.2900763358778624	55	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN006623	Chromosome_2A	549	1	17	45.537340619307834	0.6048998638926697	1.6129032258064515	11	0	1.6129032258064515	11	0	NA	NA	NA	0.3076923076923077	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006624	Chromosome_2A	963	1	31	38.940809968847354	0.8496413934426229	1.6845329249617151	29	0	1.6845329249617151	29	0	NA	NA	NA	2.852962692026335	38	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN006625	Chromosome_2A	549	1	17	45.537340619307834	0.6048998638926697	0.35587188612099646	9	0	0.35587188612099646	9	0	NA	NA	NA	0.9389671361502347	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006626	Chromosome_2A	378	2	14	37.56613756613756	1.075609756097561	0.4048582995951417	14	0	0.44052863436123346	13	0	0	1	0	0.8413836086008102	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006627	Chromosome_2A	8406	7	275	35.379490839876276	1.0466258185359598	0.9801933346853241	274	0	0.449582530507386	33	0	1.042611060743427	241	0	0.38204393505253104	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006628	Chromosome_2A	5172	7	147	35.34416086620263	0.9112760650456008	1.3570313438213042	147	0	0.6632277081798084	29	0	1.4921090387374463	118	0	0.5326704545454546	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006629	Chromosome_2A	252	1	0	38.095238095238095	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9046849757673667	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006630	Chromosome_2A	20842	10	265	36.74311486421649	0.38064510348782077	66.3869992441421	263	0.688212927756654	87.1145038167939	88	0.9204545454545454	59.568056253139126	175	0.5714285714285714	16.39871382636656	23	0.043478260869565216	methylated (>=50%)	Q13627	Dual specificity tyrosine-phosphorylation-regulated kinase 1A (EC 2.7.11.23) (EC 2.7.12.1) (Dual specificity YAK1-related kinase) (HP86) (Protein kinase minibrain homolog) (MNBH) (hMNB)	circadian rhythm [GO:0007623]; negative regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043518]; negative regulation of heterochromatin formation [GO:0031452]; negative regulation of microtubule polymerization [GO:0031115]; nervous system development [GO:0007399]; peptidyl-tyrosine phosphorylation [GO:0018108]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of RNA splicing [GO:0033120]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of amyloid-beta formation [GO:1902003]; regulation of neurofibrillary tangle assembly [GO:1902996]	hit with GO BP
GN006631	Chromosome_2A	6275	3	109	34.29482071713147	0.5916677335529389	85.9354686207304	109	0.8990825688073395	79.48717948717949	7	0.8571428571428571	86.18235366302613	102	0.9019607843137255	28.350934199837532	22	0.2727272727272727	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006632	Chromosome_2A	2364	2	92	38.917089678511	1.029402298415343	0.4721669980119284	92	0	0.5056398288603656	72	0	0.41293874741913283	20	0	0.7497322384862549	57	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN006633	Chromosome_2A	972	1	35	41.25514403292181	0.846521349656614	0.39123630672926446	35	0	0.39123630672926446	35	0	NA	NA	NA	0.6896551724137931	55	0	unmethylated (<10%)	Q23157	Innexin-11 (Protein opu-11)	NA	hit, no GO BP
GN006634	Chromosome_2A	291	1	17	45.017182130584196	1.231209556993529	0.46701692936368944	17	0	0.46701692936368944	17	0	NA	NA	NA	0.5788376939106274	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006635	Chromosome_2A	2001	5	38	33.83308345827086	0.6640293424155096	1.358695652173913	38	0	0.45454545454545453	8	0	1.583710407239819	30	0	0.8775276611980161	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006636	Chromosome_2A	249	1	8	41.76706827309237	0.7377777777777778	0	8	0	0	8	0	NA	NA	NA	0.948642459928034	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006637	Chromosome_2A	243	1	6	46.09053497942387	0.4673076923076923	0	6	0	0	6	0	NA	NA	NA	0.7836990595611285	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006638	Chromosome_2A	526	2	16	36.88212927756654	0.9301503094606542	0.6430868167202572	16	0	0.5787037037037037	15	0	1.4492753623188406	1	0	0.8193801211257571	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006639	Chromosome_2A	609	1	7	39.40886699507389	0.29606222654350994	0.3976143141153082	7	0	0.3976143141153082	7	0	NA	NA	NA	1.078582434514638	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006640	Chromosome_2A	384	1	10	44.270833333333336	0.542296285835334	0	10	0	0	10	0	NA	NA	NA	1.1220196353436185	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006641	Chromosome_2A	1149	2	31	42.64577893820714	0.5977947099892589	0	7	0	0	6	0	0	1	0	0.8168028004667445	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006642	Chromosome_2A	1409	2	30	36.834634492547906	0.6277660617221612	0.8168028004667445	27	0	1.2244897959183674	11	0	0.6535947712418301	16	0	0.47723935389133626	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006643	Chromosome_2A	2839	3	66	36.03381472349419	0.7179575602915144	0.865533230293663	66	0	0.8012820512820513	15	0	0.8808885484488702	51	0	0.4396482813749001	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006644	Chromosome_2A	317	2	4	31.545741324921135	0.5503472222222222	0.6600660066006601	4	0	0.6600660066006601	4	0	NA	NA	NA	3.790710090763481	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006645	Chromosome_2A	2718	1	109	41.94260485651214	0.9122602815652366	0.38699690402476783	109	0	0.38699690402476783	109	0	NA	NA	NA	0.24169184290030213	44	0	unmethylated (<10%)	Q9JIP0	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Calcium transporter 2) (CaT2) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)	calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; calcium ion transport into cytosol [GO:0060402]; protein homotetramerization [GO:0051289]; regulation of urine volume [GO:0035809]	hit with GO BP
GN006646	Chromosome_2A	343	2	6	32.06997084548105	0.7521929824561403	1.1904761904761905	6	0	1.5384615384615385	5	0	0	1	0	0.6764822920811778	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006647	Chromosome_2A	2718	1	109	41.574687270051506	0.9286365816273756	0.5216095380029806	109	0	0.5216095380029806	109	0	NA	NA	NA	1.6936104695919938	26	0	unmethylated (<10%)	Q9JIP0	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Calcium transporter 2) (CaT2) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)	calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; calcium ion transport into cytosol [GO:0060402]; protein homotetramerization [GO:0051289]; regulation of urine volume [GO:0035809]	hit with GO BP
GN006648	Chromosome_2A	909	3	19	39.273927392739274	0.5432840515885499	0.7648183556405354	19	0	0.7648183556405354	19	0	NA	NA	NA	0.5098980203959208	56	0	unmethylated (<10%)	Q9XZC0	Alpha-latrocrustotoxin-Lt1a (Alpha-LCT-Lt1a) (Alpha-latrocrustotoxin) (Alpha-LCT) (Crusta1)	NA	hit, no GO BP
GN006649	Chromosome_2A	573	1	9	47.818499127399654	0.3003669404158658	0	4	0	0	4	0	NA	NA	NA	0	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006650	Chromosome_2A	1574	2	32	46.56925031766201	0.3854831550106381	1.6528925619834711	10	0	2.0408163265306123	8	0	0	2	0	0.23529411764705882	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006651	Chromosome_2A	11373	3	320	37.57144113250681	0.7973271697575831	1.3038295336015497	319	0	0.8955223880597015	41	0	1.3491143850355902	278	0	0.4786597526924611	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006652	Chromosome_2A	390	1	24	39.48717948717949	1.5918367346938775	0.3395585738539898	24	0	0.3395585738539898	24	0	NA	NA	NA	0.6476683937823834	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006653	Chromosome_2A	1073	3	34	39.60857409133271	0.8084474582280725	0.6578947368421053	34	0	0.8686210640608035	27	0	0	7	0	0.3473227206946454	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006654	Chromosome_2A	28097	34	382	35.71555682101292	0.4319363424089813	81.36643557070374	343	0.924198250728863	93.5568704799474	102	0.9803921568627451	77.6083101089435	241	0.9004149377593361	86.67782827074862	39	1	methylated (>=50%)	Q9UPV0	Centrosomal protein of 164 kDa (Cep164)	cilium assembly [GO:0060271]	hit with GO BP
GN006655	Chromosome_2A	288	1	13	43.40277777777778	0.9724675324675325	0.7177033492822966	13	0	0.7177033492822966	13	0	NA	NA	NA	25.095785440613028	46	0.1956521739130435	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006656	Chromosome_2A	14626	7	253	36.05223574456448	0.5336093398052092	87.46868628022138	249	0.9518072289156626	85.7866184448463	59	0.9491525423728814	87.79166666666667	190	0.9526315789473684	55.908419497784344	31	0.6774193548387096	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006657	Chromosome_2A	26940	17	365	35.645879732739424	0.42931341201976264	82.10169491525424	362	0.9668508287292817	85.67876678269518	42	1	81.7440588644725	320	0.9625	55.935534591194966	38	0.4473684210526316	methylated (>=50%)	Q460N3	Protein mono-ADP-ribosyltransferase PARP15 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3) (Poly [ADP-ribose] polymerase 15) (PARP-15)	negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein poly-ADP-ribosylation [GO:0070212]	hit with GO BP
GN006658	Chromosome_2A	261	1	12	54.78927203065134	0.615082482325216	0.8695652173913043	8	0	0.8695652173913043	8	0	NA	NA	NA	13.771626297577855	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006659	Chromosome_2A	5962	6	163	35.189533713518955	0.8850692167577413	52.71474506201194	161	0.4968944099378882	62.096774193548384	16	0.625	52.02642737402623	145	0.4827586206896552	21.78649237472767	43	0.046511627906976744	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006660	Chromosome_2A	2884	2	79	35.64493758668516	0.86476105166871	24.85941893158388	79	0.20253164556962025	26.865671641791046	22	0.45454545454545453	24.44066836590201	57	0.10526315789473684	57.44888023369036	30	0.7333333333333333	sparse (10-50%)	P07439	Lectin BRA-3	NA	hit, no GO BP
GN006661	Chromosome_2A	1800	3	63	41.77777777777778	0.802934179222839	0.5670103092783505	62	0	0.5497861942577886	51	0	0.6600660066006601	11	0	1.5032211882605584	50	0	unmethylated (<10%)	Q5SPF7	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN006662	Chromosome_2A	1221	1	23	37.75593775593776	0.5291291404454158	1.908023483365949	22	0	1.908023483365949	22	0	NA	NA	NA	12.048192771084338	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006663	Chromosome_2A	8415	7	220	35.21093285799168	0.8436897584184406	0.8692469576356483	216	0	0.12269938650306748	48	0	1.000107538444994	168	0	0.6583278472679395	59	0	unmethylated (<10%)	P07439	Lectin BRA-3	NA	hit, no GO BP
GN006664	Chromosome_2A	42990	17	936	36.83414747615725	0.6422334544520588	92.79993139524912	918	0.9836601307189542	94.70899470899471	79	0.9873417721518988	92.67463537668604	839	0.9833134684147795	0.6524575902566333	51	0	methylated (>=50%)	P07742	Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase subunit M1) (Ribonucleotide reductase large subunit)	2'-deoxyribonucleotide biosynthetic process [GO:0009265]; deoxyribonucleotide biosynthetic process [GO:0009263]; DNA repair [GO:0006281]; DNA synthesis involved in DNA repair [GO:0000731]; dTMP biosynthetic process [GO:0006231]; mitochondrial DNA replication [GO:0006264]; positive regulation of G0 to G1 transition [GO:0070318]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; protein heterotetramerization [GO:0051290]; ribonucleoside diphosphate metabolic process [GO:0009185]	hit with GO BP
GN006665	Chromosome_2A	12976	7	150	34.2324290998767	0.39724743286193875	85.69982795263637	150	0.9333333333333333	83.68794326241135	26	0.9230769230769231	85.95909973723295	124	0.9354838709677419	49.755817293881066	60	0.5833333333333334	methylated (>=50%)	Q9HC07	Putative divalent cation/proton antiporter TMEM165 (Transmembrane protein 165) (Transmembrane protein PT27) (Transmembrane protein TPARL)	calcium ion transport [GO:0006816]; Golgi calcium ion homeostasis [GO:0032468]; Golgi calcium ion transport [GO:0032472]; manganese ion transport [GO:0006828]	hit with GO BP
GN006666	Chromosome_2A	2633	2	82	36.68818837827573	0.9258087201125176	0.5491990846681922	81	0	0.8880994671403197	21	0	0.4990806409246126	60	0	0.6528835690968444	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006667	Chromosome_2A	8122	5	206	37.72469835016006	0.7128765687479628	1.1527377521613833	204	0	0.9758897818599311	39	0	1.1913719588663154	165	0	0.6594724220623501	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006668	Chromosome_2A	954	1	39	42.9769392033543	0.9119117647058823	0.5055611729019212	39	0	0.5055611729019212	39	0	NA	NA	NA	0.9452253999030538	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006669	Chromosome_2A	3199	7	115	40.668959049703034	0.869482496194825	0.801554529997571	113	0	0.6541291905151267	63	0	1.0173548773189707	50	0	0.9604302727621975	60	0	unmethylated (<10%)	Q04799	Flavin-containing monooxygenase 5 (FMO 5) (Dimethylaniline monooxygenase [N-oxide-forming] 5) (EC 1.14.13.8) (Dimethylaniline oxidase 5) (FMO 1C1) (FMO form 3) (Hepatic flavin-containing monooxygenase 5) (NADPH oxidase) (EC 1.6.3.1)	regulation of cholesterol metabolic process [GO:0090181]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN006670	Chromosome_2A	1189	2	28	39.613120269133724	0.600310144613942	0.5793742757821553	28	0	0.5793742757821553	28	0	NA	NA	NA	0.858085808580858	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006671	Chromosome_2A	8394	11	244	34.572313557302834	0.9750057125447482	0.7306302689682859	244	0	0.5958640028040659	49	0	0.7706727765048949	195	0	4.577564283695959	73	0	unmethylated (<10%)	Q6W3E9	Prolyl 4-hydroxylase subunit alpha-3 (4-PH alpha-3) (EC 1.14.11.2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3)	NA	hit, no GO BP
GN006672	Chromosome_2A	807	1	21	47.58364312267658	0.47044943508314135	83.03571428571429	6	1	83.03571428571429	6	1	NA	NA	NA	92.95774647887323	39	0.9743589743589743	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006673	Chromosome_2A	878	2	22	41.34396355353075	0.5925153374233129	78.64077669902913	22	1	79.58993476234856	19	1	74.81203007518798	3	1	88.68924889543446	58	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006674	Chromosome_2A	20759	15	409	36.47574545980057	0.600483898972475	80.0186741363212	396	0.9368686868686869	85.6594461200987	79	0.9746835443037974	79.03840655675212	317	0.9274447949526814	84.25302826379543	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006675	Chromosome_2A	36827	18	565	34.28734352513102	0.5238380263428866	83.55479609273381	561	0.966131907308378	93.66666666666667	96	0.9895833333333334	82.24379843844537	465	0.9612903225806452	1.6738995660260385	38	0	methylated (>=50%)	Q9UPV9	Trafficking kinesin-binding protein 1 (106 kDa O-GlcNAc transferase-interacting protein) (Protein Milton)	axonal transport of mitochondrion [GO:0019896]; dendrite morphogenesis [GO:0048813]; endosome to lysosome transport [GO:0008333]; mitochondrion distribution [GO:0048311]; neurogenesis [GO:0022008]; positive regulation of axonogenesis [GO:0050772]; protein O-linked glycosylation [GO:0006493]; protein targeting [GO:0006605]; regulation of transcription by RNA polymerase II [GO:0006357]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN006676	Chromosome_2A	6017	5	154	35.46617915904936	0.8185027855583793	90.57719054242003	154	1	93.61833952912019	23	1	90.0808897876643	131	1	91.70836311651179	24	0.9583333333333334	methylated (>=50%)	Q6ZS30	Neurobeachin-like protein 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 16 protein) (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein)	NA	hit, no GO BP
GN006677	Chromosome_2A	450	1	5	39.55555555555556	0.28495440729483285	0.9779951100244498	5	0	0.9779951100244498	5	0	NA	NA	NA	0.8602150537634409	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006678	Chromosome_2A	13610	11	414	36.36296840558413	0.9224266696876492	1.7054062242998744	414	0	0.9024644220756681	77	0	1.8198002175848087	337	0	0.5364327223960662	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006679	Chromosome_2A	198	1	9	47.97979797979798	0.8005390835579514	0.7575757575757576	9	0	0.7575757575757576	9	0	NA	NA	NA	0.9340162699608315	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006680	Chromosome_2A	273	1	19	50.91575091575091	1.0901639344262295	0	19	0	0	19	0	NA	NA	NA	0.49002450122506125	63	0	unmethylated (<10%)	P11799	Myosin light chain kinase, smooth muscle (MLCK) (EC 2.7.11.18) (Telokin) [Cleaved into: Myosin light chain kinase, smooth muscle, deglutamylated form]	cardiac muscle cell development [GO:0055013]; heart morphogenesis [GO:0003007]; positive regulation of sarcomere organization [GO:0060298]; positive regulation of striated muscle contraction [GO:0045989]; tonic smooth muscle contraction [GO:0014820]	hit with GO BP
GN006681	Chromosome_2A	4898	2	159	37.30093915884034	0.9403739848000754	0.556807636219011	158	0	0.603448275862069	55	0	0.5483315055616481	103	0	0.3828274541974296	63	0	unmethylated (<10%)	A2T7H5	Homeobox protein CDX-1 (Caudal-type homeobox protein 1)	animal organ morphogenesis [GO:0009887]; anterior/posterior axis specification [GO:0009948]; cell differentiation [GO:0030154]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of somitogenesis [GO:0014807]	hit with GO BP
GN006682	Chromosome_2A	651	1	32	48.8479262672811	0.8241484353364719	3.1630170316301705	27	0	3.1630170316301705	27	0	NA	NA	NA	0.75069142631371	68	0	unmethylated (<10%)	Q9ULJ7	Ankyrin repeat domain-containing protein 50	endocytic recycling [GO:0032456]	hit with GO BP
GN006683	Chromosome_2A	1932	1	97	46.58385093167702	0.9261104192611042	0.706090026478376	88	0	0.706090026478376	88	0	NA	NA	NA	0.4909983633387889	39	0	unmethylated (<10%)	Q6PFY8	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99) (Tripartite motif-containing protein 45)	bone development [GO:0060348]; inflammatory response [GO:0006954]; negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN006684	Chromosome_2A	14604	8	240	36.35990139687757	0.4990385744846709	84.47501603820658	234	0.9230769230769231	83.04668304668304	18	0.9444444444444444	84.56299659477867	216	0.9212962962962963	3.324555628703094	46	0.021739130434782608	methylated (>=50%)	O00625	Pirin (EC 1.13.11.24) (Probable quercetin 2,3-dioxygenase PIR) (Probable quercetinase)	digestion [GO:0007586]; monocyte differentiation [GO:0030224]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN006685	Chromosome_2A	6112	8	104	35.20942408376963	0.5529802217495509	85.56013062615362	103	0.970873786407767	89.27355278093076	34	1	84.32115129710282	69	0.9565217391304348	74.10241318422601	42	0.7619047619047619	methylated (>=50%)	O00625	Pirin (EC 1.13.11.24) (Probable quercetin 2,3-dioxygenase PIR) (Probable quercetinase)	digestion [GO:0007586]; monocyte differentiation [GO:0030224]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN006686	Chromosome_2A	4116	6	88	35.64139941690962	0.682494460272238	0.6693440428380187	88	0	0.5946481665014867	31	0	0.6910452058738843	57	0	0.5930318754633062	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006687	Chromosome_2A	213	1	2	51.17370892018779	0.15010570824524314	0	1	0	0	1	0	NA	NA	NA	1.1342155009451795	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006688	Chromosome_2A	225	1	11	47.55555555555556	0.9235074626865671	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6956521739130435	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006689	Chromosome_2A	1149	2	31	42.732811140121846	0.5951378446115289	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006690	Chromosome_2A	2092	4	75	42.829827915869984	0.812385119217128	0.5559189012426422	72	0	0.7119126720455624	57	0	0.2103049421661409	15	0	0.7763975155279503	39	0	unmethylated (<10%)	Q05707	Collagen alpha-1(XIV) chain (Undulin)	cell-cell adhesion [GO:0098609]; collagen fibril organization [GO:0030199]; extracellular matrix organization [GO:0030198]	hit with GO BP
GN006691	Chromosome_2A	15322	5	337	35.24344080407258	0.7102378929423301	0.5055859088314442	304	0	0.4837595024187975	47	0	0.5085059171597633	257	0	2.816901408450704	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006692	Chromosome_2A	198	1	10	43.43434343434343	1.0714285714285714	0.4192872117400419	10	0	0.4192872117400419	10	0	NA	NA	NA	3.84204909284952	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006693	Chromosome_2A	1326	1	48	40.95022624434389	0.8662891986062717	0.4675324675324675	48	0	0.4675324675324675	48	0	NA	NA	NA	0.33034450212364325	36	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN006694	Chromosome_2A	18521	5	372	36.596296096323094	0.6000321361247927	37.98003072196621	355	0.3323943661971831	56.0303893637227	94	0.46808510638297873	33.40553549939832	261	0.2835249042145594	74.86102532427424	20	0.9	sparse (10-50%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN006695	Chromosome_2A	4313	6	90	35.845119406445626	0.6497569500241042	82.72671190623072	89	0.8876404494382022	77.36434108527132	25	0.84	84.66274839070809	64	0.90625	56.375838926174495	51	0.5686274509803921	methylated (>=50%)	Q9CWV0	Mitochondrial assembly of ribosomal large subunit protein 1	mitochondrial large ribosomal subunit assembly [GO:1902775]; negative regulation of mitochondrial translation [GO:0070130]; negative regulation of ribosome biogenesis [GO:0090071]; negative regulation of translation [GO:0017148]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN006696	Chromosome_2A	27659	19	474	36.86684261903901	0.5089435302738412	88.15129174152779	455	0.9582417582417583	93.4697996251982	131	0.9618320610687023	86.69560071019924	324	0.9567901234567902	1.1854360711261642	33	0	methylated (>=50%)	Q9HCG8	Pre-mRNA-splicing factor CWC22 homolog (Nucampholin homolog) (fSAPb)	mRNA splicing, via spliceosome [GO:0000398]; regulation of mRNA splicing, via spliceosome [GO:0048024]	hit with GO BP
GN006697	Chromosome_2A	13364	5	153	36.186770428015564	0.3511964376961822	83.28690807799443	147	0.8843537414965986	62.07165109034268	37	0.5945945945945946	87.90705563093623	110	0.9818181818181818	1.0175010175010175	67	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006698	Chromosome_2A	8082	5	156	37.80004949269983	0.5613659516566812	0.6147540983606558	156	0	0.6460875807609476	40	0	0.6067291781577496	116	0	0.38071065989847713	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006699	Chromosome_2A	15968	8	244	34.876002004008015	0.5051042050186423	59.466746554823246	243	0.6255144032921811	82.15152986886838	89	0.8426966292134831	49.35022742040286	154	0.5	0.6206644760861628	55	0	methylated (>=50%)	Q8CFH6	Serine/threonine-protein kinase SIK2 (EC 2.7.11.1) (Salt-inducible kinase 2) (SIK-2) (Serine/threonine-protein kinase SNF1-like kinase 2)	ERAD pathway [GO:0036503]; insulin receptor signaling pathway [GO:0008286]; intracellular signal transduction [GO:0035556]; lipid biosynthetic process [GO:0008610]; negative regulation of transcription from RNA polymerase II promoter by glucose [GO:0061987]; positive regulation of ERAD pathway [GO:1904294]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of insulin receptor signaling pathway [GO:0046626]	hit with GO BP
GN006700	Chromosome_2A	12310	9	254	36.95369618196588	0.6224605300930046	90.49606939550013	254	1	95.1304347826087	40	1	90.01794258373205	214	1	93.62648221343873	29	1	methylated (>=50%)	Q9Z0Z3	S-phase kinase-associated protein 2 (Cyclin-A/CDK2-associated protein p45) (F-box protein Skp2) (F-box/WD-40 protein 1) (FWD1)	defense response to virus [GO:0051607]; DNA double-strand break processing [GO:0000729]; G1/S transition of mitotic cell cycle [GO:0000082]; G2/M transition of mitotic cell cycle [GO:0000086]; innate immune response [GO:0045087]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of intracellular estrogen receptor signaling pathway [GO:0033148]; positive regulation of protein polyubiquitination [GO:1902916]; positive regulation of smooth muscle cell proliferation [GO:0048661]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; protein localization to site of double-strand break [GO:1990166]; protein polyubiquitination [GO:0000209]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN006701	Chromosome_2A	2867	4	57	37.111963725148236	0.5887954515975615	40.082181546507286	57	0.43859649122807015	29.468599033816425	11	0.18181818181818182	42.02386212991604	46	0.5	0.8817427385892116	48	0	sparse (10-50%)	P86221	Tubulin beta-4B chain (Tubulin beta-2C chain)	microtubule-based process [GO:0007017]	hit with GO BP
GN006702	Chromosome_2A	14857	24	317	38.34556101500976	0.5836279973758439	43.5359031343398	305	0.42950819672131146	69.04087414002429	74	0.7567567567567568	37.577992058990354	231	0.3246753246753247	1.896067415730337	52	0	sparse (10-50%)	Q8NB14	Ubiquitin carboxyl-terminal hydrolase 38 (EC 3.4.19.12) (Deubiquitinating enzyme 38) (HP43.8KD) (Ubiquitin thioesterase 38) (Ubiquitin-specific-processing protease 38)	negative regulation of innate immune response [GO:0045824]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; protein K33-linked deubiquitination [GO:1990168]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN006703	Chromosome_2A	13784	16	238	36.6874637260592	0.515584339248596	82.1708774202836	238	0.9033613445378151	75.85103287750945	61	0.7868852459016393	84.24827850038255	177	0.943502824858757	55.56423272159313	41	0.5853658536585366	methylated (>=50%)	Q5E9N5	Mitochondrial disaggregase (EC 3.6.1.-) (Suppressor of potassium transport defect 3) [Cleaved into: Mitochondrial disaggregase, cleaved form]	cellular response to heat [GO:0034605]	hit with GO BP
GN006704	Chromosome_2A	40471	24	523	35.240048429739815	0.416588548521932	79.65430639680898	515	0.9067961165048544	89.62897526501767	123	0.967479674796748	77.65123292531489	392	0.8877551020408163	0.41124057573680606	51	0	methylated (>=50%)	Q9P241	Phospholipid-transporting ATPase VD (EC 7.6.2.1) (ATPase class V type 10D) (P4-ATPase flippase complex alpha subunit ATP10D)	monoatomic cation transport [GO:0006812]; monoatomic ion transmembrane transport [GO:0034220]; phospholipid translocation [GO:0045332]	hit with GO BP
GN001308	Chromosome_2A	630	2	19	43.17460317460318	0.6514285714285715	4.054054054054054	19	0	3.690036900369004	18	0	8	1	0	1.9710378117457763	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006705	Chromosome_2A	2515	4	75	39.12524850894632	0.7792489465421796	3.900709219858156	46	0	2.388059701492537	21	0	4.892367906066537	25	0	4.491017964071856	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006706	Chromosome_2A	729	1	43	47.325102880658434	1.0657170055075815	0.984009840098401	43	0	0.984009840098401	43	0	NA	NA	NA	0	2	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006707	Chromosome_2A	20655	12	662	37.19680464778504	0.926603383330503	1.0512683781519008	608	0.001644736842105263	0.6503442999234889	78	0	1.095600676818951	530	0.0018867924528301887	0.5	33	0	unmethylated (<10%)	Q0VAA2	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN006708	Chromosome_2A	14588	17	169	36.44776528653688	0.35008637947726995	83.03936330393633	168	0.9642857142857143	91.00935828877006	66	1	79.25784966698383	102	0.9411764705882353	81.29462160875774	25	0.96	methylated (>=50%)	E7FCN8	Protein inturned (Inturned planar cell polarity effector homolog)	cilium assembly [GO:0060271]; establishment of planar polarity [GO:0001736]; limb development [GO:0060173]; nervous system development [GO:0007399]; regulation of smoothened signaling pathway [GO:0008589]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN006709	Chromosome_2A	1244	3	39	37.37942122186495	0.9270455153437536	0.7891770011273957	39	0	0.5586592178770949	13	0	0.889248181083266	26	0	0.7018840044329516	49	0	unmethylated (<10%)	H9J9M0	Chitin deacetylase 1 (BmCDA1) (EC 3.5.1.41)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN006710	Chromosome_2A	4164	3	136	38.208453410182514	0.8958096714491355	0.814093153610036	127	0	0.6802721088435374	19	0	0.8224617129892229	108	0	0.6967363403006968	68	0	unmethylated (<10%)	H9JW43	Chitin deacetylase 8 (BmCDA8) (EC 3.5.1.41) (Chitin deacetylase 17)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN006711	Chromosome_2A	333	1	18	43.84384384384384	1.1256338028169015	0.5952380952380952	18	0	0.5952380952380952	18	0	NA	NA	NA	0.5790190735694822	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006712	Chromosome_2A	3857	6	119	38.70884106818771	0.8264454327745467	0.32967032967032966	114	0	0.1932367149758454	29	0	0.36984352773826457	85	0	2.0833333333333335	73	0	unmethylated (<10%)	H9J9M0	Chitin deacetylase 1 (BmCDA1) (EC 3.5.1.41)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN006713	Chromosome_2A	3266	3	81	37.66074709124311	0.6995906321401371	0.7524271844660194	81	0	0.5484460694698354	26	0	0.8261731658955717	55	0	1.6895874263261297	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006714	Chromosome_2A	13218	11	168	34.55893478589802	0.4318493106062919	83.16087379499425	168	0.8571428571428571	74.17979002624672	61	0.7377049180327869	86.47536021310086	107	0.9252336448598131	1.0163749294184077	36	0	methylated (>=50%)	O94826	Mitochondrial import receptor subunit TOM70 (Mitochondrial precursor proteins import receptor) (Translocase of outer membrane 70 kDa subunit) (Translocase of outer mitochondrial membrane protein 70)	activation of innate immune response [GO:0002218]; cellular response to virus [GO:0098586]; negative regulation of cell growth involved in cardiac muscle cell development [GO:0061052]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of protein localization to mitochondrion [GO:1903749]; protein import into mitochondrial matrix [GO:0030150]; protein insertion into mitochondrial inner membrane [GO:0045039]; protein insertion into mitochondrial outer membrane [GO:0045040]; protein localization to mitochondrion [GO:0070585]; regulation of apoptotic process [GO:0042981]; response to thyroxine [GO:0097068]	hit with GO BP
GN006715	Chromosome_2A	26096	12	344	34.64898835070509	0.4409410482992968	85.45073375262055	341	0.9648093841642229	82.62548262548262	28	0.8928571428571429	85.71137797679626	313	0.9712460063897763	46.41445511010728	30	0.43333333333333335	methylated (>=50%)	Q5ZIR1	Endophilin-B1 (SH3 domain-containing GRB2-like protein B1)	endocytosis [GO:0006897]; membrane organization [GO:0061024]	hit with GO BP
GN006716	Chromosome_2A	13901	16	201	34.75289547514567	0.4791920845954403	82.29193899782135	199	0.914572864321608	83.96843725943033	118	0.923728813559322	80.90460264373309	81	0.9012345679012346	31.82024512029051	34	0.38235294117647056	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006717	Chromosome_2A	840	1	31	41.904761904761905	0.8410852713178295	0.617828773168579	31	0	0.617828773168579	31	0	NA	NA	NA	0.5178365937859609	51	0	unmethylated (<10%)	P32297	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; excitatory postsynaptic potential [GO:0060079]; locomotory behavior [GO:0007626]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; monoatomic ion transport [GO:0006811]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of acetylcholine secretion, neurotransmission [GO:0014056]; regulation of appetite [GO:0032098]; regulation of dendrite morphogenesis [GO:0048814]; regulation of membrane potential [GO:0042391]; regulation of smooth muscle contraction [GO:0006940]; response to acetylcholine [GO:1905144]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006718	Chromosome_2A	1011	1	37	41.740850642927796	0.8456999457406402	0.16992353440951571	37	0	0.16992353440951571	37	0	NA	NA	NA	0.5695977216091136	57	0	unmethylated (<10%)	P09628	Acetylcholine receptor subunit delta	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006719	Chromosome_2A	1326	1	54	40.27149321266968	1.0049261083743843	0.28225806451612906	54	0	0.28225806451612906	54	0	NA	NA	NA	0.6152849740932642	68	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006720	Chromosome_2A	8449	5	109	33.897502663037045	0.4664296046287367	82.11153981059277	109	0.9357798165137615	95.60669456066945	9	1	81.312693498452	100	0.93	87.09677419354838	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006721	Chromosome_2A	4089	1	78	41.47713377353876	0.45183664622406955	93.25991189427313	78	0.9871794871794872	93.25991189427313	78	0.9871794871794872	NA	NA	NA	91.41991924629879	34	0.9705882352941176	methylated (>=50%)	Q5BQN8	Centrosomal P4.1-associated protein (Centromere protein J) (CENP-J) (Centrosome assembly and centriole elongation protein)	centriole elongation [GO:0061511]; centriole replication [GO:0007099]; cilium assembly [GO:0060271]; positive regulation of centriole elongation [GO:1903724]; positive regulation of establishment of protein localization [GO:1904951]; regulation of centriole replication [GO:0046599]	hit with GO BP
GN006722	Chromosome_2A	1131	2	22	44.47391688770999	0.40184108527131784	95.30054644808743	22	1	95.65217391304348	17	1	93.23308270676692	5	1	28.95819054146676	49	0.2857142857142857	methylated (>=50%)	Q5ZJD3	Large subunit GTPase 1 homolog (EC 3.6.5.-)	nuclear export [GO:0051168]; ribosomal subunit export from nucleus [GO:0000054]	hit with GO BP
GN006723	Chromosome_2A	20393	21	285	35.340558034619725	0.4494253129542482	88.46016434440872	284	0.9225352112676056	91.59350891194467	74	0.972972972972973	87.5565784426544	210	0.9047619047619048	40.43157296990346	35	0.4	methylated (>=50%)	Q16513	Serine/threonine-protein kinase N2 (EC 2.7.11.13) (PKN gamma) (Protein kinase C-like 2) (Protein-kinase C-related kinase 2)	apical junction assembly [GO:0043297]; epithelial cell migration [GO:0010631]; intracellular signal transduction [GO:0035556]; positive regulation of cytokinesis [GO:0032467]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of viral genome replication [GO:0045070]; protein phosphorylation [GO:0006468]; regulation of cell motility [GO:2000145]; signal transduction [GO:0007165]; vascular endothelial cell response to laminar fluid shear stress [GO:0097700]	hit with GO BP
GN006724	Chromosome_2A	19390	9	277	35.29654461062403	0.4808502954244991	88.00775901414879	275	0.9854545454545455	85.77549271636676	28	0.9285714285714286	88.16698245828495	247	0.9919028340080972	88.6261980830671	34	1	methylated (>=50%)	Q6P7N4	Abasic site processing protein HMCES (EC 4.-.-.-) (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein) (ES cell-specific 5hmC-binding protein) (Peptidase HMCES) (EC 3.4.-.-) (SRAP domain-containing protein 1)	DNA damage response [GO:0006974]; double-strand break repair via alternative nonhomologous end joining [GO:0097681]; interstrand cross-link repair [GO:0036297]; positive regulation of isotype switching [GO:0045830]; protein-DNA covalent cross-linking repair [GO:0106300]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN006725	Chromosome_2A	324	1	13	46.60493827160494	0.7444326617179216	96.14325068870524	13	1	96.14325068870524	13	1	NA	NA	NA	92.9683813119396	69	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006726	Chromosome_2A	258	1	11	43.41085271317829	0.9193391642371235	0.8281573498964804	11	0	0.8281573498964804	11	0	NA	NA	NA	0.5340453938584779	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006727	Chromosome_2A	6386	4	189	36.078922643282176	0.9101668074324324	0.6772009029345373	188	0	0.8184523809523809	26	0	0.654606046179481	162	0	0.4493464052287582	46	0	unmethylated (<10%)	Q99M71	Mammalian ependymin-related protein 1 (MERP-1)	cell-matrix adhesion [GO:0007160]; myofibroblast contraction [GO:1990764]	hit with GO BP
GN006728	Chromosome_2A	624	2	3	39.42307692307692	0.12782519631273473	0.5208333333333334	3	0	0.5208333333333334	3	0	NA	NA	NA	1.6184404119666502	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006729	Chromosome_2A	31624	12	738	35.08095117632178	0.7585377748432491	1.346309309122567	685	0	0.2934272300469484	42	0	1.4052137369492417	643	0	1.0223048327137547	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006730	Chromosome_2A	303	1	20	48.51485148514851	1.1222222222222222	0.43731778425655976	20	0	0.43731778425655976	20	0	NA	NA	NA	0.5820298290287377	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006731	Chromosome_2A	651	2	11	40.86021505376344	0.40815047021943573	0.22371364653243847	11	0	0	5	0	0.38910505836575876	6	0	0.391644908616188	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006732	Chromosome_2A	1036	4	34	37.93436293436294	0.9123025123025122	0.3474232773595831	34	0	0.3586800573888092	27	0	0.3003003003003003	7	0	0.6223386832623649	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006733	Chromosome_2A	752	2	18	37.234042553191486	0.7193877551020408	1.2048192771084338	18	0	1.2110726643598615	16	0	1.1627906976744187	2	0	0.39603960396039606	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006734	Chromosome_2A	746	2	14	37.265415549597854	0.5508438818565401	0.2857142857142857	14	0	0.2857142857142857	14	0	NA	NA	NA	0.6295907660020986	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006735	Chromosome_2A	509	2	10	37.721021611001966	0.559648158328752	1.0204081632653061	10	0	1.0204081632653061	10	0	NA	NA	NA	0.26585643752373717	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006736	Chromosome_2A	2910	4	45	37.2852233676976	0.4507372884856329	93.37068160597572	41	1	94.44985394352483	21	1	92.37668161434978	20	1	83.37136337706788	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006737	Chromosome_2A	21369	13	388	36.1411390331789	0.5562849977255252	86.70514326574391	354	0.96045197740113	92.5390625	52	0.9807692307692307	85.82760444209413	302	0.956953642384106	90.49079754601227	5	1	methylated (>=50%)	O88307	Sortilin-related receptor (Gp250) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) (LR11) (SorLA-1) (Sorting protein-related receptor containing LDLR class A repeats) (mSorLA)	adaptive thermogenesis [GO:1990845]; amyloid-beta formation [GO:0034205]; cell migration [GO:0016477]; diet induced thermogenesis [GO:0002024]; endosome to plasma membrane protein transport [GO:0099638]; insulin receptor recycling [GO:0038020]; lysosomal protein catabolic process [GO:1905146]; negative regulation of amyloid precursor protein catabolic process [GO:1902992]; negative regulation of amyloid-beta formation [GO:1902430]; negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of cytokine-mediated signaling pathway [GO:0001960]; negative regulation of neurofibrillary tangle assembly [GO:1902997]; negative regulation of neurogenesis [GO:0050768]; negative regulation of protein-containing complex assembly [GO:0031333]; negative regulation of triglyceride catabolic process [GO:0010897]; neuropeptide signaling pathway [GO:0007218]; positive regulation of adipose tissue development [GO:1904179]; positive regulation of endocytic recycling [GO:2001137]; positive regulation of ER to Golgi vesicle-mediated transport [GO:1902953]; positive regulation of glial cell-derived neurotrophic factor production [GO:1900168]; positive regulation of insulin receptor signaling pathway [GO:0046628]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein exit from endoplasmic reticulum [GO:0070863]; positive regulation of protein localization to early endosome [GO:1902966]; post-Golgi vesicle-mediated transport [GO:0006892]; protein localization to Golgi apparatus [GO:0034067]; protein retention in Golgi apparatus [GO:0045053]; protein targeting [GO:0006605]; protein targeting to lysosome [GO:0006622]; receptor-mediated endocytosis [GO:0006898]; regulation of smooth muscle cell migration [GO:0014910]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN006738	Chromosome_2A	1480	3	53	42.972972972972975	0.7851930449754252	0.8059873344847438	53	0	0.9265858873841768	47	0	0.2994011976047904	6	0	0.9501187648456056	53	0	unmethylated (<10%)	Q01414	Transcriptional regulator ERG homolog	cell differentiation [GO:0030154]	hit with GO BP
GN006739	Chromosome_2A	2586	3	61	34.26140757927301	0.8042151629628497	0.6122448979591837	61	0	0.43914680050188204	33	0	0.7625272331154684	28	0	0.5433498700685093	58	0	unmethylated (<10%)	Q18579	ETS domain-containing transcription factor ets-5	cell differentiation [GO:0030154]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006740	Chromosome_2A	564	1	22	42.5531914893617	0.8676923076923077	0.6389776357827476	22	0	0.6389776357827476	22	0	NA	NA	NA	1.1120151885001357	51	0	unmethylated (<10%)	Q9BSE2	Transmembrane protein 79 (Mattrin)	epithelial cell maturation [GO:0002070]; establishment of skin barrier [GO:0061436]; positive regulation of epidermis development [GO:0045684]; regulated exocytosis [GO:0045055]	hit with GO BP
GN006741	Chromosome_2A	507	1	26	45.167652859960555	1.0087235996326906	0.4077471967380224	26	0	0.4077471967380224	26	0	NA	NA	NA	0.8069522036002483	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006742	Chromosome_2A	564	1	25	43.262411347517734	0.9550904287746393	0.8368200836820083	25	0	0.8368200836820083	25	0	NA	NA	NA	0.8845643520566121	47	0	unmethylated (<10%)	Q9BSE2	Transmembrane protein 79 (Mattrin)	epithelial cell maturation [GO:0002070]; establishment of skin barrier [GO:0061436]; positive regulation of epidermis development [GO:0045684]; regulated exocytosis [GO:0045055]	hit with GO BP
GN006743	Chromosome_2A	567	1	19	44.79717813051146	0.6679273358546717	0.3952569169960474	19	0	0.3952569169960474	19	0	NA	NA	NA	0.4106776180698152	59	0	unmethylated (<10%)	Q9D709	Transmembrane protein 79 (Mattrin)	cornification [GO:0070268]; cuticle development [GO:0042335]; epithelial cell maturation [GO:0002070]; establishment of skin barrier [GO:0061436]; hair follicle morphogenesis [GO:0031069]; positive regulation of epidermis development [GO:0045684]; regulated exocytosis [GO:0045055]	hit with GO BP
GN006744	Chromosome_2A	561	1	27	45.98930481283423	0.913735899137359	0.7117437722419929	26	0	0.7117437722419929	26	0	NA	NA	NA	0.4817618719889883	57	0	unmethylated (<10%)	Q9BSE2	Transmembrane protein 79 (Mattrin)	epithelial cell maturation [GO:0002070]; establishment of skin barrier [GO:0061436]; positive regulation of epidermis development [GO:0045684]; regulated exocytosis [GO:0045055]	hit with GO BP
GN006745	Chromosome_2A	558	1	26	48.5663082437276	0.7926136363636364	1.4285714285714286	26	0	1.4285714285714286	26	0	NA	NA	NA	0.5128205128205128	46	0	unmethylated (<10%)	Q9BSE2	Transmembrane protein 79 (Mattrin)	epithelial cell maturation [GO:0002070]; establishment of skin barrier [GO:0061436]; positive regulation of epidermis development [GO:0045684]; regulated exocytosis [GO:0045055]	hit with GO BP
GN006746	Chromosome_2A	3156	6	94	36.12167300380228	0.9144555139080687	3.627222122463638	93	0	0.9889470622454916	43	0	4.805194805194805	50	0	0.8022652194431336	42	0	unmethylated (<10%)	Q5U239	Transmembrane protein 145	G protein-coupled receptor signaling pathway [GO:0007186]; response to pheromone [GO:0019236]	hit with GO BP
GN006747	Chromosome_2A	1044	5	25	37.26053639846743	0.7010475423045931	0.4528985507246377	25	0	0.7320644216691069	15	0	0	10	0	7.22521137586472	60	0.016666666666666666	unmethylated (<10%)	P51871	Cytochrome P450 4F6 (EC 1.14.14.1) (CYPIVF6)	leukotriene metabolic process [GO:0006691]	hit with GO BP
GN006748	Chromosome_2A	306	1	25	48.69281045751634	1.6783677051338306	7.366771159874608	25	0	7.366771159874608	25	0	NA	NA	NA	42.422469280280865	27	0.4074074074074074	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006749	Chromosome_2A	2767	4	76	37.04372967112396	0.8036718845542375	0.573394495412844	73	0	0.7705986959098993	40	0	0.3886729594669628	33	0	9.168157423971378	56	0	unmethylated (<10%)	Q9Z2F6	B-cell lymphoma 3 protein homolog (BCL-3)	antimicrobial humoral response [GO:0019730]; canonical NF-kappaB signal transduction [GO:0007249]; defense response to bacterium [GO:0042742]; defense response to protozoan [GO:0042832]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extracellular matrix organization [GO:0030198]; follicular dendritic cell differentiation [GO:0002268]; germinal center formation [GO:0002467]; humoral immune response mediated by circulating immunoglobulin [GO:0002455]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; marginal zone B cell differentiation [GO:0002315]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; positive regulation of type II interferon production [GO:0032729]; protein import into nucleus [GO:0006606]; regulation of apoptotic process [GO:0042981]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]; response to UV-C [GO:0010225]; response to virus [GO:0009615]; spleen development [GO:0048536]; T-helper 1 type immune response [GO:0042088]; T-helper 2 cell differentiation [GO:0045064]	hit with GO BP
GN006750	Chromosome_2A	192	1	4	45.833333333333336	0.39751552795031053	96.73913043478261	4	1	96.73913043478261	4	1	NA	NA	NA	90.73059360730593	63	0.9841269841269841	NA	NA	NA	NA	no Swiss-Prot hit
GN006751	Chromosome_2A	14962	13	248	35.41638818339794	0.5336633190604151	77.377579927155	222	0.8648648648648649	84.43997317236754	31	0.8709677419354839	76.58792650918635	191	0.8638743455497382	60.88096486628212	63	0.7777777777777778	methylated (>=50%)	E9QI36	Histidine--tRNA ligase (EC 6.1.1.21)	histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]; regulation of vasculature development [GO:1901342]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN006752	Chromosome_2A	6140	8	35	34.039087947882734	0.19713986656135415	59.905144107989784	35	0.6857142857142857	45.550351288056206	11	0.6363636363636364	66.40169581346052	24	0.7083333333333334	58.40621963070943	30	0.6666666666666666	methylated (>=50%)	Q8NEY3	Spermatogenesis-associated protein 4 (Testis and spermatogenesis cell-related protein 2) (Testis spermatocyte apoptosis-related gene 2 protein)	regulation of cytoskeleton organization [GO:0051493]	hit with GO BP
GN006753	Chromosome_2A	300	1	2	40.333333333333336	0.16648168701442842	67.41573033707866	2	1	67.41573033707866	2	1	NA	NA	NA	75.78059071729957	22	0.8181818181818182	NA	NA	NA	NA	no Swiss-Prot hit
GN006754	Chromosome_2A	384	1	1	45.3125	0.052509230138110215	64.70588235294117	1	1	64.70588235294117	1	1	NA	NA	NA	77.91629563668745	21	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN006755	Chromosome_2A	975	2	22	37.23076923076923	0.6727090259047858	9.565217391304348	22	0.045454545454545456	12.671594508975712	17	0.058823529411764705	0.31446540880503143	5	0	43.47826086956522	46	0.391304347826087	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006756	Chromosome_2A	21466	7	213	35.94055716016025	0.3222038344320907	90.08136381247579	187	0.9679144385026738	93.1742876076872	38	1	89.55190017016449	149	0.959731543624161	87.78366111951588	28	0.9642857142857143	methylated (>=50%)	Q9P2G9	Kelch-like protein 8	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN006757	Chromosome_2A	14460	9	201	34.53665283540802	0.4673416696507375	88.59272462124281	197	0.8781725888324873	77.80872794800372	23	0.782608695652174	89.62364636960767	174	0.8908045977011494	61.93252811328613	48	0.6458333333333334	methylated (>=50%)	Q8BTV1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TUSC3 (Oligosaccharyl transferase subunit TUSC3) (Magnesium uptake/transporter TUSC3) (Protein N33) (Tumor suppressor candidate 3)	cognition [GO:0050890]; magnesium ion transmembrane transport [GO:1903830]; magnesium ion transport [GO:0015693]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN006758	Chromosome_2A	2967	4	127	41.08527131782946	1.0170338301421331	2.0539906103286385	124	0	3.408316291751875	64	0	1.0303967027305512	60	0	0.5233889434085705	51	0	unmethylated (<10%)	Q13887	Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Colon krueppel-like factor) (GC-box-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2)	cellular response to endothelin [GO:1990859]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006759	Chromosome_2A	432	1	14	36.342592592592595	0.9834146341463414	0.3372681281618887	14	0	0.3372681281618887	14	0	NA	NA	NA	0.8253692441355344	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006760	Chromosome_2A	956	2	9	34.20502092050209	0.3251700680272109	29.276315789473685	7	0	29.276315789473685	7	0	NA	NA	NA	0.8600917431192661	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006761	Chromosome_2A	572	2	11	45.62937062937063	0.3938900713659697	4.854368932038835	5	0	4.395604395604396	4	0	8.333333333333334	1	0	1.3761467889908257	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006762	Chromosome_2A	20410	7	493	35.242528172464475	0.7854561503809827	2.020239190432383	492	0	1.9748653500897666	34	0	2.0242914979757085	458	0	0.5335365853658537	70	0	unmethylated (<10%)	P40237	CD82 antigen (C33 antigen) (IA4) (Inducible membrane protein R2) (Metastasis suppressor Kangai-1 homolog) (CD antigen CD82)	NA	hit, no GO BP
GN006763	Chromosome_2A	1955	5	54	40.40920716112532	0.6766223361640763	0.540784136998648	53	0	0.861244019138756	28	0	0.2555366269165247	25	0	0.5113221329437546	72	0	unmethylated (<10%)	Q61451	Leukocyte surface antigen CD53 (Cell surface glycoprotein CD53) (CD antigen CD53)	positive regulation of myoblast fusion [GO:1901741]; receptor clustering [GO:0043113]; T cell receptor signaling pathway [GO:0050852]	hit with GO BP
GN006764	Chromosome_2A	2512	4	90	38.61464968152866	0.9625996321275291	0.7952738014087707	90	0	0.9382329945269742	34	0	0.7367072389493914	56	0	0.4735969689793985	56	0	unmethylated (<10%)	Q0IUU4	Putative calmodulin-like protein 2	NA	hit, no GO BP
GN006765	Chromosome_2A	687	1	45	47.59825327510917	1.1953831876885006	0.5776173285198556	45	0	0.5776173285198556	45	0	NA	NA	NA	0.397456279809221	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006766	Chromosome_2A	4458	8	95	36.20457604306864	0.6684607614117053	90.51779935275081	94	1	93.16353887399464	24	1	89.67576791808874	70	1	92.63341067285383	28	1	methylated (>=50%)	Q8WU90	Zinc finger CCCH domain-containing protein 15 (DRG family-regulatory protein 1) (Likely ortholog of mouse immediate early response erythropoietin 4)	cytoplasmic translation [GO:0002181]; positive regulation of GTPase activity [GO:0043547]	hit with GO BP
GN006767	Chromosome_2A	300	1	11	39.666666666666664	0.9401709401709402	0.591715976331361	11	0	0.591715976331361	11	0	NA	NA	NA	0.9017132551848512	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006768	Chromosome_2A	906	1	47	41.94260485651214	1.1986825807904515	8.94242547978767	47	0.06382978723404255	8.94242547978767	47	0.06382978723404255	NA	NA	NA	0.6797583081570997	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006769	Chromosome_2A	14108	10	159	33.63339948965126	0.3988239950245943	87.3931820270146	159	0.9874213836477987	86.3169897377423	20	0.95	87.4875074955027	139	0.9928057553956835	65.00771604938272	88	0.9659090909090909	methylated (>=50%)	Q6GMK8	Mannose-1-phosphate guanylyltransferase regulatory subunit alpha-A (GDP-mannose pyrophosphorylase A-A) (GTP-mannose-1-phosphate guanylyltransferase subunit alpha-A)	GDP-mannose biosynthetic process [GO:0009298]	hit with GO BP
GN006770	Chromosome_2A	2938	4	83	39.14227365554799	0.7397046689963114	7.232065059541098	80	0.05	18.484848484848484	20	0.2	4.563420768954366	60	0	1.13314447592068	30	0	unmethylated (<10%)	Q9D9G2	Phosphatidylethanolamine-binding protein 4 (PEBP-4)	NA	hit, no GO BP
GN006771	Chromosome_2A	17972	13	260	35.45515245938126	0.46210625283147283	78.40559109215826	260	0.9423076923076923	89.63906581740977	50	1	76.58476151145985	210	0.9285714285714286	79.6068796068796	11	0.9090909090909091	methylated (>=50%)	Q05084	Islet cell autoantigen 1 (69 kDa islet cell autoantigen) (ICA69) (Islet cell autoantigen p69) (ICAp69) (p69)	membrane bending [GO:0097753]; regulation of secretion [GO:0051046]	hit with GO BP
GN006772	Chromosome_2A	867	1	17	38.63898500576701	0.5333260963960053	46.15384615384615	17	0.4117647058823529	46.15384615384615	17	0.4117647058823529	NA	NA	NA	43.36055006446068	35	0.45714285714285713	sparse (10-50%)	P34473	Uncharacterized protein F58A4.6	NA	hit, no GO BP
GN006773	Chromosome_2A	3750	4	41	37.653333333333336	0.31014741836314785	87.29689807976366	41	0.975609756097561	91.32075471698113	17	1	84.70873786407768	24	0.9583333333333334	83.36909871244636	17	0.8823529411764706	methylated (>=50%)	B0S8I0	GTP-binding protein 8	NA	hit, no GO BP
GN006774	Chromosome_2A	12988	11	209	37.73483215275639	0.4520523353080809	90.03282874338866	201	0.9900497512437811	92.02159568086383	81	0.9876543209876543	89.16404612159329	120	0.9916666666666667	0.7291385363219012	54	0	methylated (>=50%)	Q54TA1	Probable serine/threonine-protein kinase drkC (EC 2.7.11.1) (Receptor-like kinase 3) (Receptor-like kinase C) (Vesicle-associated receptor tyrosine kinase-like protein 3)	phagocytosis [GO:0006909]; phagolysosome assembly [GO:0001845]	hit with GO BP
GN006775	Chromosome_2A	29185	28	523	35.20986808291931	0.5813399598418048	92.8485875376121	520	0.9673076923076923	85.9720457433291	81	0.9135802469135802	93.74174808555586	439	0.9772209567198178	10.086455331412104	43	0.11627906976744186	methylated (>=50%)	Q5R614	Leucine--tRNA ligase, cytoplasmic (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS)	leucyl-tRNA aminoacylation [GO:0006429]	hit with GO BP
GN006776	Chromosome_2A	6580	4	112	34.57446808510638	0.569681996608005	73.11271975180972	85	0.7411764705882353	53.20855614973262	12	0.3333333333333333	74.48415622697127	73	0.8082191780821918	60.283960092095164	47	0.46808510638297873	methylated (>=50%)	Q8WVJ2	NudC domain-containing protein 2	NA	hit, no GO BP
GN006777	Chromosome_2A	1317	1	25	44.64692482915718	0.38704785639554706	95.90100541376644	25	1	95.90100541376644	25	1	NA	NA	NA	92.42155121373594	20	1	methylated (>=50%)	Q3SZP8	Transcriptional adapter 2-alpha (Transcriptional adapter 2-like) (ADA2-like protein)	chromatin remodeling [GO:0006338]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of embryonic development [GO:0045995]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN006778	Chromosome_2A	30693	3	829	35.666112794448246	0.8503457762428511	1.103198824460269	809	0	0.4140786749482402	60	0	1.151510753078356	749	0	3.1966224366706877	64	0.046875	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006779	Chromosome_2A	22609	9	210	34.27396169666947	0.3177930621248961	67.46377940489172	210	0.819047619047619	63.43321482986288	39	0.7692307692307693	68.19394608519643	171	0.8304093567251462	1.785036080516521	43	0	methylated (>=50%)	O62770	Sperm surface protein Sp17 (Sperm autoantigenic protein 17)	binding of sperm to zona pellucida [GO:0007339]	hit with GO BP
GN006780	Chromosome_2A	2576	4	34	37.150621118012424	0.38253638253638256	55.725190839694655	34	0.6764705882352942	47.45762711864407	25	0.6	76.2749445676275	9	0.8888888888888888	0.8058017727639001	35	0	methylated (>=50%)	P50615	Protein BTG3 (Abundant in neuroepithelium area protein) (BTG family member 3) (Protein Tob5)	negative regulation of mitotic cell cycle [GO:0045930]	hit with GO BP
GN006781	Chromosome_2A	5121	6	97	36.24292130443273	0.5822838079251281	94.77677268748177	96	0.9895833333333334	96.69669669669669	27	1	94.1607246097514	69	0.9855072463768116	73.81316998468607	11	0.7272727272727273	methylated (>=50%)	F1N5V1	Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.4.19.12) (Deubiquitinating enzyme 37) (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37)	G1/S transition of mitotic cell cycle [GO:0000082]; protein deubiquitination [GO:0016579]; protein K11-linked deubiquitination [GO:0035871]; protein K48-linked deubiquitination [GO:0071108]; regulation of DNA replication [GO:0006275]	hit with GO BP
GN006782	Chromosome_2A	10994	9	146	34.59159541568128	0.4439366533357672	88.3114374034003	146	0.9178082191780822	88.27751196172248	33	0.9090909090909091	88.31797235023042	113	0.9203539823008849	0.89086859688196	38	0	methylated (>=50%)	Q8BGU5	Cyclin-Y (Cyclin fold protein 1)	G2/M transition of mitotic cell cycle [GO:0000086]; positive regulation of autophagy [GO:0010508]; positive regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045737]; regulation of canonical Wnt signaling pathway [GO:0060828]	hit with GO BP
GN006783	Chromosome_2A	11104	11	228	35.89697406340058	0.6375784975612114	90.83439839328099	228	0.9956140350877193	94.86899563318778	35	1	90.32810466470306	193	0.9948186528497409	93.59895493141737	34	1	methylated (>=50%)	Q05048	Cleavage stimulation factor subunit 1 (CF-1 50 kDa subunit) (Cleavage stimulation factor 50 kDa subunit) (CSTF 50 kDa subunit) (CstF-50)	mRNA 3'-end processing [GO:0031124]; regulation of mRNA 3'-end processing [GO:0031440]	hit with GO BP
GN006784	Chromosome_2A	6061	6	53	33.42682725622834	0.3136060996563574	79.00892582333026	53	0.8490566037735849	71.87060478199719	17	0.7058823529411765	81.0086682427108	36	0.9166666666666666	45.17475221700574	24	0.5416666666666666	methylated (>=50%)	Q09221	Copine family protein 2	NA	hit, no GO BP
GN006785	Chromosome_2A	462	1	18	57.79220779220779	0.48574766355140186	0.6896551724137931	9	0	0.6896551724137931	9	0	NA	NA	NA	1.209234151703921	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006786	Chromosome_2A	243	1	15	58.43621399176955	0.7236450268016676	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9814612868047983	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006787	Chromosome_2A	519	1	37	60.886319845857415	0.771731704376482	1.8867924528301887	9	0	1.8867924528301887	9	0	NA	NA	NA	0.5277044854881267	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006788	Chromosome_2A	3177	6	81	38.62134088762984	0.6885639365317208	0.6219578150351541	81	0	0.8741258741258742	40	0	0.4036326942482341	41	0	0.624783061437001	61	0	unmethylated (<10%)	Q96NR8	Retinol dehydrogenase 12 (EC 1.1.1.300) (All-trans and 9-cis retinol dehydrogenase) (Short chain dehydrogenase/reductase family 7C member 2)	cellular detoxification of aldehyde [GO:0110095]; photoreceptor cell maintenance [GO:0045494]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; visual perception [GO:0007601]	hit with GO BP
GN006789	Chromosome_2A	12504	7	337	37.53198976327575	0.7662809664871825	1.00145510570915	316	0	0.9981285090455396	46	0	1.001984126984127	270	0	0.5285118219749653	55	0	unmethylated (<10%)	Q96NR8	Retinol dehydrogenase 12 (EC 1.1.1.300) (All-trans and 9-cis retinol dehydrogenase) (Short chain dehydrogenase/reductase family 7C member 2)	cellular detoxification of aldehyde [GO:0110095]; photoreceptor cell maintenance [GO:0045494]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; visual perception [GO:0007601]	hit with GO BP
GN006790	Chromosome_2A	636	1	40	41.35220125786164	1.4737573861661453	0.798175598631699	40	0	0.798175598631699	40	0	NA	NA	NA	0.5509641873278237	62	0	unmethylated (<10%)	Q6R2W3	SCAN domain-containing protein 3 (Transposon-derived Buster4 transposase-like protein) (Zinc finger BED domain-containing protein 9)	DNA integration [GO:0015074]; positive regulation of cell cycle [GO:0045787]; positive regulation of epithelial cell proliferation [GO:0050679]	hit with GO BP
GN006791	Chromosome_2A	429	1	20	41.49184149184149	1.088142041851617	0.8658008658008658	20	0	0.8658008658008658	20	0	NA	NA	NA	0.7635409210212359	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006792	Chromosome_2A	555	1	14	45.765765765765764	0.4853823088455772	0.704225352112676	11	0	0.704225352112676	11	0	NA	NA	NA	0.7233273056057866	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006793	Chromosome_2A	486	1	17	44.8559670781893	0.7148914078047937	0.13568521031207598	17	0	0.13568521031207598	17	0	NA	NA	NA	1.0420841683366733	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006794	Chromosome_2A	585	1	22	46.15384615384615	0.73125	38.768115942028984	22	0.3181818181818182	38.768115942028984	22	0.3181818181818182	NA	NA	NA	36.892460773057785	45	0.28888888888888886	sparse (10-50%)	Q96SZ5	2-aminoethanethiol dioxygenase (EC 1.13.11.19) (Cysteamine dioxygenase)	cellular response to hypoxia [GO:0071456]; taurine biosynthetic process [GO:0042412]	hit with GO BP
GN006795	Chromosome_2A	10033	10	173	34.85497857071663	0.5709644205844814	64.77611940298507	166	0.7951807228915663	66.57381615598885	35	0.7142857142857143	64.50774508784697	131	0.816793893129771	19.44922547332186	45	0.2222222222222222	methylated (>=50%)	Q9QXW0	F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat protein 6) (F-box protein FBL6)	NA	hit, no GO BP
GN006796	Chromosome_2A	1506	2	41	39.9734395750332	0.6870437956204379	45.17061885482938	41	0.3902439024390244	55.18716577540107	20	0.55	33.37531486146096	21	0.23809523809523808	52.79503105590062	39	0.5384615384615384	sparse (10-50%)	Q6NWX7	N-terminal Xaa-Pro-Lys N-methyltransferase 1 (EC 2.1.1.244) (Alpha N-terminal protein methyltransferase 1A) (Methyltransferase-like protein 11A) (X-Pro-Lys N-terminal protein methyltransferase 1A) (NTM1A)	chromosome segregation [GO:0007059]; N-terminal peptidyl-glycine methylation [GO:0018013]; N-terminal peptidyl-proline dimethylation [GO:0018016]; N-terminal peptidyl-serine dimethylation [GO:0035572]; N-terminal peptidyl-serine trimethylation [GO:0035573]; spindle organization [GO:0007051]	hit with GO BP
GN006797	Chromosome_2A	18394	8	122	35.527889529194304	0.23251217439956898	78.08285163776493	122	0.8852459016393442	72.30910763569457	25	0.8	78.95247332686712	97	0.9072164948453608	39.310995752713545	48	0.3541666666666667	methylated (>=50%)	Q2KID0	Exosome complex component RRP4 (Exosome component 2) (Ribosomal RNA-processing protein 4)	CUT catabolic process [GO:0071034]; exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; nuclear polyadenylation-dependent rRNA catabolic process [GO:0071035]; nuclear-transcribed mRNA catabolic process [GO:0000956]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; positive regulation of cell growth [GO:0030307]; TRAMP-dependent tRNA surveillance pathway [GO:0071038]; U4 snRNA 3'-end processing [GO:0034475]	hit with GO BP
GN006798	Chromosome_2A	11313	4	106	35.64925307168744	0.30398801466226594	89.025069637883007	103	0.970873786407767	91.07883817427386	9	1	88.82316948806853	94	0.9680851063829787	56.94966190833959	40	0.65	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006799	Chromosome_2A	13397	21	402	35.813988206314846	0.9359249715995044	2.2518694765465668	401	0	2.098157270571064	114	0	2.298532262531155	287	0	4.9523110785033015	49	0	unmethylated (<10%)	Q9VBW3	Tyrosine kinase receptor Cad96Ca (EC 2.7.10.1) (Cadherin-96Ca) (Tyrosine kinase receptor HD-14)	calcium-dependent cell-cell adhesion [GO:0016339]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; Golgi organization [GO:0007030]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell size [GO:0045792]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of wound healing [GO:0090303]; protein phosphorylation [GO:0006468]; wound healing [GO:0042060]	hit with GO BP
GN006800	Chromosome_2A	1957	3	30	37.45528870720491	0.4371816638370119	46.412884333821374	30	0.6333333333333333	61.11929307805597	19	0.7368421052631579	31.87772925764192	11	0.45454545454545453	4.324801412180053	40	0.025	sparse (10-50%)	A4IHG1	Leucine-rich repeat-containing protein 58	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of taurine biosynthetic process [GO:0062089]	hit with GO BP
GN006801	Chromosome_2A	10636	8	149	34.40203083866115	0.47502780150772594	73.59882005899705	149	0.8791946308724832	82.01669877970456	19	0.9473684210526315	72.28408065001504	130	0.8692307692307693	6.787878787878788	33	0.06060606060606061	methylated (>=50%)	P40855	Peroxisomal biogenesis factor 19 (33 kDa housekeeping protein) (Peroxin-19) (Peroxisomal farnesylated protein)	establishment of protein localization to peroxisome [GO:0072663]; negative regulation of lipid binding [GO:1900131]; peroxisome fission [GO:0016559]; peroxisome membrane biogenesis [GO:0016557]; peroxisome organization [GO:0007031]; protein folding [GO:0006457]; protein import into peroxisome membrane [GO:0045046]; protein stabilization [GO:0050821]; protein targeting to peroxisome [GO:0006625]	hit with GO BP
GN006802	Chromosome_2A	3435	6	92	35.633187772925766	0.8437482478647311	0.7225433526011561	92	0	0.648202710665881	35	0	0.7626310772163966	57	0	0.5530253741054001	52	0	unmethylated (<10%)	P26153	Neuronal acetylcholine receptor subunit beta-4 (Neuronal acetylcholine receptor non-alpha-3 chain) (N-alpha 3)	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020667	Chromosome_2A	2542	6	29	32.17938630999213	0.44357129103687304	26.93437806072478	23	0.21739130434782608	15.189873417721518	8	0.125	34.34504792332268	15	0.26666666666666666	9.714285714285714	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006803	Chromosome_2A	3512	7	94	36.13325740318906	0.8201245112214124	0.5007967220578192	94	0	0.37453183520599254	33	0	0.5559189012426422	61	0	0.2695417789757412	50	0	unmethylated (<10%)	P26153	Neuronal acetylcholine receptor subunit beta-4 (Neuronal acetylcholine receptor non-alpha-3 chain) (N-alpha 3)	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN006804	Chromosome_2A	8361	6	177	37.32807080492764	0.6135030644123558	0.5685489081276651	173	0	0.6455777921239509	38	0	0.5492730210016155	135	0	0.8699531563685032	71	0	unmethylated (<10%)	A0A0L8FVQ9	Chemotactile receptor for terpenes 1 (CRT1)	NA	hit, no GO BP
GN006805	Chromosome_2A	2861	4	118	43.376441803565186	0.8809646829186825	41.85917060951851	118	0.423728813559322	46.33077765607886	96	0.5208333333333334	27.517564402810304	22	0	0.8419689119170984	71	0	sparse (10-50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006806	Chromosome_2A	2457	5	86	39.804639804639805	0.8912086243546917	0.707361802462667	86	0	0.5775211017325633	57	0	0.8939974457215837	29	0	5.335556481867445	73	0.1095890410958904	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006807	Chromosome_2A	13818	20	451	38.50774352294109	0.8850159935514545	0.5677785663591199	431	0	0.5678022712090849	96	0	0.5677739346081054	335	0	0.9535160905840286	21	0	unmethylated (<10%)	O15075	Serine/threonine-protein kinase DCLK1 (EC 2.7.11.1) (Doublecortin domain-containing protein 3A) (Doublecortin-like and CAM kinase-like 1) (Doublecortin-like kinase 1)	axon extension [GO:0048675]; central nervous system development [GO:0007417]; endosomal transport [GO:0016197]; intracellular signal transduction [GO:0035556]; nervous system development [GO:0007399]; protein phosphorylation [GO:0006468]; response to virus [GO:0009615]	hit with GO BP
GN006808	Chromosome_2A	12767	12	398	35.348946502702276	1.0069469958642228	0.7007751937984497	398	0	0.9868421052631579	66	0	0.6499671364930987	332	0	2.5049701789264414	64	0.015625	unmethylated (<10%)	Q501I9	Solute carrier family 49 member 4 homolog (Disrupted in renal carcinoma protein 2 homolog)	pyridoxine transport [GO:0031923]	hit with GO BP
GN006809	Chromosome_2A	15554	10	313	37.03870387038704	0.5887374679897412	88.94857203637717	313	0.9904153354632588	92.01653944020356	61	0.9836065573770492	88.33258828788556	252	0.9920634920634921	40.51724137931034	36	0.2777777777777778	methylated (>=50%)	Q5RGB8	Kelch-like protein 26	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN006810	Chromosome_2A	4029	4	139	41.35021097046413	0.807094835599559	52.10556957112362	120	0.4666666666666667	60.13537584609904	59	0.6440677966101694	42.49786871270247	61	0.29508196721311475	0.4164187983343248	74	0	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006811	Chromosome_2A	47219	5	1217	35.693259069442384	0.8095281718593016	1.5317194446200197	1052	0	0.2783576896311761	44	0	1.5708512579846174	1008	0	0.313588850174216	62	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN006812	Chromosome_2A	8410	4	217	37.89536266349584	0.7201973491566251	0.5395476983124785	216	0	0.5119453924914675	69	0	0.549709439296372	147	0	0.49335863377609107	45	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN006813	Chromosome_2A	5455	6	70	33.78551787351054	0.45376978892604447	74.73528166031343	70	0.8428571428571429	71.14337568058076	9	0.6666666666666666	75.20978182690003	61	0.8688524590163934	21.764705882352942	71	0.1267605633802817	methylated (>=50%)	Q8N5T2	TBC1 domain family member 19	NA	hit, no GO BP
GN006814	Chromosome_2A	291	1	13	47.422680412371136	0.8083333333333333	1.3888888888888888	13	0	1.3888888888888888	13	0	NA	NA	NA	0.3167062549485352	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006815	Chromosome_2A	651	1	33	47.31182795698925	0.9133928571428571	0.8594229588704727	33	0	0.8594229588704727	33	0	NA	NA	NA	1.2110091743119267	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006816	Chromosome_2A	492	1	25	42.073170731707314	1.1712054846695867	2.574102964118565	25	0	2.574102964118565	25	0	NA	NA	NA	17.652276759314017	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006817	Chromosome_2A	487	2	21	40.86242299794661	1.0332390381895333	0.28382213812677387	21	0	0.32751091703056767	19	0	0	2	0	0.6451612903225806	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006818	Chromosome_2A	1275	1	18	38.03921568627451	0.43859649122807015	2.0047169811320753	18	0	2.0047169811320753	18	0	NA	NA	NA	2.9726516052318668	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006819	Chromosome_2A	216	1	12	54.166666666666664	0.8069738480697385	0	11	0	0	11	0	NA	NA	NA	0.406669377795852	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006820	Chromosome_2A	309	1	10	48.86731391585761	0.5474840538625089	1.0344827586206897	10	0	1.0344827586206897	10	0	NA	NA	NA	0.5284791544333529	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006821	Chromosome_2A	16202	7	306	33.73040365386989	0.6724074373957885	0.9111456420398362	296	0	0.6131549609810479	32	0	0.9543836945972177	264	0	0.647332988089073	80	0	unmethylated (<10%)	A0A8M2B5N2	Tetraspanin-18B	regulation of angiogenesis [GO:0045765]; regulation of sprouting angiogenesis [GO:1903670]	hit with GO BP
GN006822	Chromosome_2A	21599	15	368	36.15908143895551	0.5221629641950873	91.16810589999483	313	0.987220447284345	96.68686868686869	45	1	90.35815939278937	268	0.9850746268656716	83.19374651032942	30	0.9	methylated (>=50%)	P61221	ATP-binding cassette sub-family E member 1 (EC 3.6.5.-) (2'-5'-oligoadenylate-binding protein) (HuHP68) (RNase L inhibitor) (Ribonuclease 4 inhibitor) (RNS4I)	negative regulation of endoribonuclease activity [GO:0060702]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; translational initiation [GO:0006413]; translational termination [GO:0006415]	hit with GO BP
GN006823	Chromosome_2A	318	1	10	40.880503144654085	0.7528409090909091	0.28328611898017	10	0	0.28328611898017	10	0	NA	NA	NA	0.43478260869565216	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006824	Chromosome_2A	823	3	15	33.0498177399757	0.6692145064238088	0.6749156355455568	15	0	0.33003300330033003	5	0	0.8532423208191127	10	0	0.8002371072910492	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006825	Chromosome_2A	3358	4	84	34.09767718880286	0.8630647500504856	0.5994005994005994	84	0	0.24752475247524752	18	0	0.688360450563204	66	0	0.4418262150220913	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006826	Chromosome_2A	3728	5	95	39.40450643776824	0.6564718530463957	0.8595988538681948	37	0	0.7892659826361483	26	0	1.0460251046025104	11	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006827	Chromosome_2A	387	1	17	45.47803617571059	0.988580015026296	0.5412719891745602	17	0	0.5412719891745602	17	0	NA	NA	NA	4.166666666666667	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006828	Chromosome_2A	3742	4	60	37.03901656867985	0.47366289176553983	7.538963392533526	60	0.016666666666666666	4.143897996357013	51	0.0196078431372549	20.78152753108348	9	0	1.356768424298489	60	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN006829	Chromosome_2A	4035	4	142	40.421313506815366	0.8631016042780749	2.358735095904614	123	0	0.7389162561576355	70	0	4.157549234135668	53	0	5.434782608695652	9	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN006830	Chromosome_2A	17415	17	268	34.114269308067755	0.5333209922251018	84.10593048873702	266	0.9473684210526315	91.193259037782	62	0.9838709677419355	82.70121754121323	204	0.9362745098039216	52.90758047767394	70	0.6142857142857143	methylated (>=50%)	Q9Y496	Kinesin-like protein KIF3A (EC 3.6.4.-) (Microtubule plus end-directed kinesin motor 3A)	anterograde axonal transport [GO:0008089]; centriole-centriole cohesion [GO:0010457]; cilium assembly [GO:0060271]; microtubule anchoring at centrosome [GO:0034454]; organelle organization [GO:0006996]; plus-end-directed vesicle transport along microtubule [GO:0072383]; positive regulation of smoothened signaling pathway [GO:0045880]; protein localization to cell junction [GO:1902414]; protein localization to non-motile cilium [GO:0097499]; protein transport [GO:0015031]	hit with GO BP
GN006831	Chromosome_2A	439	3	15	38.724373576309794	0.9114186851211072	0.24937655860349128	15	0	0.2638522427440633	14	0	0	1	0	0.48596112311015116	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006832	Chromosome_2A	345	1	3	48.405797101449274	0.16371401455235685	0	3	0	0	3	0	NA	NA	NA	0.4498977505112474	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006833	Chromosome_2A	26865	8	766	35.1535455053043	0.9232182830920277	0.9620939988444824	755	0	0.4069175991861648	54	0	0.9909362365562984	701	0	0.8264462809917356	30	0	unmethylated (<10%)	F1R8P4	Glycine receptor subunit alpha-2	chloride transmembrane transport [GO:1902476]	hit with GO BP
GN006834	Chromosome_2A	19165	15	493	35.03782937646752	0.8434678797591526	6.038251366120218	462	0.06926406926406926	1.5542603386067166	65	0	6.918341776978809	397	0.08060453400503778	2.1404431092752536	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006835	Chromosome_2A	18390	16	573	36.94942903752039	0.9301241934487294	3.0339083878643662	573	0	1.334848054529963	72	0	3.3328336581222207	501	0	4.136947218259629	30	0	unmethylated (<10%)	Q7T2C4	Prestin (Solute carrier family 26 member 5)	chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; oxalate transport [GO:0019532]; regulation of membrane potential [GO:0042391]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN006836	Chromosome_2A	23146	23	597	36.30432904173507	0.785085103295603	0.5975883043431864	585	0	0.4869857262804366	137	0	0.6273129343803593	448	0	0.6329113924050633	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006837	Chromosome_2A	612	1	20	41.50326797385621	0.7588815177630355	0.546448087431694	12	0	0.546448087431694	12	0	NA	NA	NA	0.6139154160982264	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006838	Chromosome_2A	1347	1	21	43.05864884929473	0.33929064063043507	1.0574018126888218	21	0	1.0574018126888218	21	0	NA	NA	NA	0.5347593582887701	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006839	Chromosome_2A	1929	5	7	32.65940902021773	0.1367517039527653	0.4884004884004884	7	0	0.2777777777777778	3	0	0.6535947712418301	4	0	0.6320691949434465	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006840	Chromosome_2A	54459	18	1406	36.14462256009108	0.7907280860930772	0.8651502843216897	1388	0	0.772986167615948	80	0	0.8699927322474456	1308	0	0.5279831045406547	46	0	unmethylated (<10%)	Q75WE7	von Willebrand factor A domain-containing protein 5A (Loss of heterozygosity 11 chromosomal region 2 gene A protein homolog) (Mast cell surface antigen 1) (Masa-1)	NA	hit, no GO BP
GN006841	Chromosome_2A	2844	2	59	39.55696202531646	0.5304695304695305	0.8064516129032258	8	0	1.3513513513513513	5	0	0	3	0	1.1251758087201125	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006842	Chromosome_2A	1026	1	12	39.96101364522417	0.3058046248230297	0.4329004329004329	12	0	0.4329004329004329	12	0	NA	NA	NA	0.3489531405782652	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006843	Chromosome_2A	604	2	23	38.90728476821192	1.0076889598143044	0.851063829787234	23	0	0.4444444444444444	17	0	1.8867924528301887	6	0	1.4002333722287048	29	0	unmethylated (<10%)	O00534	von Willebrand factor A domain-containing protein 5A (Breast cancer suppressor candidate 1) (BCSC-1) (Loss of heterozygosity 11 chromosomal region 2 gene A protein)	NA	hit, no GO BP
GN006844	Chromosome_2A	372	1	16	39.516129032258064	1.1079672375279226	0.5889281507656066	16	0	0.5889281507656066	16	0	NA	NA	NA	0.9304871373836892	40	0	unmethylated (<10%)	Q75WE7	von Willebrand factor A domain-containing protein 5A (Loss of heterozygosity 11 chromosomal region 2 gene A protein homolog) (Mast cell surface antigen 1) (Masa-1)	NA	hit, no GO BP
GN006845	Chromosome_2A	1017	3	25	39.233038348082594	0.656230642163948	0.3853564547206166	25	0	0.19801980198019803	8	0	0.5628517823639775	17	0	9.376609994848016	69	0	unmethylated (<10%)	Q75WE7	von Willebrand factor A domain-containing protein 5A (Loss of heterozygosity 11 chromosomal region 2 gene A protein homolog) (Mast cell surface antigen 1) (Masa-1)	NA	hit, no GO BP
GN006846	Chromosome_2A	1184	2	38	38.09121621621622	0.8853207398661944	0.27991602519244224	38	0	1.0443864229765014	11	0	0	27	0	0.6624953993375046	51	0	unmethylated (<10%)	Q75WE7	von Willebrand factor A domain-containing protein 5A (Loss of heterozygosity 11 chromosomal region 2 gene A protein homolog) (Mast cell surface antigen 1) (Masa-1)	NA	hit, no GO BP
GN006847	Chromosome_2A	449	2	16	36.97104677060133	1.042973286875726	0.13386880856760375	16	0	0.13386880856760375	16	0	NA	NA	NA	0.25356576862123614	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006848	Chromosome_2A	24186	19	629	36.26064665508972	0.7912600294315767	1.0433504775900073	615	0	0.6012950971322849	90	0	1.1268343815513626	525	0	0.5910165484633569	43	0	unmethylated (<10%)	Q75WE7	von Willebrand factor A domain-containing protein 5A (Loss of heterozygosity 11 chromosomal region 2 gene A protein homolog) (Mast cell surface antigen 1) (Masa-1)	NA	hit, no GO BP
GN006849	Chromosome_2A	3452	3	90	33.34298957126303	0.9414260173934124	0.5701615457713018	90	0	0.6116207951070336	33	0	0.546583850931677	57	0	0.5016722408026756	46	0	unmethylated (<10%)	P63157	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1)	midbrain development [GO:0030901]; negative regulation of neuron apoptotic process [GO:0043524]; neuron migration [GO:0001764]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory perception of sound [GO:0007605]	hit with GO BP
GN006850	Chromosome_2A	2785	2	143	41.508078994614	1.2037873864615292	0.46048722519310753	143	0	0.5050505050505051	13	0	0.4577020202020202	130	0	37.70764119601329	44	0.4090909090909091	unmethylated (<10%)	Q9BYN0	Sulfiredoxin-1 (EC 1.8.98.2)	cellular response to oxidative stress [GO:0034599]; response to oxidative stress [GO:0006979]	hit with GO BP
GN006851	Chromosome_2A	652	2	5	37.88343558282209	0.21811856014987288	84	5	1	84	5	1	NA	NA	NA	90.69767441860465	20	1	methylated (>=50%)	P40337	von Hippel-Lindau disease tumor suppressor (Protein G7) (pVHL)	amyloid fibril formation [GO:1990000]; cell morphogenesis [GO:0000902]; cellular response to hypoxia [GO:0071456]; negative regulation of apoptotic process [GO:0043066]; negative regulation of autophagy [GO:0010507]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of signal transduction [GO:0009968]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of cell differentiation [GO:0045597]; positive regulation of DNA-templated transcription [GO:0045893]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; proteolysis [GO:0006508]; regulation of cellular response to hypoxia [GO:1900037]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]	hit with GO BP
GN006852	Chromosome_2A	12432	12	142	36.003861003861005	0.35299290652509713	85.6956578432651	141	0.9858156028368794	83.64038319823139	26	1	86.13751584283904	115	0.9826086956521739	0.45385779122541603	55	0	methylated (>=50%)	Q8IYT2	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 (EC 2.1.1.296) (Cap methyltransferase 2) (Cap2 2'O-ribose methyltransferase 2) (HMTr2) (MTr2) (FtsJ methyltransferase domain-containing protein 1) (Protein adrift homolog)	7-methylguanosine mRNA capping [GO:0006370]	hit with GO BP
GN006853	Chromosome_2A	1209	1	59	45.16129032258065	0.9608162715517241	46.20253164556962	59	0.3559322033898305	46.20253164556962	59	0.3559322033898305	NA	NA	NA	0.48158640226628896	58	0	sparse (10-50%)	Q9RAH6	Isonocardicin synthase (EC 2.5.1.38) (Nocardicin 3-amino-3-carboxypropyltransferase)	NA	hit, no GO BP
GN006854	Chromosome_2A	32134	23	430	33.84265886599863	0.468642930392435	88.84235163684518	425	0.9647058823529412	93.37436640115858	45	1	88.42101720017503	380	0.9605263157894737	57.36704446381866	60	0.5333333333333333	methylated (>=50%)	Q9DCD2	Pre-mRNA-splicing factor SYF1 (XPA-binding protein 2)	blastocyst development [GO:0001824]; cerebral cortex development [GO:0021987]; DNA-templated transcription [GO:0006351]; generation of catalytic spliceosome for first transesterification step [GO:0000349]; mRNA splicing, via spliceosome [GO:0000398]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN001821	Chromosome_2A	755	2	4	36.95364238410596	0.15625	17.624521072796934	4	0	17.624521072796934	4	0	NA	NA	NA	28.560431100846806	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001822	Chromosome_2A	2849	4	35	34.74903474903475	0.40738410501329825	25.56342562781713	33	0	27.912254160363087	28	0	12.121212121212121	5	0	32.635009310986966	40	0.225	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006855	Chromosome_2A	520	2	15	40.38461538461539	0.7075471698113207	0.145985401459854	15	0	0.1594896331738437	13	0	0	2	0	2.2122654718566226	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006856	Chromosome_2A	793	4	14	33.0390920554855	0.6593811249034863	0.5167958656330749	14	0	0	5	0	0.7702182284980744	9	0	0.600817111271329	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006857	Chromosome_2A	707	2	27	43.28147100424328	0.8155949583422346	7.033465683494044	27	0	7.8964401294498385	23	0	0.9174311926605505	4	0	1.9501625135427951	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003696	Chromosome_2A	191	1	15	55.49738219895288	1.1087461300309598	0.23696682464454977	15	0	0.23696682464454977	15	0	NA	NA	NA	2.058432934926959	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006858	Chromosome_2A	1090	3	65	49.72477064220183	0.9792403803626714	0.29433406916850624	65	0	0.33444816053511706	31	0	0.2628120893561104	34	0	1.4130791981597108	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006859	Chromosome_2A	43342	18	845	36.12662082968022	0.6061478576488908	73.12484907027289	556	0.9046762589928058	86.7235656709341	38	1	72.39510445026843	518	0.8976833976833977	84.97330282227307	19	0.9473684210526315	methylated (>=50%)	Q9CW79	Golgin subfamily A member 1 (Golgin-97)	cell-cell adhesion mediated by cadherin [GO:0044331]; transepithelial transport [GO:0070633]	hit with GO BP
GN006860	Chromosome_2A	19644	10	206	33.19588678476889	0.38066909630288537	68.7368503078002	202	0.8465346534653465	70.08639308855291	17	0.9411764705882353	68.63189720332578	185	0.8378378378378378	71.36596055514974	22	0.9545454545454546	methylated (>=50%)	O02768	Prostaglandin G/H synthase 2 (EC 1.14.99.1) (Cyclooxygenase-2) (COX-2) (PHS II) (Prostaglandin H2 synthase 2) (PGH synthase 2) (PGHS-2) (Prostaglandin-endoperoxide synthase 2)	brown fat cell differentiation [GO:0050873]; cellular response to hypoxia [GO:0071456]; cellular response to non-ionic osmotic stress [GO:0071471]; cyclooxygenase pathway [GO:0019371]; negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress [GO:1902219]; positive regulation of brown fat cell differentiation [GO:0090336]; positive regulation of fever generation [GO:0031622]; positive regulation of prostaglandin biosynthetic process [GO:0031394]; prostaglandin biosynthetic process [GO:0001516]; regulation of blood pressure [GO:0008217]; regulation of neuroinflammatory response [GO:0150077]; response to oxidative stress [GO:0006979]	hit with GO BP
GN006861	Chromosome_2A	29946	16	263	37.764643024110065	0.24632723429473477	78.63720073664825	251	0.8764940239043825	74.84170536091177	46	0.782608695652174	79.33774834437087	205	0.8975609756097561	10.530546623794212	22	0	methylated (>=50%)	P49147	Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase); Lysophospholipase (EC 3.1.1.5)]	arachidonate metabolic process [GO:0019369]; arachidonate secretion [GO:0050482]; glycerophospholipid catabolic process [GO:0046475]; leukotriene biosynthetic process [GO:0019370]; monoacylglycerol biosynthetic process [GO:0006640]; phosphatidylcholine acyl-chain remodeling [GO:0036151]; phosphatidylcholine catabolic process [GO:0034638]; phosphatidylglycerol catabolic process [GO:0034478]; platelet activating factor biosynthetic process [GO:0006663]; positive regulation of macrophage activation [GO:0043032]; positive regulation of platelet activation [GO:0010572]; positive regulation of T-helper 1 type immune response [GO:0002827]; prostaglandin biosynthetic process [GO:0001516]	hit with GO BP
GN006862	Chromosome_2A	26550	47	240	36.01129943502825	0.2806104272051545	90.85395608225862	239	1	92.01371876531113	82	1	90.39267270778525	157	1	NA	NA	NA	methylated (>=50%)	Q5T4S7	E3 ubiquitin-protein ligase UBR4 (EC 2.3.2.27) (600 kDa retinoblastoma protein-associated factor) (p600) (N-recognin-4) (Retinoblastoma-associated factor of 600 kDa) (RBAF600)	cytoplasm protein quality control [GO:0140455]; cytoplasm protein quality control by the ubiquitin-proteasome system [GO:0071629]; endosome organization [GO:0007032]; HRI-mediated signaling [GO:0140468]; negative regulation of fatty acid biosynthetic process [GO:0045717]; negative regulation of HRI-mediated signaling [GO:0141191]; positive regulation of autophagy [GO:0010508]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked ubiquitination [GO:0070936]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; response to oxidative stress [GO:0006979]; ubiquitin-dependent protein catabolic process [GO:0006511]; ubiquitin-dependent protein catabolic process via the N-end rule pathway [GO:0071596]	hit with GO BP
GN006863	Chromosome_2A	27132	57	294	36.28556685832228	0.3305134256235323	92.66458057527981	294	0.9965986394557823	93.21527629613826	103	1	92.44824407006956	191	0.9947643979057592	91.02941176470588	12	1	methylated (>=50%)	Q5T4S7	E3 ubiquitin-protein ligase UBR4 (EC 2.3.2.27) (600 kDa retinoblastoma protein-associated factor) (p600) (N-recognin-4) (Retinoblastoma-associated factor of 600 kDa) (RBAF600)	cytoplasm protein quality control [GO:0140455]; cytoplasm protein quality control by the ubiquitin-proteasome system [GO:0071629]; endosome organization [GO:0007032]; HRI-mediated signaling [GO:0140468]; negative regulation of fatty acid biosynthetic process [GO:0045717]; negative regulation of HRI-mediated signaling [GO:0141191]; positive regulation of autophagy [GO:0010508]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked ubiquitination [GO:0070936]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; response to oxidative stress [GO:0006979]; ubiquitin-dependent protein catabolic process [GO:0006511]; ubiquitin-dependent protein catabolic process via the N-end rule pathway [GO:0071596]	hit with GO BP
GN006864	Chromosome_2A	9752	12	69	35.408121410992614	0.22895274622301193	79.19893781810136	68	0.8970588235294118	80.68181818181819	25	0.84	78.25299021384559	43	0.9302325581395349	84.26666666666667	23	1	methylated (>=50%)	Q5XKL5	BTB/POZ domain-containing protein 8 (AP2-interacting clathrin-endocytosis) (APache)	synaptic vesicle budding from endosome [GO:0016182]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN006865	Chromosome_2A	59742	7	1183	35.80897860801446	0.618288139329806	41.15644133449956	766	0.36161879895561355	80.859375	16	1	40.180514658814495	750	0.348	78.58729453576188	30	0.9333333333333333	sparse (10-50%)	P09118	Uricase (EC 1.7.3.3) (Urate oxidase)	purine nucleobase catabolic process [GO:0006145]; urate catabolic process [GO:0019628]	hit with GO BP
GN006866	Chromosome_2A	708	1	37	47.175141242937855	0.9516129032258065	NA	0	NA	NA	NA	NA	NA	NA	NA	84.08932309839497	25	1	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN006867	Chromosome_2A	5969	10	37	33.85826771653543	0.21674609499208988	60.255417956656345	37	0.7297297297297297	55.37280701754386	14	0.6428571428571429	62.91866028708134	23	0.782608695652174	59.66321243523316	63	0.5873015873015873	methylated (>=50%)	Q0VFN8	Cilia- and flagella-associated protein 157	sperm axoneme assembly [GO:0007288]	hit with GO BP
GN006868	Chromosome_2A	7469	8	106	36.88579461775338	0.4187048883473375	74.25075367973045	106	0.8018867924528302	73.4159779614325	18	0.8333333333333334	74.37410950539385	88	0.7954545454545454	2.4807056229327453	33	0	methylated (>=50%)	Q92506	(3R)-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12) (17-beta-hydroxysteroid dehydrogenase 8) (17-beta-HSD 8) (HSD17B8) (3-ketoacyl-[acyl-carrier-protein] reductase alpha subunit) (KAR alpha subunit) (3-oxoacyl-[acyl-carrier-protein] reductase) (Estradiol 17-beta-dehydrogenase 8) (EC 1.1.1.62) (Protein Ke6) (Ke6) (Short chain dehydrogenase/reductase family 30C member 1) (Testosterone 17-beta-dehydrogenase 8) (EC 1.1.1.239)	estrogen biosynthetic process [GO:0006703]; fatty acid biosynthetic process [GO:0006633]; protein heterotetramerization [GO:0051290]	hit with GO BP
GN006869	Chromosome_2A	438	1	13	39.954337899543376	0.7914929107589658	0	6	0	0	6	0	NA	NA	NA	7.965116279069767	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006870	Chromosome_2A	7883	9	40	37.1559051122669	0.15075324029584583	55.06072874493927	18	0.7222222222222222	50	5	0.6	56.855575868372945	13	0.7692307692307693	82.79816513761467	19	0.8947368421052632	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006871	Chromosome_2A	270	1	17	48.888888888888886	1.0838252656434475	0.3492433061699651	17	0	0.3492433061699651	17	0	NA	NA	NA	0.39229671897289586	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006872	Chromosome_2A	9399	8	117	33.301415044153636	0.45271938415708785	77.80184082295615	114	0.8947368421052632	80.95823095823096	28	0.9285714285714286	77.126331010911	86	0.8837209302325582	16.848154869933456	63	0.047619047619047616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006873	Chromosome_2A	4288	3	46	33.09235074626866	0.3924724122424778	73.89567147613762	45	0.8222222222222222	32.5	8	0.375	79.77186311787072	37	0.918918918918919	0.5873140172278778	47	0	methylated (>=50%)	Q5RJU3	Dynein axonemal assembly factor 19 (Coiled-coil domain-containing protein 103)	determination of left/right symmetry [GO:0007368]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; inner dynein arm assembly [GO:0036159]	hit with GO BP
GN006874	Chromosome_2A	438	1	19	42.922374429223744	0.9776785714285714	0.45662100456621	10	0	0.45662100456621	10	0	NA	NA	NA	4.545454545454546	2	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006875	Chromosome_2A	378	1	14	42.592592592592595	0.8166666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006876	Chromosome_2A	468	1	18	45.51282051282051	0.7514719000892061	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9202453987730062	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006877	Chromosome_2A	1733	3	61	41.48874783612233	0.8235023759445353	NA	0	NA	NA	NA	NA	NA	NA	NA	0	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006878	Chromosome_2A	1733	3	61	41.431044431621466	0.8256248047485161	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8368200836820083	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006879	Chromosome_2A	11613	3	353	38.11246017394299	0.8370929513823587	0.4573668735707285	60	0	0.6221719457013575	18	0	0.23201856148491878	42	0	0.4123057405645417	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006880	Chromosome_2A	2482	5	49	36.784850926672036	0.5867612293144208	62.68115942028985	23	0.4782608695652174	51.324503311258276	19	0.3684210526315789	93.30357142857143	4	1	0.3450655624568668	36	0	methylated (>=50%)	A7MAZ3	Ubiquitin-like modifier-activating enzyme 5 (Ubiquitin-activating enzyme 5) (UFM1-activating enzyme)	erythrocyte differentiation [GO:0030218]; megakaryocyte differentiation [GO:0030219]; protein K69-linked ufmylation [GO:1990592]; protein ufmylation [GO:0071569]; regulation of intracellular estrogen receptor signaling pathway [GO:0033146]; response to endoplasmic reticulum stress [GO:0034976]; reticulophagy [GO:0061709]	hit with GO BP
GN006881	Chromosome_2A	3086	4	58	35.029163966299414	0.6192070850342489	90.54435483870968	58	0.9827586206896551	87.04663212435233	4	1	90.68596601636249	54	0.9814814814814815	91.61462979482604	19	1	methylated (>=50%)	Q8VE47	Ubiquitin-like modifier-activating enzyme 5 (Ubiquitin-activating enzyme 5) (UFM1-activating enzyme)	erythrocyte differentiation [GO:0030218]; megakaryocyte differentiation [GO:0030219]; neuromuscular process [GO:0050905]; protein K69-linked ufmylation [GO:1990592]; protein ufmylation [GO:0071569]; regulation of intracellular estrogen receptor signaling pathway [GO:0033146]; regulation of type II interferon production [GO:0032649]; response to endoplasmic reticulum stress [GO:0034976]; reticulophagy [GO:0061709]	hit with GO BP
GN006882	Chromosome_2A	36472	23	452	36.75422241719675	0.36849915449258935	85.9142846000858	450	0.9311111111111111	95.23720232514532	202	0.995049504950495	79.27488816184817	248	0.8790322580645161	75.20938023450586	8	0.875	methylated (>=50%)	Q9BYW2	Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.359) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (Protein-lysine N-methyltransferase SETD2) (EC 2.1.1.-) (SET domain-containing protein 2) (hSET2) (p231HBP)	defense response to virus [GO:0051607]; endodermal cell differentiation [GO:0035987]; microtubule cytoskeleton organization involved in mitosis [GO:1902850]; mismatch repair [GO:0006298]; nucleosome organization [GO:0034728]; peptidyl-lysine trimethylation [GO:0018023]; positive regulation of autophagy [GO:0010508]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of ossification [GO:0045778]; regulation of cytokinesis [GO:0032465]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair via homologous recombination [GO:0010569]; regulation of gene expression [GO:0010468]; regulation of mRNA export from nucleus [GO:0010793]; regulation of protein localization to chromatin [GO:1905634]; response to alkaloid [GO:0043279]; response to metal ion [GO:0010038]; response to type I interferon [GO:0034340]; stem cell differentiation [GO:0048863]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN006883	Chromosome_2A	6350	4	115	34.55118110236221	0.6074012707807758	78.84895902400213	115	0.9130434782608695	60.047281323877066	6	0.6666666666666666	79.96628266366957	109	0.926605504587156	0.6680369989722508	33	0	methylated (>=50%)	P42678	Eukaryotic translation initiation factor eIF1 (Protein translation factor SUI1 homolog)	NA	hit, no GO BP
GN006884	Chromosome_2A	42453	19	605	35.18714814029633	0.4624679672780073	59.38770289092925	587	0.5502555366269165	80.64663023679417	41	0.8536585365853658	57.972288754813086	546	0.5274725274725275	0.29563932002956395	38	0	methylated (>=50%)	Q8K1N4	Spermatogenesis-associated serine-rich protein 2 (Serine-rich spermatocytes and round spermatid 59 kDa protein) (p59scr)	NA	hit, no GO BP
GN006885	Chromosome_2A	16811	41	120	34.32276485634406	0.24360237646717867	74.27688851446223	120	0.8916666666666667	78.4738041002278	76	0.9342105263157895	67.53294289897511	44	0.8181818181818182	1.0394110004330879	40	0	methylated (>=50%)	F1P4W9	Cilia- and flagella-associated protein 65 (Coiled-coil domain-containing protein 108)	acrosome assembly [GO:0001675]; cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]; sperm axoneme assembly [GO:0007288]; sperm mitochondrial sheath assembly [GO:0120317]; spermatogenesis [GO:0007283]	hit with GO BP
GN006886	Chromosome_2A	4864	3	143	36.2047697368421	0.8973428767526228	2.498580352072686	143	0.006993006993006993	12.444933920704846	19	0.05263157894736842	1.0267275097783573	124	0	0.7420340462680053	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006887	Chromosome_2A	18319	22	484	35.07287515694088	0.8591349112958113	1.040410132689988	484	0	0.6943348587659776	119	0	1.1490267941161905	365	0	0.957972805933251	57	0	unmethylated (<10%)	Q68CR1	Protein sel-1 homolog 3 (Suppressor of lin-12-like protein 3) (Sel-1L3)	NA	hit, no GO BP
GN006888	Chromosome_2A	468	1	19	39.957264957264954	1.0206611570247934	0.6389776357827476	19	0	0.6389776357827476	19	0	NA	NA	NA	0.6595218466611706	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006889	Chromosome_2A	426	1	8	35.44600938967136	0.6207650273224044	0.8130081300813008	8	0	0.8130081300813008	8	0	NA	NA	NA	2.917981072555205	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006890	Chromosome_2A	297	1	19	51.515151515151516	0.9712564543889846	0.5244755244755245	19	0	0.5244755244755245	19	0	NA	NA	NA	0.5484460694698354	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006891	Chromosome_2A	1347	4	22	37.639198218262806	0.4651389106890598	12.077294685990339	22	0	7.2669826224328595	10	0	15.808823529411764	12	0	2.368615840118431	71	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006892	Chromosome_2A	8884	11	239	36.69518235029266	0.803510312204352	0.6201550387596899	239	0	0.4923903312444047	133	0	0.7946210268948656	106	0	0.6193868070610096	49	0	unmethylated (<10%)	Q6ZMT9	Death domain-containing protein 1	signal transduction [GO:0007165]	hit with GO BP
GN006893	Chromosome_2A	19901	7	452	34.41535601226069	0.7674049301932748	1.2578128032920532	451	0	0.635470826112074	45	0	1.3026469119360746	406	0	0.5457463884430177	44	0	unmethylated (<10%)	Q5RGB8	Kelch-like protein 26	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN006894	Chromosome_2A	642	1	9	44.70404984423676	0.2806761877003789	0	5	0	0	5	0	NA	NA	NA	2.6338147833474936	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006895	Chromosome_2A	564	1	15	40.248226950354606	0.6727099236641222	0.9090909090909091	15	0	0.9090909090909091	15	0	NA	NA	NA	6.133417641479608	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006896	Chromosome_2A	499	2	4	31.2625250501002	0.3335561497326203	91.17647058823529	3	1	87.21804511278195	2	1	96.19047619047619	1	1	64.16344561016014	43	0.4418604651162791	NA	O43805	Microtubule nucleation factor SSNA1 (Nuclear autoantigen of 14 kDa) (Sjoegren syndrome nuclear autoantigen 1)	axon arborization [GO:0140060]; axon extension [GO:0048675]; axonogenesis [GO:0007409]; cell division [GO:0051301]; microtubule cytoskeleton organization [GO:0000226]; microtubule nucleation [GO:0007020]	hit with GO BP
GN006897	Chromosome_2A	1298	3	29	34.66872110939907	0.7453271028037384	1.1428571428571428	29	0	1.8604651162790697	12	0	0.8247422680412371	17	0	0.5545286506469501	52	0	unmethylated (<10%)	O95999	B-cell lymphoma/leukemia 10 (B-cell CLL/lymphoma 10) (Bcl-10) (CARD-containing molecule enhancing NF-kappa-B) (CARD-like apoptotic protein) (hCLAP) (CED-3/ICH-1 prodomain homologous E10-like regulator) (CIPER) (Cellular homolog of vCARMEN) (cCARMEN) (Cellular-E10) (c-E10) (Mammalian CARD-containing adapter molecule E10) (mE10)	adaptive immune response [GO:0002250]; antifungal innate immune response [GO:0061760]; apoptotic signaling pathway [GO:0097190]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to mechanical stimulus [GO:0071260]; innate immune response [GO:0045087]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; negative regulation of mature B cell apoptotic process [GO:0002906]; neural tube closure [GO:0001843]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of lymphotoxin A production [GO:0032761]; positive regulation of mast cell cytokine production [GO:0032765]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of T cell receptor signaling pathway [GO:0050862]; programmed cell death [GO:0012501]; protein homooligomerization [GO:0051260]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; response to food [GO:0032094]; T cell receptor signaling pathway [GO:0050852]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN006898	Chromosome_2A	402	1	13	51.99004975124378	0.4790979097909791	0.746268656716418	13	0	0.746268656716418	13	0	NA	NA	NA	0.15037593984962405	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006899	Chromosome_2A	561	1	14	52.406417112299465	0.36728395061728397	2.73972602739726	6	0	2.73972602739726	6	0	NA	NA	NA	3.9215686274509802	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006900	Chromosome_2A	831	1	37	40.19253910950662	1.144500279173646	0.3399048266485384	37	0	0.3399048266485384	37	0	NA	NA	NA	1.8726591760299625	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006901	Chromosome_2A	489	1	10	45.39877300613497	0.4076019004751188	0	10	0	0	10	0	NA	NA	NA	0.48999591670069415	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006902	Chromosome_2A	1216	2	42	42.92763157894737	0.7498238195912614	0.8432888264230499	41	0	1.1664899257688228	30	0	0.20833333333333334	11	0	0.4209844559585492	62	0	unmethylated (<10%)	P31316	GS homeobox 2 (Genetic-screened homeobox 2) (Homeobox protein GSH-2)	brain development [GO:0007420]; central nervous system development [GO:0007417]; forebrain dorsal/ventral pattern formation [GO:0021798]; forebrain morphogenesis [GO:0048853]; generation of neurons [GO:0048699]; hindbrain morphogenesis [GO:0021575]; neuron fate commitment [GO:0048663]; neuron fate specification [GO:0048665]; olfactory bulb development [GO:0021772]; olfactory bulb interneuron differentiation [GO:0021889]; pattern specification process [GO:0007389]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of oligodendrocyte differentiation [GO:0048714]; regulation of cell migration [GO:0030334]; regulation of respiratory gaseous exchange by nervous system process [GO:0002087]; spinal cord association neuron differentiation [GO:0021527]; subpallium development [GO:0021544]; subpallium neuron fate commitment [GO:0060163]; telencephalon regionalization [GO:0021978]	hit with GO BP
GN006903	Chromosome_2A	387	1	18	43.15245478036176	1.0072296124927704	0.7800312012480499	18	0	0.7800312012480499	18	0	NA	NA	NA	0.39588281868566905	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006904	Chromosome_2A	531	1	12	38.4180790960452	0.6139319780325657	0.47058823529411764	12	0	0.47058823529411764	12	0	NA	NA	NA	0.2557544757033248	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006905	Chromosome_2A	26104	13	654	34.726478700582284	0.8311999610497103	0.9031175730462743	653	0	0.4792332268370607	91	0	0.9623044323359781	562	0	11.327975507079985	68	0	unmethylated (<10%)	Q91755	Glutamate receptor ionotropic, kainate 2 (GluK2) (Glutamate receptor 6) (GluR-6) (GluR6)	detection of cold stimulus involved in thermoception [GO:0120169]; modulation of chemical synaptic transmission [GO:0050804]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN006906	Chromosome_2A	1006	3	26	38.66799204771372	0.694271911663216	1.3157894736842106	6	0	1.3157894736842106	6	0	NA	NA	NA	1.1309836927932666	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006907	Chromosome_2A	1933	2	26	37.29953440248319	0.38763169666959757	1.8404907975460123	8	0	2.272727272727273	6	0	0	2	0	1.5050167224080269	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006908	Chromosome_2A	13116	13	330	34.49222323879231	0.8460512992927876	0.6013326832439461	330	0	0.3922594142259414	87	0	0.6559617355654254	243	0	0.69416088199265	42	0	unmethylated (<10%)	P48058	Glutamate receptor 4 (GluR-4) (GluR4) (AMPA-selective glutamate receptor 4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4)	glutamate receptor signaling pathway [GO:0007215]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN006909	Chromosome_2A	14864	23	115	34.02852529601722	0.26763091621190216	65.26867627785059	115	0.7043478260869566	67.63875823142051	39	0.717948717948718	64.35319767441861	76	0.6973684210526315	34.32343234323432	34	0.35294117647058826	methylated (>=50%)	A2AU72	Armadillo repeat-containing protein 3	flagellated sperm motility [GO:0030317]; ribophagy [GO:0034517]; spermatid development [GO:0007286]	hit with GO BP
GN006910	Chromosome_2A	816	1	35	45.833333333333336	0.816933638443936	16.793893129770993	21	0	16.793893129770993	21	0	NA	NA	NA	5.970924195223261	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006911	Chromosome_2A	600	1	24	45.333333333333336	0.779600454766932	27.170868347338935	17	0	27.170868347338935	17	0	NA	NA	NA	12.123335669236159	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006912	Chromosome_2A	924	1	40	45.77922077922078	0.8264758497316637	22.448979591836736	32	0.125	22.448979591836736	32	0.125	NA	NA	NA	17.064846416382252	65	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006913	Chromosome_2A	676	2	25	45.26627218934911	0.7244513031550068	51.74825174825175	8	0.5	51.53846153846154	7	0.42857142857142855	53.84615384615385	1	1	23.093681917211327	66	0.06060606060606061	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006914	Chromosome_2A	16114	9	285	34.988209010798066	0.5785642152875833	6.945598006644518	208	0.038461538461538464	56.13577023498694	7	0.7142857142857143	4.908638771759109	201	0.014925373134328358	4.446946242611877	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006915	Chromosome_2A	38313	25	436	33.88667032077885	0.39738891585282804	69.35253800925443	435	0.8298850574712644	58.362369337979096	31	0.6774193548387096	70.05292180156175	404	0.8415841584158416	69.32203389830508	8	0.75	methylated (>=50%)	O15457	MutS protein homolog 4 (hMSH4)	mismatch repair [GO:0006298]; reciprocal meiotic recombination [GO:0007131]	hit with GO BP
GN006916	Chromosome_2A	1011	1	15	38.67457962413452	0.43435298161196084	1.4981273408239701	12	0	1.4981273408239701	12	0	NA	NA	NA	0.5008347245409015	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006917	Chromosome_2A	5298	9	254	40.3359758399396	1.2199405301519382	1.5976951283394447	97	0	1.0320478001086366	47	0	2.12443095599393	50	0	0.7767995857068877	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006918	Chromosome_2A	673	2	14	46.062407132243685	0.3923217854763491	7.949790794979079	14	0	6.161137440758294	12	0	21.428571428571427	2	0	5.86080586080586	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006919	Chromosome_2A	1035	1	26	52.94685990338164	0.3603567411216455	1.3201320132013201	18	0	1.3201320132013201	18	0	NA	NA	NA	2.43988684582744	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006920	Chromosome_2A	20096	11	308	37.75378184713376	0.43169061845008483	83.98991112178717	154	0.8506493506493507	65.61181434599156	31	0.6129032258064516	87.77520278099652	123	0.9105691056910569	61.61497952018724	49	0.7142857142857143	methylated (>=50%)	A0A1D3PCM3	Serine O-succinyltransferase (SST) (EC 2.3.1.-)	L-cysteine biosynthetic process [GO:0019344]; L-homoserine metabolic process [GO:0009092]	hit with GO BP
GN006921	Chromosome_2A	498	1	16	48.795180722891565	0.5446343130553657	NA	0	NA	NA	NA	NA	NA	NA	NA	52.91479820627803	11	0.36363636363636365	NA	NA	NA	NA	no Swiss-Prot hit
GN006922	Chromosome_2A	240	1	5	42.5	0.46153846153846156	0.4983388704318937	5	0	0.4983388704318937	5	0	NA	NA	NA	0.7216494845360825	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006923	Chromosome_2A	2873	6	90	40.58475461190393	0.7657249466950959	0.8808651665794522	85	0	0.8025929927457941	47	0	0.9825546420693804	38	0	0.6645478185495521	50	0	unmethylated (<10%)	P20478	Glutamine synthetase 2, cytoplasmic (GS-c) (EC 6.3.1.2) (Glutamate--ammonia ligase 2)	L-glutamate catabolic process [GO:0006538]; L-glutamine biosynthetic process [GO:1901704]; synapse assembly [GO:0007416]	hit with GO BP
GN006924	Chromosome_2A	1935	2	70	37.054263565891475	1.0551859526665939	0.5963590709353421	70	0	0.8171603677221655	27	0	0.49841413683733576	43	0	0.5156202608431908	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006925	Chromosome_2A	14065	12	225	37.06363313188766	0.4661785329177248	47.360993508326274	224	0.47767857142857145	30.953926022063595	41	0.21951219512195122	50.14304577464789	183	0.5355191256830601	0.4222972972972973	54	0	sparse (10-50%)	Q9D489	Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2	cell differentiation [GO:0030154]; oocyte differentiation [GO:0009994]; positive regulation of transcription by RNA polymerase II [GO:0045944]; primary ovarian follicle growth [GO:0001545]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; spermatogenesis [GO:0007283]	hit with GO BP
GN006926	Chromosome_2A	456	1	11	45.175438596491226	0.48449724717473197	0.6147540983606558	11	0	0.6147540983606558	11	0	NA	NA	NA	0.38058991436726924	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006927	Chromosome_2A	300	1	4	46.666666666666664	0.25510204081632654	0	4	0	0	4	0	NA	NA	NA	0.4995004995004995	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006928	Chromosome_2A	312	1	5	47.11538461538461	0.2947845804988662	0.5882352941176471	5	0	0.5882352941176471	5	0	NA	NA	NA	0.8818342151675485	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006929	Chromosome_2A	351	1	9	46.43874643874644	0.4870490286771508	0	9	0	0	9	0	NA	NA	NA	0.8278145695364238	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006930	Chromosome_2A	663	1	38	47.81297134238311	1.0036650466098318	0.78125	36	0	0.78125	36	0	NA	NA	NA	0.9447674418604651	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006931	Chromosome_2A	1227	1	44	43.43928280358598	0.761574269995768	0.814663951120163	44	0	0.814663951120163	44	0	NA	NA	NA	0.7941618373041425	64	0	unmethylated (<10%)	D4AE59	Serine/threonine-protein kinase STK11 (EC 2.7.11.1) (Liver kinase B1 homolog) (LKB1)	activation of protein kinase activity [GO:0032147]; anoikis [GO:0043276]; axonogenesis [GO:0007409]; cellular response to glucose starvation [GO:0042149]; cellular response to UV-B [GO:0071493]; dendrite extension [GO:0097484]; DNA damage response [GO:0006974]; establishment of cell polarity [GO:0030010]; G1 to G0 transition [GO:0070314]; glucose homeostasis [GO:0042593]; Golgi localization [GO:0051645]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of epithelial cell proliferation involved in prostate gland development [GO:0060770]; negative regulation of TORC1 signaling [GO:1904262]; peptidyl-threonine phosphorylation [GO:0018107]; positive regulation of autophagy [GO:0010508]; positive regulation of axonogenesis [GO:0050772]; positive regulation of cellular senescence [GO:2000774]; positive regulation of gluconeogenesis [GO:0045722]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; positive regulation of vesicle transport along microtubule [GO:1901610]; positive thymic T cell selection [GO:0045059]; protein autophosphorylation [GO:0046777]; protein dephosphorylation [GO:0006470]; protein phosphorylation [GO:0006468]; regulation of cell growth [GO:0001558]; regulation of dendrite morphogenesis [GO:0048814]; regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051896]; regulation of Wnt signaling pathway [GO:0030111]; response to activity [GO:0014823]; response to glucagon [GO:0033762]; response to ionizing radiation [GO:0010212]; response to lipid [GO:0033993]; response to peptide hormone [GO:0043434]; response to thyroid hormone [GO:0097066]; spermatid development [GO:0007286]; T cell receptor signaling pathway [GO:0050852]; tissue homeostasis [GO:0001894]; vasculature development [GO:0001944]	hit with GO BP
GN006932	Chromosome_2A	22521	20	371	35.42915501087874	0.5263275559635843	76.90201729106629	330	0.7424242424242424	88.91439816333224	69	0.7971014492753623	74.84103314388611	261	0.7279693486590039	69.5906432748538	22	0.7727272727272727	methylated (>=50%)	Q9H9B1	Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.367) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D)	beige fat cell differentiation [GO:0160274]; brown fat cell differentiation [GO:0050873]; chromatin organization [GO:0006325]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; epigenetic regulation of gene expression [GO:0040029]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of white fat cell differentiation [GO:0160275]; peptidyl-lysine dimethylation [GO:0018027]; peptidyl-lysine monomethylation [GO:0018026]; positive regulation of cold-induced thermogenesis [GO:0120162]; regulation of embryonic development [GO:0045995]; response to fungicide [GO:0060992]	hit with GO BP
GN006933	Chromosome_2A	1080	1	58	42.77777777777778	1.174969987995198	0.6843455945252352	58	0	0.6843455945252352	58	0	NA	NA	NA	1.4696485623003195	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006934	Chromosome_2A	8215	9	76	33.39013998782715	0.33499667332002664	78.84504331087584	76	0.9473684210526315	85.52631578947368	6	1	78.3177570093458	70	0.9428571428571428	89.74600188146755	20	0.95	methylated (>=50%)	R9UTQ8	L-proline trans-4-hydroxylase (P4H) (EC 1.14.11.57)	antibiotic metabolic process [GO:0016999]	hit with GO BP
GN006935	Chromosome_2A	621	1	14	42.351046698872786	0.5033580361278369	0.26455026455026454	14	0	0.26455026455026454	14	0	NA	NA	NA	3.299689440993789	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006936	Chromosome_2A	543	1	30	42.7255985267035	1.264751552795031	0.3401360544217687	30	0	0.3401360544217687	30	0	NA	NA	NA	0.7313317936874519	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006937	Chromosome_2A	17500	8	190	34.62285714285714	0.3633821004862435	80.813769035533	189	0.9417989417989417	91.72862453531599	19	1	79.7953520638224	170	0.9352941176470588	15.92356687898089	32	0.21875	methylated (>=50%)	P10155	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Ro60 autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)	cellular response to interferon-alpha [GO:0035457]; regulation of gene expression [GO:0010468]; transcription by RNA polymerase III [GO:0006383]	hit with GO BP
GN006938	Chromosome_2A	2972	3	47	36.27187079407806	0.4824008841000138	75.91666666666667	47	0.7872340425531915	81.01851851851852	8	0.875	74.79674796747967	39	0.7692307692307693	15.661252900232018	19	0.21052631578947367	methylated (>=50%)	Q25532	V-type proton ATPase subunit G (V-ATPase subunit G) (V-ATPase 13 kDa subunit) (Vacuolar proton pump subunit G)	synaptic vesicle lumen acidification [GO:0097401]	hit with GO BP
GN006939	Chromosome_2A	27105	25	309	35.39199409703007	0.36479839415350057	77.91919103866103	309	0.919093851132686	82.86569397680509	54	0.8703703703703703	77.26689689195855	255	0.9294117647058824	5.704099821746881	28	0	methylated (>=50%)	Q9HD20	Endoplasmic reticulum transmembrane helix translocase (EC 7.4.2.-) (Endoplasmic reticulum P5A-ATPase)	extraction of mislocalized protein from ER membrane [GO:0140569]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; transmembrane transport [GO:0055085]	hit with GO BP
GN006940	Chromosome_2A	15344	10	148	34.886600625651724	0.3180372629193115	80.81668625146887	148	0.9121621621621622	76.47867950481431	15	0.9333333333333333	81.14918292040063	133	0.9097744360902256	13.931424766977363	68	0	methylated (>=50%)	A0QYL8	MFS-type efflux pump MSMEG_3705	NA	hit, no GO BP
GN006941	Chromosome_2A	26302	11	293	33.2408181887309	0.40696378535888816	71.58610980760207	293	0.8122866894197952	67.6050753370341	45	0.8222222222222222	72.1205024483713	248	0.8104838709677419	0.8489564909798373	61	0	methylated (>=50%)	P40427	Homeobox protein extradenticle (Dpbx)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; oenocyte development [GO:0007438]; peripheral nervous system development [GO:0007422]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell fate specification [GO:0042659]; regulation of transcription by RNA polymerase II [GO:0006357]; salivary gland boundary specification [GO:0007432]; somatic muscle development [GO:0007525]	hit with GO BP
GN016388	Chromosome_2A	799	2	18	48.06007509386733	0.3901473021729105	85.52338530066815	17	0.8235294117647058	85.52338530066815	17	0.8235294117647058	NA	NA	NA	92.43765084473048	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006942	Chromosome_2A	1351	4	39	40.266469282013325	0.7124082261793696	4.82897384305835	30	0	4.978354978354979	28	0	2.857142857142857	2	0	1.9391408114558473	62	0	unmethylated (<10%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN006943	Chromosome_2A	6596	5	153	37.15888417222559	0.6720446863088246	1.3191990577149588	153	0	0.7161703731624576	57	0	1.593284221346582	96	0	0.5084354055927894	50	0	unmethylated (<10%)	Q9Y6R7	IgGFc-binding protein (Fcgamma-binding protein antigen) (FcgammaBP)	NA	hit, no GO BP
GN006944	Chromosome_2A	4066	6	109	33.07919331037875	0.9806261754618874	0.562258404591777	107	0	0.8138020833333334	43	0	0.42086001829826164	64	0	0.6504621704895583	57	0	unmethylated (<10%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN006945	Chromosome_2A	9104	6	109	37.53295254833041	0.3418050703666478	89.25827814569537	108	0.9907407407407407	92.68605645851154	43	1	87.72064466615502	65	0.9846153846153847	86.62150719729043	25	1	methylated (>=50%)	Q8VHQ2	Suppressor of cytokine signaling 7 (SOCS-7)	cerebral cortex radially oriented cell migration [GO:0021799]; fat cell differentiation [GO:0045444]; insulin receptor signaling pathway [GO:0008286]; intracellular signal transduction [GO:0035556]; layer formation in cerebral cortex [GO:0021819]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; radial glia guided migration of Purkinje cell [GO:0021942]	hit with GO BP
GN006946	Chromosome_2A	240	1	4	44.166666666666664	0.3461954561846376	83.47107438016529	4	1	83.47107438016529	4	1	NA	NA	NA	74.70300489168413	17	0.9411764705882353	NA	NA	NA	NA	no Swiss-Prot hit
GN006947	Chromosome_2A	43047	23	711	36.30682742119079	0.5029226661853643	66.10966703799976	670	0.8134328358208955	78.11816192560175	56	0.9285714285714286	65.60403921279575	614	0.8029315960912052	1.5303891560996938	35	0.02857142857142857	methylated (>=50%)	Q9P2G1	Ankyrin repeat and IBR domain-containing protein 1 (EC 2.3.2.31)	protein ubiquitination [GO:0016567]	hit with GO BP
GN006948	Chromosome_2A	2561	2	75	39.39867239359625	0.7547151277013753	5.342465753424658	20	0	NA	NA	NA	5.342465753424658	20	0	0.19120458891013384	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006949	Chromosome_2A	684	1	11	37.719298245614034	0.4548697176712412	0.42016806722689076	11	0	0.42016806722689076	11	0	NA	NA	NA	0.5232862375719518	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006950	Chromosome_2A	3702	4	111	38.4656942193409	0.8106441405541045	7.8590785907859075	9	0	NA	NA	NA	7.8590785907859075	9	0	0.5792903692976105	19	0	unmethylated (<10%)	P18503	Short-chain collagen C4	NA	hit, no GO BP
GN006951	Chromosome_2A	828	1	7	45.04830917874396	0.16664749856239217	NA	0	NA	NA	NA	NA	NA	NA	NA	20.37037037037037	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006952	Chromosome_2A	207	1	1	51.690821256038646	0.07582417582417582	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006953	Chromosome_2A	828	1	7	45.04830917874396	0.16664749856239217	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006954	Chromosome_2A	3412	3	108	39.33177022274326	0.8185307602089775	19.724770642201836	9	0	NA	NA	NA	19.724770642201836	9	0	1.8987341772151898	16	0	sparse (10-50%)	P18503	Short-chain collagen C4	NA	hit, no GO BP
GN006955	Chromosome_2A	1002	3	22	38.82235528942116	0.5828045685279187	0.49627791563275436	19	0	0.27472527472527475	16	0	2.5641025641025643	3	0	1.589825119236884	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006956	Chromosome_2A	993	1	7	44.71299093655589	0.14127187366623986	NA	0	NA	NA	NA	NA	NA	NA	NA	12.998522895125554	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006957	Chromosome_2A	3419	3	108	39.36823632641123	0.8152554048325562	10.3397341211226	22	0	NA	NA	NA	10.3397341211226	22	0	NA	NA	NA	sparse (10-50%)	P18503	Short-chain collagen C4	NA	hit, no GO BP
GN006958	Chromosome_2A	684	1	11	37.865497076023395	0.4510791366906475	0.8823529411764706	11	0	0.8823529411764706	11	0	NA	NA	NA	0.75	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006959	Chromosome_2A	981	1	28	41.7940876656473	0.6538598871670356	0.39800995024875624	28	0	0.39800995024875624	28	0	NA	NA	NA	1.407035175879397	60	0	unmethylated (<10%)	P35342	Adenosine receptor A3	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; positive regulation of mast cell degranulation [GO:0043306]	hit with GO BP
GN006960	Chromosome_2A	912	1	30	41.44736842105263	0.7661290322580645	0.31347962382445144	30	0	0.31347962382445144	30	0	NA	NA	NA	0.7048092868988391	53	0	unmethylated (<10%)	O02777	Cannabinoid receptor 1 (CB-R) (CB1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]	hit with GO BP
GN018893	Chromosome_2A	490	1	25	41.02040816326531	1.2602880658436213	0.42265426880811496	25	0	0.42265426880811496	25	0	NA	NA	NA	0.7521153243497336	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006961	Chromosome_2A	10041	7	144	35.713574345184746	0.45031393262906116	79.45205479452055	144	0.9166666666666666	89.48365703458077	42	0.9523809523809523	76.04250523265175	102	0.9019607843137255	1.7329910141206675	40	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006962	Chromosome_2A	10081	9	90	33.895446880269816	0.31162394512775243	34.36928702010969	22	0.2727272727272727	34.93723849372385	21	0.2857142857142857	30.434782608695652	1	0	0.40222772277227725	53	0	sparse (10-50%)	Q15058	Kinesin-like protein KIF14	activation of protein kinase activity [GO:0032147]; cell division [GO:0051301]; cell proliferation in forebrain [GO:0021846]; cerebellar cortex development [GO:0021695]; cerebellar granular layer structural organization [GO:0021685]; cerebellar Purkinje cell layer structural organization [GO:0021693]; cerebral cortex development [GO:0021987]; establishment of protein localization [GO:0045184]; hippocampus development [GO:0021766]; microtubule-based movement [GO:0007018]; mitotic metaphase chromosome alignment [GO:0007080]; negative regulation of apoptotic process [GO:0043066]; negative regulation of integrin activation [GO:0033624]; negative regulation of neuron apoptotic process [GO:0043524]; olfactory bulb development [GO:0021772]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cytokinesis [GO:0032467]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of cell adhesion [GO:0030155]; regulation of cell growth [GO:0001558]; regulation of cell maturation [GO:1903429]; regulation of cell migration [GO:0030334]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of G2/M transition of mitotic cell cycle [GO:0010389]; regulation of myelination [GO:0031641]; regulation of neuron apoptotic process [GO:0043523]; regulation of Rap protein signal transduction [GO:0032487]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN006963	Chromosome_2A	16519	20	260	37.2056419880138	0.4581679851848059	63.69426751592356	16	0.6875	NA	NA	NA	63.69426751592356	16	0.6875	NA	NA	NA	methylated (>=50%)	Q15058	Kinesin-like protein KIF14	activation of protein kinase activity [GO:0032147]; cell division [GO:0051301]; cell proliferation in forebrain [GO:0021846]; cerebellar cortex development [GO:0021695]; cerebellar granular layer structural organization [GO:0021685]; cerebellar Purkinje cell layer structural organization [GO:0021693]; cerebral cortex development [GO:0021987]; establishment of protein localization [GO:0045184]; hippocampus development [GO:0021766]; microtubule-based movement [GO:0007018]; mitotic metaphase chromosome alignment [GO:0007080]; negative regulation of apoptotic process [GO:0043066]; negative regulation of integrin activation [GO:0033624]; negative regulation of neuron apoptotic process [GO:0043524]; olfactory bulb development [GO:0021772]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cytokinesis [GO:0032467]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of cell adhesion [GO:0030155]; regulation of cell growth [GO:0001558]; regulation of cell maturation [GO:1903429]; regulation of cell migration [GO:0030334]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of G2/M transition of mitotic cell cycle [GO:0010389]; regulation of myelination [GO:0031641]; regulation of neuron apoptotic process [GO:0043523]; regulation of Rap protein signal transduction [GO:0032487]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN011194	Chromosome_2A	333	1	17	48.648648648648646	0.8693181818181818	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006964	Chromosome_2A	381	1	27	49.86876640419948	1.143	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006965	Chromosome_2A	381	1	27	49.86876640419948	1.143	NA	0	NA	NA	NA	NA	NA	NA	NA	0.37037037037037035	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006966	Chromosome_2A	312	1	6	45.833333333333336	0.3676355066771406	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006967	Chromosome_2A	246	1	14	52.03252032520325	0.8510007412898444	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006968	Chromosome_2A	1170	4	11	39.914529914529915	0.2453671928620453	NA	0	NA	NA	NA	NA	NA	NA	NA	62.5	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN006969	Chromosome_2A	18108	17	186	35.7411089021427	0.3218918488849004	90.55957971822016	186	1	94.0754039497307	42	1	89.80164489598452	144	1	81.1930405965203	27	0.9259259259259259	methylated (>=50%)	Q64521	Glycerol-3-phosphate dehydrogenase, mitochondrial (GPD-M) (GPDH-M) (EC 1.1.5.3) (Protein TISP38)	camera-type eye development [GO:0043010]; gluconeogenesis [GO:0006094]; glycerol catabolic process [GO:0019563]; glycerol-3-phosphate metabolic process [GO:0006072]; glycerol-3-phosphate shuttle [GO:0006127]; multicellular organism growth [GO:0035264]	hit with GO BP
GN006970	Chromosome_2A	21033	12	243	36.390434079779396	0.34996641060760614	88.48326550446455	242	0.9462809917355371	85.7	65	0.9230769230769231	89.3765546016208	177	0.9548022598870056	0.7656065959952886	33	0	methylated (>=50%)	Q8K3W3	Protein CASC3 (Cancer susceptibility candidate gene 3 protein homolog) (Metastatic lymph node gene 51 protein homolog) (MLN 51 homolog) (Protein barentsz) (Btz) (mBtz)	intracellular mRNA localization [GO:0008298]; mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]; regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:2000622]; regulation of RNA helicase activity [GO:1902280]	hit with GO BP
GN006971	Chromosome_2A	366	1	0	41.80327868852459	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7430997876857749	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006972	Chromosome_2A	4000	5	115	36.275	0.8765410926275272	1.2831479897348161	115	0	0.8159564823209429	21	0	1.3703265098968025	94	0	0.8880118401578688	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006973	Chromosome_2A	18023	12	223	34.75004161349387	0.4151422376884168	88.97840362873197	223	0.9596412556053812	67.88543570993296	23	0.7391304347826086	91.61462300076161	200	0.985	0.6554798112218144	56	0	methylated (>=50%)	P10881	Lupus La protein homolog (La autoantigen homolog) (La ribonucleoprotein)	positive regulation of translation [GO:0045727]; tRNA processing [GO:0008033]	hit with GO BP
GN006974	Chromosome_2A	243	1	8	42.79835390946502	0.7668639053254438	0.847457627118644	8	0	0.847457627118644	8	0	NA	NA	NA	0.6489994591671173	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006975	Chromosome_2A	2149	4	65	39.08794788273616	0.7918830358965055	37.05564142194745	65	0.16923076923076924	27.53525856279382	48	0.10416666666666667	49.95450409463148	17	0.35294117647058826	7.6173913043478265	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006976	Chromosome_2A	2823	6	55	40.55968827488488	0.4812269870197493	82.875	55	0.9636363636363636	79.59576515880654	20	0.95	85.37839823659074	35	0.9714285714285714	33.55393778954335	31	0.41935483870967744	methylated (>=50%)	Q9BY79	Membrane frizzled-related protein (Membrane-type frizzled-related protein)	embryo development ending in birth or egg hatching [GO:0009792]	hit with GO BP
GN006977	Chromosome_2A	1566	5	12	36.90932311621967	0.225215723873442	45.47069271758437	12	0.5833333333333334	54.23197492163009	8	0.75	34.01639344262295	4	0.25	47.861111111111114	69	0.5507246376811594	sparse (10-50%)	A7RR34	Protein Flattop homolog (Cilia- and flagella-associated protein 126)	cilium organization [GO:0044782]	hit with GO BP
GN006978	Chromosome_2A	12453	6	247	34.8349795230065	0.6539355195878275	86.63166825750345	246	0.9024390243902439	47.473404255319146	13	0.46153846153846156	88.25803601016237	233	0.927038626609442	22.819383259911895	23	0.30434782608695654	methylated (>=50%)	Q6DGL7	BOS complex subunit TMEM147 (Transmembrane protein 147)	multi-pass transmembrane protein insertion into ER membrane [GO:0160063]; protein localization to nuclear inner membrane [GO:0036228]	hit with GO BP
GN006979	Chromosome_2A	1475	4	53	40.40677966101695	0.8811131273739616	0.6753497346840328	53	0	0.9153318077803204	36	0	0.26246719160104987	17	0	0.6128334534967556	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006980	Chromosome_2A	348	1	3	39.6551724137931	0.23529411764705882	14.285714285714286	1	0	14.285714285714286	1	0	NA	NA	NA	4.375	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006981	Chromosome_2A	570	1	15	43.1578947368421	0.5696961620469083	0.5899705014749262	15	0	0.5899705014749262	15	0	NA	NA	NA	2.0390824129141887	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003135	Chromosome_2A	165	1	10	45.45454545454545	1.1785714285714286	0.5037783375314862	10	0	0.5037783375314862	10	0	NA	NA	NA	0.7895775759968416	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002839	Chromosome_2A	848	2	20	34.08018867924528	0.8427747962631683	1.5792798483891346	20	0	1.554907677356657	11	0	1.6245487364620939	9	0	1.2244897959183674	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006982	Chromosome_2A	456	1	15	51.09649122807018	0.5040530582166544	0.33112582781456956	15	0	0.33112582781456956	15	0	NA	NA	NA	0.533689126084056	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006983	Chromosome_2A	633	1	22	50.71090047393365	0.5417833800186741	0.3303964757709251	22	0	0.3303964757709251	22	0	NA	NA	NA	0.44280442804428044	50	0	unmethylated (<10%)	E8XYF5	3'-5' ssDNA/RNA exonuclease TatD (EC 3.1.11.-) (EC 3.1.13.-) (DNase TatD)	DNA metabolic process [GO:0006259]	hit with GO BP
GN006984	Chromosome_2A	648	1	11	54.01234567901235	0.24770642201834864	30.917874396135264	10	0.1	30.917874396135264	10	0.1	NA	NA	NA	7.505890272635476	63	0.031746031746031744	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN006985	Chromosome_2A	393	1	18	40.966921119592875	1.0936920222634507	0.4132231404958678	18	0	0.4132231404958678	18	0	NA	NA	NA	1.3266998341625207	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006986	Chromosome_2A	516	1	15	47.093023255813954	0.5247457627118645	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN006987	Chromosome_2A	4284	4	111	35.83099906629318	0.8088050699568319	1.0985511861168604	111	0	0.9950248756218906	34	0	1.1341750481489408	77	0	0.4892966360856269	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006988	Chromosome_2A	7392	9	169	34.03679653679654	0.7893902744182167	0.6815968841285297	169	0	0.852017937219731	42	0	0.6274062455439897	127	0	0.6184586108468125	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006989	Chromosome_2A	639	1	14	43.66197183098591	0.46070656092285506	0	11	0	0	11	0	NA	NA	NA	1.5377855887521967	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006990	Chromosome_2A	2544	2	79	37.735849056603776	0.8723863266413456	1.9122333905368962	79	0	0.6165228113440198	15	0	2.233782129742962	64	0	4.067226890756302	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006991	Chromosome_2A	7044	5	169	33.14877910278251	0.8744628430642296	1.0661838664252665	169	0	0.9389671361502347	40	0	1.0965732087227413	129	0	0.8251833740831296	52	0	unmethylated (<10%)	O57460	Dorsal-ventral patterning tolloid-like protein 1 (EC 3.4.24.-) (Mini fin protein)	blood vessel development [GO:0001568]; determination of ventral identity [GO:0048264]; dorsal/ventral pattern formation [GO:0009953]; embryonic caudal fin morphogenesis [GO:0035124]; embryonic hemopoiesis [GO:0035162]; endothelial cell development [GO:0001885]; mesoderm formation [GO:0001707]; positive regulation of BMP signaling pathway [GO:0030513]; post-anal tail morphogenesis [GO:0036342]; protein processing [GO:0016485]; proteolysis [GO:0006508]	hit with GO BP
GN006992	Chromosome_2A	18471	19	213	34.7409452655514	0.38612784238012665	83.03889548693587	212	0.8867924528301887	87.75944651410325	41	0.9024390243902439	82.27378590528767	171	0.8830409356725146	1.017293997965412	50	0	methylated (>=50%)	Q91WJ8	Far upstream element-binding protein 1 (FBP) (FUSE-binding protein 1)	hematopoietic stem cell proliferation [GO:0071425]; positive regulation of gene expression [GO:0010628]; positive regulation of Schwann cell migration [GO:1900149]; regulation of transcription by RNA polymerase II [GO:0006357]; somatic stem cell division [GO:0048103]	hit with GO BP
GN006993	Chromosome_2A	36407	7	401	33.73252396517153	0.38995760289550163	58.3388616160276	364	0.6401098901098901	73.36485421591804	25	0.84	57.44541280104957	339	0.6253687315634219	0.92	66	0	methylated (>=50%)	Q76KB1	Heparan sulfate 2-O-sulfotransferase 1 (EC 2.8.2.-) (2-O-sulfotransferase) (2-OST) (2OST) (HS 2-O-sulfotransferase) (cHS2ST) (Heparan sulfate 2-sulfotransferase)	heparan sulfate proteoglycan biosynthetic process [GO:0015012]	hit with GO BP
GN006994	Chromosome_2A	1437	1	69	46.207376478775224	0.900375939849624	0.6067961165048543	65	0	0.6067961165048543	65	0	NA	NA	NA	0.7319304666056725	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006995	Chromosome_2A	9451	10	95	35.06507247910274	0.32793139279850836	72.00815116709893	93	0.7526881720430108	77.94649313087491	28	0.75	69.9626400996264	65	0.7538461538461538	4.125347084490282	51	0	methylated (>=50%)	A2AGA4	Rhomboid-related protein 2 (RRP2) (EC 3.4.21.105) [Cleaved into: Rhomboid-related protein 2, N-terminal fragment (NTF); Rhomboid-related protein 2, C-terminal fragment (CTF)]	NA	hit, no GO BP
GN006996	Chromosome_2A	36112	19	364	34.76960567124502	0.3346052630607623	66.16694889929276	356	0.6825842696629213	68.29652996845427	45	0.7333333333333333	65.85908106259264	311	0.6752411575562701	43.61036639857015	18	0.16666666666666666	methylated (>=50%)	Q5ZJK0	Ras-specific guanine nucleotide-releasing factor RalGPS1 (Ral GEF with PH domain and SH3-binding motif 1) (RalA exchange factor RalGPS1)	regulation of Ral protein signal transduction [GO:0032485]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN006997	Chromosome_2A	4380	9	112	35.50228310502283	0.8116532869178485	0.586781964175417	112	0	0.48053820278712156	33	0	0.6370875995449374	79	0	0.4315659679408138	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006998	Chromosome_2A	3284	5	34	32.095006090133985	0.4046020328664867	76.00477516912058	34	0.8529411764705882	75.42134831460675	9	0.7777777777777778	76.23542476402	25	0.88	83.12829525483303	19	0.8947368421052632	methylated (>=50%)	Q9VMY1	Large ribosomal subunit protein uL24m (39S ribosomal protein L24, mitochondrial) (L24mt) (MRP-L24)	mitochondrial translation [GO:0032543]	hit with GO BP
GN006999	Chromosome_2A	846	1	28	40.8983451536643	0.7927710843373494	0.5161290322580645	28	0	0.5161290322580645	28	0	NA	NA	NA	0.8375819373634378	78	0	unmethylated (<10%)	Q6ZFH6	Beta-1,2-xylosyltransferase RCN11 (OsXylT) (EC 2.4.2.-) (Protein REDUCED CULM NUMBER 11)	shoot system development [GO:0048367]	hit with GO BP
GN007000	Chromosome_2A	4239	6	91	32.38971455531965	0.8189826118341437	3.0440076535049574	91	0	0.7782101167315175	13	0	3.2664756446991405	78	0	0.19392372333548805	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007001	Chromosome_2A	4571	8	110	35.85648654561365	0.7489647570530581	0.1349527665317139	38	0	0	11	0	0.17825311942959002	27	0	0	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007002	Chromosome_2A	1020	1	37	40.68627450980392	0.878368942885072	0	2	0	0	2	0	NA	NA	NA	0.5494505494505495	11	0	NA	Q6ZFH6	Beta-1,2-xylosyltransferase RCN11 (OsXylT) (EC 2.4.2.-) (Protein REDUCED CULM NUMBER 11)	shoot system development [GO:0048367]	hit with GO BP
GN007003	Chromosome_2A	2377	4	59	36.979385780395454	0.7263164981769971	0.954653937947494	24	0	0.9404388714733543	18	0	1	6	0	0.27472527472527475	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007004	Chromosome_2A	622	2	17	43.569131832797424	0.5768685215493726	0.7923930269413629	17	0	0.8042895442359249	11	0	0.7751937984496124	6	0	1.1154219204655673	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007005	Chromosome_2A	222	1	8	47.2972972972973	0.6543846720707442	0.6535947712418301	8	0	0.6535947712418301	8	0	NA	NA	NA	0.7417709782104775	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007006	Chromosome_2A	666	1	30	40.090090090090094	1.1363894892503696	0.2304147465437788	17	0	0.2304147465437788	17	0	NA	NA	NA	0.3401360544217687	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007007	Chromosome_2A	4509	5	152	38.05721889554225	0.9316115702479338	1.0159211523881728	141	0	0.5152868430092752	53	0	1.4115092290988056	88	0	0.5326231691078562	43	0	unmethylated (<10%)	Q8CDF7	piRNA biogenesis protein EXD1 (Exonuclease 3'-5' domain-containing protein 1) (Exonuclease 3'-5' domain-like-containing protein 1) (Inactive exonuclease EXD1) (mExd1)	piRNA processing [GO:0034587]; regulatory ncRNA-mediated gene silencing [GO:0031047]	hit with GO BP
GN007008	Chromosome_2A	4121	5	137	37.51516622179083	0.94516291582752	0.5772230889235569	136	0	0.5912786400591279	53	0	0.5669546436285097	83	0	1.1846001974333662	40	0	unmethylated (<10%)	H9IUR0	piRNA biogenesis protein EXD1 (Exonuclease 3'-5' domain-containing protein 1) (Exonuclease 3'-5' domain-like-containing protein 1) (Inactive exonuclease EXD1) (BmExd1)	piRNA processing [GO:0034587]; regulatory ncRNA-mediated gene silencing [GO:0031047]	hit with GO BP
GN007009	Chromosome_2A	966	2	33	36.95652173913044	1.0125786163522013	0.8419441255262151	33	0	0.8613938919342208	32	0	0	1	0	3.7748798901853124	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007010	Chromosome_2A	5590	8	150	37.978533094812164	0.7442140354240555	0.44027003228646905	150	0	0.5021520803443329	26	0	0.42435424354243545	124	0	0.7401924500370096	71	0	unmethylated (<10%)	Q6PCJ9	Lysosomal thioesterase PPT2-A (PPT-2-A) (EC 3.1.2.2)	NA	hit, no GO BP
GN007011	Chromosome_2A	15769	5	360	37.46591413532881	0.6511222569540543	88.78448791321432	190	0.8842105263157894	89.35064935064935	15	1	88.74462832586633	175	0.8742857142857143	89.67952199891363	32	0.96875	methylated (>=50%)	F1NV61	Caspase-7 (CASP-7) (EC 3.4.22.60) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	apoptotic process [GO:0006915]; defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; lymphocyte apoptotic process [GO:0070227]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; proteolysis [GO:0006508]	hit with GO BP
GN007012	Chromosome_2A	468	1	20	39.957264957264954	1.0743801652892562	0.6255585344057194	20	0	0.6255585344057194	20	0	NA	NA	NA	0.37779715199070035	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007013	Chromosome_2A	1043	2	36	47.26749760306807	0.6231412639405205	0.24213075060532688	15	0	0.24213075060532688	15	0	NA	NA	NA	0.49159120310478654	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007014	Chromosome_2A	2909	4	90	40.52939154348574	0.7544869799771761	0.5194162750432847	84	0	0.5311077389984825	48	0	0.5137614678899083	36	0	0.5983138428066358	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007015	Chromosome_2A	16838	7	380	34.404323553866256	0.7626532979089862	1.1374448577112706	372	0	0.4878048780487805	44	0	1.200645406226272	328	0	0.43358297201419	36	0	unmethylated (<10%)	Q95M17	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]; positive regulation of chemokine production [GO:0032722]; production of molecular mediator involved in inflammatory response [GO:0002532]	hit with GO BP
GN007016	Chromosome_2A	3168	3	127	37.21590909090909	1.1610825411666927	1.0196078431372548	127	0	0.9935710111046172	54	0	1.0291595197255574	73	0	47.43892828999212	22	0.5	unmethylated (<10%)	Q9UBQ7	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)	dicarboxylic acid metabolic process [GO:0043648]; glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN007017	Chromosome_2A	8445	6	100	35.22794552989935	0.3833147992646892	63.30555229487029	100	0.7	38.13038130381304	14	0.5	65.9615883726966	86	0.7325581395348837	0.5108556832694764	41	0	methylated (>=50%)	Q9VCA8	Ankyrin repeat and KH domain-containing protein mask (Multiple ankyrin repeat single KH domain-containing protein)	compound eye photoreceptor cell differentiation [GO:0001751]; dorsal appendage formation [GO:0046843]; flight [GO:0060361]; innate immune response [GO:0045087]; negative regulation of establishment of blood-brain barrier [GO:0090212]; negative regulation of type 2 mitophagy [GO:1905090]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; positive regulation of sevenless signaling pathway [GO:0045874]; positive regulation of transcription by RNA polymerase II [GO:0045944]; sarcomere organization [GO:0045214]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]; wound healing, spreading of cells [GO:0044319]; wound healing, spreading of epidermal cells [GO:0035313]	hit with GO BP
GN007018	Chromosome_2A	7953	2	200	35.3200050295486	0.806494138644384	2.269849001461276	200	0	1.2506012506012505	51	0	2.528707549474713	149	0	1.543859649122807	66	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN007019	Chromosome_2A	447	1	16	42.05816554809844	0.8402255639097744	2.4193548387096775	7	0	2.4193548387096775	7	0	NA	NA	NA	0.8830022075055187	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007020	Chromosome_2A	612	1	21	41.666666666666664	0.7906003937007874	1.0067114093959733	15	0	1.0067114093959733	15	0	NA	NA	NA	5.585045003461805	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002529	Chromosome_2A	406	1	11	41.13300492610838	0.6411139821992535	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4608294930875576	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007021	Chromosome_2A	1053	1	32	40.36087369420703	0.7477033683930235	0.5010737294201861	32	0	0.5010737294201861	32	0	NA	NA	NA	0.4434589800443459	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007022	Chromosome_2A	717	1	4	39.33054393305439	0.14437452806443493	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007023	Chromosome_2A	717	1	4	39.33054393305439	0.14437452806443493	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007024	Chromosome_2A	26834	7	583	36.97175225460237	0.6397185834302807	1.0114370185948807	564	0	0.6773448083512631	260	0	1.3300904461503382	304	0	0.5840071877807727	42	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN007025	Chromosome_2A	10279	3	174	36.79346239906606	0.5040065872826219	0.9152642456451137	172	0	0.5478569126651628	73	0	1.4917825537294565	99	0	0.6044325050369376	19	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN007026	Chromosome_2A	8397	3	66	35.47695605573419	0.251308003101661	0.5565862708719852	66	0	0.41993281075027994	44	0	0.9382329945269742	22	0	0.682261208576998	25	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN007027	Chromosome_2A	843	1	2	50.88967971530249	0.04318868794507915	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8739076154806492	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007028	Chromosome_2A	198	1	10	49.494949494949495	0.8301886792452831	0.6872852233676976	10	0	0.6872852233676976	10	0	NA	NA	NA	0.4592016955139527	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007029	Chromosome_2A	980	2	8	33.87755102040816	0.28685375580842265	1.2658227848101267	6	0	1.2658227848101267	6	0	NA	NA	NA	3.3572068039391225	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007030	Chromosome_2A	2989	2	119	39.81264637002342	1.0107470965505287	0.6000774293457221	119	0	0.7035175879396985	50	0	0.535264483627204	69	0	3.3399470899470898	84	0	unmethylated (<10%)	Q9BX70	BTB/POZ domain-containing protein 2	neurogenesis [GO:0022008]	hit with GO BP
GN007031	Chromosome_2A	414	1	23	50	0.9929092805005214	0.814663951120163	23	0	0.814663951120163	23	0	NA	NA	NA	1.9215686274509804	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007032	Chromosome_2A	1371	1	11	40.26258205689278	0.2014022435897436	82.58196721311475	11	0.9090909090909091	82.58196721311475	11	0.9090909090909091	NA	NA	NA	89.62818003913894	14	0.9285714285714286	methylated (>=50%)	Q21920	Ankyrin repeat and KH domain-containing protein mask-1 (Multiple ankyrin repeats single KH domain homolog)	NA	hit, no GO BP
GN007033	Chromosome_2A	4642	6	124	34.59715639810427	0.8928792473610325	0.5994861547245218	124	0	0.9078212290502793	29	0	0.5202726946537496	95	0	0.5607476635514018	58	0	unmethylated (<10%)	Q9TU53	Cubilin	NA	hit, no GO BP
GN007034	Chromosome_2A	4842	5	153	36.30731102850062	0.9600954877873349	0.6086956521739131	153	0	0.6802721088435374	27	0	0.5927051671732523	126	0	1.0827318156579677	57	0	unmethylated (<10%)	Q9UHJ9	Acyltransferase PGAP2 (EC 2.3.-.-) (FGF receptor-activating protein 1) (Post-GPI attachment to proteins factor 2)	GPI anchor biosynthetic process [GO:0006506]; GPI anchor remodelling [GO:0120574]	hit with GO BP
GN001545	Chromosome_2A	388	1	20	56.18556701030928	0.6783216783216783	75.86837294332724	20	1	75.86837294332724	20	1	NA	NA	NA	22.43966079582518	45	0.3111111111111111	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007035	Chromosome_2A	5386	4	147	35.75937616041589	0.8623203322322097	1.8538379040907003	147	0	1.4908890115958033	95	0	2.306368330464716	52	0	5.35	49	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007036	Chromosome_2A	22033	20	312	35.91431035265284	0.44106968588130896	86.57215987399094	312	0.9903846153846154	86.62155127537741	40	1	86.56700190269095	272	0.9889705882352942	7.605633802816901	40	0.05	methylated (>=50%)	Q8NEN9	PDZ domain-containing protein 8 (Lysosomal vacuolator) (LYVAC) (Sarcoma antigen NY-SAR-84/NY-SAR-104)	lipophagy [GO:0061724]; lysosome organization [GO:0007040]; mitochondrial calcium ion homeostasis [GO:0051560]; mitochondrion-endoplasmic reticulum membrane tethering [GO:1990456]; neuron projection development [GO:0031175]; organelle localization by membrane tethering [GO:0140056]; response to osmotic stress [GO:0006970]	hit with GO BP
GN007037	Chromosome_2A	267	1	12	52.80898876404494	0.7041758241758241	11.663066954643629	12	0	11.663066954643629	12	0	NA	NA	NA	0.6770098730606487	79	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007038	Chromosome_2A	1442	2	43	36.9625520110957	0.8732993436804597	0.48055919615552645	43	0	0.6993006993006993	15	0	0.3494060097833683	28	0	0.46174142480211083	51	0	unmethylated (<10%)	Q9R0Y1	Bile acid-sensitive ion channel (BASIC) (Acid-sensing ion channel subunit family member 5) (Amiloride-sensitive cation channel 5) (Brain-liver-intestine amiloride-sensitive Na(+) channel) (BLINaC)	neuronal action potential [GO:0019228]; sodium ion import across plasma membrane [GO:0098719]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN007039	Chromosome_2A	13553	6	194	33.77112078506604	0.5026898382655638	81.85215568316471	172	0.8081395348837209	70.3579418344519	21	0.6190476190476191	82.87188647414905	151	0.8344370860927153	1.8525115781973638	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003166	Chromosome_2A	542	1	13	45.2029520295203	0.4737125184886379	2.9411764705882355	10	0	2.9411764705882355	10	0	NA	NA	NA	3.3003300330033003	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007040	Chromosome_2A	162	1	4	50.617283950617285	0.4007421150278293	0	4	0	0	4	0	NA	NA	NA	0.7455268389662028	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007041	Chromosome_2A	37965	22	453	35.43263532200711	0.3810022636633952	78.92904953145917	413	0.9152542372881356	84.87099296325255	38	0.9736842105263158	78.16340922828934	375	0.9093333333333333	1.1139401654996817	60	0	methylated (>=50%)	Q9H3E2	Sorting nexin-25	negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; receptor catabolic process [GO:0032801]	hit with GO BP
GN007042	Chromosome_2A	3057	3	51	37.35688583578672	0.48009053257171014	3.0240902101486418	51	0	1.9950124688279303	10	0	3.2903225806451615	41	0	1.10438190238689	45	0	unmethylated (<10%)	P42519	Protein Star	behavioral response to ethanol [GO:0048149]; compound eye photoreceptor cell differentiation [GO:0001751]; compound eye retinal cell programmed cell death [GO:0046667]; determination of dorsal identity [GO:0048263]; determination of genital disc primordium [GO:0035225]; dorsal appendage formation [GO:0046843]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; endosomal transport [GO:0016197]; epidermal growth factor receptor ligand maturation [GO:0038004]; epithelial cell proliferation involved in Malpighian tubule morphogenesis [GO:0061331]; imaginal disc-derived wing morphogenesis [GO:0007476]; imaginal disc-derived wing vein specification [GO:0007474]; ommatidial rotation [GO:0016318]; photoreceptor cell fate determination [GO:0043703]; positive regulation of protein secretion [GO:0050714]; regulation of circadian sleep/wake cycle [GO:0042749]; stem cell fate commitment [GO:0048865]; stomatogastric nervous system development [GO:0007421]	hit with GO BP
GN007043	Chromosome_2A	219	1	6	47.48858447488585	0.49772727272727274	0	3	0	0	3	0	NA	NA	NA	0.5094614264919942	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007044	Chromosome_2A	6084	8	114	33.92504930966469	0.6649052841475573	85.8465991316932	113	0.9911504424778761	94.61235216819973	23	1	84.33789437973539	90	0.9888888888888889	0.6176016469377251	43	0	methylated (>=50%)	Q26481	Large ribosomal subunit protein uL18 (60S ribosomal protein L5)	ribosomal large subunit assembly [GO:0000027]; translation [GO:0006412]	hit with GO BP
GN007045	Chromosome_2A	25937	29	260	33.86667694798936	0.3535953375638876	87.59672149939817	260	0.9846153846153847	88.45671267252196	73	0.9726027397260274	87.3421482692022	187	0.9893048128342246	0.6006006006006006	48	0	methylated (>=50%)	Q5T9S5	Coiled-coil domain-containing protein 18 (Sarcoma antigen NY-SAR-24)	positive regulation of adipose tissue development [GO:1904179]	hit with GO BP
GN007046	Chromosome_2A	2001	1	63	38.430784607696154	0.8527103992207686	0.7169970476592156	63	0	0.7169970476592156	63	0	NA	NA	NA	2.3273855702094646	53	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN007047	Chromosome_2A	1899	1	57	39.02053712480253	0.7885753001515328	0.6821282401091405	57	0	0.6821282401091405	57	0	NA	NA	NA	0.3003003003003003	42	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN007048	Chromosome_2A	585	3	10	34.01709401709402	0.5912674348089751	0.398406374501992	10	0	0.27472527472527475	8	0	0.7246376811594203	2	0	0.47103155911446065	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007049	Chromosome_2A	7376	5	218	34.74783080260303	0.9793122265423256	0.6592827004219409	205	0	0.3814367450731087	28	0	0.7038661634193614	177	0	0.5179669796050502	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007050	Chromosome_2A	537	1	33	44.6927374301676	1.2327652173913044	1.680672268907563	32	0	1.680672268907563	32	0	NA	NA	NA	1.9754938734683671	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007051	Chromosome_2A	3629	6	71	36.290989253237804	0.5942018624516284	0.9259259259259259	65	0	0.45751633986928103	20	0	1.2444444444444445	45	0	1.14300903774588	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007052	Chromosome_2A	651	1	39	45.46850998463902	1.172810421286031	0.5571030640668524	39	0	0.5571030640668524	39	0	NA	NA	NA	0.7291385363219012	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007053	Chromosome_2A	602	4	21	36.87707641196013	1.042639175257732	0.3925967470555244	21	0	0.5057803468208093	17	0	0	4	0	0.958543014617781	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007054	Chromosome_2A	18150	16	141	34.80440771349862	0.2585962291422384	87.97074555179566	140	0.9785714285714285	91.96013289036544	28	1	87.18652037617555	112	0.9732142857142857	87.2713972201902	22	1	methylated (>=50%)	Q9W0E8	Protein zer-1 homolog (Zyg-11 homolog B-like protein)	macroautophagy [GO:0016236]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN007055	Chromosome_2A	1596	1	0	33.27067669172932	0	NA	0	NA	NA	NA	NA	NA	NA	NA	2.2222222222222223	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007056	Chromosome_2A	522	1	19	45.21072796934866	0.722465034965035	1.5695067264573992	19	0	1.5695067264573992	19	0	NA	NA	NA	0.6619144602851323	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007057	Chromosome_2A	4371	4	44	37.61153054221002	0.2847578083936067	68.29268292682927	43	0.7674418604651163	67.52368064952638	29	0.6896551724137931	69.75546975546976	14	0.9285714285714286	84.28300094966761	28	1	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007058	Chromosome_2A	14425	4	365	36.429809358752166	0.7630921178876141	1.2098110705999336	362	0	0.7712944332662642	61	0	1.2962962962962963	301	0	0.6524725274725275	50	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN007059	Chromosome_2A	4917	3	144	37.29916615822656	0.8450631606084043	9.375	3	0	NA	NA	NA	9.375	3	0	NA	NA	NA	NA	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007060	Chromosome_2A	1851	2	59	38.03349540788763	0.8821120480759911	0.7757665312153675	59	0	1.0188087774294672	26	0	0.5590496156533893	33	0	0.5992245329573493	59	0	unmethylated (<10%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN007061	Chromosome_2A	222	1	3	48.648648648648646	0.35200845665961944	0.5555555555555556	3	0	0.5555555555555556	3	0	NA	NA	NA	1.207966046359778	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007062	Chromosome_2A	216	1	3	46.75925925925926	0.43373493975903615	0.6756756756756757	3	0	0.6756756756756757	3	0	NA	NA	NA	0.6252170892671066	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007063	Chromosome_2A	297	1	4	48.484848484848484	0.37606837606837606	0.4854368932038835	4	0	0.4854368932038835	4	0	NA	NA	NA	0.6215722120658135	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007064	Chromosome_2A	228	1	0	46.92982456140351	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6190476190476191	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007065	Chromosome_2A	192	1	1	47.395833333333336	0.16	0	1	0	0	1	0	NA	NA	NA	0.8171603677221655	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007066	Chromosome_2A	270	1	0	44.44444444444444	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0389610389610389	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN006168	Chromosome_2A	430	1	20	47.674418604651166	0.8229665071770335	0.6703910614525139	20	0	0.6703910614525139	20	0	NA	NA	NA	1.4173626929891168	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007067	Chromosome_2A	3300	3	95	37.27272727272727	0.8296635826646624	0.9017341040462428	95	0	0.5424954792043399	12	0	0.9544008483563097	83	0	0.6404098623118796	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007068	Chromosome_2A	582	1	22	43.986254295532646	0.7845588235294118	0.5780346820809249	22	0	0.5780346820809249	22	0	NA	NA	NA	0.4841549295774648	52	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN007069	Chromosome_2A	513	1	17	43.46978557504873	0.7016090104585679	1.5037593984962405	17	0	1.5037593984962405	17	0	NA	NA	NA	0.255863539445629	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007070	Chromosome_2A	11294	6	272	34.8680715424119	0.7924311716572896	0.6762791884649738	272	0	0.6996501749125438	36	0	0.6728589190375192	236	0	0.9534286762009534	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007071	Chromosome_2A	7683	5	198	35.88442014837954	0.8042389189646422	0.47216925451738856	197	0	0.49382716049382713	46	0	0.4660375160200396	151	0	0.36600244001626675	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007072	Chromosome_2A	11970	18	435	36.49958228905597	1.0951053557412507	0.663764185282992	338	0	0.647985989492119	113	0	0.6746175159619323	225	0	0.6493506493506493	50	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN007073	Chromosome_2A	21464	9	234	34.87700335445397	0.3604723066720638	86.61681986555082	232	0.978448275862069	89.51647411210955	40	1	86.0632301282575	192	0.9739583333333334	50.768105340160936	19	0.42105263157894735	methylated (>=50%)	Q9BQA5	Histone H4 transcription factor (Histone nuclear factor P) (HiNF-P) (MBD2-interacting zinc finger protein) (Methyl-CpG-binding protein 2-interacting zinc finger protein)	cell cycle G1/S phase transition [GO:0044843]; DNA damage checkpoint signaling [GO:0000077]; DNA repair [GO:0006281]; DNA-templated transcription [GO:0006351]; establishment of protein localization [GO:0045184]; G1/S transition of mitotic cell cycle [GO:0000082]; in utero embryonic development [GO:0001701]; myoblast differentiation [GO:0045445]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007074	Chromosome_2A	9113	3	87	34.53308460441128	0.32022629840466654	81.31891433418151	87	0.9655172413793104	77.9494382022472	11	0.9090909090909091	81.91808191808192	76	0.9736842105263158	39.91272239006378	38	0.42105263157894735	methylated (>=50%)	Q3TYE7	TLC domain-containing protein 5 (Transmembrane protein 136)	NA	hit, no GO BP
GN007075	Chromosome_2A	521	2	17	37.04414587332054	0.9625081504020865	0.8316008316008316	17	0	0.8565310492505354	16	0	0	1	0	0.8287946957139475	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007076	Chromosome_2A	521	2	16	36.660268714011515	0.9299419901829541	0.20408163265306123	16	0	0.2109704641350211	15	0	0	1	0	4.440816326530612	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007077	Chromosome_2A	521	2	16	36.85220729366603	0.9188712522045855	0.28530670470756064	16	0	0.29411764705882354	15	0	0	1	0	5.408320493066256	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007078	Chromosome_2A	1098	4	25	37.704918032786885	0.6407563025210085	0.717948717948718	25	0	0.6648936170212766	20	0	0.8968609865470852	5	0	0.5851755526657998	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007079	Chromosome_2A	531	2	29	45.00941619585687	1.079873772791024	6.670984455958549	29	0	7.9930495221546485	23	0	2.7989821882951653	6	0	1.6299685444666858	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007080	Chromosome_2A	2461	6	62	36.976838683462006	0.7373782771535581	0.6157635467980296	27	0	0.425531914893617	13	0	0.8771929824561403	14	0	0.43358297201419	40	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN007081	Chromosome_2A	2461	6	62	36.89557090613572	0.7407900102926611	0.5698005698005698	28	0	1.1627906976744187	13	0	0.22522522522522523	15	0	0.8155432957543776	41	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN007082	Chromosome_2A	4680	7	127	39.31623931623932	0.7065486153377967	0.5309264666843642	114	0	0.39254170755642787	28	0	0.5822416302765647	86	0	0.3411675511751327	45	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN007083	Chromosome_2A	673	2	6	39.673105497771175	0.22927549398137634	1.6194331983805668	6	0	2.6490066225165565	4	0	0	2	0	3.7227214377406934	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007084	Chromosome_2A	17229	6	484	38.02890475361309	0.7778550870101989	17.22328244274809	375	0.13866666666666666	1.1363636363636365	36	0	18.930940892641736	339	0.15339233038348082	0.6059075990911386	66	0	sparse (10-50%)	P35003	Chymotrypsin-like serine proteinase (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN007085	Chromosome_2A	28445	6	636	35.3278256284057	0.723957661789412	1.7281292059219382	632	0	1.1203677104280378	62	0	1.7909649826249665	570	0	0.5268996117581808	50	0	unmethylated (<10%)	O88854	Galanin receptor type 2 (GAL2-R) (GALR-2)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; G protein-coupled receptor signaling pathway [GO:0007186]; galanin-activated signaling pathway [GO:0090663]; inositol phosphate metabolic process [GO:0043647]; neuron projection development [GO:0031175]; phosphatidylinositol metabolic process [GO:0046488]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN007086	Chromosome_2A	5698	9	180	35.8020358020358	0.9861923076923077	0.4676347526458282	180	0	0.45392646391284613	70	0	0.47273341212223535	110	0	0.3865073787772312	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007087	Chromosome_2A	1137	1	44	42.919964819700965	0.8465690836788222	0.5542359461599367	44	0	0.5542359461599367	44	0	NA	NA	NA	0.6521739130434783	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007088	Chromosome_2A	24716	23	282	34.35021848195501	0.38852604012995107	88.83889376646181	282	0.9822695035460993	92.86997126436782	100	0.99	87.06542351453857	182	0.978021978021978	46.829268292682926	18	0.5	methylated (>=50%)	P23347	Anion exchange protein 2 (AE 2) (Anion exchanger 2) (Band 3-related protein 2) (B3RP-2) (Non-erythroid band 3-like protein) (Solute carrier family 4 member 2)	amelogenesis [GO:0097186]; bicarbonate transport [GO:0015701]; chloride transport [GO:0006821]; digestive tract development [GO:0048565]; negative regulation of CD8-positive, alpha-beta T cell differentiation [GO:0043377]; negative regulation of CD8-positive, alpha-beta T cell proliferation [GO:2000565]; osteoclast differentiation [GO:0030316]; positive regulation of enamel mineralization [GO:0070175]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of bone resorption [GO:0045124]; regulation of intracellular pH [GO:0051453]; spermatogenesis [GO:0007283]	hit with GO BP
GN007089	Chromosome_2A	1437	2	26	39.38761308281141	0.4673463005816499	83.37754199823165	26	1	83.37754199823165	26	1	NA	NA	NA	46.15384615384615	12	0.4166666666666667	methylated (>=50%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN007090	Chromosome_2A	45481	33	476	36.39981530749104	0.31784408104818845	64.46056577774175	454	0.7026431718061674	82.93089092422981	215	0.9488372093023256	50.06130544536603	239	0.4811715481171548	7.339449541284404	16	0	methylated (>=50%)	O46385	Supervillin (Archvillin) (p205/p250)	actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; positive regulation of cytokinesis [GO:0032467]	hit with GO BP
GN007091	Chromosome_2A	2086	7	78	39.98082454458294	0.935721885153981	0.6390977443609023	78	0	0.7649513212795549	45	0	0.4909983633387889	33	0	0.989522700814901	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007092	Chromosome_2A	2682	2	85	37.73303504847129	0.8906643745970971	0.4997223764575236	72	0	0.572737686139748	38	0	0.47636496885305973	34	0	0.41511000415110005	45	0	unmethylated (<10%)	P41340	Actin-3 (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN007093	Chromosome_2A	3919	2	131	36.05511610104619	1.0287284691775607	1.1275872721655855	109	0	0.573394495412844	29	0	1.2138521956444126	80	0	0.7188498402555911	38	0	unmethylated (<10%)	P41340	Actin-3 (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN007094	Chromosome_2A	2808	2	98	37.89173789173789	0.9778270509977827	0.3449267030755964	90	0	0.4472271914132379	47	0	0.29648454044896233	43	0	0.5340453938584779	36	0	unmethylated (<10%)	P41340	Actin-3 (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN007095	Chromosome_2A	378	1	14	47.08994708994709	0.6826625386996904	0.5235602094240838	9	0	0.5235602094240838	9	0	NA	NA	NA	0.5531914893617021	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007096	Chromosome_2A	234	1	12	64.52991452991454	0.5043103448275862	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6369426751592356	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007097	Chromosome_2A	3066	1	26	37.11676451402479	0.2485408560311284	93.5251798561151	22	1	93.5251798561151	22	1	NA	NA	NA	90.04780530204259	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007098	Chromosome_2A	12188	15	152	35.53495241220873	0.39542980869880007	83.90035751355092	152	0.9078947368421053	93.20255474452554	44	0.9772727272727273	80.75320265473067	108	0.8796296296296297	75.69169960474308	7	1	methylated (>=50%)	P38606	V-type proton ATPase catalytic subunit A (V-ATPase subunit A) (EC 7.1.2.2) (V-ATPase 69 kDa subunit) (Vacuolar ATPase isoform VA68) (Vacuolar proton pump subunit alpha)	ATP metabolic process [GO:0046034]; cellular response to amino acid stimulus [GO:0071230]; cellular response to increased oxygen levels [GO:0036295]; endosomal lumen acidification [GO:0048388]; Golgi lumen acidification [GO:0061795]; intracellular iron ion homeostasis [GO:0006879]; intracellular pH reduction [GO:0051452]; lysosomal lumen acidification [GO:0007042]; positive regulation of TORC1 signaling [GO:1904263]; proton transmembrane transport [GO:1902600]; regulation of macroautophagy [GO:0016241]; synaptic vesicle lumen acidification [GO:0097401]; vacuolar acidification [GO:0007035]	hit with GO BP
GN007099	Chromosome_2A	5926	4	67	34.5426932163348	0.3821400659867795	83.54710305174702	63	0.9365079365079365	65.5813953488372	4	0.75	84.44392848850708	59	0.9491525423728814	90.29813036887317	34	1	methylated (>=50%)	Q0P4J9	Polyprenal reductase (EC 1.3.1.94) (3-oxo-5-alpha-steroid 4-dehydrogenase 3) (EC 1.3.1.22) (Steroid 5-alpha-reductase 3) (S5AR 3) (SR type 3)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; dolichyl monophosphate biosynthetic process [GO:0043048]	hit with GO BP
GN007100	Chromosome_2A	402	1	10	44.527363184079604	0.5088607594936709	0.9216589861751152	10	0	0.9216589861751152	10	0	NA	NA	NA	3.3991731740927884	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007101	Chromosome_2A	543	1	14	43.83057090239411	0.5374337221633085	0	14	0	0	14	0	NA	NA	NA	1.5277777777777777	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007102	Chromosome_2A	579	1	28	43.17789291882556	1.0621069182389937	0.7751937984496124	28	0	0.7751937984496124	28	0	NA	NA	NA	0.7157464212678937	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007103	Chromosome_2A	1719	1	102	47.004072134962186	1.074434251888891	0.8985879332477535	81	0	0.8985879332477535	81	0	NA	NA	NA	0.42722001830942935	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007104	Chromosome_2A	7032	11	114	36.39078498293515	0.4921866366067679	1.8813314037626627	114	0	0.9180790960451978	40	0	2.2800350774627303	74	0	0.5640345056403451	55	0	unmethylated (<10%)	P31400	V-type proton ATPase catalytic subunit A (V-ATPase subunit A) (EC 7.1.2.2) (V-ATPase 69 kDa subunit) (Vacuolar proton pump subunit alpha)	ATP metabolic process [GO:0046034]	hit with GO BP
GN007105	Chromosome_2A	2733	2	29	39.40724478594951	0.2756458411585493	18.25726141078838	24	0.125	18.25726141078838	24	0.125	NA	NA	NA	0.8022322985699337	55	0	sparse (10-50%)	Q9Y4A0	Jerky protein homolog-like (Human homolog of mouse jerky gene protein) (HHMJG)	central nervous system development [GO:0007417]	hit with GO BP
GN007106	Chromosome_2A	507	1	22	43.58974358974359	0.9150123051681707	0.6614552014431749	22	0	0.6614552014431749	22	0	NA	NA	NA	0.91324200913242	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007107	Chromosome_2A	435	1	8	41.14942528735632	0.4461538461538462	0.5730659025787965	8	0	0.5730659025787965	8	0	NA	NA	NA	0.6781750924784217	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007108	Chromosome_2A	1014	1	20	42.89940828402367	0.4301166489925769	1.0619469026548674	19	0	1.0619469026548674	19	0	NA	NA	NA	8.597285067873303	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002804	Chromosome_2A	312	1	15	46.47435897435897	0.8924485125858124	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007109	Chromosome_2A	22908	8	634	35.6120132704732	0.8729143478228728	1.1386444341516133	622	0	0.30060120240480964	34	0	1.172219991971096	588	0	1.4242555028053518	76	0	unmethylated (<10%)	Q6V0K7	Oncoprotein-induced transcript 3 protein (Liver-specific zona pellucida domain-containing protein)	renal system process [GO:0003014]	hit with GO BP
GN007110	Chromosome_2A	10406	6	267	36.517393811262735	0.7706275295558632	0.8686403120014182	247	0	0.5208333333333334	23	0	0.9081934846989141	224	0	2.213205459240133	48	0.020833333333333332	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007111	Chromosome_2A	14993	13	243	34.32268391916227	0.5538011766131157	80.00314993700125	242	0.9338842975206612	91.2280701754386	41	1	78.34548412363681	201	0.9203980099502488	92.9355281207133	25	1	methylated (>=50%)	O15213	WD repeat-containing protein 46 (WD repeat-containing protein BING4)	maturation of SSU-rRNA [GO:0030490]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN007112	Chromosome_2A	1292	3	37	39.78328173374613	0.7301330319368289	0.497787610619469	37	0	0.47619047619047616	35	0	0.78125	2	0	0.49196457855034437	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007113	Chromosome_2A	4526	11	147	39.06319045514803	0.8514759238521836	0.5716265373289451	147	0	0.27472527472527475	72	0	0.8738203425375742	75	0	1.7338092809790924	74	0	unmethylated (<10%)	A2AVA0	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)	cell migration [GO:0016477]; epidermis development [GO:0008544]; epithelial cell-cell adhesion [GO:0090136]; gene expression [GO:0010467]; lymph circulation [GO:0003017]; lymph vessel development [GO:0001945]; lymph vessel morphogenesis [GO:0036303]; negative regulation of vasoconstriction [GO:0045906]; positive regulation of platelet activation [GO:0010572]; Tie signaling pathway [GO:0048014]; tight junction organization [GO:0120193]	hit with GO BP
GN007114	Chromosome_2A	7381	3	175	36.83782685272998	0.700698705117147	0.48998257839721254	175	0	0.49358341559723595	25	0	0.48953616448415127	150	0	1.440443213296399	58	0	unmethylated (<10%)	Q93T20	Quinone reductase (EC 1.6.5.2) (Chromate reductase) (CHRR) (EC 1.6.-.-) (NAD(P)H dehydrogenase (quinone))	NA	hit, no GO BP
GN007115	Chromosome_2A	23816	9	527	35.669297950957336	0.6959412605115918	2.2234397114550517	524	0	0	8	0	2.26754202169763	516	0	1.0370961308336657	51	0	unmethylated (<10%)	R9UTQ8	L-proline trans-4-hydroxylase (P4H) (EC 1.14.11.57)	antibiotic metabolic process [GO:0016999]	hit with GO BP
GN007116	Chromosome_2A	1698	1	71	46.878680800942284	0.7611561481930449	0.6752608962553714	67	0	0.6752608962553714	67	0	NA	NA	NA	0.44583147570218457	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007117	Chromosome_2A	2561	2	57	38.14916048418586	0.6125097555449258	0.8519003931847968	57	0	0.4098360655737705	15	0	0.9360374414976599	42	0	0.5059021922428331	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007118	Chromosome_2A	570	1	13	44.3859649122807	0.4630671166104237	0.9615384615384616	10	0	0.9615384615384616	10	0	NA	NA	NA	0.45112781954887216	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007119	Chromosome_2A	1473	2	13	37.3387644263408	0.2540699757194603	0.42735042735042733	13	0	0.6578947368421053	9	0	0	4	0	1.070154577883472	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007120	Chromosome_2A	1570	3	21	39.80891719745223	0.3439749608763693	89.1891891891892	4	1	84.84848484848484	2	1	92.6829268292683	2	1	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007121	Chromosome_2A	1077	1	14	37.697307335190345	0.3758225324027916	83.33333333333333	1	1	83.33333333333333	1	1	NA	NA	NA	82.82208588957056	6	1	NA	NA	NA	NA	no Swiss-Prot hit
GN016517	Chromosome_2A	11548	18	152	35.460685833044685	0.4261372547210716	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q2TBE0	Pre-mRNA splicing factor CWF19L2 (CWF19-like protein 2)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007122	Chromosome_2A	15473	24	116	33.7943514509145	0.26369756146294593	82.72637097916962	116	0.9568965517241379	82.43559718969556	36	0.9722222222222222	82.85249898415279	80	0.95	17.25043782837128	36	0.19444444444444445	methylated (>=50%)	Q0V8F1	Coronin-7 (Crn7)	actin filament organization [GO:0007015]; actin filament polymerization [GO:0030041]; cell migration [GO:0016477]; Golgi to endosome transport [GO:0006895]; positive regulation of hippo signaling [GO:0035332]	hit with GO BP
GN007123	Chromosome_2A	15835	12	181	35.86990843069151	0.355635174707167	80.15430267062314	161	0.8881987577639752	66.50211565585332	27	0.6666666666666666	82.91708291708292	134	0.9328358208955224	27.66323024054983	28	0.4642857142857143	methylated (>=50%)	Q27237	DnaJ homolog l(2)tid, mitochondrial (Protein lethal(2)tumorous imaginal discs) (TID50) (TID56)	mitochondrion organization [GO:0007005]; negative regulation of smoothened signaling pathway [GO:0045879]; protein folding [GO:0006457]; response to heat [GO:0009408]	hit with GO BP
GN007124	Chromosome_2A	324	1	7	41.358024691358025	0.5796064400715564	90.19607843137256	7	1	90.19607843137256	7	1	NA	NA	NA	38.62876254180602	35	0.45714285714285713	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007125	Chromosome_2A	24215	19	237	34.32170142473673	0.3337780834671597	85.00797448165869	231	0.9653679653679653	89.83137455288707	33	1	84.16592328278323	198	0.9595959595959596	56.8936877076412	36	0.5833333333333334	methylated (>=50%)	Q7TN73	N-acetylneuraminate (7)9-O-acetyltransferase (EC 2.3.1.45) (CAS1 domain-containing protein 1) (CAS1 protein) (Cas1p) (Sialate O-acetyltransferase) (SOAT)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN007126	Chromosome_2A	22921	9	224	36.31604205750185	0.29651739741980454	91.16431412306012	219	0.9634703196347032	95.23665963219777	80	0.9875	89.74332000841574	139	0.9496402877697842	77.00087950747582	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007127	Chromosome_2A	990	1	8	36.86868686868687	0.23910155778287645	81.05515587529976	8	1	81.05515587529976	8	1	NA	NA	NA	75.93818984547461	36	0.9166666666666666	methylated (>=50%)	Q7Z6M4	Transcription termination factor 4, mitochondrial (Mitochondrial transcription termination factor 4) (mTERF domain-containing protein 2) [Cleaved into: mTERF domain-containing protein 2 processed]	mitochondrial large ribosomal subunit assembly [GO:1902775]; mitochondrial ribosome assembly [GO:0061668]; rRNA processing [GO:0006364]	hit with GO BP
GN007128	Chromosome_2A	2431	2	67	36.69271904566022	0.8191565871199739	0.5072708826513358	67	0	0.45146726862302483	15	0	0.5171042163882259	52	0	0.6654835847382431	50	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN007129	Chromosome_2A	393	1	12	48.600508905852415	0.5261044176706827	0	12	0	0	12	0	NA	NA	NA	1.9002375296912113	71	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN007130	Chromosome_2A	582	1	16	48.10996563573883	0.47990105132962274	89.28571428571429	2	1	89.28571428571429	2	1	NA	NA	NA	40.60017652250662	67	0.19402985074626866	NA	NA	NA	NA	no Swiss-Prot hit
GN007131	Chromosome_2A	18798	16	234	35.9293541866156	0.3878566576446364	82.10872882036458	217	0.9447004608294931	80.67772170151406	28	0.8928571428571429	82.28808964395445	189	0.9523809523809523	35.54502369668246	11	0.36363636363636365	methylated (>=50%)	P47823	Translation initiation factor eIF2B subunit epsilon (eIF2B GDP-GTP exchange factor subunit epsilon)	astrocyte development [GO:0014002]; astrocyte differentiation [GO:0048708]; cytoplasmic translational initiation [GO:0002183]; myelination [GO:0042552]; oligodendrocyte development [GO:0014003]; ovarian follicle development [GO:0001541]; positive regulation of translational initiation [GO:0045948]; response to endoplasmic reticulum stress [GO:0034976]; response to glucose [GO:0009749]; response to heat [GO:0009408]; response to peptide hormone [GO:0043434]; T cell receptor signaling pathway [GO:0050852]; translational initiation [GO:0006413]	hit with GO BP
GN007132	Chromosome_2A	35279	12	450	35.667110745769435	0.4019872344925155	86.39985594021519	446	0.9775784753363229	89.54584404455869	24	1	86.22541100446641	422	0.976303317535545	74.91803278688525	26	0.9230769230769231	methylated (>=50%)	O02373	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; mesoderm migration involved in gastrulation [GO:0007509]; segment polarity determination [GO:0007367]; UDP-glucuronate biosynthetic process [GO:0006065]	hit with GO BP
GN007133	Chromosome_2A	2509	11	41	34.63531287365484	0.5501486758225302	0.6320224719101124	41	0	0.6802721088435374	25	0	0.5336179295624333	16	0	0.54333061668025	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007134	Chromosome_2A	5902	4	106	37.08912233141308	0.530011674265953	87.19369273385894	105	0.9523809523809523	50.666666666666664	5	0.6	88.09081977950005	100	0.97	0	3	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007135	Chromosome_2A	41240	23	426	34.14161008729389	0.35662580811394234	84.08724051203123	425	0.9317647058823529	93.81733021077284	92	1	82.22987169743843	333	0.9129129129129129	89.68042609853529	21	1	methylated (>=50%)	O35867	Neurabin-1 (Neurabin-I) (Neural tissue-specific F-actin-binding protein I) (PP1bp175) (Protein phosphatase 1 regulatory subunit 9A) (p180)	actin filament organization [GO:0007015]; calcium-mediated signaling [GO:0019722]; cellular response to toxic substance [GO:0097237]; excitatory postsynaptic potential [GO:0060079]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of long-term synaptic potentiation [GO:1900272]; negative regulation of spontaneous neurotransmitter secretion [GO:1904049]; negative regulation of stress fiber assembly [GO:0051497]; neuron development [GO:0048666]; neuron projection development [GO:0031175]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of long-term synaptic depression [GO:1900454]; positive regulation of neuron projection development [GO:0010976]; positive regulation of protein kinase activity [GO:0045860]; postsynaptic actin cytoskeleton organization [GO:0098974]; regulation of actin filament polymerization [GO:0030833]; regulation of dendritic spine morphogenesis [GO:0061001]; regulation of filopodium assembly [GO:0051489]; regulation of synapse assembly [GO:0051963]; regulation of synapse structural plasticity [GO:0051823]	hit with GO BP
GN007136	Chromosome_2A	24651	23	334	34.7409841385745	0.4500642508970746	87.05631912628998	333	0.972972972972973	83.463827121829	58	0.9482758620689655	87.67919200695047	275	0.9781818181818182	26.848249027237355	19	0.3157894736842105	methylated (>=50%)	Q6NZR5	Superkiller complex protein 2 (Ski2) (EC 3.6.4.13)	nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay [GO:0070478]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; rescue of stalled cytosolic ribosome [GO:0072344]	hit with GO BP
GN007137	Chromosome_2A	174	1	7	51.724137931034484	0.6062717770034843	1.0101010101010102	7	0	1.0101010101010102	7	0	NA	NA	NA	0	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007138	Chromosome_2A	363	1	8	44.90358126721763	0.44	1.1904761904761905	8	0	1.1904761904761905	8	0	NA	NA	NA	0.38255547054322875	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007139	Chromosome_2A	426	1	10	42.48826291079812	0.5205278592375366	0.2570694087403599	10	0	0.2570694087403599	10	0	NA	NA	NA	0.8937437934458788	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007140	Chromosome_2A	6077	3	135	36.531183149580386	0.6664400236878468	0.39549741405536964	132	0	0.64	12	0	0.3698100521095983	120	0	0.3474903474903475	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007141	Chromosome_2A	546	1	30	41.94139194139194	1.3043478260869565	0.7994186046511628	30	0	0.7994186046511628	30	0	NA	NA	NA	0.60882800608828	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007142	Chromosome_2A	10478	8	322	36.171025004771906	0.9396082009174079	1.1134095887077147	322	0	0.3684210526315789	46	0	1.2107870115575123	276	0	0.5535055350553506	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007143	Chromosome_2A	1455	1	48	40.06872852233677	0.8223242670434475	0.8791208791208791	48	0	0.8791208791208791	48	0	NA	NA	NA	1.206896551724138	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007144	Chromosome_2A	1230	1	43	38.21138211382114	0.9661862223927221	0.532319391634981	43	0	0.532319391634981	43	0	NA	NA	NA	0.9641342074816814	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007145	Chromosome_2A	29062	10	790	36.749019337967106	0.8051382446259632	10.020068402159474	730	0.07534246575342465	4.069767441860465	60	0.016666666666666666	10.388713792585921	670	0.08059701492537313	80.44103547459252	20	0.9	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007146	Chromosome_2A	39946	37	449	35.047313873729536	0.3684532174782421	90.76506817615437	443	0.9774266365688488	93.07951616101526	100	0.99	90.25861320836587	343	0.9737609329446064	94.89091411212372	43	0.9767441860465116	methylated (>=50%)	Q9PVV4	Pericentriolar material 1 protein (PCM-1) (xPCM-1)	cilium assembly [GO:0060271]; intraciliary transport involved in cilium assembly [GO:0035735]; microtubule anchoring at centrosome [GO:0034454]; non-motile cilium assembly [GO:1905515]; positive regulation of intracellular protein transport [GO:0090316]; protein localization to centrosome [GO:0071539]	hit with GO BP
GN007147	Chromosome_2A	21153	12	346	36.47709544745426	0.49557546691743354	85.12031139419675	321	0.9439252336448598	89.37867338371117	46	0.9565217391304348	84.42431727734322	275	0.9418181818181818	0.5192878338278932	44	0	methylated (>=50%)	Q8CDF7	piRNA biogenesis protein EXD1 (Exonuclease 3'-5' domain-containing protein 1) (Exonuclease 3'-5' domain-like-containing protein 1) (Inactive exonuclease EXD1) (mExd1)	piRNA processing [GO:0034587]; regulatory ncRNA-mediated gene silencing [GO:0031047]	hit with GO BP
GN007148	Chromosome_2A	6784	2	193	35.79009433962264	0.8917075296937997	2.28602383531961	193	0	3.187679083094556	57	0	1.8949984467225847	136	0	0.6687647521636507	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007149	Chromosome_2A	19474	17	266	35.2161856834754	0.44177405738415493	89.53935795954266	265	0.9811320754716981	91.99522102747909	56	0.9821428571428571	89.14610037625151	209	0.9808612440191388	74.72894078398666	17	0.9411764705882353	methylated (>=50%)	Q0IHV1	Inverted formin-2	actin cytoskeleton organization [GO:0030036]	hit with GO BP
GN007150	Chromosome_2A	493	2	16	40.56795131845842	0.7891156462585034	1.3100436681222707	16	0	1.5789473684210527	14	0	0	2	0	5.909510618651893	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007151	Chromosome_2A	5979	3	58	36.310419802642585	0.29645720382234214	45.0836820083682	57	0.49122807017543857	53.116279069767444	31	0.5806451612903226	40.26770775237033	26	0.38461538461538464	43.02235929067078	21	0.38095238095238093	sparse (10-50%)	F7H9X2	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN007152	Chromosome_2A	8177	14	247	37.9845909257674	0.8374877676601814	1.7018491245295368	242	0	1.6167953667953667	103	0	1.745481554840307	139	0	3.6125446605795952	44	0.022727272727272728	unmethylated (<10%)	Q27J81	Inverted formin-2 (HBEBP2-binding protein C)	actin filament polymerization [GO:0030041]; regulation of mitochondrial fission [GO:0090140]	hit with GO BP
GN007153	Chromosome_2A	5274	2	161	35.53280242700038	0.9672445433202448	0.9471107800361818	160	0	1.5375854214123006	54	0	0.8114121188326135	106	0	0.8169327887114742	42	0	unmethylated (<10%)	Q6NW96	Transcription factor Sp9	embryonic limb morphogenesis [GO:0030326]; embryonic pectoral fin morphogenesis [GO:0035118]; positive regulation of fibroblast growth factor receptor signaling pathway [GO:0045743]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007154	Chromosome_2A	1200	1	51	46.583333333333336	0.7876447876447876	1.430722891566265	51	0	1.430722891566265	51	0	NA	NA	NA	0.5070086489710707	60	0	unmethylated (<10%)	Q6NW96	Transcription factor Sp9	embryonic limb morphogenesis [GO:0030326]; embryonic pectoral fin morphogenesis [GO:0035118]; positive regulation of fibroblast growth factor receptor signaling pathway [GO:0045743]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007155	Chromosome_2A	9785	11	77	35.329586101175266	0.2521812678062678	85.40118870728084	77	0.935064935064935	81.30311614730878	23	0.8695652173913043	86.85800604229607	54	0.9629629629629629	93.59524595576097	43	1	methylated (>=50%)	Q8SWU7	Obg-like ATPase 1	NA	hit, no GO BP
GN007156	Chromosome_2A	7377	3	206	38.29469974244273	0.7628113037638052	1.0174003993534277	206	0	1.0325837540156035	181	0	0.9439200444197668	25	0	0.7065823726292302	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007157	Chromosome_2A	1235	4	33	35.62753036437247	0.8471035729874665	0.44272274488101826	33	0	0.4020100502512563	23	0	0.49261083743842365	10	0	0.2159827213822894	41	0	unmethylated (<10%)	Q0P4P2	Fibrinogen C domain-containing protein 1	NA	hit, no GO BP
GN004324	Chromosome_2A	513	1	26	43.85964912280702	1.0538874841972188	0.17035775127768313	26	0	0.17035775127768313	26	0	NA	NA	NA	0.37098103874690846	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007158	Chromosome_2A	723	1	19	51.45228215767635	0.3970805029628559	0.7371007371007371	16	0	0.7371007371007371	16	0	NA	NA	NA	1.2093726379440666	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007159	Chromosome_2A	4659	1	183	41.210560206052804	0.925126953125	4.105115845125175	183	0	4.105115845125175	183	0	NA	NA	NA	1.4068441064638784	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007160	Chromosome_2A	14442	13	258	35.24442597978119	0.5756112798328983	30.976196014577035	258	0.3798449612403101	22.770398481973434	31	0.1935483870967742	32.12265818310357	227	0.4052863436123348	37.829658452226546	47	0.425531914893617	sparse (10-50%)	Q08BM0	tRNA methyltransferase 10 homolog B (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 3) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10B)	tRNA N1-guanine methylation [GO:0002939]	hit with GO BP
GN007161	Chromosome_2A	8102	9	94	33.85583806467539	0.4058945169267502	82.1479486773325	94	0.9468085106382979	78.96296296296296	10	1	82.52926569705569	84	0.9404761904761905	46.42342774843975	45	0.4666666666666667	methylated (>=50%)	Q9CWD8	Iron-sulfur cluster transfer protein NUBPL (Nucleotide-binding protein-like)	iron-sulfur cluster assembly [GO:0016226]; mitochondrial respiratory chain complex I assembly [GO:0032981]; mitochondrion organization [GO:0007005]	hit with GO BP
GN007162	Chromosome_2A	7616	8	87	33.77100840336134	0.40155265669742285	85.36314914063944	86	0.9534883720930233	93.85150812064965	13	1	83.75467135634206	73	0.9452054794520548	54.687080311576686	54	0.6481481481481481	methylated (>=50%)	O08760	N-glycosylase/DNA lyase [Includes: 8-oxoguanine DNA glycosylase (EC 3.2.2.-); DNA-(apurinic or apyrimidinic site) lyase (AP lyase) (EC 4.2.99.18)]	base-excision repair [GO:0006284]; base-excision repair, AP site formation [GO:0006285]; cellular response to reactive oxygen species [GO:0034614]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; negative regulation of apoptotic process [GO:0043066]; negative regulation of double-strand break repair via single-strand annealing [GO:1901291]; nucleotide-excision repair [GO:0006289]; positive regulation of gene expression via chromosomal CpG island demethylation [GO:0044029]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; response to estradiol [GO:0032355]; response to oxidative stress [GO:0006979]; response to radiation [GO:0009314]	hit with GO BP
GN007163	Chromosome_2A	3535	5	33	36.294200848656295	0.28347346423017106	75.61817136285221	33	0.9090909090909091	75.13262599469496	30	0.9	78.78787878787878	3	1	43.42373869932925	43	0.4883720930232558	methylated (>=50%)	A6PVS8	Leucine-rich repeat and IQ domain-containing protein 3 (Leucine-rich repeat-containing protein 44)	NA	hit, no GO BP
GN002410	Chromosome_2A	703	2	12	52.347083926031296	0.24917296786389415	0	5	0	0	5	0	NA	NA	NA	0.8098891730605285	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007164	Chromosome_2A	11531	10	141	33.015349926285666	0.44990544594812226	65.8926487747958	141	0.8014184397163121	59.20245398773006	6	0.8333333333333334	66.15720524017468	135	0.8	0.6662965019433648	52	0	methylated (>=50%)	Q68FX0	Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial (Isocitric dehydrogenase subunit beta) (NAD(+)-specific ICDH subunit beta)	tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN007165	Chromosome_2A	581	3	10	32.18588640275387	0.6650641025641025	40.89108910891089	10	0	38.57142857142857	5	0	43.07692307692308	5	0	34.53853472882969	55	0.10909090909090909	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018057	Chromosome_2A	249	1	4	42.570281124497996	0.3557142857142857	0.6666666666666666	4	0	0.6666666666666666	4	0	NA	NA	NA	0.42052144659377627	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007166	Chromosome_2A	312	1	7	45.19230769230769	0.4394366197183099	1.0204081632653061	7	0	1.0204081632653061	7	0	NA	NA	NA	0.4139072847682119	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007167	Chromosome_2A	165	1	7	49.09090909090909	0.7042682926829268	2.6315789473684212	7	0	2.6315789473684212	7	0	NA	NA	NA	4.509803921568627	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007168	Chromosome_2A	2586	1	86	42.188708430007736	0.7593468952942863	1.2991699747383616	86	0	1.2991699747383616	86	0	NA	NA	NA	0.7772020725388601	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007169	Chromosome_2A	345	1	6	38.84057971014493	0.46205357142857145	0.5773672055427251	6	0	0.5773672055427251	6	0	NA	NA	NA	0.5128205128205128	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007170	Chromosome_2A	11157	15	261	36.219413820919605	0.7174375156755916	32.278430432350355	257	0.22178988326848248	33.95514567176693	102	0.2549019607843137	31.245156290364246	155	0.2	2.6680175616345827	39	0	sparse (10-50%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN007171	Chromosome_2A	3554	4	80	36.100168823860436	0.6914733206868038	1.9583843329253365	76	0	2.1108179419525066	27	0	1.9123505976095618	49	0	1.8726591760299625	26	0	unmethylated (<10%)	P32321	Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)	dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]; nucleoside salvage [GO:0043174]; pyrimidine nucleotide metabolic process [GO:0006220]	hit with GO BP
GN007172	Chromosome_2A	1613	4	13	31.866088034717915	0.3181700933161369	88.67647058823529	13	1	91.33663366336634	8	1	84.78260869565217	5	1	30.254777070063696	29	0.3448275862068966	methylated (>=50%)	Q5RC69	Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)	nucleoside salvage [GO:0043174]; pyrimidine nucleotide metabolic process [GO:0006220]	hit with GO BP
GN007173	Chromosome_2A	10757	18	166	34.4705772985033	0.5210394165354825	83.02287196415939	165	0.9333333333333333	81.02521703183133	47	0.8723404255319149	83.49184782608695	118	0.9576271186440678	37.82211138819618	19	0.5263157894736842	methylated (>=50%)	Q9Z1M8	Protein Red (Cytokine IK) (IK factor) (Protein RER)	mitotic cell cycle [GO:0000278]; mitotic spindle assembly checkpoint signaling [GO:0007094]; mRNA splicing, via spliceosome [GO:0000398]; protein localization to kinetochore [GO:0034501]	hit with GO BP
GN007174	Chromosome_2A	240	1	1	44.583333333333336	0.08421052631578947	96.875	1	1	96.875	1	1	NA	NA	NA	62.880633373934224	29	0.8275862068965517	NA	NA	NA	NA	no Swiss-Prot hit
GN007175	Chromosome_2A	24501	28	372	34.57001755030407	0.5083176877073566	83.26446280991736	349	0.9484240687679083	80.92105263157895	51	0.9019607843137255	83.65112327732679	298	0.9563758389261745	0.6070287539936102	49	0	methylated (>=50%)	O75665	Centriole and centriolar satellite protein OFD1 (Oral-facial-digital syndrome 1 protein) (Protein 71-7A)	cilium assembly [GO:0060271]; embryonic body morphogenesis [GO:0010172]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]	hit with GO BP
GN007176	Chromosome_2A	34329	19	377	33.65958810335285	0.38876166837746995	70.29531480038105	377	0.8249336870026526	80.07141263110913	74	0.9054054054054054	67.94176113469081	303	0.8052805280528053	38.83647798742138	10	0.4	methylated (>=50%)	Q3UTQ8	Cyclin-dependent kinase-like 5 (EC 2.7.11.22)	modulation of chemical synaptic transmission [GO:0050804]; neuron migration [GO:0001764]; positive regulation of axon extension [GO:0045773]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of Rac protein signal transduction [GO:0035022]; protein localization to nucleus [GO:0034504]; regulation of cilium assembly [GO:1902017]; regulation of dendrite development [GO:0050773]; regulation of postsynapse organization [GO:0099175]	hit with GO BP
GN007177	Chromosome_2A	19599	26	179	34.29256594724221	0.3122150260658205	81.41643059490085	176	0.9488636363636364	80.29341792228391	52	0.9615384615384616	81.76747645017352	124	0.9435483870967742	10.197368421052632	31	0.12903225806451613	methylated (>=50%)	Q8IZU2	WD repeat-containing protein 17	NA	hit, no GO BP
GN007178	Chromosome_2A	1969	3	21	36.617572371762314	0.3214618901016886	87.52941176470588	19	0.9473684210526315	87.36413043478261	13	1	87.75510204081633	6	0.8333333333333334	86.37700098007187	49	1	methylated (>=50%)	Q9NWZ8	Gem-associated protein 8 (Gemin-8) (Protein FAM51A1)	spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN007179	Chromosome_2A	519	1	17	40.26974951830443	0.8084112149532711	0.7507507507507507	17	0	0.7507507507507507	17	0	NA	NA	NA	0.4085556356645037	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007180	Chromosome_2A	474	1	11	41.983122362869196	0.5269860521528199	1.0101010101010102	11	0	1.0101010101010102	11	0	NA	NA	NA	0.8415990381725278	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007181	Chromosome_2A	411	1	22	49.87834549878345	0.8608149276466108	0	3	0	0	3	0	NA	NA	NA	0.9796533534287868	68	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007182	Chromosome_2A	2091	6	60	39.98087039693927	0.7183797804664372	0.5581395348837209	60	0	0.46296296296296297	46	0	0.7836990595611285	14	0	1.9700551615445232	70	0	unmethylated (<10%)	Q6RG02	Vitellogenin [Cleaved into: Vitellin]	lipid storage [GO:0019915]; lipid transport [GO:0006869]; oogenesis [GO:0048477]	hit with GO BP
GN007183	Chromosome_2A	847	2	18	38.13459268004723	0.5865650969529086	0.7709251101321586	18	0	0.7075471698113207	17	0	1.6666666666666667	1	0	0.6320541760722348	54	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN007184	Chromosome_2A	5441	13	127	37.897445322551	0.650628353738627	0.7112375533428165	127	0	0.675	103	0	0.8686210640608035	24	0	0.5809128630705395	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007185	Chromosome_2A	873	1	20	37.91523482245132	0.6387649081729714	0.1485884101040119	20	0	0.1485884101040119	20	0	NA	NA	NA	8.898305084745763	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007186	Chromosome_2A	1575	1	38	38.34920634920635	0.6565739674181339	0.574300071787509	38	0	0.574300071787509	38	0	NA	NA	NA	5.1509769094138544	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007187	Chromosome_2A	4341	7	105	37.36466252015665	0.6939561920218751	0.6787825706152836	105	0	0.6817562039814562	91	0	0.6666666666666666	14	0	4.332313965341489	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007188	Chromosome_2A	1274	3	12	38.93249607535322	0.2501963864886096	85.22727272727273	12	1	85.22727272727273	12	1	NA	NA	NA	93.56136820925553	19	1	methylated (>=50%)	Q5ZKN1	Cyclin-dependent kinase 9 (EC 2.7.11.22) (EC 2.7.11.23) (Cell division protein kinase 9)	positive regulation of protein localization to chromatin [GO:0120187]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; transcription by RNA polymerase II [GO:0006366]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN007189	Chromosome_2A	4124	6	28	31.377303588748788	0.2777819207925079	90.73093220338983	26	1	96.92307692307692	1	1	90.51014810751508	25	1	93.72772630078403	20	1	methylated (>=50%)	Q3T197	STING ER exit protein (STEEP)	endoplasmic reticulum membrane organization [GO:0090158]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN007190	Chromosome_2A	429	1	20	41.72494172494172	1.0751879699248121	0	18	0	0	18	0	NA	NA	NA	0.5533854166666666	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007191	Chromosome_2A	1347	3	36	35.04083147735709	0.8757494762695948	0.409626216077829	36	0	0.6191950464396285	23	0	0.2032520325203252	13	0	0.6303724928366762	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007192	Chromosome_2A	267	1	12	45.3183520599251	0.8929765886287625	0.3194888178913738	12	0	0.3194888178913738	12	0	NA	NA	NA	0.6353240152477764	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007193	Chromosome_2A	3033	8	76	35.839103198153644	0.7805839445719975	0.6453347674105943	76	0	0.6381620931716656	34	0	0.6505576208178439	42	0	0.947187141216992	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007194	Chromosome_2A	11930	12	309	36.018440905280805	0.7998351888688697	1.8102777056838828	309	0	1.6440088523553589	77	0	1.8532125071434402	232	0	2.8150134048257374	54	0	unmethylated (<10%)	P22488	Non-neuronal cytoplasmic intermediate filament protein (IF)	heterochromatin formation [GO:0031507]; nuclear envelope organization [GO:0006998]; nuclear migration [GO:0007097]; nuclear pore localization [GO:0051664]; protein localization to nuclear envelope [GO:0090435]	hit with GO BP
GN007195	Chromosome_2A	11425	10	121	35.667396061269145	0.3332763578644469	71.11861137897782	121	0.859504132231405	66.9047619047619	14	0.7857142857142857	71.4900314795383	107	0.8691588785046729	47.217968351199595	31	0.45161290322580644	methylated (>=50%)	Q5RA37	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 (EC 3.1.3.16) (RNA polymerase II-associated protein 2)	PERK-mediated unfolded protein response [GO:0036499]; snRNA transcription [GO:0009301]	hit with GO BP
GN007196	Chromosome_2A	10367	3	122	33.13398283013408	0.4345699085075474	89.1423140888572	121	0.9834710743801653	94.42622950819673	8	1	88.72950819672131	113	0.9823008849557522	94.31714023831347	19	1	methylated (>=50%)	Q642A5	DNA polymerase epsilon subunit 3 (DNA polymerase II subunit 3) (DNA polymerase epsilon subunit p17)	chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; DNA-templated DNA replication [GO:0006261]; heterochromatin formation [GO:0031507]; leading strand elongation [GO:0006272]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nucleosome assembly [GO:0006334]; regulation of DNA replication [GO:0006275]	hit with GO BP
GN007197	Chromosome_2A	417	1	13	41.247002398081534	0.7330628803245436	0.6024096385542169	13	0	0.6024096385542169	13	0	NA	NA	NA	0.45129748025573524	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007198	Chromosome_2A	786	3	5	36.1323155216285	0.19808467741935484	0.49627791563275436	5	0	0.49627791563275436	5	0	NA	NA	NA	1.2598425196850394	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007199	Chromosome_2A	507	1	22	42.603550295857985	0.9726194628531566	0.5807814149947201	22	0	0.5807814149947201	22	0	NA	NA	NA	0.6812551610239471	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007200	Chromosome_2A	2644	2	60	38.27534039334342	0.6207738542449286	0.9094088842252536	60	0	0.18867924528301888	15	0	1.07342206955775	45	0	0.535475234270415	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007201	Chromosome_2A	1854	1	58	45.79288025889968	0.597254004576659	0.591715976331361	45	0	0.591715976331361	45	0	NA	NA	NA	0.6153846153846154	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007202	Chromosome_2A	5396	6	51	34.46997776130467	0.31853637814706826	78.2539174928046	51	0.8235294117647058	83.38926174496645	19	0.8421052631578947	75.09043927648578	32	0.8125	1.6673614005835764	40	0	methylated (>=50%)	P84173	Prohibitin 1	NA	hit, no GO BP
GN007203	Chromosome_2A	873	1	6	47.99541809851088	0.2941374663072776	1.0638297872340425	6	0	1.0638297872340425	6	0	NA	NA	NA	0.351493848857645	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007204	Chromosome_2A	1575	1	56	41.46031746031746	0.8280757097791798	1.8279090503789568	56	0	1.8279090503789568	56	0	NA	NA	NA	3.532490187527257	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012061	Chromosome_2A	921	2	14	38.327904451682954	0.4159891598915989	NA	0	NA	NA	NA	NA	NA	NA	NA	14.285714285714286	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007205	Chromosome_2A	1107	1	3	35.59168925022583	0.08721113445378151	82.04081632653062	3	1	82.04081632653062	3	1	NA	NA	NA	0.7579585649317837	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007206	Chromosome_2A	40760	42	394	34.923945044160945	0.317161257989938	89.09566354325561	391	0.9846547314578005	87.90052606408418	73	0.9726027397260274	89.36204231732665	318	0.9874213836477987	8.387799564270152	24	0.08333333333333333	methylated (>=50%)	Q0P5W1	Vacuolar protein sorting-associated protein 8 homolog	endosomal vesicle fusion [GO:0034058]; protein targeting to vacuole [GO:0006623]	hit with GO BP
GN007207	Chromosome_2A	31702	20	257	36.13652135511955	0.24832993120022454	76.78851390378745	216	0.9027777777777778	84.86596538853071	68	0.9705882352941176	74.19319668556476	148	0.8716216216216216	17.647058823529413	11	0	methylated (>=50%)	Q68CZ2	Tensin-3 (EC 3.1.3.-) (Tensin-like SH2 domain-containing protein 1) (Tumor endothelial marker 6)	positive regulation of Rac protein signal transduction [GO:0035022]	hit with GO BP
GN007208	Chromosome_2A	10193	7	98	34.10183459236731	0.3311589006699666	89.16692096429661	98	0.9591836734693877	81.03448275862068	6	0.8333333333333334	89.6229455365775	92	0.967391304347826	62.68494342906875	39	0.7948717948717948	methylated (>=50%)	P51903	Phosphoglycerate kinase (EC 2.7.2.3)	gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]	hit with GO BP
GN007209	Chromosome_2A	7418	9	63	36.95066055540577	0.2547640074575606	91.62656400384985	61	0.9672131147540983	94.58689458689459	34	1	87.81204111600587	27	0.9259259259259259	72.24563515954245	48	0.9166666666666666	methylated (>=50%)	Q95LI3	Zinc finger Y-chromosomal protein	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007210	Chromosome_2A	3869	5	26	33.10933057637632	0.24580205645476583	85.69114470842332	26	0.9615384615384616	82.08092485549133	8	1	87.09677419354838	18	0.9444444444444444	3.6013400335008376	41	0.024390243902439025	methylated (>=50%)	Q9NRN7	L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (EC 2.7.8.7) (4'-phosphopantetheinyl transferase) (Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase) (AASD-PPT) (LYS5 ortholog)	10-formyltetrahydrofolate catabolic process [GO:0009258]; pantothenate metabolic process [GO:0015939]; protein maturation [GO:0051604]	hit with GO BP
GN007211	Chromosome_2A	29312	13	262	33.24918122270742	0.32394517635669745	80.2636340139571	261	0.9578544061302682	84.89583333333333	25	0.96	79.97031825427362	236	0.9576271186440678	87.07102952913009	42	0.9761904761904762	methylated (>=50%)	Q9H1I8	Activating signal cointegrator 1 complex subunit 2 (ASC-1 complex subunit p100) (Trip4 complex subunit p100)	DNA alkylation repair [GO:0006307]; DNA replication [GO:0006260]; regulation of DNA-templated transcription [GO:0006355]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN007212	Chromosome_2A	11621	6	162	35.607951122967044	0.4397846538539167	85.9271523178808	154	0.9285714285714286	86.2533692722372	15	0.9333333333333333	85.90174259920218	139	0.9280575539568345	1.9869281045751634	79	0	methylated (>=50%)	Q8R149	BUD13 homolog	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007213	Chromosome_2A	42912	24	439	34.31208053691275	0.34758365900137095	88.30018147528733	423	0.9598108747044918	89.55604075691411	42	0.9285714285714286	88.16407020311576	381	0.963254593175853	46.19739109032734	52	0.4230769230769231	methylated (>=50%)	Q9UHP3	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.4.19.12) (Deubiquitinating enzyme 25) (USP on chromosome 21) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25)	immune response [GO:0006955]; interleukin-17-mediated signaling pathway [GO:0097400]; mRNA metabolic process [GO:0016071]; negative regulation of ERAD pathway [GO:1904293]; negative regulation of interleukin-17-mediated signaling pathway [GO:1903882]; negative regulation of response to oxidative stress [GO:1902883]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]; protein modification process [GO:0036211]; protein-containing complex assembly [GO:0065003]; proteolysis [GO:0006508]; response to oxidative stress [GO:0006979]; stress-activated protein kinase signaling cascade [GO:0031098]	hit with GO BP
GN007214	Chromosome_2A	39183	20	425	36.03603603603604	0.334377018163646	87.62450305646989	413	0.9152542372881356	81.86257999326372	113	0.8141592920353983	89.58464623317101	300	0.9533333333333334	46.05543710021322	60	0.4	methylated (>=50%)	Q8CJ27	Abnormal spindle-like microcephaly-associated protein homolog (Calmodulin-binding protein Sha1) (Calmodulin-binding protein 1) (Spindle and hydroxyurea checkpoint abnormal protein)	brain development [GO:0007420]; cerebral cortex development [GO:0021987]; developmental growth [GO:0048589]; forebrain neuroblast division [GO:0021873]; maintenance of centrosome location [GO:0051661]; male gonad development [GO:0008584]; meiotic spindle assembly [GO:0090306]; negative regulation of asymmetric cell division [GO:0045769]; negative regulation of neuron differentiation [GO:0045665]; neuron migration [GO:0001764]; neuronal stem cell population maintenance [GO:0097150]; oogenesis [GO:0048477]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of neuroblast proliferation [GO:0002052]; regulation of meiotic cell cycle [GO:0051445]; spermatogenesis [GO:0007283]; spindle localization [GO:0051653]; spindle organization [GO:0007051]	hit with GO BP
GN007215	Chromosome_2A	8374	9	84	36.052065918318604	0.31013666160512576	85.90122414520894	84	0.9285714285714286	94.12628487518356	27	1	82.58293838862559	57	0.8947368421052632	64.1260162601626	12	0.6666666666666666	methylated (>=50%)	Q920Q8	Influenza virus NS1A-binding protein homolog (NS1-BP) (NS1-binding protein homolog) (Kelch family protein Nd1-L) (ND1-L2) (Nd1-S)	negative regulation of intrinsic apoptotic signaling pathway [GO:2001243]; negative regulation of protein ubiquitination [GO:0031397]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; response to virus [GO:0009615]; RNA splicing [GO:0008380]	hit with GO BP
GN007216	Chromosome_2A	26429	19	276	35.61239547466798	0.33365146020232866	75.50898995240614	227	0.8634361233480177	76.28424657534246	21	0.8095238095238095	75.44412607449857	206	0.8689320388349514	0.6144393241167435	18	0	methylated (>=50%)	Q17GZ9	Actin-related protein 5	chromatin remodeling [GO:0006338]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN007217	Chromosome_2A	408	1	5	42.40196078431372	0.2784602784602785	33.333333333333336	3	0	33.333333333333336	3	0	NA	NA	NA	0.9655751469353484	65	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007218	Chromosome_2A	35459	32	428	34.62590597591585	0.4038117029107209	92.64349834245913	401	0.9825436408977556	96.53762268266085	57	1	92.02726605979551	344	0.9796511627906976	72.67206477732793	21	0.7619047619047619	methylated (>=50%)	Q5F3U9	Sister chromatid cohesion protein PDS5 homolog B (Androgen-induced proliferation inhibitor)	mitotic sister chromatid cohesion [GO:0007064]; negative regulation of cell population proliferation [GO:0008285]	hit with GO BP
GN007219	Chromosome_2A	24980	12	314	35.20416333066453	0.4062284018376225	84.81945113143958	308	0.9383116883116883	76.75438596491227	32	0.875	85.59590414863295	276	0.9456521739130435	0.48381094157052473	50	0	methylated (>=50%)	Q8BZQ7	Anaphase-promoting complex subunit 2 (APC2) (Cyclosome subunit 2)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; metaphase/anaphase transition of mitotic cell cycle [GO:0007091]; negative regulation of gene expression [GO:0010629]; positive regulation of axon extension [GO:0045773]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of synapse maturation [GO:0090129]; positive regulation of synaptic plasticity [GO:0031915]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN007220	Chromosome_2A	27424	37	235	34.59743290548425	0.288481315952941	61.860375417845205	232	0.7456896551724138	68.94016227180528	65	0.8153846153846154	59.45573544609025	167	0.718562874251497	0.5541561712846348	46	0	methylated (>=50%)	Q96MT7	Cilia- and flagella-associated protein 44 (WD repeat-containing protein 52)	microtubule cytoskeleton organization [GO:0000226]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN007221	Chromosome_2A	36114	14	525	36.95796643960791	0.42690778741355107	79.39079458131981	445	0.8966292134831461	69.6600384862091	30	0.7333333333333333	80.03124076497657	415	0.908433734939759	0.6914433880726015	16	0	methylated (>=50%)	Q8IZE3	Protein-associating with the carboxyl-terminal domain of ezrin (Ezrin-binding protein PACE-1) (SCY1-like protein 3)	cell migration [GO:0016477]	hit with GO BP
GN007222	Chromosome_2A	813	1	0	32.349323493234934	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007223	Chromosome_2A	783	1	0	32.311621966794384	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007224	Chromosome_2A	13893	5	101	35.7014323760167	0.23010863142897484	90.09657594381036	100	0.96	95.16752577319588	33	1	88.19695872556119	67	0.9402985074626866	86.81933842239185	33	0.9090909090909091	methylated (>=50%)	A4IIK1	Malignant fibrous histiocytoma-amplified sequence 1 homolog	regulation of signal transduction [GO:0009966]	hit with GO BP
GN019087	Chromosome_2A	2424	4	19	33.37458745874587	0.2815537541723215	14.396887159533074	13	0.15384615384615385	8	9	0.1111111111111111	28.048780487804876	4	0.25	0.8727272727272727	79	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007225	Chromosome_2A	5115	6	134	36.73509286412512	0.7766069546891464	0.6821503979210655	134	0	0.5194805194805194	24	0	0.7197121151539384	110	0	0.8826125330979699	56	0	unmethylated (<10%)	Q5IS68	Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform)	GABA biosynthetic process [GO:0009449]; GABA shunt [GO:0006540]	hit with GO BP
GN007226	Chromosome_2A	9883	4	280	36.749974704037236	0.8420259572231924	1.1746031746031746	280	0	0.718562874251497	37	0	1.2442817932296433	243	0	0.8800234672924612	72	0	unmethylated (<10%)	Q3U0L2	Ankyrin repeat domain-containing protein 33B	NA	hit, no GO BP
GN007227	Chromosome_2A	1816	5	47	38.93171806167401	0.6858006042296072	0.6435643564356436	47	0	0.668724279835391	46	0	0	1	0	4.149933065595716	52	0	unmethylated (<10%)	Q460N3	Protein mono-ADP-ribosyltransferase PARP15 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 7) (ARTD7) (B-aggressive lymphoma protein 3) (Poly [ADP-ribose] polymerase 15) (PARP-15)	negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein poly-ADP-ribosylation [GO:0070212]	hit with GO BP
GN007228	Chromosome_2A	434	2	6	36.175115207373274	0.4318407960199005	80.34482758620689	6	1	80.68669527896996	5	1	78.94736842105263	1	1	34.01360544217687	26	0.34615384615384615	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007229	Chromosome_2A	3550	8	35	34.816901408450704	0.3270606134788457	88.99036022323693	35	1	94.88703923900118	19	1	84.60176991150442	16	1	83.33333333333333	17	0.9411764705882353	methylated (>=50%)	Q922V4	Pleiotropic regulator 1	mRNA splicing, via spliceosome [GO:0000398]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; protein localization to nucleus [GO:0034504]	hit with GO BP
GN007230	Chromosome_2A	3230	4	85	36.8421052631579	0.7772314085850737	0.982532751091703	85	0	1.0552763819095476	55	0	0.8960573476702509	30	0	0.16736401673640167	26	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007231	Chromosome_2A	3204	3	40	36.98501872659176	0.3680706732453747	89.58408679927668	39	0.9743589743589743	89.5799676898223	17	0.9411764705882353	89.58742632612966	22	1	91.23050259965338	32	1	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007232	Chromosome_2A	348	1	15	44.827586206896555	0.8615283050008252	0.2801120448179272	15	0	0.2801120448179272	15	0	NA	NA	NA	0.7082152974504249	50	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN007233	Chromosome_2A	698	3	26	40.83094555873925	0.9107698484392251	0.6756756756756757	26	0	0.7598784194528876	24	0	0	2	0	0.5775577557755776	24	0	unmethylated (<10%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN007234	Chromosome_2A	1068	1	44	41.760299625468164	0.9534166531407239	0.6242197253433208	44	0	0.6242197253433208	44	0	NA	NA	NA	7.697765164952111	101	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007235	Chromosome_2A	37338	20	369	35.05008302533612	0.3231774714532926	67.4774695948902	367	0.7929155313351499	69.9582338902148	71	0.7887323943661971	67.05116374448887	296	0.793918918918919	65.39792387543253	40	0.85	methylated (>=50%)	Q922J3	CAP-Gly domain-containing linker protein 1 (Cytoplasmic linker protein 170) (CLIP-170) (Restin)	cytoplasmic microtubule organization [GO:0031122]; microtubule bundle formation [GO:0001578]; positive regulation of dendrite development [GO:1900006]; positive regulation of microtubule polymerization [GO:0031116]; protein transport into plasma membrane raft [GO:0044861]	hit with GO BP
GN007236	Chromosome_2A	6910	17	70	36.35311143270622	0.3096847387591226	82.09061719586158	66	0.7727272727272727	83.6962919364332	42	0.8095238095238095	79.6195652173913	24	0.7083333333333334	0.45454545454545453	49	0	methylated (>=50%)	P36956	Sterol regulatory element-binding protein 1 (SREBP-1) (Class D basic helix-loop-helix protein 1) (bHLHd1) (Sterol regulatory element-binding transcription factor 1) [Cleaved into: Processed sterol regulatory element-binding protein 1 (Transcription factor SREBF1)]	cellular response to fatty acid [GO:0071398]; cellular response to insulin stimulus [GO:0032869]; cellular response to starvation [GO:0009267]; cholesterol metabolic process [GO:0008203]; circadian rhythm [GO:0007623]; lipid biosynthetic process [GO:0008610]; lipid metabolic process [GO:0006629]; lung development [GO:0030324]; negative regulation of triglyceride metabolic process [GO:0090209]; positive regulation of cholesterol biosynthetic process [GO:0045542]; positive regulation of miRNA transcription [GO:1902895]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of triglyceride biosynthetic process [GO:0010867]; regulation of mitophagy [GO:1901524]; regulation of protein localization to mitochondrion [GO:1903747]; regulation of protein stability [GO:0031647]; regulation of transcription by RNA polymerase II [GO:0006357]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to food [GO:0032094]; response to fructose [GO:0009750]; response to glucagon [GO:0033762]; response to nutrient [GO:0007584]; response to progesterone [GO:0032570]; response to retinoic acid [GO:0032526]; response to xenobiotic stimulus [GO:0009410]; SREBP signaling pathway [GO:0032933]	hit with GO BP
GN007237	Chromosome_2A	4401	5	36	36.55987275619177	0.2448741132285436	76.65198237885463	36	0.8333333333333334	89.54248366013071	14	1	70.09966777408638	22	0.7272727272727273	12.125403411710465	38	0.10526315789473684	methylated (>=50%)	O08623	Sequestosome-1 (Protein kinase C-zeta-interacting protein) (PKC-zeta-interacting protein) (Ubiquitin-binding protein p62)	aggrephagy [GO:0035973]; autophagy [GO:0006914]; brown fat cell proliferation [GO:0070342]; cellular response to stress [GO:0033554]; endosome organization [GO:0007032]; energy homeostasis [GO:0097009]; macroautophagy [GO:0016236]; membraneless organelle assembly [GO:0140694]; mitophagy [GO:0000423]; negative regulation of ferroptosis [GO:0110076]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of toll-like receptor 4 signaling pathway [GO:0034144]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pexophagy [GO:0000425]; positive regulation of autophagy [GO:0010508]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of protein localization to plasma membrane [GO:1903078]; positive regulation of protein phosphorylation [GO:0001934]; protein catabolic process [GO:0030163]; protein import into nucleus [GO:0006606]; protein localization to perinuclear region of cytoplasm [GO:1905719]; protein phosphorylation [GO:0006468]; protein targeting to vacuole involved in autophagy [GO:0071211]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of protein complex stability [GO:0061635]; response to ischemia [GO:0002931]; response to mitochondrial depolarisation [GO:0098780]; temperature homeostasis [GO:0001659]	hit with GO BP
GN007238	Chromosome_2A	5638	10	57	34.01915572898191	0.3497743205399328	66.27300192254874	57	0.7543859649122807	49.0674318507891	13	0.5384615384615384	70.34646739130434	44	0.8181818181818182	32.537028189202104	36	0.4166666666666667	methylated (>=50%)	Q32NR4	Tetratricopeptide repeat protein 29 (TPR repeat protein 29)	cilium movement [GO:0003341]	hit with GO BP
GN007239	Chromosome_2A	738	1	10	39.02439024390244	0.35882724753245493	76.2208067940552	10	0.9	76.2208067940552	10	0.9	NA	NA	NA	81.68120539254559	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007240	Chromosome_2A	465	1	12	41.505376344086024	0.6063899152358183	51.50501672240803	12	0.5833333333333334	51.50501672240803	12	0.5833333333333334	NA	NA	NA	54.17024935511608	16	0.5625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007241	Chromosome_2A	1241	2	22	41.659951651893635	0.40986609019395903	67.08571428571429	22	0.9090909090909091	68.81067961165049	21	0.9523809523809523	39.21568627450981	1	0	64.60348162475822	17	0.7647058823529411	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007242	Chromosome_2A	11506	16	115	33.21745176429689	0.363445340643313	73.56027642692602	113	0.8584070796460177	73.0164533820841	44	0.8863636363636364	73.85312069304982	69	0.8405797101449275	46.8014484007242	58	0.5	methylated (>=50%)	Q7Z4T9	Cilia- and flagella-associated protein 91 (CFAP91) (AMY-1-associating protein expressed in testis 1) (AAT-1) (MYCBP/AMY-1-associated testis-expressed protein 1) (Protein MAATS1)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]; spermatogenesis [GO:0007283]	hit with GO BP
GN007243	Chromosome_2A	7018	9	44	34.39726417782844	0.21345344548224585	71.3473160327053	44	0.8409090909090909	83.00578034682081	16	0.9375	66.17043121149898	28	0.7857142857142857	0.6520247083047358	63	0	methylated (>=50%)	Q96KN3	Homeobox protein PKNOX2 (Homeobox protein PREP-2) (PBX/knotted homeobox 2)	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN007244	Chromosome_2A	744	1	26	41.935483870967744	0.8033222591362126	4.651162790697675	26	0	4.651162790697675	26	0	NA	NA	NA	0.5386565272496832	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007245	Chromosome_2A	4437	2	119	36.24070317782285	0.8168274786628239	2.3751149249157217	119	0	0.54005400540054	41	0	3.3224907063197024	78	0	0.49525381758151055	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007246	Chromosome_2A	2562	5	47	37.15846994535519	0.5338635879974463	1.8196522442377678	47	0	1.733232856066315	30	0	1.9197207678883073	17	0	0.6501950585175552	45	0	unmethylated (<10%)	O08863	Baculoviral IAP repeat-containing protein 3 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 2) (C-IAP2) (Inhibitor of apoptosis protein 1) (mIAP1) (RING-type E3 ubiquitin transferase BIRC3)	cellular response to tumor necrosis factor [GO:0071356]; necroptotic process [GO:0070266]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; negative regulation of phosphorylation [GO:0042326]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; positive regulation of protein polyubiquitination [GO:1902916]; positive regulation of protein ubiquitination [GO:0031398]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of necroptotic process [GO:0060544]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]	hit with GO BP
GN007247	Chromosome_2A	1137	3	28	38.34652594547054	0.6755793226381461	0.5219985085756897	28	0	0.6237006237006237	21	0	0.2638522427440633	7	0	0.66711140760507	53	0	unmethylated (<10%)	Q8WMV1	Delta(14)-sterol reductase TM7SF2 (Delta-14-SR) (EC 1.3.1.70) (3-beta-hydroxysterol Delta (14)-reductase) (C-14 sterol reductase) (Sterol C14-reductase) (Transmembrane 7 superfamily member 2)	cholesterol biosynthetic process [GO:0006695]	hit with GO BP
GN007248	Chromosome_2A	2930	6	35	32.93515358361775	0.44410473163168973	65.28535078153399	35	0.6571428571428571	58.23336968375136	13	0.6153846153846154	68.8113413304253	22	0.6818181818181818	28.37837837837838	35	0.4	methylated (>=50%)	Q0KHZ6	Electron transfer flavoprotein subunit beta (Beta-ETF)	fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	hit with GO BP
GN012818	Chromosome_2A	345	1	14	42.31884057971015	0.9173789173789174	0.6278026905829597	14	0	0.6278026905829597	14	0	NA	NA	NA	1.8038331454340473	39	0	unmethylated (<10%)	P50729	Probable ATP-dependent DNA helicase RecS (EC 5.6.2.4) (Probable DNA 3'-5' helicase RecS) (Recombination protein S)	DNA recombination [GO:0006310]	hit with GO BP
GN007249	Chromosome_2A	972	2	24	45.16460905349794	0.498738615470133	0.1890359168241966	23	0	0.2028397565922921	20	0	0	3	0	1.0107015457788346	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007250	Chromosome_2A	357	1	12	44.817927170868344	0.6779553726855515	1.0638297872340425	12	0	1.0638297872340425	12	0	NA	NA	NA	0.7509386733416771	55	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN007251	Chromosome_2A	213	1	9	43.66197183098591	1.1906832298136647	0.5102040816326531	9	0	0.5102040816326531	9	0	NA	NA	NA	0.7220216606498195	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007252	Chromosome_2A	591	1	11	50.93062605752961	0.2955	0.6006006006006006	11	0	0.6006006006006006	11	0	NA	NA	NA	0.4955947136563877	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007253	Chromosome_2A	216	1	2	43.05555555555556	0.23275862068965517	0	2	0	0	2	0	NA	NA	NA	0.6337135614702155	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007254	Chromosome_2A	302	2	9	41.05960264900662	0.7395918367346939	0.19157088122605365	9	0	0.19157088122605365	9	0	NA	NA	NA	0.5006257822277848	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007255	Chromosome_2A	204	1	5	48.529411764705884	0.4927536231884058	0.7547169811320755	5	0	0.7547169811320755	5	0	NA	NA	NA	0.7840772014475271	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007256	Chromosome_2A	2177	2	62	39.64170877354157	0.7251364593630464	0.3808487486398259	58	0	0.3808487486398259	58	0	NA	NA	NA	0.6424965580541533	30	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN007257	Chromosome_2A	6565	6	177	36.64889565879665	0.8040038110446953	1.1382319463766284	136	0	1.3087447947650208	42	0	1.0921940250562159	94	0	1.1216056670602126	44	0	unmethylated (<10%)	Q9SN68	Ras-related protein RABF2b (AtRABF2b) (Ras-related protein Ara-7) (Ras-related protein Rab5B) (AtRab5B)	intracellular protein transport [GO:0006886]; late endosome to vacuole transport [GO:0045324]; vacuole organization [GO:0007033]	hit with GO BP
GN007258	Chromosome_2A	180	1	3	41.111111111111114	0.4051012753188297	2.898550724637681	3	0	2.898550724637681	3	0	NA	NA	NA	0.9609423434593924	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007259	Chromosome_2A	3708	5	103	37.27076591154261	0.8005433039672508	1.4978320851399292	103	0	2.695115103874228	33	0	0.8502884907379289	70	0	0.8585445625511039	47	0	unmethylated (<10%)	Q9SN68	Ras-related protein RABF2b (AtRABF2b) (Ras-related protein Ara-7) (Ras-related protein Rab5B) (AtRab5B)	intracellular protein transport [GO:0006886]; late endosome to vacuole transport [GO:0045324]; vacuole organization [GO:0007033]	hit with GO BP
GN007260	Chromosome_2A	25765	8	441	34.24024839899088	0.5853021052427156	80.51140544518027	404	0.9455445544554455	66.93198263386397	27	0.7407407407407407	81.23885572525002	377	0.9602122015915119	3.129251700680272	32	0	methylated (>=50%)	O77775	Neutrophil cytosol factor 2 (NCF-2) (67 kDa neutrophil oxidase factor) (Neutrophil NADPH oxidase factor 2) (p67-phox)	phagocytosis [GO:0006909]; respiratory burst [GO:0045730]; superoxide anion generation [GO:0042554]	hit with GO BP
GN007261	Chromosome_2A	3485	4	27	37.33142037302726	0.22310927956295762	72.16951296647692	27	0.6666666666666666	41.5	5	0.4	76.61115133960898	22	0.7272727272727273	69.82035928143712	12	0.75	methylated (>=50%)	Q8NHH1	Tubulin polyglutamylase TTLL11 (EC 6.3.2.-) (Tubulin--tyrosine ligase-like protein 11)	microtubule cytoskeleton organization [GO:0000226]; protein polyglutamylation [GO:0018095]	hit with GO BP
GN007262	Chromosome_2A	369	1	17	42.00542005420054	1.0448034643570954	0.4087193460490463	17	0	0.4087193460490463	17	0	NA	NA	NA	1.299283154121864	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007263	Chromosome_2A	681	1	23	35.82966226138032	1.0731757451181911	0.14316392269148176	23	0	0.14316392269148176	23	0	NA	NA	NA	0.8	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007264	Chromosome_2A	1537	5	29	34.743005855562785	0.6403430640156303	4.741784037558685	29	0	3.5446489434219495	21	0	7.390648567119156	8	0	1.2792236435818263	32	0	unmethylated (<10%)	Q9WVC5	Short transient receptor potential channel 7 (TrpC7) (Transient receptor protein 7) (TRP-7) (mTRP7)	calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; manganese ion transport [GO:0006828]; regulation of cytosolic calcium ion concentration [GO:0051480]; single fertilization [GO:0007338]	hit with GO BP
GN007265	Chromosome_2A	390	1	10	47.69230769230769	0.45112781954887216	0.7751937984496124	10	0	0.7751937984496124	10	0	NA	NA	NA	1.0899182561307903	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007266	Chromosome_2A	714	1	19	46.63865546218487	0.5757575757575758	0.4132231404958678	16	0	0.4132231404958678	16	0	NA	NA	NA	0.37037037037037035	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007267	Chromosome_2A	7085	3	164	34.12844036697248	0.796407345694963	1.114955786236063	164	0	1.0208087946603848	44	0	1.145475372279496	120	0	1.0548523206751055	25	0	unmethylated (<10%)	P22727	Protein Wnt-6	animal organ morphogenesis [GO:0009887]; axis specification [GO:0009798]; branching involved in ureteric bud morphogenesis [GO:0001658]; canonical Wnt signaling pathway [GO:0060070]; cell fate commitment [GO:0045165]; cell-cell signaling [GO:0007267]; epithelial-mesenchymal cell signaling [GO:0060684]; nephron tubule development [GO:0072080]; nephron tubule formation [GO:0072079]; neuron differentiation [GO:0030182]; odontogenesis of dentin-containing tooth [GO:0042475]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of tooth mineralization [GO:0070172]; signal transduction [GO:0007165]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN007268	Chromosome_2A	477	1	18	51.9916142557652	0.5585480093676815	1.0362694300518134	18	0	1.0362694300518134	18	0	NA	NA	NA	1.1161846778285134	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007269	Chromosome_2A	6438	4	78	34.762348555452	0.40110996089256956	91.41434262948208	78	0.9743589743589743	94.67640918580376	12	1	90.64500246184146	66	0.9696969696969697	84.07780979827089	20	1	methylated (>=50%)	O57594	Surfeit locus protein 6 homolog	ribosomal large subunit biogenesis [GO:0042273]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN007270	Chromosome_2A	63984	27	974	35.78707176794199	0.47685598521236	90.94077222466494	924	0.9686147186147186	93.92135142619773	136	0.9926470588235294	90.54350835101965	788	0.9644670050761421	79.59088795908879	27	0.9259259259259259	methylated (>=50%)	Q03164	Histone-lysine N-methyltransferase 2A (Lysine N-methyltransferase 2A) (EC 2.1.1.364) (ALL-1) (CXXC-type zinc finger protein 7) (Cysteine methyltransferase KMT2A) (EC 2.1.1.-) (Myeloid/lymphoid or mixed-lineage leukemia) (Myeloid/lymphoid or mixed-lineage leukemia protein 1) (Trithorax-like protein) (Zinc finger protein HRX) [Cleaved into: MLL cleavage product N320 (N-terminal cleavage product of 320 kDa) (p320); MLL cleavage product C180 (C-terminal cleavage product of 180 kDa) (p180)]	cellular response to transforming growth factor beta stimulus [GO:0071560]; circadian regulation of gene expression [GO:0032922]; definitive hemopoiesis [GO:0060216]; embryonic hemopoiesis [GO:0035162]; membrane depolarization [GO:0051899]; negative regulation of DNA methylation-dependent heterochromatin formation [GO:0090310]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein-containing complex assembly [GO:0065003]; response to potassium ion [GO:0035864]; T-helper 2 cell differentiation [GO:0045064]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN007271	Chromosome_2A	11545	3	205	35.6084885231702	0.5633023588141238	0.6780755569906362	201	0	0.6297229219143576	30	0	0.6851851851851852	171	0	0.488848151542927	50	0	unmethylated (<10%)	Q6RFL5	Brain-specific homeobox protein homolog	brain development [GO:0007420]; cell differentiation [GO:0030154]; eating behavior [GO:0042755]; regulation of transcription by RNA polymerase II [GO:0006357]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN007272	Chromosome_2A	303	1	17	41.254125412541256	1.3289473684210527	0.5804953560371517	17	0	0.5804953560371517	17	0	NA	NA	NA	2.124505928853755	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007273	Chromosome_2A	273	1	5	45.42124542124542	0.3689189189189189	1.875	5	0	1.875	5	0	NA	NA	NA	0.56657223796034	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007274	Chromosome_2A	285	1	13	45.96491228070175	0.8648459383753502	1.4705882352941178	13	0	1.4705882352941178	13	0	NA	NA	NA	0.3917727717923604	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007275	Chromosome_2A	3783	6	32	34.86650806238435	0.27832932509920955	0.6995724834823164	32	0	0.547645125958379	10	0	0.7831325301204819	22	0	0.7843137254901961	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007276	Chromosome_2A	489	1	16	41.922290388548056	0.7525971527510581	0.3968253968253968	16	0	0.3968253968253968	16	0	NA	NA	NA	2.2140221402214024	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007277	Chromosome_2A	5022	4	147	35.30465949820788	0.9399752475247525	0.6566850538481744	147	0	0.4419889502762431	23	0	0.6856461469667611	124	0	0.5845323741007195	45	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN007278	Chromosome_2A	2771	2	64	36.5211115120895	0.6936305857045076	0.5788219271365339	64	0	0	19	0	0.7482394366197183	45	0	0.2944062806673209	34	0	unmethylated (<10%)	Q5XIG2	Complement C1q tumor necrosis factor-related protein 1	negative regulation of platelet activation [GO:0010544]; negative regulation of platelet aggregation [GO:0090331]; positive regulation of aldosterone secretion [GO:2000860]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of gene expression [GO:0010628]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; regulation of glucose metabolic process [GO:0010906]	hit with GO BP
GN007279	Chromosome_2A	12376	29	303	38.009049773755656	0.677937764118325	0.8521751082399835	303	0	0.6622516556291391	207	0	1.1393060590367685	96	0	0.6654567453115547	49	0	unmethylated (<10%)	P24733	Myosin heavy chain, striated muscle	locomotion [GO:0040011]; muscle contraction [GO:0006936]; myofibril assembly [GO:0030239]; myosin filament organization [GO:0031033]	hit with GO BP
GN007280	Chromosome_2A	303	1	19	55.445544554455445	0.8177556818181818	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7281553398058253	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012852	Chromosome_2A	368	1	25	58.69565217391305	0.8064516129032258	0.8875739644970414	23	0	0.8875739644970414	23	0	NA	NA	NA	1.2704174228675136	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007281	Chromosome_2A	5153	4	46	36.405977100718026	0.2715871437279156	85.93687574910108	45	0.9333333333333333	86.74698795180723	1	1	85.9090909090909	44	0.9318181818181818	91.3003663003663	27	1	methylated (>=50%)	P14866	Heterogeneous nuclear ribonucleoprotein L (hnRNP L)	mRNA processing [GO:0006397]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; RNA processing [GO:0006396]	hit with GO BP
GN007282	Chromosome_2A	255	1	9	45.09803921568628	0.7285714285714285	72.30955259975816	9	1	72.30955259975816	9	1	NA	NA	NA	70.8321658727935	36	0.9722222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002090	Chromosome_2A	557	2	21	57.450628366247756	0.4665549838458777	46.15384615384615	13	0.46153846153846156	46.15384615384615	13	0.46153846153846156	NA	NA	NA	84.67677573822826	56	0.9107142857142857	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002091	Chromosome_2A	392	1	20	57.90816326530612	0.6201550387596899	73.6842105263158	9	1	73.6842105263158	9	1	NA	NA	NA	74.20020639834881	92	0.8152173913043478	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002487	Chromosome_2A	459	1	11	53.59477124183007	0.34375	90	1	1	90	1	1	NA	NA	NA	79.69475779694758	37	0.972972972972973	NA	NA	NA	NA	no Swiss-Prot hit
GN007283	Chromosome_2A	171	1	13	64.32748538011695	0.7370689655172413	NA	0	NA	NA	NA	NA	NA	NA	NA	0.33003300330033003	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003902	Chromosome_2A	1017	1	26	42.772861356932154	0.5589565805606054	15.714285714285714	8	0	15.714285714285714	8	0	NA	NA	NA	0.24154589371980675	22	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007284	Chromosome_2A	924	1	38	48.268398268398265	0.7209116107175855	1.0498687664041995	26	0	1.0498687664041995	26	0	NA	NA	NA	0.47074646940147946	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007285	Chromosome_2A	480	1	18	49.166666666666664	0.6370272063702721	0.24630541871921183	18	0	0.24630541871921183	18	0	NA	NA	NA	0.6521739130434783	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007286	Chromosome_2A	492	1	18	44.91869918699187	0.7270935960591133	0.5681818181818182	18	0	0.5681818181818182	18	0	NA	NA	NA	0.6158583525789069	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007287	Chromosome_2A	900	1	11	37.666666666666664	0.3502193292769209	0.5625879043600562	11	0	0.5625879043600562	11	0	NA	NA	NA	0.5260640841702535	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001354	Chromosome_2A	402	1	15	46.26865671641791	0.718455856070535	0.5067567567567568	15	0	0.5067567567567568	15	0	NA	NA	NA	0.7583965330444203	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007288	Chromosome_2A	615	1	21	49.59349593495935	0.5556272586473929	0.4784688995215311	21	0	0.4784688995215311	21	0	NA	NA	NA	1.5777395295467584	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007289	Chromosome_2A	606	1	28	43.06930693069307	0.9967105263157895	3.495311167945439	28	0	3.495311167945439	28	0	NA	NA	NA	7.902605724049551	45	0	unmethylated (<10%)	Q80WQ9	Zinc finger BED domain-containing protein 4	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN007290	Chromosome_2A	447	1	21	44.966442953020135	0.9294059405940595	0	19	0	0	19	0	NA	NA	NA	4.500818330605565	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016331	Chromosome_2A	192	1	13	55.208333333333336	0.9659442724458205	0.5270092226613966	13	0	0.5270092226613966	13	0	NA	NA	NA	5.531370038412292	95	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007291	Chromosome_2A	483	1	18	43.2712215320911	0.7976146788990826	0.6944444444444444	11	0	0.6944444444444444	11	0	NA	NA	NA	0.4716981132075472	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007292	Chromosome_2A	1023	1	35	43.79276637341153	0.721875	5.281602002503129	34	0	5.281602002503129	34	0	NA	NA	NA	2.667493796526055	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007293	Chromosome_2A	441	1	20	44.21768707482993	0.9386973180076629	10.09251471825063	20	0	10.09251471825063	20	0	NA	NA	NA	3.795124961431657	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007294	Chromosome_2A	402	1	23	43.03482587064676	1.2477732793522267	0.3770739064856712	23	0	0.3770739064856712	23	0	NA	NA	NA	0.7751937984496124	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002805	Chromosome_2A	312	1	15	46.47435897435897	0.8924485125858124	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007295	Chromosome_2A	444	1	12	45.270270270270274	0.527838319793937	0.6825938566552902	12	0	0.6825938566552902	12	0	NA	NA	NA	0.5154639175257731	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007296	Chromosome_2A	1213	3	32	35.119538334707336	0.8564872021182701	0.5945303210463734	32	0	0.6552006552006552	25	0	0.43383947939262474	7	0	0.47778308647873863	66	0	unmethylated (<10%)	Q24488	Tyrosine-protein kinase transmembrane receptor Ror (dRor) (EC 2.7.10.1)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; central nervous system development [GO:0007417]; protein phosphorylation [GO:0006468]	hit with GO BP
GN007297	Chromosome_2A	1821	1	38	39.9231191652938	0.5274157406137101	8.333333333333334	3	0	8.333333333333334	3	0	NA	NA	NA	3.1552897504640134	76	0	NA	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN007298	Chromosome_2A	366	1	6	37.431693989071036	0.47104247104247104	92.8374655647383	6	1	92.8374655647383	6	1	NA	NA	NA	90.42491268917345	48	0.9791666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018736	Chromosome_2A	2558	2	50	34.010946051602815	0.6762723066754792	36.22117752406537	50	0.3	48.033126293995856	22	0.5454545454545454	30.550033134526178	28	0.10714285714285714	49.15406497978739	77	0.6103896103896104	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007299	Chromosome_2A	2222	2	70	42.61926192619262	0.6940899273512664	0.5789270551910459	70	0	0.5360333531864205	49	0	0.6578947368421053	21	0	0.9676062263357172	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007300	Chromosome_2A	1455	1	33	38.144329896907216	0.6263043931962851	1.8571428571428572	33	0	1.8571428571428572	33	0	NA	NA	NA	1.6906700062617408	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007301	Chromosome_2A	22571	6	423	35.72726064418945	0.5872895660641734	90.80669710806697	420	0.9857142857142858	88.28125	11	1	90.8466819221968	409	0.9853300733496333	93.75322663913268	41	0.975609756097561	methylated (>=50%)	P51583	Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) [Includes: Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC); Phosphoribosylaminoimidazole succinocarboxamide synthetase (EC 6.3.2.6) (SAICAR synthetase)]	'de novo' AMP biosynthetic process [GO:0044208]; 'de novo' IMP biosynthetic process [GO:0006189]; 'de novo' XMP biosynthetic process [GO:0097294]; G1/S transition of mitotic cell cycle [GO:0000082]; GMP biosynthetic process [GO:0006177]; purine nucleobase biosynthetic process [GO:0009113]	hit with GO BP
GN007302	Chromosome_2A	835	2	24	34.25149700598802	0.9804305283757339	78.48332571950662	24	1	79.85372340425532	18	1	75.47445255474453	6	1	83.42686120463898	30	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017779	Chromosome_2A	333	1	15	42.64264264264264	1.003616636528029	78.95652173913044	15	1	78.95652173913044	15	1	NA	NA	NA	90.92618711800658	41	1	methylated (>=50%)	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN007303	Chromosome_2A	4164	4	93	36.57540826128722	0.6690300712131106	91.51398264223722	92	1	84.03990024937656	9	1	92.02886102044322	83	1	73.46398305084746	23	0.9130434782608695	methylated (>=50%)	Q06203	Amidophosphoribosyltransferase (ATase) (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (GPAT)	'de novo' AMP biosynthetic process [GO:0044208]; 'de novo' IMP biosynthetic process [GO:0006189]; 'de novo' XMP biosynthetic process [GO:0097294]; GMP biosynthetic process [GO:0006177]; purine nucleobase biosynthetic process [GO:0009113]; purine nucleotide biosynthetic process [GO:0006164]	hit with GO BP
GN007304	Chromosome_2A	8369	3	110	35.96606524076951	0.4064458078142991	82.35910878112713	110	0.9454545454545454	72.28915662650603	3	0.6666666666666666	82.58306538049304	107	0.9532710280373832	86.12656467315716	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007305	Chromosome_2A	1257	1	45	43.59586316626889	0.7567021618150684	80.62347188264059	39	0.9743589743589743	80.62347188264059	39	0.9743589743589743	NA	NA	NA	91.03509948580371	55	0.9818181818181818	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007306	Chromosome_2A	156	1	10	58.97435897435897	0.8125	0	1	0	0	1	0	NA	NA	NA	0.7427413909520594	79	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007307	Chromosome_2A	357	1	14	45.65826330532213	0.7558983666061706	1.5075376884422111	13	0	1.5075376884422111	13	0	NA	NA	NA	8.37954405422058	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007308	Chromosome_2A	552	1	19	42.7536231884058	0.7576392400491223	0.40404040404040403	19	0	0.40404040404040403	19	0	NA	NA	NA	0.8667883211678832	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007309	Chromosome_2A	935	4	9	35.93582887700535	0.298828125	0.34904013961605584	9	0	0.6993006993006993	5	0	0	4	0	0.6386554621848739	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007310	Chromosome_2A	336	1	3	47.61904761904762	0.1575984990619137	0	3	0	0	3	0	NA	NA	NA	0.8875739644970414	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007311	Chromosome_2A	348	1	2	53.160919540229884	0.08153701968134958	0	2	0	0	2	0	NA	NA	NA	1.0031347962382444	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007312	Chromosome_2A	360	1	15	40.55555555555556	1.0714285714285714	2.3944549464398235	15	0	2.3944549464398235	15	0	NA	NA	NA	2.9034436191762323	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007313	Chromosome_2A	429	1	14	43.35664335664335	0.6944958371877891	1.5172413793103448	14	0	1.5172413793103448	14	0	NA	NA	NA	2.7796161482461947	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007314	Chromosome_2A	483	1	29	45.3416149068323	1.1684184184184183	4.767510300176575	29	0	4.767510300176575	29	0	NA	NA	NA	3.3747214262973575	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003661	Chromosome_2A	633	1	13	42.49605055292259	0.4679822565969063	2.1739130434782608	13	0	2.1739130434782608	13	0	NA	NA	NA	0.4624277456647399	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007315	Chromosome_2A	615	1	28	52.19512195121951	0.6686339986021589	95.60922063666301	28	1	95.60922063666301	28	1	NA	NA	NA	90.65708418891171	52	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007316	Chromosome_2A	246	1	11	51.21951219512195	0.6959876543209876	0.9195402298850575	11	0	0.9195402298850575	11	0	NA	NA	NA	2.100525131282821	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020715	Chromosome_2A	631	1	8	40.09508716323296	0.31546056742907136	94.5945945945946	7	1	94.5945945945946	7	1	NA	NA	NA	85.29411764705883	10	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007317	Chromosome_2A	32303	16	954	36.97489397269604	0.8640815882941167	2.683054942746087	926	0	2.331426590396949	269	0	2.7955736750145603	657	0	0.7782101167315175	32	0	unmethylated (<10%)	Q27J81	Inverted formin-2 (HBEBP2-binding protein C)	actin filament polymerization [GO:0030041]; regulation of mitochondrial fission [GO:0090140]	hit with GO BP
GN007318	Chromosome_2A	4050	7	46	34.27160493827161	0.38716113010318065	85.98162640353861	46	0.9565217391304348	75.65011820330969	7	0.8571428571428571	87.71860095389508	39	0.9743589743589743	83.56819994682266	50	0.98	methylated (>=50%)	Q96B26	Exosome complex component RRP43 (Exosome component 8) (Opa-interacting protein 2) (OIP-2) (Ribosomal RNA-processing protein 43) (p9)	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; nuclear mRNA surveillance [GO:0071028]; nuclear polyadenylation-dependent rRNA catabolic process [GO:0071035]; RNA catabolic process [GO:0006401]; RNA processing [GO:0006396]; rRNA catabolic process [GO:0016075]; TRAMP-dependent tRNA surveillance pathway [GO:0071038]; U1 snRNA 3'-end processing [GO:0034473]; U4 snRNA 3'-end processing [GO:0034475]; U5 snRNA 3'-end processing [GO:0034476]	hit with GO BP
GN007319	Chromosome_2A	1410	1	3	46.666666666666664	0.04271648573592527	87.14285714285714	3	1	87.14285714285714	3	1	NA	NA	NA	80.01983143282102	25	0.96	NA	NA	NA	NA	no Swiss-Prot hit
GN007320	Chromosome_2A	951	1	6	38.69610935856993	0.17413861507003997	86.53198653198653	6	1	86.53198653198653	6	1	NA	NA	NA	89.59092750101256	33	1	methylated (>=50%)	Q6IRM9	Protein zwilch homolog	mitotic spindle assembly checkpoint signaling [GO:0007094]; protein localization to kinetochore [GO:0034501]	hit with GO BP
GN007321	Chromosome_2A	159	1	4	54.716981132075475	0.3361522198731501	81.73913043478261	4	0.75	81.73913043478261	4	0.75	NA	NA	NA	84.56162642947903	20	1	NA	NA	NA	NA	no Swiss-Prot hit
GN007322	Chromosome_2A	1674	1	38	41.63679808841099	0.5238142292490119	73.12348668280872	34	0.9705882352941176	73.12348668280872	34	0.9705882352941176	NA	NA	NA	86.72813635093601	65	0.9846153846153847	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007323	Chromosome_2A	546	1	28	39.1941391941392	1.338235294117647	92.90989660265879	28	1	92.90989660265879	28	1	NA	NA	NA	80.81846799580273	53	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007324	Chromosome_2A	654	1	18	46.48318042813456	0.5167690956979807	85.44668587896254	18	0.8888888888888888	85.44668587896254	18	0.8888888888888888	NA	NA	NA	82.02710665880966	36	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007325	Chromosome_2A	1374	2	59	44.97816593886463	0.862064931888512	87.51507840772014	50	1	87.46498599439776	36	1	87.82608695652173	14	1	85.15658515658515	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007326	Chromosome_2A	1350	1	19	38.2962962962963	0.39557694087165723	67.6	9	0.8888888888888888	67.6	9	0.8888888888888888	NA	NA	NA	1.7563527653213753	44	0.022727272727272728	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007327	Chromosome_2A	49102	14	792	34.9313673577451	0.529026118029431	81.48245366070347	767	0.8956975228161669	53.31664580725907	31	0.6451612903225806	82.42154899015189	736	0.90625	57.76277724204436	20	0.65	methylated (>=50%)	Q0P651	Cardiolipin-specific deacylase, mitochondrial (Alpha/beta hydrolase domain-containing protein 18) (Abhydrolase domain-containing protein 18)	NA	hit, no GO BP
GN007328	Chromosome_2A	2301	1	39	43.50282485875706	0.3583425176098519	94.36416184971098	39	1	94.36416184971098	39	1	NA	NA	NA	31.03448275862069	13	0.15384615384615385	methylated (>=50%)	Q8MQJ9	Protein brain tumor	asymmetric cell division [GO:0008356]; asymmetric neuroblast division resulting in ganglion mother cell formation [GO:0055060]; brain development [GO:0007420]; ganglion mother cell fate determination [GO:0007402]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of neuroblast proliferation [GO:0007406]; negative regulation of translation [GO:0017148]; neural precursor cell proliferation [GO:0061351]; neuroblast development [GO:0014019]; neuroblast differentiation [GO:0014016]; neuroblast fate determination [GO:0007400]; neuroblast proliferation [GO:0007405]; neuron differentiation [GO:0030182]; oogenesis [GO:0048477]; regulation of neuroblast proliferation [GO:1902692]; regulation of neurogenesis [GO:0050767]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; regulation of synaptic vesicle endocytosis [GO:1900242]; regulation of translation [GO:0006417]; rRNA transcription [GO:0009303]; segmentation [GO:0035282]; ventral cord development [GO:0007419]	hit with GO BP
GN007329	Chromosome_2A	8847	4	103	34.090652198485365	0.40071053440471965	70.12927054478301	103	0.8737864077669902	93.51851851851852	11	1	68.37403216200119	92	0.8586956521739131	83.52534562211981	27	0.9629629629629629	methylated (>=50%)	O14656	Torsin-1A (Dystonia 1 protein) (Torsin ATPase-1A) (EC 3.6.4.-) (Torsin family 1 member A)	cell adhesion [GO:0007155]; ERAD pathway [GO:0036503]; intermediate filament cytoskeleton organization [GO:0045104]; neuron projection development [GO:0031175]; nuclear envelope organization [GO:0006998]; nuclear membrane organization [GO:0071763]; positive regulation of synaptic vesicle endocytosis [GO:1900244]; protein deneddylation [GO:0000338]; protein folding [GO:0006457]; protein localization to nucleus [GO:0034504]; regulation of dopamine uptake involved in synaptic transmission [GO:0051584]; regulation of protein localization to cell surface [GO:2000008]; response to oxidative stress [GO:0006979]; synaptic vesicle membrane organization [GO:0048499]; synaptic vesicle transport [GO:0048489]; wound healing, spreading of cells [GO:0044319]	hit with GO BP
GN007330	Chromosome_2A	23818	10	216	33.71819632210933	0.3199785050966431	81.78372044937625	214	0.9205607476635514	82.50377073906486	14	1	81.74924165824065	200	0.915	54.79955866127253	35	0.5142857142857142	methylated (>=50%)	Q8VEH0	Transmembrane protein 144	NA	hit, no GO BP
GN007331	Chromosome_2A	7727	16	289	39.78258056166688	0.9474774629140992	0.5630102280191424	289	0	0.8087431693989071	157	0	0.37816507727721144	132	0	0.49566294919454773	51	0	unmethylated (<10%)	O96064	Paramyosin	NA	hit, no GO BP
GN007332	Chromosome_2A	53179	17	747	34.759961638992834	0.4653382087307333	64.43115847846806	692	0.7196531791907514	73.1041814316088	44	0.7954545454545454	63.866457477735224	648	0.7145061728395061	33.23170731707317	35	0.3142857142857143	methylated (>=50%)	Q9EQN5	DNA-binding protein SMUBP-2 (EC 5.6.2.3) (EC 5.6.2.5) (ATP-dependent helicase IGHMBP2) (Antifreeze enhancer-binding protein ortholog) (AEP) (DNA and RNA 5'-3' helicase IGHMBP2)	DNA damage response [GO:0006974]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuromuscular process [GO:0050905]; spinal cord motor neuron differentiation [GO:0021522]	hit with GO BP
GN001235	Chromosome_2A	787	1	11	38.88182973316391	0.37624407840410273	19.722650231124806	11	0	19.722650231124806	11	0	NA	NA	NA	8.229868747782902	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002530	Chromosome_2A	1896	1	19	38.71308016877637	0.2787954772352627	NA	0	NA	NA	NA	NA	NA	NA	NA	95.10791366906474	8	1	NA	NA	NA	NA	no Swiss-Prot hit
GN007333	Chromosome_2A	537	1	8	44.878957169459966	0.2967260671363448	91.77215189873418	8	1	91.77215189873418	8	1	NA	NA	NA	92.13421342134214	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007334	Chromosome_2A	1767	1	59	40.74702886247878	0.8049243740300651	0.6610841780520053	59	0	0.6610841780520053	59	0	NA	NA	NA	0.31887755102040816	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007335	Chromosome_2A	14147	8	331	34.72821092811197	0.7761854561065887	0.8208955223880597	329	0	0.5995203836930456	28	0	0.8409288194444444	301	0	0.6130268199233716	44	0	unmethylated (<10%)	Q10576	Prolyl 4-hydroxylase subunit alpha-1 (4-PH alpha-1) (EC 1.14.11.2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1) (Protein dumpy-18)	collagen and cuticulin-based cuticle development [GO:0040002]; cuticle development involved in collagen and cuticulin-based cuticle molting cycle [GO:0042338]; embryo development ending in birth or egg hatching [GO:0009792]; embryonic body morphogenesis [GO:0010172]; IRE1-mediated unfolded protein response [GO:0036498]; positive regulation of multicellular organism growth [GO:0040018]	hit with GO BP
GN007336	Chromosome_2A	34223	17	351	33.725856879876105	0.36089625339797193	43.210829730286186	350	0.48	58.84861407249467	32	0.65625	41.989900671438875	318	0.46226415094339623	0.9019165727170236	39	0	sparse (10-50%)	A0A1U8QWA2	Glycine betaine reductase ATRR (Nonribosomal peptide synthetase-like protein ATRR) [Includes: Carboxylic acid reductase (EC 1.2.1.-); Aldehyde reductase (EC 1.1.1.-)]	secondary metabolite biosynthetic process [GO:0044550]	hit with GO BP
GN007337	Chromosome_2A	16697	16	266	35.36563454512787	0.5098466924953365	84.99371983869902	263	0.9391634980988594	91.50409062303335	39	0.9487179487179487	84.22957600827301	224	0.9375	87.12918660287082	29	0.9655172413793104	methylated (>=50%)	Q6PAD2	Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak)	centriole replication [GO:0007099]; de novo centriole assembly involved in multi-ciliated epithelial cell differentiation [GO:0098535]; positive regulation of centriole replication [GO:0046601]	hit with GO BP
GN007338	Chromosome_2A	849	1	26	44.169611307420496	0.6347481021394065	0.47904191616766467	26	0	0.47904191616766467	26	0	NA	NA	NA	0.9195402298850575	35	0	unmethylated (<10%)	A7MB34	Protein FAM181B	NA	hit, no GO BP
GN007339	Chromosome_2A	18318	13	170	33.644502674964514	0.32830947284256123	81.32082152974505	170	0.9294117647058824	81.79384203480589	31	0.8709677419354839	81.20375483158476	139	0.9424460431654677	0.7816091954022989	30	0	methylated (>=50%)	Q8WXW3	Progesterone-induced-blocking factor 1 (PIBF) (Centrosomal protein of 90 kDa) (CEP90)	activation of Janus kinase activity [GO:0042976]; cilium assembly [GO:0060271]; mitotic metaphase chromosome alignment [GO:0007080]; mitotic spindle assembly [GO:0090307]; negative regulation of interleukin-12 production [GO:0032695]; negative regulation of natural killer cell activation [GO:0032815]; negative regulation of prostaglandin biosynthetic process [GO:0031393]; negative regulation of tyrosine phosphorylation of STAT protein [GO:0042532]; non-motile cilium assembly [GO:1905515]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; protein localization to centrosome [GO:0071539]	hit with GO BP
GN007340	Chromosome_2A	1659	3	38	35.2622061482821	0.7377993118460783	5.3269813772195755	38	0	11.84407796101949	13	0	2.679658952496955	25	0	3.274161735700197	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007341	Chromosome_2A	4303	5	64	35.02207762026493	0.49230769230769234	35.76089793787523	64	0.390625	65.92148309705561	33	0.696969696969697	8.062093139709564	31	0.06451612903225806	0.8905852417302799	32	0	sparse (10-50%)	Q01664	Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)	cellular response to dexamethasone stimulus [GO:0071549]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; host-mediated activation of viral transcription [GO:0043923]; host-mediated suppression of viral transcription [GO:0043922]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045736]; negative regulation of DNA binding [GO:0043392]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA-templated transcription [GO:0045893]; protein-containing complex assembly [GO:0065003]; regulation of mitotic cell cycle phase transition [GO:1901990]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007342	Chromosome_2A	24258	7	326	36.91153433918707	0.3955280136842421	83.26254232071406	275	0.9236363636363636	89.28046989720998	16	1	82.99922898997687	259	0.918918918918919	3.290414878397711	54	0	methylated (>=50%)	Q3SWX0	Magnesium transporter NIPA2 (Non-imprinted in Prader-Willi/Angelman syndrome region protein 2 homolog)	magnesium ion transport [GO:0015693]	hit with GO BP
GN007343	Chromosome_2A	22959	25	453	34.522409512609435	0.6650178524385971	2.400030236601406	453	0	0.9778994719342852	106	0	2.740688685874912	347	0	0.5219660722053067	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007344	Chromosome_2A	3192	4	95	37.96992481203007	0.8281919556899278	0.8254430687059966	95	0	0.9554140127388535	67	0	0.676730869338886	28	0	1.2525252525252526	51	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007345	Chromosome_2A	8079	10	228	38.25968560465404	0.771276542291807	1.3897208577932192	225	0	0.47101449275362317	86	0	1.84356541972436	139	0	0.6565307532826538	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007346	Chromosome_2A	11301	9	291	34.191664454473056	0.8828301863999324	1.581281363052865	291	0	0.7973143096936635	39	0	1.7078956286004745	252	0	2.05607476635514	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007347	Chromosome_2A	5490	11	113	34.3351548269581	0.7028844127504231	1.8011728567439262	113	0	2.0851688693098387	59	0	1.543784934788395	54	0	1.1009870918754745	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007348	Chromosome_2A	2322	6	77	38.8458225667528	0.8846589643996933	0.8607968519429414	77	0	1.0015408320493067	51	0	0.6122448979591837	26	0	0.8093889113719142	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007349	Chromosome_2A	9463	7	176	34.81982457994294	0.6139970964419248	1.179843422648583	174	0	1.0520163646990064	56	0	1.2573047635912875	118	0	0.6791171477079796	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007350	Chromosome_2A	6416	4	141	40.89775561097257	0.6548573786333974	18.490514160021995	141	0.19148936170212766	16.909522195865808	66	0.18181818181818182	19.56974323386537	75	0.2	81.42999006951341	24	0.9583333333333334	sparse (10-50%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN007351	Chromosome_2A	1092	1	7	38.00366300366301	0.17964747356051705	90.19607843137256	6	1	90.19607843137256	6	1	NA	NA	NA	87.75981524249423	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007352	Chromosome_2A	26655	9	322	36.70605890076909	0.36009777745220534	84.0507233434542	298	0.9865771812080537	92.24489795918367	9	1	83.80450113448212	289	0.986159169550173	85.86220629231381	29	1	methylated (>=50%)	Q9NRZ9	Lymphoid-specific helicase (LSH) (EC 3.6.4.-) (Proliferation-associated SNF2-like protein) (SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin subfamily A member 6) (SMARCA6)	DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; double-strand break repair [GO:0006302]; double-strand break repair via homologous recombination [GO:0000724]; kidney development [GO:0001822]; lymphocyte proliferation [GO:0046651]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; pericentric heterochromatin formation [GO:0031508]	hit with GO BP
GN007353	Chromosome_2A	6743	7	68	34.98442829601068	0.3304825152547357	78.25407457021656	68	0.9558823529411765	87.42603550295858	12	1	76.62371811727583	56	0.9464285714285714	67.94354838709677	13	0.8461538461538461	methylated (>=50%)	Q4V835	Lymphoid-specific helicase (LSH) (EC 3.6.4.-) (Proliferation-associated SNF2-like protein) (SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin subfamily A member 6) (SMARCA6)	DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; double-strand break repair [GO:0006302]; lymphocyte proliferation [GO:0046651]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; pericentric heterochromatin formation [GO:0031508]	hit with GO BP
GN007354	Chromosome_2A	3249	4	83	37.457679285934134	0.7346273291925466	0.9345794392523364	82	0	1.0772833723653397	69	0	0.46367851622874806	13	0	0.2612671456564337	51	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007355	Chromosome_2A	2139	4	69	39.83169705469846	0.8281068524970964	0.9633911368015414	69	0	0.9528851244044468	63	0	1.0695187165775402	6	0	1.2268337248760115	60	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN007356	Chromosome_2A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007357	Chromosome_2A	8201	8	231	36.12974027557615	0.8632002223579051	0.3845851973942391	224	0	0.3541912632821724	31	0	0.38924594912645966	193	0	24.152968802415298	44	0.20454545454545456	unmethylated (<10%)	Q9UHF1	Epidermal growth factor-like protein 7 (EGF-like protein 7) (Multiple epidermal growth factor-like domains protein 7) (Multiple EGF-like domains protein 7) (NOTCH4-like protein) (Vascular endothelial statin) (VE-statin) (Zneu1)	blood vessel development [GO:0001568]; negative regulation of Notch signaling pathway [GO:0045746]; positive regulation of endothelial cell proliferation [GO:0001938]; vasculogenesis [GO:0001570]	hit with GO BP
GN007358	Chromosome_2A	162	1	4	46.91358024691358	0.48214285714285715	3.225806451612903	4	0	3.225806451612903	4	0	NA	NA	NA	1.644736842105263	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007359	Chromosome_2A	507	1	18	49.30966469428008	0.5854127910706267	6.211180124223603	18	0	6.211180124223603	18	0	NA	NA	NA	6.520031421838177	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007360	Chromosome_2A	672	1	11	40.773809523809526	0.3938618925831202	0.9615384615384616	5	0	0.9615384615384616	5	0	NA	NA	NA	0.8849557522123894	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007361	Chromosome_2A	20818	13	231	34.350081660101836	0.37677955265557866	81.51004304160689	231	0.9523809523809523	84.72135253600501	30	0.9333333333333333	81.17110567708677	201	0.9552238805970149	7.508250825082508	43	0.11627906976744186	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007362	Chromosome_2A	3443	2	71	32.9073482428115	0.7620913687859686	0.7026789635485288	71	0	0.41450777202072536	19	0	0.780161604903873	52	0	0.45689917758148035	56	0	unmethylated (<10%)	Q556Y8	Probable rhodanese domain-containing dual specificity protein phosphatase (EC 3.1.3.16) (EC 3.1.3.48)	response to cisplatin [GO:0072718]; sorocarp development [GO:0030587]	hit with GO BP
GN007363	Chromosome_2A	1443	2	31	33.125433125433126	0.788107822410148	0.23629489603024575	29	0	0.28368794326241137	12	0	0.21261516654854712	17	0	3.3863867253640367	73	0	unmethylated (<10%)	Q9M8K7	Dual specificity protein phosphatase 1B (AtDsPTP1B) (EC 3.1.3.16) (EC 3.1.3.48) (MAPK phosphatase 2) (AtMKP2)	cellular response to oxidative stress [GO:0034599]; intracellular signal transduction [GO:0035556]; negative regulation of plant-type hypersensitive response [GO:0034051]; response to oxidative stress [GO:0006979]; response to ozone [GO:0010193]	hit with GO BP
GN007364	Chromosome_2A	3625	2	81	37.324137931034485	0.643674507310871	63.61612113115119	80	0.625	15.151515151515152	12	0.08333333333333333	70.53435114503817	68	0.7205882352941176	0.8812421317666806	69	0	methylated (>=50%)	Q8WTR2	Dual specificity protein phosphatase 19 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity phosphatase TS-DSP1) (Low molecular weight dual specificity phosphatase 3) (LMW-DSP3) (Protein phosphatase SKRP1) (Stress-activated protein kinase pathway-regulating phosphatase 1) (SAPK pathway-regulating phosphatase 1)	negative regulation of JNK cascade [GO:0046329]; positive regulation of JNK cascade [GO:0046330]; positive regulation of MAPK cascade [GO:0043410]; regulation of JNK cascade [GO:0046328]	hit with GO BP
GN007365	Chromosome_2A	267	1	6	45.69288389513109	0.445	1.0362694300518134	6	0	1.0362694300518134	6	0	NA	NA	NA	3.2549728752260396	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007366	Chromosome_2A	4858	2	68	31.000411692054342	0.6882396079869328	30.55925432756325	66	0.24242424242424243	81.93224592220828	14	0.8571428571428571	12.00724966017218	52	0.07692307692307693	0.7597684515195369	42	0	sparse (10-50%)	Q91790	Dual specificity protein phosphatase 1-A (EC 3.1.3.16) (EC 3.1.3.48) (XCL100) (XCL100-alfa)	endoderm formation [GO:0001706]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of meiotic cell cycle [GO:0051447]; negative regulation of p38MAPK cascade [GO:1903753]; peptidyl-serine dephosphorylation [GO:0070262]; regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090266]	hit with GO BP
GN007367	Chromosome_2A	4107	4	46	32.31068906744582	0.430591452991453	79.56123299083588	46	0.9782608695652174	85.5813953488372	9	1	78.24763193504737	37	0.972972972972973	59.11270983213429	16	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007368	Chromosome_2A	1041	1	23	39.481268011527376	0.5806052669867597	23.692704970949	23	0.21739130434782608	23.692704970949	23	0.21739130434782608	NA	NA	NA	37.139969681657405	35	0.37142857142857144	sparse (10-50%)	A4IJ15	Cilia- and flagella-associated protein 97	NA	hit, no GO BP
GN007369	Chromosome_2A	21343	6	307	35.224663824204654	0.4640960101971772	75.350579658786	307	0.9153094462540716	72.22222222222223	18	0.9444444444444444	75.53151609275425	289	0.9134948096885813	20.463458110516935	47	0.19148936170212766	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007370	Chromosome_2A	16076	7	249	35.18910176660861	0.500659637537053	76.24390530458791	248	0.8467741935483871	80.15768725361367	19	1	75.85962195987355	229	0.834061135371179	89.40427467030469	33	1	methylated (>=50%)	Q96NC0	Zinc finger matrin-type protein 2	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007371	Chromosome_2A	13933	12	108	32.71370128471973	0.29168469386330964	85.20954223081883	106	0.9811320754716981	82.98245614035088	17	1	85.5933484504913	89	0.9775280898876404	86.75105485232068	34	1	methylated (>=50%)	Q9D281	Protein Noxp20 (Nervous system overexpressed protein 20) (Protein FAM114A1)	angiotensin-activated signaling pathway [GO:0038166]; connective tissue replacement [GO:0097709]; fibroblast activation [GO:0072537]; fibroblast migration [GO:0010761]; fibroblast proliferation [GO:0048144]; gene expression [GO:0010467]; heart valve morphogenesis [GO:0003179]; inflammatory response [GO:0006954]; tissue remodeling [GO:0048771]	hit with GO BP
GN007372	Chromosome_2A	26137	15	577	36.806060374182195	0.6518568155188532	8.167843483377464	565	0.024778761061946902	20.173187940987813	69	0.11594202898550725	6.612943424441306	496	0.012096774193548387	0.4170676932948348	54	0	unmethylated (<10%)	Q9MZ34	Sodium- and chloride-dependent taurine transporter (Solute carrier family 6 member 6) (Taurine transporter) (TauT)	amino acid transport [GO:0006865]; negative regulation of cellular senescence [GO:2000773]; neurotransmitter transport [GO:0006836]; positive regulation of mitochondrial translation [GO:0070131]; sodium ion transmembrane transport [GO:0035725]; taurine transmembrane transport [GO:0015734]	hit with GO BP
GN007373	Chromosome_2A	1170	1	34	39.23076923076923	0.7707211221761537	2.1967526265520534	34	0	2.1967526265520534	34	0	NA	NA	NA	1.0687022900763359	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007374	Chromosome_2A	1263	1	19	38.71733966745843	0.4139269327629627	3.7650602409638556	19	0	3.7650602409638556	19	0	NA	NA	NA	0.6793478260869565	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002252	Chromosome_2A	390	1	2	46.41025641025641	0.10276679841897234	81.25	1	1	81.25	1	1	NA	NA	NA	74.19354838709677	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN007375	Chromosome_2A	759	1	18	46.3768115942029	0.4414073858679849	37.55522827687776	18	0.3333333333333333	37.55522827687776	18	0.3333333333333333	NA	NA	NA	1.1494252873563218	69	0	sparse (10-50%)	Q08E39	Protein sprouty homolog 2 (Spry-2)	cellular response to vascular endothelial growth factor stimulus [GO:0035924]; negative regulation of angiogenesis [GO:0016525]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell projection organization [GO:0031345]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of fibroblast growth factor receptor signaling pathway [GO:0040037]; negative regulation of lens fiber cell differentiation [GO:1902747]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of Ras protein signal transduction [GO:0046580]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of vascular endothelial growth factor signaling pathway [GO:1900747]; positive regulation of cell migration [GO:0030335]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]	hit with GO BP
GN007376	Chromosome_2A	1875	1	55	36.373333333333335	0.887959909417326	0.5944055944055944	55	0	0.5944055944055944	55	0	NA	NA	NA	0.5203405865657521	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007377	Chromosome_2A	27397	11	631	36.31784501952769	0.7002785233909743	2.1941266974379556	626	0	1.6687016687016687	65	0	2.241171968951569	561	0	7.546628407460545	53	0	unmethylated (<10%)	D4A6L0	Metabotropic glycine receptor (mGlyR) (G protein-coupled receptor 158)	brain development [GO:0007420]; cognition [GO:0050890]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of neurotransmitter secretion [GO:0001956]; protein localization to plasma membrane [GO:0072659]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN007378	Chromosome_2A	813	1	23	39.36039360393604	0.7322603383458647	1.1406844106463878	23	0	1.1406844106463878	23	0	NA	NA	NA	0.3740648379052369	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007379	Chromosome_2A	5354	6	112	35.69293985805005	0.6568044355942859	0.593952483801296	112	0	0.43149946062567424	55	0	0.6753106428957321	57	0	0.702576112412178	23	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007380	Chromosome_2A	381	1	20	43.56955380577428	1.125886524822695	8.881578947368421	20	0	8.881578947368421	20	0	NA	NA	NA	0.2603036876355748	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007381	Chromosome_2A	1638	2	43	41.08669108669109	0.6226375064090097	0.32733224222585927	43	0	0.3058103975535168	33	0	0.4149377593360996	10	0	0.5040957781978576	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007382	Chromosome_2A	2488	5	63	35.08842443729903	0.822664959166964	0.7102693104468778	63	0	0.4498714652956298	30	0	0.9325287986834887	33	0	0.33855268726195514	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007383	Chromosome_2A	724	3	20	38.812154696132595	0.7376464595007641	2.1433850702143387	20	0	2.449324324324324	17	0	0	3	0	1.0108303249097472	48	0	unmethylated (<10%)	O16025	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (AOS) (EC 4.2.1.-) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]	arachidonate metabolic process [GO:0019369]; lipid oxidation [GO:0034440]	hit with GO BP
GN007384	Chromosome_2A	5483	8	54	36.00218858289258	0.3046838340015312	58.70408396075747	53	0.8113207547169812	53.37620578778135	10	0.6	59.58521669768678	43	0.8604651162790697	27.216748768472907	11	0.18181818181818182	methylated (>=50%)	Q2I0E5	Protein inturned (Inturned planar cell polarity effector homolog) (Xint)	ciliary basal body organization [GO:0032053]; cilium assembly [GO:0060271]; establishment of planar polarity [GO:0001736]; intracellular protein localization [GO:0008104]; nervous system development [GO:0007399]; regulation of smoothened signaling pathway [GO:0008589]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN007385	Chromosome_2A	43864	27	879	35.22478570125843	0.6491008369490305	39.51072446922504	826	0.42736077481840196	42.462600690448795	66	0.36363636363636365	39.311815450227776	760	0.4328947368421053	0.6714225765841376	35	0	sparse (10-50%)	P24643	Calnexin (pp90)	clathrin-dependent endocytosis [GO:0072583]; ERAD pathway [GO:0036503]; protein folding [GO:0006457]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN007386	Chromosome_2A	1105	2	16	40.09049773755656	0.3835806647574416	83.00803673938002	16	0.9375	84.25	15	0.9333333333333333	69.01408450704226	1	1	84.76286579212916	23	0.9565217391304348	methylated (>=50%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007387	Chromosome_2A	697	2	8	39.31133428981349	0.30494941208640963	92.70588235294117	8	1	92.816091954023	7	1	92.20779220779221	1	1	91.6076845298281	23	1	methylated (>=50%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN007388	Chromosome_2A	23642	16	182	34.93359275864986	0.2542091964086849	78.85499765368371	182	0.8956043956043956	91.88111634650235	51	0.9803921568627451	74.30344478216819	131	0.8625954198473282	12.181303116147308	13	0.07692307692307693	methylated (>=50%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN007389	Chromosome_2A	37420	16	445	35.95403527525387	0.36934253971498615	82.38734656891012	434	0.9009216589861752	83.99742930591259	48	0.875	82.15061891713125	386	0.9041450777202072	90.54684188215346	32	0.96875	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007390	Chromosome_2A	14698	16	138	34.54211457341135	0.3183237626512699	93.08492399131329	137	1	95.06105834464043	60	1	91.64691943127963	77	1	0.2039151712887439	93	0	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007391	Chromosome_2A	6361	8	178	37.02248074202169	0.8167340390846585	1.0830324909747293	178	0	0.8130081300813008	92	0	1.349072512647555	86	0	0.7372456502506636	41	0	unmethylated (<10%)	Q460N5	Protein mono-ADP-ribosyltransferase PARP14 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2) (Poly [ADP-ribose] polymerase 14) (PARP-14)	NAD+ catabolic process [GO:0019677]; negative regulation of gene expression [GO:0010629]; negative regulation of type II interferon-mediated signaling pathway [GO:0060336]; negative regulation of tyrosine phosphorylation of STAT protein [GO:0042532]; positive regulation of interleukin-4-mediated signaling pathway [GO:1902216]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; protein poly-ADP-ribosylation [GO:0070212]	hit with GO BP
GN007392	Chromosome_2A	471	1	27	47.983014861995755	1.0189903846153847	0.7541478129713424	27	0	0.7541478129713424	27	0	NA	NA	NA	0.6339144215530903	35	0	unmethylated (<10%)	P60322	Nanos homolog 2 (NOS-2)	germ-line stem cell population maintenance [GO:0030718]; mRNA catabolic process [GO:0006402]; mRNA destabilization [GO:0061157]; negative regulation of meiotic nuclear division [GO:0045835]; negative regulation of translation [GO:0017148]; oogenesis [GO:0048477]; spermatogenesis [GO:0007283]	hit with GO BP
GN007393	Chromosome_2A	29346	23	262	32.38942274926736	0.34042781169172964	80.54566401340595	259	0.8841698841698842	81.95637805684072	26	0.8846153846153846	80.4242734459421	233	0.8841201716738197	44.677734375	36	0.5	methylated (>=50%)	Q5ZMW5	Rho GTPase-activating protein 26 (GTPase regulator associated with focal adhesion kinase) (Rho-type GTPase-activating protein 26)	mitophagy [GO:0000423]; signal transduction [GO:0007165]	hit with GO BP
GN007394	Chromosome_2A	11106	6	358	34.51287592292454	1.086033200928057	0.6374298827129016	352	0	0.18951358180669614	49	0	0.6876993973768167	303	0	0.3607937462417318	38	0	unmethylated (<10%)	Q6X1Y6	Acid-sensing ion channel 3 (ASIC3) (Amiloride-sensitive cation channel 3) (Dorsal root ASIC) (DRASIC)	detection of chemical stimulus involved in sensory perception [GO:0050907]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; detection of temperature stimulus involved in sensory perception [GO:0050961]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; membrane depolarization [GO:0051899]; monoatomic cation transport [GO:0006812]; monoatomic ion transmembrane transport [GO:0034220]; response to acidic pH [GO:0010447]; response to heat [GO:0009408]; response to mechanical stimulus [GO:0009612]; sensory perception of sour taste [GO:0050915]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]	hit with GO BP
GN007395	Chromosome_2A	3033	1	165	44.97197494230135	1.0775049090533277	0.4132231404958678	29	0	0.4132231404958678	29	0	NA	NA	NA	4.97219496238142	45	0.06666666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007396	Chromosome_2A	5818	4	43	34.204193881058785	0.2529562659693974	72.8731343283582	43	0.813953488372093	74.0702479338843	20	0.9	72.19626168224299	23	0.7391304347826086	60.3399433427762	12	0.6666666666666666	methylated (>=50%)	Q80WQ4	Probable tRNA methyltransferase 9B (Probable tRNA methyltransferase 9-like protein) (EC 2.1.1.-)	tRNA methylation [GO:0030488]	hit with GO BP
GN007397	Chromosome_2A	1095	1	19	35.79908675799087	0.5456762923912188	66.42857142857143	4	0.75	66.42857142857143	4	0.75	NA	NA	NA	73.89277389277389	17	0.8235294117647058	NA	NA	NA	NA	no Swiss-Prot hit
GN007398	Chromosome_2A	3442	7	109	35.7931435212086	0.9914013614070691	1.3901918976545842	105	0	1.6840171463563993	18	0	1.2767466603617448	87	0	1.6031350195938725	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007399	Chromosome_2A	426	1	22	46.713615023474176	0.9701863354037267	NA	0	NA	NA	NA	NA	NA	NA	NA	82.56638627742042	59	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018705	Chromosome_2A	480	1	16	38.333333333333336	0.9523809523809523	68.80341880341881	16	1	68.80341880341881	16	1	NA	NA	NA	88.18181818181819	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007400	Chromosome_2A	9715	9	310	36.798764796706124	0.942606377917662	1.7678546274123117	310	0	0.9775733179988499	52	0	1.8781603660004815	258	0	0.797702616464582	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007401	Chromosome_2A	2121	1	69	42.38566713814239	0.7250743162901307	0.4961411245865491	69	0	0.4961411245865491	69	0	NA	NA	NA	1.2448132780082988	29	0	unmethylated (<10%)	Q9BRZ2	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (RING finger protein 109) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; regulation of type I interferon production [GO:0032479]; response to type I interferon [GO:0034340]	hit with GO BP
GN007402	Chromosome_2A	26355	30	639	37.03661544298995	0.7105044927872646	0.6005128704515208	635	0	0.5883045064125191	182	0	0.6051640667025282	453	0	0.42689434364994666	54	0	unmethylated (<10%)	Q9R1X5	ATP-binding cassette sub-family C member 5 (EC 7.6.2.-) (EC 7.6.2.2) (Multi-specific organic anion transporter C) (MOAT-C) (Multidrug resistance-associated protein 5) (SMRP)	cAMP transport [GO:0070730]; cGMP transport [GO:0070731]; export across plasma membrane [GO:0140115]; folate transmembrane transport [GO:0098838]; glutathione transmembrane transport [GO:0034775]; heme transmembrane transport [GO:0035351]; hyaluronan biosynthetic process [GO:0030213]; purine nucleotide transport [GO:0015865]; xenobiotic transport [GO:0042908]	hit with GO BP
GN007403	Chromosome_2A	28384	16	371	35.26282412626832	0.4211040197066398	80.80930092103276	362	0.9613259668508287	89.6694214876033	20	1	80.23473926791361	342	0.9590643274853801	44.29065743944636	10	0.5	methylated (>=50%)	Q60997	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Apactin) (CRP-ductin) (Deleted in malignant brain tumors 1 protein) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)	antimicrobial humoral immune response mediated by antimicrobial peptide [GO:0061844]; blastocyst development [GO:0001824]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; induction of bacterial agglutination [GO:0043152]; inner cell mass cell proliferation [GO:0001833]; positive regulation of epithelial cell differentiation [GO:0030858]; receptor-mediated endocytosis [GO:0006898]; response to bacterium [GO:0009617]	hit with GO BP
GN007404	Chromosome_2A	900	1	12	44.666666666666664	0.267644726407613	77.99511002444987	12	0.8333333333333334	77.99511002444987	12	0.8333333333333334	NA	NA	NA	63.746630727762806	13	0.8461538461538461	methylated (>=50%)	P34586	Transient-receptor-potential-like protein (TRP homologous cation channel protein 1)	calcium ion transmembrane transport [GO:0070588]; regulation of cytosolic calcium ion concentration [GO:0051480]; single fertilization [GO:0007338]	hit with GO BP
GN007405	Chromosome_2A	21160	9	311	35.97353497164461	0.4579936127708949	91.89992748368383	254	0.952755905511811	87.96861377506539	20	0.95	92.25658467135965	234	0.9529914529914529	31.266607617360496	53	0.20754716981132076	methylated (>=50%)	P79797	Transcription factor IIIA (TFIIIA)	positive regulation of DNA-templated transcription [GO:0045893]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN007406	Chromosome_2A	14411	7	108	36.68725279300534	0.235224666679362	79.88042630621263	66	0.9545454545454546	95.6043956043956	2	1	79.49946751863685	64	0.953125	96.70588235294117	8	1	methylated (>=50%)	Q5F457	WW domain-binding protein 4 (WBP-4)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007407	Chromosome_2A	14484	20	114	35.95691797845899	0.2441060439743206	89.738522347218	106	0.9716981132075472	93.44086021505376	32	1	88.27893175074183	74	0.9594594594594594	89.02058640049907	26	0.9615384615384616	methylated (>=50%)	Q32N90	MBT domain-containing protein 1	double-strand break repair via homologous recombination [GO:0000724]; negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN007408	Chromosome_2A	1176	2	24	46.00340136054422	0.3859533967837217	1.0501750291715286	24	0	1.1844331641285957	16	0	0.7518796992481203	8	0	1.2987012987012987	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007409	Chromosome_2A	7531	16	44	35.46673748506174	0.1944261575597981	75.29865125240848	39	0.8717948717948718	75.69601203912717	22	0.8636363636363636	74.88151658767772	17	0.8823529411764706	2.1195824106295476	70	0	methylated (>=50%)	P54729	NEDD8 ultimate buster 1 (Negative regulator of ubiquitin-like proteins 1) (Protein BS4)	positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; proteasomal protein catabolic process [GO:0010498]; protein ubiquitination [GO:0016567]; regulation of ubiquitin-dependent protein catabolic process [GO:2000058]; response to tumor necrosis factor [GO:0034612]; response to type II interferon [GO:0034341]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007410	Chromosome_2A	7096	10	155	34.568771138669675	0.7311622094144081	0.6927564414195431	150	0	0.5755947812739831	69	0	0.7470651013874067	81	0	0.48800325335502237	39	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN007411	Chromosome_2A	11354	8	152	33.820679936586224	0.47110798581386815	89.16057710324152	152	0.993421052631579	90.23323615160349	13	1	89.08690428514217	139	0.9928057553956835	81.4930991217064	36	0.9722222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007412	Chromosome_2A	11804	6	124	35.496441884107085	0.3347395772943628	71.72805357402824	123	0.8130081300813008	92.3076923076923	9	1	69.99684343434343	114	0.7982456140350878	65.62778272484417	16	0.625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007413	Chromosome_2A	3106	7	25	34.41725692208628	0.2733673649005457	56.09436435124508	25	0.68	59.41807044410413	14	0.7142857142857143	53.608247422680414	11	0.6363636363636364	46.30261660978385	56	0.5	methylated (>=50%)	Q5SS90	Uncharacterized protein C7orf57 homolog	NA	hit, no GO BP
GN007414	Chromosome_2A	1899	3	47	35.17640863612428	0.8012874033774139	56.788132860367625	47	0.6382978723404256	34.51851851851852	12	0.3333333333333333	62.984336356141796	35	0.7428571428571429	31.899641577060933	23	0.34782608695652173	methylated (>=50%)	Q5BLD8	Protein N-lysine methyltransferase METTL21A (EC 2.1.1.-) (Methyltransferase-like protein 21A)	NA	hit, no GO BP
GN007415	Chromosome_2A	10027	8	126	35.68365413383864	0.3954814887159299	75.47476059081318	96	0.78125	60.191518467852255	19	0.5789473684210527	77.53222836095765	77	0.8311688311688312	58.901830282861894	13	0.5384615384615384	methylated (>=50%)	Q5ZHV5	2-oxoglutarate and iron-dependent oxygenase JMJD4 (EC 1.14.11.-) (JmjC domain-containing protein 4) (Jumonji domain-containing protein 4) (Lysyl-hydroxylase JMJD4)	positive regulation of translational termination [GO:0045905]; protein hydroxylation [GO:0018126]	hit with GO BP
GN007416	Chromosome_2A	18329	20	224	35.713896011784605	0.38373486723996253	72.31275227986247	212	0.8584905660377359	80.07075471698113	19	1	71.7877094972067	193	0.844559585492228	77.77777777777777	8	0.875	methylated (>=50%)	Q15042	Rab3 GTPase-activating protein catalytic subunit (RAB3 GTPase-activating protein 130 kDa subunit) (Rab3-GAP p130) (Rab3-GAP)	brain development [GO:0007420]; camera-type eye development [GO:0043010]; establishment of protein localization to endoplasmic reticulum membrane [GO:0097051]; excitatory postsynaptic potential [GO:0060079]; face morphogenesis [GO:0060325]; hypothalamus development [GO:0021854]; lipid droplet organization [GO:0034389]; positive regulation of autophagosome assembly [GO:2000786]; positive regulation of endoplasmic reticulum tubular network organization [GO:1903373]; positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization [GO:0061646]; positive regulation of protein lipidation [GO:1903061]; Rab protein signal transduction [GO:0032482]; regulation of calcium ion-dependent exocytosis of neurotransmitter [GO:1903233]; regulation of short-term neuronal synaptic plasticity [GO:0048172]	hit with GO BP
GN007417	Chromosome_2A	261	1	6	47.509578544061306	0.4142857142857143	0.5747126436781609	5	0	0.5747126436781609	5	0	NA	NA	NA	1.076555023923445	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007418	Chromosome_2A	240	1	5	43.75	0.43541364296081275	0	5	0	0	5	0	NA	NA	NA	0.6107717934480844	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007419	Chromosome_2A	456	1	16	44.29824561403509	0.7272727272727273	0.4716981132075472	16	0	0.4716981132075472	16	0	NA	NA	NA	0.3242241778601204	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007420	Chromosome_2A	9960	9	96	34.53815261044177	0.32373793803961404	73.76914210439651	96	0.8125	53.09090909090909	12	0.75	75.82835415535035	84	0.8214285714285714	36.930455635491604	12	0.4166666666666667	methylated (>=50%)	Q86WI1	Fibrocystin-L (Polycystic kidney and hepatic disease 1-like protein 1) (PKHD1-like protein 1)	immune response [GO:0006955]	hit with GO BP
GN007421	Chromosome_2A	3327	3	70	43.582807333934475	0.44456449325298125	49.18032786885246	5	0.6	49.18032786885246	5	0.6	NA	NA	NA	60.49618320610687	14	0.7142857142857143	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007422	Chromosome_2A	7505	3	165	34.25716189207195	0.7511355061615766	34.05565944340557	162	0.12345679012345678	3.672316384180791	24	0	36.62173446260289	138	0.14492753623188406	4.51107509454349	67	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007423	Chromosome_2A	261	1	8	47.509578544061306	0.5608380338436745	0.46296296296296297	8	0	0.46296296296296297	8	0	NA	NA	NA	1.0120481927710843	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016529	Chromosome_2A	256	1	15	43.75	1.294236602628918	0.9345794392523364	15	0	0.9345794392523364	15	0	NA	NA	NA	1.1051468266498263	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007424	Chromosome_2A	231	1	9	45.02164502164502	0.7926038886770873	2.7491408934707904	9	0	2.7491408934707904	9	0	NA	NA	NA	8.110516934046347	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007425	Chromosome_2A	288	1	5	43.05555555555556	0.3747072599531616	1	5	0	1	5	0	NA	NA	NA	0.3506311360448808	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007426	Chromosome_2A	1949	4	21	35.30015392508979	0.34704415954415957	2.5996533795493932	21	0	1.829268292682927	14	0	3.6144578313253013	7	0	0.7907979870596693	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007427	Chromosome_2A	7356	4	144	33.605220228384994	0.6939954544471794	0.5166846071044133	97	0	0.41981528127623846	18	0	0.5500868558193399	79	0	0.5301794453507341	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007428	Chromosome_2A	1947	4	21	35.130970724191066	0.3506513554539763	2.0881670533642693	21	0	2.8225806451612905	14	0	1.092896174863388	7	0	1.0556232237109215	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001761	Chromosome_2A	1914	4	20	35.10971786833856	0.3404028277977858	0.9316770186335404	17	0	1.0256410256410255	10	0	0.7874015748031497	7	0	1.267605633802817	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007429	Chromosome_2A	1290	1	31	53.72093023255814	0.33351125047954233	0	8	0	0	8	0	NA	NA	NA	1.589527816736793	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007430	Chromosome_2A	540	1	29	41.666666666666664	1.288888888888889	1.9756838905775076	28	0	1.9756838905775076	28	0	NA	NA	NA	0.5524861878453039	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007431	Chromosome_2A	519	1	19	43.54527938342967	0.7728056426332288	0.6507592190889371	15	0	0.6507592190889371	15	0	NA	NA	NA	1.1055276381909547	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007432	Chromosome_2A	994	3	26	38.53118712273642	0.72069157836029	0.782608695652174	26	0	0.9626955475330926	22	0	0.31347962382445144	4	0	0.5847953216374269	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007433	Chromosome_2A	1716	4	15	30.65268065268065	0.3723958333333333	21.301775147928993	15	0.06666666666666667	13.81578947368421	6	0	24.507042253521128	9	0.1111111111111111	2.3157894736842106	49	0.02040816326530612	sparse (10-50%)	Q96HV5	Transmembrane protein 41A	NA	hit, no GO BP
GN007434	Chromosome_2A	27911	12	451	34.473863351366845	0.5439848218434358	82.80109880676453	404	0.900990099009901	85.43758967001435	20	0.95	82.63330898466033	384	0.8984375	95.13513513513513	36	1	methylated (>=50%)	Q6GQB9	ER degradation-enhancing alpha-mannosidase-like protein 3 (EC 3.2.1.113) (Alpha-1,2-mannosidase EDEM3)	carbohydrate metabolic process [GO:0005975]; endoplasmic reticulum mannose trimming [GO:1904380]; endoplasmic reticulum unfolded protein response [GO:0030968]; ubiquitin-dependent glycoprotein ERAD pathway [GO:0097466]	hit with GO BP
GN007435	Chromosome_2A	168	1	3	49.404761904761905	0.3054545454545455	NA	0	NA	NA	NA	NA	NA	NA	NA	2.738336713995943	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007436	Chromosome_2A	357	1	16	46.21848739495798	0.8589473684210527	0.3372681281618887	14	0	0.3372681281618887	14	0	NA	NA	NA	0.999259807549963	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007437	Chromosome_2A	6535	3	175	38.22494261667942	0.733736379081143	0.7086715629429198	175	0	0.6901561932437341	78	0	0.7188498402555911	97	0	0.25023459493274947	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007438	Chromosome_2A	699	1	18	47.06723891273248	0.46593097318915716	1.25	16	0	1.25	16	0	NA	NA	NA	0.4132231404958678	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007439	Chromosome_2A	3063	1	104	41.429970617042116	0.7969219068966897	1.1420740063956145	104	0	1.1420740063956145	104	0	NA	NA	NA	0.54216867469879515	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007440	Chromosome_2A	17657	12	195	34.07147307017047	0.3832043247776894	87.91690626797009	193	0.9585492227979274	87.2257053291536	20	0.9	87.98670465337132	173	0.9653179190751445	56.01317957166392	53	0.5660377358490566	methylated (>=50%)	Q5ZLF0	Hsc70-interacting protein (Hip) (Protein FAM10A1) (Protein ST13 homolog)	protein folding [GO:0006457]	hit with GO BP
GN007441	Chromosome_2A	798	1	23	44.235588972431074	0.59375	2.3054755043227666	20	0	2.3054755043227666	20	0	NA	NA	NA	1.7872102764590896	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007442	Chromosome_2A	23106	14	291	35.008222972388126	0.41193857686052976	75.24965836224115	291	0.8281786941580757	82.53588516746412	60	0.85	73.69595714832292	231	0.8225108225108225	86.7579908675799	26	0.9615384615384616	methylated (>=50%)	B5DEQ3	Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3)	glomerular filtration [GO:0003094]; protein processing [GO:0016485]; proteolysis [GO:0006508]	hit with GO BP
GN007443	Chromosome_2A	10986	11	90	33.71563808483525	0.2896540814174225	90.88211046990932	90	0.9666666666666667	93.32220367278798	12	0.9166666666666666	90.61470911086718	78	0.9743589743589743	83.33333333333333	8	1	methylated (>=50%)	Q5ZLM0	Parafibromin (Cell division cycle protein 73 homolog)	endodermal cell fate commitment [GO:0001711]; mRNA 3'-end processing [GO:0031124]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; negative regulation of myeloid cell differentiation [GO:0045638]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell cycle G1/S phase transition [GO:1902808]; positive regulation of mRNA 3'-end processing [GO:0031442]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; positive regulation of Wnt signaling pathway [GO:0030177]; stem cell population maintenance [GO:0019827]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN007444	Chromosome_2A	6896	4	53	36.122389791183295	0.23636293086723145	80.73234524847427	53	0.9056603773584906	75.86206896551724	6	0.8333333333333334	81.28031037827353	47	0.9148936170212766	91.3125	26	1	methylated (>=50%)	O95336	6-phosphogluconolactonase (6PGL) (EC 3.1.1.31)	carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098]; pentose-phosphate shunt, oxidative branch [GO:0009051]	hit with GO BP
GN007445	Chromosome_2A	16689	10	277	34.26208880100665	0.5658132198880308	81.69347209082308	277	0.9133574007220217	56.80672268907563	10	0.7	82.41421270382088	267	0.9213483146067416	1.647875108412836	20	0.05	methylated (>=50%)	P50613	Cyclin-dependent kinase 7 (EC 2.7.11.22) (EC 2.7.11.23) (39 kDa protein kinase) (p39 Mo15) (CDK-activating kinase 1) (Cell division protein kinase 7) (Serine/threonine-protein kinase 1) (TFIIH basal transcription factor complex kinase subunit)	nucleotide-excision repair [GO:0006289]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein stabilization [GO:0050821]; regulation of cell cycle [GO:0051726]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; snRNA transcription by RNA polymerase II [GO:0042795]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN007446	Chromosome_2A	1277	2	52	41.03367267032107	0.9677203107011177	0.4487658937920718	52	0	0.5154639175257731	36	0	0.3232758620689655	16	0	0.3412969283276451	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007447	Chromosome_2A	8646	6	187	35.86629655331945	0.6725633751258351	1.4066496163682864	187	0	0.7874015748031497	16	0	1.4613778705636744	171	0	0.3778544438968293	54	0	unmethylated (<10%)	Q9P0M2	A-kinase anchor protein 7 isoform gamma (AKAP-7 isoform gamma) (A-kinase anchor protein 18 kDa) (AKAP 18) (Protein kinase A-anchoring protein 7 isoform gamma) (PRKA7 isoform gamma)	modulation of chemical synaptic transmission [GO:0050804]	hit with GO BP
GN007448	Chromosome_2A	372	1	9	43.54838709677419	0.5122399020807834	0	9	0	0	9	0	NA	NA	NA	0.49800796812749004	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007449	Chromosome_2A	648	1	28	43.67283950617284	0.9133192389006343	1.5625	28	0	1.5625	28	0	NA	NA	NA	0.24045686804929367	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002696	Chromosome_2A	1281	4	20	43.169398907103826	0.345748987854251	0.3003003003003003	20	0	0.3968253968253968	15	0	0	5	0	0.46888320545609546	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007450	Chromosome_2A	1997	4	79	48.92338507761642	0.6682550978049999	0.4431314623338257	79	0	0.38412291933418696	67	0	0.821917808219178	12	0	0.684931506849315	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007451	Chromosome_2A	907	2	30	39.140022050716645	0.8651828298887122	0.9743135518157662	30	0	0.9063444108761329	27	0	1.4705882352941178	3	0	0.4633651896901245	66	0	unmethylated (<10%)	Q5HZL5	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A (EC 2.4.1.206) (Lactotriaosylceramide synthase A) (Lc(3)Cer synthase A) (Lc3 synthase A) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5A) (BGnT-5A) (Beta-1,3-Gn-T5A) (Beta-1,3-N-acetylglucosaminyltransferase 5A) (Beta3Gn-T5A)	protein O-linked glycosylation [GO:0006493]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN007452	Chromosome_2A	4238	6	65	34.04907975460123	0.5344262295081967	64.72379295345803	65	0.676923076923077	64.53382084095064	9	0.5555555555555556	64.7494445815848	56	0.6964285714285714	0.6028131279303416	60	0	methylated (>=50%)	O61491	Flotillin-1	positive regulation of endocytosis [GO:0045807]; protein localization to plasma membrane [GO:0072659]; regulation of receptor internalization [GO:0002090]	hit with GO BP
GN007453	Chromosome_2A	4102	7	70	36.786933203315456	0.509100837922463	91.84585905897382	70	1	93.9119170984456	13	1	91.43949044585987	57	1	82.07217694994179	11	0.9090909090909091	methylated (>=50%)	O61491	Flotillin-1	positive regulation of endocytosis [GO:0045807]; protein localization to plasma membrane [GO:0072659]; regulation of receptor internalization [GO:0002090]	hit with GO BP
GN007454	Chromosome_2A	12959	8	165	35.9749980708388	0.39391002447942536	65.47909244327771	115	0.7478260869565218	80.51948051948052	59	0.9152542372881356	50.11372251705838	56	0.5714285714285714	39.43089430894309	11	0.18181818181818182	methylated (>=50%)	Q58DL5	Breast cancer anti-estrogen resistance protein 3 homolog	endothelin receptor signaling pathway [GO:0086100]; epidermal growth factor receptor signaling pathway [GO:0007173]; insulin receptor signaling pathway [GO:0008286]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of GTPase activity [GO:0043547]; positive regulation of MAPK cascade [GO:0043410]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN007455	Chromosome_2A	4686	7	33	35.253947930004266	0.22681110954660658	70.86521483225427	33	0.7272727272727273	71.52391546162403	19	0.6842105263157895	70.125	14	0.7857142857142857	56.17732558139535	20	0.4	methylated (>=50%)	Q9Y113	Negative elongation factor B	negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN007456	Chromosome_2A	14762	2	122	35.61847988077496	0.2622913860680148	37.63210292540971	122	0.29508196721311475	74.04809619238478	30	0.9333333333333333	21.597176262960513	92	0.08695652173913043	14.018691588785046	2	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007457	Chromosome_2A	324	2	5	36.111111111111114	0.47423887587822017	NA	0	NA	NA	NA	NA	NA	NA	NA	80.43478260869566	3	1	NA	NA	NA	NA	no Swiss-Prot hit
GN007458	Chromosome_2A	2536	2	21	33.714511041009466	0.2916538882803943	65.40925266903915	21	0.8095238095238095	59.701492537313435	5	0.8	67.19626168224299	16	0.8125	31.635802469135804	8	0.125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007459	Chromosome_2A	1457	3	6	31.64035689773507	0.16560581950443282	52.33160621761658	6	0.5	62.8099173553719	4	0.5	34.72222222222222	2	0.5	49.29388029589778	21	0.3333333333333333	methylated (>=50%)	Q704S8	Carnitine O-acetyltransferase (Carnitine acetylase) (EC 2.3.1.137) (EC 2.3.1.7) (Carnitine acetyltransferase) (CAT) (CrAT)	carnitine metabolic process, CoA-linked [GO:0019254]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid metabolic process [GO:0006631]; medium-chain fatty acid metabolic process [GO:0051791]; short-chain fatty acid metabolic process [GO:0046459]	hit with GO BP
GN007460	Chromosome_2A	8480	9	97	35.57783018867924	0.36383420101644987	82.68147432802189	97	0.9278350515463918	92.04988308651598	24	1	80.24340770791075	73	0.9041095890410958	75.18463810930577	12	0.9166666666666666	methylated (>=50%)	P52826	Carnitine O-acetyltransferase (Carnitine acetylase) (EC 2.3.1.137) (EC 2.3.1.7) (Carnitine acetyltransferase) (CAT) (CrAT)	carnitine metabolic process, CoA-linked [GO:0019254]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; medium-chain fatty acid metabolic process [GO:0051791]; short-chain fatty acid metabolic process [GO:0046459]	hit with GO BP
GN007461	Chromosome_2A	26944	11	358	36.77627672209026	0.3934398413376401	82.36378422336676	316	0.9145569620253164	69.52054794520548	8	0.625	82.57037404285794	308	0.922077922077922	0.7808433107756377	66	0	methylated (>=50%)	Q5U3U0	Phytanoyl-CoA dioxygenase domain-containing protein 1 (Protein PHYHD1) (EC 1.14.11.-)	oxidative RNA demethylation [GO:0035513]	hit with GO BP
GN007462	Chromosome_2A	333	1	18	46.546546546546544	0.998001998001998	0.76103500761035	18	0	0.76103500761035	18	0	NA	NA	NA	0.6756756756756757	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007463	Chromosome_2A	1098	1	25	38.9799635701275	0.6027667984189723	0.7524454477050414	25	0	0.7524454477050414	25	0	NA	NA	NA	0.5107832009080591	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007464	Chromosome_2A	5344	3	56	33.794910179640716	0.3718489065606362	88.64904195973806	55	0.9090909090909091	80.03273322422258	9	0.7777777777777778	90.14806378132118	46	0.9347826086956522	0.9691629955947136	44	0	methylated (>=50%)	Q9IA76	Large ribosomal subunit protein eL31 (60S ribosomal protein L31)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN007465	Chromosome_2A	372	1	14	42.473118279569896	0.8346153846153846	0.8130081300813008	14	0	0.8130081300813008	14	0	NA	NA	NA	0.6341154090044389	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007466	Chromosome_2A	462	1	25	45.67099567099567	1.0576923076923077	0	17	0	0	17	0	NA	NA	NA	0.4712939160239931	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007467	Chromosome_2A	9979	4	162	34.191802785850285	0.5566728511630021	87.42582650466234	162	0.9876543209876543	88.78990348923534	27	1	87.22761596548004	135	0.9851851851851852	86.99349674837418	25	0.92	methylated (>=50%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007468	Chromosome_2A	1352	4	37	41.34615384615385	0.6470740414963523	0.4284490145672665	37	0	0.47573739295908657	33	0	0	4	0	2.050194414987628	53	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007469	Chromosome_2A	18010	16	465	35.60799555802332	0.8148750342991588	0.529678149765486	465	0	0.5408328826392644	107	0	0.5264529580401355	358	0	3.5696329813976875	54	0	unmethylated (<10%)	P42263	Glutamate receptor 3 (GluR-3) (AMPA-selective glutamate receptor 3) (GluR-C) (GluR-K3) (Glutamate receptor ionotropic, AMPA 3)	glutamate receptor signaling pathway [GO:0007215]; long-term synaptic potentiation [GO:0060291]; modulation of chemical synaptic transmission [GO:0050804]; protein heterotetramerization [GO:0051290]; protein homotetramerization [GO:0051289]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN007470	Chromosome_2A	71756	24	924	33.66408383967891	0.45502323806475403	75.24055580397807	909	0.8778877887788779	71.82946573124663	30	0.8	75.34855112083106	879	0.8805460750853242	58.13953488372093	13	0.38461538461538464	methylated (>=50%)	P14099	cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE)	cellular response to cGMP [GO:0071321]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to macrophage colony-stimulating factor stimulus [GO:0036006]; cellular response to mechanical stimulus [GO:0071260]; cGMP catabolic process [GO:0046069]; establishment of endothelial barrier [GO:0061028]; GMP catabolic process [GO:0046038]; negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0106072]; negative regulation of cAMP/PKA signal transduction [GO:0141162]; negative regulation of receptor guanylyl cyclase signaling pathway [GO:0010754]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of vascular permeability [GO:0043116]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of vascular permeability [GO:0043117]; regulation of mitochondrion organization [GO:0010821]; signal transduction [GO:0007165]	hit with GO BP
GN007471	Chromosome_2A	1335	2	53	43.07116104868914	0.8790096156235248	0.4421983575489577	53	0	0.3994673768308921	51	0	1.2345679012345678	2	0	45.99236641221374	49	0.5102040816326531	unmethylated (<10%)	A6Q9N6	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase)	1,6-anhydro-N-acetyl-beta-muramic acid catabolic process [GO:0097175]; amino sugar metabolic process [GO:0006040]; peptidoglycan turnover [GO:0009254]	hit with GO BP
GN007472	Chromosome_2A	1122	1	38	39.3048128342246	0.8807271224953522	2.6992287917737787	38	0	2.6992287917737787	38	0	NA	NA	NA	10.093652445369408	39	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN007473	Chromosome_2A	30428	14	796	35.46404627316945	0.8320587027879358	3.9536581345515343	775	0	1.0418445772843723	129	0	4.419316071233475	646	0	0.8956386292834891	44	0	unmethylated (<10%)	Q6NTV6	Inverted formin-2	actin cytoskeleton organization [GO:0030036]	hit with GO BP
GN007474	Chromosome_2A	2118	1	25	39.2823418319169	0.3074645065760822	62.5	25	0.64	62.5	25	0.64	NA	NA	NA	1.5156618390030314	58	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007475	Chromosome_2A	13093	17	152	34.13274268693195	0.39909117707809016	78.56335906608925	151	0.9072847682119205	73.47195967233775	25	0.84	79.45766463752075	126	0.9206349206349206	29.41176470588235	25	0.36	methylated (>=50%)	Q9QZD5	Rab proteins geranylgeranyltransferase component A 2 (Choroideremia-like protein) (Rab escort protein 2) (REP-2)	intracellular protein transport [GO:0006886]; protein geranylgeranylation [GO:0018344]; protein targeting to membrane [GO:0006612]; small GTPase-mediated signal transduction [GO:0007264]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN007476	Chromosome_2A	16508	26	157	33.35352556336322	0.3422990583380318	81.0391552191384	157	0.9681528662420382	86.18384401114206	31	1	80.00224567707164	126	0.9603174603174603	11.204234671371857	32	0.09375	methylated (>=50%)	Q5F361	TBC domain-containing protein kinase-like protein (FERRY endosomal RAB5 effector complex subunit 1)	NA	hit, no GO BP
GN007477	Chromosome_2A	1790	6	12	35.47486033519553	0.21609657947686117	78.71362940275651	12	0.9166666666666666	82.3529411764706	4	1	77.25321888412017	8	0.875	60.269192422731805	30	0.7333333333333333	methylated (>=50%)	P30919	N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC 3.5.1.26) (Aspartylglucosaminidase) (AGA) (Glycosylasparaginase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) [Cleaved into: Glycosylasparaginase alpha chain; Glycosylasparaginase beta chain]	protein deglycosylation [GO:0006517]	hit with GO BP
GN007478	Chromosome_2A	2922	6	26	35.93429158110883	0.2761654113473115	65.80478345184227	26	0.6153846153846154	65.41353383458646	6	0.6666666666666666	65.94076655052265	20	0.6	53.8783093358105	33	0.6060606060606061	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007479	Chromosome_2A	987	1	35	41.03343465045592	0.8539328620161171	0.5124450951683748	35	0	0.5124450951683748	35	0	NA	NA	NA	1.8351577591757888	51	0	unmethylated (<10%)	O01346	Glycolipid beta-1,4-mannosyltransferase egh (EC 2.4.1.-) (GDP-Man:beta-Glc beta1,4-Mannosyl transferase) (Protein egghead) (Protein zeste-white 4)	arthro-series glucosylceramide biosynthetic process [GO:0140269]; axon guidance [GO:0007411]; border follicle cell migration [GO:0007298]; cell fate commitment [GO:0045165]; follicle cell of egg chamber development [GO:0030707]; follicle cell of egg chamber-cell adhesion [GO:0007299]; germ cell development [GO:0007281]; germarium-derived egg chamber formation [GO:0007293]; insect visual primordium formation [GO:0001744]; maintenance of polarity of follicular epithelium [GO:0042248]; male courtship behavior [GO:0008049]; morphogenesis of follicular epithelium [GO:0016333]; negative regulation of female receptivity, post-mating [GO:0045434]; oocyte localization involved in germarium-derived egg chamber formation [GO:0030720]; oocyte microtubule cytoskeleton organization [GO:0016325]; peripheral nervous system neuron development [GO:0048935]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN007480	Chromosome_2A	5188	16	166	37.7023901310717	0.9005484594511223	0.6800941668846455	166	0	0.5986530306809679	91	0	0.769865273577124	75	0	0.4389465283320032	35	0	unmethylated (<10%)	Q7T2C4	Prestin (Solute carrier family 26 member 5)	chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; oxalate transport [GO:0019532]; regulation of membrane potential [GO:0042391]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN007481	Chromosome_2A	831	1	35	56.438026474127554	0.529029793735676	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9628610729023384	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007482	Chromosome_2A	731	3	25	36.11491108071135	1.0503477211333985	0.39777247414478917	25	0	0.46860356138706655	22	0	0	3	0	0.4433696090286175	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007483	Chromosome_2A	18373	10	446	35.16573232460676	0.785252351677256	0.6136276473345549	446	0	0.897052541648868	60	0	0.5822209599545584	386	0	18.957011980267794	19	0.21052631578947367	unmethylated (<10%)	P86862	KappaPI-actitoxin-Ael3a (KappaPI-AITX-Ael3a) (Kunitz-type serine protease inhibitor APEKTx1)	NA	hit, no GO BP
GN007484	Chromosome_2A	2477	7	74	38.51433185304804	0.8060314500809118	0.37271710771524413	74	0	0.42796005706134094	57	0	0.1724137931034483	17	0	0.836382645060115	45	0	unmethylated (<10%)	B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Skeletal organic matrix MAM and LDL-receptor 2) (SOM MAM and LDL-receptor 2)	NA	hit, no GO BP
GN007485	Chromosome_2A	5048	7	142	37.85657686212361	0.7853194123382671	0.5314589405108864	141	0	0.6760019314340898	62	0	0.45188729399255717	79	0	0.5565319273579379	55	0	unmethylated (<10%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN007486	Chromosome_2A	448	2	14	37.276785714285715	0.9140192363742349	0.5434782608695652	14	0	0.7575757575757576	12	0	0	2	0	0.5275304978569073	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007487	Chromosome_2A	16503	5	423	34.95728049445555	0.839003474630152	2.5411630341676976	419	0.021479713603818614	0.65625	92	0	2.8797574941057595	327	0.027522935779816515	0.5054334091483447	68	0	unmethylated (<10%)	P51521	Transcriptional regulator ovo (Transcriptional repressor shavenbaby) (Transcriptional repressor svb) [Cleaved into: Transcriptional activator shavenbaby (Transcriptional activator svb)]	adult feeding behavior [GO:0008343]; cuticle pattern formation [GO:0035017]; cuticle pigmentation [GO:0048067]; cytoskeleton organization [GO:0007010]; epidermal cell differentiation [GO:0009913]; germ-line sex determination [GO:0018992]; imaginal disc-derived leg joint morphogenesis [GO:0016348]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; non-sensory hair organization [GO:0035316]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; regulation of transcription by RNA polymerase II [GO:0006357]; transposition [GO:0032196]	hit with GO BP
GN007488	Chromosome_2A	1464	4	32	37.568306010928964	0.6208651399491094	1.2217470983506413	32	0	1.1342155009451795	22	0	1.381692573402418	10	0	0.950950950950951	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003129	Chromosome_2A	1015	2	26	42.16748768472906	0.5764525993883792	0.7736943907156673	20	0	0.7952286282306164	19	0	0	1	0	0.7713073659853451	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007489	Chromosome_2A	18226	6	302	35.164051355206844	0.5370631756036172	79.35203712376006	301	0.9102990033222591	75.73529411764706	51	0.8823529411764706	79.77282448552826	250	0.916	43.977976600137644	24	0.5	methylated (>=50%)	Q8K2Y0	ORC ubiquitin ligase 1 (OBI1) (EC 2.3.2.27) (RING finger protein 219)	positive regulation of mRNA splicing, via spliceosome [GO:0048026]; protein autoubiquitination [GO:0051865]; protein monoubiquitination [GO:0006513]; regulation of DNA replication [GO:0006275]	hit with GO BP
GN007490	Chromosome_2A	23271	18	318	36.32847750418976	0.4148011154966866	90.09186351706036	103	0.970873786407767	93.11334289813486	14	1	89.70179662900537	89	0.9662921348314607	87.5	1	1	methylated (>=50%)	Q5T8P6	RNA-binding protein 26 (CTCL tumor antigen se70-2) (RNA-binding motif protein 26)	RNA catabolic process [GO:0006401]	hit with GO BP
GN007491	Chromosome_2A	1443	4	15	38.66943866943867	0.2780811182342588	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q5T8P6	RNA-binding protein 26 (CTCL tumor antigen se70-2) (RNA-binding motif protein 26)	RNA catabolic process [GO:0006401]	hit with GO BP
GN007492	Chromosome_2A	381	1	20	49.343832020997375	0.8624787775891342	0.42016806722689076	20	0	0.42016806722689076	20	0	NA	NA	NA	0.6719367588932806	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007493	Chromosome_2A	412	2	3	38.349514563106794	0.19855421686746988	0.8620689655172413	3	0	0.8620689655172413	3	0	NA	NA	NA	2.459016393442623	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007494	Chromosome_2A	471	1	20	44.5859872611465	0.8563636363636363	0.9036144578313253	20	0	0.9036144578313253	20	0	NA	NA	NA	13.278319579894974	71	0.07042253521126761	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007495	Chromosome_2A	2431	3	87	37.39201974496092	1.0238514789175581	0.5768063145112325	86	0	0.4169148302561048	40	0	0.7430340557275542	46	0	0.8979206049149339	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007496	Chromosome_2A	3545	4	82	36.41748942172073	0.6992110453648915	0.6433166547533953	79	0	0.8316008316008316	28	0	0.48394192696876376	51	0	0.4262295081967213	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011479	Chromosome_2A	212	1	1	41.509433962264154	0.11157894736842106	0	1	0	0	1	0	NA	NA	NA	0	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007497	Chromosome_2A	465	1	17	42.795698924731184	0.8043345543345544	0.17064846416382254	17	0	0.17064846416382254	17	0	NA	NA	NA	0.7255936675461742	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007498	Chromosome_2A	240	1	9	41.25	0.8859721082854799	1.3020833333333333	9	0	1.3020833333333333	9	0	NA	NA	NA	1.0672358591248665	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007499	Chromosome_2A	2017	2	37	32.82102131879028	0.6813878110020544	0.528169014084507	37	0	0.2915451895043732	11	0	0.5702436495593571	26	0	0.56657223796034	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007500	Chromosome_2A	522	1	24	43.86973180076628	0.9586776859504132	0.43103448275862066	24	0	0.43103448275862066	24	0	NA	NA	NA	1.6675632060247445	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007501	Chromosome_2A	3924	2	81	33.00203873598369	0.7581143740340031	1.0231148162182644	80	0	0.7932011331444759	37	0	1.138627953316254	43	0	0.4915102770330652	64	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN007502	Chromosome_2A	1386	1	32	38.74458874458875	0.6274509803921569	0.8460236886632826	16	0	0.8460236886632826	16	0	NA	NA	NA	0.34429992348890587	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007503	Chromosome_2A	1052	3	35	42.01520912547529	0.7538902538902539	16.264722378014582	35	0	15.270018621973929	34	0	25.58139534883721	1	0	3.8365304420350292	49	0	sparse (10-50%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN007504	Chromosome_2A	16776	19	437	35.580591320934666	0.8234974574300666	0.8862565388439756	427	0	0.5910165484633569	131	0	1.0083725478213041	296	0	0.26682478505781204	55	0	unmethylated (<10%)	P98164	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)	amyloid-beta clearance [GO:0097242]; cellular response to growth factor stimulus [GO:0071363]; cobalamin transport [GO:0015889]; coronary artery morphogenesis [GO:0060982]; endocytosis [GO:0006897]; folate import across plasma membrane [GO:1904447]; lipid metabolic process [GO:0006629]; male gonad development [GO:0008584]; metal ion transport [GO:0030001]; negative regulation of apoptotic process [GO:0043066]; negative regulation of BMP signaling pathway [GO:0030514]; neural tube closure [GO:0001843]; neuron projection arborization [GO:0140058]; outflow tract septum morphogenesis [GO:0003148]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of lysosomal protein catabolic process [GO:1905167]; positive regulation of neurogenesis [GO:0050769]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; protein transport [GO:0015031]; pulmonary artery morphogenesis [GO:0061156]; receptor-mediated endocytosis [GO:0006898]; response to leptin [GO:0044321]; retinoid metabolic process [GO:0001523]; secondary heart field specification [GO:0003139]; sensory perception of sound [GO:0007605]; transcytosis [GO:0045056]; transport across blood-brain barrier [GO:0150104]; vagina development [GO:0060068]; ventricular compact myocardium morphogenesis [GO:0003223]; vitamin D metabolic process [GO:0042359]	hit with GO BP
GN007505	Chromosome_2A	632	2	29	44.936708860759495	0.9093525179856116	0.5336179295624333	29	0	0.5506607929515418	28	0	0	1	0	0.8406078241189784	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007506	Chromosome_2A	9212	7	249	35.735996526270085	0.8502227871129303	0.7162900605523557	245	0	0.5660377358490566	54	0	0.7528461255967682	191	0	0.8478357875948237	37	0	unmethylated (<10%)	Q8NFW1	Collagen alpha-1(XXII) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN003046	Chromosome_2A	569	2	8	53.251318101933215	0.2001582974232697	0	1	0	0	1	0	NA	NA	NA	0.4088050314465409	91	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007507	Chromosome_2A	1273	3	22	34.09269442262372	0.5948598130841122	53.23854660347551	16	0.4375	56.319702602230485	15	0.4666666666666667	35.78947368421053	1	0	65.3061224489796	69	0.6376811594202898	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020463	Chromosome_2A	1533	3	12	34.37703848662753	0.26612273240170126	41.08108108108108	11	0.2727272727272727	25.49800796812749	6	0	53.94736842105263	5	0.6	27.714748784440843	37	0.1891891891891892	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007508	Chromosome_2A	6723	9	244	38.03361594526253	1.0046373190269715	3.072132848988064	244	0	0.948509485094851	29	0	3.456305919843118	215	0	0.6673691605198454	48	0	unmethylated (<10%)	Q7WHJ0	Ectoine dioxygenase (EC 1.14.11.55) (Ectoine hydroxylase)	ectoine catabolic process [GO:0042400]	hit with GO BP
GN007509	Chromosome_2A	1247	2	56	44.18604651162791	0.9204165019111639	0.6285714285714286	56	0	0.5411906193625977	54	0	2.2988505747126435	2	0	0.3740065451145395	40	0	unmethylated (<10%)	O14082	Uncharacterized protein UNK4.17	NA	hit, no GO BP
GN007510	Chromosome_2A	2315	3	36	39.39524838012959	0.40135422134680493	84.93222106360793	36	0.9722222222222222	81.13821138211382	18	1	86.72294704528012	18	0.9444444444444444	68.34319526627219	12	0.5833333333333334	methylated (>=50%)	Q5EA50	Rab9 effector protein with kelch motifs	NA	hit, no GO BP
GN007511	Chromosome_2A	9094	2	136	32.31801187596217	0.5784067419303546	76.24309392265194	106	0.8018867924528302	90.52369077306733	14	0.9285714285714286	74.35813034891376	92	0.782608695652174	70.98017621145374	51	0.6862745098039216	methylated (>=50%)	O43543	DNA repair protein XRCC2 (X-ray repair cross-complementing protein 2)	centrosome cycle [GO:0007098]; DNA repair [GO:0006281]; DNA strand invasion [GO:0042148]; double-strand break repair via homologous recombination [GO:0000724]; meiotic cell cycle [GO:0051321]; mitotic cell cycle [GO:0000278]; supramolecular fiber organization [GO:0097435]	hit with GO BP
GN007512	Chromosome_2A	2605	5	33	33.243761996161226	0.46169834526539666	84.10110069302894	33	1	79.74683544303798	6	1	84.74496958352832	27	1	81.2769628990509	16	0.875	methylated (>=50%)	Q28CB1	TBC1 domain family member 2B	NA	hit, no GO BP
GN007513	Chromosome_2A	3360	3	34	35.714285714285715	0.3176518675671993	67.37668161434978	34	0.8529411764705882	73.08970099667773	30	0.9666666666666667	36.55913978494624	4	0	41.7298937784522	11	0.2727272727272727	methylated (>=50%)	Q5M8C6	Fibrinogen-like protein 1	adipose tissue development [GO:0060612]; blood coagulation [GO:0007596]; cholesterol metabolic process [GO:0008203]; hepatocyte proliferation [GO:0072574]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; regulation of glucose metabolic process [GO:0010906]; regulation of immune response [GO:0050776]; response to stilbenoid [GO:0035634]	hit with GO BP
GN007514	Chromosome_2A	19790	12	221	32.04143506821627	0.4353274140242317	65.07307744843601	205	0.6731707317073171	68.11692726036709	30	0.8	64.73312580669653	175	0.6514285714285715	49.47643979057592	12	0.4166666666666667	methylated (>=50%)	Q9UPU7	TBC1 domain family member 2B	endocytosis [GO:0006897]	hit with GO BP
GN007515	Chromosome_2A	12911	9	397	38.21547517620633	0.843524998416025	2.2354599026389956	395	0	1.1029411764705883	61	0	2.4460650258280157	334	0	39.02621722846442	32	0.6875	unmethylated (<10%)	Q503M4	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN007516	Chromosome_2A	21102	15	235	34.30954411904085	0.37929654025003895	84.59434214037897	220	0.9545454545454546	73.11197916666667	26	0.8076923076923077	85.90544157002677	194	0.9742268041237113	0.4732435384055333	56	0	methylated (>=50%)	A5PK45	Procollagen galactosyltransferase 1 (EC 2.4.1.50) (Collagen beta(1-O)galactosyltransferase 1) (Glycosyltransferase 25 family member 1) (Hydroxylysine galactosyltransferase 1)	positive regulation of collagen fibril organization [GO:1904028]; protein O-linked glycosylation via galactose [GO:0180062]	hit with GO BP
GN007517	Chromosome_2A	13317	5	197	35.173087031613726	0.4782990926999401	79.82539682539682	197	0.9137055837563451	88.60759493670886	6	1	79.54117165096272	191	0.9109947643979057	1.0459469555472545	61	0	methylated (>=50%)	B5X601	DNA repair protein SWI5 homolog (Protein SAE3 homolog)	double-strand break repair via homologous recombination [GO:0000724]	hit with GO BP
GN007518	Chromosome_2A	4413	3	59	38.6585089508271	0.3703866507340389	96.38978573525095	59	1	96.38978573525095	59	1	NA	NA	NA	91.21540312876053	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007519	Chromosome_2A	54680	55	714	36.78310168251646	0.3876877700154092	75.36129989844544	698	0.8925501432664756	74.4450460205739	172	0.8953488372093024	75.57955827825246	526	0.8916349809885932	77.82101167315174	11	0.9090909090909091	methylated (>=50%)	Q8BLN6	Protein unc-80 homolog (mUNC-80)	monoatomic cation homeostasis [GO:0055080]; regulation of neuronal action potential [GO:0098908]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN007520	Chromosome_2A	5491	7	65	33.090511746494265	0.43305362165152844	62.05156950672646	65	0.7230769230769231	60.51502145922747	22	0.6818181818181818	62.79650436953808	43	0.7441860465116279	8.316831683168317	41	0.024390243902439025	methylated (>=50%)	A9JS51	Ciliary microtubule inner protein 2B	NA	hit, no GO BP
GN007521	Chromosome_2A	29477	16	285	33.38195881534756	0.34740846516863066	68.82361091866426	236	0.8516949152542372	39.225655064528745	40	0.6	75.19575650416772	196	0.9030612244897959	17.4468085106383	34	0.11764705882352941	methylated (>=50%)	P69744	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Calcium transport protein 2) (CaT2) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)	calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; calcium ion transport into cytosol [GO:0060402]; intracellular calcium ion homeostasis [GO:0006874]; protein homotetramerization [GO:0051289]; regulation of urine volume [GO:0035809]	hit with GO BP
GN007522	Chromosome_2A	21644	17	314	35.27536499722787	0.4669438834562698	87.50889679715303	280	0.9678571428571429	90.87058823529412	38	1	87.02409229725144	242	0.9628099173553719	55.575127708296634	63	0.5555555555555556	methylated (>=50%)	Q26626	Kinesin-associated protein 3 (SpKAP115)	cilium organization [GO:0044782]; microtubule-based movement [GO:0007018]; microtubule-based process [GO:0007017]	hit with GO BP
GN007523	Chromosome_2A	11194	4	183	33.634089690905846	0.5785725300752921	78.53468967882044	182	0.8956043956043956	80.78947368421052	6	0.8333333333333334	78.48463605561398	176	0.8977272727272727	46.143008101444174	45	0.6	methylated (>=50%)	Q6GLB0	E3 ubiquitin-protein ligase PPP1R11 (EC 2.3.2.27) (Protein phosphatase 1 regulatory subunit 11)	defense response to Gram-positive bacterium [GO:0050830]; negative regulation of cytokine production [GO:0001818]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007524	Chromosome_2A	1006	2	36	40.95427435387674	0.8535067873303167	0.2081165452653486	36	0	0.11764705882352941	31	0	0.9009009009009009	5	0	0.7244277021153289	64	0	unmethylated (<10%)	Q9N2A3	Muscarinic acetylcholine receptor M3	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; G protein-coupled acetylcholine receptor signaling pathway [GO:0007213]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of smooth muscle contraction [GO:0045987]; saliva secretion [GO:0046541]	hit with GO BP
GN007525	Chromosome_2A	201	1	3	49.25373134328358	0.26587301587301587	0	3	0	0	3	0	NA	NA	NA	1.132686084142395	64	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007526	Chromosome_2A	1032	1	37	40.50387596899225	0.8746564046179219	0.42662116040955633	37	0	0.42662116040955633	37	0	NA	NA	NA	6.856111862877762	26	0	unmethylated (<10%)	Q9JI35	Histamine H3 receptor (H3R) (HH3R)	adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway [GO:0007197]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]	hit with GO BP
GN007527	Chromosome_2A	990	1	39	42.42424242424242	0.8760068065796937	0.6394884092725819	39	0	0.6394884092725819	39	0	NA	NA	NA	0.7395234182415776	47	0	unmethylated (<10%)	Q9JI35	Histamine H3 receptor (H3R) (HH3R)	adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway [GO:0007197]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]	hit with GO BP
GN007528	Chromosome_2A	1547	2	56	39.75436328377505	0.9168959823885525	0.4685059864653826	56	0	0.4699248120300752	41	0	0.46674445740956827	15	0	0.6335445148382794	40	0	unmethylated (<10%)	Q9JI35	Histamine H3 receptor (H3R) (HH3R)	adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway [GO:0007197]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]	hit with GO BP
GN007529	Chromosome_2A	30626	26	301	35.21191144778946	0.31823462992244933	82.53958909754517	292	0.8972602739726028	85.44721407624634	45	0.9777777777777777	81.98330878743249	247	0.8825910931174089	80.95238095238095	8	1	methylated (>=50%)	O60879	Protein diaphanous homolog 2 (Diaphanous-related formin-2) (DRF2)	actin filament polymerization [GO:0030041]; female gamete generation [GO:0007292]	hit with GO BP
GN007530	Chromosome_2A	38072	22	553	34.282412271485605	0.496518128529607	81.59754224270354	552	0.9384057971014492	93.04911955514365	52	1	80.72189544799565	500	0.932	71.94174757281553	16	0.875	methylated (>=50%)	O60879	Protein diaphanous homolog 2 (Diaphanous-related formin-2) (DRF2)	actin filament polymerization [GO:0030041]; female gamete generation [GO:0007292]	hit with GO BP
GN007531	Chromosome_2A	18261	13	270	36.356168884507966	0.44871699195699133	83.10694471015879	262	0.9122137404580153	88.87876025524157	43	0.9767441860465116	82.16801364276711	219	0.8995433789954338	51.459257529768855	57	0.543859649122807	methylated (>=50%)	Q5ZMS6	Tudor domain-containing protein 3	siRNA-mediated heterochromatin formation [GO:0141194]	hit with GO BP
GN007532	Chromosome_2A	18495	17	180	36.43687483103542	0.2950257964792578	71.60728855044873	177	0.8813559322033898	68.69618696186961	34	0.8235294117647058	72.11057947900053	143	0.8951048951048951	50.57793345008756	42	0.6190476190476191	methylated (>=50%)	Q4L235	Beta-alanine-activating enzyme (EC 6.2.1.-) (Acyl-CoA synthetase family member 4) (Protein NRPS998)	fatty acid metabolic process [GO:0006631]	hit with GO BP
GN007533	Chromosome_2A	2854	3	31	35.70427470217239	0.34083782138702046	89.9	31	1	85.71428571428571	7	1	90.66193853427896	24	1	50.689655172413794	9	0.4444444444444444	methylated (>=50%)	Q9UM13	Anaphase-promoting complex subunit 10 (APC10) (Cyclosome subunit 10)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; regulation of meiotic cell cycle [GO:0051445]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN007534	Chromosome_2A	3853	5	43	34.25901894627563	0.3809378190212543	79.73684210526316	43	1	80.79470198675497	9	1	79.55160417471976	34	1	89.7239263803681	16	1	methylated (>=50%)	Q4QQZ4	Methionine adenosyltransferase 2 subunit beta (Methionine adenosyltransferase II beta) (MAT II beta)	S-adenosylmethionine biosynthetic process [GO:0006556]	hit with GO BP
GN007535	Chromosome_2A	10819	3	259	36.61151677604215	0.7144935983934022	1.5438703760317947	253	0	0.4580152671755725	36	0	1.7357676050004496	217	0	0.8939974457215837	66	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007536	Chromosome_2A	26073	4	453	35.55018601618533	0.5510472729641113	1.338560849075284	453	0	0.7905138339920948	45	0	1.3995862858148849	408	0	2.2242817423540315	18	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007537	Chromosome_2A	21714	4	528	36.7274569402229	0.7218347320294506	73.17383479178304	455	0.7076923076923077	43.95695364238411	51	0.21568627450980393	75.54176450855418	404	0.7698019801980198	7.556859867938371	41	0	methylated (>=50%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN007538	Chromosome_2A	1490	2	13	36.04026845637584	0.2802291600358786	84.31372549019608	13	1	84.31372549019608	13	1	NA	NA	NA	78.24561403508773	11	1	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN016783	Chromosome_2A	504	1	20	35.91269841269841	1.2679245283018867	89.23076923076923	20	1	89.23076923076923	20	1	NA	NA	NA	90.70221066319895	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007539	Chromosome_2A	315	1	2	43.17460317460318	0.13731473408892764	89.83050847457628	2	1	89.83050847457628	2	1	NA	NA	NA	74.10306588388781	33	0.7272727272727273	NA	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN007540	Chromosome_2A	1652	2	28	41.041162227602904	0.40659253724783545	0.8385744234800838	27	0	0.7936507936507936	24	0	1.3888888888888888	3	0	0.9471191791633781	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007541	Chromosome_2A	375	1	6	45.333333333333336	0.32142857142857145	1.3888888888888888	6	0	1.3888888888888888	6	0	NA	NA	NA	1.1587485515643106	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007542	Chromosome_2A	255	1	9	49.01960784313726	0.5875576036866359	1.6216216216216217	9	0	1.6216216216216217	9	0	NA	NA	NA	1.2387387387387387	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007543	Chromosome_2A	615	1	19	46.17886178861789	0.5829965574015866	0.42643923240938164	19	0	0.42643923240938164	19	0	NA	NA	NA	0.41525103812759534	39	0	unmethylated (<10%)	O02373	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; mesoderm migration involved in gastrulation [GO:0007509]; segment polarity determination [GO:0007367]; UDP-glucuronate biosynthetic process [GO:0006065]	hit with GO BP
GN007544	Chromosome_2A	1072	3	35	41.32462686567164	0.7680340620650127	0.5191434133679429	35	0	0.3616636528028933	27	0	0.9195402298850575	8	0	0.4696060527002348	75	0	unmethylated (<10%)	P55906	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (MP70) (MP78)	extracellular matrix organization [GO:0030198]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN007545	Chromosome_2A	2799	6	79	36.548767416934616	0.8459363714268225	0.42052144659377627	79	0	1.1111111111111112	26	0	0.15521924718665114	53	0	0.5307855626326964	71	0	unmethylated (<10%)	P55906	Transforming growth factor-beta-induced protein ig-h3 (Beta ig-h3) (MP70) (MP78)	extracellular matrix organization [GO:0030198]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN007546	Chromosome_2A	4752	4	96	35.26936026936027	0.649712879409352	0.7473841554559043	96	0	0.9230769230769231	26	0	0.7011866235167206	70	0	0.46210720887245843	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007547	Chromosome_2A	2832	7	95	38.771186440677965	0.8986692320025653	0.5475040257648953	91	0	0.5855562784645413	48	0	0.5102040816326531	43	0	0.6430868167202572	54	0	unmethylated (<10%)	Q5G267	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)	exocytosis [GO:0006887]; zymogen activation [GO:0031638]	hit with GO BP
GN007548	Chromosome_2A	2500	4	79	39.24	0.8274053406396367	0.7541899441340782	79	0	0.6739679865206403	58	0	0.912106135986733	21	0	0.7004310344827587	43	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007549	Chromosome_2A	2809	3	84	36.4186543253827	0.90188284039048106	1.1927998265018434	84	0	0.8818342151675485	20	0	1.2942191544434858	64	0	2.8513238289205702	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007550	Chromosome_2A	2708	6	72	36.81683899556869	0.7881639582828038	0.6832467887400929	72	0	0.7773851590106007	31	0	0.6238859180035651	41	0	1.167728237791932	31	0	unmethylated (<10%)	A0A1S4F2V5	Cathepsin L-like peptidase (AaCatL) (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]	proteolysis [GO:0006508]	hit with GO BP
GN007551	Chromosome_2A	804	3	32	41.791044776119406	0.9209951673527832	0.3472222222222222	32	0	0.2785515320334262	22	0	0.4608294930875576	10	0	0.4484304932735426	45	0	unmethylated (<10%)	A0A1S4F2V5	Cathepsin L-like peptidase (AaCatL) (EC 3.4.22.15) [Cleaved into: Cathepsin L heavy chain; Cathepsin L light chain]	proteolysis [GO:0006508]	hit with GO BP
GN007552	Chromosome_2A	8669	6	204	34.652209020648286	0.7839145727640844	0.6131744919411353	204	0	0.5571030640668524	40	0	0.6236357966947302	164	0	1.2943162633652223	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007553	Chromosome_2A	870	3	27	37.93103448275862	0.8673978065802592	0.0700770847932726	27	0	0.10869565217391304	18	0	0	9	0	0.32164683177870695	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007554	Chromosome_2A	24480	14	342	36.736111111111114	0.41429498208896287	79.17809664486178	296	0.9155405405405406	81.49726110772976	34	0.8235294117647058	78.95800843296945	262	0.9274809160305344	39.30717568045246	81	0.7160493827160493	methylated (>=50%)	Q6NRD3	E3 ubiquitin-protein ligase SH3RF1 (EC 2.3.2.27) (Plenty of SH3s) (Protein POSH) (xPOSH) (RING-type E3 ubiquitin transferase SH3RF1) (SH3 domain-containing RING finger protein 1)	negative regulation of apoptotic process [GO:0043066]; neuron migration [GO:0001764]; positive regulation of JNK cascade [GO:0046330]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein autoubiquitination [GO:0051865]; regulation of CD4-positive, alpha-beta T cell differentiation [GO:0043370]; regulation of CD8-positive, alpha-beta T cell proliferation [GO:2000564]	hit with GO BP
GN007555	Chromosome_2A	20137	14	205	34.49868401450067	0.3425267398514852	90.67353277750532	199	0.9949748743718593	91.71622769753611	51	1	90.4251012145749	148	0.9932432432432432	93.53083434099153	68	1	methylated (>=50%)	B0V207	FHF complex subunit HOOK-interacting protein 1B (FHIP1B) (FTS- and Hook-interacting protein homolog) (FHIP)	early endosome to late endosome transport [GO:0045022]; endosome organization [GO:0007032]; endosome to lysosome transport [GO:0008333]; lysosome organization [GO:0007040]; protein localization to perinuclear region of cytoplasm [GO:1905719]	hit with GO BP
GN007556	Chromosome_2A	9785	14	108	34.36893203883495	0.3765003473644833	78.10676779463243	108	0.8703703703703703	70.04524886877829	20	0.75	79.65571205007825	88	0.8977272727272727	1.6775661074779642	64	0	methylated (>=50%)	Q921G7	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (ETF-QO) (ETF-ubiquinone oxidoreductase) (EC 1.5.5.1) (Electron-transferring-flavoprotein dehydrogenase) (ETF dehydrogenase)	electron transport chain [GO:0022900]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; response to oxidative stress [GO:0006979]	hit with GO BP
GN007557	Chromosome_2A	11213	6	112	34.89699455988585	0.32808202573126793	83.96995365190986	112	0.9196428571428571	80.56828597616865	25	1	84.68834688346884	87	0.896551724137931	11.263318112633181	10	0	methylated (>=50%)	Q99J23	GH3 domain-containing protein	NA	hit, no GO BP
GN007558	Chromosome_2A	2007	1	61	40.00996512207274	0.7595198213288665	0.5324298160696999	61	0	0.5324298160696999	61	0	NA	NA	NA	0.5536332179930796	32	0	unmethylated (<10%)	Q9WV82	Toll-like receptor 4 (CD antigen CD284)	cellular response to amyloid-beta [GO:1904646]; cellular response to mechanical stimulus [GO:0071260]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; cellular response to platelet-derived growth factor stimulus [GO:0036120]; cellular response to type II interferon [GO:0071346]; defense response to Gram-negative bacterium [GO:0050829]; detection of lipopolysaccharide [GO:0032497]; intestinal epithelial structure maintenance [GO:0060729]; macrophage activation [GO:0042116]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of interleukin-17 production [GO:0032700]; negative regulation of interleukin-23 production [GO:0032707]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of tumor necrosis factor production [GO:0032720]; negative regulation of type II interferon production [GO:0032689]; phagocytosis [GO:0006909]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cellular response to macrophage colony-stimulating factor stimulus [GO:1903974]; positive regulation of chemokine (C-X-C motif) ligand 2 production [GO:2000343]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of macrophage activation [GO:0043032]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of platelet activation [GO:0010572]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of type II interferon production [GO:0032729]; toll-like receptor 4 signaling pathway [GO:0034142]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]; wound healing involved in inflammatory response [GO:0002246]	hit with GO BP
GN002198	Chromosome_2A	491	1	16	49.287169042769854	0.5378979801437864	0.24154589371980675	16	0	0.24154589371980675	16	0	NA	NA	NA	1.6467065868263473	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007559	Chromosome_2A	4539	7	121	37.95990306234854	0.7418970943819314	0.9416877942774358	116	0	0.8524001794526693	53	0	1.0021257212268448	63	0	1.5089722675367048	70	0	unmethylated (<10%)	A8WHP3	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (Solute carrier family 5 member 9)	NA	hit, no GO BP
GN007560	Chromosome_2A	435	1	23	55.172413793103445	0.6978934151785714	0	5	0	0	5	0	NA	NA	NA	0.3799071338117349	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007561	Chromosome_2A	3180	5	93	33.55345911949686	1.0420351643705297	2.6920551543007223	93	0	2.091254752851711	9	0	2.7488321954725117	84	0	0.7649513212795549	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007562	Chromosome_2A	6055	7	76	34.76465730800991	0.41670364219520545	35.56759196569623	76	0.39473684210526316	21.917098445595855	37	0.24324324324324326	46.1015593762495	39	0.5384615384615384	0.44486812837623135	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007563	Chromosome_2A	5035	5	152	34.87586891757696	0.9929381664662159	3.3681636282792353	152	0	0.5571030640668524	23	0	3.9021164021164023	129	0	1.1210762331838564	41	0	unmethylated (<10%)	Q9BY43	Charged multivesicular body protein 4a (Chromatin-modifying protein 4a) (CHMP4a) (SNF7 homolog associated with Alix-2) (SNF7-1) (hSnf-1) (Vacuolar protein sorting-associated protein 32-1) (Vps32-1) (hVps32-1)	autophagosome maturation [GO:0097352]; autophagy [GO:0006914]; late endosome to lysosome transport [GO:1902774]; late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; macroautophagy [GO:0016236]; membrane fission [GO:0090148]; membrane invagination [GO:0010324]; midbody abscission [GO:0061952]; mitotic metaphase chromosome alignment [GO:0007080]; multivesicular body assembly [GO:0036258]; multivesicular body sorting pathway [GO:0071985]; multivesicular body-lysosome fusion [GO:0061763]; nervous system process [GO:0050877]; nuclear membrane reassembly [GO:0031468]; nucleus organization [GO:0006997]; plasma membrane repair [GO:0001778]; plasma membrane tubulation [GO:0097320]; post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; protein polymerization [GO:0051258]; regulation of mitotic spindle assembly [GO:1901673]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; vesicle budding from membrane [GO:0006900]; vesicle fusion with vacuole [GO:0051469]; viral budding from plasma membrane [GO:0046761]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN007564	Chromosome_2A	588	1	27	57.82312925170068	0.6336206896551724	93.44978165938865	27	1	93.44978165938865	27	1	NA	NA	NA	90.8207343412527	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007565	Chromosome_2A	4185	8	36	33.500597371565114	0.30727373590693274	93.14679643146796	36	1	94.18457648546143	15	1	92.65671641791045	21	1	91.67636786961583	47	1	methylated (>=50%)	Q96JA3	Pleckstrin homology domain-containing family A member 8 (PH domain-containing family A member 8) (Phosphatidylinositol-four-phosphate adapter protein 2) (FAPP-2) (Phosphoinositol 4-phosphate adapter protein 2) (hFAPP2) (Serologically defined breast cancer antigen NY-BR-86)	ER to Golgi ceramide transport [GO:0035621]; globoside biosynthetic process [GO:0001576]; glycolipid transport [GO:0046836]; intermembrane lipid transfer [GO:0120009]; lipid transport [GO:0006869]; phosphatidylinositol biosynthetic process [GO:0006661]	hit with GO BP
GN007566	Chromosome_2A	162	1	10	50.617283950617285	0.9642857142857143	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5217391304347826	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007567	Chromosome_2A	3527	9	73	36.716756450241	0.6178720728763205	0.9830818472793782	73	0	1.0621348911311737	30	0	0.923323966278603	43	0	1.765375854214123	55	0	unmethylated (<10%)	R9UTQ8	L-proline trans-4-hydroxylase (P4H) (EC 1.14.11.57)	antibiotic metabolic process [GO:0016999]	hit with GO BP
GN007568	Chromosome_2A	9107	4	224	36.79587130778522	0.7270695075096053	2.0787306688089977	224	0	1.1441647597254005	10	0	2.1216258796344922	214	0	0.5970149253731343	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007569	Chromosome_2A	999	1	53	42.34234234234234	1.1839669051878354	0.5617977528089888	53	0	0.5617977528089888	53	0	NA	NA	NA	0.37518037518037517	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007570	Chromosome_2A	12639	5	121	34.9869451697128	0.3137785501489573	79.10777927983287	121	0.9504132231404959	85.18041237113403	14	1	78.46759951093601	107	0.9439252336448598	90.8315565031983	7	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007571	Chromosome_2A	7325	12	56	33.14675767918089	0.27878305961349603	67.6099819912529	55	0.7090909090909091	65.34017971758665	12	0.75	68.17889317889318	43	0.6976744186046512	68.9640035118525	34	0.6764705882352942	methylated (>=50%)	F1Q8J0	RNA-binding region-containing protein 3 (RNA-binding protein 40)	digestive tract development [GO:0048565]; liver development [GO:0001889]; mRNA splicing, via spliceosome [GO:0000398]; pancreas development [GO:0031016]	hit with GO BP
GN007572	Chromosome_2A	9173	17	99	35.473672735201134	0.34327909677302293	86.30157766990291	99	0.9696969696969697	93.75696767001115	30	1	83.5139641517299	69	0.9565217391304348	89.70476911430734	17	1	methylated (>=50%)	P30260	Cell division cycle protein 27 homolog (Anaphase-promoting complex subunit 3) (APC3) (CDC27 homolog) (CDC27Hs) (H-NUC)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; cell division [GO:0051301]; metaphase/anaphase transition of mitotic cell cycle [GO:0007091]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of meiotic cell cycle [GO:0051445]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN007573	Chromosome_2A	9186	13	193	34.519921619856305	0.7052835259681001	1.9878997407087295	193	0	2.1908330931104065	69	0	1.8865207373271888	124	0	2.7166882276843465	64	0	unmethylated (<10%)	A8WHP3	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (Solute carrier family 5 member 9)	NA	hit, no GO BP
GN007574	Chromosome_2A	1824	1	65	42.4890350877193	0.7896840198220281	1.0442260442260443	62	0	1.0442260442260443	62	0	NA	NA	NA	0.39826212889210716	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007575	Chromosome_2A	3519	9	99	38.90309747087241	0.7437205132036804	0.5459707359685521	99	0	0.35496957403651114	52	0	0.6904487917146145	47	0	0.9625300790649708	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007576	Chromosome_2A	4624	9	139	38.819204152249135	0.7981660718321648	0.6922810661128418	139	0	0.8093070308548306	54	0	0.6314127861089187	85	0	0.5549774540409296	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007577	Chromosome_2A	8823	15	247	38.47897540519098	0.7564977870346264	11.36060699272019	245	0.02040816326530612	16.12761276127613	106	0.04716981132075472	7.200460829493087	139	0	0.4854368932038835	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007578	Chromosome_2A	6738	11	66	38.00831107153458	0.2769661941655664	95.40262707024557	63	1	94.84011627906976	33	1	95.76669802445907	30	1	89.74358974358974	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007579	Chromosome_2A	19116	10	269	34.61498221385227	0.4701971567642063	55.90865728595278	269	0.5018587360594795	94.63519313304721	20	1	52.38714713152075	249	0.46184738955823296	44.41887226697353	17	0.47058823529411764	methylated (>=50%)	Q6KAU4	Multivesicular body subunit 12B (ESCRT-I complex subunit MVB12B) (Protein FAM125B)	regulation of epidermal growth factor receptor signaling pathway [GO:0042058]; viral budding [GO:0046755]; virus maturation [GO:0019075]	hit with GO BP
GN007580	Chromosome_2A	17920	11	194	35.206473214285715	0.3523942572937871	66.8223533267781	192	0.6510416666666666	35.42526837324525	31	0.2903225806451613	70.28108796506868	161	0.7204968944099379	1.2295081967213115	30	0	methylated (>=50%)	Q9WVR6	Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (Solute carrier family 7 member 8)	amino acid import across plasma membrane [GO:0089718]; amino acid transmembrane transport [GO:0003333]; amino acid transport [GO:0006865]; glycine transport [GO:0015816]; L-alanine import across plasma membrane [GO:1904273]; L-amino acid transport [GO:0015807]; L-leucine import across plasma membrane [GO:1903801]; L-leucine transport [GO:0015820]; neutral amino acid transport [GO:0015804]; proline transmembrane transport [GO:0035524]; thyroid hormone transport [GO:0070327]; tryptophan transport [GO:0015827]; valine transport [GO:0015829]	hit with GO BP
GN007581	Chromosome_2A	1932	3	64	41.04554865424431	0.8428285141711995	0.6707946336429309	64	0	0.641399416909621	60	0	0.8968609865470852	4	0	0.6504065040650406	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007582	Chromosome_2A	5763	7	141	36.04025681068888	0.7538043518594106	0.6136805867385122	141	0	0.338409475465313	36	0	0.6728496090198218	105	0	0.4098360655737705	53	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN007583	Chromosome_2A	575	2	13	42.608695652173914	0.5052041092187077	0.36036036036036034	13	0	0	9	0	1.1428571428571428	4	0	0.9838998211091234	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007584	Chromosome_2A	10726	20	295	37.339175834421034	0.789360373045041	0.554016620498615	295	0	0.4235176880916791	105	0	0.5995308019810583	190	0	1.384809064204784	31	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN007585	Chromosome_2A	2952	3	87	36.61924119241193	0.8797451443839277	0.6984633805627619	87	0	0.48721071863581	14	0	0.7398568019093079	73	0	0.32124827902707664	56	0	unmethylated (<10%)	Q9UL19	Phospholipase A and acyltransferase 4 (EC 2.3.1.-) (EC 3.1.1.32) (EC 3.1.1.4) (HRAS-like suppressor 4) (HRSL4) (RAR-responsive protein TIG3) (Retinoic acid receptor responder protein 3) (Retinoid-inducible gene 1 protein) (Tazarotene-induced gene 3 protein)	N-acylphosphatidylethanolamine metabolic process [GO:0070292]; negative regulation of cell population proliferation [GO:0008285]; phosphatidylethanolamine acyl-chain remodeling [GO:0036152]; phospholipid metabolic process [GO:0006644]	hit with GO BP
GN007586	Chromosome_2A	1843	3	44	34.725990233315244	0.7919140625	0.6194347657762292	44	0	0.51440329218107	24	0	0.6828057107386716	20	0	0.5954349983460139	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007587	Chromosome_2A	1837	4	53	35.22046815459989	0.9327553171105576	0.5330490405117271	53	0	0.5769230769230769	22	0	0.5073280721533259	31	0	0.6496519721577726	50	0	unmethylated (<10%)	P53816	Phospholipase A and acyltransferase 3 (EC 2.3.1.-) (EC 3.1.1.32) (EC 3.1.1.4) (Adipose-specific phospholipase A2) (AdPLA) (Group XVI phospholipase A1/A2) (H-rev 107 protein homolog) (H-REV107) (HREV107-1) (HRAS-like suppressor 1) (HRAS-like suppressor 3) (HRSL3) (HREV107-3) (Renal carcinoma antigen NY-REN-65)	ether lipid metabolic process [GO:0046485]; lens fiber cell differentiation [GO:0070306]; lipid catabolic process [GO:0016042]; membrane disassembly [GO:0030397]; N-acylphosphatidylethanolamine metabolic process [GO:0070292]; organelle disassembly [GO:1903008]; peroxisome organization [GO:0007031]; phosphatidylethanolamine acyl-chain remodeling [GO:0036152]; phospholipid biosynthetic process [GO:0008654]; phospholipid metabolic process [GO:0006644]; regulation of adipose tissue development [GO:1904177]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN007588	Chromosome_2A	411	1	21	45.25547445255474	1.069119286510591	0.2932551319648094	21	0	0.2932551319648094	21	0	NA	NA	NA	0.2361275088547816	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007589	Chromosome_2A	2168	4	53	36.669741697416974	0.7391416220666941	0.6320224719101124	39	0	1.36986301369863	9	0	0.4979253112033195	30	0	0.7976794778825236	42	0	unmethylated (<10%)	Q5R611	Phospholipase A and acyltransferase 3 (EC 2.3.1.-) (EC 3.1.1.32) (EC 3.1.1.4) (Group XVI phospholipase A2) (H-rev 107 protein homolog) (HRAS-like suppressor 3) (HRSL3)	ether lipid metabolic process [GO:0046485]; lens fiber cell differentiation [GO:0070306]; lipid catabolic process [GO:0016042]; membrane disassembly [GO:0030397]; N-acylphosphatidylethanolamine metabolic process [GO:0070292]; organelle disassembly [GO:1903008]; peroxisome organization [GO:0007031]; phospholipid metabolic process [GO:0006644]; regulation of adipose tissue development [GO:1904177]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN007590	Chromosome_2A	291	1	12	47.766323024054984	0.7275	1.342281879194631	7	0	1.342281879194631	7	0	NA	NA	NA	0.49170251997541486	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007591	Chromosome_2A	771	1	13	40.856031128404666	0.40425102847463096	0.8695652173913043	13	0	0.8695652173913043	13	0	NA	NA	NA	0.7320644216691069	34	0	unmethylated (<10%)	Q8NBX0	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN007592	Chromosome_2A	546	1	16	43.40659340659341	0.6344226579520698	1.3157894736842106	16	0	1.3157894736842106	16	0	NA	NA	NA	1.4423076923076923	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007593	Chromosome_2A	8370	7	216	37.479091995221026	0.7351121014239361	1.3847144697294977	212	0	0.846262341325811	32	0	1.4813876930868575	180	0	0.5034446210916799	56	0	unmethylated (<10%)	Q8MRC9	Putative polypeptide N-acetylgalactosaminyltransferase 9 (pp-GaNTase 9) (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 9) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 9)	protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN007594	Chromosome_2A	1748	2	6	40.617848970251714	0.09880916490804945	0.4854368932038835	6	0	0	1	0	0.5571030640668524	5	0	0.5072463768115942	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007595	Chromosome_2A	6914	5	92	35.160543824124964	0.4338645847685489	53.27406764960971	87	0.7126436781609196	46.08262108262108	12	0.3333333333333333	54.56521739130435	75	0.7733333333333333	70.62084257206209	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007596	Chromosome_2A	31131	8	717	35.51122675146959	0.7306119930607836	15.215569175965216	716	0.12849162011173185	41.51162790697674	19	0.42105263157894735	14.6095717884131	697	0.12051649928263988	0.3896563939071909	58	0	sparse (10-50%)	Q2T9X7	Ubiquitin-conjugating enzyme E2 E3 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme E3) (Ubiquitin carrier protein E3) (Ubiquitin-protein ligase E3)	protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]	hit with GO BP
GN007597	Chromosome_2A	8888	3	245	36.01485148514851	0.8503476273709499	1.0981253431641698	244	0	0	12	0	1.1369173298684425	232	0	1.3268998793727382	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007598	Chromosome_2A	9522	6	254	33.501365259399286	0.950891214297172	1.3518939900950342	254	0	1.5250544662309369	19	0	1.3405590416428979	235	0	0.4575853572685674	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007599	Chromosome_2A	3077	8	106	39.714007149821256	0.8782314848472609	0.4242965609647164	106	0	0.49278423090461104	69	0	0.30543677458766033	37	0	0.3080082135523614	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007600	Chromosome_2A	8827	11	94	33.624107850911976	0.37841755098392266	81.66666666666667	94	0.9042553191489362	90.79310344827586	46	0.9782608695652174	74.73821989528795	48	0.8333333333333334	76.3329312424608	45	0.7111111111111111	methylated (>=50%)	Q3MI00	DnaJ homolog subfamily B member 1	cellular response to heat [GO:0034605]; negative regulation of inclusion body assembly [GO:0090084]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of protein folding [GO:1903334]; protein folding [GO:0006457]	hit with GO BP
GN007601	Chromosome_2A	1818	1	51	37.45874587458746	0.8035324297153951	0.5355404089581305	51	0	0.5355404089581305	51	0	NA	NA	NA	0.7468879668049793	51	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN007602	Chromosome_2A	1956	1	48	37.47443762781186	0.7000715819613458	0.6003430531732419	48	0	0.6003430531732419	48	0	NA	NA	NA	0.6267627702914447	52	0	unmethylated (<10%)	Q9V477	Toll-like receptor Tollo (Toll-like receptor 8)	axis elongation [GO:0003401]; convergent extension [GO:0060026]; peripheral nervous system neuron development [GO:0048935]; regulation of glycoprotein biosynthetic process [GO:0010559]; signal transduction [GO:0007165]	hit with GO BP
GN007603	Chromosome_2A	234	1	12	50.427350427350426	0.8150943396226416	0.5649717514124294	12	0	0.5649717514124294	12	0	NA	NA	NA	0.38255547054322875	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007604	Chromosome_2A	432	1	13	47.22222222222222	0.5473684210526316	0.45871559633027525	13	0	0.45871559633027525	13	0	NA	NA	NA	0.5394470667565745	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007605	Chromosome_2A	2269	2	49	38.0343763772587	0.613033601305676	0.4681647940074906	32	0	0.29239766081871343	17	0	0.78125	15	0	0.9126466753585397	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007606	Chromosome_2A	2061	1	55	36.8753032508491	0.7852733960970135	2.9736618521665252	55	0	2.9736618521665252	55	0	NA	NA	NA	1.3002944062806674	70	0	unmethylated (<10%)	Q9Y2C9	Toll-like receptor 6 (CD antigen CD286)	activation of NF-kappaB-inducing kinase activity [GO:0007250]; antibacterial innate immune response [GO:0140367]; cellular response to amyloid-beta [GO:1904646]; cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; defense response to bacterium [GO:0042742]; detection of diacyl bacterial lipopeptide [GO:0042496]; immune response [GO:0006955]; inflammatory response [GO:0006954]; innate immune response [GO:0045087]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide metabolic process [GO:0046209]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of macrophage activation [GO:0043032]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; signal transduction [GO:0007165]; toll-like receptor signaling pathway [GO:0002224]; toll-like receptor TLR6:TLR2 signaling pathway [GO:0038124]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]	hit with GO BP
GN007607	Chromosome_2A	1581	1	51	37.760910815939276	0.9049901230133788	0.534521158129176	51	0	0.534521158129176	51	0	NA	NA	NA	1.757631822386679	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007608	Chromosome_2A	987	3	27	37.79128672745694	0.7681598062953995	0.6680026720106881	27	0	0.5573248407643312	23	0	1.2448132780082988	4	0	0.48869883934025654	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007609	Chromosome_2A	13715	17	179	33.70032810791105	0.46041857649334067	92.3286884068381	179	1	95.12471655328798	42	1	91.67257892869812	137	1	91.49051490514906	22	1	methylated (>=50%)	Q4V863	Histone-lysine N-methyltransferase EZH2 (EC 2.1.1.356) (Enhancer of zeste homolog 2-B)	heterochromatin formation [GO:0031507]; negative regulation of gene expression, epigenetic [GO:0045814]	hit with GO BP
GN007610	Chromosome_2A	4387	3	80	35.92432186004103	0.5658682876099417	71.15384615384616	80	0.775	47.52066115702479	12	0.5	75.17580872011251	68	0.8235294117647058	26.01156069364162	27	0.18518518518518517	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007611	Chromosome_2A	18598	16	180	36.75126357672868	0.3000015055457854	73.37048294495104	180	0.8611111111111112	68.52670976522627	56	0.7857142857142857	74.9691184727681	124	0.8951612903225806	52.3351259552788	53	0.5094339622641509	methylated (>=50%)	Q7ZU45	Outer dynein arm-docking complex subunit 4 (Tetratricopeptide repeat protein 25) (TPR repeat protein 25)	cilium assembly [GO:0060271]; cilium movement [GO:0003341]; determination of heart left/right asymmetry [GO:0061371]; otolith morphogenesis [GO:0032474]; outer dynein arm assembly [GO:0036158]	hit with GO BP
GN007612	Chromosome_2A	2738	7	58	36.08473338203068	0.6507507212168896	75.79584319915811	57	0.8245614035087719	78.33163784333672	33	0.7878787878787878	73.07901907356948	24	0.875	0.971772327626099	68	0	methylated (>=50%)	P13674	Prolyl 4-hydroxylase subunit alpha-1 (4-PH alpha-1) (EC 1.14.11.2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1)	collagen fibril organization [GO:0030199]	hit with GO BP
GN007613	Chromosome_2A	4288	4	64	39.10914179104478	0.6822763095741242	0.7317965605561654	62	0	0.8944543828264758	40	0	0.4734848484848485	22	0	0.4075761208343323	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007614	Chromosome_2A	1575	4	66	41.77777777777778	0.9695290858725761	0.5034856700232379	66	0	0.5566801619433198	53	0	0.33003300330033003	13	0	2.232415902140673	85	0	unmethylated (<10%)	Q91145	Collagen alpha-1(XII) chain	cell-matrix adhesion [GO:0007160]; cell-substrate junction assembly [GO:0007044]; heart development [GO:0007507]; nervous system development [GO:0007399]	hit with GO BP
GN007615	Chromosome_2A	30168	14	295	36.087907716786	0.3014572282177916	52.068157344650665	294	0.5476190476190477	69.47587849910661	78	0.8717948717948718	47.36503338965323	216	0.4305555555555556	43.99008674101611	12	0.4166666666666667	methylated (>=50%)	O14513	Nck-associated protein 5 (NAP-5) (Peripheral clock protein)	microtubule bundle formation [GO:0001578]; microtubule depolymerization [GO:0007019]	hit with GO BP
GN007616	Chromosome_2A	1370	4	13	35.25547445255474	0.3058455831845034	48.66220735785953	13	0.38461538461538464	85.36585365853658	2	1	42.82945736434109	11	0.2727272727272727	3.1287605294825513	27	0	sparse (10-50%)	Q9TZH6	Putative pterin-4-alpha-carbinolamine dehydratase (PHS) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase) (Pterin carbinolamine dehydratase) (PCD)	tetrahydrobiopterin biosynthetic process [GO:0006729]	hit with GO BP
GN007617	Chromosome_2A	14498	18	373	35.115188301834735	0.8345945935935161	0.5807460352914898	369	0	0.6719367588932806	146	0	0.5339641770868536	223	0	0.6514657980456026	65	0	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN007618	Chromosome_2A	855	1	41	45.96491228070175	0.9115612648221344	0.9646302250803859	41	0	0.9646302250803859	41	0	NA	NA	NA	0.7224563515954244	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007619	Chromosome_2A	38106	18	924	34.45126751692647	0.8175663025615454	1.9628982490055393	910	0	0.5875632446548066	122	0	2.1396656248033397	788	0	0.4864489228630994	55	0	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN007620	Chromosome_2A	393	1	28	51.653944020356235	1.0683495145631068	7.445442875481387	28	0	7.445442875481387	28	0	NA	NA	NA	0.659985333659252	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007621	Chromosome_2A	22551	19	558	38.14021551150725	0.6815445556738212	1.0199125789218066	554	0	0.6053726825576996	134	0	1.1327360724951085	420	0	2.8266666666666667	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007622	Chromosome_2A	1082	4	24	38.724584103512015	0.5941246453738446	0.6082725060827251	24	0	0.45248868778280543	12	0	0.7894736842105263	12	0	1.94331983805668	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007623	Chromosome_2A	10586	14	356	37.66295106744757	0.9486436713557447	0.5835990614283135	356	0	0.6691449814126395	95	0	0.5561735261401557	261	0	0.3275759380583681	52	0	unmethylated (<10%)	Q0VAA2	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN011484	Chromosome_2A	475	2	18	51.578947368421055	0.6219991270187691	0.9803921568627451	18	0	0.9803921568627451	18	0	NA	NA	NA	0.9311950336264874	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007624	Chromosome_2A	14131	5	388	36.15455381784729	0.8403473810471888	1.0327265868150524	381	0	0.22140221402214022	25	0	1.0881063926250567	356	0	0.7604562737642585	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007625	Chromosome_2A	16026	15	176	34.39410957194559	0.3720756473189905	85.76992210904733	173	0.9942196531791907	88.07692307692308	19	1	85.5210753401925	154	0.9935064935064936	86.1244019138756	24	0.9583333333333334	methylated (>=50%)	O95831	Apoptosis-inducing factor 1, mitochondrial (EC 1.6.99.-) (Programmed cell death protein 8)	apoptotic process [GO:0006915]; cellular response to aldosterone [GO:1904045]; cellular response to estradiol stimulus [GO:0071392]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to hypoxia [GO:0071456]; cellular response to nitric oxide [GO:0071732]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; mitochondrial respiratory chain complex assembly [GO:0033108]; neuron differentiation [GO:0030182]; positive regulation of apoptotic process [GO:0043065]; positive regulation of necroptotic process [GO:0060545]; positive regulation of neuron apoptotic process [GO:0043525]; protein import into mitochondrial intermembrane space [GO:0045041]; protein import into the intermembrane space via the disulfide relay system [GO:0160203]; response to ischemia [GO:0002931]; response to L-glutamate [GO:1902065]; response to toxic substance [GO:0009636]	hit with GO BP
GN007626	Chromosome_2A	1310	3	11	36.25954198473283	0.2577817531305903	92.18158890290037	11	1	94.56521739130434	5	1	90.9090909090909	6	1	91.30434782608695	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007627	Chromosome_2A	13534	13	167	33.69292153095907	0.43853920513073746	82.8946210053702	160	0.88125	85.8192505510654	20	0.9	82.49649929985998	140	0.8785714285714286	45.522156801983265	57	0.43859649122807015	methylated (>=50%)	A5PK00	Vacuolar protein-sorting-associated protein 36 (ESCRT-II complex subunit VPS36)	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]	hit with GO BP
GN007628	Chromosome_2A	21239	13	285	37.4640990630444	0.3833170396606863	80.83501333159914	269	0.9256505576208178	89.37888198757764	32	1	79.83583932592431	237	0.9156118143459916	53.453453453453456	26	0.5384615384615384	methylated (>=50%)	A5PKL6	Glutathione S-transferase C-terminal domain-containing protein	NA	hit, no GO BP
GN007629	Chromosome_2A	8098	5	77	35.416152136329956	0.3041753091285862	88.82483370288249	77	1	90.93167701863354	17	1	88.36707152496626	60	1	19.364714887102945	43	0.13953488372093023	methylated (>=50%)	Q9R1V3	SMAD family member 5 (SMAD 5) (Mothers against decapentaplegic homolog 5) (MAD homolog 5) (Mothers against DPP homolog 5)	anatomical structure morphogenesis [GO:0009653]; anti-Mullerian hormone receptor signaling pathway [GO:1990262]; BMP signaling pathway [GO:0030509]; bone development [GO:0060348]; cardiac muscle contraction [GO:0060048]; cartilage development [GO:0051216]; cell differentiation [GO:0030154]; embryonic pattern specification [GO:0009880]; erythrocyte differentiation [GO:0030218]; germ cell development [GO:0007281]; intracellular iron ion homeostasis [GO:0006879]; Mullerian duct regression [GO:0001880]; negative regulation of apoptotic process [GO:0043066]; negative regulation of Fas signaling pathway [GO:1902045]; negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; ossification [GO:0001503]; osteoblast differentiation [GO:0001649]; osteoblast fate commitment [GO:0002051]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein phosphorylation [GO:0006468]; regulation of ossification [GO:0030278]; regulation of transcription by RNA polymerase II [GO:0006357]; SMAD protein signal transduction [GO:0060395]; stem cell differentiation [GO:0048863]; transforming growth factor beta receptor signaling pathway [GO:0007179]; ureteric bud development [GO:0001657]	hit with GO BP
GN017188	Chromosome_2A	512	1	5	43.5546875	0.21386800334168754	73.62637362637362	5	0.8	73.62637362637362	5	0.8	NA	NA	NA	60.97308488612836	38	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007630	Chromosome_2A	564	1	10	37.94326241134752	0.49473684210526314	85	2	1	85	2	1	NA	NA	NA	85.86387434554973	9	0.8888888888888888	NA	Q8R179	Kelch repeat and BTB domain-containing protein 4 (BTB and kelch domain-containing protein 4)	NA	hit, no GO BP
GN007631	Chromosome_2A	8037	4	66	38.70847331093692	0.22939778335561972	46.77154261563747	63	0.5238095238095238	43.65642237982664	13	0.23076923076923078	48.09364548494983	50	0.6	36.303630363036305	7	0.2857142857142857	sparse (10-50%)	Q922Q6	Protein ABHD14A (EC 3.-.-.-) (Alpha/beta hydrolase domain-containing protein 14A) (Abhydrolase domain-containing protein 14A) (Down-regulated in Zic-1-mutant protein)	NA	hit, no GO BP
GN007632	Chromosome_2A	23710	10	383	35.35638970898355	0.5174227102059497	75.19171441163508	360	0.8277777777777777	82.996632996633	11	0.9090909090909091	74.98189717595945	349	0.8252148997134671	41.491259364966105	49	0.32653061224489793	methylated (>=50%)	P58389	Serine/threonine-protein phosphatase 2A activator (EC 5.2.1.8) (PP2A, subunit B', PR53 isoform) (Phosphotyrosyl phosphatase activator) (PTPA) (Serine/threonine-protein phosphatase 2A regulatory subunit 4) (Serine/threonine-protein phosphatase 2A regulatory subunit B')	mitotic spindle organization [GO:0007052]; positive regulation of apoptotic process [GO:0043065]	hit with GO BP
GN007633	Chromosome_2A	672	1	17	42.55952380952381	0.5586581250916915	88.66498740554157	17	1	88.66498740554157	17	1	NA	NA	NA	80.77753779697625	16	1	methylated (>=50%)	P82147	Protein lethal(2)essential for life (Protein Efl21)	negative regulation of translational initiation [GO:0045947]; protein refolding [GO:0042026]; response to heat [GO:0009408]; sarcomere organization [GO:0045214]	hit with GO BP
GN007634	Chromosome_2A	4147	3	49	36.09838437424644	0.3630271587470031	90.98786828422877	49	1	83.15217391304348	3	1	91.52165864494631	46	1	92.07221350078493	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007635	Chromosome_2A	32397	21	411	35.54341451368954	0.40338532227826024	85.28449312141045	410	0.948780487804878	87.05170004657661	42	0.9285714285714286	85.14801625840798	368	0.9510869565217391	1.1036339165545088	48	0	methylated (>=50%)	Q24151	Signal transducer and transcription activator (d-STAT) (Protein marelle)	antiviral innate immune response [GO:0140374]; blastoderm segmentation [GO:0007350]; border follicle cell migration [GO:0007298]; cell dedifferentiation [GO:0043697]; cell surface receptor signaling pathway via JAK-STAT [GO:0007259]; cell surface receptor signaling pathway via STAT [GO:0097696]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to X-ray [GO:0071481]; defense response [GO:0006952]; determination of digestive tract left/right asymmetry [GO:0071907]; eye-antennal disc morphogenesis [GO:0007455]; follicle cell of egg chamber stalk formation [GO:0030713]; germ-line stem cell population maintenance [GO:0030718]; hindgut morphogenesis [GO:0007442]; intestinal stem cell homeostasis [GO:0036335]; lamellocyte differentiation [GO:0035171]; larval lymph gland hemopoiesis [GO:0035167]; larval somatic muscle development [GO:0007526]; long-term memory [GO:0007616]; lymph gland development [GO:0048542]; male germ-line sex determination [GO:0019100]; negative regulation of antimicrobial humoral response [GO:0008348]; negative regulation of stem cell differentiation [GO:2000737]; nervous system development [GO:0007399]; oocyte localization involved in germarium-derived egg chamber formation [GO:0030720]; oogenesis [GO:0048477]; open tracheal system development [GO:0007424]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of heterochromatin formation [GO:0031453]; primary sex determination [GO:0007538]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]; segment specification [GO:0007379]; stem cell division [GO:0017145]; stem cell population maintenance [GO:0019827]; tissue regeneration [GO:0042246]; wing disc morphogenesis [GO:0007472]; wound healing [GO:0042060]	hit with GO BP
GN007636	Chromosome_2A	273	1	13	56.776556776556774	0.5911059293804131	0.5208333333333334	13	0	0.5208333333333334	13	0	NA	NA	NA	2.1739130434782608	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007637	Chromosome_2A	201	1	9	58.208955223880594	0.5304985337243402	0	7	0	0	7	0	NA	NA	NA	0.8656036446469249	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007638	Chromosome_2A	7556	9	181	35.64055055584966	0.7568963418008744	0.9113136252500555	172	0	1.0301411674933232	77	0	0.8624745177983377	95	0	0.5143277002204262	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007639	Chromosome_2A	5565	16	157	37.82569631626235	0.7888101016229334	0.5839010148755734	157	0	0.5125113053964425	78	0	0.6449948400412797	79	0	0.5655355954757152	64	0	unmethylated (<10%)	Q8N695	Sodium-coupled monocarboxylate transporter 1 (Apical iodide transporter) (Electrogenic sodium monocarboxylate cotransporter) (Sodium iodide-related cotransporter) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate metabolic process [GO:1901847]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]; transmembrane transport [GO:0055085]	hit with GO BP
GN007640	Chromosome_2A	26154	15	786	37.229486885371266	0.8696226242690058	1.2546955255155496	726	0	0.3971119133574007	72	0	1.320023100404257	654	0	0.8909630886720408	33	0	unmethylated (<10%)	Q8N695	Sodium-coupled monocarboxylate transporter 1 (Apical iodide transporter) (Electrogenic sodium monocarboxylate cotransporter) (Sodium iodide-related cotransporter) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate metabolic process [GO:1901847]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]; transmembrane transport [GO:0055085]	hit with GO BP
GN007641	Chromosome_2A	2859	3	97	37.77544596012592	0.9511206379147732	0.8142397273243703	97	0	0.828363154406892	59	0	0.7954043305346885	38	0	0.39028620988725066	53	0	unmethylated (<10%)	G5EFC3	Potassium voltage-gated channel protein egl-36 (Egg-laying defective protein 36)	action potential [GO:0001508]; monoatomic ion transmembrane transport [GO:0034220]; potassium ion transmembrane transport [GO:0071805]; protein homooligomerization [GO:0051260]	hit with GO BP
GN007642	Chromosome_2A	4134	4	102	37.276245766811805	0.7103092783505155	0.8836826962597616	102	0	0.762673844773441	59	0	0.9859689040576413	43	0	0.6664734859461026	52	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007643	Chromosome_2A	14427	18	156	36.47327926803909	0.32998240572400445	90.30874785591767	155	0.9870967741935484	93.17635752042287	39	1	89.48530426383331	116	0.9827586206896551	95.16460905349794	30	1	methylated (>=50%)	Q6ZNB6	NF-X1-type zinc finger protein NFXL1 (Ovarian zinc finger protein) (hOZFP)	NA	hit, no GO BP
GN007644	Chromosome_2A	10426	11	118	34.95108382888932	0.37127836793819413	88.02866376282141	117	0.9487179487179487	89.38919342208301	43	0.9534883720930233	87.26714880561035	74	0.9459459459459459	20.92522861753631	28	0.35714285714285715	methylated (>=50%)	Q05086	Ubiquitin-protein ligase E3A (EC 2.3.2.26) (E6AP ubiquitin-protein ligase) (HECT-type ubiquitin transferase E3A) (Human papillomavirus E6-associated protein) (Oncogenic protein-associated protein E6-AP) (Renal carcinoma antigen NY-REN-54)	brain development [GO:0007420]; Golgi lumen acidification [GO:0061795]; negative regulation of TORC1 signaling [GO:1904262]; positive regulation of protein ubiquitination [GO:0031398]; progesterone receptor signaling pathway [GO:0050847]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]; proteolysis [GO:0006508]; regulation of circadian rhythm [GO:0042752]; regulation of synaptic plasticity [GO:0048167]; regulation of ubiquitin-dependent protein catabolic process [GO:2000058]; response to progesterone [GO:0032570]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007645	Chromosome_2A	22841	22	410	34.87588109102053	0.5936305603282561	91.13837531184853	394	0.9593908629441624	94.97955474784189	71	0.9859154929577465	90.45818415865482	323	0.9535603715170279	0.5397301349325337	52	0	methylated (>=50%)	O60264	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (SMARCA5) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (EC 3.6.4.-) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; DNA-templated transcription initiation [GO:0006352]; negative regulation of mitotic chromosome condensation [GO:1905213]; negative regulation of transcription by RNA polymerase I [GO:0016479]; nucleosome assembly [GO:0006334]; positive regulation of DNA replication [GO:0045740]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription by RNA polymerase III [GO:0045945]; rDNA heterochromatin formation [GO:0000183]; regulation of DNA replication [GO:0006275]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN007646	Chromosome_2A	28054	6	359	34.319526627218934	0.43512996973605805	69.44563958298858	356	0.8089887640449438	52.66821345707657	20	0.65	69.93833679692024	336	0.8184523809523809	0.903145437558393	57	0	methylated (>=50%)	Q566M8	RING finger protein 150	ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN017703	Chromosome_2A	2063	4	27	44.15899175957344	0.26846443030653555	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7211538461538461	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007647	Chromosome_2A	576	1	26	50.173611111111114	0.7367178276269185	0.3929273084479371	26	0	0.3929273084479371	26	0	NA	NA	NA	0.5797101449275363	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007648	Chromosome_2A	2100	1	59	41.523809523809526	0.7122040386969942	0.7608695652173914	57	0	0.7608695652173914	57	0	NA	NA	NA	0.5867014341590613	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007649	Chromosome_2A	4725	3	71	34.68783068783069	0.4999776446391845	78.23949955317248	71	0.8028169014084507	50.80701754385965	29	0.5862068965517241	91.05211406096362	42	0.9523809523809523	54.83221476510067	52	0.5192307692307693	methylated (>=50%)	Q6NSJ0	Alpha-galactosidase MYORG (EC 3.2.1.22) (Myogenesis regulating glycosidase) (Nuclear envelope transmembrane protein 37)	carbohydrate metabolic process [GO:0005975]; positive regulation of insulin-like growth factor receptor signaling pathway [GO:0043568]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN007650	Chromosome_2A	4773	5	36	32.03435994133669	0.29597246767742535	90.19170753455194	36	0.9722222222222222	77.94117647058823	4	1	91.417361451692	32	0.96875	76.93733778272154	43	0.7906976744186046	methylated (>=50%)	Q8R2H1	NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa B-like protein) (I-kappa-B-like protein) (IkappaBL) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1)	cellular response to lipopolysaccharide [GO:0071222]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of lipopolysaccharide-mediated signaling pathway [GO:0031665]; negative regulation of toll-like receptor signaling pathway [GO:0034122]; negative regulation of tumor necrosis factor production [GO:0032720]	hit with GO BP
GN007651	Chromosome_2A	13390	13	154	34.81702763256161	0.381300826688654	71.20876688067301	144	0.6944444444444444	65.91523895401262	42	0.6904761904761905	72.93133802816901	102	0.696078431372549	0.7220216606498195	41	0	methylated (>=50%)	Q6PIJ6	F-box only protein 38	positive regulation of neuron projection development [GO:0010976]; positive regulation of T cell activation [GO:0050870]; positive regulation of T cell mediated immune response to tumor cell [GO:0002842]; protein K48-linked ubiquitination [GO:0070936]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN007652	Chromosome_2A	1059	1	14	40.226628895184135	0.3271403353927626	0.6153846153846154	14	0	0.6153846153846154	14	0	NA	NA	NA	0.6922257720979765	34	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN007653	Chromosome_2A	717	1	21	41.701534170153415	0.711578449905482	0.9920634920634921	21	0	0.9920634920634921	21	0	NA	NA	NA	7.525510204081633	26	0.038461538461538464	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007654	Chromosome_2A	630	2	7	37.93650793650794	0.31343283582089554	0.4166666666666667	7	0	0	3	0	0.6024096385542169	4	0	2.199378436528807	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007655	Chromosome_2A	5581	12	141	35.513348862211075	0.8082449258794783	0.9387621438707565	141	0	0.7839721254355401	51	0	0.9905316824471959	90	0	1.4683153013910355	63	0	unmethylated (<10%)	O88533	Aromatic-L-amino-acid decarboxylase (AADC) (EC 4.1.1.28) (DOPA decarboxylase) (DDC)	aminergic neurotransmitter loading into synaptic vesicle [GO:0015842]; amino acid metabolic process [GO:0006520]; catecholamine metabolic process [GO:0006584]; dopamine biosynthetic process [GO:0042416]; gene expression [GO:0010467]; kidney development [GO:0001822]; response to toxic substance [GO:0009636]; serotonin biosynthetic process [GO:0042427]	hit with GO BP
GN007656	Chromosome_2A	468	1	12	44.65811965811966	0.5243697478991597	34.15492957746479	12	0.5	34.15492957746479	12	0.5	NA	NA	NA	0.8035714285714286	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007657	Chromosome_2A	11323	11	123	32.07630486620154	0.4229240273967195	89.39150401836969	123	0.967479674796748	90.43913285158422	33	0.9696969696969697	89.11879612212415	90	0.9666666666666667	36.81037081700332	45	0.37777777777777777	methylated (>=50%)	Q9UKM7	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (ER mannosidase 1) (ERMan1) (Man9GlcNAc2-specific-processing alpha-mannosidase) (Mannosidase alpha class 1B member 1)	endoplasmic reticulum mannose trimming [GO:1904380]; endoplasmic reticulum N-glycan trimming [GO:0140277]; ERAD pathway [GO:0036503]; oligosaccharide metabolic process [GO:0009311]; trimming of terminal mannose on C branch [GO:0036510]; viral protein processing [GO:0019082]	hit with GO BP
GN007658	Chromosome_2A	2782	3	46	36.62832494608195	0.49524767801857583	67.37226277372262	46	0.9347826086956522	64.8491879350348	17	0.8235294117647058	68.53035143769968	29	1	17.50440917107584	41	0.21951219512195122	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007659	Chromosome_2A	3198	6	40	37.554721701063166	0.3619079952469869	90.02514668901928	40	0.95	88.61313868613139	26	0.9615384615384616	91.92913385826772	14	0.9285714285714286	5.658400279427174	35	0.02857142857142857	methylated (>=50%)	Q16956	Endoplasmic reticulum chaperone BiP (EC 3.6.4.10) (Immunoglobulin heavy chain-binding protein homolog) (BiP) (Protein 1603)	NA	hit, no GO BP
GN007660	Chromosome_2A	10320	20	273	35.49418604651163	0.8407595412671555	0.7908734602463606	273	0	0.927172125018693	140	0	0.6709643467964741	133	0	0.35307963907414674	74	0	unmethylated (<10%)	P98164	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)	amyloid-beta clearance [GO:0097242]; cellular response to growth factor stimulus [GO:0071363]; cobalamin transport [GO:0015889]; coronary artery morphogenesis [GO:0060982]; endocytosis [GO:0006897]; folate import across plasma membrane [GO:1904447]; lipid metabolic process [GO:0006629]; male gonad development [GO:0008584]; metal ion transport [GO:0030001]; negative regulation of apoptotic process [GO:0043066]; negative regulation of BMP signaling pathway [GO:0030514]; neural tube closure [GO:0001843]; neuron projection arborization [GO:0140058]; outflow tract septum morphogenesis [GO:0003148]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of lysosomal protein catabolic process [GO:1905167]; positive regulation of neurogenesis [GO:0050769]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; protein transport [GO:0015031]; pulmonary artery morphogenesis [GO:0061156]; receptor-mediated endocytosis [GO:0006898]; response to leptin [GO:0044321]; retinoid metabolic process [GO:0001523]; secondary heart field specification [GO:0003139]; sensory perception of sound [GO:0007605]; transcytosis [GO:0045056]; transport across blood-brain barrier [GO:0150104]; vagina development [GO:0060068]; ventricular compact myocardium morphogenesis [GO:0003223]; vitamin D metabolic process [GO:0042359]	hit with GO BP
GN007661	Chromosome_2A	732	1	25	38.25136612021858	0.9360135031456192	0.45045045045045046	7	0	0.45045045045045046	7	0	NA	NA	NA	0.44960659423004873	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007662	Chromosome_2A	1811	2	44	36.05742683600221	0.7616371317696087	0.27434842249657065	44	0	0.2034587995930824	24	0	0.33222591362126247	20	0	0.5759539236861051	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007663	Chromosome_2A	288	1	7	47.22222222222222	0.4375	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4580152671755725	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010800	Chromosome_2A	405	1	19	46.91358024691358	0.8775230927129661	0	19	0	0	19	0	NA	NA	NA	0.4172461752433936	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007664	Chromosome_2A	786	1	20	38.16793893129771	0.7001915282170059	0	20	0	0	20	0	NA	NA	NA	0.7423904974016332	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007665	Chromosome_2A	702	2	18	38.17663817663818	0.7069090909090909	0	18	0	0	18	0	NA	NA	NA	0.30848329048843187	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007666	Chromosome_2A	765	1	24	38.169934640522875	0.8639186900056465	0	5	0	0	5	0	NA	NA	NA	0.5227552275522755	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007667	Chromosome_2A	2422	3	71	40.338563170933114	0.7208333333333333	0.6707317073170732	64	0	0.8547008547008547	17	0	0.5972696245733788	47	0	1.2642225031605563	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007668	Chromosome_2A	2256	3	61	47.96099290780142	0.47019109542471155	NA	0	NA	NA	NA	NA	NA	NA	NA	1.8018018018018018	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007669	Chromosome_2A	2256	3	61	47.96099290780142	0.47019109542471155	NA	0	NA	NA	NA	NA	NA	NA	NA	2.640845070422535	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007670	Chromosome_2A	2432	3	77	41.15953947368421	0.7478892927033827	0.6130790190735694	77	0	0.19723865877712032	18	0	0.699876492383697	59	0	0.6399317406143344	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007671	Chromosome_2A	3297	5	97	40.64300879587504	0.7126567667061833	0.32210834553440704	97	0	0.14245014245014245	36	0	0.44753853804077576	61	0	2.3166023166023164	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007672	Chromosome_2A	2325	1	86	43.01075268817204	0.8049516908212561	1.298205421916762	84	0	1.298205421916762	84	0	NA	NA	NA	1.2693935119887165	42	0	unmethylated (<10%)	M9PH32	Protein meiotic P26	protein ubiquitination [GO:0016567]	hit with GO BP
GN007673	Chromosome_2A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017072	Chromosome_2A	1584	4	7	39.015151515151516	0.11648037650222708	9.090909090909092	2	0	9.25925925925926	1	0	8.333333333333334	1	0	25.526932084309134	10	0.1	NA	NA	NA	NA	no Swiss-Prot hit
GN007674	Chromosome_2A	210	1	8	53.333333333333336	0.5833333333333334	1.36986301369863	8	0	1.36986301369863	8	0	NA	NA	NA	0.5470459518599562	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007675	Chromosome_2A	393	1	27	52.162849872773535	1.0154066985645933	0.4854368932038835	27	0	0.4854368932038835	27	0	NA	NA	NA	0.8097165991902834	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007676	Chromosome_2A	813	1	12	37.269372693726936	0.425283347863993	30.263157894736842	12	0.08333333333333333	30.263157894736842	12	0.08333333333333333	NA	NA	NA	72.48226950354609	13	0.8461538461538461	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007677	Chromosome_2A	2327	3	23	33.90631714654061	0.34396529562982003	93.48612786489747	23	1	90.0990099009901	5	1	94.24354243542436	18	1	71.16077865897621	21	0.6666666666666666	methylated (>=50%)	Q9W445	Malignant T-cell-amplified sequence 1 homolog (Multiple copies in T-cell lymphoma 1 homolog) (MCT-1)	formation of translation preinitiation complex [GO:0001731]; translation reinitiation [GO:0002188]	hit with GO BP
GN007678	Chromosome_2A	1980	1	26	41.01010101010101	0.314925948356549	82.52427184466019	26	0.9230769230769231	82.52427184466019	26	0.9230769230769231	NA	NA	NA	82.3486506199854	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007679	Chromosome_2A	15293	13	145	33.79977767606094	0.3326642997710414	77.84224841341795	142	0.8943661971830986	75.80071174377224	26	0.8076923076923077	78.14025974025974	116	0.9137931034482759	0.8649093904448105	45	0	methylated (>=50%)	Q9DF58	Scaffold protein ILK (ILK-1) (ILK-2) (Inactive integrin-linked kinase) (p59ILK)	actin filament bundle assembly [GO:0051017]; actin filament network formation [GO:0051639]; caveola assembly [GO:0070836]; integrin-mediated signaling pathway [GO:0007229]; mitotic spindle organization [GO:0007052]; outflow tract morphogenesis [GO:0003151]; positive regulation of BMP signaling pathway [GO:0030513]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; protein localization to cell cortex [GO:0072697]; substrate adhesion-dependent cell spreading [GO:0034446]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN007680	Chromosome_2A	6600	6	51	33.696969696969695	0.27425431506492154	86.48728562980484	51	0.9411764705882353	93.86503067484662	5	1	85.70026178010471	46	0.9347826086956522	43.23962516733601	30	0.26666666666666666	methylated (>=50%)	Q9CR16	Peptidyl-prolyl cis-trans isomerase D (PPIase D) (EC 5.2.1.8) (40 kDa peptidyl-prolyl cis-trans isomerase) (Cyclophilin-40) (CYP-40) (Rotamase D)	cellular response to UV-A [GO:0071492]; lipid droplet organization [GO:0034389]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; positive regulation of protein secretion [GO:0050714]; positive regulation of viral genome replication [GO:0045070]; protein folding [GO:0006457]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN007681	Chromosome_2A	509	2	11	44.59724950884087	0.43463747865238317	1.4836795252225519	11	0	1.5625	9	0	1.2345679012345678	2	0	0.7891770011273957	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007682	Chromosome_2A	5845	5	89	33.37895637296835	0.5496160542975717	81.34715025906736	89	0.8539325842696629	67.36401673640168	10	0.7	83.06244653550043	79	0.8734177215189873	0.8355614973262032	53	0	methylated (>=50%)	P25153	Ubiquitin-conjugating enzyme E2-17 kDa (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 6) (RAD6 homolog) (dRad6) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)	centrosome cycle [GO:0007098]; centrosome separation [GO:0051299]; DNA repair [GO:0006281]; endocytic recycling [GO:0032456]; heart development [GO:0007507]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043518]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of heterochromatin formation [GO:0031452]; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:1902166]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of mitophagy [GO:1901526]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007683	Chromosome_2A	49875	27	1000	35.35438596491228	0.6602050626708342	28.635200609722904	849	0.1978798586572438	24.06311637080868	77	0.2727272727272727	29.20261917875283	772	0.19041450777202074	3.914141414141414	30	0	sparse (10-50%)	Q5ZIF3	Ufm1-specific protease 2 (UfSP2) (EC 3.4.22.-)	proteolysis [GO:0006508]; ribosome disassembly [GO:0032790]	hit with GO BP
GN007684	Chromosome_2A	18823	12	235	34.01158157573182	0.43285339248487353	85.73684210526316	235	0.9744680851063829	93.14140558848433	20	1	85.18751177837804	215	0.9720930232558139	88.93740902474526	14	1	methylated (>=50%)	P08630	Tyrosine-protein kinase Btk (EC 2.7.10.2) (Dsrc28C) (Dsrc29a)	actin cytoskeleton organization [GO:0030036]; cellularization [GO:0007349]; courtship behavior [GO:0007619]; determination of adult lifespan [GO:0008340]; DNA endoreduplication [GO:0042023]; dorsal closure [GO:0007391]; female germline ring canal formation [GO:0007301]; head involution [GO:0008258]; imaginal disc-derived male genitalia development [GO:0007485]; JNK cascade [GO:0007254]; oocyte karyosome formation [GO:0030717]; oogenesis [GO:0048477]; open tracheal system development [GO:0007424]; ovarian fusome organization [GO:0030723]; ovarian nurse cell to oocyte transport [GO:0007300]; regulation of actin filament polymerization [GO:0030833]; salivary gland morphogenesis [GO:0007435]; sensitization [GO:0046960]; spiracle morphogenesis, open tracheal system [GO:0035277]	hit with GO BP
GN007685	Chromosome_2A	9676	6	99	33.412567176519225	0.3665892099414023	88.27702702702703	99	0.98989898989899	81.36142625607779	8	1	89.08165189515368	91	0.989010989010989	13.068478829064297	30	0.2	methylated (>=50%)	Q08881	Tyrosine-protein kinase ITK/TSK (EC 2.7.10.2) (Interleukin-2-inducible T-cell kinase) (IL-2-inducible T-cell kinase) (Kinase EMT) (T-cell-specific kinase) (Tyrosine-protein kinase Lyk)	adaptive immune response [GO:0002250]; B cell receptor signaling pathway [GO:0050853]; cellular defense response [GO:0006968]; gamma-delta T cell activation [GO:0046629]; intracellular signal transduction [GO:0035556]; NK T cell differentiation [GO:0001865]; positive regulation of cytokine production [GO:0001819]; signal transduction [GO:0007165]; T cell activation [GO:0042110]; T cell receptor signaling pathway [GO:0050852]	hit with GO BP
GN007686	Chromosome_2A	1335	2	19	34.756554307116104	0.4712931995540691	95.61258278145695	18	1	94.61077844311377	12	1	96.85185185185185	6	1	38.54231006794318	25	0.44	methylated (>=50%)	Q7PR68	Mediator of RNA polymerase II transcription subunit 7 (Mediator complex subunit 7)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007687	Chromosome_2A	18523	11	235	34.75139016358041	0.4218039104876326	86.38671875	178	0.9213483146067416	86.8229587712207	50	0.9	86.24774658768993	128	0.9296875	0.5852231163130943	68	0	methylated (>=50%)	Q6P1H6	Ankyrin repeat and LEM domain-containing protein 2 (LEM domain-containing protein 4)	central nervous system development [GO:0007417]; mitotic nuclear membrane reassembly [GO:0007084]; negative regulation of apoptotic process [GO:0043066]; negative regulation of phosphorylation [GO:0042326]	hit with GO BP
GN007688	Chromosome_2A	14644	19	412	36.055722480196664	0.86618853974122	0.6012024048096193	409	0	0.5108767303889256	138	0	0.639288444166493	271	0	0.3181818181818182	44	0	unmethylated (<10%)	Q9DBX3	Sushi domain-containing protein 2	negative regulation of cell cycle G1/S phase transition [GO:1902807]; negative regulation of cell division [GO:0051782]	hit with GO BP
GN007689	Chromosome_2A	7911	13	189	36.51877133105802	0.7184802717884894	2.3107366270905145	184	0	0.5444028581150051	93	0	3.371475275847977	91	0	0.3902439024390244	66	0	unmethylated (<10%)	H9JIQ1	Protein mesh	cell-matrix adhesion [GO:0007160]	hit with GO BP
GN007690	Chromosome_2A	2221	2	20	40.65736154885187	0.21958357226187886	9.940652818991097	20	0	9.940652818991097	20	0	NA	NA	NA	7.671232876712328	14	0	unmethylated (<10%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN007691	Chromosome_2A	4657	4	77	34.72192398539833	0.5530230592705917	7.865168539325842	76	0	12.158054711246201	6	0	7.428040854224698	70	0	10.969976905311778	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007692	Chromosome_2A	1684	3	35	34.679334916864605	0.6924342105263158	39.22365988909427	35	0.3142857142857143	82.04158790170132	6	0.8333333333333334	28.814338235294116	29	0.20689655172413793	59.086879432624116	51	0.5686274509803921	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007693	Chromosome_2A	309	1	12	40.77669902912621	0.9986533800161594	95.16539440203562	12	1	95.16539440203562	12	1	NA	NA	NA	89.61280714817572	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007694	Chromosome_2A	1122	1	15	37.70053475935829	0.380167156087644	44.73197781885398	12	0.25	44.73197781885398	12	0.25	NA	NA	NA	50.100150225338005	25	0.56	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007695	Chromosome_2A	12820	9	129	33.63494539781591	0.35596279328057756	74.16769420468557	129	0.8682170542635659	61.79337231968811	9	0.6666666666666666	75.00329077267342	120	0.8833333333333333	76.83720930232558	74	0.7432432432432432	methylated (>=50%)	Q4KM84	Histidine protein methyltransferase 1 homolog (EC 2.1.1.85) (Methyltransferase-like protein 18)	peptidyl-lysine monomethylation [GO:0018026]; regulation of ribosome biogenesis [GO:0090069]; regulation of rRNA processing [GO:2000232]; regulation of translation [GO:0006417]; regulation of translational elongation [GO:0006448]	hit with GO BP
GN007696	Chromosome_2A	35671	8	368	34.204255557735976	0.3531831590411833	65.49693829486576	366	0.6721311475409836	46.130653266331656	17	0.7647058823529411	66.28405702381438	349	0.667621776504298	53.891670459717794	68	0.47058823529411764	methylated (>=50%)	Q6P5I8	Protein YIPF5 (YIP1 family member 5)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; regulation of ER to Golgi vesicle-mediated transport [GO:0060628]; vesicle fusion with Golgi apparatus [GO:0048280]	hit with GO BP
GN007697	Chromosome_2A	3702	4	28	32.090761750405186	0.29604834748037884	92.1875	28	1	87.98586572438163	5	1	92.88653733098178	23	1	97.08654670094259	52	1	methylated (>=50%)	Q963B7	Large ribosomal subunit protein uL6 (60S ribosomal protein L9)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN002763	Chromosome_2A	568	1	14	41.19718309859155	0.5893426221003484	0	6	0	0	6	0	NA	NA	NA	1.3692162417374882	57	0	unmethylated (<10%)	Q5SVZ6	Zinc finger MYM-type protein 1	NA	hit, no GO BP
GN007698	Chromosome_2A	4455	6	115	35.44332210998878	0.8220163849730607	1.2675860147652875	115	0	0.7994186046511628	23	0	1.3785972772703774	92	0	0.24865312888520513	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007699	Chromosome_2A	6836	11	92	33.36746635459333	0.4841754854365195	5.712648070309514	92	0	3.4188034188034186	18	0	6.290361157617795	74	0	1.6582220175034545	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007700	Chromosome_2A	1110	1	58	48.55855855855856	0.8867768595041322	1.1784511784511784	35	0	1.1784511784511784	35	0	NA	NA	NA	1.6893732970027249	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007701	Chromosome_2A	501	1	14	44.31137724550898	0.5749180327868852	0	14	0	0	14	0	NA	NA	NA	0.5681818181818182	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007702	Chromosome_2A	336	1	8	46.13095238095238	0.4497991967871486	0	6	0	0	6	0	NA	NA	NA	0.5521048999309869	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007703	Chromosome_2A	560	2	23	56.607142857142854	0.5126980335960513	NA	0	NA	NA	NA	NA	NA	NA	NA	0	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007704	Chromosome_2A	4981	2	138	36.05701666332062	0.8526062753036437	0.531236719082023	131	0	0	17	0	0.6076810889645115	114	0	0.8156606851549756	49	0	unmethylated (<10%)	P26016	Furin-like protease 1, isoforms 1/1-X/2 (Furin-1) (EC 3.4.21.75) (Kex2-like endoprotease 1) (dKLIP-1)	glutamate receptor clustering [GO:0097688]; peptide hormone processing [GO:0016486]; postsynaptic membrane organization [GO:0001941]; presynaptic membrane organization [GO:0097090]; synaptic target recognition [GO:0008039]	hit with GO BP
GN007705	Chromosome_2A	462	1	5	42.857142857142854	0.2437480215257993	0	5	0	0	5	0	NA	NA	NA	2.903225806451613	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012961	Chromosome_2A	1026	1	18	42.98245614035088	0.4	0.3401360544217687	18	0	0.3401360544217687	18	0	NA	NA	NA	3.044280442804428	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007706	Chromosome_2A	2876	4	70	35.32684283727399	0.7897131739157723	1.9329581600195742	70	0	1.6967908520841017	50	0	2.3982558139534884	20	0	5.1453260015710915	38	0.02631578947368421	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007707	Chromosome_2A	2425	4	80	37.7319587628866	0.9357244146899086	0.43224002034070685	80	0	0.36913990402362495	57	0	0.5718954248366013	23	0	0.6802721088435374	67	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007708	Chromosome_2A	1840	4	57	38.04347826086956	0.856338028169014	0.35137034434293746	57	0	0.25305778152678193	49	0	0.8421052631578947	8	0	1.0863350485991996	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007709	Chromosome_2A	1263	1	36	36.18368962787015	0.8827023878858474	0.8373732921992068	36	0	0.8373732921992068	36	0	NA	NA	NA	1.1059371362048893	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007710	Chromosome_2A	47192	35	702	33.41032378369215	0.53372013917122485	54.89026594371288	679	0.5478645066273933	61.071932299012694	79	0.7848101265822784	54.12750899176238	600	0.5166666666666667	20.555306762203315	39	0.41025641025641024	methylated (>=50%)	Q502W6	von Willebrand factor A domain-containing protein 3B (VWA domain-containing protein 3B)	NA	hit, no GO BP
GN007711	Chromosome_2A	7665	5	197	36.62100456621005	0.7669593969992178	8.64411975068969	197	0	7.13436385255648	96	0	9.781440343962737	101	0	5.244601145879242	47	0	unmethylated (<10%)	P35448	Thrombospondin-1 (Glycoprotein G)	cell adhesion [GO:0007155]; negative regulation of angiogenesis [GO:0016525]	hit with GO BP
GN007712	Chromosome_2A	10138	8	84	36.51607812191754	0.2506672208320664	63.514578408195426	82	0.7560975609756098	64.49612403100775	16	0.6875	63.31435800126502	66	0.7727272727272727	69.26952141057934	12	0.8333333333333334	methylated (>=50%)	Q6TFL4	Kelch-like protein 24 (Kainate receptor-interacting protein for GluR6) (KRIP6) (Protein DRE1)	intermediate filament organization [GO:0045109]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein ubiquitination [GO:0016567]	hit with GO BP
GN007713	Chromosome_2A	6906	3	119	36.200405444540976	0.5261239321492226	64.53795728483823	96	0.75	90.73569482288828	6	1	62.333791838606146	90	0.7333333333333333	80.82959641255606	28	0.9642857142857143	methylated (>=50%)	Q9CRB3	5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17) (Transthyretin-related protein)	adenosine catabolic process [GO:0006154]; AMP catabolic process [GO:0006196]; dAMP catabolic process [GO:0046059]; deoxyadenosine catabolic process [GO:0006157]; deoxyguanosine catabolic process [GO:0006161]; deoxyinosine catabolic process [GO:0006149]; dGMP catabolic process [GO:0046055]; GMP catabolic process [GO:0046038]; guanine catabolic process [GO:0006147]; hypoxanthine catabolic process [GO:0009114]; IMP catabolic process [GO:0006204]; inosine catabolic process [GO:0006148]; purine nucleobase metabolic process [GO:0006144]; urate catabolic process [GO:0019628]; xanthine catabolic process [GO:0009115]	hit with GO BP
GN007714	Chromosome_2A	6192	9	102	37.8875968992248	0.45992754282801435	7.5484764542936285	100	0	11.47227533460803	44	0	5.320304017372421	56	0	0.7589447054571739	48	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN007715	Chromosome_2A	336	1	14	42.26190476190476	0.9398601398601398	1.016260162601626	14	0	1.016260162601626	14	0	NA	NA	NA	0.9747292418772563	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007716	Chromosome_2A	1602	1	21	40.449438202247194	0.3210727238022523	1.2784090909090908	21	0	1.2784090909090908	21	0	NA	NA	NA	1.687255197348599	67	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN007717	Chromosome_2A	730	2	16	36.3013698630137	0.6908789778776766	0.5580357142857143	16	0	0.31645569620253167	13	0	1.1363636363636365	3	0	0.8312958435207825	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007718	Chromosome_2A	1151	3	21	34.144222415291054	0.626029526029526	0.273972602739726	11	0	0.28169014084507044	10	0	0	1	0	5.358948432760364	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007719	Chromosome_2A	12663	5	212	33.99668325041459	0.5794627739898413	82.94066608823333	212	0.9433962264150944	68.88888888888889	12	0.8333333333333334	83.51159883317128	200	0.95	12.583271650629163	27	0.07407407407407407	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007720	Chromosome_2A	3716	6	43	33.34230355220667	0.4177245634215204	48.55729596042869	42	0.5238095238095238	45.24053224155578	19	0.42105263157894735	50.79365079365079	23	0.6086956521739131	65.20702362887492	58	0.7068965517241379	sparse (10-50%)	A2BFC9	Cilia- and flagella-associated protein 77	integrin-mediated signaling pathway [GO:0007229]; positive regulation of focal adhesion assembly [GO:0051894]	hit with GO BP
GN007721	Chromosome_2A	1527	2	18	36.804191224623445	0.3482546721571112	NA	0	NA	NA	NA	NA	NA	NA	NA	1.7241379310344827	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007722	Chromosome_2A	2099	3	39	34.778465936160075	0.6204928408462127	3.2418952618453867	10	0	5.511811023622047	1	0	2.18978102189781	9	0	1.3989169675090252	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007723	Chromosome_2A	11363	13	288	35.37798116694535	0.8108376503095637	1.5847276479693373	269	0	1.3645906228131561	59	0	1.6434774488747783	210	0	0.5173099880620772	62	0	unmethylated (<10%)	Q9Z2J0	Solute carrier family 23 member 1 (Na(+)/L-ascorbic acid transporter 1) (Sodium-dependent vitamin C transporter 1) (Yolk sac permease-like molecule 3)	brain development [GO:0007420]; dehydroascorbic acid transport [GO:0070837]; L-ascorbic acid transmembrane transport [GO:0015882]; lung development [GO:0030324]; response to toxic substance [GO:0009636]; sodium ion transport [GO:0006814]	hit with GO BP
GN007724	Chromosome_2A	1427	2	55	42.9572529782761	0.8617149758454107	0.8037508372404555	55	0	0.7778738115816768	47	0	0.8928571428571429	8	0	0.6878104700038211	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007725	Chromosome_2A	363	1	16	57.30027548209367	0.5535646206633625	1.8656716417910448	14	0	1.8656716417910448	14	0	NA	NA	NA	1.4989293361884368	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007726	Chromosome_2A	3377	3	108	40.39087947882736	0.7853572928218435	1.1088933244621868	108	0	1.117754094099298	99	0	1.0574018126888218	9	0	1.1510002740476843	49	0	unmethylated (<10%)	Q60953	Protein PML	antiviral innate immune response [GO:0140374]; apoptotic process [GO:0006915]; branching involved in mammary gland duct morphogenesis [GO:0060444]; cell fate commitment [GO:0045165]; cellular response to interleukin-4 [GO:0071353]; cellular response to leukemia inhibitory factor [GO:1990830]; cellular senescence [GO:0090398]; chromatin remodeling [GO:0006338]; circadian regulation of gene expression [GO:0032922]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; endoplasmic reticulum calcium ion homeostasis [GO:0032469]; entrainment of circadian clock by photoperiod [GO:0043153]; extrinsic apoptotic signaling pathway [GO:0097191]; fibroblast migration [GO:0010761]; innate immune response [GO:0045087]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; maintenance of protein location in nucleus [GO:0051457]; myeloid cell differentiation [GO:0030099]; negative regulation of angiogenesis [GO:0016525]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-1 production [GO:0032692]; negative regulation of mitotic cell cycle [GO:0045930]; negative regulation of telomere maintenance via telomerase [GO:0032211]; negative regulation of translation in response to oxidative stress [GO:0032938]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; oncogene-induced cell senescence [GO:0090402]; PML body organization [GO:0030578]; positive regulation of apoptotic process involved in mammary gland involution [GO:0060058]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of fibroblast proliferation [GO:0048146]; positive regulation of peptidyl-lysine acetylation [GO:2000758]; positive regulation of protein localization to chromosome, telomeric region [GO:1904816]; positive regulation of signal transduction by p53 class mediator [GO:1901798]; positive regulation of telomere maintenance [GO:0032206]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein import into nucleus [GO:0006606]; protein stabilization [GO:0050821]; protein targeting [GO:0006605]; protein-containing complex assembly [GO:0065003]; regulation of calcium ion transport into cytosol [GO:0010522]; regulation of cell adhesion [GO:0030155]; regulation of cell cycle [GO:0051726]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair [GO:2000779]; regulation of MHC class I biosynthetic process [GO:0045343]; response to cytokine [GO:0034097]; response to gamma radiation [GO:0010332]; response to hypoxia [GO:0001666]; response to UV [GO:0009411]; retinoic acid receptor signaling pathway [GO:0048384]; SMAD protein signal transduction [GO:0060395]; suppression of viral release by host [GO:0044790]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN007727	Chromosome_2A	864	1	0	39.93055555555556	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.32819166393173616	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007728	Chromosome_2A	13962	10	184	33.52671537029079	0.46958543540250053	90.0321094513472	184	1	91.54834347532116	28	1	89.85755429283101	156	1	74.42817932296431	39	0.7692307692307693	methylated (>=50%)	Q6GPB8	Lariat debranching enzyme A (EC 3.1.4.-)	mRNA splicing, via spliceosome [GO:0000398]; RNA splicing, via transesterification reactions [GO:0000375]	hit with GO BP
GN007729	Chromosome_2A	1134	4	34	38.888888888888886	0.7959866220735786	0.3213367609254499	34	0	0.5089058524173028	18	0	0.12987012987012986	16	0	0.44052863436123346	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007730	Chromosome_2A	525	1	24	44	0.9596344249809596	0.5033557046979866	24	0	0.5033557046979866	24	0	NA	NA	NA	1.4829142488716958	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007731	Chromosome_2A	2012	3	65	38.767395626242546	0.8600326178451179	0.5502567865003668	65	0	0.7699711260827719	32	0	0.4149377593360996	33	0	0.44781260764726144	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007732	Chromosome_2A	5181	3	156	35.39857170430419	0.9624148606811146	0.5290383258876088	154	0	0.6993006993006993	47	0	0.4904081927015722	107	0	0.6031882809133994	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007733	Chromosome_2A	3015	2	71	37.18076285240464	0.6836865705963514	0.5079365079365079	71	0	0.7272727272727273	28	0	0.3902439024390244	43	0	1.875	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007734	Chromosome_2A	204	1	9	51.470588235294116	0.6676363636363636	0	9	0	0	9	0	NA	NA	NA	0.29542097488921715	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007735	Chromosome_2A	234	1	3	40.17094017094017	0.37987012987012986	0	3	0	0	3	0	NA	NA	NA	0.8842443729903537	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007736	Chromosome_2A	1583	2	24	37.90271636133923	0.43229711892949796	0.5368098159509203	24	0	0.5368098159509203	24	0	NA	NA	NA	0.9463722397476341	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007737	Chromosome_2A	19704	7	708	37.464474218432805	1.0262016854197071	1.406238025902368	602	0	0.45757071547420963	58	0	1.5024900818772684	544	0	0.6239168110918544	48	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN007738	Chromosome_2A	19354	4	300	35.39836726258138	0.4962559861059948	82.0663872210264	297	0.8922558922558923	40	12	0.4166666666666667	83.59751086063167	285	0.9122807017543859	0.911496618641576	47	0	methylated (>=50%)	Q3T0L3	Large ribosomal subunit protein bL17m (39S ribosomal protein L17, mitochondrial) (L17mt) (MRP-L17)	translation [GO:0006412]	hit with GO BP
GN007739	Chromosome_2A	1239	1	46	41.404358353510894	0.88318973532511	0.7990165949600492	46	0	0.7990165949600492	46	0	NA	NA	NA	10.649960845732185	57	0	unmethylated (<10%)	P48181	Acetylcholine receptor subunit beta-type unc-29 (Uncoordinated protein 29)	calcium ion transport [GO:0006816]; locomotion [GO:0040011]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; positive regulation of acetylcholine secretion, neurotransmission [GO:0014057]; positive regulation of locomotion involved in locomotory behavior [GO:0090326]; regulation of egg-laying behavior [GO:0046662]; regulation of membrane potential [GO:0042391]; regulation of muscle contraction [GO:0006937]; regulation of nematode pharyngeal pumping [GO:0043051]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020199	Chromosome_2A	201	1	22	67.66169154228855	0.9581798483206934	0	13	0	0	13	0	NA	NA	NA	0.6386175807663411	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007740	Chromosome_2A	5107	3	50	35.559036616408854	0.3115152683349945	91.40340218712029	50	1	95.65217391304348	3	1	91.15186615186616	47	1	93.9938791124713	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007741	Chromosome_2A	4920	5	48	33.333333333333336	0.35317394444868166	81.16783858147356	48	0.9166666666666666	79.13907284768212	17	0.8823529411764706	81.94503171247358	31	0.9354838709677419	0.5100182149362478	63	0	methylated (>=50%)	Q5XGG3	PIH1 domain-containing protein 2	box C/D snoRNP assembly [GO:0000492]; rRNA processing [GO:0006364]	hit with GO BP
GN007742	Chromosome_2A	11934	8	117	34.715937657114125	0.3253892941203887	84.40425531914893	116	0.9827586206896551	80.67141403865718	16	0.9375	84.84020434834264	100	0.99	4.787812840043525	32	0.03125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007743	Chromosome_2A	645	1	7	41.55038759689923	0.25606851179673323	1.0256410256410255	7	0	1.0256410256410255	7	0	NA	NA	NA	0.44543429844098	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007744	Chromosome_2A	7393	4	76	33.8698769105911	0.3586818855012512	72.62032085561498	75	0.8266666666666667	33.18485523385301	9	0.3333333333333333	76.81022243256034	66	0.8939393939393939	0.7411982705373688	30	0	methylated (>=50%)	A5PN52	Cilia- and flagella-associated protein HOATZ	cilium assembly [GO:0060271]	hit with GO BP
GN007745	Chromosome_2A	2013	1	75	41.33134624937904	0.8797461715963919	0.4121586810922205	70	0	0.4121586810922205	70	0	NA	NA	NA	0.8903467666354264	55	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN007746	Chromosome_2A	916	2	22	32.314410480349345	0.9251250975531378	0.487408610885459	22	0	0.2971768202080238	13	0	0.7168458781362007	9	0	0.5492730210016155	46	0	unmethylated (<10%)	O33752	Uncharacterized protein SYNPCC7002_A0175	NA	hit, no GO BP
GN007747	Chromosome_2A	264	1	10	46.96969696969697	0.6956521739130435	0.47058823529411764	10	0	0.47058823529411764	10	0	NA	NA	NA	0.5420054200542005	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007748	Chromosome_2A	447	1	18	51.230425055928414	0.6138236191638694	0.7530120481927711	18	0	0.7530120481927711	18	0	NA	NA	NA	0.5888125613346418	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007749	Chromosome_2A	9304	9	293	36.70464316423044	0.9350112328720138	1.0018639328984156	293	0	0.6113769271664008	81	0	1.163045863506693	212	0	0.5041246562786434	40	0	unmethylated (<10%)	Q8VHI5	Vitrin (Akhirin)	extracellular matrix organization [GO:0030198]; positive regulation of cell-substrate adhesion [GO:0010811]; spinal cord development [GO:0021510]	hit with GO BP
GN007750	Chromosome_2A	30750	20	802	35.5219512195122	0.8322292736558425	1.0108032944699967	792	0	0.7592800899887514	73	0	1.0372340425531914	719	0	0.5756315957787016	51	0	unmethylated (<10%)	P50429	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	anterior head development [GO:0097065]; autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN007751	Chromosome_2A	6811	4	54	36.01526941711936	0.2448776590432438	82.46445497630332	54	0.9259259259259259	95.28432732316227	15	1	78.32512315270937	39	0.8974358974358975	72.4702380952381	19	0.631578947368421	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007752	Chromosome_2A	784	3	18	31.25	0.9487696651875757	0.5747126436781609	18	0	0.4784688995215311	9	0	0.6535947712418301	9	0	0.5738447598912715	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007753	Chromosome_2A	483	1	7	41.200828157349896	0.3429701765063907	18.099547511312217	7	0	18.099547511312217	7	0	NA	NA	NA	1.499482936918304	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017778	Chromosome_2A	2748	3	22	31.477438136826784	0.3233217815428058	22.79202279202279	6	0	22.68041237113402	5	0	23.333333333333332	1	0	10.909090909090908	16	0	sparse (10-50%)	Q6P3Z3	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]; nitrate metabolic process [GO:0042126]	hit with GO BP
GN007754	Chromosome_2A	1817	6	46	37.5894331315355	0.7183669961323592	0.5847953216374269	46	0	0.6560449859418932	33	0	0.4665629860031104	13	0	0.6366530241018645	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007755	Chromosome_2A	3278	5	78	36.63819402074436	0.7091617111919766	5.254378648874062	78	0	4.688700999231361	43	0	5.574912891986063	35	0	2.291742451800655	67	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN007756	Chromosome_2A	3376	5	62	35.6042654028436	0.5795290938489822	1.1507479861910241	62	0	1.0291595197255574	7	0	1.1695906432748537	55	0	0.7275666936135813	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007757	Chromosome_2A	12079	8	315	36.89874989651461	0.7661682495919351	1.0169719827586208	312	0	0.6487889273356401	41	0	1.0848755583918315	271	0	0.8699855002416627	58	0	unmethylated (<10%)	P38571	Lysosomal acid lipase/cholesteryl ester hydrolase (Acid cholesteryl ester hydrolase) (LAL) (EC 3.1.1.13) (Cholesteryl esterase) (Diacylglycerol lipase) (Lipase A) (Sterol esterase) (Triacylglycerol ester hydrolase) (Triacylglycerol lipase)	low-density lipoprotein particle clearance [GO:0034383]; sterol metabolic process [GO:0016125]	hit with GO BP
GN007758	Chromosome_2A	2365	2	93	41.268498942917546	0.9292141951837769	0.6340057636887608	93	0	0.6309148264984227	81	0	0.6423982869379015	12	0	0.5700035625222658	46	0	unmethylated (<10%)	Q80VI1	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	antiviral innate immune response [GO:0140374]; cGAS/STING signaling pathway [GO:0140896]; defense response to virus [GO:0051607]; host-mediated suppression of symbiont invasion [GO:0046597]; innate immune response [GO:0045087]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN007759	Chromosome_2A	2364	4	67	37.64805414551608	0.818390376984127	14.73113420695888	61	0	18.581418581418582	9	0	11.551155115511552	52	0	45.17978113600834	14	0.2857142857142857	sparse (10-50%)	Q9UUA2	ATP-dependent DNA helicase pfh1 (EC 5.6.2.3) (DNA 5'-3' helicase pfh1) (DNA repair and recombination helicase pfh1) (PIF1 helicase homolog) (RRM3/PIF1 homolog 1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA strand elongation involved in mitotic DNA replication [GO:1902983]; mitochondrial DNA repair [GO:0043504]; mitotic recombination-dependent replication fork processing [GO:1990426]; removal of RNA primer involved in mitotic DNA replication [GO:1903469]; replication fork processing [GO:0031297]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN007760	Chromosome_2A	2136	1	19	37.359550561797754	0.25592775703763493	24.87411883182276	15	0	24.87411883182276	15	0	NA	NA	NA	29.123837493881545	17	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007761	Chromosome_2A	369	1	9	39.02439024390244	0.6486328125	0.6012024048096193	9	0	0.6012024048096193	9	0	NA	NA	NA	0.42498937526561836	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007762	Chromosome_2A	4076	4	39	34.4946025515211	0.3222800700661736	91.84826472962067	39	1	94.9288256227758	18	1	89.29098966026588	21	1	80.27397260273973	16	0.875	methylated (>=50%)	Q60431	Caspase-3 (CASP-3) (EC 3.4.22.56) (Apopain) (Cysteine protease CPP32) (CPP-32) (Protein Yama) (SREBP cleavage activity 1) (SCA-1) [Cleaved into: Caspase-3 subunit p17; Caspase-3 subunit p12]	apoptotic process [GO:0006915]; erythrocyte differentiation [GO:0030218]; keratinocyte differentiation [GO:0030216]; neuron differentiation [GO:0030182]; positive regulation of amyloid-beta formation [GO:1902004]; positive regulation of neuron apoptotic process [GO:0043525]; proteolysis [GO:0006508]; regulation of protein stability [GO:0031647]; synapse pruning [GO:0098883]	hit with GO BP
GN007763	Chromosome_2A	40537	12	560	34.99765646199768	0.4539514278579275	85.60106412459126	518	0.9768339768339769	85.15258215962442	48	1	85.64783646489994	470	0.9744680851063829	82.62642740619903	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007764	Chromosome_2A	18711	12	342	37.01565923788146	0.5337374588634708	90.58977596931855	319	0.9811912225705329	93.85201305767139	35	1	90.2829657677941	284	0.9788732394366197	95.46460176991151	52	1	methylated (>=50%)	Q9WV60	Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)	animal organ morphogenesis [GO:0009887]; autosome genomic imprinting [GO:0141068]; axonogenesis [GO:0007409]; bone remodeling [GO:0046849]; canonical Wnt signaling pathway [GO:0060070]; cell growth involved in cardiac muscle cell development [GO:0061049]; cell migration [GO:0016477]; cellular response to amyloid-beta [GO:1904646]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to hepatocyte growth factor stimulus [GO:0035729]; cellular response to interleukin-3 [GO:0036016]; cellular response to mechanical stimulus [GO:0071260]; cellular response to retinoic acid [GO:0071300]; circadian rhythm [GO:0007623]; conditioned place preference [GO:1990708]; cytoplasmic translational initiation [GO:0002183]; cytoskeleton organization [GO:0007010]; epithelial to mesenchymal transition [GO:0001837]; ER overload response [GO:0006983]; establishment of cell polarity [GO:0030010]; establishment or maintenance of cell polarity [GO:0007163]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; fat cell differentiation [GO:0045444]; G1/S transition of mitotic cell cycle [GO:0000082]; glycogen metabolic process [GO:0005977]; hepatic stellate cell activation [GO:0035733]; hepatocyte apoptotic process [GO:0097284]; hippocampus development [GO:0021766]; insulin receptor signaling pathway [GO:0008286]; intracellular signal transduction [GO:0035556]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; maintenance of cell polarity [GO:0030011]; meiosis I [GO:0007127]; mitochondrion organization [GO:0007005]; myoblast fusion [GO:0007520]; myotube differentiation [GO:0014902]; negative regulation of apoptotic process [GO:0043066]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cardiac muscle hypertrophy [GO:0010614]; negative regulation of cell migration [GO:0030336]; negative regulation of dendrite development [GO:2000171]; negative regulation of dendrite morphogenesis [GO:0050774]; negative regulation of dopaminergic neuron differentiation [GO:1904339]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902042]; negative regulation of gene expression [GO:0010629]; negative regulation of glycogen biosynthetic process [GO:0045719]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of MAP kinase activity [GO:0043407]; negative regulation of mesenchymal stem cell differentiation [GO:2000740]; negative regulation of neuron maturation [GO:0014043]; negative regulation of neuron migration [GO:2001223]; negative regulation of neuron projection development [GO:0010977]; negative regulation of nitric-oxide synthase activity [GO:0051001]; negative regulation of osteoblast differentiation [GO:0045668]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein localization to centrosome [GO:1904780]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of protein-containing complex assembly [GO:0031333]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; negative regulation of smoothened signaling pathway [GO:0045879]; negative regulation of synaptic assembly at neuromuscular junction [GO:0045886]; negative regulation of TOR signaling [GO:0032007]; negative regulation of TORC2 signaling [GO:1903940]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; neuron projection development [GO:0031175]; neuron projection organization [GO:0106027]; peptidyl-serine phosphorylation [GO:0018105]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; phosphorylation [GO:0016310]; positive regulation of apoptotic process [GO:0043065]; positive regulation of autophagy [GO:0010508]; positive regulation of axon extension [GO:0045773]; positive regulation of cardiac muscle cell differentiation [GO:2000727]; positive regulation of cell differentiation [GO:0045597]; positive regulation of cell migration [GO:0030335]; positive regulation of cell-matrix adhesion [GO:0001954]; positive regulation of cilium assembly [GO:0045724]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of excitatory postsynaptic potential [GO:2000463]; positive regulation of gene expression [GO:0010628]; positive regulation of mitochondrial membrane potential [GO:0010918]; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901030]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of osteoblast proliferation [GO:0033690]; positive regulation of osteoclast differentiation [GO:0045672]; positive regulation of osteoclast proliferation [GO:0090290]; positive regulation of peptidyl-threonine phosphorylation [GO:0010800]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein export from nucleus [GO:0046827]; positive regulation of protein localization to centrosome [GO:1904781]; positive regulation of protein localization to cilium [GO:1903566]; positive regulation of protein processing [GO:0010954]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of protein-containing complex assembly [GO:0031334]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of stem cell differentiation [GO:2000738]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; positive regulation of synaptic assembly at neuromuscular junction [GO:0045887]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; positive regulation of type I interferon production [GO:0032481]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autophosphorylation [GO:0046777]; protein export from nucleus [GO:0006611]; protein localization to microtubule [GO:0035372]; protein phosphorylation [GO:0006468]; re-entry into mitotic cell cycle [GO:0000320]; regulation of apoptotic process [GO:0042981]; regulation of axon extension [GO:0030516]; regulation of axonogenesis [GO:0050770]; regulation of cell growth [GO:0001558]; regulation of circadian rhythm [GO:0042752]; regulation of dendrite morphogenesis [GO:0048814]; regulation of long-term synaptic potentiation [GO:1900271]; regulation of microtubule anchoring at centrosome [GO:0150101]; regulation of microtubule cytoskeleton organization [GO:0070507]; regulation of microtubule-based process [GO:0032886]; regulation of mitotic cell cycle [GO:0007346]; regulation of modification of postsynaptic structure [GO:0099159]; regulation of neuron projection development [GO:0010975]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of osteoblast differentiation [GO:0045667]; regulation of protein export from nucleus [GO:0046825]; regulation of protein localization [GO:0032880]; response to endoplasmic reticulum stress [GO:0034976]; response to methamphetamine hydrochloride [GO:1904313]; response to zinc ion [GO:0010043]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; superior temporal gyrus development [GO:0071109]; TORC2 signaling [GO:0038203]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN007765	Chromosome_2A	3849	3	110	39.07508443751624	0.7487797113752123	0.5640612409347301	75	0	0.48859934853420195	49	0	0.6379585326953748	26	0	0.6350757205666829	44	0	unmethylated (<10%)	M0R3Q7	Patched domain-containing protein 3	NA	hit, no GO BP
GN007766	Chromosome_2A	531	1	3	36.72316384180791	0.16757837155480748	19.51219512195122	3	0	19.51219512195122	3	0	NA	NA	NA	22.32451093210587	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007767	Chromosome_2A	4018	3	121	39.42259830761573	0.7751216463550734	1.2529630883846936	91	0	0.2875629043853343	56	0	2.112676056338028	35	0	0.9308510638297872	40	0	unmethylated (<10%)	M0R3Q7	Patched domain-containing protein 3	NA	hit, no GO BP
GN007768	Chromosome_2A	390	1	2	37.94871794871795	0.14285714285714285	25.806451612903224	2	0	25.806451612903224	2	0	NA	NA	NA	30.205278592375368	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007769	Chromosome_2A	561	1	3	37.967914438502675	0.14854368932038836	40.59405940594059	3	0.3333333333333333	40.59405940594059	3	0.3333333333333333	NA	NA	NA	37.267080745341616	22	0.13636363636363635	NA	NA	NA	NA	no Swiss-Prot hit
GN007770	Chromosome_2A	749	2	30	43.79172229639519	0.8369650240250307	1.0714285714285714	30	0	0.922266139657444	26	0	1.7208413001912046	4	0	0.7278481012658228	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007771	Chromosome_2A	726	1	32	42.14876033057851	0.9996557659208262	0.49504950495049505	32	0	0.49504950495049505	32	0	NA	NA	NA	5.32994923857868	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007772	Chromosome_2A	588	1	22	48.29931972789116	0.6426868044515104	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007773	Chromosome_2A	267	1	7	47.940074906367045	0.4603448275862069	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6349206349206349	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007774	Chromosome_2A	1356	1	42	39.97050147492625	0.7785433070866141	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	M0R3Q7	Patched domain-containing protein 3	NA	hit, no GO BP
GN007775	Chromosome_2A	267	1	7	47.940074906367045	0.4603448275862069	NA	0	NA	NA	NA	NA	NA	NA	NA	0.34965034965034963	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007776	Chromosome_2A	588	1	22	48.29931972789116	0.6426868044515104	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN007777	Chromosome_2A	1373	2	41	37.873270211216315	0.8335258232646292	0.7931665649786455	41	0	0.8130081300813008	38	0	0.6134969325153374	3	0	0.43391188251001334	68	0	unmethylated (<10%)	M0R3Q7	Patched domain-containing protein 3	NA	hit, no GO BP
GN007778	Chromosome_2A	7706	7	112	34.40176485855178	0.49123366200934804	85.40921021235982	112	0.8839285714285714	75.15842839036755	12	0.75	86.47438430133018	100	0.9	46.73645320197044	41	0.6341463414634146	methylated (>=50%)	Q6NX28	Leucine-rich repeat-containing protein 59	NA	hit, no GO BP
GN007779	Chromosome_2A	2283	5	34	35.4796320630749	0.47341745902989124	91.02079395085066	34	1	92.17638691322902	12	1	90.44585987261146	22	1	89.31185944363104	10	1	methylated (>=50%)	Q9VF08	Mitochondrial import inner membrane translocase subunit Tim16 (Protein black pearl)	protein import into mitochondrial matrix [GO:0030150]	hit with GO BP
GN007780	Chromosome_2A	1639	3	62	40.51250762660159	0.9263685673914034	0.5443886097152428	62	0	0.5598621877691645	60	0	0	2	0	0.7696254489481785	42	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN007781	Chromosome_2A	2057	6	54	37.82207097715119	0.7356305092154148	1.284046692607004	54	0	0.8060182697474476	41	0	2.538787023977433	13	0	1.3997760358342666	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007782	Chromosome_2A	14410	5	254	34.309507286606525	0.5989923893236145	92.11235844894358	252	0.9722222222222222	90.71207430340557	6	0.8333333333333334	92.13488742777446	246	0.975609756097561	50.55008685581934	22	0.5909090909090909	methylated (>=50%)	Q61687	Chromatin remodeler ATRX (EC 3.6.4.-) (HP1 alpha-interacting protein) (HP1-BP38 protein) (Heterochromatin protein 2) (Transcriptional regulator ATRX) (X-linked nuclear protein)	cellular response to hydroxyurea [GO:0072711]; chromatin organization [GO:0006325]; chromatin remodeling [GO:0006338]; chromosome organization involved in meiotic cell cycle [GO:0070192]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; forebrain development [GO:0030900]; meiotic spindle organization [GO:0000212]; multicellular organism growth [GO:0035264]; negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric [GO:1904908]; nucleosome assembly [GO:0006334]; positive regulation of nuclear cell cycle DNA replication [GO:0010571]; positive regulation of telomere maintenance [GO:0032206]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-embryonic forelimb morphogenesis [GO:0035128]; protein localization to chromosome, telomeric region [GO:0070198]; replication fork processing [GO:0031297]; seminiferous tubule development [GO:0072520]; Sertoli cell development [GO:0060009]; spermatogenesis [GO:0007283]; subtelomeric heterochromatin formation [GO:0031509]	hit with GO BP
GN007783	Chromosome_2A	48130	26	587	36.49283191356742	0.3676696425344706	90.28998962372344	541	0.9926062846580407	96.3591736551442	75	1	89.35493019884663	466	0.9914163090128756	94.91017964071857	22	0.9545454545454546	methylated (>=50%)	P46100	Chromatin remodeler ATRX (EC 3.6.4.-) (Transcriptional regulator ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX)	cellular response to hydroxyurea [GO:0072711]; chromatin organization [GO:0006325]; chromatin remodeling [GO:0006338]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric [GO:1904908]; positive regulation of nuclear cell cycle DNA replication [GO:0010571]; positive regulation of telomere maintenance [GO:0032206]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to chromosome, telomeric region [GO:0070198]; regulation of DNA-templated transcription [GO:0006355]; replication fork processing [GO:0031297]; subtelomeric heterochromatin formation [GO:0031509]	hit with GO BP
GN007784	Chromosome_2A	2723	4	74	35.80609621740727	0.8488440669969333	2.2370848708487086	74	0	0.5452562704471101	19	0	2.6908452763966073	55	0	86.83926645091694	14	0.9285714285714286	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007785	Chromosome_2A	8612	12	259	36.56525777984208	0.9009867395262939	5.4626956389606445	259	0	4.989782016348774	113	0	5.843621399176954	146	0	0.611695620259359	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007786	Chromosome_2A	770	3	13	35.97402597402598	0.5254593175853018	83.52331606217616	13	0.9230769230769231	90.48275862068965	10	1	62.5	3	0.6666666666666666	85.02673796791444	15	0.8666666666666667	methylated (>=50%)	Q08CG8	RING finger protein 44	protein ubiquitination [GO:0016567]	hit with GO BP
GN007787	Chromosome_2A	3940	5	41	34.06091370558376	0.35879280015636383	84.33388157894737	40	0.975	80.85106382978724	14	0.9285714285714286	85.62570462232243	26	1	3.40826686004351	49	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007788	Chromosome_2A	819	1	33	42.979242979242976	0.8839285714285714	0.5402485143165856	33	0	0.5402485143165856	33	0	NA	NA	NA	1.3341239252890602	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007789	Chromosome_2A	675	1	26	41.333333333333336	0.9027777777777778	0.6013745704467354	26	0	0.6013745704467354	26	0	NA	NA	NA	0.9766454352441614	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007790	Chromosome_2A	5081	8	45	34.02873450108246	0.30645355850422196	77.6325344952796	44	0.8863636363636364	80.99260823653643	18	0.9444444444444444	75.8716104039845	26	0.8461538461538461	4.42714667963999	64	0	methylated (>=50%)	P50430	Arylsulfatase B (ASB) (EC 3.1.6.12) (N-acetylgalactosamine-4-sulfatase) (G4S)	anterior head development [GO:0097065]; autophagy [GO:0006914]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; colon epithelial cell migration [GO:0061580]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; positive regulation of neuron projection development [GO:0010976]; regulation of epithelial cell migration [GO:0010632]; response to estrogen [GO:0043627]; response to methylmercury [GO:0051597]; response to nutrient [GO:0007584]; response to pH [GO:0009268]	hit with GO BP
GN007791	Chromosome_2A	981	1	28	42.813455657492355	0.628558352402746	40.51546391752577	28	0.2857142857142857	40.51546391752577	28	0.2857142857142857	NA	NA	NA	12.043301759133964	58	0	sparse (10-50%)	P15364	Protein amalgam	heterophilic cell-cell adhesion [GO:0007157]; maintenance of blood-brain barrier [GO:0035633]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of glial cell migration [GO:1903977]; positive regulation of glial cell proliferation [GO:0060252]	hit with GO BP
GN007792	Chromosome_2A	1347	1	47	42.46473645137342	0.7744504385482036	0.7638446849140674	47	0	0.7638446849140674	47	0	NA	NA	NA	0.645682001614205	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007793	Chromosome_2A	12048	9	151	34.44555112881806	0.4248379810826918	81.78495864589344	150	0.9066666666666666	90.29293509477311	25	0.96	80.07392861268337	125	0.896	39.14473684210526	36	0.5277777777777778	methylated (>=50%)	E9PTT0	Palmitoyltransferase ZDHHC17 (EC 2.3.1.225) (Acyltransferase ZDHHC17) (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 17)	axonogenesis [GO:0007409]; lipoprotein transport [GO:0042953]; peptidyl-L-cysteine S-palmitoylation [GO:0018230]; protein palmitoylation [GO:0018345]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of modification of synapse structure, modulating synaptic transmission [GO:0098987]; regulation of neurotrophin TRK receptor signaling pathway [GO:0051386]; regulation of programmed cell death [GO:0043067]	hit with GO BP
GN007794	Chromosome_2A	674	3	16	36.201780415430264	0.7294372294372294	0.4087193460490463	16	0	0.2053388090349076	11	0	0.8097165991902834	5	0	0.3418803418803419	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007795	Chromosome_2A	306	1	5	40.52287581699346	0.3996865203761755	0.7575757575757576	5	0	0.7575757575757576	5	0	NA	NA	NA	0.339097999321804	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007796	Chromosome_2A	4387	7	124	35.60519717346706	0.8971355347721902	0.6652938381118327	119	0	0.7550731477111845	48	0	0.619933237958989	71	0	0.47653958944281527	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007797	Chromosome_2A	576	1	27	48.78472222222222	0.789521778860798	0.8278145695364238	27	0	0.8278145695364238	27	0	NA	NA	NA	0.509987250318742	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007798	Chromosome_2A	4707	2	75	40.811557255151904	0.383481066284299	68.14960629921259	75	0.8266666666666667	69.30434782608695	47	0.851063829787234	67.19424460431655	28	0.7857142857142857	53.015075376884425	6	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007799	Chromosome_2A	18159	14	274	34.886282284266755	0.4965436509520578	83.0745616624358	267	0.9176029962546817	76.16487455197132	9	0.8888888888888888	83.30993223856908	258	0.9186046511627907	73.26680672268908	23	0.9130434782608695	methylated (>=50%)	Q7ZW00	Acylglycerol kinase, mitochondrial (EC 2.7.1.107) (EC 2.7.1.138) (EC 2.7.1.94) (Multiple substrate lipid kinase) (MuLK) (Multi-substrate lipid kinase)	ceramide biosynthetic process [GO:0046513]; glycerolipid metabolic process [GO:0046486]; protein insertion into mitochondrial inner membrane [GO:0045039]; sphingosine biosynthetic process [GO:0046512]	hit with GO BP
GN007800	Chromosome_2A	429	1	16	47.31934731934732	0.6749262536873156	0.9345794392523364	16	0	0.9345794392523364	16	0	NA	NA	NA	1.3437364542696142	60	0	unmethylated (<10%)	Q9H8L6	Multimerin-2 (EMILIN-3) (Elastin microfibril interface located protein 3) (Elastin microfibril interfacer 3) (EndoGlyx-1 p125/p140 subunit)	angiogenesis [GO:0001525]; cell adhesion [GO:0007155]; cell migration involved in sprouting angiogenesis [GO:0002042]; negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis [GO:1903588]; negative regulation of cell migration [GO:0030336]; negative regulation of cell migration involved in sprouting angiogenesis [GO:0090051]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of vascular endothelial growth factor receptor signaling pathway [GO:0030948]; positive regulation of defense response to bacterium [GO:1900426]; positive regulation of epithelial tube formation [GO:1905278]; positive regulation of morphogenesis of an epithelium [GO:1905332]	hit with GO BP
GN007801	Chromosome_2A	288	1	14	50.69444444444444	0.7571830985915493	0.9111617312072893	14	0	0.9111617312072893	14	0	NA	NA	NA	6.807202459376373	41	0.0975609756097561	unmethylated (<10%)	Q9UBQ7	Glyoxylate reductase/hydroxypyruvate reductase (EC 1.1.1.79) (EC 1.1.1.81)	dicarboxylic acid metabolic process [GO:0043648]; glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN007802	Chromosome_2A	11608	11	139	35.68228807718815	0.3770212018229605	84.1315453384419	138	0.9130434782608695	74.9791492910759	23	0.8260869565217391	85.47029401000366	115	0.9304347826086956	1.0020732550103664	55	0	methylated (>=50%)	P70582	Nuclear pore complex protein Nup54 (54 kDa nucleoporin) (Nucleoporin Nup54)	NLS-bearing protein import into nucleus [GO:0006607]; nuclear pore organization [GO:0006999]; nucleocytoplasmic transport [GO:0006913]; protein localization to nuclear inner membrane [GO:0036228]; protein targeting [GO:0006605]; regulation of protein import into nucleus [GO:0042306]	hit with GO BP
GN007803	Chromosome_2A	11983	4	336	35.583743636818824	0.8865150363200764	2.1744954456152885	335	0	0.9052924791086351	33	0	2.2614503816793894	302	0	0.63480209111277075	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007804	Chromosome_2A	7464	6	188	35.82529474812433	0.7852269674993285	0.667669738574384	186	0	0.4126547455295736	56	0	0.800114302043149	130	0	0.7744107744107744	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007805	Chromosome_2A	730	2	22	43.83561643835616	0.6282271944922547	0.5012531328320802	22	0	0.3021148036253776	18	0	1.4705882352941178	4	0	2.977867203219316	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007806	Chromosome_2A	59537	23	917	32.55454591262576	0.5819837083151914	72.61588517534648	835	0.881437125748503	89.00255754475704	34	1	71.92850705917694	801	0.8764044943820225	44.18799832144356	46	0.3695652173913043	methylated (>=50%)	Q8R3S6	Exocyst complex component 1 (Exocyst complex component Sec3)	embryo implantation [GO:0007566]; exocytosis [GO:0006887]; Golgi to plasma membrane transport [GO:0006893]; membrane fission [GO:0090148]; mitotic cytokinesis [GO:0000281]; vesicle docking involved in exocytosis [GO:0006904]; vesicle tethering involved in exocytosis [GO:0090522]	hit with GO BP
GN007807	Chromosome_2A	4598	7	114	36.97259678120922	0.72557892303497	1.815038893690579	114	0	1.4512785072563925	44	0	1.9805092738132664	70	0	61.20815138282387	40	0.625	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007808	Chromosome_2A	8576	11	128	34.444962686567166	0.5054629309011073	80.50700312536173	128	0.78125	71.53632393807067	52	0.6538461538461539	84.19934640522875	76	0.868421052631579	9.280742459396752	56	0	methylated (>=50%)	Q17RB8	LON peptidase N-terminal domain and RING finger protein 1 (RING finger protein 191)	NA	hit, no GO BP
GN007809	Chromosome_2A	9212	5	93	34.161962657403386	0.346364514047574	80.33429984649497	93	0.8709677419354839	63.73626373626374	10	0.7	81.43298781596654	83	0.891566265060241	2.8919330289193304	80	0	methylated (>=50%)	Q9GZQ3	COMM domain-containing protein 5 (Hypertension-related calcium-regulated gene protein) (HCaRG)	endocytic recycling [GO:0032456]	hit with GO BP
GN007810	Chromosome_2A	1948	2	25	33.36755646817249	0.4611043781245266	65.77335375191424	24	0.75	70.32418952618454	11	0.8181818181818182	63.75690607734806	13	0.6923076923076923	47.348984436824054	64	0.421875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007811	Chromosome_2A	5598	2	9	47.30260807431225	0.03338900155075748	10	1	0	10	1	0	NA	NA	NA	23.076923076923077	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007812	Chromosome_2A	1152	3	1	46.09375	0.01920512136569752	NA	0	NA	NA	NA	NA	NA	NA	NA	74.16666666666667	7	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN007813	Chromosome_2A	1738	2	5	42.40506329113924	0.06902742032853557	70.2127659574468	5	0.8	23.076923076923077	1	0	73.71428571428571	4	1	69.73044631020768	43	0.813953488372093	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007814	Chromosome_2A	420	1	19	47.38095238095238	0.8260869565217391	47.78503994190269	19	0.47368421052631576	47.78503994190269	19	0.47368421052631576	NA	NA	NA	85.16687268232386	18	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007815	Chromosome_2A	11127	6	145	35.454300350498784	0.41670390123584333	83.07708733717702	144	0.9652777777777778	93.07228915662651	40	0.975	80.37700027122321	104	0.9615384615384616	75.06426735218508	18	0.8333333333333334	methylated (>=50%)	A2ANX9	Zinc finger protein 711	germ cell development [GO:0007281]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN007816	Chromosome_2A	9131	5	88	35.29733873617347	0.3103503147811981	90.00314861460957	88	0.9772727272727273	89.59016393442623	22	0.9090909090909091	90.10132501948559	66	1	44.29289303661163	36	0.3055555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007817	Chromosome_2A	3267	1	43	40.18977655341292	0.3318427915414706	93.42270632593213	43	1	93.42270632593213	43	1	NA	NA	NA	89.44543828264759	7	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007818	Chromosome_2A	10789	6	162	37.649457781073316	0.4237178714832664	81.06478729727435	158	0.9367088607594937	93.62029208301307	27	1	79.50553646429935	131	0.9236641221374046	23.958333333333332	30	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007819	Chromosome_2A	21978	8	378	35.72208572208572	0.5410235580828595	78.17632374195243	358	0.8966480446927374	27.891156462585034	6	0.3333333333333333	78.83224632858601	352	0.90625	1.5145140933950358	44	0	methylated (>=50%)	P49247	Ribose-5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase)	D-ribose metabolic process [GO:0006014]; pentose-phosphate shunt [GO:0006098]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]	hit with GO BP
GN007820	Chromosome_2A	13276	7	217	35.40976197649895	0.5221173276594819	84.45569620253164	217	0.9400921658986175	89.64451313755796	26	0.9615384615384616	83.91987870082197	191	0.93717277486911	81.09919571045576	24	0.9583333333333334	methylated (>=50%)	Q5I7G2	Retinoic acid receptor RXR (Retinoid X receptor) (LymRXR)	NA	hit, no GO BP
GN007821	Chromosome_2A	2599	6	80	42.247018083878416	0.6987568768336823	12.280030604437643	80	0	12.782956058588548	71	0	9.141274238227147	9	0	4.895583704210886	68	0	sparse (10-50%)	Q7TM99	Monocarboxylate transporter 9 (MCT 9) (Solute carrier family 16 member 9)	carboxylic acid transmembrane transport [GO:1905039]; carnitine transmembrane transport [GO:1902603]; creatine transmembrane transport [GO:0015881]; urate metabolic process [GO:0046415]	hit with GO BP
GN007822	Chromosome_2A	4252	4	58	33.84289746001881	0.4767018854211367	52.825382121352476	58	0.5517241379310345	46.9678953626635	14	0.5	54.2421627840092	44	0.5681818181818182	80.87056128293241	31	0.967741935483871	methylated (>=50%)	Q400C7	Archaemetzincin-2 (EC 3.4.-.-) (Archeobacterial metalloproteinase-like protein 2)	proteolysis [GO:0006508]	hit with GO BP
GN007823	Chromosome_2A	10108	4	183	35.338345864661655	0.5809248309842656	72.19209914794733	146	0.8561643835616438	86.59384309831182	44	1	67.13189113747383	102	0.7941176470588235	50	10	0.6	methylated (>=50%)	Q91ZD4	Vang-like protein 2 (Loop-tail protein 1) (Loop-tail-associated protein) (Van Gogh-like protein 2)	anterior/posterior pattern specification [GO:0009952]; apical protein localization [GO:0045176]; branching involved in blood vessel morphogenesis [GO:0001569]; cardiac vascular smooth muscle cell differentiation [GO:0060947]; cell migration involved in kidney development [GO:0035787]; cochlea development [GO:0090102]; cochlea morphogenesis [GO:0090103]; convergent extension involved in axis elongation [GO:0060028]; convergent extension involved in neural plate elongation [GO:0022007]; convergent extension involved in organogenesis [GO:0060029]; digestive tract morphogenesis [GO:0048546]; dopaminergic neuron axon guidance [GO:0036514]; epicardial cell to mesenchymal cell transition [GO:0003347]; establishment of body hair planar orientation [GO:0048105]; establishment of epithelial cell polarity [GO:0090162]; establishment of planar polarity [GO:0001736]; establishment of planar polarity involved in neural tube closure [GO:0090177]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; glomerulus development [GO:0032835]; hair follicle development [GO:0001942]; heart looping [GO:0001947]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; inner ear receptor cell development [GO:0060119]; inner ear receptor cell stereocilium organization [GO:0060122]; kidney morphogenesis [GO:0060993]; lateral sprouting involved in lung morphogenesis [GO:0060490]; membranous septum morphogenesis [GO:0003149]; muscular septum morphogenesis [GO:0003150]; neural tube closure [GO:0001843]; non-canonical Wnt signaling pathway [GO:0035567]; non-motile cilium assembly [GO:1905515]; orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis [GO:0060488]; outflow tract septum morphogenesis [GO:0003148]; planar dichotomous subdivision of terminal units involved in lung branching morphogenesis [GO:0060489]; positive regulation of JUN kinase activity [GO:0043507]; post-anal tail morphogenesis [GO:0036342]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of establishment of planar polarity [GO:0090175]; regulation of synapse pruning [GO:1905806]; regulation of Wnt signaling pathway [GO:0030111]; Rho protein signal transduction [GO:0007266]; serotonergic neuron axon guidance [GO:0036515]; somatic stem cell division [GO:0048103]; somatic stem cell population maintenance [GO:0035019]; Wnt signaling pathway, planar cell polarity pathway [GO:0060071]; wound healing [GO:0042060]	hit with GO BP
GN007824	Chromosome_2A	11402	10	110	35.116646202420625	0.31303575194645883	79.85622753555243	107	0.9439252336448598	55.35307517084282	11	0.7272727272727273	81.66107382550335	96	0.96875	45.354048401553634	46	0.391304347826087	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007825	Chromosome_2A	3324	4	106	37.39470517448857	0.9175481633099483	0.6367978166931999	106	0	0.38588754134509373	44	0	0.8130081300813008	62	0	1.9655172413793103	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007826	Chromosome_2A	525	1	20	40.76190476190476	0.9287925696594427	0.2336448598130841	20	0	0.2336448598130841	20	0	NA	NA	NA	0.444642063139173	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007827	Chromosome_2A	204	1	10	53.431372549019606	0.6882591093117408	0	3	0	0	3	0	NA	NA	NA	0.3836317135549872	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017714	Chromosome_2A	324	1	13	42.592592592592595	0.9226725082146768	13.551401869158878	13	0	13.551401869158878	13	0	NA	NA	NA	5.7926829268292686	13	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007828	Chromosome_2A	2384	4	71	39.47147651006711	0.7647239540977682	2.10896309314587	71	0	0.11641443538998836	15	0	2.97079556898288	56	0	0.44404973357015987	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007829	Chromosome_2A	525	1	21	41.333333333333336	0.9453781512605042	0.47393364928909953	21	0	0.47393364928909953	21	0	NA	NA	NA	0.7365684575389948	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007830	Chromosome_2A	606	1	8	36.7986798679868	0.38996138996138996	0.27624309392265195	8	0	0.27624309392265195	8	0	NA	NA	NA	0.4975124378109453	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007831	Chromosome_2A	3027	5	114	37.69408655434424	1.0603429203539823	2.2754491017964074	114	0	0.9283819628647215	20	0	2.4749558043606363	94	0	0.4591368227731864	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007832	Chromosome_2A	342	1	7	45.32163742690059	0.4428412874583796	0	7	0	0	7	0	NA	NA	NA	0.42668735453840184	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007833	Chromosome_2A	468	1	7	45.2991452991453	0.325	0	7	0	0	7	0	NA	NA	NA	0.28785261945883706	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007834	Chromosome_2A	228	1	7	47.80701754385965	0.6879310344827586	11.781206171107995	7	0	11.781206171107995	7	0	NA	NA	NA	14.100135317997294	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007835	Chromosome_2A	168	1	3	48.214285714285715	0.3181818181818182	2.9411764705882355	3	0	2.9411764705882355	3	0	NA	NA	NA	13.307984790874524	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007836	Chromosome_2A	9583	6	258	35.27079202754879	0.8678562590496248	3.0093209054593877	258	0	1.3622291021671826	41	0	3.207758299142111	217	0	0.46935394809497516	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007837	Chromosome_2A	3626	4	135	38.63761720904578	1.001616467506957	0.5048187241854062	134	0	0.4854368932038835	124	0	0.6501950585175552	10	0	0.6535947712418301	9	0	unmethylated (<10%)	A0A140LIJ0	DC-STAMP domain-containing protein 2	fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]; sperm-egg recognition [GO:0035036]	hit with GO BP
GN007838	Chromosome_2A	7100	7	170	33.84507042253521	0.8418764847925162	0.7999200079992	168	0	0.697350069735007	26	0	0.8170888292284347	142	0	13.090128755364807	35	0.08571428571428572	unmethylated (<10%)	Q7ZYF1	DnaJ homolog subfamily C member 27-A (Rab and DnaJ domain-containing protein 1) (Rab and DnaJ domain-containing protein A)	phagosome-lysosome fusion [GO:0090385]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN007839	Chromosome_2A	922	2	10	35.9002169197397	0.35382608028244683	69.9288256227758	10	1	73.67021276595744	7	1	62.365591397849464	3	1	82.6470588235294	7	1	methylated (>=50%)	Q9WZV3	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN007840	Chromosome_2A	5609	3	154	37.92119807452309	0.764225728937003	0.45176720701567896	154	0	0.4398182084738308	145	0	0.5673758865248227	9	0	0.4448038819247877	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007841	Chromosome_2A	8042	13	202	36.309375777169855	0.7853063836925378	1.0667682636441567	202	0	0.9803921568627451	116	0	1.1365593249526433	86	0	0.7892659826361483	44	0	unmethylated (<10%)	Q9Z1L4	Retinoschisin (X-linked juvenile retinoschisis protein homolog)	protein homooligomerization [GO:0051260]; retina layer formation [GO:0010842]; visual perception [GO:0007601]	hit with GO BP
GN007842	Chromosome_2A	26142	12	461	33.734985846530485	0.620666841840004	84.47297886928878	455	0.978021978021978	92.33128834355828	16	1	84.22592259225922	439	0.9772209567198178	91.11688311688312	26	1	methylated (>=50%)	P51538	Cytochrome P450 3A9 (EC 1.14.14.1) (3AH15) (CYPIIIA9) (Cytochrome P450 olfactive 3) (Cytochrome P450-OLF3)	alkaloid catabolic process [GO:0009822]; estrogen metabolic process [GO:0008210]; female pregnancy [GO:0007565]; lipid hydroxylation [GO:0002933]; oxidative demethylation [GO:0070989]; positive regulation of gene expression [GO:0010628]; response to dexamethasone [GO:0071548]; response to estradiol [GO:0032355]; response to estrogen [GO:0043627]; response to ethanol [GO:0045471]; response to zinc ion [GO:0010043]; retinoic acid metabolic process [GO:0042573]; steroid metabolic process [GO:0008202]; xenobiotic catabolic process [GO:0042178]; xenobiotic transport [GO:0042908]	hit with GO BP
GN007843	Chromosome_2A	672	1	32	41.964285714285715	1.0843081887858008	0.19286403085824494	32	0	0.19286403085824494	32	0	NA	NA	NA	0.8653122648607976	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007844	Chromosome_2A	2149	2	64	36.71475104699861	0.8838052153349869	1.117533718689788	63	0	0.9728622631848438	47	0	1.557632398753894	16	0	0.4506760140210315	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007845	Chromosome_2A	7124	7	126	35.82257158899495	0.5521543038096152	67.66290405336069	124	0.782258064516129	73.47799879445449	43	0.8604651162790697	66.09092390418772	81	0.7407407407407407	59.46205571565802	51	0.5294117647058824	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007846	Chromosome_2A	13261	7	387	38.17208355327652	0.8023824723133866	1.0895376449224752	372	0	0.970873786407767	35	0	1.1028269648959304	337	0	1.3657056145675266	41	0	unmethylated (<10%)	Q27433	Mechanosensory protein 2	detection of mechanical stimulus involved in sensory perception of touch [GO:0050976]; mechanosensory behavior [GO:0007638]; positive regulation of detection of mechanical stimulus involved in sensory perception of touch [GO:1905789]; positive regulation of mechanosensory behavior [GO:1905792]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN007847	Chromosome_2A	666	1	33	45.645645645645644	0.9512638504155124	1.2510425354462051	33	0	1.2510425354462051	33	0	NA	NA	NA	2.328372539606337	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007848	Chromosome_2A	549	1	8	42.4408014571949	0.35091083413231067	54.37392795883362	8	0.75	54.37392795883362	8	0.75	NA	NA	NA	5.130168453292496	63	0.015873015873015872	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007849	Chromosome_2A	12794	8	160	34.37548851023917	0.4258122464703725	74.58677685950413	160	0.925	85.32675709001234	16	1	73.60469049498252	144	0.9166666666666666	1.2030798845043311	62	0	methylated (>=50%)	Q27433	Mechanosensory protein 2	detection of mechanical stimulus involved in sensory perception of touch [GO:0050976]; mechanosensory behavior [GO:0007638]; positive regulation of detection of mechanical stimulus involved in sensory perception of touch [GO:1905789]; positive regulation of mechanosensory behavior [GO:1905792]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN007850	Chromosome_2A	16523	8	349	36.80324396296072	0.6256685774252152	75.80988179435185	348	0.8591954022988506	78.26086956521739	14	0.7857142857142857	75.73518169308394	334	0.8622754491017964	38.23072943610968	40	0.3	methylated (>=50%)	Q27433	Mechanosensory protein 2	detection of mechanical stimulus involved in sensory perception of touch [GO:0050976]; mechanosensory behavior [GO:0007638]; positive regulation of detection of mechanical stimulus involved in sensory perception of touch [GO:1905789]; positive regulation of mechanosensory behavior [GO:1905792]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN007851	Chromosome_2A	2147	3	14	35.39823008849557	0.20822855401071	64.26512968299711	14	0.9285714285714286	83.48214285714286	4	1	55.1063829787234	10	0.9	69.21529175050301	19	0.6842105263157895	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007852	Chromosome_2A	11424	8	156	34.80392156862745	0.4514591439688716	80.30740489130434	156	0.967948717948718	80.22670025188917	13	0.9230769230769231	80.3132398470224	143	0.972027972027972	82.95682730923694	49	0.7959183673469388	methylated (>=50%)	Q16TM5	Band 7 protein AAEL010189	NA	hit, no GO BP
GN007853	Chromosome_2A	3072	3	43	37.532552083333336	0.3977836665863647	61.973684210526315	43	0.6046511627906976	0.34843205574912894	10	0	70.84796788760663	33	0.7878787878787878	55.060449050086355	44	0.6590909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007854	Chromosome_2A	10285	7	199	34.43850267379679	0.6582040137705034	35.77760891590679	183	0.3224043715846995	39.326837909654564	26	0.4230769230769231	35.1854588443919	157	0.3057324840764331	0.5342399222923749	47	0	sparse (10-50%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN007855	Chromosome_2A	9370	7	127	34.26894343649947	0.46487470935320147	86.73322240709928	127	0.952755905511811	87.511071744907	19	0.9473684210526315	86.62186152675628	108	0.9537037037037037	77.16666666666667	23	0.8260869565217391	methylated (>=50%)	Q9EPW9	Toll-like receptor 6 (CD antigen CD286)	antibacterial innate immune response [GO:0140367]; cellular response to amyloid-beta [GO:1904646]; cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to oxidised low-density lipoprotein particle stimulus [GO:0140052]; detection of diacyl bacterial lipopeptide [GO:0042496]; inflammatory response [GO:0006954]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide metabolic process [GO:0046209]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of macrophage activation [GO:0043032]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of reactive oxygen species biosynthetic process [GO:1903428]; response to bacterial lipoprotein [GO:0032493]; toll-like receptor signaling pathway [GO:0002224]; toll-like receptor TLR6:TLR2 signaling pathway [GO:0038124]; TRIF-dependent toll-like receptor signaling pathway [GO:0035666]	hit with GO BP
GN007856	Chromosome_2A	51984	13	691	33.8277162203755	0.46487432300249776	83.13751447956314	672	0.9017857142857143	63.53421859039837	51	0.7254901960784313	84.60014226196525	621	0.9162640901771336	61.865924010344145	67	0.6119402985074627	methylated (>=50%)	P22682	E3 ubiquitin-protein ligase CBL (EC 2.3.2.27) (Casitas B-lineage lymphoma proto-oncogene) (Proto-oncogene c-Cbl) (RING-type E3 ubiquitin transferase CBL) (Signal transduction protein CBL)	bone resorption [GO:0045453]; cell surface receptor signaling pathway [GO:0007166]; cellular response to hypoxia [GO:0071456]; cellular response to nerve growth factor stimulus [GO:1990090]; cellular response to platelet-derived growth factor stimulus [GO:0036120]; DNA damage response [GO:0006974]; male gonad development [GO:0008584]; mast cell degranulation [GO:0043303]; negative regulation of apoptotic process [GO:0043066]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of receptor-mediated endocytosis [GO:0048260]; protein autoubiquitination [GO:0051865]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; protein phosphorylation [GO:0006468]; protein polyubiquitination [GO:0000209]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; regulation of platelet-derived growth factor receptor-alpha signaling pathway [GO:2000583]; regulation of Rap protein signal transduction [GO:0032487]; response to activity [GO:0014823]; response to ethanol [GO:0045471]; response to gamma radiation [GO:0010332]; response to starvation [GO:0042594]; response to testosterone [GO:0033574]; signal transduction [GO:0007165]; ubiquitin-dependent endocytosis [GO:0070086]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007857	Chromosome_2A	2123	4	18	38.29486575600565	0.23174044875682231	91.79775280898876	18	0.9444444444444444	95.48611111111111	12	1	85.03184713375796	6	0.8333333333333334	92.58122281913533	50	1	methylated (>=50%)	Q08DJ7	Protein AAR2 homolog (AAR2 splicing factor homolog)	spliceosomal tri-snRNP complex assembly [GO:0000244]	hit with GO BP
GN007858	Chromosome_2A	393	1	19	43.25699745547074	1.0427314620863009	5.333333333333333	19	0	5.333333333333333	19	0	NA	NA	NA	1.1196417146513116	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020807	Chromosome_2A	575	1	21	42.43478260869565	0.8468335787923417	4.901960784313726	21	0	4.901960784313726	21	0	NA	NA	NA	0.6060606060606061	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007859	Chromosome_2A	330	1	8	48.18181818181818	0.4320785597381342	0.704225352112676	8	0	0.704225352112676	8	0	NA	NA	NA	0.36656891495601174	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007860	Chromosome_2A	258	1	8	50.3875968992248	0.49271902602052997	0	7	0	0	7	0	NA	NA	NA	0.4132231404958678	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007861	Chromosome_2A	843	3	4	34.75682087781732	0.15715883668903805	0.9646302250803859	4	0	0.9646302250803859	4	0	NA	NA	NA	2.9411764705882355	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007862	Chromosome_2A	16935	18	207	33.392382639503985	0.4389301985358914	87.4550744480575	195	0.9846153846153847	87.0928829915561	12	0.9166666666666666	87.48273003592152	183	0.9890710382513661	91.28424048381359	43	0.9534883720930233	methylated (>=50%)	Q1JPD2	Phosphatidylserine lipase ABHD16A (EC 3.1.-.-) (Alpha/beta hydrolase domain-containing protein 16A) (Abhydrolase domain-containing protein 16A) (HLA-B-associated transcript 5 homolog) (Monoacylglycerol lipase ABHD16A) (EC 3.1.1.23)	monoacylglycerol catabolic process [GO:0052651]; phosphatidylserine catabolic process [GO:0006660]	hit with GO BP
GN007863	Chromosome_2A	15927	9	424	37.75350034532555	0.747097921903211	1.9798541160125043	172	0	0.970873786407767	6	0	2.037071022205909	166	0	0.5949851253718657	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007864	Chromosome_2A	264	1	11	46.59090909090909	0.7764705882352941	0.9280742459396751	11	0	0.9280742459396751	11	0	NA	NA	NA	0.4427390791027155	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007865	Chromosome_2A	2154	4	20	34.215413184772515	0.3183329638661051	92.14007782101167	20	1	96.29629629629629	2	1	91.75870858113849	18	1	81.48342977380327	18	1	methylated (>=50%)	Q3UFB2	Box C/D snoRNA protein 1 (Zinc finger HIT domain-containing protein 6)	box C/D snoRNP assembly [GO:0000492]; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; protein complex oligomerization [GO:0051259]; snoRNA localization [GO:0048254]	hit with GO BP
GN007866	Chromosome_2A	2652	3	37	37.14177978883861	0.40461169252084417	54.49936628643853	37	0.6216216216216216	43.89489953632148	16	0.625	61.868958109559614	21	0.6190476190476191	41.10874200426439	39	0.3333333333333333	methylated (>=50%)	Q5JUQ0	Protein FAM78A	NA	hit, no GO BP
GN007867	Chromosome_2A	424	2	0	39.15094339622642	0	NA	0	NA	NA	NA	NA	NA	NA	NA	90.45558086560365	60	0.9833333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN007868	Chromosome_2A	11041	3	159	34.16357214020469	0.49378465315343695	70.41899441340782	159	0.7610062893081762	38.507462686567166	22	0.36363636363636365	74.96808510638297	137	0.8248175182481752	62.33766233766234	23	0.5652173913043478	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007869	Chromosome_2A	14252	10	223	33.8198147628403	0.5484277762745932	87.56298535775683	222	0.9279279279279279	94.28571428571429	22	1	86.8706682359095	200	0.92	1.188707280832095	32	0	methylated (>=50%)	P62915	Transcription initiation factor IIB (EC 2.3.1.48) (General transcription factor TFIIB) (RNA polymerase II alpha initiation factor)	chromosome organization [GO:0051276]; DNA-templated transcription initiation [GO:0006352]; gene expression [GO:0010467]; meiotic sister chromatid cohesion [GO:0051177]; protein acetylation [GO:0006473]; RNA polymerase II core complex assembly [GO:1990114]; RNA polymerase II preinitiation complex assembly [GO:0051123]; spindle assembly [GO:0051225]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]; transcriptional start site selection at RNA polymerase II promoter [GO:0001174]; viral transcription [GO:0019083]	hit with GO BP
GN007870	Chromosome_2A	1165	3	43	38.88412017167382	0.9823319476037337	0.5597014925373134	43	0	0.6151742993848257	41	0	0	2	0	0.47086521483225424	72	0	unmethylated (<10%)	O08600	Endonuclease G, mitochondrial (Endo G) (EC 3.1.30.-)	apoptotic DNA fragmentation [GO:0006309]; cellular response to calcium ion [GO:0071277]; cellular response to glucose stimulus [GO:0071333]; cellular response to hypoxia [GO:0071456]; cellular response to oxidative stress [GO:0034599]; DNA catabolic process [GO:0006308]; DNA damage response [GO:0006974]; in utero embryonic development [GO:0001701]; mitochondrial DNA catabolic process [GO:0032043]; negative regulation of TOR signaling [GO:0032007]; positive regulation of apoptotic DNA fragmentation [GO:1902512]; positive regulation of apoptotic process [GO:0043065]; positive regulation of autophagy [GO:0010508]; positive regulation of hydrogen peroxide-mediated programmed cell death [GO:1901300]; positive regulation of mitochondrial DNA replication [GO:0090297]; response to antibiotic [GO:0046677]; response to estradiol [GO:0032355]; response to mechanical stimulus [GO:0009612]; response to tumor necrosis factor [GO:0034612]	hit with GO BP
GN007871	Chromosome_2A	285	1	1	56.14035087719298	0.05366221050649595	2.6315789473684212	1	0	2.6315789473684212	1	0	NA	NA	NA	0.4632929436920884	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007872	Chromosome_2A	12092	12	318	37.01620906384387	0.7697920478668671	1.2496860085405677	317	0	0.7253544345532477	71	0	1.373050965790086	246	0	0.45466702326825353	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007873	Chromosome_2A	171	1	9	47.36842105263158	0.9418604651162791	0.22573363431151242	9	0	0.22573363431151242	9	0	NA	NA	NA	0.846262341325811	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007874	Chromosome_2A	1062	2	14	41.90207156308851	0.3095952023988006	0.8235294117647058	14	0	0.8235294117647058	14	0	NA	NA	NA	0.20718232044198895	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007875	Chromosome_2A	5329	6	136	36.36704822668418	0.7725024169213273	3.0193780982424516	136	0.007352941176470588	1.4506769825918762	29	0	3.3078427885470387	107	0.009345794392523364	0.8970358814352574	55	0	unmethylated (<10%)	Q5ZJF4	Peroxiredoxin-6 (EC 1.11.1.27) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.4) (Glutathione-dependent peroxiredoxin) (Lysophosphatidylcholine acyltransferase 5) (LPC acyltransferase 5) (LPCAT-5) (Lyso-PC acyltransferase 5) (EC 2.3.1.23) (Non-selenium glutathione peroxidase) (NSGPx)	cell redox homeostasis [GO:0045454]	hit with GO BP
GN007876	Chromosome_2A	39171	36	525	36.10579255061142	0.41279651067210593	92.48832100980725	520	0.9865384615384616	92.73527059450814	134	0.9701492537313433	92.41368196285403	386	0.9922279792746114	2.8917910447761193	35	0	methylated (>=50%)	Q3TLH4	Protein PRRC2C (BAT2 domain-containing protein 1) (HLA-B-associated transcript 2-like 2) (Proline-rich and coiled-coil-containing protein 2C)	hematopoietic progenitor cell differentiation [GO:0002244]; stress granule assembly [GO:0034063]	hit with GO BP
GN007877	Chromosome_2A	345	1	8	45.21739130434783	0.45634920634920634	0	8	0	0	8	0	NA	NA	NA	0.4990642545227698	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007878	Chromosome_2A	11554	8	133	35.416306041197856	0.3671049824567774	67.64925373134328	133	0.5864661654135338	44.96551724137931	21	0.2857142857142857	69.89747095010253	112	0.6428571428571429	25.060827250608273	10	0	methylated (>=50%)	Q5T9C2	Early estrogen-induced gene 1 protein (EEIG1)	positive regulation of osteoclast differentiation [GO:0045672]	hit with GO BP
GN007879	Chromosome_2A	405	1	2	35.55555555555556	0.2910528206970895	61.61616161616162	2	1	61.61616161616162	2	1	NA	NA	NA	36.74911660777385	11	0.2727272727272727	NA	NA	NA	NA	no Swiss-Prot hit
GN007880	Chromosome_2A	12112	15	102	36.575297225891674	0.25271860532478435	77.38521168753726	102	0.8627450980392157	73.54651162790698	29	0.896551724137931	78.37584396099025	73	0.8493150684931506	18.718801996672212	29	0.034482758620689655	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007881	Chromosome_2A	26917	24	319	35.984693688003865	0.36644197679009294	89.05431833953693	301	0.9634551495016611	93.11314125087843	60	0.9833333333333333	88.16608996539793	241	0.9585062240663901	90.2880658436214	15	1	methylated (>=50%)	A3KPW9	Large proline-rich protein BAG6 (BCL2-associated athanogene 6) (HLA-B-associated transcript 3)	brain development [GO:0007420]; endoplasmic reticulum stress-induced pre-emptive quality control [GO:0061857]; ERAD pathway [GO:0036503]; internal peptidyl-lysine acetylation [GO:0018393]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; kidney development [GO:0001822]; lung development [GO:0030324]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of proteolysis [GO:0045861]; proteasomal protein catabolic process [GO:0010498]; protein stabilization [GO:0050821]; regulation of apoptotic process [GO:0042981]; regulation of embryonic development [GO:0045995]; spermatogenesis [GO:0007283]; synaptonemal complex assembly [GO:0007130]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007882	Chromosome_2A	1510	3	52	42.317880794701985	0.7697435495255274	1.9873150105708246	45	0	2.084476138233681	39	0	1.6605166051660516	6	0	1.702127659574468	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007883	Chromosome_2A	2729	3	24	34.99450348112862	0.28739425000877594	89.53568953568954	24	1	89.47368421052632	6	1	89.56262425447316	18	1	80.60606060606061	13	0.8461538461538461	methylated (>=50%)	Q9IB83	Proteasome subunit beta type-1-B (20S proteasome beta-6 subunit B) (B6-B)	protein catabolic process [GO:0030163]	hit with GO BP
GN007884	Chromosome_2A	2753	2	51	40.10170722847803	0.4632172455658784	55.67049808429119	51	0.6470588235294118	40.59500959692898	25	0.52	65.68877551020408	26	0.7692307692307693	44.927536231884055	38	0.34210526315789475	methylated (>=50%)	Q9DAW6	U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD splicing factor Prp4)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007885	Chromosome_2A	10912	13	204	34.07258064516129	0.6443885561839126	1.9220893551463576	203	0	0.741132874536792	77	0	2.3749111945600325	126	0	1.0029717682020802	52	0	unmethylated (<10%)	Q6UW60	Proprotein convertase subtilisin/kexin type 4 (EC 3.4.21.-) (Proprotein convertase 4) (PC4)	acrosome reaction [GO:0007340]; binding of sperm to zona pellucida [GO:0007339]; fertilization [GO:0009566]; peptide hormone processing [GO:0016486]; protein processing [GO:0016485]; reproductive process [GO:0022414]; sperm capacitation [GO:0048240]	hit with GO BP
GN007886	Chromosome_2A	291	1	7	53.608247422680414	0.33933033483258374	1.5228426395939085	7	0	1.5228426395939085	7	0	NA	NA	NA	0.5571030640668524	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007887	Chromosome_2A	378	1	21	44.17989417989418	1.1605263157894736	0.322234156820623	21	0	0.322234156820623	21	0	NA	NA	NA	0.6157290792051497	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007888	Chromosome_2A	636	1	20	43.55345911949686	0.6845334194381659	0.41208791208791207	19	0	0.41208791208791207	19	0	NA	NA	NA	0.42052144659377627	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007889	Chromosome_2A	612	1	13	44.11764705882353	0.43808160343593416	1.834862385321101	7	0	1.834862385321101	7	0	NA	NA	NA	3.6231884057971016	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007890	Chromosome_2A	306	1	6	43.13725490196079	0.421875	42.857142857142854	1	0	42.857142857142854	1	0	NA	NA	NA	50.51546391752577	14	0.5714285714285714	NA	NA	NA	NA	no Swiss-Prot hit
GN007891	Chromosome_2A	1721	4	19	35.15398024404416	0.36291897891231967	49.58813838550247	19	0.7368421052631579	54.92424242424242	4	0.75	48.10526315789474	15	0.7333333333333333	1.3257575757575757	50	0	sparse (10-50%)	Q9Y333	U6 snRNA-associated Sm-like protein LSm2 (Protein G7b) (Small nuclear ribonuclear protein D homolog) (snRNP core Sm-like protein Sm-x5)	deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA catabolic process [GO:0006402]; mRNA splicing, via spliceosome [GO:0000398]; spliceosomal snRNP assembly [GO:0000387]; spliceosomal tri-snRNP complex assembly [GO:0000244]	hit with GO BP
GN007892	Chromosome_2A	3971	5	29	36.8421052631579	0.2163707419724555	57.560733763014376	29	0.5862068965517241	50.450450450450454	10	0.5	63.15323294951284	19	0.631578947368421	44.099378881987576	8	0.5	methylated (>=50%)	Q05B52	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial (4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase) (EC 4.1.1.130) (Coenzyme Q biosynthesis protein 4 homolog)	ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN007893	Chromosome_2A	26066	24	302	33.60699762142254	0.4117363876849587	88.1981322102179	300	0.9866666666666667	84.24507658643326	55	0.9454545454545454	88.99274246756103	245	0.9959183673469387	27.569005653475223	49	0.42857142857142855	methylated (>=50%)	Q8BRH4	Histone-lysine N-methyltransferase 2C (Lysine N-methyltransferase 2C) (EC 2.1.1.364) (Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog)	eyelid development in camera-type eye [GO:0061029]; multicellular organism growth [GO:0035264]; positive regulation of fibroblast proliferation [GO:0048146]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; single fertilization [GO:0007338]	hit with GO BP
GN007894	Chromosome_2A	13310	42	283	35.69496619083396	0.6675072390828959	0.8515201211050839	282	0	0.8982035928143712	170	0	0.7843740387573055	112	0	0.7139857202855943	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007895	Chromosome_2A	25195	14	331	33.87973804326255	0.4581455694686562	80.44483902621373	329	0.8905775075987842	78.18181818181819	32	0.84375	80.647624866351	297	0.8956228956228957	0.7501630789302022	64	0	methylated (>=50%)	Q641Y2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (EC 7.1.1.2) (Complex I-49kD) (CI-49kD) (NADH-ubiquinone oxidoreductase 49 kDa subunit)	cellular response to oxygen levels [GO:0071453]; gliogenesis [GO:0042063]; mitochondrial ATP synthesis coupled electron transport [GO:0042775]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]; neural precursor cell proliferation [GO:0061351]; neurogenesis [GO:0022008]	hit with GO BP
GN002308	Chromosome_2A	214	1	12	46.728971962616825	1.047735618115055	0.18181818181818182	12	0	0.18181818181818182	12	0	NA	NA	NA	1.7191977077363896	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007896	Chromosome_2A	2959	4	65	36.09327475498479	0.6795329282080271	0.6341154090044389	62	0	0.8005822416302766	12	0	0.587758411025537	50	0	1.7026106696935301	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007897	Chromosome_2A	1309	2	46	38.5790679908327	0.945512216569311	0.7189934092270821	42	0	0.6974716652136007	29	0	0.7662835249042146	13	0	0.7015650296815974	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007898	Chromosome_2A	10153	10	255	34.649857185068456	0.8368947215813825	1.1999722549767635	255	0	1.1729323308270676	65	0	1.2080778939776415	190	0	0.625229863920559	62	0	unmethylated (<10%)	J3S6Y1	Thrombospondin-type laminin G domain and EAR repeat-containing protein (TSP-EAR)	hair cycle process [GO:0022405]; Notch signaling pathway [GO:0007219]; regulation of Notch signaling pathway [GO:0008593]; sensory perception of sound [GO:0007605]; signal transduction [GO:0007165]; tooth mineralization [GO:0034505]	hit with GO BP
GN007899	Chromosome_2A	19817	19	579	38.15915627996165	0.8055107427238938	2.5241100130967973	579	0.012089810017271158	1.7224409448818898	239	0.008368200836820083	2.90585271544906	340	0.014705882352941176	0.48661800486618007	38	0	unmethylated (<10%)	A2AX52	Collagen alpha-4(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN007900	Chromosome_2A	40598	42	675	34.54357357505296	0.559936772351553	78.45986479135908	554	0.9133574007220217	83.58774373259052	152	0.9605263157894737	76.90672246220302	402	0.8955223880597015	72.14170692431561	19	0.7894736842105263	methylated (>=50%)	P98158	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)	amyloid-beta clearance [GO:0097242]; animal organ regeneration [GO:0031100]; aorta development [GO:0035904]; cell population proliferation [GO:0008283]; cellular response to growth factor stimulus [GO:0071363]; chemoattraction of axon [GO:0061642]; coronary artery morphogenesis [GO:0060982]; coronary vasculature development [GO:0060976]; cranial skeletal system development [GO:1904888]; endocytic hemoglobin import into cell [GO:0020028]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; folate import across plasma membrane [GO:1904447]; forebrain development [GO:0030900]; gene expression [GO:0010467]; heart development [GO:0007507]; kidney development [GO:0001822]; male gonad development [GO:0008584]; metal ion transport [GO:0030001]; metanephric proximal tubule development [GO:0072237]; negative regulation of apoptotic process [GO:0043066]; negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of thrombin-activated receptor signaling pathway [GO:0070495]; neural tube closure [GO:0001843]; neuron projection arborization [GO:0140058]; outflow tract morphogenesis [GO:0003151]; outflow tract septum morphogenesis [GO:0003148]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of endocytosis [GO:0045807]; positive regulation of lipoprotein transport [GO:0140077]; positive regulation of lysosomal protein catabolic process [GO:1905167]; positive regulation of neurogenesis [GO:0050769]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; protein import [GO:0017038]; protein transport [GO:0015031]; pulmonary artery morphogenesis [GO:0061156]; receptor-mediated endocytosis [GO:0006898]; response to leptin [GO:0044321]; response to retinoic acid [GO:0032526]; response to vitamin D [GO:0033280]; response to X-ray [GO:0010165]; response to xenobiotic stimulus [GO:0009410]; secondary heart field specification [GO:0003139]; sensory perception of sound [GO:0007605]; transcytosis [GO:0045056]; vagina development [GO:0060068]; ventricular compact myocardium morphogenesis [GO:0003223]; ventricular septum development [GO:0003281]; vitamin metabolic process [GO:0006766]	hit with GO BP
GN007901	Chromosome_2A	18600	22	220	34.58064516129032	0.3957171260801956	76.38960150504532	216	0.8611111111111112	81.51790216843168	75	0.9333333333333333	73.75776397515529	141	0.8226950354609929	60.7008760951189	22	0.6818181818181818	methylated (>=50%)	A2ARV4	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)	amyloid-beta clearance [GO:0097242]; aorta development [GO:0035904]; cell population proliferation [GO:0008283]; cellular response to growth factor stimulus [GO:0071363]; chemoattraction of axon [GO:0061642]; coronary artery morphogenesis [GO:0060982]; coronary vasculature development [GO:0060976]; cranial skeletal system development [GO:1904888]; endocytic hemoglobin import into cell [GO:0020028]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; folate import across plasma membrane [GO:1904447]; forebrain development [GO:0030900]; gene expression [GO:0010467]; heart development [GO:0007507]; kidney development [GO:0001822]; male gonad development [GO:0008584]; metal ion transport [GO:0030001]; negative regulation of apoptotic process [GO:0043066]; negative regulation of BMP signaling pathway [GO:0030514]; neural tube closure [GO:0001843]; neuron projection arborization [GO:0140058]; outflow tract morphogenesis [GO:0003151]; outflow tract septum morphogenesis [GO:0003148]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of endocytosis [GO:0045807]; positive regulation of lipoprotein transport [GO:0140077]; positive regulation of neurogenesis [GO:0050769]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; protein import [GO:0017038]; protein transport [GO:0015031]; pulmonary artery morphogenesis [GO:0061156]; receptor-mediated endocytosis [GO:0006898]; response to leptin [GO:0044321]; response to X-ray [GO:0010165]; secondary heart field specification [GO:0003139]; sensory perception of sound [GO:0007605]; smoothened signaling pathway [GO:0007224]; transcytosis [GO:0045056]; vagina development [GO:0060068]; ventricular compact myocardium morphogenesis [GO:0003223]; ventricular septum development [GO:0003281]; vitamin metabolic process [GO:0006766]	hit with GO BP
GN007902	Chromosome_2A	6660	8	116	36.291291291291294	0.5322339966738819	81.12137203166228	116	0.9396551724137931	82.06638115631692	36	1	80.812324929972	80	0.9125	91.1169744942832	18	1	methylated (>=50%)	P98164	Low-density lipoprotein receptor-related protein 2 (LRP-2) (Glycoprotein 330) (gp330) (Megalin)	amyloid-beta clearance [GO:0097242]; cellular response to growth factor stimulus [GO:0071363]; cobalamin transport [GO:0015889]; coronary artery morphogenesis [GO:0060982]; endocytosis [GO:0006897]; folate import across plasma membrane [GO:1904447]; lipid metabolic process [GO:0006629]; male gonad development [GO:0008584]; metal ion transport [GO:0030001]; negative regulation of apoptotic process [GO:0043066]; negative regulation of BMP signaling pathway [GO:0030514]; neural tube closure [GO:0001843]; neuron projection arborization [GO:0140058]; outflow tract septum morphogenesis [GO:0003148]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of lysosomal protein catabolic process [GO:1905167]; positive regulation of neurogenesis [GO:0050769]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; protein transport [GO:0015031]; pulmonary artery morphogenesis [GO:0061156]; receptor-mediated endocytosis [GO:0006898]; response to leptin [GO:0044321]; retinoid metabolic process [GO:0001523]; secondary heart field specification [GO:0003139]; sensory perception of sound [GO:0007605]; transcytosis [GO:0045056]; transport across blood-brain barrier [GO:0150104]; vagina development [GO:0060068]; ventricular compact myocardium morphogenesis [GO:0003223]; vitamin D metabolic process [GO:0042359]	hit with GO BP
GN007903	Chromosome_2A	803	3	11	33.623910336239106	0.501875	87.01854493580599	11	1	87.01854493580599	11	1	NA	NA	NA	75.45731707317073	14	0.9285714285714286	methylated (>=50%)	Q04833	Low-density lipoprotein receptor-related protein (LRP)	ecdysis, collagen and cuticulin-based cuticle [GO:0042395]; nematode larval development [GO:0002119]; positive regulation of locomotion [GO:0040017]; positive regulation of multicellular organism growth [GO:0040018]; regulation of cell migration [GO:0030334]; sterol transport [GO:0015918]	hit with GO BP
GN007904	Chromosome_2A	5923	4	46	34.49265574877596	0.2641448337909318	67.90443293033967	44	0.7954545454545454	77.67857142857143	7	0.7142857142857143	66.45736946463978	37	0.8108108108108109	1.1436259670366633	49	0	methylated (>=50%)	Q9NWM8	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (22 kDa FK506-binding protein) (22 kDa FKBP) (FKBP-22) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007905	Chromosome_2A	1330	4	35	37.142857142857146	0.7736670655497939	0.17543859649122806	20	0	0	17	0	0.8771929824561403	3	0	1.2797074954296161	46	0	unmethylated (<10%)	P59024	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007906	Chromosome_2A	1151	4	33	37.79322328410078	0.8190227703984819	0.25862068965517243	26	0	0.14450867052023122	17	0	0.42735042735042733	9	0	0.5052327679538073	47	0	unmethylated (<10%)	P59024	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007907	Chromosome_2A	1079	4	33	39.01760889712697	0.8052238805970149	0.37965072133637057	32	0	0.4340277777777778	27	0	0	5	0	0.6511123168746609	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007908	Chromosome_2A	1330	4	36	37.29323308270677	0.7892784728747342	0.9363295880149812	23	0	0.4366812227074236	20	0	3.9473684210526314	3	0	0.49188391539596654	31	0	unmethylated (<10%)	P59024	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007909	Chromosome_2A	1150	4	35	38.17391304347826	0.8497297753757811	0.36523009495982467	28	0	0.4694835680751174	19	0	0.19342359767891681	9	0	0.3787878787878788	48	0	unmethylated (<10%)	P59024	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007910	Chromosome_2A	1082	4	33	39.46395563770795	0.7856105610561056	0.27266530334015	33	0	0.3074558032282859	28	0	0	5	0	0.7452258965999069	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007911	Chromosome_2A	3478	4	73	35.62392179413456	0.6616854483096521	0.676056338028169	73	0	1.212686567164179	30	0	0.44390637610976597	43	0	0.4447739065974796	43	0	unmethylated (<10%)	Q9NWM8	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (22 kDa FK506-binding protein) (22 kDa FKBP) (FKBP-22) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007912	Chromosome_2A	4593	4	135	36.57740039190072	0.8789421310471525	0.6064474944142993	130	0	0.7389162561576355	31	0	0.5744849445324881	99	0	0.32243205895900506	47	0	unmethylated (<10%)	P59024	Peptidyl-prolyl cis-trans isomerase FKBP14 (PPIase FKBP14) (EC 5.2.1.8) (FK506-binding protein 14) (FKBP-14) (Rotamase)	NA	hit, no GO BP
GN007913	Chromosome_2A	636	1	22	44.18238993710692	0.7103259214133415	0.5807200929152149	22	0	0.5807200929152149	22	0	NA	NA	NA	0.7083333333333334	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007914	Chromosome_2A	19698	13	261	35.27261650929028	0.42732614969279464	79.39159577210621	261	0.9310344827586207	92.62472885032538	43	0.9767441860465116	77.60678759508484	218	0.9220183486238532	1.3093788063337393	49	0	methylated (>=50%)	O08688	Calpain-5 (EC 3.4.22.-) (New calpain 3) (nCL-3)	proteolysis [GO:0006508]	hit with GO BP
GN007915	Chromosome_2A	42883	34	634	35.09549238626029	0.4811150233962912	90.16110986797942	626	0.9760383386581469	94.11159681151968	67	0.9701492537313433	89.78456410382098	559	0.9767441860465116	57.95135640785781	59	0.5254237288135594	methylated (>=50%)	O42131	DNA topoisomerase 2-beta (EC 5.6.2.2) (DNA topoisomerase II, beta isozyme)	B cell differentiation [GO:0030183]; DNA topological change [GO:0006265]; resolution of meiotic recombination intermediates [GO:0000712]; sister chromatid segregation [GO:0000819]	hit with GO BP
GN007916	Chromosome_2A	7310	5	100	34.11764705882353	0.47194021660183677	84.09429616583118	100	0.86	80.39772727272727	8	0.875	84.27941385687865	92	0.8586956521739131	38.444526354589016	42	0.42857142857142855	methylated (>=50%)	P60604	Ubiquitin-conjugating enzyme E2 G2 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme G2) (Ubiquitin carrier protein G2) (Ubiquitin-protein ligase G2)	cellular response to interferon-beta [GO:0035458]; ERAD pathway [GO:0036503]; negative regulation of retrograde protein transport, ER to cytosol [GO:1904153]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN007917	Chromosome_2A	17718	13	180	34.625804266847275	0.3400240568374236	78.12472743131269	180	0.8944444444444445	86.26721250465202	58	1	75.63226247436774	122	0.8442622950819673	56.03917301414581	13	0.6153846153846154	methylated (>=50%)	Q5R8X7	Mitogen-activated protein kinase kinase kinase 13 (EC 2.7.11.25)	JNK cascade [GO:0007254]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; stress-activated MAPK cascade [GO:0051403]	hit with GO BP
GN007918	Chromosome_2A	3735	2	136	39.97322623828648	0.9143536019008532	1.0596546310832025	136	0	0.6211180124223602	30	0	1.1230907457322552	106	0	23.84180790960452	16	0.1875	unmethylated (<10%)	A0LMC1	Phosphonoacetaldehyde hydrolase (Phosphonatase) (EC 3.11.1.1) (Phosphonoacetaldehyde phosphonohydrolase)	DNA repair [GO:0006281]; organic phosphonate catabolic process [GO:0019700]	hit with GO BP
GN007919	Chromosome_2A	4957	5	47	35.94916280008069	0.29350538750612576	85.26970954356847	47	0.9574468085106383	93.72325249643367	15	1	82.56503879507075	32	0.9375	86.42857142857143	15	1	methylated (>=50%)	Q63850	Nuclear pore glycoprotein p62 (62 kDa nucleoporin) (Nucleoporin Nup62)	cell migration [GO:0016477]; cell surface receptor signaling pathway [GO:0007166]; cellular senescence [GO:0090398]; centriole assembly [GO:0098534]; centrosome cycle [GO:0007098]; mitotic centrosome separation [GO:0007100]; mitotic metaphase chromosome alignment [GO:0007080]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of MAP kinase activity [GO:0043407]; negative regulation of programmed cell death [GO:0043069]; negative regulation of Ras protein signal transduction [GO:0046580]; nucleocytoplasmic transport [GO:0006913]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of centriole replication [GO:0046601]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of mitotic cytokinetic process [GO:1903438]; positive regulation of mitotic nuclear division [GO:0045840]; positive regulation of protein localization to centrosome [GO:1904781]; protein import into nucleus [GO:0006606]; regulation of mitotic spindle organization [GO:0060236]; regulation of protein import into nucleus [GO:0042306]; RNA export from nucleus [GO:0006405]	hit with GO BP
GN007920	Chromosome_2A	390	1	3	42.56410256410256	0.17557022809123649	100	1	1	100	1	1	NA	NA	NA	85.7685009487666	26	0.9615384615384616	NA	NA	NA	NA	no Swiss-Prot hit
GN007921	Chromosome_2A	1098	1	35	50	0.5250860796851943	1.2096774193548387	28	0	1.2096774193548387	28	0	NA	NA	NA	0.5266237565827969	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007922	Chromosome_2A	339	1	14	45.13274336283186	0.8118371536093055	0.8298755186721992	14	0	0.8298755186721992	14	0	NA	NA	NA	0.7551919446192574	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007923	Chromosome_2A	1913	3	15	34.34396236278097	0.2659850577482805	1.5488867376573088	15	0	1.7777777777777777	10	0	1.1173184357541899	5	0	0.6428801028608164	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007924	Chromosome_2A	14592	18	388	36.60910087719298	0.7953646659029145	0.864897107068297	386	0	0.4960864292801235	170	0	1.167737847379379	216	0	0.6716417910447762	26	0	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN007925	Chromosome_2A	19614	21	265	35.57662893851331	0.4271217912308105	83.29621380846325	264	0.9621212121212122	89.23591745677635	32	1	82.65527202696197	232	0.9568965517241379	87.47731397459165	22	0.8636363636363636	methylated (>=50%)	Q5R5L3	Endoplasmic reticulum disulfide reductase DNAJC10 (EC 1.8.4.2) (DnaJ homolog subfamily C member 10)	ERAD pathway [GO:0036503]; IRE1-mediated unfolded protein response [GO:0036498]; protein folding in endoplasmic reticulum [GO:0034975]	hit with GO BP
GN007926	Chromosome_2A	10267	6	115	36.20337002045388	0.34232739894904457	80.2154903185509	108	0.8333333333333334	78.68852459016394	10	0.9	80.41255289139633	98	0.826530612244898	64.8249027237354	54	0.6851851851851852	methylated (>=50%)	Q9QZB9	Dynactin subunit 5 (Dynactin subunit p25)	aorta development [GO:0035904]; coronary vasculature development [GO:0060976]; ventricular septum development [GO:0003281]	hit with GO BP
GN007927	Chromosome_2A	225	1	7	38.666666666666664	0.8513513513513513	17.695473251028808	7	0	17.695473251028808	7	0	NA	NA	NA	3.0700241462573303	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007928	Chromosome_2A	858	1	33	53.03030303030303	1.0891675642406524	0.9561752988047809	30	0	0.9561752988047809	30	0	NA	NA	NA	0.8375988832014891	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007929	Chromosome_2A	10427	13	242	34.59288385921166	0.7768751523988503	0.569432844886493	240	0	0.6006006006006006	119	0	0.5482595945429045	121	0	0.33682634730538924	51	0	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN007930	Chromosome_2A	1272	1	55	40.723270440251575	1.0474308300395256	0.3014065639651708	55	0	0.3014065639651708	55	0	NA	NA	NA	2.946224256292906	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007931	Chromosome_2A	7747	6	208	34.568219956112046	0.898828170321383	0.7215874924834637	206	0	0.4276550249465431	30	0	0.7618675522563001	176	0	0.474462740720067	59	0	unmethylated (<10%)	Q6F6U3	Nicotinamidase (EC 3.5.1.19) (Nicotinamide deamidase) (NAMase)	NA	hit, no GO BP
GN007932	Chromosome_2A	1580	4	48	41.32911392405063	0.7114313052287949	0.37936267071320184	48	0	0.4780114722753346	38	0	0	10	0	0.42771599657827203	32	0	unmethylated (<10%)	P50170	Retinol dehydrogenase 16 (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.315) (EC 1.1.1.53) (29 kDa protein) (Retinol dehydrogenase 2) (Retinol dehydrogenase type 1) (Retinol dehydrogenase type II) (RODH II)	androgen biosynthetic process [GO:0006702]; positive regulation of retinoic acid biosynthetic process [GO:1900054]; response to resveratrol [GO:1904638]; retinoic acid metabolic process [GO:0042573]; retinol metabolic process [GO:0042572]; steroid metabolic process [GO:0008202]	hit with GO BP
GN007933	Chromosome_2A	369	1	17	44.173441734417345	0.9444444444444444	0.5012531328320802	17	0	0.5012531328320802	17	0	NA	NA	NA	1.6469942355201757	57	0	unmethylated (<10%)	O54753	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.239) (EC 1.1.1.53) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)	androgen metabolic process [GO:0008209]; brexanolone catabolic process [GO:0062175]; estrogen biosynthetic process [GO:0006703]; retinol metabolic process [GO:0042572]	hit with GO BP
GN007934	Chromosome_2A	6760	5	98	35.50295857988166	0.464702581369248	1.6331181162172428	98	0	0.6433823529411765	45	0	2.3300970873786406	53	0	0.8006742520016856	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007935	Chromosome_2A	2058	1	97	45.6754130223518	0.9064679598953792	0.9491733006736068	97	0	0.9491733006736068	97	0	NA	NA	NA	0.44570502431118314	47	0	unmethylated (<10%)	Q80VI1	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	antiviral innate immune response [GO:0140374]; cGAS/STING signaling pathway [GO:0140896]; defense response to virus [GO:0051607]; host-mediated suppression of symbiont invasion [GO:0046597]; innate immune response [GO:0045087]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN007936	Chromosome_2A	17003	16	169	35.66429453625831	0.31409586901813336	77.2379269729093	168	0.875	76.26443647949024	48	0.8958333333333334	77.55633711085059	120	0.8666666666666667	65.01182033096927	46	0.717391304347826	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007937	Chromosome_2A	24438	9	199	35.82126196906457	0.25477716149452556	83.49690082644628	191	0.9109947643979057	58.46774193548387	16	0.5625	85.20971302428256	175	0.9428571428571428	58.17524841915086	35	0.5428571428571428	methylated (>=50%)	Q28HC6	Queuine tRNA-ribosyltransferase catalytic subunit 1 (EC 2.4.2.64) (Guanine insertion enzyme) (tRNA-guanine transglycosylase)	tRNA wobble guanine modification [GO:0002099]	hit with GO BP
GN007938	Chromosome_2A	3554	4	102	36.18458075407991	0.876798606827994	0.5515067953515855	102	0	0.8708272859216255	18	0	0.5013673655423884	84	0	6.378802747791953	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007939	Chromosome_2A	987	1	16	42.14792299898683	0.37175141242937854	96.60441426146011	16	1	96.60441426146011	16	1	NA	NA	NA	90.12933968686181	19	1	methylated (>=50%)	Q28GD4	ELAV-like protein 2 (Protein ElrB)	intracellular mRNA localization [GO:0008298]	hit with GO BP
GN007940	Chromosome_2A	942	1	24	44.904458598726116	0.5062248096730856	97.72256728778468	24	1	97.72256728778468	24	1	NA	NA	NA	94.20520999468368	21	1	methylated (>=50%)	Q28FX0	ELAV-like protein 3 (Protein ElrC)	intracellular mRNA localization [GO:0008298]	hit with GO BP
GN007941	Chromosome_2A	1038	1	22	38.63198458574181	0.5686538174211864	93.33333333333333	22	1	93.33333333333333	22	1	NA	NA	NA	74.91444216290212	43	0.7674418604651163	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007942	Chromosome_2A	615	1	32	43.2520325203252	1.1533052039381153	24.836244541484717	32	0.0625	24.836244541484717	32	0.0625	NA	NA	NA	89.1213389121339	38	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007943	Chromosome_2A	10756	9	132	35.80327259204165	0.38333718526646376	75.23329877055251	123	0.8373983739837398	88.34841628959276	17	1	73.25720129538094	106	0.8113207547169812	50.53946621237933	37	0.5675675675675675	methylated (>=50%)	Q92600	CCR4-NOT transcription complex subunit 9 (Cell differentiation protein RQCD1 homolog) (Rcd-1)	negative regulation of intracellular estrogen receptor signaling pathway [GO:0033147]; negative regulation of translation [GO:0017148]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; sex differentiation [GO:0007548]	hit with GO BP
GN007944	Chromosome_2A	732	1	31	45.62841530054645	0.8143841515934539	0.2656042496679947	31	0	0.2656042496679947	31	0	NA	NA	NA	2.661064425770308	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007945	Chromosome_2A	3407	4	42	37.3936014088641	0.3541159351428402	88.21975699947174	42	0.9523809523809523	93.97810218978103	10	1	85.8736059479554	32	0.9375	80	13	0.9230769230769231	methylated (>=50%)	Q17QB7	Ras-related protein Rab-30 (EC 3.6.5.2)	Golgi organization [GO:0007030]; lipid homeostasis [GO:0055088]; Rab protein signal transduction [GO:0032482]	hit with GO BP
GN007946	Chromosome_2A	13267	12	177	36.50410793698651	0.40341022707360563	85.55731291101307	175	0.9714285714285714	94.32334241598546	50	1	83.58984812965039	125	0.96	84.49704142011835	15	1	methylated (>=50%)	G3X9Z4	Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA cleavage complex II protein Pcf11)	mRNA 3'-end processing [GO:0031124]; regulation of mRNA 3'-end processing [GO:0031440]; termination of RNA polymerase II transcription [GO:0006369]	hit with GO BP
GN007947	Chromosome_2A	3759	2	67	37.004522479382814	0.5211564009286964	75.4880694143167	59	0.7627118644067796	46.79399727148704	14	0.5714285714285714	83.92141138732958	45	0.8222222222222222	51.83639398998331	51	0.5294117647058824	methylated (>=50%)	O35963	Ras-related protein Rab-33B (EC 3.6.5.2)	autophagosome assembly [GO:0000045]; intra-Golgi vesicle-mediated transport [GO:0006891]; negative regulation of constitutive secretory pathway [GO:1903434]; protein localization to Golgi apparatus [GO:0034067]; protein localization to phagophore assembly site [GO:0034497]; Rab protein signal transduction [GO:0032482]; regulation of exocytosis [GO:0017157]; regulation of Golgi organization [GO:1903358]; regulation of retrograde vesicle-mediated transport, Golgi to ER [GO:2000156]; skeletal system morphogenesis [GO:0048705]	hit with GO BP
GN007948	Chromosome_2A	42604	14	567	34.534316026664165	0.4464836599683586	81.21748051884603	545	0.9504587155963303	77.4555659494855	21	0.9047619047619048	81.31835055683756	524	0.9522900763358778	88.05132317562149	16	1	methylated (>=50%)	A0A0R4IAX5	Ureidoglycolate lyase (EC 4.3.2.3) (Malate synthase-like) (MLSL) (MSL)	glyoxylate cycle [GO:0006097]; urate catabolic process [GO:0019628]	hit with GO BP
GN007949	Chromosome_2A	1365	1	13	40.586080586080584	0.23316777041942605	92.49492900608519	13	1	92.49492900608519	13	1	NA	NA	NA	92.52032520325203	16	1	methylated (>=50%)	Q04861	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]	canonical NF-kappaB signal transduction [GO:0007249]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN007950	Chromosome_2A	1966	2	20	36.52085452695829	0.30542889767510506	87.4487284659557	20	0.95	NA	NA	NA	87.4487284659557	20	0.95	74.71264367816092	5	1	methylated (>=50%)	Q9NPJ8	NTF2-related export protein 2 (Protein p15-2)	poly(A)+ mRNA export from nucleus [GO:0016973]	hit with GO BP
GN007951	Chromosome_2A	819	1	31	42.857142857142854	0.8307918848167539	1.0582010582010581	31	0	1.0582010582010581	31	0	NA	NA	NA	0.2077562326869806	36	0	unmethylated (<10%)	A1A4M4	Putative deoxyribonuclease TATDN3 (EC 3.1.21.-)	NA	hit, no GO BP
GN007952	Chromosome_2A	7054	13	175	37.08534165012759	0.7263059916640583	1.7331589274035317	175	0	2.3625254582484727	110	0	1.0084427767354596	65	0	0.487012987012987	59	0	unmethylated (<10%)	Q99ME3	Synphilin-1 (Alpha-synuclein-interacting protein)	dopamine metabolic process [GO:0042417]; regulation of inclusion body assembly [GO:0090083]; regulation of neurotransmitter secretion [GO:0046928]	hit with GO BP
GN007953	Chromosome_2A	31896	28	792	35.14547278655631	0.804100302835932	0.6912870000927902	792	0	0.528169014084507	118	0	0.7189365165491047	674	0	0.8157211716722284	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007954	Chromosome_2A	738	1	41	37.39837398373984	1.5972339527027026	0.6702974444909929	41	0	0.6702974444909929	41	0	NA	NA	NA	2.7925061859314244	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007955	Chromosome_2A	6378	8	157	34.60332392599561	0.8223189429338676	0.5585264408793821	157	0	0.8115942028985508	36	0	0.49327354260089684	121	0	0.6231823847112589	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007956	Chromosome_2A	2766	8	88	39.226319595083154	0.8364536082474227	1.0276905509563232	88	0	0.38095238095238093	50	0	1.5560165975103735	38	0	0.34443168771526983	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007957	Chromosome_2A	10707	15	272	36.00448304847296	0.7866044867428305	0.4709784411276949	272	0	0.4938759383642829	109	0	0.4594027763906921	163	0	0.6066734074823054	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007958	Chromosome_2A	795	1	0	41.509433962264154	0	NA	0	NA	NA	NA	NA	NA	NA	NA	74.48210922787194	14	0.9285714285714286	NA	NA	NA	NA	no Swiss-Prot hit
GN007959	Chromosome_2A	6386	15	42	34.70090823676793	0.2191376559202512	77.32879625691196	42	0.9523809523809523	77.26075504828798	22	1	77.39273927392739	20	0.9	88.16621499548329	19	0.9473684210526315	methylated (>=50%)	Q96G03	Phosphopentomutase (EC 5.4.2.7) (Glucose phosphomutase 2) (Phosphodeoxyribomutase) (Phosphoglucomutase-2) (EC 5.4.2.2)	glycogen biosynthetic process [GO:0005978]; glycogen catabolic process [GO:0005980]; purine ribonucleoside salvage [GO:0006166]	hit with GO BP
GN007960	Chromosome_2A	10113	12	304	39.34539701374469	0.7773491131800963	0.7252872626517807	303	0	0.5914243469689502	60	0	0.7518062878344074	243	0	0.9532062391681109	53	0	unmethylated (<10%)	Q96SL1	Solute carrier family 49 member 4 (Disrupted in renal cancer protein 2) (Disrupted in renal carcinoma protein 2)	pyridoxine transport [GO:0031923]	hit with GO BP
GN007961	Chromosome_2A	1569	1	42	45.06054811982154	0.5283590705729543	2.6129943502824857	42	0	2.6129943502824857	42	0	NA	NA	NA	0.8812856402280974	53	0	unmethylated (<10%)	Q60613	Adenosine receptor A2a	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; astrocyte activation [GO:0048143]; eating behavior [GO:0042755]; excitatory postsynaptic potential [GO:0060079]; G protein-coupled adenosine receptor signaling pathway [GO:0001973]; G protein-coupled receptor signaling pathway [GO:0007186]; inhibition of non-skeletal tissue mineralization [GO:0140928]; inhibitory postsynaptic potential [GO:0060080]; locomotory behavior [GO:0007626]; membrane depolarization [GO:0051899]; negative regulation of alpha-beta T cell activation [GO:0046636]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of inflammatory response [GO:0050728]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of protein kinase activity [GO:0006469]; negative regulation of vascular permeability [GO:0043116]; neuron projection morphogenesis [GO:0048812]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of acetylcholine secretion, neurotransmission [GO:0014057]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of glutamate secretion [GO:0014049]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of protein secretion [GO:0050714]; positive regulation of synaptic transmission, GABAergic [GO:0032230]; positive regulation of synaptic transmission, glutamatergic [GO:0051968]; positive regulation of urine volume [GO:0035810]; prepulse inhibition [GO:0060134]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of calcium ion transport [GO:0051924]; regulation of DNA-templated transcription [GO:0006355]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of norepinephrine secretion [GO:0014061]; response to alkaloid [GO:0043279]; response to amphetamine [GO:0001975]; response to caffeine [GO:0031000]; response to purine-containing compound [GO:0014074]; response to xenobiotic stimulus [GO:0009410]; synaptic transmission, cholinergic [GO:0007271]; synaptic transmission, dopaminergic [GO:0001963]; synaptic transmission, glutamatergic [GO:0035249]; vasodilation [GO:0042311]	hit with GO BP
GN007962	Chromosome_2A	16424	30	393	37.171212859230394	0.6935366648773009	1.6474554153979992	376	0	1.5682478218780251	125	0	1.6783851213427081	251	0	0.9267563527653214	65	0	unmethylated (<10%)	Q299G2	Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1)	axon guidance [GO:0007411]; cell projection assembly [GO:0030031]; chaeta development [GO:0022416]; cortical actin cytoskeleton organization [GO:0030866]; regulation of actin filament polymerization [GO:0030833]; regulation of cell shape [GO:0008360]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN007963	Chromosome_2A	234	1	12	50.85470085470085	0.8	0.6134969325153374	12	0	0.6134969325153374	12	0	NA	NA	NA	0.5199306759098787	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007964	Chromosome_2A	654	2	16	39.75535168195719	0.6244927190260205	0.62402496099844	16	0	0.7067137809187279	15	0	0	1	0	0.5471380471380471	48	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN007965	Chromosome_2A	909	2	17	36.41364136413642	0.5738636363636364	0.2014098690835851	17	0	0.45248868778280543	4	0	0.12953367875647667	13	0	0.9082652134423251	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007966	Chromosome_2A	2280	2	54	39.780701754385966	0.5992640616786402	0.8801624915368991	54	0	0.9188361408882083	27	0	0.8495145631067961	27	0	1.075268817204301	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007967	Chromosome_2A	1050	1	16	41.23809523809524	0.361352490751097	92.9460580912863	16	1	92.9460580912863	16	1	NA	NA	NA	88.05668016194332	19	0.8947368421052632	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007968	Chromosome_2A	1007	3	11	32.17477656405164	0.4370659722222222	79.96051332675222	11	1	89.66346153846153	5	1	73.19932998324958	6	1	71.58385093167702	8	0.875	methylated (>=50%)	Q4V7B8	RING finger protein 44	protein ubiquitination [GO:0016567]	hit with GO BP
GN007969	Chromosome_2A	7530	11	106	36.69322709163347	0.4211582723108144	81.93291265360345	106	0.8962264150943396	78.42227378190255	42	0.8095238095238095	83.88931988621671	64	0.953125	1.0317460317460319	44	0	methylated (>=50%)	Q91VE0	Long-chain fatty acid transport protein 4 (FATP-4) (Fatty acid transport protein 4) (Arachidonate--CoA ligase) (EC 6.2.1.15) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Solute carrier family 27 member 4) (Very long-chain acyl-CoA synthetase 4) (ACSVL4) (EC 6.2.1.-)	fatty acid metabolic process [GO:0006631]; fatty acid transport [GO:0015908]; glucose import in response to insulin stimulus [GO:0044381]; lipid transport across blood-brain barrier [GO:1990379]; long-chain fatty acid import into cell [GO:0044539]; long-chain fatty acid metabolic process [GO:0001676]; long-chain fatty acid transport [GO:0015909]; medium-chain fatty acid transport [GO:0001579]; negative regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity [GO:0062003]; negative regulation of insulin receptor signaling pathway [GO:0046627]; positive regulation of apoptotic process [GO:0043065]; response to nutrient [GO:0007584]; skin development [GO:0043588]; very long-chain fatty acid catabolic process [GO:0042760]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN007970	Chromosome_2A	7225	5	197	35.792387543252595	0.8513987446680094	0.6601017205930094	197	0	0.5461165048543689	49	0	0.6848413011984723	148	0	0.9104704097116844	81	0	unmethylated (<10%)	Q9XWN7	Nucleoside hydrolase (EC 3.2.2.-) (EC 3.2.2.1) (EC 3.2.2.2) (EC 3.2.2.3) (EC 3.2.2.7) (EC 3.2.2.8)	purine nucleoside catabolic process [GO:0006152]	hit with GO BP
GN007971	Chromosome_2A	4205	2	131	39.45303210463734	0.8218674281758394	0.946969696969697	131	0	0.44398907103825136	87	0	2.0833333333333335	44	0	3.4232365145228214	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007972	Chromosome_2A	983	2	32	39.36927772126145	0.8601115607568631	0.13764624913971094	32	0	0.1516300227445034	29	0	0	3	0	0.314070351758794	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007973	Chromosome_2A	5178	9	95	36.848203939745076	0.5471192571163542	92.10526315789474	95	1	92.83387622149837	21	1	91.89631013545072	74	1	66.93489392831017	18	0.7777777777777778	methylated (>=50%)	Q5WR10	Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56)	mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN007974	Chromosome_2A	3007	9	86	39.47455936148986	0.7367956191485603	0.7624633431085044	86	0	1.0796221322537112	42	0	0.5186721991701245	44	0	1.340033500837521	37	0	unmethylated (<10%)	Q8VDW0	ATP-dependent RNA helicase DDX39A (EC 3.6.4.13) (DEAD box protein 39)	cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of innate immune response [GO:0045824]; negative regulation of RNA export from nucleus [GO:0046832]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN007975	Chromosome_2A	213	1	11	45.539906103286384	1.0047169811320755	0.684931506849315	11	0	0.684931506849315	11	0	NA	NA	NA	1.4242115971515767	29	0	unmethylated (<10%)	Q27268	ATP-dependent RNA helicase WM6 (DEAD box protein UAP56) (Dmrnahel) (EC 3.6.4.13) (HEL/UAP56)	chromatin remodeling [GO:0006338]; mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]; piRNA processing [GO:0034587]; positive regulation of piRNA transcription [GO:0140543]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; secondary piRNA processing [GO:0140965]	hit with GO BP
GN007976	Chromosome_2A	8067	2	148	38.824841948679804	0.4890012041580314	37.94838500243467	145	0.3103448275862069	0.20920502092050208	10	0	41.122646489530176	135	0.3333333333333333	1.0443864229765014	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007977	Chromosome_2A	1044	1	49	46.74329501915709	0.8601694915254238	0.760043431053203	45	0	0.760043431053203	45	0	NA	NA	NA	0.43343653250773995	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007978	Chromosome_2A	15197	7	242	34.03961308152925	0.5498567524596982	82.98639858072147	241	0.921161825726141	43.02030456852792	20	0.4	84.93983376752264	221	0.9683257918552036	52.99671592775041	36	0.5833333333333334	methylated (>=50%)	Q9D818	Suppressor APC domain-containing protein 2 (Protein Ang)	establishment of mitotic spindle orientation [GO:0000132]; negative regulation of protein localization to cell cortex [GO:1904777]; positive regulation of cell population proliferation [GO:0008284]; regulation of establishment of planar polarity [GO:0090175]; symmetric cell division [GO:0098725]	hit with GO BP
GN007979	Chromosome_2A	35649	12	763	36.14407136245056	0.6554129897527847	51.84834123222749	510	0.37450980392156863	81.36531365313652	47	0.7659574468085106	47.78968732162111	463	0.3347732181425486	90.81735620585268	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007980	Chromosome_2A	4204	6	132	39.938154138915316	0.7874022004716512	0.8930198651357755	132	0	0.9349030470914127	80	0	0.8464794151596768	52	0	0.730554361839278	53	0	unmethylated (<10%)	F4KD71	Urea-proton symporter DUR3 (AtDUR3) (High-affinity urea active transporter DUR3)	cellular response to nitrogen starvation [GO:0006995]; urea transmembrane transport [GO:0071918]	hit with GO BP
GN007981	Chromosome_2A	2223	3	28	32.88349077822762	0.4687824790251397	67.6056338028169	28	0.75	59.16955017301038	9	0.6666666666666666	71.45110410094637	19	0.7894736842105263	0.47206923682140045	68	0	methylated (>=50%)	Q6P0F0	ER membrane protein complex subunit 6 (Transmembrane protein 93)	autophagosome assembly [GO:0000045]; protein insertion into ER membrane by stop-transfer membrane-anchor sequence [GO:0045050]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN007982	Chromosome_2A	12405	9	144	37.09794437726723	0.3412540003239995	64.63111760409058	142	0.7394366197183099	82.91793313069908	40	0.95	58.84615384615385	102	0.6568627450980392	45.121321631388746	27	0.4444444444444444	methylated (>=50%)	Q96PQ7	Kelch-like protein 5	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN007983	Chromosome_2A	43738	55	490	34.29283460606338	0.3839015022257618	70.69946568593436	433	0.836027713625866	81.2242883001481	124	0.9516129032258065	67.88744779072323	309	0.7896440129449838	8.43644544431946	41	0.07317073170731707	methylated (>=50%)	Q86TZ1	Tetratricopeptide repeat protein 6 (TPR repeat protein 6)	NA	hit, no GO BP
GN007984	Chromosome_2A	5203	6	65	35.44109167787815	0.39901059953939666	82.75261324041811	65	0.9384615384615385	82.49063670411985	19	0.9473684210526315	82.87037037037037	46	0.9347826086956522	94.1747572815534	1	1	methylated (>=50%)	Q68EV6	Large ribosomal subunit protein bL28m (39S ribosomal protein L28, mitochondrial) (L28mt) (MRP-L28)	NA	hit, no GO BP
GN007985	Chromosome_2A	734	2	28	42.77929155313352	1.1572072072072073	0.9174311926605505	28	0	0.9489916963226572	24	0	0.7246376811594203	4	0	0.5319148936170213	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007986	Chromosome_2A	6243	2	117	36.456831651449626	0.5641774859174021	18.734177215189874	117	0.10256410256410256	5.476190476190476	74	0	31.1358574610245	43	0.27906976744186046	0.556930693069307	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007987	Chromosome_2A	249	1	4	42.570281124497996	0.3547008547008547	0	4	0	0	4	0	NA	NA	NA	0.46461758398856323	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN007988	Chromosome_2A	25441	5	594	33.52855626744232	0.8346858079396029	0.7465167588478859	566	0	0.38095238095238093	30	0	0.7584979867028748	536	0	0.40860800871697084	50	0	unmethylated (<10%)	Q99453	Paired mesoderm homeobox protein 2B (Neuroblastoma Phox) (NBPhox) (PHOX2B homeodomain protein) (Paired-like homeobox 2B)	autonomic nervous system development [GO:0048483]; brainstem development [GO:0003360]; cell differentiation in hindbrain [GO:0021533]; cellular response to BMP stimulus [GO:0071773]; dopaminergic neuron differentiation [GO:0071542]; efferent axon development in a lateral line nerve [GO:0048894]; enteric nervous system development [GO:0048484]; glial cell differentiation [GO:0010001]; hindbrain tangential cell migration [GO:0021934]; inner ear development [GO:0048839]; medullary reticular formation development [GO:0021723]; neural crest cell migration involved in autonomic nervous system development [GO:1901166]; neuron development [GO:0048666]; neuron migration [GO:0001764]; noradrenergic neuron development [GO:0003358]; noradrenergic neuron differentiation [GO:0003357]; parasympathetic nervous system development [GO:0048486]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; regulation of respiratory gaseous exchange by nervous system process [GO:0002087]; regulation of transcription by RNA polymerase II [GO:0006357]; respiratory system development [GO:0060541]; retrotrapezoid nucleus neuron differentiation [GO:0061452]; sympathetic ganglion development [GO:0061549]; sympathetic nervous system development [GO:0048485]	hit with GO BP
GN007989	Chromosome_2A	4230	5	115	35.7919621749409	0.8511394017440965	0.6939424606043082	115	0	0.7777057679844459	39	0	0.6698920729438035	76	0	0.5538461538461539	54	0	unmethylated (<10%)	P51521	Transcriptional regulator ovo (Transcriptional repressor shavenbaby) (Transcriptional repressor svb) [Cleaved into: Transcriptional activator shavenbaby (Transcriptional activator svb)]	adult feeding behavior [GO:0008343]; cuticle pattern formation [GO:0035017]; cuticle pigmentation [GO:0048067]; cytoskeleton organization [GO:0007010]; epidermal cell differentiation [GO:0009913]; germ-line sex determination [GO:0018992]; imaginal disc-derived leg joint morphogenesis [GO:0016348]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; non-sensory hair organization [GO:0035316]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; regulation of transcription by RNA polymerase II [GO:0006357]; transposition [GO:0032196]	hit with GO BP
GN007990	Chromosome_2A	13888	12	292	36.4559331797235	0.6329544312316722	82.61676646706587	274	0.9562043795620438	90.08106819265618	45	0.9777777777777777	81.54488803670479	229	0.9519650655021834	31.19795003203075	52	0.28846153846153844	methylated (>=50%)	Q9JLM8	Serine/threonine-protein kinase DCLK1 (EC 2.7.11.1) (Doublecortin-like and CAM kinase-like 1) (Doublecortin-like kinase 1)	axon extension [GO:0048675]; axonogenesis [GO:0007409]; brain development [GO:0007420]; central nervous system projection neuron axonogenesis [GO:0021952]; dendrite morphogenesis [GO:0048813]; forebrain development [GO:0030900]; intracellular signal transduction [GO:0035556]; negative regulation of protein localization to nucleus [GO:1900181]; neuron migration [GO:0001764]; peptidyl-serine phosphorylation [GO:0018105]; protein phosphorylation [GO:0006468]; regulation of postsynapse assembly [GO:0150052]	hit with GO BP
GN007991	Chromosome_2A	972	1	45	41.56378600823045	1.072190219389631	0.3747870528109029	45	0	0.3747870528109029	45	0	NA	NA	NA	0.4578155657292348	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN007992	Chromosome_2A	1623	1	68	40.54220579174368	1.0199528672427336	0.5150554675118859	68	0	0.5150554675118859	68	0	NA	NA	NA	1.055572803477181	55	0	unmethylated (<10%)	Q62192	CD180 antigen (Lymphocyte antigen 78) (Ly-78) (Radioprotective 105 kDa protein) (CD antigen CD180)	B cell proliferation [GO:0042100]; B cell proliferation involved in immune response [GO:0002322]; cellular response to lipopolysaccharide [GO:0071222]; positive regulation of lipopolysaccharide-mediated signaling pathway [GO:0031666]	hit with GO BP
GN007993	Chromosome_2A	2933	7	71	34.94715308557791	0.7937602439489232	1.2191889742910151	71	0	1.7120622568093384	29	0	0.9646302250803859	42	0	8.329979879275655	42	0	unmethylated (<10%)	P08635	S-acyl fatty acid synthase thioesterase, medium chain (EC 3.1.2.14) (Medium-chain S-acyl fatty acid synthetase thioester hydrolase) (Oleoyl-ACP hydrolase) (Thioesterase II) (Thioesterase domain-containing protein 1)	lipid biosynthetic process [GO:0008610]; medium-chain fatty acid biosynthetic process [GO:0051792]	hit with GO BP
GN007994	Chromosome_2A	4930	10	81	38.29614604462475	0.4483352887352012	50.56765308021589	81	0.49382716049382713	76.85683530678149	23	0.782608695652174	45.07200720072007	58	0.3793103448275862	1.3106159895150722	42	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006119	Chromosome_2A	460	1	16	40.21739130434783	0.8960311663014365	45.554614733276885	16	0.3125	45.554614733276885	16	0.3125	NA	NA	NA	84.81182795698925	24	0.9166666666666666	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN007995	Chromosome_2A	7904	6	141	35.62753036437247	0.5641213317641699	88.93714285714286	140	0.9428571428571428	89.36392075078207	19	0.8947368421052632	88.88461044795277	121	0.9504132231404959	73.29366468323416	54	0.6666666666666666	methylated (>=50%)	P40938	Replication factor C subunit 3 (Activator 1 38 kDa subunit) (A1 38 kDa subunit) (Activator 1 subunit 3) (Replication factor C 38 kDa subunit) (RF-C 38 kDa subunit) (RFC38)	DNA repair [GO:0006281]; DNA replication [GO:0006260]; DNA replication checkpoint signaling [GO:0000076]; DNA strand elongation involved in DNA replication [GO:0006271]; DNA synthesis involved in DNA repair [GO:0000731]; DNA-templated DNA replication [GO:0006261]; positive regulation of DNA-directed DNA polymerase activity [GO:1900264]	hit with GO BP
GN007996	Chromosome_2A	1871	2	21	34.58043826830572	0.376812567132116	66.2936142198815	20	0.75	73.80952380952381	5	0.8	65.08785332314744	15	0.7333333333333333	55.07726269315673	59	0.4915254237288136	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN007997	Chromosome_2A	6797	4	101	37.20759158452258	0.4294315464982879	58.80198233139409	101	0.7425742574257426	66.49916247906198	66	0.8333333333333334	50.64358632933866	35	0.5714285714285714	41.69714703730797	20	0.35	methylated (>=50%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN007998	Chromosome_2A	6633	5	76	37.705412332278	0.3223712230215827	55.59748427672956	75	0.64	71.08721624850656	50	0.84	38.37981407702523	25	0.24	21.25	2	0	methylated (>=50%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN007999	Chromosome_2A	665	3	15	39.849624060150376	0.5782608695652174	94.8644793152639	15	1	97.1774193548387	12	1	89.26829268292683	3	1	72.15384615384616	18	0.7777777777777778	methylated (>=50%)	Q03105	V-type proton ATPase 16 kDa proteolipid subunit c (V-ATPase 16 kDa proteolipid subunit c) (15 kDa mediatophore protein) (Vacuolar proton pump 16 kDa proteolipid subunit c)	NA	hit, no GO BP
GN008000	Chromosome_2A	27784	19	371	35.64641520299453	0.4258707411537696	80.14513312963771	356	0.8707865168539326	82.56172839506173	48	0.8541666666666666	79.74707676664973	308	0.8733766233766234	12.605042016806722	15	0	methylated (>=50%)	Q8BU03	Periodic tryptophan protein 2 homolog	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; ribosomal small subunit assembly [GO:0000028]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN008001	Chromosome_2A	14159	16	316	34.07726534359771	0.7695034582770942	0.8333333333333334	260	0	0.7733770799156315	101	0	0.8674763112238089	159	0	0.4	57	0	unmethylated (<10%)	Q9D5U8	Cyclic nucleotide-binding domain-containing protein 2 (Cyclic nucleotide receptor involved in sperm function)	spermatogenesis [GO:0007283]	hit with GO BP
GN008002	Chromosome_2A	5715	5	176	39.24759405074366	0.800601103508878	0.6045105789351314	176	0	0.5733607762422817	143	0	0.7222222222222222	33	0	0.5477576172543649	47	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN008003	Chromosome_2A	12908	12	332	34.87759528974279	0.8458181358849257	0.5019132336132783	332	0	0.4546746234725774	76	0	0.5119248373885811	256	0	0.8427876823338736	61	0	unmethylated (<10%)	Q96M20	Cyclic nucleotide-binding domain-containing protein 2	spermatogenesis [GO:0007283]	hit with GO BP
GN008004	Chromosome_2A	19049	16	561	35.56617145256969	0.9326772424598512	0.7983893362954735	561	0	0.5999647079583554	104	0	0.8469815479019921	457	0	0.6255212677231026	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008005	Chromosome_2A	4706	6	48	34.551636209094774	0.3429482362050511	68.42295200288704	48	0.8333333333333334	62.09751609935603	19	0.7894736842105263	72.50593824228028	29	0.8620689655172413	0.593607305936073	43	0	methylated (>=50%)	Q9Y365	START domain-containing protein 10 (StARD10) (Antigen NY-CO-28) (PCTP-like protein) (PCTP-L) (Serologically defined colon cancer antigen 28) (StAR-related lipid transfer protein 10)	phosphatidylcholine biosynthetic process [GO:0006656]	hit with GO BP
GN008006	Chromosome_2A	15304	22	156	35.21301620491375	0.33238216798871967	86.15925342382741	155	0.9419354838709677	91.36107193229901	53	1	83.43490304709141	102	0.9117647058823529	60.27149321266968	30	0.8333333333333334	methylated (>=50%)	Q9R279	H(+)/Cl(-) exchange transporter 3 (Chloride channel protein 3) (ClC-3) (Chloride transporter ClC-3)	NA	hit, no GO BP
GN008007	Chromosome_2A	228	1	12	46.49122807017544	1.0178571428571428	91.21004566210046	12	0.9166666666666666	91.21004566210046	12	0.9166666666666666	NA	NA	NA	79.14252607184241	15	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008008	Chromosome_2A	474	1	14	38.18565400843882	0.8286713286713286	0.5617977528089888	14	0	0.5617977528089888	14	0	NA	NA	NA	0.607463118310674	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008009	Chromosome_2A	354	1	12	43.220338983050844	0.7283950617283951	2.4390243902439024	9	0	2.4390243902439024	9	0	NA	NA	NA	4.70383275261324	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008010	Chromosome_2A	18974	4	467	35.206071466216926	0.7945977962358902	1.918847174819871	440	0	0.4222972972972973	24	0	1.9892003494004606	416	0	0.48426150121065376	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008011	Chromosome_2A	11125	8	216	38.570786516853936	0.5283978090071706	73.87601753287414	172	0.9127906976744186	67.23498888065234	21	0.7619047619047619	75.22603978300181	151	0.9337748344370861	71.35428976601277	51	0.9019607843137255	methylated (>=50%)	Q80YG3	Kelch domain-containing protein 1	protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN008012	Chromosome_2A	1065	1	31	39.53051643192488	0.7481644307469181	0.6463527239150508	31	0	0.6463527239150508	31	0	NA	NA	NA	0.20435967302452315	42	0	unmethylated (<10%)	Q9UBM8	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C (EC 2.4.1.145) (N-acetylglucosaminyltransferase IV homolog) (hGnT-IV-H) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVc) (GlcNAc-T IVc) (GnT-IVc) (N-acetylglucosaminyltransferase IVc) (UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVc)	protein N-linked glycosylation [GO:0006487]; viral protein processing [GO:0019082]	hit with GO BP
GN008013	Chromosome_2A	1720	2	53	38.72093023255814	0.8247683844817603	0.7092198581560284	53	0	0.7295466388744137	49	0	0.5102040816326531	4	0	0.3220035778175313	50	0	unmethylated (<10%)	Q8WXK1	Ankyrin repeat and SOCS box protein 15 (ASB-15)	intracellular signal transduction [GO:0035556]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008014	Chromosome_2A	228	1	4	45.175438596491226	0.3441509433962264	0	4	0	0	4	0	NA	NA	NA	0.7131537242472267	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008015	Chromosome_2A	555	1	17	42.52252252252252	0.6776556776556777	0.5813953488372093	17	0	0.5813953488372093	17	0	NA	NA	NA	0.8255933952528379	64	0	unmethylated (<10%)	P57102	Heart- and neural crest derivatives-expressed protein 2 (Deciduum, heart, autonomic nervous system and neural crest derivatives-expressed protein 2) (dHAND)	cardiac muscle cell differentiation [GO:0055007]; cardioblast differentiation [GO:0010002]; cardiocyte differentiation [GO:0035051]; cardiogenic plate morphogenesis [GO:0003142]; determination of intestine left/right asymmetry [GO:0071908]; embryonic heart tube formation [GO:0003144]; embryonic pectoral fin morphogenesis [GO:0035118]; embryonic viscerocranium morphogenesis [GO:0048703]; enteric nervous system development [GO:0048484]; heart contraction [GO:0060047]; heart development [GO:0007507]; heart looping [GO:0001947]; heart morphogenesis [GO:0003007]; noradrenergic neuron differentiation [GO:0003357]; podocyte development [GO:0072015]; polarized epithelial cell differentiation [GO:0030859]; proepicardium development [GO:0003342]; pronephric nephron tubule morphogenesis [GO:0039008]; proximal tubule morphogenesis [GO:0072158]; regulation of transcription by RNA polymerase II [GO:0006357]; sympathetic nervous system development [GO:0048485]; thyroid gland development [GO:0030878]	hit with GO BP
GN008016	Chromosome_2A	10933	10	188	35.196195005945306	0.5566338800181988	76.1323412555082	187	0.8716577540106952	90.22556390977444	16	1	75.42115647290939	171	0.8596491228070176	0.8673653776653415	32	0	methylated (>=50%)	P22232	rRNA 2'-O-methyltransferase fibrillarin (EC 2.1.1.-) (Histone-glutamine methyltransferase) (U6 snRNA 2'-O-methyltransferase fibrillarin)	box C/D sno(s)RNA 3'-end processing [GO:0000494]; ribosomal small subunit biogenesis [GO:0042274]; rRNA methylation [GO:0031167]	hit with GO BP
GN008017	Chromosome_2A	1561	2	58	42.344650864830236	0.8346516215867397	0.5799903334944417	58	0	0.5058168942842691	56	0	2.1739130434782608	2	0	0.24407252440725244	43	0	unmethylated (<10%)	O15344	E3 ubiquitin-protein ligase MID1 (EC 2.3.2.27) (Midin) (Putative transcription factor XPRF) (RING finger protein 59) (RING finger protein Midline-1) (RING-type E3 ubiquitin transferase Midline-1) (Tripartite motif-containing protein 18)	microtubule cytoskeleton organization [GO:0000226]; pattern specification process [GO:0007389]; positive regulation of stress-activated MAPK cascade [GO:0032874]; protein localization to microtubule [GO:0035372]; regulation of microtubule cytoskeleton organization [GO:0070507]	hit with GO BP
GN008018	Chromosome_2A	1767	4	41	34.5217883418223	0.7832446808510638	0.538971807628524	41	0	0.625	16	0	0.4820936639118457	25	0	0.2621231979030144	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008019	Chromosome_2A	531	2	12	38.4180790960452	0.6126923076923076	0.1893939393939394	12	0	0.3021148036253776	9	0	0	3	0	0.4642857142857143	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008020	Chromosome_2A	264	1	6	44.696969696969695	0.455565142364107	1.6	6	0	1.6	6	0	NA	NA	NA	0.5015045135406219	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008021	Chromosome_2A	717	1	25	45.74616457461646	0.6684691404064889	1.2544802867383513	21	0	1.2544802867383513	21	0	NA	NA	NA	1.3114754098360655	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008022	Chromosome_2A	6595	5	173	35.25398028809704	0.8444489675079565	0.6731813246471227	173	0	0.6156552330694811	44	0	0.6920415224913494	129	0	0.4957713619130942	59	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN008023	Chromosome_2A	1551	1	52	42.16634429400387	0.773061881757534	0.42735042735042733	52	0	0.42735042735042733	52	0	NA	NA	NA	0.5598755832037325	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008024	Chromosome_2A	10768	5	185	36.44130757800892	0.5189282686023233	80.01556554825319	182	0.8791208791208791	89.5085066162571	23	0.9565217391304348	79.05958499904817	159	0.8679245283018868	91.67105956773854	55	0.9454545454545454	methylated (>=50%)	P38552	Galectin-4 (Gal-4) (L-36 lactose-binding protein) (L36LBP) (Lactose-binding lectin 4)	antibacterial peptide biosynthetic process [GO:0002780]; defense response to bacterium [GO:0042742]	hit with GO BP
GN008025	Chromosome_2A	4507	4	145	36.831595296205904	0.9589305418603559	0.5331599479843954	145	0	0.4861111111111111	37	0	0.544	108	0	2.385008517887564	44	0	unmethylated (<10%)	Q29058	Galectin-4 (Gal-4) (L-36 lactose-binding protein) (L36LBP) (Lactose-binding lectin 4)	NA	hit, no GO BP
GN008026	Chromosome_2A	162	1	5	51.23456790123457	0.5465587044534413	1.9607843137254901	5	0	1.9607843137254901	5	0	NA	NA	NA	0.9389671361502347	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008027	Chromosome_2A	4378	3	136	40.45226130653266	0.7608561753242604	0.9981666327154206	134	0	0.9974259974259975	101	0	0.9994447529150472	33	0	0.7524649714582252	50	0	unmethylated (<10%)	P86952	Tyrosinase-like protein (Tyrosinase-2)	NA	hit, no GO BP
GN008028	Chromosome_2A	26749	23	349	33.350779468391345	0.4704215087934053	80.70741936681142	348	0.9224137931034483	82.10180623973727	29	0.9310344827586207	80.60598821468386	319	0.9216300940438872	15.334207077326344	42	0.21428571428571427	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008029	Chromosome_2A	36606	17	356	34.016281483909744	0.3378692262490195	82.19044385979801	353	0.9320113314447592	77.0674486803519	36	0.9166666666666666	82.59000045743562	317	0.9337539432176656	12.01345506967804	31	0.03225806451612903	methylated (>=50%)	G8JYB2	Alpha-catulin	cell adhesion [GO:0007155]; regulation of locomotion [GO:0040012]; Rho protein signal transduction [GO:0007266]	hit with GO BP
GN008030	Chromosome_2A	22055	8	243	34.09657673996826	0.3794986540363614	59.45518105665853	241	0.6887966804979253	65.1105651105651	23	0.8260869565217391	59.13431379382449	218	0.6743119266055045	15.637860082304528	28	0.17857142857142858	methylated (>=50%)	Q93654	General receptor for phosphoinositides 1-associated scaffold protein 1 homolog	NA	hit, no GO BP
GN008031	Chromosome_2A	4769	5	139	36.40176137555043	0.8808211187337477	0.8787587532610188	139	0	0.45248868778280543	39	0	0.9736444519053215	100	0	1.931745009658725	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008032	Chromosome_2A	521	2	24	42.41842610364683	1.0276134122287968	0.6666666666666666	24	0	0.6666666666666666	24	0	NA	NA	NA	0.4433934377771209	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008033	Chromosome_2A	4414	6	106	34.34526506570005	0.8144194952132289	0.6283819165648455	105	0	0.2801120448179272	22	0	0.7084585659081151	83	0	0.4969307220111079	52	0	unmethylated (<10%)	Q96SJ8	Tetraspanin-18 (Tspan-18)	calcium-ion regulated exocytosis [GO:0017156]; calcium-mediated signaling [GO:0019722]; inflammatory response [GO:0006954]; protein localization to cell periphery [GO:1990778]; regulation of sprouting angiogenesis [GO:1903670]; regulation of store-operated calcium entry [GO:2001256]	hit with GO BP
GN008034	Chromosome_2A	3252	2	87	37.14637146371464	0.7808763620706787	3.519220357336221	87	0	3.11877903118779	45	0	3.7951531778692273	42	0	0.8340283569641368	44	0	unmethylated (<10%)	P51049	Melatonin receptor type 1B-B (Mel-1B-R-B) (Mel1b receptor B) (Melatonin receptor Mel1b Z2.6-4) (zMel1b-1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of insulin secretion [GO:0050796]	hit with GO BP
GN008035	Chromosome_2A	11111	12	311	36.873368733687336	0.8235666618999953	0.5944798301486199	302	0	0.8255933952528379	78	0	0.5346164127238706	224	0	0.5095541401273885	51	0	unmethylated (<10%)	Q60997	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Apactin) (CRP-ductin) (Deleted in malignant brain tumors 1 protein) (Glycoprotein 300) (gp300) (Hensin) (Mucin-like glycoprotein) (Muclin) (Vomeroglandin) (p80)	antimicrobial humoral immune response mediated by antimicrobial peptide [GO:0061844]; blastocyst development [GO:0001824]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; induction of bacterial agglutination [GO:0043152]; inner cell mass cell proliferation [GO:0001833]; positive regulation of epithelial cell differentiation [GO:0030858]; receptor-mediated endocytosis [GO:0006898]; response to bacterium [GO:0009617]	hit with GO BP
GN008036	Chromosome_2A	1087	2	34	40.29438822447102	0.7716140885650459	0.4716981132075472	34	0	0.4716981132075472	34	0	NA	NA	NA	0.519376747902517	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008037	Chromosome_2A	1209	1	36	40.77750206782465	0.7165388034638306	0.674432863274065	36	0	0.674432863274065	36	0	NA	NA	NA	0.4604051565377532	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008038	Chromosome_2A	1206	1	36	40.54726368159204	0.7266276150627615	0.6274509803921569	36	0	0.6274509803921569	36	0	NA	NA	NA	0.6925207756232687	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008039	Chromosome_2A	5067	8	149	36.17525162818236	0.9010397397308993	0.708128078817734	148	0	0.8764940239043825	76	0	0.6021073758153538	72	0	0.5612244897959183	57	0	unmethylated (<10%)	Q02153	Guanylate cyclase soluble subunit beta-1 (GCS-beta-1) (EC 4.6.1.2) (Guanylate cyclase soluble subunit beta-3) (GCS-beta-3) (Soluble guanylate cyclase small subunit)	cellular response to nitric oxide [GO:0071732]; cGMP biosynthetic process [GO:0006182]; nitric oxide-cGMP-mediated signaling [GO:0038060]; response to oxygen levels [GO:0070482]	hit with GO BP
GN008040	Chromosome_2A	4180	2	113	39.16267942583732	0.7086659064994298	1.11612443600095	113	0	0.24390243902439024	17	0	1.3270421704511943	96	0	0.3009458297506449	38	0	unmethylated (<10%)	Q9WVI4	Guanylate cyclase soluble subunit alpha-2 (GCS-alpha-2) (EC 4.6.1.2)	intracellular signal transduction [GO:0035556]; response to oxygen levels [GO:0070482]	hit with GO BP
GN008041	Chromosome_2A	30031	19	359	37.4213312909993	0.3420430649940672	67.54166412306941	357	0.7282913165266106	86.59622641509434	197	0.9543147208121827	54.60229602296023	160	0.45	0.5410566518141311	68	0	methylated (>=50%)	Q24292	Protein dachsous (Adherin)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc morphogenesis [GO:0007560]; negative regulation of hippo signaling [GO:0035331]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]	hit with GO BP
GN008042	Chromosome_2A	12970	8	447	39.79953739398612	0.870631760243674	1.5595162316995543	423	0	0.303951367781155	81	0	1.812203700871693	342	0	0.45643153526970953	45	0	unmethylated (<10%)	F4KD71	Urea-proton symporter DUR3 (AtDUR3) (High-affinity urea active transporter DUR3)	cellular response to nitrogen starvation [GO:0006995]; urea transmembrane transport [GO:0071918]	hit with GO BP
GN008043	Chromosome_2A	996	1	12	41.666666666666664	0.2784456248252726	51.52542372881356	12	0.5833333333333334	51.52542372881356	12	0.5833333333333334	NA	NA	NA	32.6241134751773	42	0.40476190476190477	methylated (>=50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN008044	Chromosome_2A	1324	2	7	37.61329305135952	0.1512599556077817	57.19298245614035	7	0.7142857142857143	57.19298245614035	7	0.7142857142857143	NA	NA	NA	58.2036775106082	35	0.7428571428571429	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008045	Chromosome_2A	17806	10	145	36.36976300123554	0.2478136447380861	80.54852320675106	145	0.903448275862069	53.22376738305942	17	0.5882352941176471	83.0360225572563	128	0.9453125	4.758364312267658	41	0	methylated (>=50%)	Q9NVA4	Transmembrane protein 184C (Transmembrane protein 34)	NA	hit, no GO BP
GN008046	Chromosome_2A	8096	7	68	36.487154150197625	0.252959893766843	86.82692307692308	66	0.9393939393939394	88.28193832599119	23	0.9565217391304348	85.99496221662469	43	0.9302325581395349	84.40736478711162	30	0.9666666666666667	methylated (>=50%)	A0JNJ3	Spartin	cell division [GO:0051301]; lipid transport [GO:0006869]; lipophagy [GO:0061724]; negative regulation of BMP signaling pathway [GO:0030514]	hit with GO BP
GN008047	Chromosome_2A	27921	19	350	37.66698900469181	0.356458146848785	65.46266233766234	292	0.7808219178082192	83.45286885245902	182	0.978021978021978	49.164603960396036	110	0.45454545454545453	21.99546485260771	7	0	methylated (>=50%)	P33450	Cadherin-related tumor suppressor (Protein fat) [Cleaved into: Ft-mito]	axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; equator specification [GO:0045317]; establishment of body hair planar orientation [GO:0048105]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; establishment of tissue polarity [GO:0007164]; establishment or maintenance of polarity of larval imaginal disc epithelium [GO:0016336]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc growth [GO:0007446]; imaginal disc pattern formation [GO:0007447]; imaginal disc-derived wing morphogenesis [GO:0007476]; microtubule cytoskeleton organization involved in establishment of planar polarity [GO:0090176]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of growth [GO:0045926]; negative regulation of imaginal disc growth [GO:0045571]; negative regulation of organ growth [GO:0046621]; positive regulation of apoptotic process [GO:0043065]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]; pupal development [GO:0035209]; regulation of establishment of planar polarity [GO:0090175]; regulation of growth [GO:0040008]; regulation of imaginal disc growth [GO:0045570]; regulation of protein localization [GO:0032880]; regulation of tube length, open tracheal system [GO:0035159]; tissue development [GO:0009888]; wing disc development [GO:0035220]	hit with GO BP
GN008048	Chromosome_2A	5175	1	83	41.23671497584541	0.3773837712458211	76.45990922844176	83	0.9036144578313253	76.45990922844176	83	0.9036144578313253	NA	NA	NA	6.414613423959218	39	0	methylated (>=50%)	Q2PZL6	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)	axonogenesis [GO:0007409]; branching involved in ureteric bud morphogenesis [GO:0001658]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebral cortex development [GO:0021987]; condensed mesenchymal cell proliferation [GO:0072137]; digestive tract development [GO:0048565]; epithelial cell differentiation [GO:0030855]; establishment of planar polarity [GO:0001736]; fibroblast growth factor receptor signaling pathway [GO:0008543]; heart morphogenesis [GO:0003007]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; inner ear receptor cell stereocilium organization [GO:0060122]; kidney development [GO:0001822]; nephron development [GO:0072006]; neurogenesis [GO:0022008]; Notch signaling pathway [GO:0007219]; ossification involved in bone maturation [GO:0043931]; plasma membrane organization [GO:0007009]; regulation of metanephric nephron tubule epithelial cell differentiation [GO:0072307]	hit with GO BP
GN008049	Chromosome_2A	3270	6	109	38.042813455657495	0.9212862803483224	0.5885934645829105	109	0	0.7074490220557637	63	0	0.4754358161648177	46	0	0.8067344791301297	59	0	unmethylated (<10%)	Q99715	Collagen alpha-1(XII) chain	collagen fibril organization [GO:0030199]; endodermal cell differentiation [GO:0035987]	hit with GO BP
GN008050	Chromosome_2A	16474	17	455	35.9172028651208	0.8567280918376141	0.81977143318660906	454	0	0.6586169045005489	60	0	0.8475780103224585	394	0	1.2171684817424728	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008051	Chromosome_2A	618	1	11	41.74757281553398	0.42722473604826544	93.54838709677419	11	1	93.54838709677419	11	1	NA	NA	NA	82.95589988081049	9	1	methylated (>=50%)	Q9R0M6	Ras-related protein Rab-9A (EC 3.6.5.2) (Sid 99)	positive regulation of exocytosis [GO:0045921]; Rab protein signal transduction [GO:0032482]; receptor-mediated endocytosis [GO:0006898]; regulation of protein localization [GO:0032880]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN008052	Chromosome_2A	1343	2	17	39.68726731198809	0.32187165172277676	82.52080856123662	17	1	83.14238952536824	13	1	80.8695652173913	4	1	80.34979423868313	14	1	methylated (>=50%)	P79942	Nocturnin (EC 3.1.3.-) (Carbon catabolite repression 4-like protein) (Rhythmic message 1) (RM1)	circadian rhythm [GO:0007623]; mRNA catabolic process [GO:0006402]; NADP+ metabolic process [GO:0006739]	hit with GO BP
GN008053	Chromosome_2A	9374	13	123	34.56368679325795	0.4394357243473648	84.67665240133144	123	0.9512195121951219	84.15446071904128	27	0.9629629629629629	84.79015918958032	96	0.9479166666666666	21.63992869875223	32	0.21875	methylated (>=50%)	Q96M89	Coiled-coil domain-containing protein 138	NA	hit, no GO BP
GN008054	Chromosome_2A	15757	8	117	35.76822999301898	0.2322062483625884	73.4498971495739	113	0.911504424778761	67.42857142857143	13	0.8461538461538461	74.33822289664475	100	0.92	81.12756808408982	33	1	methylated (>=50%)	E1BNQ4	ATP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.93) (ATP-dependent NAD(P)HX dehydratase) (Carbohydrate kinase domain-containing protein) (NAD(P)HX dehydratase)	metabolite repair [GO:0110051]; nicotinamide nucleotide metabolic process [GO:0046496]	hit with GO BP
GN008055	Chromosome_2A	7562	4	115	37.55620206294631	0.43128386336866903	67.1470207253886	115	0.8260869565217391	81.36896046852122	67	0.9701492537313433	55.86527293844367	48	0.625	35.25	5	0	methylated (>=50%)	Q9BZA7	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome) (PCDH-X) (Protocadherin-S)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008056	Chromosome_2A	6177	3	93	39.06427068156063	0.39473716759431043	64.56131078224101	93	0.7634408602150538	78.78787878787878	67	0.9701492537313433	39.63636363636363	26	0.23076923076923078	55.30596436870643	22	0.5909090909090909	methylated (>=50%)	Q6KEQ9	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome) (PCDH-X)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008057	Chromosome_2A	225	1	7	44.888888888888886	0.6191037735849056	1.7241379310344827	7	0	1.7241379310344827	7	0	NA	NA	NA	1.1183597390493942	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008058	Chromosome_2A	6854	4	64	38.53224394514152	0.25283087163064893	86.40089418777943	59	0.864406779661017	91.19390347163421	30	1	82.63473053892216	29	0.7241379310344828	92.16589861751152	26	1	methylated (>=50%)	Q8CBH5	Major facilitator superfamily domain-containing protein 6 (Macrophage MHC class I receptor 2)	antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]	hit with GO BP
GN008059	Chromosome_2A	5860	4	113	34.436860068259385	0.6519573093887838	82.21001221001221	113	0.8849557522123894	39.335180055401665	8	0.375	84.18699706220463	105	0.9238095238095239	39.14799853103195	49	0.4489795918367347	methylated (>=50%)	A5PJA8	Endoplasmic reticulum membrane protein complex subunit 7 (ER membrane protein complex subunit 7)	protein insertion into ER membrane by stop-transfer membrane-anchor sequence [GO:0045050]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN008060	Chromosome_2A	7779	2	307	41.71487337704075	0.9076129711931153	1.4794994884709216	305	0	1.5966112740306289	247	0	1.1714285714285715	58	0	0.6419939577039275	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008061	Chromosome_2A	1125	2	49	44.62222222222222	0.8754863813229572	2.620545073375262	48	0	2.9797377830750893	42	0	0	6	0	0.9803921568627451	35	0	unmethylated (<10%)	B2RXA1	PI-PLC X domain-containing protein 2 (Phospholipase C X-domain containing protein 2) (PLCXD-2)	lipid metabolic process [GO:0006629]	hit with GO BP
GN008062	Chromosome_2A	3320	4	75	35.51204819277108	0.7222541290311353	79.63086502112519	74	0.8108108108108109	45.07462686567164	14	0.35714285714285715	85.68068983538019	60	0.9166666666666666	1.1376248612652609	63	0	methylated (>=50%)	Q01768	Nucleoside diphosphate kinase B (NDP kinase B) (NDPK B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3) (Nucleoside diphosphate kinases 2) (NDPK2) (P18) (nm23-M2)	CTP biosynthetic process [GO:0006241]; dTMP biosynthetic process [GO:0006231]; GTP biosynthetic process [GO:0006183]; integrin-mediated signaling pathway [GO:0007229]; nucleoside triphosphate biosynthetic process [GO:0009142]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of fatty acid biosynthetic process [GO:0042304]; UTP biosynthetic process [GO:0006228]	hit with GO BP
GN008063	Chromosome_2A	315	1	14	50.79365079365079	0.6891701828410689	1.1363636363636365	14	0	1.1363636363636365	14	0	NA	NA	NA	1.9627579265223956	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008064	Chromosome_2A	516	1	29	47.48062015503876	1.0094441446303293	0.5422993492407809	29	0	0.5422993492407809	29	0	NA	NA	NA	0.44194455604660504	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008065	Chromosome_2A	836	2	8	33.97129186602871	0.33368258244773735	0	1	0	0	1	0	NA	NA	NA	0.7407407407407407	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008066	Chromosome_2A	558	1	24	44.2652329749104	0.8780487804878049	0.8653846153846154	24	0	0.8653846153846154	24	0	NA	NA	NA	1.403595173602561	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008067	Chromosome_2A	3942	9	72	37.08777270421106	0.539884956021548	1.0771470160116448	72	0	1.1190233977619533	28	0	1.0603588907014683	44	0	1.7008797653958945	74	0	unmethylated (<10%)	Q9X248	3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase) (Beta-Ketoacyl-acyl carrier protein reductase) (Beta-ketoacyl-ACP reductase)	fatty acid elongation [GO:0030497]	hit with GO BP
GN008068	Chromosome_2A	11363	14	157	37.91252310129367	0.38691437697795794	75.9114819517504	122	0.8688524590163934	88.85686839577329	20	1	72.89803220035778	102	0.8431372549019608	85.82474226804123	15	0.9333333333333333	methylated (>=50%)	Q9D8U8	Sorting nexin-5	endosome membrane tubulation [GO:0097750]; epidermal growth factor catabolic process [GO:0007174]; intracellular protein transport [GO:0006886]; negative regulation of blood pressure [GO:0045776]; pinocytosis [GO:0006907]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of insulin receptor signaling pathway [GO:0046628]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN008069	Chromosome_2A	9690	5	141	36.85242518059856	0.42863946209949855	86.22384273937857	111	0.9459459459459459	78.72696817420436	35	0.8571428571428571	87.97418850215095	76	0.9868421052631579	3.9288361749444034	57	0	methylated (>=50%)	Q5ZMD4	Tripartite motif-containing protein 59	innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]	hit with GO BP
GN008070	Chromosome_2A	21389	8	222	34.5130674645846	0.3491111130717109	70.76830732292918	191	0.8638743455497382	77.65853658536585	19	0.8421052631578947	70.10435273103319	172	0.8662790697674418	7.013469577333953	49	0.02040816326530612	methylated (>=50%)	Q6F6U3	Nicotinamidase (EC 3.5.1.19) (Nicotinamide deamidase) (NAMase)	NA	hit, no GO BP
GN012686	Chromosome_2A	1249	1	22	39.631705364291435	0.45746345686411616	64.69849246231156	22	0.9090909090909091	64.69849246231156	22	0.9090909090909091	NA	NA	NA	69.5991671004685	22	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008071	Chromosome_2A	818	2	5	37.89731051344743	0.17023933402705516	89.51965065502183	5	1	NA	NA	NA	89.51965065502183	5	1	85.69326958440602	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008072	Chromosome_2A	357	1	6	48.739495798319325	0.3063063063063063	98.57142857142857	6	1	98.57142857142857	6	1	NA	NA	NA	31.33514986376022	18	0.16666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008073	Chromosome_2A	43955	9	479	34.25776362188602	0.37174947672961733	53.40231441188796	478	0.5376569037656904	74.33004231311706	36	0.9166666666666666	52.399932443843944	442	0.5067873303167421	20.419254658385093	19	0.15789473684210525	methylated (>=50%)	P20105	Ecdysone-induced protein 74EF isoform A (ETS-related protein E74A)	autophagic cell death [GO:0048102]; autophagy [GO:0006914]; oogenesis [GO:0048477]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of development, heterochronic [GO:0040034]	hit with GO BP
GN008074	Chromosome_2A	462	1	9	40.476190476190474	0.47596153846153844	1.2406947890818858	9	0	1.2406947890818858	9	0	NA	NA	NA	2.1119678176332553	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008075	Chromosome_2A	351	1	8	46.72364672364672	0.48214285714285715	0	5	0	0	5	0	NA	NA	NA	0.4728992360858494	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008076	Chromosome_2A	11983	12	137	35.55036301427022	0.36222874011587025	80.55522172815768	125	0.928	80.6282722513089	18	0.9444444444444444	80.5457507466739	107	0.9252336448598131	87.85158587672052	25	1	methylated (>=50%)	Q8BGV0	Asparaginyl-tRNA synthetase (AsnRS) (NARS2) (EC 6.1.1.22) (Asparagine--tRNA ligase, mitochondrial)	asparaginyl-tRNA aminoacylation [GO:0006421]	hit with GO BP
GN008077	Chromosome_2A	228	1	6	50.87719298245614	0.40860215053763443	97.33333333333333	6	1	97.33333333333333	6	1	NA	NA	NA	17.2	36	0.16666666666666666	methylated (>=50%)	Q8R034	Anaphase-promoting complex subunit 13 (APC13) (Cyclosome subunit 13)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; protein branched polyubiquitination [GO:0141198]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN008078	Chromosome_2A	5108	7	47	35.317149569303055	0.2953040607444965	59.63302752293578	47	0.6808510638297872	48.84615384615385	19	0.5789473684210527	64.5049218297626	28	0.75	33.65508365508366	35	0.42857142857142855	methylated (>=50%)	Q3T094	Persulfide dioxygenase ETHE1, mitochondrial (EC 1.13.11.18) (Sulfur dioxygenase ETHE1)	glutathione metabolic process [GO:0006749]; hydrogen sulfide metabolic process [GO:0070813]; sulfide oxidation [GO:0019418]	hit with GO BP
GN008079	Chromosome_2A	7376	6	121	34.05639913232104	0.5662991786245689	77.1668118466899	120	0.85	71.20075046904316	15	0.7333333333333333	77.95023404779502	105	0.8666666666666667	9.422657952069716	25	0.16	methylated (>=50%)	Q8BGJ9	Splicing factor U2AF 26 kDa subunit (U2 auxiliary factor 26) (U2 small nuclear RNA auxiliary factor 1-like protein 4) (U2AF1-like 4)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN008080	Chromosome_2A	9805	17	328	37.766445690973995	0.9383607368607789	0.7884097035040432	323	0	0.891492613346918	105	0	0.7513285688107019	218	0	1.335559265442404	44	0	unmethylated (<10%)	Q96M20	Cyclic nucleotide-binding domain-containing protein 2	spermatogenesis [GO:0007283]	hit with GO BP
GN008081	Chromosome_2A	14033	10	140	35.573291527114655	0.31554853344345135	64.48950719170007	140	0.6642857142857143	75.94108019639934	37	0.918918918918919	62.56198347107438	103	0.5728155339805825	37.34643734643735	21	0.19047619047619047	methylated (>=50%)	Q14AW5	Protein NSUN7 (NOL1/NOP2/Sun domain family member 7)	flagellated sperm motility [GO:0030317]; sperm flagellum assembly [GO:0120316]; sperm mitochondrion organization [GO:0030382]	hit with GO BP
GN008082	Chromosome_2A	1730	2	70	39.53757225433526	1.0353967168262654	0.6958942240779401	70	0	0.8241758241758241	45	0	0.5641748942172073	25	0	0.426049908703591	51	0	unmethylated (<10%)	Q63931	Cholecystokinin receptor type A (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R)	NA	hit, no GO BP
GN008083	Chromosome_2A	1565	2	98	63.13099041533546	0.6298381566033009	76.98630136986301	31	0.967741935483871	77.6470588235294	29	0.9655172413793104	68	2	1	67.02269692923899	54	0.9074074074074074	methylated (>=50%)	O74508	Set1 complex component spp1 (Set1C component spp1) (COMPASS component spp1) (Complex proteins associated with set1 protein spp1)	positive regulation of DNA-templated transcription [GO:0045893]; subtelomeric heterochromatin formation [GO:0031509]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN008084	Chromosome_2A	17915	5	164	37.86212670946134	0.2597354606806734	80.26247625625972	163	0.8773006134969326	57.391304347826086	5	0.8	80.96467028566343	158	0.879746835443038	73.49019607843137	18	0.8333333333333334	methylated (>=50%)	Q4SQJ2	Complex III assembly factor LYRM7 (LYR motif-containing protein 7)	mitochondrial respiratory chain complex III assembly [GO:0034551]	hit with GO BP
GN008085	Chromosome_2A	439	2	13	38.724373576309794	0.8189123260152102	0.3225806451612903	3	0	0.3225806451612903	3	0	NA	NA	NA	0.8543357539513029	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008086	Chromosome_2A	1119	2	19	37.622877569258264	0.4801490514905149	6.83474492810715	19	0	7.608946276227807	16	0	2.2972972972972974	3	0	0.6958250497017893	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008087	Chromosome_2A	306	1	2	38.888888888888886	0.1795774647887324	17.56756756756757	2	0	17.56756756756757	2	0	NA	NA	NA	23.052464228934817	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008088	Chromosome_2A	18011	15	200	35.8614180223197	0.3461620809624501	89.66660352339458	196	0.9846938775510204	93.28205128205128	54	0.9814814814814815	88.84758364312268	142	0.9859154929577465	87.18388341191599	31	0.967741935483871	methylated (>=50%)	D3Z902	F-box/WD repeat-containing protein 7	cellular response to UV [GO:0034644]; DNA damage response [GO:0006974]; lung development [GO:0030324]; negative regulation of gene expression [GO:0010629]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of osteoclast development [GO:2001205]; Notch signaling pathway [GO:0007219]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway [GO:1903378]; positive regulation of proteasomal protein catabolic process [GO:1901800]; positive regulation of protein localization to mitochondrion [GO:1903749]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein destabilization [GO:0031648]; protein K63-linked ubiquitination [GO:0070534]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; regulation of cell migration involved in sprouting angiogenesis [GO:0090049]; regulation of circadian rhythm [GO:0042752]; regulation of mitophagy [GO:1901524]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; sister chromatid cohesion [GO:0007062]; ubiquitin recycling [GO:0010992]; vasculogenesis [GO:0001570]	hit with GO BP
GN008089	Chromosome_2A	11165	6	142	35.01119570085088	0.4183227932267502	83.37618781442147	142	0.9014084507042254	92.1259842519685	12	0.9166666666666666	82.5614077966516	130	0.9	0.4747518342684506	41	0	methylated (>=50%)	P52486	Ubiquitin-conjugating enzyme E2-22 kDa (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 4) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)	positive regulation of peptidoglycan recognition protein signaling pathway [GO:0061059]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN019979	Chromosome_2A	2772	3	21	34.99278499278499	0.24748316441058432	84.71615720524018	15	1	77.65042979942693	8	1	92.01183431952663	7	1	83.96946564885496	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016636	Chromosome_2A	2740	3	24	31.277372262773724	0.35840418574231525	62.09322779243624	10	0.9	90	1	1	61.84560780834073	9	0.8888888888888888	0	1	0	methylated (>=50%)	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN008090	Chromosome_2A	703	2	8	38.26458036984353	0.31185538427414883	65.67567567567568	8	1	70.78651685393258	7	1	52.42718446601942	1	1	44.77856752323674	16	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008091	Chromosome_2A	1119	2	16	37.71224307417337	0.4023732470334412	54.9127640036731	16	0.875	64.64891041162228	14	0.9285714285714286	24.334600760456272	2	0.5	80.32786885245902	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008092	Chromosome_2A	1209	1	9	39.04052936311001	0.20533288043478262	NA	0	NA	NA	NA	NA	NA	NA	NA	90.37037037037037	11	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008093	Chromosome_2A	429	1	5	39.39393939393939	0.30827824087381434	92.41706161137441	5	1	92.41706161137441	5	1	NA	NA	NA	88.3177570093458	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008094	Chromosome_2A	1500	1	24	42.46666666666667	0.3596044351213665	41.0337552742616	24	0.4583333333333333	41.0337552742616	24	0.4583333333333333	NA	NA	NA	0.46250412950115627	72	0	sparse (10-50%)	Q9DGG6	Adenylate cyclase type 9 (EC 4.6.1.1) (ATP pyrophosphate-lyase 9) (Adenylate cyclase type IX) (Adenylyl cyclase 9)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cAMP biosynthetic process [GO:0006171]; intracellular signal transduction [GO:0035556]	hit with GO BP
GN008095	Chromosome_2A	23781	7	232	35.21719019385223	0.31474947908691714	80.49583575440636	231	0.9134199134199135	77.1343726800297	29	0.9310344827586207	80.8160090510536	202	0.9108910891089109	77.05530642750374	19	0.9473684210526315	methylated (>=50%)	Q9DGG6	Adenylate cyclase type 9 (EC 4.6.1.1) (ATP pyrophosphate-lyase 9) (Adenylate cyclase type IX) (Adenylyl cyclase 9)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cAMP biosynthetic process [GO:0006171]; intracellular signal transduction [GO:0035556]	hit with GO BP
GN008096	Chromosome_2A	588	1	24	44.38775510204081	0.8289473684210527	0.5825242718446602	22	0	0.5825242718446602	22	0	NA	NA	NA	0.709849157054126	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008097	Chromosome_2A	16907	12	235	35.19843851659076	0.4522265625889225	85.16415988763387	234	0.9316239316239316	87.09876543209876	29	0.896551724137931	84.96153100148703	205	0.9365853658536586	1.1475932419509085	48	0	methylated (>=50%)	P12613	T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (Chaperonin containing TCP1 subunit 1)	follicle cell of egg chamber development [GO:0030707]; protein folding [GO:0006457]	hit with GO BP
GN008098	Chromosome_2A	1638	1	27	37.91208791208791	0.46971982071924717	28.476141611082607	27	0.37037037037037035	28.476141611082607	27	0.37037037037037035	NA	NA	NA	0.7551240560949298	37	0	sparse (10-50%)	P32896	Protein PDC2	positive regulation of glycolytic fermentation to ethanol [GO:2001172]; positive regulation of thiamine biosynthetic process [GO:0090180]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN008099	Chromosome_2A	27092	25	234	34.283183227521036	0.2948736172467582	69.00340451872485	233	0.7811158798283262	81.08399138549892	66	0.9090909090909091	65.68356677845729	167	0.7305389221556886	0.7089804186360568	65	0	methylated (>=50%)	Q6NXJ0	Protein WWC2 (WW domain-containing protein 2)	cell migration [GO:0016477]; hippo signaling [GO:0035329]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of hippo signaling [GO:0035331]; negative regulation of organ growth [GO:0046621]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of DNA-templated transcription [GO:0006355]; regulation of hippo signaling [GO:0035330]	hit with GO BP
GN008100	Chromosome_2A	17821	9	260	33.39318781213176	0.5245790651124456	76.75631032880814	260	0.8615384615384616	44.11177644710579	8	0.375	77.62293344637558	252	0.876984126984127	1.4419852448021462	46	0	methylated (>=50%)	Q5SXM2	snRNA-activating protein complex subunit 4 (SNAPc subunit 4) (Proximal sequence element-binding transcription factor subunit alpha) (PSE-binding factor subunit alpha) (PTF subunit alpha) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit)	snRNA transcription by RNA polymerase II [GO:0042795]; snRNA transcription by RNA polymerase III [GO:0042796]	hit with GO BP
GN008101	Chromosome_2A	312	1	9	41.34615384615385	0.710886075949367	77.35470941883767	9	0.8888888888888888	77.35470941883767	9	0.8888888888888888	NA	NA	NA	83.46273291925466	34	0.8823529411764706	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008102	Chromosome_2A	20326	14	308	35.61448391223064	0.4820565749694653	75.12654223347042	308	0.8961038961038961	93.92568659127625	65	1	72.50484386968864	243	0.8683127572016461	87.45505393527766	31	0.967741935483871	methylated (>=50%)	Q54NA6	Myb-like protein L	snRNA transcription by RNA polymerase II [GO:0042795]; snRNA transcription by RNA polymerase III [GO:0042796]	hit with GO BP
GN008103	Chromosome_2A	9154	8	204	32.892724492025344	0.8239576632171401	0.7698832126313042	203	0	0.5076142131979695	32	0	0.8177119493944303	171	0	4.2164883574575205	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008104	Chromosome_2A	1353	2	13	31.781226903178123	0.38054131239047184	15.157894736842104	13	0	17.48178980228928	9	0	10.344827586206897	4	0	2.0165646380986675	49	0	sparse (10-50%)	Q9H5L6	DNA transposase THAP9 (EC 2.7.7.-) (THAP domain-containing protein 9) (hTh9)	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; DNA transposition [GO:0006313]	hit with GO BP
GN008105	Chromosome_2A	1542	4	49	37.159533073929964	0.9310676261829653	0.5034856700232379	49	0	0.5085823267641449	38	0	0.49554013875123887	11	0	0.47961630695443647	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008106	Chromosome_2A	17621	10	146	35.01503887407071	0.27705187153290206	85.4282158615228	142	0.9859154929577465	83.72781065088758	21	1	85.64856230031948	121	0.9834710743801653	91.88001034393587	55	1	methylated (>=50%)	Q5Q0U0	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Solute carrier family 17 (Anion/sugar transporter), member 5) (Vesicular excitatory amino acid transporter) (VEAT)	neurotransmitter loading into synaptic vesicle [GO:0098700]; response to bacterium [GO:0009617]; sialic acid transport [GO:0015739]	hit with GO BP
GN008107	Chromosome_2A	10269	6	251	34.521375012172555	0.8205768923430155	2.1480964023751308	247	0	0.5528255528255528	63	0	2.412459283387622	184	0	2.4205748865355523	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008108	Chromosome_2A	12990	14	335	36.52809853733641	0.773774405993251	1.0401587046270977	335	0	0.8756567425569177	88	0	1.085027978708885	247	0	1.9238319591676483	47	0	unmethylated (<10%)	P90884	Protein madd-4 (Punctin)	dorsal/ventral axon guidance [GO:0033563]; extracellular matrix organization [GO:0030198]; synapse organization [GO:0050808]	hit with GO BP
GN008109	Chromosome_2A	1974	3	32	39.76697061803445	0.41115363586659376	1.2915129151291513	19	0	1.4134275618374559	9	0	1.2484394506866416	10	0	2.7535890797834783	82	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN008110	Chromosome_2A	14767	6	120	34.23173291799282	0.27781218125612794	63.37898340795365	120	0.8	40.421052631578945	8	0.5	64.91080207894368	112	0.8214285714285714	70.22932022932022	39	0.5897435897435898	methylated (>=50%)	Q96E35	Zinc finger MYND domain-containing protein 19 (Melanin-concentrating hormone receptor 1-interacting zinc finger protein) (MCH-R1-interacting zinc finger protein)	NA	hit, no GO BP
GN008111	Chromosome_2A	2064	2	86	42.92635658914729	0.9063308977834965	0.5949851253718657	86	0	0.6261180679785331	84	0	0	2	0	0.5248284214775939	55	0	unmethylated (<10%)	A4IF63	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN008112	Chromosome_2A	1293	1	52	41.76334106728538	0.9268944981320393	0.4166666666666667	52	0	0.4166666666666667	52	0	NA	NA	NA	0.5522514868309261	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008113	Chromosome_2A	282	1	14	51.773049645390074	0.7458907991687134	4.57280385078219	14	0	4.57280385078219	14	0	NA	NA	NA	3.278688524590164	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008114	Chromosome_2A	703	2	8	38.26458036984353	0.31140642303433	35.4066985645933	8	0.25	35.97560975609756	7	0.2857142857142857	33.333333333333336	1	0	36.54096228868661	14	0.2857142857142857	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008115	Chromosome_2A	4740	5	94	37.21518987341772	0.5864954409575371	71.72995780590718	65	0.8307692307692308	80.72289156626506	11	0.8181818181818182	70.41758241758242	54	0.8333333333333334	23.46723044397463	25	0	methylated (>=50%)	Q2HJ58	Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthase I) (PRS-I)	5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]; ribonucleoside monophosphate biosynthetic process [GO:0009156]	hit with GO BP
GN008116	Chromosome_2A	703	2	8	38.40682788051209	0.30873956960913485	3.5483870967741935	8	0	3.982300884955752	7	0	2.380952380952381	1	0	7.974388824214203	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008117	Chromosome_2A	1086	2	17	36.64825046040516	0.46638878363016295	2.4390243902439024	1	0	NA	NA	NA	2.4390243902439024	1	0	4.830287206266319	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008118	Chromosome_2A	1081	2	17	36.54024051803885	0.4711568044303148	5	2	0	0	1	0	7.407407407407407	1	0	8.333333333333334	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008119	Chromosome_2A	1082	2	17	36.59889094269871	0.469234693877551	0	3	0	NA	NA	NA	0	3	0	1.8784530386740332	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008120	Chromosome_2A	1107	2	17	36.404697380307134	0.4635221674876847	2.1739130434782608	3	0	NA	NA	NA	2.1739130434782608	3	0	2.5316455696202533	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008121	Chromosome_2A	1081	2	19	36.4477335800185	0.52924654710369	0.6557377049180327	18	0	0.5050505050505051	14	0	0.9345794392523364	4	0	6.435643564356436	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008122	Chromosome_2A	454	2	11	43.83259911894273	0.5045463730046474	0.3076923076923077	11	0	0.5025125628140703	7	0	0	4	0	1.8273471959672338	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008123	Chromosome_2A	5514	4	131	35.23757707653246	0.7708958106991844	0.5600722673893406	131	0	0.6211180124223602	19	0	0.5471656817684395	112	0	0.4598405885959534	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008124	Chromosome_2A	1187	4	30	37.236731255265376	0.7370839542970691	1.4899211218229622	28	0	1.3071895424836601	19	0	1.8617021276595744	9	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008125	Chromosome_2A	2790	1	124	39.24731182795699	1.1559202656919283	0.6246016571064372	124	0	0.6246016571064372	124	0	NA	NA	NA	0.8350730688935282	84	0	unmethylated (<10%)	Q6R2W3	SCAN domain-containing protein 3 (Transposon-derived Buster4 transposase-like protein) (Zinc finger BED domain-containing protein 9)	DNA integration [GO:0015074]; positive regulation of cell cycle [GO:0045787]; positive regulation of epithelial cell proliferation [GO:0050679]	hit with GO BP
GN008126	Chromosome_2A	264	1	7	50	0.42424242424242425	0.78125	7	0	0.78125	7	0	NA	NA	NA	1.3444598980064906	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008127	Chromosome_2A	2383	4	74	35.79521611414184	0.971260189469046	0.5423553719008265	74	0	0.4438807863031072	33	0	0.6100217864923747	41	0	0.6743355811186037	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008128	Chromosome_2A	420	1	20	45.714285714285715	0.9375	0	7	0	0	7	0	NA	NA	NA	1	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008129	Chromosome_2A	255	1	6	47.84313725490196	0.4166666666666667	0.8	6	0	0.8	6	0	NA	NA	NA	0.5592841163310962	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008130	Chromosome_2A	606	1	15	41.914191419141915	0.5826923076923077	32.49370277078086	15	0.13333333333333333	32.49370277078086	15	0.13333333333333333	NA	NA	NA	8.462164361269325	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008131	Chromosome_2A	339	1	7	45.42772861356932	0.46122448979591835	0	7	0	0	7	0	NA	NA	NA	0.617630544637844	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008132	Chromosome_2A	8934	9	202	35.16901723751959	0.7317887924480101	1.3491635186184565	201	0	0.5664263645726055	40	0	1.514821272885789	161	0	0.7056451612903226	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008133	Chromosome_2A	1603	3	39	36.93075483468497	0.7147087067861716	0.4784688995215311	39	0	0.6289308176100629	22	0	0.3070624360286592	17	0	1.1587485515643106	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008134	Chromosome_2A	4585	3	154	40.021810250817886	0.8392405484558041	0.8379888268156425	153	0	0.5652911249293386	49	0	0.9719522354901416	104	0	1.8588931136459654	55	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN008135	Chromosome_2A	6376	7	156	34.410288582183185	0.826549131449313	0.5800727934485896	155	0	0.35398230088495575	38	0	0.6340707341130055	117	0	0.4789599726308587	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008136	Chromosome_2A	18880	15	462	35.05826271186441	0.7971575417393296	2.454034054441802	462	0	0.8810572687224669	82	0	2.759989176513033	380	0	0.6139677666922486	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008137	Chromosome_2A	6122	8	204	37.86344331917674	0.9297738191223012	0.9009910901992192	201	0	0.6038086391082211	51	0	0.9826442062276671	150	0	0.45977011494252873	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008138	Chromosome_2A	5888	5	50	33.916440217391305	0.2955983557341462	82.82539682539682	50	0.98	66.8	4	1	84.20689655172414	46	0.9782608695652174	92.25836005497023	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008139	Chromosome_2A	300	1	14	48.333333333333336	0.8	1.7751479289940828	14	0	1.7751479289940828	14	0	NA	NA	NA	1.4301430143014302	92	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008140	Chromosome_2A	1514	4	39	37.31836195508586	0.7421008973682226	0.8501594048884166	39	0	0.7250755287009063	35	0	1.7621145374449338	4	0	0.3645200486026732	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008141	Chromosome_2A	981	3	32	38.63404689092763	0.8759417378201909	0.6605019815059445	32	0	0.5773672055427251	18	0	0.7716049382716049	14	0	0.8656224237427865	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008142	Chromosome_2A	4572	7	113	34.95188101487314	0.8093924339770735	0.6571741511500547	112	0	0.7465618860510805	50	0	0.5980239209568383	62	0	0.36319612590799033	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008143	Chromosome_2A	3865	7	77	33.479948253557566	0.7131457682842375	0.4639175257731959	77	0	0.5534034311012729	33	0	0.3859141341051616	44	0	0.5223880597014925	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008144	Chromosome_2A	5246	7	137	35.34121235226839	0.836543352426225	0.6528562460765851	137	0	0.7416563658838071	41	0	0.6139400505597689	96	0	0.7032967032967034	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008145	Chromosome_2A	5136	8	109	34.32632398753894	0.7219045703188468	0.5941978329255505	108	0	0.6206644760861628	58	0	0.5698960777740529	50	0	0.7153075822603719	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008146	Chromosome_2A	4165	2	133	38.967587034813924	0.8422943700563511	0.8431329043709784	125	0	0.9712230215827338	99	0	0.6369426751592356	26	0	0.8389715832205683	66	0	unmethylated (<10%)	Q9BZA8	Protocadherin-11 Y-linked (Protocadherin-11) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC) (Protocadherin-22)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of Wnt signaling pathway [GO:0030177]; spermatogenesis [GO:0007283]	hit with GO BP
GN008147	Chromosome_2A	2661	1	109	41.18752348741075	0.966894459630642	0.8898776418242491	109	0	0.8898776418242491	109	0	NA	NA	NA	0.7971014492753623	65	0	unmethylated (<10%)	F8W3X3	Protocadherin-19	brain morphogenesis [GO:0048854]; cell adhesion [GO:0007155]; cell-cell adhesion [GO:0098609]; excitatory postsynaptic potential [GO:0060079]; homophilic cell-cell adhesion [GO:0007156]; neural tube formation [GO:0001841]; regulation of neuronal action potential [GO:0098908]; visual perception [GO:0007601]	hit with GO BP
GN008148	Chromosome_2A	6633	4	209	38.308457711442784	0.85909892022131	1.720816745858482	209	0	1.4483065953654188	145	0	2.0915428917853895	64	0	0.6891548784911136	58	0	unmethylated (<10%)	Q80TF3	Protocadherin-19	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008149	Chromosome_2A	8433	4	282	37.946163879995254	0.9302125272685241	0.804055235098759	282	0	0.8500590318772137	149	0	0.7770223393922575	133	0	0.32	40	0	unmethylated (<10%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008150	Chromosome_2A	3459	6	106	37.75657704538884	0.8607547984825151	0.6998444790046656	106	0	0.7633587786259542	64	0	0.618921308576481	42	0	0.47538200339558573	54	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN008151	Chromosome_2A	6184	5	157	37.144243208279434	0.7371071092350208	1.2187195320116997	157	0	1.104158998895841	94	0	1.3092813500145475	63	0	0.5904059040590406	42	0	unmethylated (<10%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008152	Chromosome_2A	7127	5	244	38.17875684018521	0.9396613305350433	1.3873529707449481	243	0	1.1883541295306002	120	0	1.4891353897583954	123	0	0.41695621959694235	40	0	unmethylated (<10%)	Q9BZA8	Protocadherin-11 Y-linked (Protocadherin-11) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC) (Protocadherin-22)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of Wnt signaling pathway [GO:0030177]; spermatogenesis [GO:0007283]	hit with GO BP
GN008153	Chromosome_2A	8299	4	89	36.40197614170382	0.32576246069165055	54.9010989010989	89	0.6067415730337079	66.60698299015219	52	0.8076923076923077	43.60967184801382	37	0.32432432432432434	33.93536121673004	14	0.21428571428571427	methylated (>=50%)	Q6X862	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008154	Chromosome_2A	9322	3	114	36.78395194164342	0.36153908961012454	53.409701091820295	114	0.6140350877192983	72.12148685403446	65	0.8923076923076924	41.200828157349896	49	0.24489795918367346	33.92010832769127	30	0.1	methylated (>=50%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008155	Chromosome_2A	8162	3	273	38.323940210732665	0.9109851706002408	1.1901306240928882	272	0	1.153715643026807	134	0	1.2046561992420142	138	0	0.5062305295950156	45	0	unmethylated (<10%)	Q9HC56	Protocadherin-9	cell adhesion [GO:0007155]; forebrain development [GO:0030900]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008156	Chromosome_2A	8049	4	113	34.575723692384145	0.47068567755797813	68.94960965223562	113	0.8053097345132744	77.57067412239826	83	0.9036144578313253	57.46793545717832	30	0.5333333333333333	36.10894941634241	23	0.34782608695652173	methylated (>=50%)	Q6WYY1	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome) (PCDH-X)	homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008157	Chromosome_2A	16499	7	236	36.8749621189163	0.4277348015317657	82.8080229226361	192	0.9427083333333334	82.71308523409364	15	1	82.81542493448147	177	0.9378531073446328	83.33333333333333	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008158	Chromosome_2A	2237	6	55	38.623156012516766	0.659439903524052	1.3630168105406633	55	0	1.8501387604070305	27	0	0.8928571428571429	28	0	15.839350180505415	33	0.21212121212121213	unmethylated (<10%)	O75592	E3 ubiquitin-protein ligase MYCBP2 (EC 2.3.2.33) (Myc-binding protein 2) (Protein associated with Myc)	axon guidance [GO:0007411]; central nervous system projection neuron axonogenesis [GO:0021952]; circadian regulation of gene expression [GO:0032922]; neuromuscular process [GO:0050905]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of axon guidance [GO:1902667]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; synaptic assembly at neuromuscular junction [GO:0051124]	hit with GO BP
GN008159	Chromosome_2A	65254	71	841	37.28813559322034	0.3727225891268913	87.88332809743602	810	0.9691358024691358	91.67113877857679	214	0.9906542056074766	86.78268463073853	596	0.9614093959731543	91.26478616924477	36	0.9444444444444444	methylated (>=50%)	O75592	E3 ubiquitin-protein ligase MYCBP2 (EC 2.3.2.33) (Myc-binding protein 2) (Protein associated with Myc)	axon guidance [GO:0007411]; central nervous system projection neuron axonogenesis [GO:0021952]; circadian regulation of gene expression [GO:0032922]; neuromuscular process [GO:0050905]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of axon guidance [GO:1902667]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; synaptic assembly at neuromuscular junction [GO:0051124]	hit with GO BP
GN008160	Chromosome_2A	3367	2	94	35.046035046035044	0.9095318970397639	0.6756756756756757	94	0	0.2635046113306983	23	0	0.7488883688275216	71	0	1.3063840276066059	77	0	unmethylated (<10%)	A2VDD2	Dynein light chain Tctex-type 5-B (Tctex1 domain-containing protein 1-B)	microtubule-based movement [GO:0007018]	hit with GO BP
GN008161	Chromosome_2A	1149	1	21	45.60487380330722	0.35989797744764634	79.18410041841004	20	0.95	79.18410041841004	20	0.95	NA	NA	NA	59.57597173144876	8	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008162	Chromosome_2A	387	1	9	52.713178294573645	0.3403028822667318	88.51744186046511	9	1	88.51744186046511	9	1	NA	NA	NA	90.7842014882656	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008163	Chromosome_2A	4301	7	53	34.66635666124157	0.4123607091172214	91.67123287671232	53	0.9811320754716981	91.71741778319122	13	1	91.65782962177448	40	0.975	84.99168053244593	50	1	methylated (>=50%)	Q3B736	Autophagy-related protein 101	autophagosome assembly [GO:0000045]	hit with GO BP
GN008164	Chromosome_2A	2474	4	68	42.64349232012935	0.6140615988845332	1.0471204188481675	23	0	1.243781094527363	15	0	0.5847953216374269	8	0	16.643550624133148	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008165	Chromosome_2A	2482	2	90	44.03706688154714	0.7505897058527046	NA	0	NA	NA	NA	NA	NA	NA	NA	0.16750418760469013	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008166	Chromosome_2A	726	1	28	40.49586776859504	0.9408933117333951	0.7142857142857143	28	0	0.7142857142857143	28	0	NA	NA	NA	0.2960039467192896	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008167	Chromosome_2A	1623	3	31	34.99691928527418	0.6249130564387917	2.2995649471721564	31	0	1.5364916773367479	18	0	3.0193236714975846	13	0	0.5141388174807198	48	0	unmethylated (<10%)	Q4R5Y0	Cilia- and flagella-associated protein 68	flagellated sperm motility [GO:0030317]	hit with GO BP
GN008168	Chromosome_2A	2034	1	33	36.332350049164205	0.4964718412994275	0.2518891687657431	26	0	0.2518891687657431	26	0	NA	NA	NA	0.5500550055005501	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008169	Chromosome_2A	4105	6	123	37.198538367844094	0.8665212496481847	0.7450176941702366	123	0	0.3597122302158273	33	0	0.8796179944709726	90	0	0.3715170278637771	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008170	Chromosome_2A	4322	4	111	37.57519666820916	0.7280036055558338	0.7410084944876197	111	0	0.42598509052183176	22	0	0.805398345668263	89	0	0.6488824801730353	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008171	Chromosome_2A	8829	2	246	37.10499490316004	0.8108200731104183	0.6401384083044983	246	0	0.8684863523573201	24	0	0.623023991073089	222	0	1.6684045881126173	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008172	Chromosome_2A	46148	26	547	34.424027043425504	0.4005755297959018	68.65606621651057	542	0.7933579335793358	82.93233082706767	40	1	67.54138781261007	502	0.7768924302788844	57.46054519368723	22	0.6818181818181818	methylated (>=50%)	P22411	Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (CD antigen CD26) [Cleaved into: Dipeptidyl peptidase 4 membrane form (Dipeptidyl peptidase IV membrane form); Dipeptidyl peptidase 4 soluble form (Dipeptidyl peptidase IV soluble form)]	endothelial cell migration [GO:0043542]; negative regulation of extracellular matrix disassembly [GO:0010716]; negative regulation of neutrophil chemotaxis [GO:0090024]; positive regulation of cell population proliferation [GO:0008284]; proteolysis [GO:0006508]; regulation of cell-cell adhesion mediated by integrin [GO:0033632]; response to hypoxia [GO:0001666]; T cell activation [GO:0042110]; T cell costimulation [GO:0031295]	hit with GO BP
GN008173	Chromosome_2A	2607	2	53	42.079018028385114	0.46675922735472364	1.968503937007874	14	0	2.0661157024793386	13	0	0	1	0	0.8689081979599547	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008174	Chromosome_2A	339	1	7	43.657817109144545	0.4334246575342466	0	4	0	0	4	0	NA	NA	NA	0.6233956729006234	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008175	Chromosome_2A	333	1	2	42.94294294294294	0.13314674130347862	77.08333333333333	2	1	77.08333333333333	2	1	NA	NA	NA	93.24473975636766	32	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008176	Chromosome_2A	5798	3	49	35.6157295619179	0.2679691832892538	68.6388384754991	49	0.8775510204081632	82.3262839879154	29	1	55.9748427672956	20	0.7	69.94359387590653	25	0.92	methylated (>=50%)	Q6KEQ9	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome) (PCDH-X)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008177	Chromosome_2A	1176	1	8	37.074829931972786	0.19802980550644103	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9685230024213075	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008178	Chromosome_2A	1023	1	23	40.37145650048876	0.5549030706098769	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008179	Chromosome_2A	1376	4	32	41.56976744186046	0.5389737563650607	0.7415254237288136	32	0	0.7415254237288136	32	0	NA	NA	NA	0.7260726072607261	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008180	Chromosome_2A	7294	4	107	37.18124485878805	0.4244535376476014	72.34042553191489	107	0.897196261682243	78.6752281176073	72	0.9583333333333334	64.37074829931973	35	0.7714285714285715	58.81024096385542	19	0.8421052631578947	methylated (>=50%)	Q6X862	Protocadherin-11 X-linked (Protocadherin-11) (Protocadherin on the X chromosome)	cell adhesion [GO:0007155]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008181	Chromosome_2A	246	1	8	55.6910569105691	0.4245038826574633	82.92682926829268	8	1	82.92682926829268	8	1	NA	NA	NA	47.6657060518732	49	0.4897959183673469	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008182	Chromosome_2A	1722	1	82	42.68292682926829	1.0532581453634084	0.5796113194681214	82	0	0.5796113194681214	82	0	NA	NA	NA	5.271897052718971	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008183	Chromosome_2A	9133	3	204	33.77860505857878	0.7836240486140553	3.0675866655582342	202	0	2.45520902455209	41	0	3.155293670404866	161	0	0.6134969325153374	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008184	Chromosome_2A	2217	3	47	34.37077131258457	0.717940414507772	1.5352697095435686	47	0	1.1363636363636365	14	0	1.6722408026755853	33	0	1.1182108626198084	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008185	Chromosome_2A	1637	2	31	38.97373243738546	0.5001084042888678	0.4655493482309125	31	0	0.3712871287128713	20	0	0.7518796992481203	11	0	1.77153329260843	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008186	Chromosome_2A	318	1	7	42.138364779874216	0.4959893048128342	1.675977653631285	7	0	1.675977653631285	7	0	NA	NA	NA	0.3125	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008187	Chromosome_2A	998	2	17	37.17434869739479	0.49529981899924097	0.20618556701030927	17	0	0.2617801047120419	14	0	0	3	0	0.59194948697711125	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008188	Chromosome_2A	6441	11	169	33.876727216270766	0.9180808614970434	0.8088589311506981	169	0	1.1637931034482758	75	0	0.5221932114882507	94	0	72.71922054915855	43	0.8372093023255814	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008189	Chromosome_2A	1024	2	48	45.3125	0.9133512961070334	96.3529411764706	36	1	96.63341645885286	33	1	91.66666666666667	3	1	1.2873563218390804	34	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008190	Chromosome_2A	1034	3	31	38.007736943907155	0.8317073170731707	1.477832512315271	31	0	1.7156862745098038	7	0	1.3580246913580247	24	0	1.0309278350515463	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008191	Chromosome_2A	5199	8	114	37.83419888440085	0.6139406244173279	1.226396729608721	113	0	0.8656036446469249	36	0	1.495581237253569	77	0	5.894006934125805	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008192	Chromosome_2A	389	3	4	33.419023136246786	0.3726053639846743	78.96440129449839	4	1	81.09243697478992	3	1	71.83098591549296	1	1	69.70317297850563	31	0.8387096774193549	NA	NA	NA	NA	no Swiss-Prot hit
GN008193	Chromosome_2A	8609	5	250	36.68254152630968	0.865185784301114	0.9777637596593597	250	0	0.7692307692307693	59	0	1.028202115158637	191	0	0.5654632448890822	49	0	unmethylated (<10%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN008194	Chromosome_2A	372	1	17	44.354838709677416	0.9475576865448008	0.6837606837606838	17	0	0.6837606837606838	17	0	NA	NA	NA	0.4707728520988623	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008195	Chromosome_2A	9753	3	136	32.84117707372091	0.5175055011938762	82.67187813189015	133	0.9022556390977443	78.17745803357315	18	0.8888888888888888	83.08180227471566	115	0.9043478260869565	0.6866642573183954	54	0	methylated (>=50%)	Q924T2	Small ribosomal subunit protein uS2m (28S ribosomal protein S2, mitochondrial) (MRP-S2) (S2mt)	mitochondrial ribosome assembly [GO:0061668]; mitochondrial translation [GO:0032543]	hit with GO BP
GN008196	Chromosome_2A	3774	4	94	33.889772125066244	0.8675225588731568	0.5215523853351741	91	0	0.6552006552006552	47	0	0.44150110375275936	44	0	0.3897116134060795	40	0	unmethylated (<10%)	Q5DWN0	Zinc finger protein Gfi-1 (Growth factor independence 1)	cellular response to lipopolysaccharide [GO:0071222]; DNA damage response [GO:0006974]; negative regulation of neuron projection development [GO:0010977]; positive regulation of interleukin-6-mediated signaling pathway [GO:0070105]; regulation of toll-like receptor signaling pathway [GO:0034121]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008197	Chromosome_2A	2236	2	86	39.08765652951699	1.018732782369146	0.6314270250766733	86	0	0.15527950310559005	13	0	0.6940191875893039	73	0	0.6265157639450283	65	0	unmethylated (<10%)	B2RUY7	von Willebrand factor C domain-containing protein 2-like (VWC2-like protein) (Brorin-like)	negative regulation of BMP signaling pathway [GO:0030514]	hit with GO BP
GN008198	Chromosome_2A	261	1	2	42.52873563218391	0.17014341590612778	0	2	0	0	2	0	NA	NA	NA	0.8153281695882593	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008199	Chromosome_2A	2839	5	78	36.49172243747798	0.8256507197906063	0.5383580080753702	78	0	0.37593984962406013	44	0	0.6606890042472865	34	0	0.497787610619469	57	0	unmethylated (<10%)	F1R8P4	Glycine receptor subunit alpha-2	chloride transmembrane transport [GO:1902476]	hit with GO BP
GN008200	Chromosome_2A	4019	4	112	35.75516297586464	0.87193553386022	0.6803849983405243	112	0	0.7485029940119761	31	0	0.6609808102345416	81	0	0.5904828065300451	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008201	Chromosome_2A	19204	10	389	35.72693188918975	0.6350762327202887	49.45059934616782	336	0.47023809523809523	72.30419977298524	19	0.7368421052631579	48.49832095729083	317	0.45425867507886436	5.528052805280528	43	0.046511627906976744	sparse (10-50%)	Q90640	Chromosome-associated kinesin KIF4 (Chromokinesin)	microtubule-based movement [GO:0007018]; mitotic spindle organization [GO:0007052]; spindle elongation [GO:0051231]	hit with GO BP
GN008202	Chromosome_2A	14365	10	130	31.869126348764357	0.37087775958811703	64.98369210697977	126	0.7063492063492064	67.31674512441157	21	0.7142857142857143	64.42214308837812	105	0.7047619047619048	0.6766696087084436	51	0	methylated (>=50%)	Q28DG7	Ubiquitin-associated domain-containing protein 1 (UBA domain-containing protein 1) (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2)	protein maturation [GO:0051604]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008203	Chromosome_2A	576	1	28	46.354166666666664	0.9078014184397163	0.8579599618684461	28	0	0.8579599618684461	28	0	NA	NA	NA	5.098312162867583	98	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008204	Chromosome_2A	192	1	12	44.270833333333336	1.3963636363636365	NA	0	NA	NA	NA	NA	NA	NA	NA	0.25220680958385877	66	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008205	Chromosome_2A	192	1	12	44.270833333333336	1.3963636363636365	0	2	0	0	2	0	NA	NA	NA	0.2852485737571312	62	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008206	Chromosome_2A	8498	5	74	31.077900682513533	0.37022567298023507	2.5056215868936715	71	0	1.8140589569160999	23	0	2.7790228597041686	48	0	0.2557544757033248	65	0	unmethylated (<10%)	A2RSX4	Protein STPG3 (Sperm-tail PG-rich repeat-containing protein 3)	NA	hit, no GO BP
GN008207	Chromosome_2A	312	1	12	42.62820512820513	0.8478260869565217	NA	0	NA	NA	NA	NA	NA	NA	NA	0	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008208	Chromosome_2A	39710	14	919	35.38655250566608	0.7393567077238166	0.9809782608695652	847	0.0035419126328217238	0.6669842782277274	56	0	0.9999711823866747	791	0.0037926675094816687	0.5636070853462157	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008209	Chromosome_2A	369	1	26	60.704607046070464	0.7663551401869159	NA	0	NA	NA	NA	NA	NA	NA	NA	5.988315481986368	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008210	Chromosome_2A	195	1	13	57.43589743589744	0.817741935483871	2.272727272727273	11	0	2.272727272727273	11	0	NA	NA	NA	7.071887784921099	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008211	Chromosome_2A	16360	5	259	34.60268948655257	0.529004456769288	69.7589199614272	185	0.6810810810810811	51.7219787100814	38	0.5	73.04228884076143	147	0.7278911564625851	0.8542445274959958	41	0	methylated (>=50%)	O94760	N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 (DDAH-1) (Dimethylarginine dimethylaminohydrolase 1) (EC 3.5.3.18) (DDAHI) (Dimethylargininase-1)	arginine metabolic process [GO:0006525]; L-arginine catabolic process [GO:0006527]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cellular response to hypoxia [GO:1900038]; negative regulation of vascular permeability [GO:0043116]; nitric oxide metabolic process [GO:0046209]; positive regulation of angiogenesis [GO:0045766]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; regulation of systemic arterial blood pressure [GO:0003073]	hit with GO BP
GN008212	Chromosome_2A	495	1	17	43.83838383838384	0.7244318181818182	0.4484304932735426	17	0	0.4484304932735426	17	0	NA	NA	NA	0.8932196508323184	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008213	Chromosome_2A	540	1	24	46.48148148148148	0.8234845596645063	0.8156606851549756	24	0	0.8156606851549756	24	0	NA	NA	NA	0.4700352526439483	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008214	Chromosome_2A	7910	9	207	36.447534766118835	0.7886067499501512	0.8644133644133644	204	0	0.5826983415508741	50	0	0.9423434593924365	154	0	0.5403458213256485	50	0	unmethylated (<10%)	Q5TZ24	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)	NA	hit, no GO BP
GN008215	Chromosome_2A	5947	7	170	36.152682024550195	0.8753948407475651	1.1561444531047025	170	0	0.9408602150537635	34	0	1.2077294685990339	136	0	5.949519230769231	30	0	unmethylated (<10%)	Q9CXI3	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)	NA	hit, no GO BP
GN008216	Chromosome_2A	27669	21	786	36.14153023239004	0.8701305793978409	0.8470297862792393	786	0	0.6590424500872262	126	0	0.8788325955074603	660	0	4.7695390781563125	63	0	unmethylated (<10%)	Q5TZ24	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)	NA	hit, no GO BP
GN008217	Chromosome_2A	15428	20	414	35.83743842364532	0.835752104561261	1.0141590318945666	412	0	0.4756756756756757	107	0	1.1719244900544787	305	0	2.677165354330709	83	0	unmethylated (<10%)	Q5TZ24	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)	NA	hit, no GO BP
GN008218	Chromosome_2A	821	3	30	38.73325213154689	0.974403608023104	0.2699055330634278	30	0	0.1669449081803005	24	0	0.704225352112676	6	0	0.9209888511875909	47	0	unmethylated (<10%)	Q98ST7	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)	NA	hit, no GO BP
GN008219	Chromosome_2A	17990	16	193	33.735408560311285	0.380336266566531	71.82780066230515	193	0.8911917098445595	78.52865697177074	49	0.8979591836734694	70.26784825251418	144	0.8888888888888888	0.8495145631067961	51	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008220	Chromosome_2A	1026	1	35	39.57115009746589	0.8717500546209307	0.31007751937984496	35	0	0.31007751937984496	35	0	NA	NA	NA	0.5108055009823183	58	0	unmethylated (<10%)	Q0GC71	Toll-like receptor 2 (CD antigen CD282)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to triacyl bacterial lipopeptide [GO:0071727]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN008221	Chromosome_2A	2720	8	97	38.786764705882355	0.9497685335176426	0.5528846153846154	97	0	0.5164319248826291	52	0	0.5911330049261084	45	0	2.982646420824295	60	0	unmethylated (<10%)	O02467	N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC 3.5.1.26) (Aspartylglucosaminidase) (AGA) (Glycosylasparaginase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) [Cleaved into: Glycosylasparaginase alpha chain; Glycosylasparaginase beta chain]	NA	hit, no GO BP
GN008222	Chromosome_2A	42325	26	505	34.45717660956881	0.4031602607553037	81.94025493821154	503	0.9502982107355865	90.19740172093807	121	1	79.97510440089945	382	0.9345549738219895	61.673151750972764	8	0.75	methylated (>=50%)	P53767	Vascular endothelial growth factor receptor 1 (VEGFR-1) (EC 2.7.10.1) (Fms-like tyrosine kinase 1) (FLT-1) (Tyrosine-protein kinase receptor FLT)	angiogenesis [GO:0001525]; blood vessel morphogenesis [GO:0048514]; branching involved in blood vessel morphogenesis [GO:0001569]; cell migration [GO:0016477]; cellular response to hypoxia [GO:0071456]; cellular response to vascular endothelial growth factor stimulus [GO:0035924]; embryonic morphogenesis [GO:0048598]; female pregnancy [GO:0007565]; hyaloid vascular plexus regression [GO:1990384]; intracellular receptor signaling pathway [GO:0030522]; liver regeneration [GO:0097421]; monocyte chemotaxis [GO:0002548]; negative regulation of sprouting angiogenesis [GO:1903671]; negative regulation of vascular endothelial cell proliferation [GO:1905563]; negative regulation of vascular endothelial growth factor production [GO:1904046]; peptidyl-tyrosine phosphorylation [GO:0018108]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of glial cell proliferation [GO:0060252]; positive regulation of hematopoietic progenitor cell differentiation [GO:1901534]; positive regulation of MAP kinase activity [GO:0043406]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of vascular permeability [GO:0043117]; post-embryonic camera-type eye morphogenesis [GO:0048597]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of smooth muscle contraction [GO:0006940]; response to activity [GO:0014823]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; sprouting angiogenesis [GO:0002040]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]; vascular endothelial growth factor receptor-1 signaling pathway [GO:0036323]	hit with GO BP
GN008223	Chromosome_2A	7899	7	240	38.447904798075704	0.8287540623270478	3.066914498141264	225	0.022222222222222223	15.045871559633028	36	0.1111111111111111	1.5475913427973005	189	0.005291005291005291	2.144160583941606	69	0	unmethylated (<10%)	Q9CR35	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]	positive regulation of apoptotic process [GO:0043065]; protein catabolic process [GO:0030163]; proteolysis [GO:0006508]; response to cytokine [GO:0034097]	hit with GO BP
GN008224	Chromosome_2A	5348	6	116	36.57442034405385	0.6504309169829521	38.86727866811887	116	0.35344827586206895	42.59615384615385	26	0.38461538461538464	38.147391869315015	90	0.34444444444444444	42.29853791227474	43	0.46511627906976744	sparse (10-50%)	P53370	Nudix hydrolase 6 (Antisense basic fibroblast growth factor) (FAD diphosphatase NUDT6) (EC 3.6.1.18) (NADH pyrophosphatase NUDT6) (EC 3.6.1.22) (Nucleoside diphosphate-linked moiety X motif 6) (Nudix motif 6) (Protein GFG)	negative regulation of cell cycle [GO:0045786]; negative regulation of cell population proliferation [GO:0008285]	hit with GO BP
GN008225	Chromosome_2A	9509	7	356	43.76906088968346	0.7829465324844253	1.6841223292836196	288	0	0.49594229035166815	51	0	1.955336009056293	237	0	0.8023106546854942	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008226	Chromosome_2A	31130	17	427	35.97815611949888	0.42387967100775886	85.25130123617437	418	0.937799043062201	85.7910447761194	30	0.8	85.2118514639787	388	0.9484536082474226	29.851752021563343	73	0.1780821917808219	methylated (>=50%)	Q9SVG0	Amino acid transporter AVT3C (AtAvt3C) (Aromatic and neutral amino acid transporter-like protein 2)	amino acid transmembrane transport [GO:0003333]; neutral amino acid transport [GO:0015804]	hit with GO BP
GN008227	Chromosome_2A	2511	1	87	43.44882516925528	0.7345857936433212	92.99731460442058	87	1	92.99731460442058	87	1	NA	NA	NA	22.8322216521293	31	0.03225806451612903	methylated (>=50%)	P80944	Zinc finger X-chromosomal protein	NA	hit, no GO BP
GN008228	Chromosome_2A	15521	15	240	36.60846594935893	0.4615507567182793	89.82411213693645	238	1	93.60393603936039	71	1	88.76326918097868	167	1	53.403601229688185	39	0.38461538461538464	methylated (>=50%)	P98072	Enteropeptidase (EC 3.4.21.9) (Enterokinase) (Serine protease 7) (Transmembrane protease serine 15) [Cleaved into: Enteropeptidase non-catalytic heavy chain; Enteropeptidase catalytic light chain]	protein digestion [GO:0044256]; protein processing [GO:0016485]; trypsinogen activation [GO:0032023]	hit with GO BP
GN008229	Chromosome_2A	357	1	17	42.296918767507	1.065858798735511	0	3	0	0	3	0	NA	NA	NA	0.6329113924050633	7	0	NA	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN008230	Chromosome_2A	1256	2	32	37.738853503184714	0.7161796151104776	1.6	18	0	0.8333333333333334	3	0	1.746031746031746	15	0	0.936768149882904	16	0	unmethylated (<10%)	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN008231	Chromosome_2A	3953	7	46	34.07538578294966	0.4011161846778285	17.4279690794097	46	0.13043478260869565	23.091603053435115	13	0.23076923076923078	16.149870801033593	33	0.09090909090909091	2.1818181818181817	6	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008232	Chromosome_2A	249	1	2	42.570281124497996	0.17735042735042736	0	2	0	0	2	0	NA	NA	NA	0.9958071278825996	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008233	Chromosome_2A	69221	28	1132	35.831611794108724	0.5106245155193527	82.48600746268657	1027	0.9337877312560857	90.89867617107943	174	0.9942528735632183	81.10591379886402	853	0.9214536928487691	76.6497461928934	7	1	methylated (>=50%)	P22897	Macrophage mannose receptor 1 (MMR) (C-type lectin domain family 13 member D) (C-type lectin domain family 13 member D-like) (Human mannose receptor) (hMR) (Macrophage mannose receptor 1-like protein 1) (CD antigen CD206)	receptor-mediated endocytosis [GO:0006898]	hit with GO BP
GN008234	Chromosome_2A	540	1	28	42.03703703703704	1.2217194570135748	49.733475479744136	28	0.35714285714285715	49.733475479744136	28	0.35714285714285715	NA	NA	NA	78.3084004602992	34	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008235	Chromosome_2A	39841	26	538	35.25262920107427	0.44177497658131515	72.5144643213407	532	0.8327067669172933	78.99408284023669	117	0.8290598290598291	71.09381334630666	415	0.8337349397590361	5.391467416783873	57	0	methylated (>=50%)	Q8IV35	Cilia- and flagella-associated protein 337 (WD repeat-containing protein 49)	NA	hit, no GO BP
GN008236	Chromosome_2A	5098	6	82	34.935268732836406	0.5404263570902228	90.60084766891049	82	1	89.94974874371859	18	1	90.69304112708126	64	1	88.42105263157895	20	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008237	Chromosome_2A	10449	5	124	35.60149296583405	0.4072056975282782	71.6993755575379	77	0.8051948051948052	91.03260869565217	6	1	69.97084548104957	71	0.7887323943661971	0.547945205479452	51	0	methylated (>=50%)	Q8LFJ5	Multifunctional methyltransferase subunit TRM112 homolog A (Multifunctional methyltransferase subunit TRM112-like protein At1g22270) (Protein SMALL ORGAN 2) (tRNA methyltransferase 112 homolog A) (AtTRM112a)	maturation of LSU-rRNA [GO:0000470]; maturation of SSU-rRNA [GO:0030490]; organ growth [GO:0035265]; regulation of cell cycle [GO:0051726]; regulation of cell population proliferation [GO:0042127]	hit with GO BP
GN008238	Chromosome_2A	639	1	21	41.78403755868545	0.7632237515640996	0.37735849056603776	21	0	0.37735849056603776	21	0	NA	NA	NA	0.7591093117408907	46	0	unmethylated (<10%)	P38542	GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4)	embryo development ending in birth or egg hatching [GO:0009792]; oogenesis [GO:0048477]; protein import into nucleus [GO:0006606]; ribosomal subunit export from nucleus [GO:0000054]	hit with GO BP
GN008239	Chromosome_2A	5297	5	127	34.717764772512744	0.7961850003787305	4.373956594323873	94	0	2.2099447513812156	22	0	4.67147740220281	72	0	1.3188073394495412	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008240	Chromosome_2A	2809	4	34	34.4250622997508	0.4132312218760817	85.30892448512586	34	1	90.2135231316726	10	1	83.61059765865681	24	1	5.792163543441227	20	0	methylated (>=50%)	Q1RMP0	DNA-directed RNA polymerase I subunit RPA12 (DNA-directed RNA polymerase I subunit H)	termination of RNA polymerase I transcription [GO:0006363]	hit with GO BP
GN008241	Chromosome_2A	16363	14	420	38.47094053657642	0.6940626670784442	2.4119530416221986	378	0.007936507936507936	1.1111111111111112	60	0	2.6224426534407934	318	0.009433962264150943	1.070154577883472	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008242	Chromosome_2A	363	1	10	43.25068870523416	0.5931372549019608	0.6666666666666666	10	0	0.6666666666666666	10	0	NA	NA	NA	0.8695652173913043	26	0	unmethylated (<10%)	Q05A80	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)	negative regulation of cell growth [GO:0030308]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN008243	Chromosome_2A	324	1	13	42.901234567901234	0.9116883116883117	17.447495961227787	13	0	17.447495961227787	13	0	NA	NA	NA	0.6998444790046656	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008244	Chromosome_2A	657	1	27	38.81278538812786	1.095	0.4491017964071856	27	0	0.4491017964071856	27	0	NA	NA	NA	0.5048683736025965	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008245	Chromosome_2A	11822	7	395	39.189646421925225	0.8825105785458208	1.4783927217589083	254	0	0.3536693191865606	23	0	1.6134168347309203	231	0	2.0622422197225347	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008246	Chromosome_2A	8015	4	138	34.47286338116032	0.5812726437612792	78.61063789513534	121	0.9338842975206612	58.659217877094974	3	0.6666666666666666	79.3103448275862	118	0.940677966101695	0.37174721189591076	4	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008247	Chromosome_2A	48780	14	832	35.41615416154161	0.5465793539462032	84.03031788528979	825	0.9454545454545454	89.50033760972316	57	0.9473684210526315	83.7067657161115	768	0.9453125	80.7843137254902	13	0.9230769230769231	methylated (>=50%)	Q08DA0	Rab-like protein 6 (EC 3.6.5.2) (GTP-binding protein Parf) (Rab-like protein 1) (RBEL1)	NA	hit, no GO BP
GN008248	Chromosome_2A	24933	16	286	36.1488789957085	0.35410635648012967	70.98577235772358	223	0.7085201793721974	82.12173913043478	58	0.8793103448275862	67.40176872271354	165	0.6484848484848484	63.65237815619495	34	0.5882352941176471	methylated (>=50%)	A7MBH5	Outer dynein arm-docking complex subunit 3 (Coiled-coil domain-containing protein 151)	cilium movement [GO:0003341]; outer dynein arm assembly [GO:0036158]; regulation of cilium assembly [GO:1902017]	hit with GO BP
GN008249	Chromosome_2A	8805	3	163	35.5366269165247	0.5915489997106584	77.88835328875759	160	0.8	46.506024096385545	10	0.4	78.93468305615811	150	0.8266666666666667	1.3215859030837005	6	0	methylated (>=50%)	Q5ZMV3	Protein Dr1 (Down-regulator of transcription 1) (Negative cofactor 2-beta) (NC2-beta) (TATA-binding protein-associated phosphoprotein)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of embryonic development [GO:0045995]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN008250	Chromosome_2A	938	2	31	40.298507462686565	0.8191908947487041	0.5474452554744526	31	0	0.30272452068617556	29	0	2.857142857142857	2	0	1.4883346741753822	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008251	Chromosome_2A	558	1	16	41.577060931899645	0.6666666666666666	0.2544529262086514	16	0	0.2544529262086514	16	0	NA	NA	NA	0.7531106745252129	67	0	unmethylated (<10%)	Q708S8	Acid-sensing ion channel 1B (ASIC1-B) (Acid-sensing ion channel 1.1-B) (Amiloride-sensitive cation channel 2-A, neuronal-B) (ZASIC1.1)	cellular response to pH [GO:0071467]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN008252	Chromosome_2A	13141	6	295	36.77802298150826	0.6646351771214055	1.8242948757860655	294	0	0.4051316677920324	41	0	1.9684499314128945	253	0	0.6373937677053825	71	0	unmethylated (<10%)	Q708S5	Acid-sensing ion channel 2 (ASIC2) (ZASIC2)	response to steroid hormone [GO:0048545]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN008253	Chromosome_2A	1116	1	55	45.25089605734767	0.9760519034443278	0.896551724137931	54	0	0.896551724137931	54	0	NA	NA	NA	0.31545741324921134	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008254	Chromosome_2A	1248	1	52	42.94871794871795	0.9050667336094724	0.6699147381242387	51	0	0.6699147381242387	51	0	NA	NA	NA	0.4868913857677903	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008255	Chromosome_2A	1800	1	74	44.611111111111114	0.8269696405289626	0.6619385342789598	74	0	0.6619385342789598	74	0	NA	NA	NA	0.6679035250463822	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008256	Chromosome_2A	8949	6	222	37.64666443178009	0.7050457803960537	0.896551724137931	186	0	0.7266629401900503	62	0	0.9522065555759018	124	0	0.8318890814558059	40	0	unmethylated (<10%)	Q96LT4	Sphingomyelin synthase-related protein 1 (SMSr) (EC 2.7.8.-) (Ceramide phosphoethanolamine synthase) (CPE synthase) (Phosphatidylethanolamine Phospholipase C) (PE-PLC) (EC 3.1.4.62) (Sterile alpha motif domain-containing protein 8) (SAM domain-containing protein 8)	ceramide biosynthetic process [GO:0046513]; regulation of ceramide biosynthetic process [GO:2000303]; sphingomyelin biosynthetic process [GO:0006686]	hit with GO BP
GN008257	Chromosome_2A	5691	6	67	35.61764189070462	0.37661938721084137	88.63464923309027	66	0.9545454545454546	92.85714285714286	24	1	86.08309802339653	42	0.9285714285714286	57.142857142857146	14	0.5	methylated (>=50%)	Q7ZUC7	Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2)	prostaglandin biosynthetic process [GO:0001516]	hit with GO BP
GN008258	Chromosome_2A	4567	5	161	38.47164440551784	0.9533086995980812	57.40221761910564	150	0.5266666666666666	66.23475609756098	23	0.5652173913043478	55.72153734590283	127	0.5196850393700787	0.3218884120171674	50	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008259	Chromosome_2A	1084	2	44	41.32841328413284	0.9548557586434706	0.5984440454817475	44	0	0.5012531328320802	32	0	0.8438818565400844	12	0	0.44726052925829296	68	0	unmethylated (<10%)	Q6IR37	Probable palmitoyltransferase ZDHHC24 (EC 2.3.1.225) (Zinc finger DHHC domain-containing protein 24)	protein targeting to membrane [GO:0006612]	hit with GO BP
GN008260	Chromosome_2A	456	1	14	40.78947368421053	0.7506172839506173	2.968960863697706	14	0	2.968960863697706	14	0	NA	NA	NA	0.7000538502961766	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008261	Chromosome_2A	29584	18	356	36.59072471606274	0.36128622911985314	75.99499523355577	345	0.8869565217391304	88.69342715496562	179	0.9720670391061452	68.4550375083088	166	0.7951807228915663	80.94848732624693	21	1	methylated (>=50%)	Q7Z591	Microtubule organization protein AKNA (AT-hook-containing transcription factor)	delamination [GO:0060232]; epithelial to mesenchymal transition [GO:0001837]; neuroblast delamination [GO:0060234]; neuroblast division in subventricular zone [GO:0021849]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of inflammatory response [GO:0050727]	hit with GO BP
GN008262	Chromosome_2A	3795	5	52	37.15415019762846	0.3987399703783928	55.60995512035904	52	0.6730769230769231	15.272727272727273	6	0.3333333333333333	60.7077205882353	46	0.717391304347826	62.551159618008185	43	0.7674418604651163	methylated (>=50%)	Q9UGQ2	Calcium channel flower homolog (Calcium channel flower domain-containing protein 1)	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN020464	Chromosome_2A	702	1	33	52.56410256410256	0.6811526021758306	8.303249097472925	33	0	8.303249097472925	33	0	NA	NA	NA	12.213136375626483	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008263	Chromosome_2A	4586	4	41	35.5865678150894	0.2843570789072519	75.48184670551322	41	0.8048780487804879	64.92434662998625	15	0.7333333333333333	80.58510638297872	26	0.8461538461538461	11.093990755007704	14	0.07142857142857142	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008264	Chromosome_2A	1832	3	19	34.879912663755455	0.34150935991523096	93.21561338289963	19	1	98.33333333333333	3	1	92.1875	16	1	72.95081967213115	16	0.8125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008265	Chromosome_2A	25111	25	498	37.42184699932301	0.5698218832438362	81.81243492488473	457	0.912472647702407	85.59691912708601	66	0.9242424242424242	81.17145714658433	391	0.9104859335038363	70.79584775086505	37	0.6486486486486487	methylated (>=50%)	Q27746	DNA (cytosine-5)-methyltransferase PliMCI (EC 2.1.1.37) (DNA methyltransferase PliMCI) (DNA MTase PliMCI) (M.PliMCI) (Dnmt1) (MCMT)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]	hit with GO BP
GN008266	Chromosome_2A	327	1	14	50.45871559633027	0.708230198019802	0.746268656716418	14	0	0.746268656716418	14	0	NA	NA	NA	0.5226130653266332	58	0	unmethylated (<10%)	D9HP19	Cell number regulator 3 (ZmCNR03)	NA	hit, no GO BP
GN008267	Chromosome_2A	1567	2	23	33.88640714741544	0.5114374911309777	73.69186046511628	18	0.9444444444444444	76.87687687687688	11	1	70.70422535211267	7	0.8571428571428571	71.55486219448778	23	0.8260869565217391	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008268	Chromosome_2A	2037	2	51	43.24987727049583	0.5411626816690108	93.34016393442623	51	1	93.34016393442623	51	1	NA	NA	NA	43.24324324324324	13	0.23076923076923078	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008269	Chromosome_2A	828	1	2	43.11594202898551	0.05776072549703523	88.88888888888889	2	1	88.88888888888889	2	1	NA	NA	NA	80.61111111111111	24	0.9583333333333334	NA	NA	NA	NA	no Swiss-Prot hit
GN008270	Chromosome_2A	891	1	40	48.9337822671156	0.7522161249472351	0.34965034965034963	40	0	0.34965034965034963	40	0	NA	NA	NA	0.6170723345903325	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008271	Chromosome_2A	891	1	38	48.597081930415264	0.724390243902439	0.4694835680751174	38	0	0.4694835680751174	38	0	NA	NA	NA	0.5466970387243736	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008272	Chromosome_2A	1803	1	60	39.545202440377146	0.8537470799924237	0.6203473945409429	60	0	0.6203473945409429	60	0	NA	NA	NA	0.25906735751295334	38	0	unmethylated (<10%)	Q99PP7	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin homolog) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	gene expression [GO:0010467]; negative regulation of BMP signaling pathway [GO:0030514]; protein ubiquitination [GO:0016567]; regulation of transforming growth factor beta receptor signaling pathway [GO:0017015]	hit with GO BP
GN008273	Chromosome_2A	9443	6	93	32.224928518479295	0.38539947829261956	80.75930144267274	91	0.9230769230769231	90.2090209020902	13	1	79.24594785059901	78	0.9102564102564102	79.29292929292929	5	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008274	Chromosome_2A	16118	10	202	33.92480456632337	0.4366580564518941	92.59925201380898	199	0.9949748743718593	96.19741100323624	25	1	92.24818440164194	174	0.9942528735632183	80.4609563123495	41	0.8048780487804879	methylated (>=50%)	P23128	ATP-dependent RNA helicase me31b (EC 3.6.4.13) (Maternal expression at 31B)	deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; follicle cell of egg chamber development [GO:0030707]; habituation [GO:0046959]; miRNA-mediated gene silencing by inhibition of translation [GO:0035278]; miRNA-mediated post-transcriptional gene silencing [GO:0035195]; negative regulation of cytoplasmic translation [GO:2000766]; negative regulation of translation [GO:0017148]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; P-body assembly [GO:0033962]; pole cell formation [GO:0007279]; positive regulation of mRNA catabolic process [GO:0061014]; positive regulation of post-transcriptional gene silencing [GO:0060148]; regulation of defense response to virus [GO:0050688]; regulation of neuron projection arborization [GO:0150011]; regulation of olfactory learning [GO:0090328]; stress granule assembly [GO:0034063]	hit with GO BP
GN008275	Chromosome_2A	12369	16	364	37.06847764572722	0.8579271708683474	0.8164518109269491	358	0	0.7440957618893562	73	0	0.8333964694295022	285	0	0.5991611743559018	32	0	unmethylated (<10%)	A8J4S9	Trehalase (EC 3.2.1.28) (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase)	trehalose catabolic process [GO:0005993]	hit with GO BP
GN008276	Chromosome_2A	1822	2	22	37.321624588364436	0.347255070128475	0.49645390070921985	22	0	0.3824091778202677	9	0	0.5636978579481398	13	0	1.045510455104551	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008277	Chromosome_2A	1311	1	13	38.13882532418002	0.2727578260034569	3.088803088803089	13	0	3.088803088803089	13	0	NA	NA	NA	2.596239928379588	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008278	Chromosome_2A	3491	6	111	40.303637926095675	0.7830169616191335	0.5579507988840984	111	0	0.4844290657439446	42	0	0.600480384307446	69	0	0.4807692307692308	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008279	Chromosome_2A	10552	4	299	38.097043214556486	0.7988476513096978	0.9824561403508771	299	0	1.1225220921901122	225	0	0.7189395641428893	74	0	0.642292490118577	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008280	Chromosome_2A	588	1	19	47.10884353741496	0.5830289113871203	0.7125890736342043	19	0	0.7125890736342043	19	0	NA	NA	NA	2.3239917976760083	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008281	Chromosome_2A	2845	3	25	35.07908611599297	0.28567010474905213	59.74025974025974	2	0.5	NA	NA	NA	59.74025974025974	2	0.5	71.42857142857143	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008282	Chromosome_2A	4748	4	44	32.41364785172704	0.3536541599799568	84.70588235294117	8	1	NA	NA	NA	84.70588235294117	8	1	33.97110503709489	69	0.34782608695652173	methylated (>=50%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN008283	Chromosome_2A	13143	15	152	35.26592102259758	0.37773496972048454	82.9903297793206	152	0.9210526315789473	92	38	1	80.16609672691744	114	0.8947368421052632	65.96692111959288	26	0.6923076923076923	methylated (>=50%)	Q15291	Retinoblastoma-binding protein 5 (RBBP-5) (Retinoblastoma-binding protein RBQ-3)	DNA damage response [GO:0006974]; response to estrogen [GO:0043627]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN008284	Chromosome_2A	11687	13	114	35.646444767690596	0.3132194304857621	81.62625762823684	114	0.9035087719298246	92.47900693683826	52	1	72.6835138387485	62	0.8225806451612904	82.11586901763224	19	1	methylated (>=50%)	Q8N7N5	DDB1- and CUL4-associated factor 8 (WD repeat-containing protein 42A)	myotube cell development [GO:0014904]; protein ubiquitination [GO:0016567]; single fertilization [GO:0007338]; spermatogenesis [GO:0007283]	hit with GO BP
GN008285	Chromosome_2A	14063	9	162	34.359667211832466	0.3903272695872431	80.59266700150678	162	0.9135802469135802	76.85984381422112	56	0.8928571428571429	81.80005317734646	106	0.9245283018867925	49.59016393442623	35	0.5714285714285714	methylated (>=50%)	P16386	Hormone-sensitive lipase (HSL) (EC 3.1.1.79) (Monoacylglycerol lipase LIPE) (EC 3.1.1.23) (Retinyl ester hydrolase) (REH)	cholesterol metabolic process [GO:0008203]; diacylglycerol catabolic process [GO:0046340]; ether lipid metabolic process [GO:0046485]; lipid catabolic process [GO:0016042]; termination of RNA polymerase I transcription [GO:0006363]; transcription initiation at RNA polymerase I promoter [GO:0006361]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN008286	Chromosome_2A	1296	1	73	46.141975308641975	1.0585392051557465	0.5515719801434087	73	0	0.5515719801434087	73	0	NA	NA	NA	0.8171315863623556	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008287	Chromosome_2A	754	2	28	39.12466843501326	0.9876497005988024	0.18867924528301888	28	0	0	21	0	0.5037783375314862	7	0	0.5145278450363197	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008288	Chromosome_2A	2145	1	81	39.11421911421911	0.9901466883982812	0.7972665148063781	47	0	0.7972665148063781	47	0	NA	NA	NA	1.3736263736263736	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008289	Chromosome_2A	1920	1	69	39.739583333333336	0.9112294168626965	1.3736263736263736	16	0	1.3736263736263736	16	0	NA	NA	NA	0.468384074941452	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008290	Chromosome_2A	1119	1	40	39.231456657730114	0.933083176985616	0	3	0	0	3	0	NA	NA	NA	0.5959475566150179	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008291	Chromosome_2A	1969	2	73	39.71559167089893	0.941075181521177	0.6150061500615006	38	0	0.5012531328320802	37	0	6.666666666666667	1	0	0.40080160320641284	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008292	Chromosome_2A	1386	1	40	37.734487734487736	0.8179162609542356	0.6230529595015576	26	0	0.6230529595015576	26	0	NA	NA	NA	0.4493464052287582	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008293	Chromosome_2A	1597	2	75	42.517219787100814	1.0403637690223055	0.2533783783783784	75	0	0.24307243558580457	70	0	0.3215434083601286	5	0	0.30998140111593303	60	0	unmethylated (<10%)	Q8K2J9	BTB/POZ domain-containing protein 6	neurogenesis [GO:0022008]	hit with GO BP
GN008294	Chromosome_2A	784	2	29	45.1530612244898	0.7285311458600359	0.8016032064128257	23	0	0.9685230024213075	21	0	0	2	0	0.5321722302854378	69	0	unmethylated (<10%)	Q58PK5	Peptidylaminoacyl-L/D-isomerase polyprotein 2 (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN008295	Chromosome_2A	38175	15	850	35.07793058284217	0.7239348645022835	0.7433513001243854	842	0	1.2797724848915748	48	0	0.7118070072748558	794	0	0.5639854975157782	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020016	Chromosome_2A	1278	2	39	40.062597809076685	0.7635110294117647	0.9900990099009901	39	0	1.09717868338558	37	0	0	2	0	0.6709533128319821	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008296	Chromosome_2A	306	2	8	42.48366013071895	0.5795454545454546	0.5242463958060288	8	0	0.5891016200294551	7	0	0	1	0	2.073050345508391	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008297	Chromosome_2A	492	2	22	43.49593495934959	0.9507246376811594	0.24330900243309003	22	0	0.2849002849002849	18	0	0	4	0	2.5641025641025643	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008298	Chromosome_2A	706	2	26	40.50991501416431	0.9583877199394351	0.45045045045045046	22	0	0.45045045045045046	22	0	NA	NA	NA	0.5163511187607573	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008299	Chromosome_2A	1261	2	35	37.03409992069786	0.8508771929824561	0	9	0	0	9	0	NA	NA	NA	0.5791991941576429	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008300	Chromosome_2A	975	1	57	47.38461538461539	1.0415104947526237	0.7651109410864575	57	0	0.7651109410864575	57	0	NA	NA	NA	0.8385744234800838	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008301	Chromosome_2A	2703	2	34	37.66185719570847	0.35532786885245904	82.92978208232445	33	0.8484848484848485	86.32040965618143	24	0.875	66.66666666666667	9	0.7777777777777778	2.642007926023778	32	0	methylated (>=50%)	Q9BG99	Three-prime repair exonuclease 1 (EC 3.1.11.2) (3'-5' exonuclease TREX1)	DNA metabolic process [GO:0006259]; DNA repair [GO:0006281]; negative regulation of innate immune response [GO:0045824]	hit with GO BP
GN008302	Chromosome_2A	2147	2	53	41.40661387983232	0.5770334685598377	85.66243194192377	18	1	84.50704225352112	15	1	89.6	3	1	86.9201030927835	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008303	Chromosome_2A	1663	6	40	38.484666265784725	0.6609960650264319	49.80544747081712	40	0.625	54.48613376835237	29	0.7586206896551724	39.79057591623037	11	0.2727272727272727	55.70957095709571	33	0.8181818181818182	sparse (10-50%)	Q08257	Zeta-crystallin (NADPH:quinone reductase) (Quinone oxidoreductase) (EC 1.6.5.5)	mRNA stabilization [GO:0048255]; protein homotetramerization [GO:0051289]; visual perception [GO:0007601]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN008304	Chromosome_2A	2098	3	77	43.42230695900858	0.78336727766463	0.963855421686747	77	0	0.9375	61	0	1.0526315789473684	16	0	0.5780346820809249	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008305	Chromosome_2A	3253	6	98	39.348293882569934	0.7789922270360352	0.6524466750313677	98	0	0.5572065378900446	73	0	0.8507347254447022	25	0	0.462198745460548	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008306	Chromosome_2A	6943	4	189	35.08569782514763	0.88470606478407	0.8454479843282813	189	0	2.303120356612184	62	0	0.6105590805698552	127	0	0.873015873015873	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011784	Chromosome_2A	1611	1	2	31.409062693978896	0.0799642617824436	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8135168961201502	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008307	Chromosome_2A	11060	13	229	36.56419529837251	0.6242107224434308	0.8177236854616335	229	0	0.8145849495733126	66	0	0.8187429147247764	163	0	0.3952569169960474	15	0	unmethylated (<10%)	Q96RW7	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008308	Chromosome_2A	702	2	30	42.022792022792025	0.9910588235294118	0.38872691933916426	30	0	0.38872691933916426	30	0	NA	NA	NA	0.3155996393146979	52	0	unmethylated (<10%)	P80025	Lactoperoxidase (LPO) (EC 1.11.1.7)	antibacterial humoral response [GO:0019731]; defense response to bacterium [GO:0042742]; detection of chemical stimulus involved in sensory perception of bitter taste [GO:0001580]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]	hit with GO BP
GN008309	Chromosome_2A	8746	10	271	35.97072947633204	0.9582282186127444	0.5989180834621329	242	0	0.29771749917300694	79	0	0.7231545913494337	163	0	1.2552301255230125	15	0	unmethylated (<10%)	P11247	Myeloperoxidase (MPO) (EC 1.11.2.2) [Cleaved into: Myeloperoxidase light chain; Myeloperoxidase heavy chain]	defense response to bacterium [GO:0042742]; defense response to fungus [GO:0050832]; hydrogen peroxide catabolic process [GO:0042744]; hypochlorous acid biosynthetic process [GO:0002149]; low-density lipoprotein particle remodeling [GO:0034374]; neutrophil extracellular trap formation [GO:0140645]; neutrophil-mediated killing of bacterium [GO:0070944]; neutrophil-mediated killing of fungus [GO:0070947]; neutrophil-mediated killing of symbiont cell [GO:0070943]; nucleosome disassembly [GO:0006337]; positive regulation of cholesterol import [GO:1904109]; removal of superoxide radicals [GO:0019430]; respiratory burst involved in defense response [GO:0002679]; response to food [GO:0032094]; response to gold nanoparticle [GO:1990268]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to oxidative stress [GO:0006979]; response to yeast [GO:0001878]	hit with GO BP
GN008310	Chromosome_2A	702	2	31	42.022792022792025	1.0100250626566416	0	5	0	0	5	0	NA	NA	NA	0.5808325266214908	41	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN008311	Chromosome_2A	443	2	9	36.3431151241535	0.642235824742268	9.183673469387756	9	0	9.183673469387756	9	0	NA	NA	NA	4.620749782040105	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008312	Chromosome_2A	492	1	17	49.59349593495935	0.5657467532467533	2.7777777777777777	17	0	2.7777777777777777	17	0	NA	NA	NA	0.24154589371980675	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008313	Chromosome_2A	1720	4	55	40.75581395348837	0.7704963429930444	0.4638833664678595	51	0	0.5728314238952537	41	0	0	10	0	0.6592889098186956	66	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN008314	Chromosome_2A	1079	2	16	37.812789620018535	0.4350806451612903	1.3262599469496021	16	0	1.4462809917355373	10	0	1.1111111111111112	6	0	0.6266786034019696	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008315	Chromosome_2A	3428	5	105	40.34422403733956	0.7549615534664804	0.9539320614239181	104	0	0.6489675516224189	80	0	2.092511013215859	24	0	0.30181086519114686	51	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN008316	Chromosome_2A	8084	15	173	35.7372587827808	0.6704282013472495	0.795937971730479	172	0	0.674373795761079	75	0	0.8866522885214474	97	0	0.4467609828741623	59	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN008317	Chromosome_2A	3184	7	76	35.92964824120603	0.7412476451578318	0.5847953216374269	76	0	0.9196811771919068	32	0	0.37821482602118	44	0	0.2117746717492588	34	0	unmethylated (<10%)	Q8BML2	O-acyltransferase like protein (Protein oacyl)	NA	hit, no GO BP
GN001862	Chromosome_2A	480	1	10	55	0.2786162061759926	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6353240152477764	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008318	Chromosome_2A	432	1	9	54.861111111111114	0.2805194805194805	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7727272727272727	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008319	Chromosome_2A	6012	14	147	36.39387890884897	0.7385212427517429	0.6547784898300362	147	0	0.5277973258268824	65	0	0.7380073800738007	82	0	0.3614457831325301	49	0	unmethylated (<10%)	Q09225	Nose resistant to fluoxetine protein 6 (Protein nrf-6)	NA	hit, no GO BP
GN008320	Chromosome_2A	10678	4	284	35.952425547855405	0.8233426186869098	0.7797745964057264	284	0	0.6050129645635264	63	0	0.8084533011843131	221	0	4.245029554003224	25	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN008321	Chromosome_2A	10572	12	141	36.927733636019674	0.39122845280659746	77.56272401433692	141	0.9148936170212766	86.05515959095135	65	0.9846153846153847	72.23410460820533	76	0.8552631578947368	60.16949152542373	18	0.6666666666666666	methylated (>=50%)	Q8BR86	Kin of IRRE-like protein 3 (Kin of irregular chiasm-like protein 3) (Nephrin-like protein 2) (mKirre) [Cleaved into: Processed kin of IRRE-like protein 3]	cell-cell adhesion [GO:0098609]; glomerulus morphogenesis [GO:0072102]; hemopoiesis [GO:0030097]; hippocampus development [GO:0021766]; homophilic cell-cell adhesion [GO:0007156]; inter-male aggressive behavior [GO:0002121]; neuron migration [GO:0001764]; neuron projection morphogenesis [GO:0048812]; principal sensory nucleus of trigeminal nerve development [GO:0021740]; synapse assembly [GO:0007416]	hit with GO BP
GN008322	Chromosome_2A	22535	9	247	35.975149767029066	0.34163114495008545	74.01794616151545	214	0.8785046728971962	81.33946830265849	40	0.975	72.24424077285113	174	0.8563218390804598	79.34044616876818	23	0.9565217391304348	methylated (>=50%)	Q6DJ83	Cell adhesion molecule 2 (Immunoglobulin superfamily member 4D) (IgSF4D)	homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN008323	Chromosome_2A	390	2	15	35.38461538461539	1.2289915966386555	0.7598784194528876	15	0	0.9652509652509652	13	0	0	2	0	0.7272727272727273	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008324	Chromosome_2A	1599	1	61	38.774233896185116	1.0196531429347997	0.3937007874015748	61	0	0.3937007874015748	61	0	NA	NA	NA	0.5931784478497282	41	0	unmethylated (<10%)	Q9V477	Toll-like receptor Tollo (Toll-like receptor 8)	axis elongation [GO:0003401]; convergent extension [GO:0060026]; peripheral nervous system neuron development [GO:0048935]; regulation of glycoprotein biosynthetic process [GO:0010559]; signal transduction [GO:0007165]	hit with GO BP
GN008325	Chromosome_2A	480	1	31	46.875	1.1928811928811929	0.2994011976047904	31	0	0.2994011976047904	31	0	NA	NA	NA	0.918133129303749	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008326	Chromosome_2A	22546	19	285	35.37212809367515	0.40683336661558045	81.38763197586727	283	0.9151943462897526	84.0825350036846	56	0.9642857142857143	80.85996681336123	227	0.9030837004405287	51.03155339805825	24	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008327	Chromosome_2A	9852	6	112	34.30775477060495	0.38633954915428353	91.16997792494482	91	0.967032967032967	87.81204111600587	15	0.9333333333333333	91.60906298003073	76	0.9736842105263158	81.01941747572816	38	0.7105263157894737	methylated (>=50%)	Q8BH75	E3 ubiquitin-protein ligase NRDP1 (EC 2.3.2.27) (RING finger protein 41) (RING-type E3 ubiquitin transferase NRDP1)	extrinsic apoptotic signaling pathway [GO:0097191]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of mitophagy [GO:1901525]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; proteasomal protein catabolic process [GO:0010498]; protein autoubiquitination [GO:0051865]; protein polyubiquitination [GO:0000209]; regulation of lymphocyte differentiation [GO:0045619]; regulation of MAPK cascade [GO:0043408]; regulation of myeloid cell differentiation [GO:0045637]; regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051896]; regulation of reactive oxygen species metabolic process [GO:2000377]	hit with GO BP
GN008328	Chromosome_2A	19541	9	281	35.238728826569776	0.4635071598118629	81.79325298131496	236	0.9576271186440678	79.72055888223552	38	0.9736842105263158	82.18731026108075	198	0.9545454545454546	89.98618784530387	25	0.96	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008329	Chromosome_2A	1194	3	23	35.92964824120603	0.6108911331583396	57.35821966977746	23	0.782608695652174	61.11696522655427	18	0.8888888888888888	49.32432432432432	5	0.4	63.58974358974359	34	0.8235294117647058	methylated (>=50%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN008330	Chromosome_2A	4929	6	158	39.257455873402314	0.8380758676351897	63.60884443274546	157	0.7579617834394905	74.32299359921221	92	0.9456521739130435	51.300904977375566	65	0.49230769230769234	79.15381225209343	39	0.9743589743589743	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008331	Chromosome_2A	3825	4	34	33.51633986928105	0.31781524926686217	77.04688593421973	34	0.9705882352941176	75.59863169897378	23	0.9565217391304348	79.34782608695652	11	1	79.20475319926874	45	0.8666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008332	Chromosome_2A	837	1	66	67.26403823178016	0.6973943341917891	66.50366748166259	29	0.9655172413793104	66.50366748166259	29	0.9655172413793104	NA	NA	NA	62.225705329153605	48	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008333	Chromosome_2A	177	1	8	64.97175141242938	0.44029850746268656	56.86274509803921	4	0.75	56.86274509803921	4	0.75	NA	NA	NA	68.32844574780059	52	0.9807692307692307	NA	NA	NA	NA	no Swiss-Prot hit
GN008334	Chromosome_2A	27086	5	503	35.793398803810085	0.5802931344836243	85.4308759860032	503	0.9502982107355865	63.23232323232323	8	0.625	85.76157943840852	495	0.9555555555555556	0.6637168141592921	37	0	methylated (>=50%)	B3RTL9	Ubiquitin-fold modifier-conjugating enzyme 1 (Ufm1-conjugating enzyme 1)	protein ufmylation [GO:0071569]; response to endoplasmic reticulum stress [GO:0034976]; reticulophagy [GO:0061709]	hit with GO BP
GN008335	Chromosome_2A	492	1	17	49.1869918699187	0.5760330578512397	88.47457627118644	15	1	88.47457627118644	15	1	NA	NA	NA	89.54758190327613	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008336	Chromosome_2A	408	1	19	40.931372549019606	1.1373239436619718	NA	0	NA	NA	NA	NA	NA	NA	NA	12.059369202226344	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008337	Chromosome_2A	318	1	3	46.540880503144656	0.17815126050420169	93.65079365079364	3	1	93.65079365079364	3	1	NA	NA	NA	95.7379636937648	25	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008338	Chromosome_2A	7454	3	206	36.65146230211967	0.8230746759076862	0.6484263798829669	204	0	0.5266484095218033	62	0	0.7216103304215723	142	0	0.43256997455470736	55	0	unmethylated (<10%)	Q09324	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase (EC 2.4.1.102) (Core 2 beta-1,6-N-acetylglucosaminyltransferase) (C2GlcNAcT) (Core 2-branching enzyme) (Core2-GlcNAc-transferase) (C2GNT) (Leukocyte type core 2 beta-1,6-N-acetylglucosaminyltransferase) (C2GnT-L)	cell adhesion molecule production [GO:0060352]; glycoprotein biosynthetic process [GO:0009101]; kidney morphogenesis [GO:0060993]; leukocyte tethering or rolling [GO:0050901]; positive regulation of leukocyte tethering or rolling [GO:1903238]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]; tissue morphogenesis [GO:0048729]	hit with GO BP
GN008339	Chromosome_2A	7415	7	250	39.527983816588	0.8634188919546826	1.595451032350668	245	0	0.5091649694501018	49	0	1.896235725363034	196	0	0.6160164271047228	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008340	Chromosome_2A	3263	5	43	38.30830524057615	0.36242070134110305	40.81858407079646	43	0.5348837209302325	47.939444911690494	32	0.59375	27.140549273021	11	0.36363636363636365	0.4160887656033287	42	0	sparse (10-50%)	P51687	Sulfite oxidase, mitochondrial (HSO) (EC 1.8.3.1) (Nitrite reductase, mitochondrial) (EC 1.7.-.-)	sulfur compound metabolic process [GO:0006790]	hit with GO BP
GN008341	Chromosome_2A	11074	8	242	33.72765035217627	0.7684213846396467	2.740351678465403	241	0.004149377593360996	0.8588498879761016	46	0	3.2221053638015107	195	0.005128205128205128	0.7621951219512195	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008342	Chromosome_2A	797	2	27	38.26850690087829	0.9261060423480806	0.49261083743842365	27	0	0.5208333333333334	26	0	0	1	0	0.9571788413098237	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008343	Chromosome_2A	10517	10	292	35.1145764001141	0.9018613037936766	0.4820333041191937	292	0	0.3179650238473768	81	0	0.5574849204898557	211	0	0.583864118895966	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008344	Chromosome_2A	3314	4	116	39.86119493059746	0.881872278731321	0.58435438265787	116	0	0.7589556769884639	80	0	0.29835902536051717	36	0	0.8411214953271028	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008345	Chromosome_2A	3453	3	85	36.142484795829716	0.7654382483107183	0.6623978803267829	85	0	0.8944543828264758	38	0	0.5863383172090296	47	0	1.0452961672473868	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008346	Chromosome_2A	484	2	25	48.553719008264466	0.8783391405342624	1.70316301703163	25	0	1.4272970561998215	23	0	4.464285714285714	2	0	1.0250102501025011	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008347	Chromosome_2A	21323	9	328	34.78403601744595	0.5389204798511168	79.1989606200439	322	0.9906832298136646	91.44821658788139	55	1	77.77333199959988	267	0.9887640449438202	90.92609915809167	19	1	methylated (>=50%)	Q8VCK5	Kelch-like protein 20 (Kelch-like ECT2-interacting protein)	Golgi to endosome transport [GO:0006895]; negative regulation of apoptotic process [GO:0043066]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K33-linked ubiquitination [GO:1990390]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008348	Chromosome_2A	6287	5	114	33.40225862891681	0.6504831987685874	80.64108455882354	114	0.8596491228070176	27.02078521939954	16	0.375	86.56545036999235	98	0.9387755102040817	26.6015625	33	0.30303030303030304	methylated (>=50%)	Q5TZF3	Ankyrin repeat domain-containing protein 45	cell population proliferation [GO:0008283]	hit with GO BP
GN008349	Chromosome_2A	4690	6	67	34.58422174840085	0.4849827139152982	56.29887054735013	67	0.5970149253731343	53.86631716906946	13	0.6153846153846154	56.78208799791721	54	0.5925925925925926	38.04951995957554	39	0.41025641025641024	methylated (>=50%)	Q6P4H8	ATP synthase subunit C lysine N-methyltransferase (EC 2.1.1.-) (Protein N-lysine methyltransferase FAM173B) (hFAM173B)	peptidyl-lysine trimethylation [GO:0018023]; positive regulation of proton-transporting ATP synthase activity, rotational mechanism [GO:1905273]; positive regulation of sensory perception of pain [GO:1904058]; regulation of mitochondrial ATP synthesis coupled proton transport [GO:1905706]	hit with GO BP
GN008350	Chromosome_2A	5697	4	87	34.38651922064244	0.5173609153937208	92.73869785302846	84	1	94.19795221843003	5	1	92.66004415011038	79	1	96.28666914222057	34	1	methylated (>=50%)	P41105	Large ribosomal subunit protein eL28 (60S ribosomal protein L28)	cytoplasmic translation [GO:0002181]; negative regulation of myoblast fusion [GO:1901740]; spermatogenesis [GO:0007283]; striated muscle contraction [GO:0006941]; translation at postsynapse [GO:0140242]; translation at presynapse [GO:0140236]	hit with GO BP
GN008351	Chromosome_2A	543	1	9	40.88397790055249	0.401330376940133	0	9	0	0	9	0	NA	NA	NA	9.955423476968797	49	0.04081632653061224	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008352	Chromosome_2A	1464	5	37	34.69945355191257	0.8514839034205232	0.4576659038901602	37	0	0.5649717514124294	28	0	0.16891891891891891	9	0	2.598652550529355	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008353	Chromosome_2A	408	1	7	37.009803921568626	0.5151515151515151	1.2411347517730495	7	0	1.2411347517730495	7	0	NA	NA	NA	1.676623626903064	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008354	Chromosome_2A	1353	1	33	38.654841093865485	0.6619373776908023	3.1105000859254166	33	0	3.1105000859254166	33	0	NA	NA	NA	9.128029504741834	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008355	Chromosome_2A	3282	4	68	34.308348567946375	0.7040963125615204	0.6582278481012658	67	0	0.7011393514461	24	0	0.6407974368102528	43	0	1.847903340440654	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008356	Chromosome_2A	28378	32	450	37.87793361054338	0.44271374117916246	77.09994869642274	450	0.8755555555555555	85.47686965149448	233	0.9484978540772532	72.05112871879204	217	0.7972350230414746	13.050993949870355	20	0.1	methylated (>=50%)	Q14517	Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]	anatomical structure morphogenesis [GO:0009653]; cell adhesion [GO:0007155]; cell migration [GO:0016477]; cell-cell adhesion mediated by cadherin [GO:0044331]; cell-cell signaling [GO:0007267]; cellular response to angiotensin [GO:1904385]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]	hit with GO BP
GN008357	Chromosome_2A	7241	5	121	37.01146250517884	0.5046824310624494	82.28896103896103	121	0.9008264462809917	90	23	0.9565217391304348	80.86538461538461	98	0.8877551020408163	76.92771084337349	53	0.6792452830188679	methylated (>=50%)	P02350	Small ribosomal subunit protein uS3A (EC 4.2.99.18) (40S ribosomal protein S3) (S1A)	positive regulation of apoptotic signaling pathway [GO:2001235]; translation [GO:0006412]	hit with GO BP
GN008358	Chromosome_2A	10884	6	183	36.56743844174936	0.5042848867355867	88.6117136659436	170	0.9647058823529412	95.50706033376123	16	1	88.13241723922549	154	0.961038961038961	88.62275449101796	11	1	methylated (>=50%)	P43234	Cathepsin O (EC 3.4.22.42)	proteolysis [GO:0006508]	hit with GO BP
GN008359	Chromosome_2A	234	1	8	44.87179487179487	0.9113924050632911	90.39451114922814	8	1	90.39451114922814	8	1	NA	NA	NA	72.83018867924528	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008360	Chromosome_2A	336	1	31	60.714285714285715	1.118196457326892	0	8	0	0	8	0	NA	NA	NA	0.5267778753292361	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008361	Chromosome_2A	19919	14	292	37.37637431597972	0.4205029481161062	82.3380992430614	243	0.9012345679012346	71.91697191697192	31	0.8064516129032258	83.57334105217454	212	0.9150943396226415	0.4680708793045804	52	0	methylated (>=50%)	Q6NZQ2	ATP-dependent DNA helicase DDX31 (EC 5.6.2.-) (DEAD box protein 31) (Probable ATP-dependent RNA helicase DDX31) (EC 3.6.4.13)	ribosome biogenesis [GO:0042254]	hit with GO BP
GN008362	Chromosome_2A	555	1	11	43.24324324324324	0.4416232638888889	74.80680061823803	11	0.8181818181818182	74.80680061823803	11	0.8181818181818182	NA	NA	NA	21.787180296810863	46	0.2391304347826087	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008363	Chromosome_2A	1432	3	1	49.720670391061454	0.021156204293291177	56.25	1	1	56.25	1	1	NA	NA	NA	52.459016393442624	5	0.4	NA	NA	NA	NA	no Swiss-Prot hit
GN008364	Chromosome_2A	6417	8	66	36.029297179367305	0.3215772029931322	85.04672897196262	66	0.9242424242424242	83.23281061519903	30	0.9	86.41750227894256	36	0.9444444444444444	0.7953723788864787	35	0	methylated (>=50%)	Q9V6X7	GDP-fucose protein O-fucosyltransferase 1 (EC 2.4.1.221) (Neurotic protein) (Peptide-O-fucosyltransferase 1) (O-FucT-1)	cell fate commitment [GO:0045165]; Notch signaling pathway [GO:0007219]; positive regulation of endocytosis [GO:0045807]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of protein localization to cell surface [GO:2000010]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN008365	Chromosome_2A	37334	31	323	35.900251781218195	0.27060548901643783	86.90483758184476	279	0.942652329749104	92.83511269276394	92	1	84.73428273706148	187	0.9144385026737968	65	9	0.8888888888888888	methylated (>=50%)	Q9NRR4	Ribonuclease 3 (EC 3.1.26.3) (Protein Drosha) (Ribonuclease III) (RNase III) (p241)	defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; positive regulation of gene expression [GO:0010628]; pre-miRNA processing [GO:0031054]; primary miRNA processing [GO:0031053]; rRNA processing [GO:0006364]	hit with GO BP
GN008366	Chromosome_2A	4928	6	81	34.76055194805195	0.5451178543140415	79.73533478174996	81	0.8888888888888888	78.41788478073947	18	0.8333333333333334	80.12820512820512	63	0.9047619047619048	61	32	0.625	methylated (>=50%)	Q03442	Crystallin J1A	NA	hit, no GO BP
GN008367	Chromosome_2A	1251	1	28	39.80815347721823	0.5656976744186046	61.97260273972603	28	0.5714285714285714	61.97260273972603	28	0.5714285714285714	NA	NA	NA	35.922330097087375	28	0.25	methylated (>=50%)	Q9M622	Receptor homology region, transmembrane domain- and RING domain-containing protein 1 (AtRMR1) (ReMembR-H2 protein JR700)	intracellular protein transport [GO:0006886]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN008368	Chromosome_2A	3439	4	109	35.82436754870602	0.9891258457089178	1.1972065181243765	109	0	1.2610340479192939	35	0	1.1743450767841013	74	0	5.872756933115824	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008369	Chromosome_2A	3360	5	95	37.32142857142857	0.8122447421657315	0.939261114589856	95	0	0.8137865007180469	45	0	1.0362694300518134	50	0	0.963000506842372	33	0	unmethylated (<10%)	Q9H8W5	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99)	negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN008370	Chromosome_2A	1821	1	39	39.86820428336079	0.5437360752758148	16	2	0	16	2	0	NA	NA	NA	5.572109654350418	54	0	NA	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN008371	Chromosome_2A	559	2	7	39.71377459749553	0.31851851851851853	12.982456140350877	7	0	12.982456140350877	7	0	NA	NA	NA	5.536332179930795	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008372	Chromosome_2A	3503	5	50	33.114473308592636	0.5323643481538218	60.57471264367816	50	0.64	64.17910447761194	11	0.7272727272727273	59.75747320924986	39	0.6153846153846154	2.8268551236749118	17	0	methylated (>=50%)	Q28FE4	MORN repeat-containing protein 5	NA	hit, no GO BP
GN008373	Chromosome_2A	10236	11	269	37.690504103165296	0.7399966836345967	1.658010387534958	245	0	1.686089759484255	93	0	1.6390700786084629	152	0	0.42171850289931473	52	0	unmethylated (<10%)	Q01240	60 kDa neurofilament protein (NF60)	heterochromatin formation [GO:0031507]; nuclear envelope organization [GO:0006998]; nuclear migration [GO:0007097]; nuclear pore localization [GO:0051664]; protein localization to nuclear envelope [GO:0090435]	hit with GO BP
GN008374	Chromosome_2A	18854	11	515	38.44277076482444	0.7396316242506418	1.8770568398813634	504	0	1.6768784263140921	254	0	2.080432467851585	250	0	0.8528784648187633	40	0	unmethylated (<10%)	Q69ZR9	Protein TASOR (Transgene activation suppressor protein)	anterior/posterior axis specification, embryo [GO:0008595]; constitutive heterochromatin formation [GO:0140719]; mesodermal to mesenchymal transition involved in gastrulation [GO:0060809]; negative regulation of gene expression, epigenetic [GO:0045814]; protein localization to heterochromatin [GO:0097355]; transposable element silencing by heterochromatin formation [GO:0141005]	hit with GO BP
GN008375	Chromosome_2A	4625	4	62	34.87567567567567	0.4431856820500139	72.36884978820463	61	0.6557377049180327	69.05222437137331	14	0.5714285714285714	73.04075235109718	47	0.6808510638297872	0.4963726613211149	39	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008376	Chromosome_2A	14195	7	186	33.58224727016555	0.4647613166609047	80.61599321842328	176	0.8863636363636364	55.1440329218107	16	0.4375	83.18299637117677	160	0.93125	80.76140656785817	66	0.9545454545454546	methylated (>=50%)	A2VDR2	Acyl-CoA-binding domain-containing protein 6	protein myristoylation [GO:0018377]	hit with GO BP
GN008377	Chromosome_2A	21644	8	414	35.7235261504343	0.6001720017575257	89.7840951194045	404	0.9579207920792079	84.72727272727273	15	0.7333333333333333	89.9286308203991	389	0.9665809768637532	0.6856023506366308	44	0	methylated (>=50%)	Q9EQU5	Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template-activating factor I) (TAF-I)	negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neuron apoptotic process [GO:0043524]; nucleosome assembly [GO:0006334]	hit with GO BP
GN008378	Chromosome_2A	4689	3	152	36.72424824056302	0.961462088018821	1.8433765573353673	152	0	1.1653313911143481	37	0	1.9867549668874172	115	0	0.5488474204171241	64	0	unmethylated (<10%)	Q5FVB2	LIM domain transcription factor LMO4.1 (LIM domain only protein 4.1) (LMO-4.1)	mesoderm development [GO:0007498]; negative regulation of neuron differentiation [GO:0045665]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN008379	Chromosome_2A	591	1	0	37.56345177664975	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7189072609633357	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008380	Chromosome_2A	699	1	8	40.05722460658083	0.5021551724137931	1.4492753623188406	8	0	1.4492753623188406	8	0	NA	NA	NA	0.6864006864006864	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008381	Chromosome_2A	3573	4	15	38.11922753988245	0.22154017857142858	1.1904761904761905	11	0	1.1904761904761905	11	0	NA	NA	NA	0.7847533632286996	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008382	Chromosome_2A	681	1	5	38.32599118942731	0.35661918726434855	0	5	0	0	5	0	NA	NA	NA	0	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008383	Chromosome_2A	7581	7	107	34.19074000791452	0.4845707055772701	85.3790878427922	104	0.9615384615384616	93.00341296928327	9	1	84.66228140542275	95	0.9578947368421052	94.01056958308867	19	1	methylated (>=50%)	Q5ZKU5	Ras-related protein Rab-14 (EC 3.6.5.2)	defense response to bacterium [GO:0042742]; endocytic recycling [GO:0032456]; fibroblast growth factor receptor signaling pathway [GO:0008543]; Golgi to endosome transport [GO:0006895]; phagolysosome assembly [GO:0001845]; regulation of embryonic development [GO:0045995]	hit with GO BP
GN008384	Chromosome_2A	7137	7	61	33.76768950539442	0.29983491610473634	73.04718741668889	61	0.8524590163934426	74.4106090373281	40	0.85	71.42857142857143	21	0.8571428571428571	37.31665228645384	50	0.36	methylated (>=50%)	Q2YDN4	Tektin-like protein 1 (Coiled-coil domain-containing protein 105)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN008385	Chromosome_2A	2586	1	52	40.75792730085073	0.48597603946441154	73.8556338028169	52	0.75	73.8556338028169	52	0.75	NA	NA	NA	14.396067415730338	28	0.10714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008386	Chromosome_2A	168	1	3	45.23809523809524	0.35	81.13207547169812	3	1	81.13207547169812	3	1	NA	NA	NA	80.685174246899	25	0.88	NA	NA	NA	NA	no Swiss-Prot hit
GN008387	Chromosome_2A	5729	8	94	37.72037004712865	0.4617427912440302	92.0371599203716	88	0.9886363636363636	95.01718213058419	26	1	91.00387250521298	62	0.9838709677419355	86.95652173913044	9	1	methylated (>=50%)	P21675	Transcription initiation factor TFIID subunit 1 (EC 2.3.1.48) (EC 2.7.11.1) (Cell cycle gene 1 protein) (TBP-associated factor 250 kDa) (p250) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250)	cellular response to ATP [GO:0071318]; cellular response to UV [GO:0034644]; DNA damage response [GO:0006974]; midbrain development [GO:0030901]; mRNA transcription by RNA polymerase II [GO:0042789]; negative regulation of gene expression [GO:0010629]; negative regulation of protein autoubiquitination [GO:1905524]; negative regulation of signal transduction by p53 class mediator [GO:1901797]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; positive regulation of androgen receptor signaling pathway [GO:0160207]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; protein autophosphorylation [GO:0046777]; protein polyubiquitination [GO:0000209]; protein stabilization [GO:0050821]; regulation of cell cycle G1/S phase transition [GO:1902806]; regulation of signal transduction by p53 class mediator [GO:1901796]; RNA polymerase II preinitiation complex assembly [GO:0051123]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase I promoter [GO:0006361]; transcription initiation at RNA polymerase II promoter [GO:0006367]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN008388	Chromosome_2A	19023	29	225	35.79876991010882	0.371943679948945	91.0206438573697	225	0.9955555555555555	92.3543280565847	64	1	90.65686724850713	161	0.9937888198757764	48.78913171884229	25	0.56	methylated (>=50%)	Q60544	Transcription initiation factor TFIID subunit 1 (EC 2.3.1.48) (EC 2.7.11.1) (Cell cycle gene 1 protein) (TBP-associated factor 250 kDa) (p250) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250)	positive regulation of transcription by RNA polymerase II [GO:0045944]; RNA polymerase II preinitiation complex assembly [GO:0051123]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN008389	Chromosome_2A	5611	7	151	36.82053109962573	0.7986638990694237	4.478130062485536	150	0	4.571571321508868	71	0	4.397499461090752	79	0	2.4914509037616024	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008390	Chromosome_2A	8429	10	146	35.35413453553209	0.5563900120217794	87.0138219222115	145	0.9862068965517241	89.57675300063171	28	1	86.49032258064516	117	0.9829059829059829	89.19831223628692	50	1	methylated (>=50%)	Q91642	Alpha-aspartyl dipeptidase (EC 3.4.13.21) (Asp-specific dipeptidase) (Dipeptidase E)	proteolysis [GO:0006508]	hit with GO BP
GN008391	Chromosome_2A	3713	3	75	38.86345273363857	0.5382511548794866	91.04797641383007	75	0.8933333333333333	91.7276720351391	58	0.8620689655172413	89.1891891891892	17	1	47.66125061546037	41	0.4634146341463415	methylated (>=50%)	Q8BRG6	Kelch-like protein 24 (Kainate receptor-interacting protein for GluR6) (KRIP6)	intermediate filament organization [GO:0045109]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008392	Chromosome_2A	3425	3	41	37.10948905109489	0.3489218643621383	81.62665360117589	41	0.9024390243902439	89.62336664104535	32	0.9375	67.56756756756756	9	0.7777777777777778	8.908238446081715	23	0	methylated (>=50%)	Q8BRG6	Kelch-like protein 24 (Kainate receptor-interacting protein for GluR6) (KRIP6)	intermediate filament organization [GO:0045109]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008393	Chromosome_2A	53508	29	577	36.23944083127756	0.3379253384166056	80.03883495145631	529	0.9130434782608695	88.88063397721645	87	0.9885057471264368	78.92352867674622	442	0.8981900452488688	81.34369794558579	27	0.8888888888888888	methylated (>=50%)	E9Q236	ATP-binding cassette sub-family C member 4 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (Multidrug resistance-associated protein 4)	bile acid and bile salt transport [GO:0015721]; cAMP transport [GO:0070730]; cilium assembly [GO:0060271]; export across plasma membrane [GO:0140115]; kynurenic acid metabolic process [GO:0034275]; L-tryptophan metabolic process [GO:0006568]; leukotriene transport [GO:0071716]; positive regulation of smooth muscle cell proliferation [GO:0048661]; prostaglandin secretion [GO:0032310]; prostaglandin transport [GO:0015732]; urate transport [GO:0015747]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN008394	Chromosome_2A	30271	17	427	34.544613656635065	0.47538250998339837	86.18574366004113	422	0.9502369668246445	85.79520697167756	44	0.9545454545454546	86.21908127208481	378	0.9497354497354498	2.841918294849023	39	0	methylated (>=50%)	P61763	Syntaxin-binding protein 1 (N-Sec1) (Protein unc-18 homolog 1) (Unc18-1) (Protein unc-18 homolog A) (Unc-18A) (p67)	axon target recognition [GO:0007412]; presynaptic dense core vesicle exocytosis [GO:0099525]; regulation of regulated secretory pathway [GO:1903305]; synaptic vesicle maturation [GO:0016188]; vesicle docking involved in exocytosis [GO:0006904]	hit with GO BP
GN008395	Chromosome_2A	11516	5	168	36.8357068426537	0.4324603676125925	42.46330567964263	168	0.3869047619047619	67.07083599234205	45	0.8	36.311423101467774	123	0.23577235772357724	14.681892332789559	21	0.09523809523809523	sparse (10-50%)	Q60980	Krueppel-like factor 3 (Basic krueppel-like factor) (CACCC-box-binding protein BKLF) (TEF-2)	cellular response to endothelin [GO:1990859]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008396	Chromosome_2A	37388	21	436	34.644805820049214	0.39043767370237636	81.41832209683815	428	0.8691588785046729	84.2791911285062	57	0.8947368421052632	81.06278626727737	371	0.8652291105121294	0.7821901323706378	30	0	methylated (>=50%)	O94868	F-BAR and double SH3 domains protein 2 (Carom) (Protein nervous wreck 1) (NWK1) (SH3 multiple domains protein 3)	clathrin-dependent endocytosis [GO:0072583]; membrane organization [GO:0061024]; neuromuscular synaptic transmission [GO:0007274]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of Arp2/3 complex-mediated actin nucleation [GO:2000601]; regulation of actin filament polymerization [GO:0030833]	hit with GO BP
GN008397	Chromosome_2A	16104	15	204	37.37580725285643	0.36640052606525764	92.26666666666667	173	0.9826589595375722	96.34464751958224	72	1	89.62837837837837	101	0.9702970297029703	95.16129032258064	44	1	methylated (>=50%)	Q6GQJ2	Protein Jade-1 (Jade family PHD finger protein 1) (PHD finger protein 17)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008398	Chromosome_2A	23741	15	412	36.59492018027884	0.5214433372315581	87.72895098819953	412	0.9587378640776699	93.94904458598727	43	0.9767441860465116	87.10679302381142	369	0.9566395663956639	0.4996668887408394	75	0	methylated (>=50%)	P0DPU3	Scoloptoxin SSD14 (SLPTX-SSD14) (Toxin-SSD14) [Cleaved into: SLPTX-SSD14 subunit alpha; SLPTX-SSD14 subunit beta]	glutathione catabolic process [GO:0006751]	hit with GO BP
GN008399	Chromosome_2A	3451	6	27	36.047522457258765	0.2476300578034682	82.7917282127031	27	1	83.02354399008674	16	1	82.44972577696527	11	1	84.61538461538461	7	1	methylated (>=50%)	Q8IUR5	Protein O-mannosyl-transferase TMTC1 (EC 2.4.1.109) (Transmembrane O-mannosyltransferase targeting cadherins 1) (Transmembrane and tetratricopeptide repeat-containing 1)	protein O-linked glycosylation via mannose [GO:0035269]; RNA processing [GO:0006396]	hit with GO BP
GN008400	Chromosome_2A	4430	5	39	34.762979683972915	0.2936212953190882	85.86080586080585	39	0.9487179487179487	77.99097065462755	13	0.8461538461538461	89.64208242950109	26	1	37.31406714832129	29	0.41379310344827586	methylated (>=50%)	Q96IZ5	RNA-binding protein 41 (RNA-binding motif protein 41)	NA	hit, no GO BP
GN008401	Chromosome_2A	6888	13	213	39.43089430894309	0.7965556556958726	2.211030585923105	212	0	0.46419098143236076	125	0	4.395908211224772	87	0	0.5494505494505495	63	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN008402	Chromosome_2A	23323	8	394	34.78540496505595	0.5593061903795018	58.486377396569125	381	0.5590551181102362	64.9584487534626	14	0.7142857142857143	58.29210493493535	367	0.553133514986376	5.997693194925029	41	0	methylated (>=50%)	O01391	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) (Ubiquitin thioesterase)	protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN008403	Chromosome_2A	870	3	27	38.96551724137931	0.8196664107753507	1.3157894736842106	27	0	1.1074197120708749	21	0	1.7994858611825193	6	0	1.5807560137457044	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008404	Chromosome_2A	52241	54	698	35.25774774602324	0.4338569497568719	89.9108782910402	684	0.9868421052631579	93.68867082961641	166	0.9939759036144579	88.94645449628511	518	0.9845559845559846	0.5605381165919282	54	0	methylated (>=50%)	O75165	DnaJ homolog subfamily C member 13 (Required for receptor-mediated endocytosis 8) (RME-8)	endosome organization [GO:0007032]; osteoblast differentiation [GO:0001649]; receptor-mediated endocytosis [GO:0006898]; regulation of early endosome to late endosome transport [GO:2000641]; regulation of endocytic recycling [GO:2001135]	hit with GO BP
GN008405	Chromosome_2A	5857	7	182	38.671674918900464	0.8311688109161793	0.6480304955527318	182	0	0.7263922518159807	93	0	0.6025306286402892	89	0	0.5052099778970635	49	0	unmethylated (<10%)	H2A0L8	Fibronectin type III domain-containing protein 2	NA	hit, no GO BP
GN008406	Chromosome_2A	10611	7	292	36.443313542550186	0.8302772403517892	0.9793707022296312	292	0	1.5889287544848796	63	0	0.8838180941668006	229	0	0.5311614730878187	59	0	unmethylated (<10%)	H2A0L8	Fibronectin type III domain-containing protein 2	NA	hit, no GO BP
GN008407	Chromosome_2A	740	2	10	35.54054054054054	0.4332045427935839	0.7792207792207793	10	0	1.0416666666666667	6	0	0.5181347150259067	4	0	0.7667473769168685	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008408	Chromosome_2A	25093	4	634	34.87028254891803	0.8317367755157523	0.5577342047930284	630	0	0.6662965019433648	54	0	0.5517410495340853	576	0	0.9000900090009001	55	0	unmethylated (<10%)	Q9P7I3	Mitochondrial division protein 1	mitochondrial fission [GO:0000266]; mitochondrial membrane fission [GO:0090149]; peroxisome fission [GO:0016559]	hit with GO BP
GN008409	Chromosome_2A	294	1	0	52.04081632653061	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5312084993359893	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008410	Chromosome_2A	5175	1	175	39.38164251207729	0.893375041431886	0.2092925910422771	175	0	0.2092925910422771	175	0	NA	NA	NA	0.6693830034924331	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008411	Chromosome_2A	1158	1	48	39.810017271157164	1.046779661016949	0.4056795131845842	48	0	0.4056795131845842	48	0	NA	NA	NA	3.452855245683931	34	0.029411764705882353	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008412	Chromosome_2A	1344	1	50	39.657738095238095	0.9462123345536468	0.7650273224043715	50	0	0.7650273224043715	50	0	NA	NA	NA	0.5115658362989324	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008413	Chromosome_2A	11012	3	113	34.28986560116237	0.3525512278390458	59.0507535077083	113	0.6814159292035398	47.84688995215311	21	0.5238095238095238	60.41585697629227	92	0.717391304347826	0.9726443768996961	39	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008414	Chromosome_2A	2163	4	9	31.76144244105409	0.166975451597962	74.33460076045627	9	1	74.79452054794521	6	1	73.2919254658385	3	1	86.33132859486058	25	1	methylated (>=50%)	Q9UI14	Prenylated Rab acceptor protein 1 (PRA1 family protein 1)	NA	hit, no GO BP
GN008415	Chromosome_2A	396	1	21	44.94949494949495	1.0607142857142857	2.2099447513812156	21	0	2.2099447513812156	21	0	NA	NA	NA	0.8203125	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008416	Chromosome_2A	2823	3	67	32.235210768685796	0.9137731956770649	2.0288724151385096	67	0	0.8284023668639053	18	0	2.2658257416491474	49	0	1.590713671539123	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008417	Chromosome_2A	1015	3	47	51.330049261083744	0.7039250405784271	0.5594405594405595	42	0	0.3389830508474576	34	0	1.6	8	0	0.87527352297593	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008418	Chromosome_2A	422	2	32	54.976303317535546	1.0375720322704571	1.0767160161507403	32	0	1.0355029585798816	30	0	1.492537313432836	2	0	0.5633802816901409	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008419	Chromosome_2A	9210	2	292	38.099891422366994	0.8744294449643214	0.7821637426900585	291	0	0.43931905546403077	51	0	0.8348090058183658	240	0	1.825372680255552	55	0	unmethylated (<10%)	Q75W84	Annetocin receptor	cellular response to hormone stimulus [GO:0032870]; egg-laying behavior [GO:0018991]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN008420	Chromosome_2A	300	1	8	44.333333333333336	0.5434782608695652	79.92424242424242	8	0.875	79.92424242424242	8	0.875	NA	NA	NA	90.56603773584905	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008421	Chromosome_2A	1337	2	16	44.3530291697831	0.2440894568690096	0.47393364928909953	16	0	0.5128205128205128	15	0	0	1	0	0.4793863854266539	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008422	Chromosome_2A	17796	9	442	37.81186783546865	0.6953621202544235	1.948085862014937	402	0	1.3071895424836601	59	0	2.0420384454158933	343	0	0.673551863493489	53	0	unmethylated (<10%)	Q9H4G4	Golgi-associated plant pathogenesis-related protein 1 (GAPR-1) (Golgi-associated PR-1 protein) (Glioma pathogenesis-related protein 2) (GliPR 2)	positive regulation of epithelial cell migration [GO:0010634]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]	hit with GO BP
GN008423	Chromosome_2A	5603	8	168	37.78333035873639	0.8404184843068385	0.7095445181963836	168	0	0.8944543828264758	34	0	0.6656280980031157	134	0	0.8371703641691084	51	0	unmethylated (<10%)	P50164	Tropinone reductase 2 (EC 1.1.1.236) (Tropinone reductase II) (TR-II)	tropane alkaloid biosynthetic process [GO:0009710]	hit with GO BP
GN008424	Chromosome_2A	198	1	10	52.02020202020202	0.8016194331983806	0.333889816360601	10	0	0.333889816360601	10	0	NA	NA	NA	1.1514790549930514	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008425	Chromosome_2A	19429	11	594	36.51242987287045	0.9188421125040843	2.420967790083286	594	0	0.6404098623118796	74	0	2.604029496971293	520	0	0.5147058823529411	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008426	Chromosome_2A	2911	4	83	35.48608725523875	0.907412136735445	1.9715224534501643	83	0	1.7558528428093645	21	0	2.0317608594114898	62	0	0.6525285481239804	66	0	unmethylated (<10%)	P96576	Uncharacterized methyltransferase YdaC (EC 2.1.1.-)	NA	hit, no GO BP
GN008427	Chromosome_2A	11472	7	169	34.33577405857741	0.4999401753481176	81.07568129145689	167	0.9221556886227545	82.08744710860367	12	0.9166666666666666	81.01491019993223	155	0.9225806451612903	0.748544496811755	50	0	methylated (>=50%)	Q6GQA6	COP9 signalosome complex subunit 8 (Signalosome subunit 8)	COP9 signalosome assembly [GO:0010387]; protein deneddylation [GO:0000338]	hit with GO BP
GN008428	Chromosome_2A	34386	10	550	36.44215669167684	0.48836462368812833	85.11494541978973	362	0.9530386740331491	82.34597156398104	33	0.8787878787878788	85.37188719696553	329	0.9604863221884499	55.803722504230116	49	0.5306122448979592	methylated (>=50%)	Q3SZK1	Angio-associated migratory cell protein	positive regulation of angiogenesis [GO:0045766]; positive regulation of endothelial cell migration [GO:0010595]; smooth muscle cell migration [GO:0014909]	hit with GO BP
GN008429	Chromosome_2A	14942	19	163	34.74099852764021	0.3631236723238641	83.1826923076923	162	0.9629629629629629	80.14416775884666	55	0.9636363636363636	84.44474686989658	107	0.9626168224299065	0.7761338830948339	62	0	methylated (>=50%)	Q9WV04	Kinesin-like protein KIF9	extracellular matrix disassembly [GO:0022617]; microtubule-based movement [GO:0007018]; organelle disassembly [GO:1903008]; regulation of flagellated sperm motility [GO:1901317]; regulation of podosome assembly [GO:0071801]	hit with GO BP
GN008430	Chromosome_2A	40596	11	564	36.78933885111834	0.41188078630310715	79.41617069516984	455	0.8769230769230769	92.34303215926494	45	1	78.30255057167986	410	0.8634146341463415	50.17768301350391	22	0.4090909090909091	methylated (>=50%)	Q9MZL5	Voltage-dependent L-type calcium channel subunit beta-2 (CAB2) (Calcium channel voltage-dependent subunit beta 2)	calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; chemical synaptic transmission [GO:0007268]; positive regulation of muscle contraction [GO:0045933]	hit with GO BP
GN008431	Chromosome_2A	17635	12	265	33.456195066628865	0.5407334125930361	82.64128316594214	261	0.9195402298850575	70.27824620573355	35	0.7142857142857143	84.30361090641121	226	0.9513274336283186	24.224862358736598	39	0.23076923076923078	methylated (>=50%)	O14733	Dual specificity mitogen-activated protein kinase kinase 7 (MAP kinase kinase 7) (MAPKK 7) (EC 2.7.12.2) (JNK-activating kinase 2) (MAPK/ERK kinase 7) (MEK 7) (Stress-activated protein kinase kinase 4) (SAPK kinase 4) (SAPKK-4) (SAPKK4) (c-Jun N-terminal kinase kinase 2) (JNK kinase 2) (JNKK 2)	cellular senescence [GO:0090398]; Fc-epsilon receptor signaling pathway [GO:0038095]; JNK cascade [GO:0007254]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of telomere maintenance [GO:0032206]; response to heat [GO:0009408]; response to osmotic stress [GO:0006970]; response to tumor necrosis factor [GO:0034612]; response to UV [GO:0009411]; signal transduction [GO:0007165]; stress-activated MAPK cascade [GO:0051403]	hit with GO BP
GN008432	Chromosome_2A	19104	13	319	35.48994974874372	0.5358424172882004	90.64633884474983	317	0.9747634069400631	93.75523889354568	45	0.9777777777777777	90.29140150246424	272	0.9742647058823529	95.84352078239608	30	1	methylated (>=50%)	A6H751	Folylpolyglutamate synthase, mitochondrial (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase)	NA	hit, no GO BP
GN008433	Chromosome_2A	12069	8	161	36.09246830723341	0.4118428158549106	94.58591910977958	161	0.9937888198757764	96.13069647463456	21	1	94.36636930221191	140	0.9928571428571429	94.54197255027131	45	1	methylated (>=50%)	P49366	Deoxyhypusine synthase (DHS) (EC 2.5.1.46)	peptidyl-hypusine biosynthetic process [GO:0008612]; positive regulation of cell population proliferation [GO:0008284]; protein maturation [GO:0051604]; spermidine catabolic process [GO:0046203]; spermidine metabolic process [GO:0008216]; translation [GO:0006412]	hit with GO BP
GN008434	Chromosome_2A	14245	14	446	38.53281853281853	0.8435906301552045	0.8210601939754708	424	0	0.49261083743842365	136	0	0.9187138006790493	288	0	1.7025712300208478	48	0	unmethylated (<10%)	Q9QX15	Calcium-activated chloride channel regulator 3A-1 (EC 3.4.-.-)	chloride transport [GO:0006821]	hit with GO BP
GN008435	Chromosome_2A	7095	7	196	36.560958421423535	0.8267593651178677	0.9882326059636696	139	0	1.067724222086638	21	0	0.9699184706213101	118	0	0.3787878787878788	42	0	unmethylated (<10%)	Q60431	Caspase-3 (CASP-3) (EC 3.4.22.56) (Apopain) (Cysteine protease CPP32) (CPP-32) (Protein Yama) (SREBP cleavage activity 1) (SCA-1) [Cleaved into: Caspase-3 subunit p17; Caspase-3 subunit p12]	apoptotic process [GO:0006915]; erythrocyte differentiation [GO:0030218]; keratinocyte differentiation [GO:0030216]; neuron differentiation [GO:0030182]; positive regulation of amyloid-beta formation [GO:1902004]; positive regulation of neuron apoptotic process [GO:0043525]; proteolysis [GO:0006508]; regulation of protein stability [GO:0031647]; synapse pruning [GO:0098883]	hit with GO BP
GN008436	Chromosome_2A	1346	2	21	42.4962852897474	0.3669241253975466	2.9673590504451037	21	0	2.9673590504451037	21	0	NA	NA	NA	0.9609949123798757	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008437	Chromosome_2A	3223	3	104	37.57368910952529	0.9187772734249939	0.5895978100652769	104	0	0.6034699522252954	92	0	0.5181347150259067	12	0	0.6809669731018045	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008438	Chromosome_2A	408	1	3	49.754901960784316	0.12164579606440072	1.5873015873015872	3	0	1.5873015873015872	3	0	NA	NA	NA	0.7223476297968398	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008439	Chromosome_2A	273	1	17	51.64835164835165	0.9341787439613527	0.2994011976047904	17	0	0.2994011976047904	17	0	NA	NA	NA	0.688360450563204	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008440	Chromosome_2A	23125	15	264	33.59567567567568	0.40776022816939905	86.84836000633814	260	0.9923076923076923	90.29314159292035	58	0.9827586206896551	86.03512437161324	202	0.995049504950495	87.18209562563581	13	1	methylated (>=50%)	Q9Z0U0	Solute carrier family 53 member 1 (Phosphate exporter SLC53A1) (Protein SYG1 homolog) (Rmc-1) (Xenotropic and polytropic retrovirus receptor 1)	intracellular phosphate ion homeostasis [GO:0030643]; phosphate ion transmembrane transport [GO:0035435]; response to virus [GO:0009615]	hit with GO BP
GN008441	Chromosome_2A	22286	9	329	36.15274163151754	0.4523849922154006	82.87717829295097	327	0.8990825688073395	86.15746180963572	104	0.9326923076923077	81.93752524572506	223	0.8834080717488789	28.794642857142858	36	0.2222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008442	Chromosome_2A	25231	9	355	37.22801315841623	0.40729728820280003	59.182946380856244	341	0.5835777126099707	91.17997616209773	21	1	57.505311836020496	320	0.55625	1.392757660167131	35	0	methylated (>=50%)	P83111	Serine beta-lactamase-like protein LACTB, mitochondrial (EC 3.4.-.-)	proteolysis [GO:0006508]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN008443	Chromosome_2A	357	1	6	45.938375350140056	0.3224446786090622	67.91044776119404	6	0.6666666666666666	67.91044776119404	6	0.6666666666666666	NA	NA	NA	11.514614703277237	46	0.15217391304347827	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008444	Chromosome_2A	5357	6	111	37.502333395557216	0.5926593708886497	89.08204102051026	111	0.9819819819819819	88.99624261943103	35	0.9428571428571428	89.10810370128812	76	1	82.89473684210526	27	0.9259259259259259	methylated (>=50%)	Q80SY5	Pre-mRNA-splicing factor 38B	NA	hit, no GO BP
GN008445	Chromosome_2A	2384	8	80	39.38758389261745	0.8665624659227218	0.5630278385986862	80	0	0.5238649592549476	46	0	0.6085192697768763	34	0	4.1987673343605545	34	0.058823529411764705	unmethylated (<10%)	Q75WF2	Plancitoxin-1 (EC 3.1.22.1) (Plancitoxin I) (Plan-I) [Cleaved into: Plancitoxin-1 subunit alpha; Plancitoxin-1 subunit beta]	apoptotic DNA fragmentation [GO:0006309]	hit with GO BP
GN008446	Chromosome_2A	2243	2	93	41.68524297815426	0.9609580143176981	0.9085009733939	78	0	1.055662188099808	45	0	0.8333333333333334	33	0	0.42325056433408575	65	0	unmethylated (<10%)	Q26065	Actin, adductor muscle (EC 3.6.4.-)	NA	hit, no GO BP
GN008447	Chromosome_2A	11044	11	355	38.52770735240855	0.8666832017819018	1.4906624235826145	348	0	0.6001263423878711	191	0	2.495988589766447	157	0	1.1807447774750226	54	0	unmethylated (<10%)	P80560	Receptor-type tyrosine-protein phosphatase N2 (R-PTP-N2) (EC 3.1.3.-) (EC 3.1.3.48) (PTP IA-2beta) (Phogrin) (Protein tyrosine phosphatase-NP) (PTP-NP) [Cleaved into: IA-2beta71; IA-2beta64; IA-2beta60]	insulin secretion involved in cellular response to glucose stimulus [GO:0035773]; negative regulation of GTPase activity [GO:0034260]; neurotransmitter secretion [GO:0007269]; regulation of secretion [GO:0051046]	hit with GO BP
GN008448	Chromosome_2A	2582	2	41	38.22618125484121	0.44065835261992375	92.88421052631578	41	1	92.90155440414507	35	1	92.80898876404494	6	1	93.18971507991661	18	1	methylated (>=50%)	Q8BY02	NF-kappa-B-repressing factor (NFkB-repressing factor) (Transcription factor NRF)	negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN008449	Chromosome_2A	30156	7	721	35.54848123093248	0.7579605026929982	1.4272095873621136	693	0	0.7802340702210663	12	0	1.4410504645857676	681	0	0.7073803348266918	88	0	unmethylated (<10%)	Q3YLA4	Neuronal calcium sensor 1 (NCS-1)	NA	hit, no GO BP
GN008450	Chromosome_2A	15219	10	428	37.453183520599254	0.801956193710553	3.876365326516384	426	0.002347417840375587	0.4440961337513062	100	0	4.619211850511675	326	0.003067484662576687	0.4490057729313663	56	0	unmethylated (<10%)	Q9UGM3	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Deleted in malignant brain tumors 1 protein) (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)	defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; epithelial cell differentiation [GO:0030855]; induction of bacterial agglutination [GO:0043152]; innate immune response [GO:0045087]	hit with GO BP
GN008451	Chromosome_2A	1281	2	25	35.987509758001565	0.6034027960960169	1.1695906432748537	25	0	1.0676156583629892	13	0	1.2598425196850394	12	0	3.592814371257485	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008452	Chromosome_2A	2223	2	64	35.94242015294647	0.8914956011730205	0.7252007252007252	64	0	0.6900878293601004	35	0	0.7498897220996912	29	0	0.45871559633027525	68	0	unmethylated (<10%)	Q8TDV5	Glucose-dependent insulinotropic receptor (G protein-coupled receptor 119)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]	hit with GO BP
GN008453	Chromosome_2A	1501	2	46	39.1072618254497	0.8019279907084785	0.7843137254901961	46	0	0.8163265306122449	35	0	0.7017543859649122	11	0	2.4475524475524475	48	0	unmethylated (<10%)	Q2KIP6	Kappa-type opioid receptor (K-OR-1) (KOR-1)	adenylate cyclase-inhibiting opioid receptor signaling pathway [GO:0031635]; G protein-coupled opioid receptor signaling pathway [GO:0038003]; locomotory behavior [GO:0007626]; neuropeptide signaling pathway [GO:0007218]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; regulation of saliva secretion [GO:0046877]; sensory perception of pain [GO:0019233]	hit with GO BP
GN008454	Chromosome_2A	918	1	29	42.91938997821351	0.6991071428571428	1.1508951406649617	29	0	1.1508951406649617	29	0	NA	NA	NA	0.8011310084825636	57	0	unmethylated (<10%)	Q58PK6	Peptidylaminoacyl-L/D-isomerase polyprotein (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN008455	Chromosome_2A	3814	4	137	40.63974829575249	0.8706587285321283	0.44758539458186103	136	0	0.35765379113018597	65	0	0.49174569722514927	71	0	4.680038204393505	64	0	unmethylated (<10%)	Q58PK5	Peptidylaminoacyl-L/D-isomerase polyprotein 2 (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN008456	Chromosome_2A	5829	4	190	39.2520157831532	0.8467156521333602	0.8089424915428739	188	0	0.6139154160982264	67	0	0.8625539096193512	121	0	1.0706092276319144	62	0	unmethylated (<10%)	Q58PK6	Peptidylaminoacyl-L/D-isomerase polyprotein (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN008457	Chromosome_2A	3675	4	141	41.034013605442176	0.911915484480674	0.6077707835901889	141	0	0.7304116865869854	57	0	0.5482102547565302	84	0	0.4731182795698925	74	0	unmethylated (<10%)	Q58PK4	Peptidylaminoacyl-L/D-isomerase (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN008458	Chromosome_2A	1233	1	66	45.6609894566099	1.028668941979522	4.484029484029484	66	0	4.484029484029484	66	0	NA	NA	NA	1.6955684007707128	49	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN008459	Chromosome_2A	1583	2	56	40.30322173089071	0.8719961440473731	2.944640753828033	56	0	2.712348322626695	52	0	4.040404040404041	4	0	1.3737373737373737	46	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN002561	Chromosome_2A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN002837	Chromosome_2A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008460	Chromosome_2A	1179	1	57	43.85072094995759	1.0073599952032617	0.6861063464837049	57	0	0.6861063464837049	57	0	NA	NA	NA	1.2905075996558646	73	0	unmethylated (<10%)	O01393	Innexin unc-9 (Uncoordinated protein 9)	monoatomic ion transmembrane transport [GO:0034220]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN008461	Chromosome_2A	37136	8	506	35.67966393795778	0.43512342530773107	81.1780190852254	460	0.941304347826087	89.84406237504999	59	0.9661016949152542	80.40087489691277	401	0.9376558603491272	85.25676421866372	53	0.9622641509433962	methylated (>=50%)	A8MPX8	Protein phosphatase 2C-like domain-containing protein 1	negative regulation of MAPK cascade [GO:0043409]	hit with GO BP
GN008462	Chromosome_2A	4953	9	68	37.855844942459115	0.38705807181175045	71.64879356568365	67	0.8805970149253731	80.81979891724671	35	0.9428571428571428	64.63630987581313	32	0.8125	0.343980343980344	35	0	methylated (>=50%)	Q8CDU5	EF-hand domain-containing family member B (Cilia- and flagella-associated protein 21)	flagellated sperm motility [GO:0030317]; negative regulation of protein binding [GO:0032091]; regulation of calcineurin-NFAT signaling cascade [GO:0070884]; regulation of store-operated calcium entry [GO:2001256]	hit with GO BP
GN008463	Chromosome_2A	5796	5	42	33.95445134575569	0.25377828698196786	92.65321659687856	42	1	84.76190476190476	8	1	94.15496148618034	34	1	10.227780259044216	31	0.12903225806451613	methylated (>=50%)	P51147	Ras-related protein Rab-5C (EC 3.6.5.2)	endocytosis [GO:0006897]; endosomal transport [GO:0016197]; plasma membrane to endosome transport [GO:0048227]	hit with GO BP
GN008464	Chromosome_2A	15856	4	54	32.16448032290616	0.15217961596785443	77.1813927883292	54	0.9074074074074074	91.33858267716535	4	1	76.11719443622374	50	0.9	95.83333333333333	2	1	methylated (>=50%)	Q9BZF3	Oxysterol-binding protein-related protein 6 (ORP-6) (OSBP-related protein 6)	bile acid biosynthetic process [GO:0006699]; intermembrane phospholipid transfer [GO:0120010]; regulation of cholesterol transport [GO:0032374]	hit with GO BP
GN008465	Chromosome_2A	7131	6	109	38.199411022297014	0.41916113737941985	86.1272695222986	109	0.9724770642201835	93.9464493597206	21	1	84.73203157457417	88	0.9659090909090909	96.35647464303298	33	1	methylated (>=50%)	Q5U4Q0	WW domain-containing adapter protein with coiled-coil	chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; mitotic G1 DNA damage checkpoint signaling [GO:0031571]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of TORC1 signaling [GO:1904263]; regulation of autophagy [GO:0010506]	hit with GO BP
GN008466	Chromosome_2A	37214	49	921	37.20642768850433	0.7216563781329243	2.5799991478120075	921	0	3.0778435152562653	348	0	2.3451951716569996	573	0	0.700218818380744	47	0	unmethylated (<10%)	Q91ZU6	Dystonin (Bullous pemphigoid antigen 1) (BPA) (Dystonia musculorum protein) (Hemidesmosomal plaque protein) (Microtubule actin cross-linking factor 2)	axonogenesis [GO:0007409]; cell motility [GO:0048870]; cytoplasmic microtubule organization [GO:0031122]; cytoskeleton organization [GO:0007010]; hemidesmosome assembly [GO:0031581]; intermediate filament cytoskeleton organization [GO:0045104]; intracellular transport [GO:0046907]; maintenance of cell polarity [GO:0030011]; microtubule cytoskeleton organization [GO:0000226]; regulation of microtubule polymerization or depolymerization [GO:0031110]; response to wounding [GO:0009611]; retrograde axonal transport [GO:0008090]; wound healing [GO:0042060]	hit with GO BP
GN008467	Chromosome_2A	153	1	7	34.64052287581699	1.6578947368421053	0.46367851622874806	7	0	0.46367851622874806	7	0	NA	NA	NA	1.730175077239959	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008468	Chromosome_2A	13982	8	143	36.10356172221427	0.3154576332370701	54.7947074069022	143	0.6223776223776224	75.80714593198451	60	0.9166666666666666	45.04792332268371	83	0.40963855421686746	0.6121556624398776	60	0	methylated (>=50%)	G5EDE9	ANK repeat-containing protein nipk-1	positive regulation of cell differentiation [GO:0045597]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008469	Chromosome_2A	958	2	37	51.56576200417537	0.6769671504965623	0.3663003663003663	27	0	0.3816793893129771	25	0	0	2	0	0.2476780185758514	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008470	Chromosome_2A	1363	3	1	49.816581071166546	0.027553165682865692	3.9603960396039604	1	0	3.9603960396039604	1	0	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008471	Chromosome_2A	228	1	0	50.43859649122807	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008472	Chromosome_2A	654	1	32	48.01223241590214	0.8495920107173304	0.3502626970227671	31	0	0.3502626970227671	31	0	NA	NA	NA	1.065054691997697	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008473	Chromosome_2A	914	3	37	43.21663019693654	0.8671282051282051	0.8434864104967198	37	0	0.8324661810613944	34	0	0.9433962264150944	3	0	0.6896551724137931	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008474	Chromosome_2A	2133	1	91	42.287857477730896	0.9543295704845814	0.46439628482972134	91	0	0.46439628482972134	91	0	NA	NA	NA	0.7020623080298376	54	0	unmethylated (<10%)	O08590	Amine oxidase [copper-containing] 3 (EC 1.4.3.21) (Amine oxidase copper-containing 3) (Copper amine oxidase) (Semicarbazide-sensitive amine oxidase) (SSAO) (VP97) (Vascular adhesion protein 1) (VAP-1)	amine metabolic process [GO:0009308]; cell adhesion [GO:0007155]; eating behavior [GO:0042755]; leukocyte migration involved in inflammatory response [GO:0002523]; positive regulation of acute inflammatory response [GO:0002675]; positive regulation of D-glucose transmembrane transport [GO:0010828]; positive regulation of leukocyte migration [GO:0002687]; regulation of blood pressure [GO:0008217]; response to immobilization stress [GO:0035902]	hit with GO BP
GN008475	Chromosome_2A	7309	7	123	40.771651388698864	0.42930983847283405	93.61943319838056	123	1	93.96491228070175	27	1	93.51578947368421	96	1	78.47576530612245	31	0.967741935483871	methylated (>=50%)	Q12933	TNF receptor-associated factor 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF2) (RING-type E3 ubiquitin transferase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)	canonical NF-kappaB signal transduction [GO:0007249]; CD27 signaling pathway [GO:0160162]; CD40 signaling pathway [GO:0023035]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; interleukin-17-mediated signaling pathway [GO:0097400]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; mRNA stabilization [GO:0048255]; negative regulation of glial cell apoptotic process [GO:0034351]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of interleukin-2 production [GO:0032743]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of pyroptotic inflammatory response [GO:0140639]; positive regulation of T cell cytokine production [GO:0002726]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; protein autoubiquitination [GO:0051865]; protein K63-linked ubiquitination [GO:0070534]; protein-containing complex assembly [GO:0065003]; regulation of apoptotic process [GO:0042981]; regulation of JNK cascade [GO:0046328]; regulation of protein-containing complex assembly [GO:0043254]; response to endoplasmic reticulum stress [GO:0034976]; signal transduction [GO:0007165]; T cell activation [GO:0042110]; toll-like receptor signaling pathway [GO:0002224]; TORC1 complex assembly [GO:1905669]; TORC2 complex disassembly [GO:1905670]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN008476	Chromosome_2A	345	1	28	42.89855072463768	1.7692307692307692	5.852842809364549	28	0	5.852842809364549	28	0	NA	NA	NA	8.099401748734468	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008477	Chromosome_2A	8100	6	86	33.76543209876543	0.3725384705065689	61.843711843711844	86	0.7441860465116279	40.91710758377425	9	0.5555555555555556	63.82623224728488	77	0.7662337662337663	80.97014925373135	24	1	methylated (>=50%)	B7Q5K1	Queuine tRNA-ribosyltransferase accessory subunit 2 (Queuine tRNA-ribosyltransferase domain-containing protein 1)	tRNA wobble guanine modification [GO:0002099]	hit with GO BP
GN008478	Chromosome_2A	10870	10	130	37.111315547378105	0.34758503300963234	83.44186046511628	129	0.9224806201550387	78.34036568213783	73	0.863013698630137	87.46533555185802	56	1	39.13803145020385	33	0.6060606060606061	methylated (>=50%)	O94967	WD repeat-containing protein 47 (Neuronal enriched MAP-interacting protein) (Nemitin)	NA	hit, no GO BP
GN008479	Chromosome_2A	42436	24	571	37.496465265340746	0.3828367908546222	59.95467224546722	539	0.6623376623376623	81.9689964645091	65	0.9692307692307692	57.321318195126715	474	0.620253164556962	56.2543192812716	30	0.7333333333333333	methylated (>=50%)	Q4KMQ2	Anoctamin-6 (Small-conductance calcium-activated nonselective cation channel) (SCAN channel) (Transmembrane protein 16F)	activation of blood coagulation via clotting cascade [GO:0002543]; bleb assembly [GO:0032060]; blood coagulation [GO:0007596]; calcium activated phosphatidylcholine scrambling [GO:0061590]; calcium activated phosphatidylserine scrambling [GO:0061589]; calcium ion transmembrane transport [GO:0070588]; chloride transmembrane transport [GO:1902476]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cell volume [GO:0045794]; phosphatidylserine exposure on blood platelet [GO:0097045]; plasma membrane phospholipid scrambling [GO:0017121]; pore complex assembly [GO:0046931]; positive regulation of apoptotic process [GO:0043065]; positive regulation of bone mineralization [GO:0030501]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of monocyte chemotaxis [GO:0090026]; positive regulation of phagocytosis, engulfment [GO:0060100]; positive regulation of potassium ion export across plasma membrane [GO:1903766]; purinergic nucleotide receptor signaling pathway [GO:0035590]; regulation of postsynaptic membrane potential [GO:0060078]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN008480	Chromosome_2A	204	1	6	53.92156862745098	0.41846153846153844	0	6	0	0	6	0	NA	NA	NA	44.17243214475785	55	0.3090909090909091	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008481	Chromosome_2A	16576	20	223	33.826013513513516	0.4710950178818536	81.82486221677894	222	0.9504504504504504	84.49922958397535	52	0.9423076923076923	81.1616354604509	170	0.9529411764705882	0.6879944960440316	38	0	methylated (>=50%)	Q8K2G4	BBSome complex member BBS7 (BBS2-like protein 1) (Bardet-Biedl syndrome 7 protein homolog)	brain development [GO:0007420]; cilium assembly [GO:0060271]; eye development [GO:0001654]; fat cell differentiation [GO:0045444]; heart development [GO:0007507]; intracellular protein localization [GO:0008104]; limb development [GO:0060173]; non-motile cilium assembly [GO:1905515]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; primary palate development [GO:1903929]; regulation of transcription by RNA polymerase II [GO:0006357]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN008482	Chromosome_2A	2310	1	95	44.15584415584416	0.8848790322580645	56.192425793244624	95	0.7368421052631579	56.192425793244624	95	0.7368421052631579	NA	NA	NA	0.4627844195912071	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008483	Chromosome_2A	1107	1	57	48.23848238482385	0.8901098901098901	1.0061919504643964	54	0	1.0061919504643964	54	0	NA	NA	NA	1.5748031496062993	67	0	unmethylated (<10%)	Q6NYB4	Putative nucleotidyltransferase MAB21L1 (EC 2.7.7.-) (Protein mab-21-like 1)	cornea development in camera-type eye [GO:0061303]	hit with GO BP
GN008484	Chromosome_2A	6160	11	54	35.064935064935064	0.28811998763121266	86.3423760523854	53	0.9622641509433962	89.83739837398375	25	1	83.36221837088388	28	0.9285714285714286	57.07502374169041	14	0.7857142857142857	methylated (>=50%)	A2VE99	Septin-11	cytoskeleton-dependent cytokinesis [GO:0061640]; intracellular protein localization [GO:0008104]	hit with GO BP
GN008485	Chromosome_2A	19209	22	290	36.89937008693841	0.44354603694803674	93.0462241332975	268	0.9776119402985075	91.34377576257214	117	0.9487179487179487	93.86961722488039	151	1	0.3419638495359062	49	0	methylated (>=50%)	Q6PDK2	Histone-lysine N-methyltransferase 2D (Lysine N-methyltransferase 2D) (EC 2.1.1.364) (ALL1-related protein) (Myeloid/lymphoid or mixed-lineage leukemia protein 2)	heterochromatin formation [GO:0031507]; in utero embryonic development [GO:0001701]; oocyte growth [GO:0001555]; oogenesis [GO:0048477]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of intracellular estrogen receptor signaling pathway [GO:0033148]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; response to estrogen [GO:0043627]	hit with GO BP
GN008486	Chromosome_2A	8901	6	128	36.78238400179755	0.42636329616046703	82.7662625472559	127	0.8582677165354331	60.8876560332871	21	0.7142857142857143	85.03597122302158	106	0.8867924528301887	14.825174825174825	30	0.23333333333333334	methylated (>=50%)	Q80VJ2	Steroid receptor RNA activator 1 (Steroid receptor RNA activator protein) (SRAP)	negative regulation of myoblast differentiation [GO:0045662]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008487	Chromosome_2A	249	1	15	48.19277108433735	1.047979797979798	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7272727272727273	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008488	Chromosome_2A	249	1	15	48.59437751004016	1.0289256198347108	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0416666666666667	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008489	Chromosome_2A	249	1	15	48.59437751004016	1.0289256198347108	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008490	Chromosome_2A	249	1	15	48.19277108433735	1.047979797979798	NA	0	NA	NA	NA	NA	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008491	Chromosome_2A	8498	4	205	35.42009884678748	0.7735646388212585	6.307071565088129	178	0	7.321428571428571	15	0	6.242944231203432	163	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008492	Chromosome_2A	3625	12	124	39.11724137931034	0.8958091278864684	7.104232705575238	124	0	7.306302689682858	67	0	6.928969359331476	57	0	0.48594238111766747	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008493	Chromosome_2A	1592	2	59	53.64321608040201	0.5151679692856164	0.6345177664974619	44	0	0.6345177664974619	44	0	NA	NA	NA	1.1669658886894076	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008494	Chromosome_2A	44278	26	560	35.76042278332355	0.3992293273952008	76.97281493351325	554	0.851985559566787	84.53778429933969	112	0.8928571428571429	75.60343968923272	442	0.8416289592760181	0.906183368869936	28	0	methylated (>=50%)	Q8CDI6	Coiled-coil domain-containing protein 158	receptor-mediated endocytosis [GO:0006898]	hit with GO BP
GN008495	Chromosome_2A	471	1	6	42.038216560509554	0.29074074074074074	0	6	0	0	6	0	NA	NA	NA	1.3746915756080367	43	0.023255813953488372	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008496	Chromosome_2A	67124	30	1535	36.77075263691079	0.6768142821103832	11.014762888825857	1484	0.10646900269541779	1.5517241379310345	190	0.005263157894736842	12.087763357745462	1294	0.1213292117465224	20.24190679473497	60	0.08333333333333333	sparse (10-50%)	P26714	Gamma-aminobutyric acid receptor subunit beta (GABA(A) receptor)	NA	hit, no GO BP
GN008497	Chromosome_2A	1059	1	23	49.57507082152974	0.372624912033779	90.99307159353349	22	1	90.99307159353349	22	1	NA	NA	NA	92.76393831553973	29	1	methylated (>=50%)	P21783	Neurogenic locus notch homolog protein 1 (Notch 1) (xOTCH) [Cleaved into: Notch 1 extracellular truncation (NEXT); Notch 1 intracellular domain (NICD)]	axon guidance [GO:0007411]; cilium assembly [GO:0060271]; negative regulation of transcription by RNA polymerase II [GO:0000122]; Notch signaling involved in heart development [GO:0061314]; Notch signaling pathway [GO:0007219]; regulation of developmental process [GO:0050793]	hit with GO BP
GN008498	Chromosome_2A	13104	12	203	36.81318681318681	0.4588995947535149	88.63677950594693	200	0.965	93.28743545611016	36	1	87.7544356155437	164	0.9573170731707317	63.02035855363111	64	0.625	methylated (>=50%)	Q9Y2T2	AP-3 complex subunit mu-1 (AP-3 adaptor complex mu3A subunit) (Adaptor-related protein complex 3 subunit mu-1) (Mu-adaptin 3A) (Mu3A-adaptin)	anterograde axonal transport [GO:0008089]; anterograde synaptic vesicle transport [GO:0048490]; clathrin-coated vesicle cargo loading, AP-3-mediated [GO:0035654]; endocytosis [GO:0006897]; Golgi to vacuole transport [GO:0006896]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]; postsynaptic neurotransmitter receptor internalization [GO:0098884]; protein targeting to lysosome [GO:0006622]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN008499	Chromosome_2A	321	1	1	54.517133956386296	0.4692982456140351	0	1	0	0	1	0	NA	NA	NA	1.466275659824047	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008500	Chromosome_2A	537	1	1	55.121042830540034	1.8203389830508474	0	1	0	0	1	0	NA	NA	NA	1.3297872340425532	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008501	Chromosome_2A	609	1	0	52.70935960591133	0	NA	0	NA	NA	NA	NA	NA	NA	NA	7.142857142857143	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008502	Chromosome_2A	588	1	1	56.97278911564626	0.8828828828828829	NA	0	NA	NA	NA	NA	NA	NA	NA	2.380952380952381	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008503	Chromosome_2A	1920	1	4	55.104166666666664	1.4586894586894588	2.380952380952381	4	0	2.380952380952381	4	0	NA	NA	NA	0.8515167642362959	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008504	Chromosome_2A	2641	9	23	33.24498296099962	0.3160537379287379	2.851033499643621	21	0	3.466955579631636	15	0	1.6666666666666667	6	0	0.7224819379515512	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008505	Chromosome_2A	309	1	0	33.65695792880259	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0684798445847499	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008506	Chromosome_2A	1330	2	55	43.984962406015036	0.858427019034431	0.5955926146515783	55	0	0.5628517823639775	54	0	1.25	1	0	1.1147540983606556	46	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN008507	Chromosome_2A	324	2	4	35.80246913580247	0.3862891207153502	NA	0	NA	NA	NA	NA	NA	NA	NA	20	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008508	Chromosome_2A	861	4	18	41.23112659698025	0.5100710900473934	9.360374414976599	18	0	9.105691056910569	17	0	15.384615384615385	1	0	1.3424657534246576	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008509	Chromosome_2A	966	1	20	37.577639751552795	0.5866990586091709	1.9036954087346025	20	0	1.9036954087346025	20	0	NA	NA	NA	0.7849293563579278	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008510	Chromosome_2A	675	1	38	44.592592592592595	1.1379769299023959	0.46439628482972134	38	0	0.46439628482972134	38	0	NA	NA	NA	0.6467765491341539	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008511	Chromosome_2A	1530	2	40	41.89542483660131	0.5964330961894552	3.8997214484679668	19	0	4.25531914893617	18	0	0	1	0	1.0024549918166938	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008512	Chromosome_2A	1155	1	44	39.913419913419915	0.9641434262948207	0.8006742520016856	44	0	0.8006742520016856	44	0	NA	NA	NA	1.055662188099808	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008513	Chromosome_2A	432	1	24	46.06481481481482	1.054945054945055	0	2	0	0	2	0	NA	NA	NA	0.5555555555555556	10	0	NA	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN008514	Chromosome_2A	1148	2	49	43.728222996515676	0.898579894889858	0.5524861878453039	49	0	0.5695687550854354	48	0	0	1	0	1.4018691588785046	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008515	Chromosome_2A	11718	3	302	36.55913978494624	0.7719645433931148	1.4908329632684134	292	0	0.6547619047619048	47	0	1.5905701910104382	245	0	0.6051437216338881	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008516	Chromosome_2A	2532	3	56	39.1390205371248	0.5779455282100612	0.7092198581560284	56	0	1.1152416356877324	19	0	0.5820721769499418	37	0	0.4180602006688963	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008517	Chromosome_2A	10020	7	284	35.68862275449102	0.8904102730982002	0.9680239820134899	284	0	0.8187134502923976	40	0	0.9858761012445811	244	0	3.2986627043090637	47	0	unmethylated (<10%)	P17787	Neuronal acetylcholine receptor subunit beta-2	acetylcholine receptor signaling pathway [GO:0095500]; associative learning [GO:0008306]; B cell activation [GO:0042113]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; central nervous system projection neuron axonogenesis [GO:0021952]; cognition [GO:0050890]; lateral geniculate nucleus development [GO:0021771]; learning [GO:0007612]; locomotory behavior [GO:0007626]; membrane depolarization [GO:0051899]; memory [GO:0007613]; monoatomic ion transmembrane transport [GO:0034220]; monoatomic ion transport [GO:0006811]; negative regulation of action potential [GO:0045759]; nervous system process [GO:0050877]; optic nerve morphogenesis [GO:0021631]; positive regulation of B cell proliferation [GO:0030890]; positive regulation of dopamine secretion [GO:0033603]; regulation of circadian sleep/wake cycle, REM sleep [GO:0042320]; regulation of dendrite morphogenesis [GO:0048814]; regulation of dopamine metabolic process [GO:0042053]; regulation of dopamine secretion [GO:0014059]; regulation of synapse assembly [GO:0051963]; regulation of synaptic transmission, dopaminergic [GO:0032225]; response to acetylcholine [GO:1905144]; response to cocaine [GO:0042220]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; sensory perception of pain [GO:0019233]; sensory perception of sound [GO:0007605]; signal transduction [GO:0007165]; smooth muscle contraction [GO:0006939]; social behavior [GO:0035176]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]; vestibulocochlear nerve development [GO:0021562]; visual learning [GO:0008542]; visual perception [GO:0007601]	hit with GO BP
GN008518	Chromosome_2A	3658	3	74	38.73701476216512	0.5555961495043206	0.5675368898978433	73	0	0.6134969325153374	39	0	0.5326231691078562	34	0	0.76947739660147485	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008519	Chromosome_2A	1845	1	67	38.97018970189702	0.9602358351329098	0.90311986863711	64	0	0.90311986863711	64	0	NA	NA	NA	0.5633802816901409	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008520	Chromosome_2A	7077	7	134	33.785502331496396	0.6636476624761712	85.85858585858585	132	0.9090909090909091	91.33105802047781	20	0.95	84.91914694164518	112	0.9017857142857143	8.241150442477876	35	0.02857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008521	Chromosome_2A	21405	24	261	35.5617846297594	0.38612949878960984	83.62705326860412	255	0.9019607843137255	85.1037851037851	53	0.9245283018867925	83.33863275039745	202	0.8960396039603961	43.095238095238095	15	0.2	methylated (>=50%)	Q9WU06	Advillin (Peripheral nervous system villin-like protein) (Pervin)	actin filament organization [GO:0007015]; actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; cilium assembly [GO:0060271]; nervous system development [GO:0007399]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of neuron projection development [GO:0010976]; regulation of diacylglycerol biosynthetic process [GO:1900480]	hit with GO BP
GN008522	Chromosome_2A	11774	20	154	37.36198403261424	0.37556618819776716	84.02037431888178	153	0.9281045751633987	87.90035587188612	65	0.9538461538461539	82.08451704545455	88	0.9090909090909091	3.9340468614405553	71	0	methylated (>=50%)	P97432	Next to BRCA1 gene 1 protein (Membrane component chromosome 17 surface marker 2 homolog) (Neighbor of BRCA1 gene 1 protein)	macroautophagy [GO:0016236]; negative regulation of osteoblast differentiation [GO:0045668]; regulation of bone mineralization [GO:0030500]; regulation of stress-activated MAPK cascade [GO:0032872]	hit with GO BP
GN008523	Chromosome_2A	492	1	10	41.666666666666664	0.4715353651523864	0.4357298474945534	10	0	0.4357298474945534	10	0	NA	NA	NA	0.8073817762399077	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008524	Chromosome_2A	1713	4	63	43.724460011675426	0.7704757689122427	0.4668534080298786	55	0	0.5244755244755245	35	0	0.40080160320641284	20	0	2.4597116200169635	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008525	Chromosome_2A	519	2	29	57.225433526011564	0.6828947368421052	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008526	Chromosome_2A	189	1	9	52.91005291005291	0.6872727272727273	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008527	Chromosome_2A	732	1	4	41.80327868852459	0.14523809523809525	0.9049773755656109	4	0	0.9049773755656109	4	0	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008528	Chromosome_2A	719	2	7	43.39360222531293	0.21531550802139038	0	7	0	0	6	0	0	1	0	0.8711721224920802	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008529	Chromosome_2A	491	2	12	41.75152749490835	0.5646923519263944	0.7407407407407407	12	0	0.7407407407407407	12	0	NA	NA	NA	1.36986301369863	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008530	Chromosome_2A	381	1	9	43.83202099737533	0.5013157894736842	0.8048289738430584	9	0	0.8048289738430584	9	0	NA	NA	NA	0.2881844380403458	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008531	Chromosome_2A	246	1	8	41.46341463414634	0.7868852459016393	0.5952380952380952	8	0	0.5952380952380952	8	0	NA	NA	NA	0.8674698795180723	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008532	Chromosome_2A	19310	6	201	32.89487312273433	0.5052884411970513	36.1502693925751	200	0.275	44.60547504025765	21	0.42857142857142855	35.296985455431866	179	0.2569832402234637	84.95412844036697	45	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008533	Chromosome_2A	6029	3	178	36.324431912423286	0.897375927030017	1.1717633609602744	175	0	0.35545023696682465	21	0	1.2837179070523237	154	0	0.548885077186964	62	0	unmethylated (<10%)	P81491	Serum amyloid A-5 protein	NA	hit, no GO BP
GN008534	Chromosome_2A	15456	9	127	42.97360248447205	0.18028769254013602	84.39557545430603	127	0.968503937007874	84.87031700288185	37	0.972972972972973	84.28939735739607	90	0.9666666666666667	89.94614003590664	41	1	methylated (>=50%)	Q0P4I1	Centrosomal protein of 44 kDa (Cep44)	centriole replication [GO:0007099]; centriole-centriole cohesion [GO:0010457]; centrosome cycle [GO:0007098]	hit with GO BP
GN008535	Chromosome_2A	8663	8	122	35.17257301165878	0.46045819006906313	70.46966731898239	101	0.7326732673267327	94.2084942084942	26	1	62.411533420707734	75	0.64	40.298507462686565	42	0.3333333333333333	methylated (>=50%)	Q90744	Alpha-N-acetylgalactosaminidase (EC 3.2.1.49) (Alpha-galactosidase B)	glycolipid catabolic process [GO:0019377]; glycoside catabolic process [GO:0016139]; oligosaccharide metabolic process [GO:0009311]	hit with GO BP
GN008536	Chromosome_2A	2780	7	89	41.15107913669065	0.7566638531077593	0.54421768707483	89	0	0.5181347150259067	61	0	0.5818786367414797	28	0	1.0379241516966067	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008537	Chromosome_2A	26740	11	429	36.166791323859385	0.4919830268158811	71.43066980023502	390	0.6846153846153846	86.72597864768683	65	0.9384615384615385	68.99057567843761	325	0.6338461538461538	88.95976447497547	26	1	methylated (>=50%)	Q9JII1	Phosphatidylinositol polyphosphate 5-phosphatase type IV (72 kDa inositol polyphosphate 5-phosphatase) (Inositol polyphosphate-5-phosphatase E) (Phosphatidylinositol 4,5-bisphosphate 5-phosphatase) (EC 3.1.3.36) (Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase) (EC 3.1.3.86)	cilium assembly [GO:0060271]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of protein localization to cilium [GO:1903565]; negative regulation of translation [GO:0017148]; phosphatidylinositol dephosphorylation [GO:0046856]; phosphatidylinositol metabolic process [GO:0046488]; response to inositol [GO:1902140]	hit with GO BP
GN008538	Chromosome_2A	20380	10	376	35.85868498527969	0.5739402480122804	27.508419647963397	328	0.23780487804878048	20.40627885503232	98	0.20408163265306123	30.20604997807979	230	0.25217391304347825	0.5752212389380531	44	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008539	Chromosome_2A	411	1	22	50.12165450121655	0.8526166902404526	33.035714285714285	5	0.2	33.035714285714285	5	0.2	NA	NA	NA	0.7675438596491229	28	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008540	Chromosome_2A	44124	9	812	35.391170338137975	0.5879534414406467	87.37125748502994	702	0.99002849002849	95.2544311034877	33	1	87.08609956360779	669	0.9895366218236173	91.42300194931774	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008541	Chromosome_2A	8681	8	226	35.35306992281995	0.8338919798870239	0.9986542956300021	226	0	0.8578431372549019	42	0	1.0281895296032901	184	0	0.6810897435897436	36	0	unmethylated (<10%)	Q8UVR3	LIM homeobox transcription factor 1-beta.1 (LIM homeobox protein 1b) (Xlmx1b)	glomus development [GO:0072013]; neuron differentiation [GO:0030182]; pronephric nephron tubule development [GO:0039020]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008542	Chromosome_2A	10179	8	320	36.820905786423026	0.9277264396395934	1.1627906976744187	318	0	1.5843773028739867	67	0	1.08038029386344	251	0	0.8057018903005888	44	0	unmethylated (<10%)	P53413	LIM/homeobox protein LMX-1.2 (Homeobox protein LMX-1) (LIM/homeobox protein 1) (LMX)	mesonephric tubule development [GO:0072164]; neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008543	Chromosome_2A	57095	22	652	35.47420965058236	0.3630984089863538	83.0940131562108	591	0.9475465313028765	90.1673640167364	44	1	82.63311431609368	547	0.943327239488117	91.00719424460432	23	1	methylated (>=50%)	Q9Y3P9	Rab GTPase-activating protein 1 (GAP and centrosome-associated protein) (Rab6 GTPase-activating protein GAPCenA)	regulation of GTPase activity [GO:0043087]	hit with GO BP
GN008544	Chromosome_2A	9153	5	154	36.370588877963506	0.5096527860637156	73.9070788366563	154	0.8246753246753247	81.07502799552071	23	0.8695652173913043	73.26959466188626	131	0.816793893129771	48.55718782791186	46	0.5	methylated (>=50%)	P41383	Tubulin alpha-2/alpha-4 chain (EC 3.6.5.-)	microtubule-based process [GO:0007017]	hit with GO BP
GN008545	Chromosome_2A	330	1	12	42.72727272727273	0.7987091569181122	92.92035398230088	12	1	92.92035398230088	12	1	NA	NA	NA	94.06808223795079	64	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008546	Chromosome_2A	19968	10	193	33.23818108974359	0.35125976216786936	82.44074991156704	193	0.9792746113989638	88.64864864864865	17	1	82.00605601816805	176	0.9772727272727273	21.35102533172497	42	0.16666666666666666	methylated (>=50%)	Q9VVW3	Sideroflexin-2	mitochondrial transmembrane transport [GO:1990542]; one-carbon metabolic process [GO:0006730]; serine import into mitochondrion [GO:0140300]	hit with GO BP
GN008547	Chromosome_2A	27108	23	464	36.42467168363583	0.5195606137568	92.88415028783595	449	0.9977728285077951	95.54159186116098	57	1	92.54276379012109	392	0.9974489795918368	97.02894870492636	55	1	methylated (>=50%)	Q6MGA9	Bromodomain-containing protein 2 (Protein RING3)	chromatin looping [GO:0140588]; chromatin remodeling [GO:0006338]; neural tube closure [GO:0001843]; positive regulation of T-helper 17 cell lineage commitment [GO:2000330]; protein localization to chromatin [GO:0071168]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription elongation-coupled chromatin remodeling [GO:0140673]	hit with GO BP
GN008548	Chromosome_2A	777	2	24	38.48133848133848	0.8872395089922923	33.096926713947994	24	0.041666666666666664	32.99120234604106	20	0.05	33.53658536585366	4	0	9.096109839816934	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008549	Chromosome_2A	5383	4	114	36.968233327141	0.622420072845002	16.274051429598995	112	0.11607142857142858	44.59788789601949	26	0.3076923076923077	8.221709006928407	86	0.05813953488372093	0.9047619047619048	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008550	Chromosome_2A	423	1	15	55.55555555555556	0.4605836236933798	0.7575757575757576	10	0	0.7575757575757576	10	0	NA	NA	NA	0.5963590709353421	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008551	Chromosome_2A	5911	3	108	35.374725088817456	0.5864044208963779	0.5905886835587731	108	0	0.857449088960343	26	0	0.5329008341056534	82	0	0.39989336177019463	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008552	Chromosome_2A	1752	1	83	43.20776255707762	1.0193043697691047	0.7685352622061483	80	0	0.7685352622061483	80	0	NA	NA	NA	0.4672897196261682	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008553	Chromosome_2A	1371	1	27	39.82494529540482	0.49909664545356486	41.49956408020924	27	0.4444444444444444	41.49956408020924	27	0.4444444444444444	NA	NA	NA	0.8186655751125665	84	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008554	Chromosome_2A	29166	17	404	35.366522663375164	0.4432215346342854	78.93606781919816	403	0.8387096774193549	87.06683168316832	27	0.9259259259259259	78.41871087136276	376	0.8324468085106383	34.72834067547724	23	0.30434782608695654	methylated (>=50%)	P46060	Ran GTPase-activating protein 1 (RanGAP1)	activation of GTPase activity [GO:0090630]; negative regulation of protein export from nucleus [GO:0046826]; nuclear export [GO:0051168]; protein sumoylation [GO:0016925]; signal transduction [GO:0007165]	hit with GO BP
GN008555	Chromosome_2A	30696	15	297	38.356789158196506	0.26331721897732296	73.0197138993666	288	0.8125	83.40662562298446	87	0.9655172413793104	69.68984962406014	201	0.746268656716418	45.29667149059334	20	0.45	methylated (>=50%)	Q15811	Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)	clathrin-dependent synaptic vesicle endocytosis [GO:0150007]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; positive regulation of caveolin-mediated endocytosis [GO:2001288]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of growth hormone secretion [GO:0060124]; regulation of modification of postsynaptic actin cytoskeleton [GO:1905274]; regulation of postsynapse organization [GO:0099175]; regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN008556	Chromosome_2A	7768	8	112	31.655509783728114	0.5769765393716244	91.67543675015786	111	1	93.3552091878589	17	1	91.42822648798744	94	1	72.02898550724638	21	0.8571428571428571	methylated (>=50%)	Q5ZL74	Vesicle-associated membrane protein 7 (Synaptobrevin-like protein 1)	calcium-ion regulated exocytosis [GO:0017156]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; endosome to lysosome transport [GO:0008333]; eosinophil degranulation [GO:0043308]; exocytosis [GO:0006887]; neutrophil degranulation [GO:0043312]; phagocytosis, engulfment [GO:0006911]; vesicle fusion [GO:0006906]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN008557	Chromosome_2A	4520	5	49	35.06637168141593	0.3531328824304114	74.57492029755579	49	0.8979591836734694	84.30232558139535	10	0.9	73.0295566502463	39	0.8974358974358975	79.41738299904489	40	0.875	methylated (>=50%)	Q91ZG2	Metallophosphoesterase domain-containing protein 1 (EC 3.1.-.-)	NA	hit, no GO BP
GN008558	Chromosome_2A	501	1	19	60.47904191616767	0.5423931623931624	90.55374592833876	19	1	90.55374592833876	19	1	NA	NA	NA	27.586206896551722	31	0.3870967741935484	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008559	Chromosome_2A	3140	2	102	40.955414012738856	0.7773692066843849	0.9803921568627451	102	0	1.171303074670571	35	0	0.938207699773536	67	0	0.7328990228013029	46	0	unmethylated (<10%)	Q9QXN5	Inositol oxygenase (EC 1.13.99.1) (Aldehyde reductase-like 6) (Myo-inositol oxygenase) (MI oxygenase) (Renal-specific oxidoreductase)	inositol catabolic process [GO:0019310]	hit with GO BP
GN008560	Chromosome_2A	228	1	0	41.666666666666664	0	NA	0	NA	NA	NA	NA	NA	NA	NA	66.83070866141732	10	0.7	NA	NA	NA	NA	no Swiss-Prot hit
GN008561	Chromosome_2A	15369	17	494	38.02459496388835	0.8943886061634153	0.6113431390351673	459	0	0.46511627906976744	76	0	0.6439197690770483	383	0	0.48531289910600256	61	0	unmethylated (<10%)	A6QQZ7	MAGUK p55 subfamily member 7	protein localization to adherens junction [GO:0071896]	hit with GO BP
GN008562	Chromosome_2A	26217	55	768	37.750314681313654	0.8223946777677209	0.6354886475814413	767	0	0.6776057928652096	413	0	0.5989748315383286	354	0	0.8976157082748948	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008563	Chromosome_2A	1870	2	53	34.224598930481285	0.9692340791738382	0.48273301151132564	53	0	0.24213075060532688	28	0	0.5891805034815212	25	0	0.6884166417240347	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008564	Chromosome_2A	351	1	14	42.16524216524216	0.9216054013503376	1.2773722627737227	14	0	1.2773722627737227	14	0	NA	NA	NA	0.5157962604771116	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008565	Chromosome_2A	9291	7	233	34.775589279948335	0.8297354417047268	0.6079267329859467	233	0	0.3139717425431711	73	0	0.70667651091657	160	0	4.567474048442906	79	0	unmethylated (<10%)	Q07553	Guanylate cyclase 32E (EC 4.6.1.2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN008566	Chromosome_2A	4885	4	75	40.08188331627431	0.457947569924891	89.3740902474527	57	0.9649122807017544	88.52941176470588	15	1	89.46688206785137	42	0.9523809523809523	94.14414414414415	22	1	methylated (>=50%)	P41384	Cyclin-dependent kinases regulatory subunit (SUC1 homolog)	NA	hit, no GO BP
GN008567	Chromosome_2A	9587	6	148	38.24971315322833	0.42213175231820865	82.61584864272004	109	0.908256880733945	94.96981891348088	11	1	81.71252022951302	98	0.8979591836734694	42.031686859273066	36	0.5277777777777778	methylated (>=50%)	P70097	Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (Integral membrane protein CII-3) (Malate dehydrogenase [quinone] cytochrome b560 subunit) (QPs-1) (QPs1)	mitochondrial electron transport, succinate to ubiquinone [GO:0006121]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN008568	Chromosome_2A	2928	2	53	40.67622950819672	0.4406508220461709	91.01449275362319	53	1	91.08494533221194	52	1	86.48648648648648	1	1	88.85918003565062	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008569	Chromosome_2A	8338	6	204	34.92444231230511	0.803197012646106	1.0343553749538235	204	0	1.378070701018574	37	0	0.9717218036903592	167	0	0.3118121790168745	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008570	Chromosome_2A	498	1	18	41.36546184738956	0.8478199186607396	1.1278195488721805	18	0	1.1278195488721805	18	0	NA	NA	NA	44.32263116679718	27	0.5925925925925926	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008571	Chromosome_2A	2759	4	1	36.969916636462486	0.010610069375009613	47.82608695652174	1	0	NA	NA	NA	47.82608695652174	1	0	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008572	Chromosome_2A	8974	12	268	36.349453978159126	0.9041093006610248	1.2079875092448025	268	0	1.5767430401576743	108	0	1.0234278668310728	160	0	0.6996268656716418	38	0	unmethylated (<10%)	Q8BGM5	Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1)	bicarbonate transport [GO:0015701]; chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; membrane depolarization [GO:0051899]; sensory perception of smell [GO:0007608]	hit with GO BP
GN008573	Chromosome_2A	15887	9	274	35.8532133190659	0.5373125964327594	88.08948639848755	273	0.9633699633699634	95.4225352112676	18	1	87.7460142935679	255	0.9607843137254902	22.450805008944545	34	0.23529411764705882	methylated (>=50%)	Q61069	Upstream stimulatory factor 1 (Major late transcription factor 1)	cellular response to glucose stimulus [GO:0071333]; cellular response to insulin stimulus [GO:0032869]; glucose mediated signaling pathway [GO:0010255]; glucose metabolic process [GO:0006006]; late viral transcription [GO:0019086]; lipid homeostasis [GO:0055088]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to hypoxia [GO:0001666]; response to UV [GO:0009411]	hit with GO BP
GN008574	Chromosome_2A	27279	25	291	35.221232449869866	0.3455769037882476	86.88947633434039	262	0.9618320610687023	95.68783068783068	62	1	84.14271555996035	200	0.95	27.447651386530843	28	0.42857142857142855	methylated (>=50%)	Q9Y4L1	Hypoxia up-regulated protein 1 (150 kDa oxygen-regulated protein) (ORP-150) (170 kDa glucose-regulated protein) (GRP-170) (Heat shock protein family H member 4)	cellular response to hypoxia [GO:0071456]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway [GO:1903382]; negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway [GO:1903298]; response to endoplasmic reticulum stress [GO:0034976]; response to ischemia [GO:0002931]	hit with GO BP
GN008575	Chromosome_2A	49313	30	690	34.95427169306268	0.46042680490145915	62.76239673418848	668	0.7320359281437125	87.09824135839904	127	0.9763779527559056	59.20250160785966	541	0.6746765249537893	60.12238653748088	24	0.7083333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008576	Chromosome_2A	1716	1	53	43.93939393939394	0.6442536552193131	45.6596035543404	53	0.4716981132075472	45.6596035543404	53	0.4716981132075472	NA	NA	NA	0.39486673247778875	30	0	sparse (10-50%)	O75084	Frizzled-7 (Fz-7) (hFz7) (FzE3)	canonical Wnt signaling pathway [GO:0060070]; cellular response to retinoic acid [GO:0071300]; mesenchymal to epithelial transition [GO:0060231]; negative regulation of cardiac muscle cell differentiation [GO:2000726]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of ectodermal cell fate specification [GO:0042666]; neuron differentiation [GO:0030182]; non-canonical Wnt signaling pathway [GO:0035567]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial cell proliferation involved in wound healing [GO:0060054]; positive regulation of JNK cascade [GO:0046330]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphorylation [GO:0042327]; regulation of canonical Wnt signaling pathway [GO:0060828]; regulation of DNA-templated transcription [GO:0006355]; stem cell population maintenance [GO:0019827]; Wnt signaling pathway, planar cell polarity pathway [GO:0060071]	hit with GO BP
GN008577	Chromosome_2A	2916	3	41	36.41975308641975	0.42440141282547345	77.4767488879903	41	0.8780487804878049	91.38959931798806	21	1	64.92307692307692	20	0.75	88.34178131788559	22	1	methylated (>=50%)	Q84WJ2	Probable DNA primase large subunit	DNA replication initiation [GO:0006270]; DNA replication, synthesis of primer [GO:0006269]	hit with GO BP
GN008578	Chromosome_2A	816	2	19	38.970588235294116	0.6314760508308895	93.75672766415501	19	1	95.83333333333333	12	1	90.71618037135279	7	1	38.66822429906542	33	0.48484848484848486	methylated (>=50%)	Q5ZML6	Mitochondrial inner membrane scaffold 1 (Protein FAM210A)	NA	hit, no GO BP
GN008579	Chromosome_2A	720	1	13	37.5	0.5183872396987151	0.5190311418685121	13	0	0.5190311418685121	13	0	NA	NA	NA	0.5344735435595938	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008580	Chromosome_2A	576	1	11	37.326388888888886	0.5837479270315091	0.18726591760299627	11	0	0.18726591760299627	11	0	NA	NA	NA	0.7525870178739417	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008581	Chromosome_2A	67876	19	1658	35.533914785785846	0.7749053268368163	3.0128399555151146	1648	0.016383495145631068	1.053740779768177	116	0	3.1231459287562	1532	0.01762402088772846	0.3872216844143272	49	0	unmethylated (<10%)	Q20930	Metalloprotease mig-17 (EC 3.4.24.-) (Abnormal cell migration protein 17)	gonad morphogenesis [GO:0035262]; intracellular protein localization [GO:0008104]; protein autoprocessing [GO:0016540]; regulation of cell migration [GO:0030334]; regulation of distal tip cell migration [GO:1903354]; zymogen activation [GO:0031638]	hit with GO BP
GN008582	Chromosome_2A	387	1	7	40.310077519379846	0.45	0	6	0	0	6	0	NA	NA	NA	0.3673094582185491	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008583	Chromosome_2A	3744	5	111	38.782051282051285	0.7889557135046473	2.8742239595309265	111	0	2.393617021276596	63	0	3.240178209801539	48	0	1.1382565241532483	85	0	unmethylated (<10%)	Q8MP06	Senecionine N-oxygenase (SNO) (EC 1.14.13.101)	alkaloid metabolic process [GO:0009820]; protein homotetramerization [GO:0051289]	hit with GO BP
GN008584	Chromosome_2A	807	1	1	45.353159851301115	0.027455516619603305	0	1	0	0	1	0	NA	NA	NA	0.5118110236220472	64	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008585	Chromosome_2A	32103	22	369	34.98115440924524	0.37598474555312444	81.75538039146223	361	0.9030470914127424	78.08609035930274	49	0.8775510204081632	82.2770724798948	312	0.907051282051282	0.5684509711037423	35	0	methylated (>=50%)	Q7SY29	Glucose-6-phosphate exchanger SLC37A2 (Solute carrier family 37 member 2)	glucose-6-phosphate transport [GO:0015760]; phagosome maturation [GO:0090382]; phosphate ion transmembrane transport [GO:0035435]	hit with GO BP
GN008586	Chromosome_2A	14140	6	285	36.51343705799151	0.6047259833043468	65.79554995801847	282	0.75177304964539	74.0894901144641	20	0.85	65.35507046145344	262	0.7442748091603053	19.47019867549669	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008587	Chromosome_2A	312	1	0	43.26923076923077	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008588	Chromosome_2A	468	1	0	42.52136752136752	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008589	Chromosome_2A	441	1	0	41.723356009070294	0	NA	0	NA	NA	NA	NA	NA	NA	NA	87.8048780487805	9	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008590	Chromosome_2A	651	1	0	46.08294930875576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	85.63397876327295	20	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008591	Chromosome_2A	261	1	0	43.29501915708812	0	NA	0	NA	NA	NA	NA	NA	NA	NA	86.44705882352942	28	1	NA	NA	NA	NA	no Swiss-Prot hit
GN008592	Chromosome_2A	3182	2	66	34.663733500942804	0.6922042479136179	42.51993620414673	66	0.30303030303030304	71.97346600331674	15	0.4666666666666667	35.505529225908376	51	0.2549019607843137	0.5230622919638611	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008593	Chromosome_2A	528	1	5	36.17424242424242	0.30205949656750575	3.787878787878788	5	0	3.787878787878788	5	0	NA	NA	NA	1.2871287128712872	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008594	Chromosome_2A	987	1	35	40.22289766970618	0.8835942295887047	0.6131549609810479	35	0	0.6131549609810479	35	0	NA	NA	NA	0.6211180124223602	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008595	Chromosome_2A	3484	6	55	38.576349024110215	0.4244047104891883	0.9523809523809523	55	0	0.8015087223008015	47	0	1.7543859649122806	8	0	5.176470588235294	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008596	Chromosome_2A	417	1	7	43.645083932853716	0.35597560975609754	73.14814814814815	7	0.7142857142857143	73.14814814814815	7	0.7142857142857143	NA	NA	NA	83.82352941176471	10	1	methylated (>=50%)	O75575	DNA-directed RNA polymerase III subunit RPC9 (RNA polymerase III subunit C9) (Calcitonin gene-related peptide-receptor component protein) (CGRP-RCP) (CGRP-receptor component protein) (CGRPRCP) (HsC17)	termination of RNA polymerase III transcription [GO:0006386]; transcription by RNA polymerase III [GO:0006383]; transcription initiation at RNA polymerase III promoter [GO:0006384]	hit with GO BP
GN008597	Chromosome_2A	27803	7	395	34.68690429090386	0.4737595060905241	62.29055422574112	393	0.7022900763358778	68.87791107974594	74	0.581081081081081	61.52296369392706	319	0.7304075235109718	0.5664488017429193	44	0	methylated (>=50%)	P20749	B-cell lymphoma 3 protein (BCL-3) (Proto-oncogene BCL3)	canonical NF-kappaB signal transduction [GO:0007249]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of translation [GO:0045727]; protein import into nucleus [GO:0006606]; regulation of apoptotic process [GO:0042981]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]; response to UV-C [GO:0010225]; response to virus [GO:0009615]	hit with GO BP
GN008598	Chromosome_2A	10726	12	87	36.25769159052769	0.25130802914990225	71.8788781335319	82	0.8536585365853658	76.27118644067797	9	0.8888888888888888	71.45578231292517	73	0.8493150684931506	82.47011952191235	23	0.9565217391304348	methylated (>=50%)	F1RCP1	Beclin-1	autophagy [GO:0006914]; cellular response to nitrogen starvation [GO:0006995]; cellular senescence [GO:0090398]; early endosome to late endosome transport [GO:0045022]; glycolytic process [GO:0006096]; heart development [GO:0007507]; late endosome to vacuole transport [GO:0045324]; mitophagy [GO:0000423]; positive regulation of autophagy [GO:0010508]; regulation of skeletal muscle tissue regeneration [GO:0043416]	hit with GO BP
GN008599	Chromosome_2A	183	1	18	49.72677595628415	1.7210031347962382	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008600	Chromosome_2A	24229	21	413	35.06954476041108	0.5586602418302186	83.4991600982039	397	0.9269521410579346	92.58547829427583	51	1	82.6649737241209	346	0.9161849710982659	0.5671077504725898	39	0	methylated (>=50%)	Q05AL1	Armadillo repeat-containing protein 8	animal organ development [GO:0048513]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN008601	Chromosome_2A	4996	9	153	39.75180144115292	0.7753569751271234	78.57448325017819	153	0.7973856209150327	73.32194288503783	105	0.7047619047619048	85.94928032899246	48	1	10.364025695931478	42	0	methylated (>=50%)	Q5R7B8	Kelch-like protein 20	Golgi to endosome transport [GO:0006895]; negative regulation of apoptotic process [GO:0043066]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K33-linked ubiquitination [GO:1990390]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008602	Chromosome_2A	23326	23	368	35.99845665780674	0.4886379859842802	79.93896881068441	366	0.9453551912568307	82.69568269568269	60	0.9166666666666666	79.58809864188706	306	0.9509803921568627	13.097345132743364	27	0	methylated (>=50%)	Q8CHT3	Integrator complex subunit 5 (Int5)	regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]; snRNA processing [GO:0016180]	hit with GO BP
GN008603	Chromosome_2A	21628	17	260	36.48048825596449	0.36201926518705607	71.48478673318812	260	0.823076923076923	66.93706981317601	87	0.7586206896551724	73.30512643904359	173	0.8554913294797688	0.35294117647058826	37	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008604	Chromosome_2A	2396	2	75	37.31218697829716	0.9039917498805242	0.6480698788391096	75	0	0.5629838142153413	48	0	0.7048872180451128	27	0	0.8326029798422436	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008605	Chromosome_2A	757	2	35	44.91413474240423	0.919358756376002	0.3460207612456747	35	0	0.2288329519450801	27	0	0.7092198581560284	8	0	1.3434378229417843	65	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN008606	Chromosome_2A	1416	1	58	43.00847457627118	0.8864519471548226	0.5321722302854378	58	0	0.5321722302854378	58	0	NA	NA	NA	0.6880733944954128	7	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN008607	Chromosome_2A	1371	1	62	43.544857768052516	0.9604528711215565	0.38691523039043263	62	0	0.38691523039043263	62	0	NA	NA	NA	2.211777716339508	61	0	unmethylated (<10%)	Q9PTS8	Neuronal acetylcholine receptor subunit alpha-9 (Nicotinic acetylcholine receptor subunit alpha-9) (NACHR alpha-9)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN008608	Chromosome_2A	7318	6	239	37.86553703197595	0.913488697614173	1.2563285205325332	239	0	0.8960086885691013	107	0	1.4463697551195762	132	0	2.277348515656771	67	0	unmethylated (<10%)	B7Z0W9	Proton channel OtopLc (Otopetrin-Lc) (DmOtopLc)	proton transmembrane transport [GO:1902600]	hit with GO BP
GN008609	Chromosome_2A	15379	5	181	32.82398075297483	0.4419663349060011	72.86843591191418	181	0.8674033149171271	92.00913242009132	9	1	72.04554377699255	172	0.8604651162790697	85.79373104145601	36	0.9166666666666666	methylated (>=50%)	Q9H6E4	Coiled-coil domain-containing protein 134	positive regulation of MyD88-dependent toll-like receptor signaling pathway [GO:0034126]; positive regulation of Wnt signaling pathway [GO:0030177]; regulation of glycoprotein biosynthetic process [GO:0010559]; regulation of ossification [GO:0030278]	hit with GO BP
GN008610	Chromosome_2A	8084	7	108	33.90648193963384	0.4661321271490763	79.59444129325014	108	0.8518518518518519	92.030250145433385	24	0.9583333333333334	75.58597412338271	84	0.8214285714285714	48.497854077253216	49	0.5306122448979592	methylated (>=50%)	Q28CH8	Protein YIPF6 (YIP1 family member 6)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN008611	Chromosome_2A	14668	10	508	40.14862285246796	0.8610211278428505	0.8897316219369895	472	0	0.46332046332046334	75	0	0.9890307498651322	397	0	0.6261740763932373	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008612	Chromosome_2A	23710	16	566	34.4664698439477	0.8040990545326254	3.4565771980884623	540	0.037037037037037035	0.4269293924466338	71	0	3.8287743080771404	469	0.042643923240938165	0.6358381502890174	40	0	unmethylated (<10%)	Q28728	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (rKST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)	myo-inositol transport [GO:0015798]	hit with GO BP
GN008613	Chromosome_2A	8952	13	230	36.15951742627346	0.7890422550108414	0.5902057744456851	229	0	0.34860557768924305	56	0	0.6362773029439696	173	0	0.7836990595611285	43	0	unmethylated (<10%)	Q28728	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (rKST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)	myo-inositol transport [GO:0015798]	hit with GO BP
GN018691	Chromosome_2A	382	1	13	45.026178010471206	0.673721340388007	0.3460207612456747	13	0	0.3460207612456747	13	0	NA	NA	NA	0.8688456764584195	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008614	Chromosome_2A	540	2	17	38.51851851851852	0.85	0.7131537242472267	17	0	0.7778738115816768	15	0	0	2	0	0.2398604448320977	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008615	Chromosome_2A	375	1	11	37.06666666666667	0.8986928104575164	0.2089864158829676	11	0	0.2089864158829676	11	0	NA	NA	NA	0.2753195673549656	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008616	Chromosome_2A	8321	9	136	36.37783920201899	0.5070425059456708	0.68630254503860455	136	0	0.9383924928600571	52	0	0.550297160466652	84	0	1.1355034065102196	72	0	unmethylated (<10%)	Q28728	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (rKST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)	myo-inositol transport [GO:0015798]	hit with GO BP
GN008617	Chromosome_2A	2859	3	67	34.52256033578174	0.7899548839933027	1.7141416687673305	67	0	0.9803921568627451	14	0	1.822389354932022	53	0	0.4596380350474002	73	0	unmethylated (<10%)	P31639	Sodium/glucose cotransporter 2 (Na(+)/glucose cotransporter 2) (Low affinity sodium-glucose cotransporter) (Solute carrier family 5 member 2)	alpha-glucoside transport [GO:0000017]; carbohydrate metabolic process [GO:0005975]; D-glucose import across plasma membrane [GO:0098708]; hexose transmembrane transport [GO:0008645]; renal D-glucose absorption [GO:0035623]; sodium ion import across plasma membrane [GO:0098719]	hit with GO BP
GN008618	Chromosome_2A	13205	15	323	34.87315410829231	0.8046127168807727	0.7194662024949231	323	0	0.624113475177305	89	0	0.7439824945295405	234	0	2.438340807174888	69	0	unmethylated (<10%)	Q28728	Sodium/myo-inositol cotransporter 2 (Na(+)/myo-inositol cotransporter 2) (Sodium-dependent glucose cotransporter) (Sodium/glucose cotransporter KST1) (rKST1) (Sodium/myo-inositol transporter 2) (SMIT2) (Solute carrier family 5 member 11)	myo-inositol transport [GO:0015798]	hit with GO BP
GN008619	Chromosome_2A	21739	13	358	36.27581765490593	0.5005749893309072	40.5562363471682	339	0.4218289085545723	32.44803695150115	42	0.35714285714285715	41.858883185950155	297	0.43097643097643096	2.5157232704402515	31	0	sparse (10-50%)	Q3KPT0	Coiled-coil domain-containing protein 169	NA	hit, no GO BP
GN008620	Chromosome_2A	327	1	5	46.48318042813456	0.29301075268817206	0	5	0	0	5	0	NA	NA	NA	1.321279554937413	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008621	Chromosome_2A	8786	7	158	35.11267926246301	0.5834438700458118	62.697644401419815	154	0.8831168831168831	89.96728462377317	59	1	56.81104833647206	95	0.8105263157894737	74.24496644295301	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008622	Chromosome_2A	6454	4	120	35.76076851564921	0.5833596962986397	85.88513419552218	120	1	92.72807404142794	40	1	82.73059731816335	80	1	82.19110783591255	48	1	methylated (>=50%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN008623	Chromosome_2A	15663	7	278	35.56789886994829	0.5611959804046661	22.97943070849782	267	0.14606741573033707	35.481425322213795	30	0.2	21.722560975609756	237	0.13924050632911392	1.7335766423357664	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008624	Chromosome_2A	438	1	3	39.726027397260275	0.1813664596273292	9.659090909090908	3	0	9.659090909090908	3	0	NA	NA	NA	1.8658374055975122	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008625	Chromosome_2A	10877	4	288	37.767766847476324	0.7457287384385093	2.5858665613896563	249	0	0.9578544061302682	45	0	2.8834928788232546	204	0	4.429223744292237	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008626	Chromosome_2A	282	1	12	47.163120567375884	0.7932489451476793	2.5906735751295336	12	0	2.5906735751295336	12	0	NA	NA	NA	0.9675858732462506	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008627	Chromosome_2A	26238	7	427	37.49904718347435	0.4630463532146549	73.19779229556207	408	0.7867647058823529	43.38592233009709	42	0.4523809523809524	76.24782716662529	366	0.825136612021858	0.7482993197278912	41	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008628	Chromosome_2A	1611	1	106	44.506517690875235	1.332235918239975	0.6499535747446611	65	0	0.6499535747446611	65	0	NA	NA	NA	0.49504950495049505	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008629	Chromosome_2A	877	2	16	37.058152793614596	0.5325237191650853	1.3157894736842106	16	0	1.593625498007968	13	0	0.5494505494505495	3	0	0.8368200836820083	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008630	Chromosome_2A	2425	2	85	39.21649484536083	0.9119445378448687	0.31029619181946405	85	0	0.22172949002217296	52	0	0.402067777139575	33	0	0.4699248120300752	72	0	unmethylated (<10%)	Q92847	Growth hormone secretagogue receptor type 1 (GHS-R) (GH-releasing peptide receptor) (GHRP) (Ghrelin receptor)	actin polymerization or depolymerization [GO:0008154]; adult feeding behavior [GO:0008343]; cellular response to insulin-like growth factor stimulus [GO:1990314]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to thyroid hormone stimulus [GO:0097067]; decidualization [GO:0046697]; G protein-coupled receptor signaling pathway [GO:0007186]; ghrelin secretion [GO:0036321]; growth hormone secretion [GO:0030252]; hormone-mediated signaling pathway [GO:0009755]; learning [GO:0007612]; memory [GO:0007613]; negative regulation of appetite [GO:0032099]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of locomotion involved in locomotory behavior [GO:0090327]; negative regulation of macrophage apoptotic process [GO:2000110]; negative regulation of norepinephrine secretion [GO:0010700]; negative regulation of tumor necrosis factor production [GO:0032720]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of appetite [GO:0032100]; positive regulation of eating behavior [GO:1904000]; positive regulation of fatty acid metabolic process [GO:0045923]; positive regulation of multicellular organism growth [GO:0040018]; positive regulation of small intestinal transit [GO:0120058]; positive regulation of small intestine smooth muscle contraction [GO:1904349]; positive regulation of sprouting angiogenesis [GO:1903672]; positive regulation of vascular endothelial cell proliferation [GO:1905564]; postsynaptic modulation of chemical synaptic transmission [GO:0099170]; regulation of defecation [GO:2000292]; regulation of gastric motility [GO:1905333]; regulation of growth hormone secretion [GO:0060123]; regulation of hindgut contraction [GO:0043134]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of postsynapse organization [GO:0099175]; regulation of synaptic plasticity [GO:0048167]; regulation of transmission of nerve impulse [GO:0051969]; response to dexamethasone [GO:0071548]; response to estradiol [GO:0032355]; response to follicle-stimulating hormone [GO:0032354]; response to growth hormone [GO:0060416]; response to hormone [GO:0009725]; response to L-glutamate [GO:1902065]; spermatogenesis [GO:0007283]	hit with GO BP
GN008631	Chromosome_2A	204	1	6	54.411764705882355	0.40936454849498327	1.079136690647482	6	0	1.079136690647482	6	0	NA	NA	NA	0.5272407732864675	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008632	Chromosome_2A	768	1	17	40.885416666666664	0.5322896281800391	1.2591815320041972	17	0	1.2591815320041972	17	0	NA	NA	NA	8.798017348203222	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008633	Chromosome_2A	4254	9	98	36.08368594264222	0.713751057207329	92.52064108790675	97	0.979381443298969	93.48189415041783	30	1	92.12688270196257	67	0.9701492537313433	87.36406007250129	28	1	methylated (>=50%)	Q9VPQ2	DnaJ homolog shv (Protein shriveled)	germ-line stem-cell niche homeostasis [GO:0060250]; male germ-line stem cell population maintenance [GO:0036098]; positive regulation of integrin-mediated signaling pathway [GO:2001046]; positive regulation of synapse maturation [GO:0090129]; protein folding [GO:0006457]; protein maturation [GO:0051604]	hit with GO BP
GN008634	Chromosome_2A	1169	4	38	38.49443969204448	0.8783217336285986	20.27152113545202	38	0	18.610747051114025	30	0	24.264705882352942	8	0	1.0743061772605194	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008635	Chromosome_2A	459	1	26	45.53376906318083	1.1243640474844545	0.3218884120171674	26	0	0.3218884120171674	26	0	NA	NA	NA	0.565843621399177	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008636	Chromosome_2A	2115	1	90	43.451536643026	0.9015601466367331	0.5631536604987932	90	0	0.5631536604987932	90	0	NA	NA	NA	0.6482429205049471	57	0	unmethylated (<10%)	F6ZQ54	Tripartite motif containing 13	ERAD pathway [GO:0036503]; innate immune response [GO:0045087]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of macroautophagy [GO:0016239]; protein ubiquitination [GO:0016567]	hit with GO BP
GN008637	Chromosome_2A	1980	1	78	44.94949494949495	0.781642238237914	0.9104151493080845	78	0	0.9104151493080845	78	0	NA	NA	NA	0.9775967413441955	40	0	unmethylated (<10%)	Q5M7V1	E3 ubiquitin-protein ligase TRIM13 (EC 2.3.2.27) (Putative tumor suppressor RFP2) (RING-type E3 ubiquitin transferase TRIM13) (Ret finger protein 2) (Tripartite motif-containing protein 13)	antiviral innate immune response [GO:0140374]; ERAD pathway [GO:0036503]; innate immune response [GO:0045087]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of macroautophagy [GO:0016239]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN008638	Chromosome_2A	406	2	21	44.58128078817734	1.0417888563049853	0.36496350364963503	21	0	0.4819277108433735	17	0	0	4	0	0.7038123167155426	35	0	unmethylated (<10%)	P22448	Retinoic acid receptor beta (RAR-beta) (Nuclear receptor subfamily 1 group B member 2)	beak morphogenesis [GO:0071729]; cell differentiation [GO:0030154]; inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration [GO:0070660]; limb morphogenesis [GO:0035108]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; response to retinoic acid [GO:0032526]; retinoic acid receptor signaling pathway [GO:0048384]	hit with GO BP
GN008639	Chromosome_2A	414	1	17	48.55072463768116	0.696969696969697	1.2195121951219512	17	0	1.2195121951219512	17	0	NA	NA	NA	0.5857087075361187	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008640	Chromosome_2A	12830	13	162	35.29228371005456	0.41566040980885455	89.96908809891808	162	0.9753086419753086	93.5704960835509	48	1	88.85176184690158	114	0.9649122807017544	89.65348950707663	26	1	methylated (>=50%)	Q8WV83	Solute carrier family 35 member F5 (Hepatitis C virus NS5A-transactivated protein 3) (HCV NS5A-transactivated protein 3)	choline transport [GO:0015871]	hit with GO BP
GN008641	Chromosome_2A	987	1	41	42.04660587639311	0.9414433277498604	0.5161290322580645	41	0	0.5161290322580645	41	0	NA	NA	NA	0.5307524196066188	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008642	Chromosome_2A	984	1	36	40.7520325203252	0.8858214553638409	0.22321428571428573	36	0	0.22321428571428573	36	0	NA	NA	NA	0.5226480836236934	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008643	Chromosome_2A	153	1	5	45.751633986928105	0.6929347826086957	0.7352941176470589	5	0	0.7352941176470589	5	0	NA	NA	NA	0.7382169222032936	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008644	Chromosome_2A	7350	10	252	37.414965986394556	0.979926894342803	1.5183867141162515	252	0	0.951531370799881	81	0	1.7237664296487827	171	0	0.5698005698005698	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008645	Chromosome_2A	399	1	5	43.1077694235589	0.27153940383830133	89.53488372093024	5	1	89.53488372093024	5	1	NA	NA	NA	88.79266428935303	26	0.9615384615384616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008646	Chromosome_2A	573	1	5	43.80453752181501	0.1910764305722289	68.42105263157895	3	0.6666666666666666	68.42105263157895	3	0.6666666666666666	NA	NA	NA	87.6038781163435	26	0.9230769230769231	NA	NA	NA	NA	no Swiss-Prot hit
GN008647	Chromosome_2A	1293	1	41	43.851508120649655	0.6618352059925093	77.74515560775103	41	0.8048780487804879	77.74515560775103	41	0.8048780487804879	NA	NA	NA	5.29627687467226	29	0	methylated (>=50%)	B2RRE7	OTU domain-containing protein 4 (EC 3.4.19.12)	antiviral innate immune response [GO:0140374]; DNA alkylation repair [GO:0006307]; negative regulation of interleukin-1-mediated signaling pathway [GO:2000660]; negative regulation of toll-like receptor signaling pathway [GO:0034122]; protein K11-linked deubiquitination [GO:0035871]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]; regulation of protein K48-linked deubiquitination [GO:1903093]	hit with GO BP
GN008648	Chromosome_2A	957	1	30	42.00626959247649	0.7414772727272727	0.5279831045406547	30	0	0.5279831045406547	30	0	NA	NA	NA	0.6708760852407262	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008649	Chromosome_2A	366	2	24	43.98907103825137	1.359752321981424	0.7281553398058253	21	0	0.6329113924050633	17	0	1.0416666666666667	4	0	0.6587072869493619	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008650	Chromosome_2A	8181	7	178	36.51142892066984	0.6528749546059799	88.7780548628429	178	0.8539325842696629	76.22439893143365	63	0.746031746031746	92.0638620207435	115	0.9130434782608695	0.7421150278293135	51	0	methylated (>=50%)	Q05192	Nuclear hormone receptor FTZ-F1 beta (Nuclear hormone receptor HR39) (dHR39) (Nuclear receptor subfamily 5 group B member 1)	regulation of DNA-templated transcription [GO:0006355]; spermathecum morphogenesis [GO:0035211]	hit with GO BP
GN008651	Chromosome_2A	282	1	6	50	0.43229432805314255	0.35335689045936397	6	0	0.35335689045936397	6	0	NA	NA	NA	0.3971756398940865	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008652	Chromosome_2A	498	1	12	43.77510040160642	0.5031573629704471	0.18867924528301888	12	0	0.18867924528301888	12	0	NA	NA	NA	0.7215619694397284	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008653	Chromosome_2A	2162	2	88	42.5531914893617	0.9037817501223214	0.8817635270541082	88	0	0.8753647353063777	85	0	1.0416666666666667	3	0	0.6756756756756757	59	0	unmethylated (<10%)	Q6NSJ0	Alpha-galactosidase MYORG (EC 3.2.1.22) (Myogenesis regulating glycosidase) (Nuclear envelope transmembrane protein 37)	carbohydrate metabolic process [GO:0005975]; positive regulation of insulin-like growth factor receptor signaling pathway [GO:0043568]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN008654	Chromosome_2A	3513	7	100	36.57842300028466	0.8586177061489053	1.6501650165016502	100	0	1.0020876826722338	51	0	2.372093023255814	49	0	0.7751937984496124	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008655	Chromosome_2A	2360	3	76	39.110169491525426	0.8441423972589845	0.4657351962741184	76	0	0.4814305364511692	46	0	0.45103092783505155	30	0	89.7308075772682	29	1	unmethylated (<10%)	Q0VCN1	NmrA-like family domain-containing protein 1	NA	hit, no GO BP
GN008656	Chromosome_2A	2267	6	38	35.421261579179536	0.5550787391427614	88.41934173100366	37	1	80.4812834224599	12	1	91.88558085230589	25	1	0.6197183098591549	50	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008657	Chromosome_2A	5682	5	101	38.454769447377686	0.4915586985234789	83.44613133345528	99	0.9191919191919192	89.64102564102564	18	0.9444444444444444	82.10151380231522	81	0.9135802469135802	66.21621621621621	4	0.75	methylated (>=50%)	Q6UWE0	E3 ubiquitin-protein ligase LRSAM1 (EC 2.3.2.27) (Leucine-rich repeat and sterile alpha motif-containing protein 1) (RING-type E3 ubiquitin transferase LRSAM1) (Tsg101-associated ligase) (hTAL)	negative regulation of endocytosis [GO:0045806]; positive regulation of autophagosome assembly [GO:2000786]; positive regulation of xenophagy [GO:1904417]; protein autoubiquitination [GO:0051865]; protein catabolic process [GO:0030163]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent endocytosis [GO:0070086]; viral budding [GO:0046755]	hit with GO BP
GN008658	Chromosome_2A	12019	13	206	36.04293202429486	0.5300812277073405	92.80993067870385	205	1	94.99459848757652	48	1	92.17987329940804	157	1	94.51913133402275	18	1	methylated (>=50%)	Q6YP21	Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7) (Cysteine-S-conjugate beta-lyase 2) (EC 4.4.1.13) (Kynurenine aminotransferase 3) (Kynurenine aminotransferase III) (KATIII) (Kynurenine--glyoxylate transaminase) (EC 2.6.1.63) (Kynurenine--oxoglutarate transaminase III)	NA	hit, no GO BP
GN008659	Chromosome_2A	9896	6	232	35.43856103476152	0.7493954887532184	85.36452294891905	229	0.9039301310043668	92.14567792891619	48	1	84.11660206718346	181	0.8784530386740331	85.23573200992556	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008660	Chromosome_2A	25223	9	473	34.69056020298933	0.6251880401561073	74.80303472424862	405	0.908641975308642	71.26126126126127	32	0.90625	75.11509763454517	373	0.9088471849865952	19.140871762476312	25	0.2	methylated (>=50%)	Q6ZV65	Protein FAM47E	protein localization to chromatin [GO:0071168]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN008661	Chromosome_2A	789	1	9	40.43092522179975	0.2805832147937411	92.96875	6	1	92.96875	6	1	NA	NA	NA	93.14359637774903	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008662	Chromosome_2A	615	1	17	38.048780487804876	0.8101511042231693	54.15094339622642	17	0.5882352941176471	54.15094339622642	17	0.5882352941176471	NA	NA	NA	77.1384136858476	67	0.8805970149253731	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008663	Chromosome_2A	1064	2	4	38.06390977443609	0.10747474747474747	10.344827586206897	4	0	10.344827586206897	4	0	NA	NA	NA	32.80701754385965	12	0.16666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN008664	Chromosome_2A	3258	1	24	36.70963781461019	0.22456382199629518	37.2093023255814	24	0.2916666666666667	37.2093023255814	24	0.2916666666666667	NA	NA	NA	56.797583081571	11	0.8181818181818182	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008665	Chromosome_2A	243	1	6	37.44855967078189	0.7063953488372093	0	6	0	0	6	0	NA	NA	NA	0.5787781350482315	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008666	Chromosome_2A	540	1	10	45.55555555555556	0.3593053430035265	NA	0	NA	NA	NA	NA	NA	NA	NA	36.60062565172054	21	0.2857142857142857	NA	NA	NA	NA	no Swiss-Prot hit
GN008667	Chromosome_2A	279	1	5	44.80286738351254	0.3696343402225755	61.1764705882353	4	1	61.1764705882353	4	1	NA	NA	NA	34.75	21	0.09523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN008668	Chromosome_2A	381	1	1	40.94488188976378	0.06278839815425181	1.3513513513513513	1	0	1.3513513513513513	1	0	NA	NA	NA	3.888358778625954	62	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016122	Chromosome_3A	189	1	9	50.79365079365079	0.7411764705882353	0	9	0	0	9	0	NA	NA	NA	0.5740057400574006	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015534	Chromosome_3A	9163	9	220	38.229837389501256	0.657749882373363	1.0238122627401358	212	0	0.7349563619660082	47	0	1.120319214241866	165	0	0.9452540370224498	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016121	Chromosome_3A	772	3	21	37.30569948186528	0.8022962339783244	0.6386861313868614	21	0	0.9446693657219973	15	0	0	6	0	1.0328997704667178	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016120	Chromosome_3A	180	1	8	52.22222222222222	0.6566347469220246	0	8	0	0	8	0	NA	NA	NA	0.48678720445062584	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015536	Chromosome_3A	7177	9	167	37.327574195346244	0.6707934617507043	4.871060171919771	167	0.005988023952095809	1.9230769230769231	47	0	5.998868138087153	120	0.008333333333333333	1.347488770926909	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016111	Chromosome_3A	13956	13	178	36.57208369160218	0.38714684590166387	86.99397869383974	177	0.96045197740113	93.89815627743634	41	1	85.1473523541153	136	0.9485294117647058	91.81091877496671	29	0.9655172413793104	methylated (>=50%)	Q803R7	Crooked neck-like protein 1 (Crooked neck pre-mRNA splicing factor 1)	spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN016110	Chromosome_3A	6696	16	56	35.69295101553166	0.2630627799167125	70.57310800881704	56	0.9107142857142857	76.32508833922262	40	0.975	61.03515625	16	0.75	78.99641577060932	41	1	methylated (>=50%)	Q8NHU2	Cilia- and flagella-associated protein 61	cilium movement [GO:0003341]; cilium organization [GO:0044782]; flagellated sperm motility [GO:0030317]; sperm flagellum assembly [GO:0120316]; sperm mitochondrial sheath assembly [GO:0120317]	hit with GO BP
GN016109	Chromosome_3A	809	3	10	39.18417799752781	0.3335807356094343	74.30278884462152	10	0.9	62.96296296296296	2	1	76.48456057007125	8	0.875	78.19843342036553	41	0.8780487804878049	methylated (>=50%)	Q8CEL2	Cilia- and flagella-associated protein 61	cilium movement [GO:0003341]; cilium organization [GO:0044782]; flagellated sperm motility [GO:0030317]; sperm flagellum assembly [GO:0120316]; spermatid nucleus elongation [GO:0007290]	hit with GO BP
GN016108	Chromosome_3A	741	1	14	39.54116059379217	0.48363636363636364	75.90221187427241	14	0.9285714285714286	75.90221187427241	14	0.9285714285714286	NA	NA	NA	64.11722659042174	19	0.8421052631578947	methylated (>=50%)	Q60613	Adenosine receptor A2a	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; astrocyte activation [GO:0048143]; eating behavior [GO:0042755]; excitatory postsynaptic potential [GO:0060079]; G protein-coupled adenosine receptor signaling pathway [GO:0001973]; G protein-coupled receptor signaling pathway [GO:0007186]; inhibition of non-skeletal tissue mineralization [GO:0140928]; inhibitory postsynaptic potential [GO:0060080]; locomotory behavior [GO:0007626]; membrane depolarization [GO:0051899]; negative regulation of alpha-beta T cell activation [GO:0046636]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of inflammatory response [GO:0050728]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of protein kinase activity [GO:0006469]; negative regulation of vascular permeability [GO:0043116]; neuron projection morphogenesis [GO:0048812]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of acetylcholine secretion, neurotransmission [GO:0014057]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of glutamate secretion [GO:0014049]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of protein secretion [GO:0050714]; positive regulation of synaptic transmission, GABAergic [GO:0032230]; positive regulation of synaptic transmission, glutamatergic [GO:0051968]; positive regulation of urine volume [GO:0035810]; prepulse inhibition [GO:0060134]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of calcium ion transport [GO:0051924]; regulation of DNA-templated transcription [GO:0006355]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of norepinephrine secretion [GO:0014061]; response to alkaloid [GO:0043279]; response to amphetamine [GO:0001975]; response to caffeine [GO:0031000]; response to purine-containing compound [GO:0014074]; response to xenobiotic stimulus [GO:0009410]; synaptic transmission, cholinergic [GO:0007271]; synaptic transmission, dopaminergic [GO:0001963]; synaptic transmission, glutamatergic [GO:0035249]; vasodilation [GO:0042311]	hit with GO BP
GN016107	Chromosome_3A	1366	4	17	37.26207906295754	0.35856339941943055	55.445544554455445	16	0.5625	55.859375	10	0.5	54.729729729729726	6	0.6666666666666666	49.17787742899851	11	0.5454545454545454	methylated (>=50%)	Q8CEL2	Cilia- and flagella-associated protein 61	cilium movement [GO:0003341]; cilium organization [GO:0044782]; flagellated sperm motility [GO:0030317]; sperm flagellum assembly [GO:0120316]; spermatid nucleus elongation [GO:0007290]	hit with GO BP
GN016106	Chromosome_3A	5120	6	73	37.578125	0.40555555555555556	82.16406421816582	72	0.9027777777777778	91.2932138284251	14	0.9285714285714286	80.27084439723845	58	0.896551724137931	91.6402356139556	63	1	methylated (>=50%)	Q9Z1C7	Rap guanine nucleotide exchange factor 4 (Exchange factor directly activated by cAMP 2) (Exchange protein directly activated by cAMP 2) (EPAC 2) (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; calcium-ion regulated exocytosis [GO:0017156]; cellular response to nerve growth factor stimulus [GO:1990090]; ganglion development [GO:0061548]; heart development [GO:0007507]; hormone secretion [GO:0046879]; insulin secretion [GO:0030073]; negative regulation of synaptic transmission [GO:0050805]; positive regulation of neuronal action potential [GO:1904457]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; Rap protein signal transduction [GO:0032486]; regulation of dendrite development [GO:0050773]; regulation of exocytosis [GO:0017157]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of postsynapse organization [GO:0099175]; regulation of synaptic vesicle cycle [GO:0098693]; response to benzene [GO:1901423]; spinal cord development [GO:0021510]	hit with GO BP
GN016105	Chromosome_3A	2979	7	32	33.40046995636119	0.3854377254128188	72.11359404096834	32	0.8125	78.18181818181819	15	0.8666666666666667	67.90220820189275	17	0.7647058823529411	52.476780185758514	16	0.625	methylated (>=50%)	Q8WZA2	Rap guanine nucleotide exchange factor 4 (Exchange factor directly activated by cAMP 2) (Exchange protein directly activated by cAMP 2) (EPAC 2) (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII)	adaptive immune response [GO:0002250]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of insulin secretion [GO:0032024]; Rap protein signal transduction [GO:0032486]; regulation of synaptic vesicle cycle [GO:0098693]	hit with GO BP
GN015540	Chromosome_3A	252	1	18	55.95238095238095	0.9422517656834234	0.9345794392523364	18	0	0.9345794392523364	18	0	NA	NA	NA	3.274296770352731	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016134	Chromosome_3A	393	1	9	36.6412213740458	0.6985976693659885	0.5164622336991608	9	0	0.5164622336991608	9	0	NA	NA	NA	0.5211047420531527	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015541	Chromosome_3A	9687	8	285	37.400640033033966	0.8425889697799096	1.7338374988471825	285	0	0.34572169403630076	51	0	2.1104467112205416	234	0	0.8569545154911009	52	0	unmethylated (<10%)	A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)	cell migration [GO:0016477]; epidermal cell differentiation [GO:0009913]; epidermis development [GO:0008544]; epithelial cell-cell adhesion [GO:0090136]; lymph vessel development [GO:0001945]; lymph vessel morphogenesis [GO:0036303]	hit with GO BP
GN016091	Chromosome_3A	41240	15	1249	36.87924345295829	0.891288186241806	0.8185426649939329	834	0	0.537889574434425	89	0	0.860479409956976	745	0	2.905100064557779	43	0	unmethylated (<10%)	A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)	cell migration [GO:0016477]; epidermal cell differentiation [GO:0009913]; epidermis development [GO:0008544]; epithelial cell-cell adhesion [GO:0090136]; lymph vessel development [GO:0001945]; lymph vessel morphogenesis [GO:0036303]	hit with GO BP
GN015542	Chromosome_3A	2066	5	38	35.14036786060019	0.6001773591829246	0.12631578947368421	38	0	0.1257071024512885	24	0	0.12755102040816327	14	0	0.38593481989708406	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015543	Chromosome_3A	363	1	10	41.59779614325069	0.6375131717597471	0.4166666666666667	10	0	0.4166666666666667	10	0	NA	NA	NA	1.1428571428571428	51	0	unmethylated (<10%)	P71359	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN016083	Chromosome_3A	411	1	21	45.25547445255474	1.069119286510591	0.8700380641653073	21	0	0.8700380641653073	21	0	NA	NA	NA	0.5410723069355632	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015545	Chromosome_3A	198	1	9	51.515151515151516	0.6875	0	9	0	0	9	0	NA	NA	NA	0.6278339727938612	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015546	Chromosome_3A	606	1	12	45.70957095709571	0.37969924812030076	0.9174311926605505	12	0	0.9174311926605505	12	0	NA	NA	NA	0.7142857142857143	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015547	Chromosome_3A	16777	14	490	37.444119926089286	0.8335526030945579	0.7989620322316306	468	0.004273504273504274	0.5888025988528501	296	0	1.2308334202565974	172	0.011627906976744186	0.24449877750611246	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016093	Chromosome_3A	210	1	6	35.714285714285715	0.9	0.8902077151335311	6	0	0.8902077151335311	6	0	NA	NA	NA	0.6147540983606558	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016080	Chromosome_3A	1558	2	41	36.2002567394095	0.8081730769230769	0.5198663200891199	41	0	0.5819592628516004	15	0	0.4813477737665463	26	0	1.7302052785923754	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016092	Chromosome_3A	477	1	12	46.121593291404615	0.4732142857142857	1.1904761904761905	12	0	1.1904761904761905	12	0	NA	NA	NA	0.7530120481927711	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015548	Chromosome_3A	4869	12	108	34.07270486752927	0.7651449673921584	0.4341785342132685	108	0	0.3643724696356275	53	0	0.48661800486618007	55	0	0.7494145199063232	59	0	unmethylated (<10%)	Q8TER0	Sushi, nidogen and EGF-like domain-containing protein 1 (Insulin-responsive sequence DNA-binding protein 1) (IRE-BP1)	cell adhesion mediated by integrin [GO:0033627]; cell-matrix adhesion [GO:0007160]	hit with GO BP
GN016073	Chromosome_3A	6665	8	190	35.28882220555139	0.9165291529152916	0.6305561298325408	190	0	0.8202323991797676	61	0	0.5483106105512745	129	0	0.8148631029986962	56	0	unmethylated (<10%)	Q92178	Calpain-2 catalytic subunit (EC 3.4.22.53) (Calcium-activated neutral proteinase 2) (CANP 2) (Calpain M-type) (Calpain-2 large subunit) (Millimolar-calpain) (M-calpain)	cellular response to amino acid stimulus [GO:0071230]; proteolysis [GO:0006508]	hit with GO BP
GN016074	Chromosome_3A	16816	11	438	36.21550903901046	0.7944925997626254	0.6567388940015059	423	0	0.8232065856526852	57	0	0.6368531959728401	366	0	0.6350166313879649	56	0	unmethylated (<10%)	A6QP74	Calcitonin gene-related peptide type 1 receptor (CGRP type 1 receptor) (Calcitonin receptor-like receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; angiogenesis [GO:0001525]; cell surface receptor signaling pathway [GO:0007166]; receptor internalization [GO:0031623]	hit with GO BP
GN015550	Chromosome_3A	7463	3	84	37.15663942114431	0.32634036031683894	57.712418300653596	84	0.6309523809523809	41.27126230975828	23	0.43478260869565216	63.00028793550245	61	0.7049180327868853	0.526711813393529	58	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015551	Chromosome_3A	14019	9	312	33.50452956701619	0.7930420025456089	0.6733652480404019	312	0	0.5309734513274337	25	0	0.6873050710407762	287	0	3.166069295101553	56	0	unmethylated (<10%)	Q6NT16	MFS-type transporter SLC18B1 (Solute carrier family 18 member B1) (Vesicular polyamine transporter) (VPAT)	serotonin uptake [GO:0051610]; spermidine transport [GO:0015848]; spermine transport [GO:0000296]	hit with GO BP
GN015552	Chromosome_3A	1908	5	42	34.067085953878404	0.7595541401273885	0.4656160458452722	42	0	0.49261083743842365	22	0	0.44472681067344344	20	0	0.54421768707483	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016079	Chromosome_3A	800	3	33	39.125	1.0784313725490196	0.5738880918220947	33	0	0.45126353790613716	28	0	1.048951048951049	5	0	0.779510022271715	52	0	unmethylated (<10%)	P11230	Acetylcholine receptor subunit beta	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic cation transport [GO:0006812]; monoatomic ion transmembrane transport [GO:0034220]; muscle cell development [GO:0055001]; muscle contraction [GO:0006936]; nervous system process [GO:0050877]; neuromuscular synaptic transmission [GO:0007274]; postsynaptic membrane organization [GO:0001941]; regulation of membrane potential [GO:0042391]; signal transduction [GO:0007165]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN015553	Chromosome_3A	4154	3	41	34.64130958112663	0.33265752568459706	85.29528339278636	41	0.926829268292683	82.9126213592233	12	1	85.90637450199203	29	0.896551724137931	89.19425359150532	23	0.9565217391304348	methylated (>=50%)	G5EBI4	Epoxide hydrolase 1 (EC 3.3.2.10) (CEEH1)	lipid metabolic process [GO:0006629]	hit with GO BP
GN016077	Chromosome_3A	195	1	9	54.35897435897436	0.6283566058002148	92.71523178807946	9	1	92.71523178807946	9	1	NA	NA	NA	75.30966143682906	33	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016071	Chromosome_3A	13902	6	255	35.83657027765789	0.5775026769494978	1.0154241645244215	181	0	1.059001512859304	170	0	0.3929273084479371	11	0	48.178867652362065	50	0.54	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN015556	Chromosome_3A	13896	4	257	36.053540587219345	0.5753226176715788	1.060977031596129	183	0	1.030169242089772	175	0	1.6548463356973995	8	0	2.147239263803681	47	0	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN015557	Chromosome_3A	9737	3	181	36.06860429290336	0.5723348502311069	94.14506500940388	179	1	97.2193074501574	39	1	93.57744841615809	140	1	2.1651270207852193	58	0.017241379310344827	methylated (>=50%)	Q8VHR5	Transcriptional repressor p66-beta (GATA zinc finger domain-containing protein 2B) (p66/p68)	chromatin remodeling [GO:0006338]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of cell fate specification [GO:0042659]; regulation of stem cell differentiation [GO:2000736]	hit with GO BP
GN016067	Chromosome_3A	14843	10	223	35.713804486963554	0.48467158778354114	90.92798195095885	221	0.9909502262443439	93.42417061611374	25	1	90.64995051138239	196	0.9897959183673469	82.4390243902439	7	1	methylated (>=50%)	Q96PU5	E3 ubiquitin-protein ligase NEDD4-like (EC 2.3.2.26) (EC 2.3.2.36) (HECT-type E3 ubiquitin transferase NED4L) (NEDD4.2) (Nedd4-2)	monoatomic ion transmembrane transport [GO:0034220]; negative regulation of potassium ion export across plasma membrane [GO:1903765]; negative regulation of potassium ion transmembrane transport [GO:1901380]; negative regulation of protein localization to cell surface [GO:2000009]; negative regulation of sodium ion import across plasma membrane [GO:1903783]; negative regulation of sodium ion transmembrane transport [GO:1902306]; neuromuscular junction development [GO:0007528]; neuron projection development [GO:0031175]; positive regulation of caveolin-mediated endocytosis [GO:2001288]; positive regulation of dendrite extension [GO:1903861]; positive regulation of protein catabolic process [GO:0045732]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein monoubiquitination [GO:0006513]; protein ubiquitination [GO:0016567]; receptor catabolic process [GO:0032801]; receptor internalization [GO:0031623]; regulation of dendrite morphogenesis [GO:0048814]; regulation of membrane depolarization [GO:0003254]; regulation of membrane potential [GO:0042391]; regulation of membrane repolarization [GO:0060306]; regulation of protein stability [GO:0031647]; regulation of sodium ion transmembrane transport [GO:1902305]; regulation of synapse organization [GO:0050807]; ubiquitin-dependent protein catabolic process [GO:0006511]; ventricular cardiac muscle cell action potential [GO:0086005]	hit with GO BP
GN016065	Chromosome_3A	3498	1	135	40.42309891366495	0.9447453130845516	0.48926767676767674	135	0	0.48926767676767674	135	0	NA	NA	NA	0.5588543485854	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016064	Chromosome_3A	6385	6	98	38.480814408770556	0.4147461466978987	93.47164065473925	96	1	91.26794258373205	34	1	94.500279173646	62	1	71.407110665999	31	0.8064516129032258	methylated (>=50%)	Q5ZLS2	Enhancer of mRNA-decapping protein 3 (YjeF domain-containing protein 1)	deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; P-body assembly [GO:0033962]	hit with GO BP
GN016063	Chromosome_3A	786	1	19	40.0763358778626	0.7103310502283106	96.37826961770624	19	1	96.37826961770624	19	1	NA	NA	NA	81.7287784679089	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016062	Chromosome_3A	4242	4	59	37.43517208863744	0.40047043010752686	83.01441677588467	57	0.9473684210526315	85.32719836400818	26	0.9615384615384616	80.58095750403443	31	0.9354838709677419	56.75146771037182	16	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016061	Chromosome_3A	10888	11	137	36.86627479794269	0.3763933804084961	94.90529848957085	137	1	94.57609268035809	32	1	95.00232810802422	105	1	71.95892575039494	18	0.9444444444444444	methylated (>=50%)	Q9GL21	Uveal autoantigen with coiled-coil domains and ankyrin repeats	intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; negative regulation of inflammatory response [GO:0050728]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]	hit with GO BP
GN016060	Chromosome_3A	14627	10	145	35.420797155944484	0.3189617341866992	66.82179341657208	144	0.7638888888888888	82.57211538461539	15	1	65.17924291802457	129	0.7364341085271318	51.502504173622704	21	0.5714285714285714	methylated (>=50%)	Q9P0K7	Ankycorbin (Ankyrin repeat and coiled-coil structure-containing protein) (Novel retinal pigment epithelial cell protein) (Retinoic acid-induced protein 14)	NA	hit, no GO BP
GN015562	Chromosome_3A	54532	15	650	34.67505317978435	0.3979693947840049	78.02279427125647	646	0.8978328173374613	74.44843509492047	81	0.8765432098765432	78.37837837837837	565	0.9008849557522124	11.99748743718593	26	0.07692307692307693	methylated (>=50%)	P23377	Furin (EC 3.4.21.75) (Dibasic-processing enzyme) (Paired basic amino acid residue-cleaving enzyme) (PACE) (Prohormone convertase 3)	blastocyst formation [GO:0001825]; cholesterol homeostasis [GO:0042632]; cytokine precursor processing [GO:0140447]; dibasic protein processing [GO:0090472]; negative regulation of low-density lipoprotein particle receptor catabolic process [GO:0032804]; negative regulation of transforming growth factor beta1 production [GO:0032911]; nerve growth factor production [GO:0032902]; peptide biosynthetic process [GO:0043043]; peptide hormone processing [GO:0016486]; positive regulation of cell migration [GO:0030335]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; protein maturation [GO:0051604]; protein processing [GO:0016485]; regulation of cholesterol transport [GO:0032374]; regulation of protein catabolic process [GO:0042176]; regulation of signal transduction [GO:0009966]; secretion by cell [GO:0032940]; viral life cycle [GO:0019058]; zymogen activation [GO:0031638]; zymogen inhibition [GO:0097341]	hit with GO BP
GN015563	Chromosome_3A	1480	3	20	37.432432432432435	0.39004849251528567	100	1	1	100	1	1	NA	NA	NA	NA	NA	NA	NA	O96011	Peroxisomal membrane protein 11B (Peroxin-11B) (Peroxisomal biogenesis factor 11B) (Protein PEX11 homolog beta) (PEX11-beta)	peroxisome fission [GO:0016559]; peroxisome organization [GO:0007031]; regulation of peroxisome size [GO:0044375]; signal transduction [GO:0007165]	hit with GO BP
GN015564	Chromosome_3A	3736	3	48	34.34154175588865	0.43630418280553557	0.6920415224913494	13	0	0	5	0	1.3071895424836601	8	0	39.83739837398374	44	0.4318181818181818	unmethylated (<10%)	Q0VCP2	Peroxisomal membrane protein 11A (Peroxin-11A) (Peroxisomal biogenesis factor 11A)	peroxisome fission [GO:0016559]	hit with GO BP
GN015565	Chromosome_3A	22113	19	229	34.34178989734545	0.35172338922889024	60.46955829685635	227	0.6651982378854625	53.178155774395705	47	0.6382978723404256	62.0462685122447	180	0.6722222222222223	0.4825090470446321	26	0	methylated (>=50%)	Q6P2C0	WD repeat-containing protein 93	electron transport chain [GO:0022900]	hit with GO BP
GN015566	Chromosome_3A	29901	6	757	34.41022039396676	0.8589072268693281	0.9102972399150743	756	0	0.7079646017699115	83	0	0.9266963132979487	673	0	0.6654835847382431	41	0	unmethylated (<10%)	Q5ZLD3	Kelch-like protein 13	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN015567	Chromosome_3A	180	1	7	51.111111111111114	0.6025824964131994	3.4146341463414633	7	0	3.4146341463414633	7	0	NA	NA	NA	0.7347795661301609	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015568	Chromosome_3A	1422	3	63	42.96765119549929	0.960192926045016	0.6789524733268671	63	0	0.823045267489712	36	0	0.5504587155963303	27	0	1.1796982167352539	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015569	Chromosome_3A	225	1	4	37.77777777777778	0.503919372900336	0.970873786407767	4	0	0.970873786407767	4	0	NA	NA	NA	0.60790273556231	90	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015570	Chromosome_3A	32693	8	234	36.17288104487199	0.22498379489276427	58.733567616816345	190	0.7842105263157895	54.48979591836735	13	0.9230769230769231	59.1824985607369	177	0.7740112994350282	62.62315270935961	27	0.7407407407407407	methylated (>=50%)	Q8N357	Solute carrier family 35 member F6 (ANT2-binding protein) (ANT2BP) (Transport and Golgi organization 9 homolog)	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; positive regulation of cell population proliferation [GO:0008284]	hit with GO BP
GN016052	Chromosome_3A	2954	2	95	41.40148950575491	0.7676715176715176	0.9759498082955733	88	0	0.5753739930955121	59	0	1.5915119363395225	29	0	0.5984251968503937	44	0	unmethylated (<10%)	Q21263	Paired box protein 2 homolog (Paired box transcription factor 2)	apoptotic process [GO:0006915]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016051	Chromosome_3A	386	2	21	40.67357512953368	1.3245098039215686	0.49800796812749004	21	0	0.5202913631633714	20	0	0	1	0	0.7369972625815961	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015572	Chromosome_3A	2193	4	49	35.476516187870494	0.7101449275362319	0.38128249566724437	49	0	0.1488095238095238	11	0	0.4518752824220515	38	0	0.4107066987678799	45	0	unmethylated (<10%)	A0JPI9	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN015573	Chromosome_3A	2016	4	62	35.56547619047619	0.9827187671986791	0.5978602894902454	62	0	0.4678362573099415	20	0	0.6457167455876023	42	0	8.098487095817266	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015574	Chromosome_3A	801	1	38	42.32209737827716	1.0596713549644896	2.2388059701492535	15	0	2.2388059701492535	15	0	NA	NA	NA	0.46022353714661407	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015575	Chromosome_3A	3213	1	72	39.43355119825708	0.5861356035269079	29.12621359223301	31	0.5806451612903226	29.12621359223301	31	0.5806451612903226	NA	NA	NA	59.08744086677857	49	0.8571428571428571	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015576	Chromosome_3A	417	1	2	43.645083932853716	0.10090744101633393	NA	0	NA	NA	NA	NA	NA	NA	NA	64.76821192052981	38	0.8421052631578947	NA	NA	NA	NA	no Swiss-Prot hit
GN015577	Chromosome_3A	2555	5	13	32.56360078277886	0.1922164351851852	77.33990147783251	10	0.9	90.26548672566372	5	1	61.111111111111114	5	0.8	1.656726308813784	46	0.021739130434782608	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015578	Chromosome_3A	3648	5	77	34.53947368421053	0.7103091115067163	0.2861230329041488	20	0	1.680672268907563	4	0	0	16	0	3.1847133757961785	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016049	Chromosome_3A	2178	3	51	36.54729109274564	0.7015157256536567	1.2552301255230125	18	0	1.25	15	0	1.2820512820512822	3	0	0.27991602519244224	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016050	Chromosome_3A	649	1	32	42.3728813559322	1.1002331002331003	0	4	0	0	4	0	NA	NA	NA	0.39564787339268054	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016138	Chromosome_3A	1404	3	27	32.47863247863248	0.736721407054708	0.5635566687539136	25	0	0.6273525721455459	7	0	0.5	18	0	0.42803638309256287	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016139	Chromosome_3A	2118	2	60	37.86591123701605	0.7905344879068379	0.7224462365591398	60	0	0.5656819610307983	10	0	0.7796376977757395	50	0	0.5870020964360587	54	0	unmethylated (<10%)	Q29RY7	Fibroleukin (Fibrinogen-like protein 2)	NA	hit, no GO BP
GN016140	Chromosome_3A	207	1	9	42.51207729468599	0.9703125	0.44923629829290207	7	0	0.44923629829290207	7	0	NA	NA	NA	0.5539825187738521	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015579	Chromosome_3A	333	1	8	37.23723723723724	0.72	0.3021148036253776	8	0	0.3021148036253776	8	0	NA	NA	NA	0.44240537440602984	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015580	Chromosome_3A	462	1	16	42.42424242424242	0.7881437253438532	0.7228915662650602	16	0	0.7228915662650602	16	0	NA	NA	NA	0.5714285714285714	23	0	unmethylated (<10%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN015581	Chromosome_3A	994	3	18	37.625754527162975	0.5125913192952299	1.0018785222291797	18	0	1.0148849797023005	16	0	0.8403361344537815	2	0	1.0359869138495092	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016144	Chromosome_3A	2638	4	32	32.4109173616376	0.46475880066507375	11.091234347048301	28	0	6.086956521739131	4	0	12.387387387387387	24	0	2.6156941649899395	17	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016145	Chromosome_3A	312	1	3	36.53846153846154	0.2925	0	3	0	0	3	0	NA	NA	NA	0.5277044854881267	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016143	Chromosome_3A	399	1	28	57.64411027568922	0.8512	0.6398537477148081	28	0	0.6398537477148081	28	0	NA	NA	NA	0.9157509157509157	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015589	Chromosome_3A	913	3	6	33.62541073384447	0.23671247083225305	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016146	Chromosome_3A	3996	15	133	45.970970970970974	0.6343689946167894	0.5560704355885079	100	0	0.449582530507386	77	0	0.831946755407654	23	0	0.39215686274509803	46	0	unmethylated (<10%)	Q071E0	N-lysine methyltransferase KMT5A-A (EC 2.1.1.-) (Histone-lysine N-methyltransferase KMT5A-A) (EC 2.1.1.361) (Lysine-specific methylase 5A-A) (SET domain-containing protein 8-A)	dorsal/ventral pattern formation [GO:0009953]; positive regulation of gene expression [GO:0010628]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN015583	Chromosome_3A	317	2	13	44.4794952681388	0.8295088566827697	0.9049773755656109	13	0	0.9049773755656109	13	0	NA	NA	NA	0.660377358490566	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015584	Chromosome_3A	702	3	21	39.31623931623932	0.7790519473656397	0.7502679528403001	21	0	0.6858710562414266	17	0	0.9803921568627451	4	0	0.8318478906714201	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016148	Chromosome_3A	720	1	39	53.75	0.75	0	39	0	0	39	0	NA	NA	NA	0.3010536879076769	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016149	Chromosome_3A	9847	6	119	34.90403168477709	0.39845926802479587	76.17241379310344	113	0.911504424778761	71.75257731958763	8	0.875	76.57572906867357	105	0.9142857142857143	1.005631536604988	56	0	methylated (>=50%)	Q68EY7	Coiled-coil domain-containing protein 124-A	transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN016150	Chromosome_3A	372	1	16	47.58064516129032	0.7946595460614152	1.2121212121212122	14	0	1.2121212121212122	14	0	NA	NA	NA	0.6499535747446611	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016151	Chromosome_3A	1373	2	25	38.82010196649672	0.4836823267480202	0.9482758620689655	25	0	1.0204081632653061	23	0	0	2	0	0.9447674418604651	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016152	Chromosome_3A	913	3	6	33.62541073384447	0.23671247083225305	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016153	Chromosome_3A	913	3	6	33.62541073384447	0.23671247083225305	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016154	Chromosome_3A	528	1	28	44.31818181818182	1.0914728682170542	0.4784688995215311	28	0	0.4784688995215311	28	0	NA	NA	NA	1.1398509425690486	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016155	Chromosome_3A	1455	1	77	45.9106529209622	1.0104166666666667	1.1585365853658536	77	0	1.1585365853658536	77	0	NA	NA	NA	0.6325301204819277	74	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN016160	Chromosome_3A	660	1	14	38.03030303030303	0.6079747335175681	0.1631321370309951	14	0	0.1631321370309951	14	0	NA	NA	NA	0.8465966813410092	65	0	unmethylated (<10%)	Q17QR8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN016159	Chromosome_3A	654	2	15	38.53211009174312	0.6226594731831164	65.47945205479452	15	0.8666666666666667	65.09009009009009	14	0.8571428571428571	69.53125	1	1	76.43240191927745	43	0.9069767441860465	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015595	Chromosome_3A	378	1	8	39.15343915343915	1.0518260869565217	87.76009791921665	8	1	87.76009791921665	8	1	NA	NA	NA	90.78534031413612	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016158	Chromosome_3A	720	1	29	42.22222222222222	0.9114719748559456	91.41205615194055	29	1	91.41205615194055	29	1	NA	NA	NA	81.21158911325725	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016157	Chromosome_3A	951	1	21	45.320715036803364	0.43070652173913043	82.81786941580756	21	1	82.81786941580756	21	1	NA	NA	NA	84.73451327433628	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016156	Chromosome_3A	216	1	5	47.68518518518518	0.41189931350114417	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016163	Chromosome_3A	216	1	5	47.68518518518518	0.41189931350114417	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016161	Chromosome_3A	1133	4	10	31.597528684907324	0.3590328611718478	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015596	Chromosome_3A	23242	11	269	35.6595817915842	0.36408778687478277	71.30472475075857	168	0.8452380952380952	61.302211302211305	23	0.6956521739130435	72.06417311817927	145	0.8689655172413793	NA	NA	NA	methylated (>=50%)	A2AKG8	Focadhesin	regulation of post-transcriptional gene silencing [GO:0060147]	hit with GO BP
GN016168	Chromosome_3A	369	1	21	47.696476964769644	1.0112227587106877	0.713436385255648	21	0	0.713436385255648	21	0	NA	NA	NA	26.187183033656062	34	0.14705882352941177	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016169	Chromosome_3A	389	2	6	43.44473007712082	0.3354412187410175	28.32369942196532	6	0	28.32369942196532	6	0	NA	NA	NA	2.0476190476190474	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016170	Chromosome_3A	4283	4	137	38.31426570161102	0.8727944785732348	0.580168776371308	137	0	0.9264305177111717	53	0	0.4152608357124319	84	0	0.2680965147453083	29	0	unmethylated (<10%)	Q5BK75	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 (Solute carrier family 46 member 3)	cellular response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904613]; vacuolar transmembrane transport [GO:0034486]	hit with GO BP
GN016171	Chromosome_3A	5351	3	174	38.57222948981499	0.874235574146843	2.164605137963844	174	0	0.5149812734082397	53	0	2.72640306122449	121	0	1.8414018414018414	70	0	unmethylated (<10%)	Q9DC26	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 (Solute carrier family 46 member 3)	cellular response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904613]; vacuolar transmembrane transport [GO:0034486]	hit with GO BP
GN015601	Chromosome_3A	408	1	1	35.049019607843135	0.0819277108433735	0.847457627118644	1	0	0.847457627118644	1	0	NA	NA	NA	0.6289308176100629	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015602	Chromosome_3A	2175	3	28	37.42528735632184	0.37123054697072216	0.6838905775075987	28	0	0.5902192242833052	24	0	1.5384615384615385	4	0	0.2949852507374631	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016173	Chromosome_3A	327	2	5	33.333333333333336	0.6137387387387387	0.8797653958944281	5	0	0.7575757575757576	4	0	1.2987012987012987	1	0	0.7506702412868632	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016174	Chromosome_3A	5980	3	160	35.20066889632107	0.8669839325260331	1.7232094776521272	160	0	0.823045267489712	25	0	1.858736059479554	135	0	0.6204756980351603	40	0	unmethylated (<10%)	P86880	Neuroglobin (Nitrite reductase) (EC 1.7.-.-)	cellular response to hypoxia [GO:0071456]	hit with GO BP
GN016175	Chromosome_3A	838	2	14	41.766109785202865	0.39173261210724897	4.622222222222222	14	0	4.8169556840077075	12	0	2.2988505747126435	2	0	3.597710547833197	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016176	Chromosome_3A	347	2	9	40.345821325648416	0.6437847866419295	8.778625954198473	9	0	8.043478260869565	8	0	14.0625	1	0	5.417024935511608	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016177	Chromosome_3A	995	2	43	42.21105527638191	0.9864886675428282	0.33222591362126247	43	0	0.33222591362126247	43	0	NA	NA	NA	3.893532776066872	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016178	Chromosome_3A	378	1	9	40.21164021164021	0.6040482954545454	0.5494505494505495	9	0	0.5494505494505495	9	0	NA	NA	NA	0.7818608287724785	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015607	Chromosome_3A	6848	9	196	35.83528037383178	0.8916903616698998	0.550098231827112	195	0	0.5219985085756897	33	0	0.5543613530942414	162	0	0.9493670886075949	36	0	unmethylated (<10%)	Q7M456	Ribonuclease Oy (RNase Oy) (EC 3.1.27.-)	RNA catabolic process [GO:0006401]	hit with GO BP
GN015608	Chromosome_3A	17969	14	440	35.433246146140576	0.7819715982965545	86.77858380946267	428	0.9649532710280374	80.83170890188434	32	0.875	87.08762451460409	396	0.9722222222222222	53.74449339207048	44	0.5227272727272727	methylated (>=50%)	P50991	T-complex protein 1 subunit delta (TCP-1-delta) (EC 3.6.1.-) (CCT-delta) (Chaperonin containing T-complex polypeptide 1 subunit 4) (Stimulator of TAR RNA-binding)	positive regulation of protein localization to Cajal body [GO:1904871]; positive regulation of telomerase RNA localization to Cajal body [GO:1904874]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein folding [GO:0006457]; protein stabilization [GO:0050821]; scaRNA localization to Cajal body [GO:0090666]	hit with GO BP
GN016180	Chromosome_3A	291	1	12	52.233676975945016	0.6045706371191135	98.31223628691983	12	1	98.31223628691983	12	1	NA	NA	NA	28.89390519187359	17	0.29411764705882354	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016181	Chromosome_3A	561	1	9	38.859180035650624	0.43828125	3.5502958579881656	9	0	3.5502958579881656	9	0	NA	NA	NA	0.47393364928909953	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016182	Chromosome_3A	1011	1	27	47.97230464886251	0.4843672368514444	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9125067096081588	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016183	Chromosome_3A	192	1	9	41.145833333333336	1.1091142490372272	0.2178649237472767	9	0	0.2178649237472767	9	0	NA	NA	NA	0.6045949214026602	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016184	Chromosome_3A	1507	2	65	44.658261446582614	0.8654033041788144	0.6827731092436975	65	0	0.7202216066481995	63	0	0	2	0	0.43642711667151585	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016185	Chromosome_3A	7833	8	255	38.59313162262224	0.8762990397371913	0.8298052497883149	255	0	0.5490570541895441	90	0	0.9841228185277523	165	0	0.580046403712297	51	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN016186	Chromosome_3A	480	1	0	43.125	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.345565749235474	70	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016187	Chromosome_3A	1584	5	4	42.04545454545455	0.06220058116704626	0	2	0	0	1	0	0	1	0	0.9776536312849162	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016188	Chromosome_3A	1776	7	10	41.9481981981982	0.1408406026962728	0	1	0	NA	NA	NA	0	1	0	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016189	Chromosome_3A	4051	9	121	36.65761540360405	0.8986477319810653	0.6838422391857506	121	0	0.5886200130804448	54	0	0.7739938080495357	67	0	0.5167173252279635	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016190	Chromosome_3A	2046	1	91	40.27370478983382	1.0968635121123573	0.524704853519895	70	0	0.524704853519895	70	0	NA	NA	NA	0.5159958720330238	29	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN015617	Chromosome_3A	3901	2	71	34.29889771853371	0.619245112593679	1.1107863197895351	57	0	0.5154639175257731	5	0	1.1465757669662224	52	0	10.798722044728434	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015616	Chromosome_3A	2046	1	89	40.469208211143695	1.062441654219567	0.7807807807807807	63	0	0.7807807807807807	63	0	NA	NA	NA	0.6085192697768763	25	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN016192	Chromosome_3A	3394	2	63	35.4449027695934	0.5922292450269495	0.6304728546409807	48	0	0.32362459546925565	7	0	0.6677140612725845	41	0	0.6500541711809318	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016193	Chromosome_3A	2046	1	85	40.27370478983382	1.0246937585067082	0.7656967840735069	85	0	0.7656967840735069	85	0	NA	NA	NA	1.188564086090588	49	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN016194	Chromosome_3A	1265	2	24	38.18181818181818	0.52218782249742	33.493282149712094	24	0.375	22.727272727272727	11	0.36363636363636365	40.705128205128204	13	0.38461538461538464	67.7723763225622	60	0.7333333333333333	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016195	Chromosome_3A	956	2	19	34.72803347280335	0.6645933189418609	96.56067488643738	19	1	97.61467889908256	14	1	94.01330376940133	5	1	89.55771305285869	40	1	methylated (>=50%)	P55954	Cytochrome c oxidase subunit 5A, mitochondrial (Cytochrome c oxidase polypeptide Va)	mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	hit with GO BP
GN016196	Chromosome_3A	198	1	14	45.45454545454545	1.596774193548387	0.6880733944954128	14	0	0.6880733944954128	14	0	NA	NA	NA	0.6439742410303588	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016197	Chromosome_3A	321	1	10	44.23676012461059	0.6430288461538461	0	10	0	0	10	0	NA	NA	NA	0.44726052925829296	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016198	Chromosome_3A	3458	3	52	37.33371891266628	0.43166890724025353	75.68377669539153	52	0.9038461538461539	78.4919653893696	20	0.9	74.46236559139786	32	0.90625	3.054662379421222	67	0	methylated (>=50%)	P49914	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (5,10-methenyl-tetrahydrofolate synthetase) (MTHFS) (Methenyl-THF synthetase)	folic acid catabolic process [GO:0046657]; folic acid metabolic process [GO:0046655]; folic acid-containing compound biosynthetic process [GO:0009396]; formate metabolic process [GO:0015942]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	hit with GO BP
GN016199	Chromosome_3A	1821	1	38	39.81328940142779	0.5306025426717991	NA	0	NA	NA	NA	NA	NA	NA	NA	2.3255813953488373	37	0	NA	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN016200	Chromosome_3A	4241	4	64	38.38717283659514	0.4109496124031008	90.92651757188499	64	1	91.74573055028463	37	1	89.23679060665361	27	1	95.22742549854358	53	1	methylated (>=50%)	Q9NPJ1	Molecular chaperone MKKS (Bardet-Biedl syndrome 6 protein) (McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin)	brain morphogenesis [GO:0048854]; cerebral cortex development [GO:0021987]; chaperone-mediated protein complex assembly [GO:0051131]; cilium assembly [GO:0060271]; convergent extension involved in gastrulation [GO:0060027]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; determination of left/right symmetry [GO:0007368]; developmental process [GO:0032502]; fat cell differentiation [GO:0045444]; gonad development [GO:0008406]; heart development [GO:0007507]; heart looping [GO:0001947]; hippocampus development [GO:0021766]; melanosome transport [GO:0032402]; negative regulation of appetite by leptin-mediated signaling pathway [GO:0038108]; photoreceptor cell maintenance [GO:0045494]; pigment granule aggregation in cell center [GO:0051877]; protein folding [GO:0006457]; regulation of cilium beat frequency involved in ciliary motility [GO:0060296]; sensory perception of smell [GO:0007608]; social behavior [GO:0035176]; spermatid development [GO:0007286]; striatum development [GO:0021756]	hit with GO BP
GN016201	Chromosome_3A	23656	11	368	36.49391274940818	0.4699965662974537	84.81647742276208	358	0.8938547486033519	89.75990743419149	58	0.9137931034482759	83.92940565792888	300	0.89	78.45057880676758	72	0.7222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016202	Chromosome_3A	369	1	20	55.28455284552845	0.7509157509157509	0.21505376344086022	20	0	0.21505376344086022	20	0	NA	NA	NA	0.599250936329588	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016203	Chromosome_3A	1190	2	47	49.831932773109244	0.6368563685636857	19.73125884016973	44	0.09090909090909091	20.11577424023155	41	0.0975609756097561	3.125	3	0	2.4485981308411215	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016204	Chromosome_3A	369	1	20	54.74254742547426	0.759493670886076	0.186219739292365	19	0	0.186219739292365	19	0	NA	NA	NA	0.6218905472636815	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016205	Chromosome_3A	1540	2	79	44.15584415584416	1.05245856258002	0.7131940906775344	53	0	0.9966777408637874	29	0	0.2635046113306983	24	0	0.6906077348066298	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015630	Chromosome_3A	3856	4	84	37.52593360995851	0.6202775990440298	0.9115545700911555	81	0	0.5118362124120281	25	0	1.1618589743589745	56	0	9.183673469387756	35	0.08571428571428572	unmethylated (<10%)	Q40302	Calmodulin (CaM)	NA	hit, no GO BP
GN015631	Chromosome_3A	41898	30	653	33.502792496061865	0.5593345456060539	87.0490539767783	582	0.9604810996563574	91.54663923182441	95	0.9894736842105263	86.28631248364303	487	0.9548254620123203	4.44104134762634	45	0.022222222222222223	methylated (>=50%)	Q6ZU80	Centrosomal protein 128 (Cep128) (Centrosomal protein of 128 kDa)	intracellular protein localization [GO:0008104]; motile cilium assembly [GO:0044458]; negative regulation of cilium assembly [GO:1902018]; positive regulation of protein localization [GO:1903829]; regulation of gene expression [GO:0010468]; regulation of transforming growth factor beta receptor signaling pathway [GO:0017015]; sperm flagellum assembly [GO:0120316]	hit with GO BP
GN016207	Chromosome_3A	1654	3	17	33.796856106408704	0.3604409691065248	91.02447869446962	17	1	86.41975308641975	6	1	92.93966623876766	11	1	33.941605839416056	32	0.3125	methylated (>=50%)	Q8N5M4	Tetratricopeptide repeat protein 9C (TPR repeat protein 9C)	NA	hit, no GO BP
GN016208	Chromosome_3A	2394	4	47	35.58897243107769	0.6263980359300105	91.5538362346873	47	0.9787234042553191	93.92265193370166	3	1	91.40705237932215	44	0.9772727272727273	83.56164383561644	17	0.8823529411764706	methylated (>=50%)	Q3T0V3	Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (eIF-3 p25)	formation of cytoplasmic translation initiation complex [GO:0001732]; regulation of translational initiation [GO:0006446]; translational initiation [GO:0006413]	hit with GO BP
GN015634	Chromosome_3A	438	1	20	44.74885844748859	0.9237583043340715	93.96378269617706	20	1	93.96378269617706	20	1	NA	NA	NA	84.53473132372216	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015635	Chromosome_3A	6496	4	94	32.573891625615765	0.545892113214969	74.6384075612201	93	0.9032258064516129	80.75657894736842	9	1	74.05490196078432	84	0.8928571428571429	89.53488372093024	13	1	methylated (>=50%)	Q8NI22	Multiple coagulation factor deficiency protein 2 (Neural stem cell-derived neuronal survival protein)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN015636	Chromosome_3A	1271	2	43	36.821400472069236	1.0017045454545455	0.478885502829778	43	0	0.6749156355455568	21	0	0.35511363636363635	22	0	0.4145408163265306	46	0	unmethylated (<10%)	L8E946	Homeobox protein unc-42 (Uncoordinated protein 42)	axon development [GO:0061564]; axon guidance [GO:0007411]; larval locomotory behavior [GO:0008345]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron fate specification [GO:0048665]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; synapse organization [GO:0050808]	hit with GO BP
GN016210	Chromosome_3A	30580	24	500	36.47155003270111	0.4916818303401197	85.19445941234271	497	0.9517102615694165	92.52003561887801	115	0.991304347826087	83.60839052980643	382	0.9397905759162304	91.97776012708499	25	1	methylated (>=50%)	Q641K1	Cytosolic carboxypeptidase 1 (EC 3.4.17.-) (EC 3.4.17.24) (ATP/GTP-binding protein 1) (Nervous system nuclear protein induced by axotomy protein 1) (Protein deglutamylase CCP1)	adult walking behavior [GO:0007628]; anterograde axonal transport of mitochondrion [GO:0098957]; axonal transport [GO:0098930]; C-terminal protein deglutamylation [GO:0035609]; central nervous system neuron development [GO:0021954]; cerebellar Purkinje cell differentiation [GO:0021702]; cerebellar Purkinje cell layer development [GO:0021680]; cerebellum development [GO:0021549]; eye photoreceptor cell differentiation [GO:0001754]; mitochondrion organization [GO:0007005]; negative regulation of cell population proliferation [GO:0008285]; neuromuscular process [GO:0050905]; olfactory bulb development [GO:0021772]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; protein deglutamylation [GO:0035608]; protein side chain deglutamylation [GO:0035610]; proteolysis [GO:0006508]; retina development in camera-type eye [GO:0060041]; retrograde axonal transport of mitochondrion [GO:0098958]	hit with GO BP
GN015637	Chromosome_3A	609	1	14	41.37931034482759	0.5877162749017716	72.83018867924528	12	0.75	72.83018867924528	12	0.75	NA	NA	NA	63.609756097560975	47	0.723404255319149	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015638	Chromosome_3A	9753	5	162	34.06131446734338	0.5731414815911129	78.63794639242045	162	0.9074074074074074	82.8982898289829	20	0.85	78.21676454885211	142	0.9154929577464789	0.7709251101321586	35	0	methylated (>=50%)	P0CB95	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Complex I-18 kDa) (CI-18 kDa) (NADH-ubiquinone oxidoreductase 18 kDa subunit)	brain development [GO:0007420]; electron transport chain [GO:0022900]; mitochondrial respiratory chain complex I assembly [GO:0032981]; reactive oxygen species metabolic process [GO:0072593]; response to cAMP [GO:0051591]	hit with GO BP
GN015639	Chromosome_3A	4628	4	117	35.82541054451167	0.788229745309716	0.5843456866061818	117	0	0.37303490540900613	65	0	0.8727272727272727	52	0	0.704225352112676	59	0	unmethylated (<10%)	O08762	Neurotrypsin (EC 3.4.21.-) (Brain-specific serine protease 3) (BSSP-3) (Motopsin) (Serine protease 12)	exocytosis [GO:0006887]; proteolysis [GO:0006508]; zymogen activation [GO:0031638]	hit with GO BP
GN015640	Chromosome_3A	14555	7	405	35.22500858811405	0.9027054632992961	0.5879033016649422	404	0	0.9066183136899365	88	0	0.5291594719545479	316	0	0.3818118708781673	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016214	Chromosome_3A	1347	1	59	42.68745360059391	0.9625390596613618	1.045436268596703	59	0	1.045436268596703	59	0	NA	NA	NA	0.3025064822817632	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016215	Chromosome_3A	1176	1	42	44.04761904761905	0.7398774660335246	0.6458022851465475	42	0	0.6458022851465475	42	0	NA	NA	NA	0.6289308176100629	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016216	Chromosome_3A	192	1	1	56.770833333333336	0.36923076923076925	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4168113928447378	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016217	Chromosome_3A	1499	3	168	54.76984656437625	1.4952618453865336	0.5936675461741425	78	0	0.615595075239398	74	0	0	4	0	0.6958942240779401	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016218	Chromosome_3A	8590	6	102	33.91152502910361	0.4145517515471527	75.1530166132323	102	0.8431372549019608	44.97716894977169	9	0.6666666666666666	77.21046077210461	93	0.8602150537634409	0.9160756501182034	57	0	methylated (>=50%)	Q6AXS8	Tubulin polyglutamylase complex subunit 2 (PGs2)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN015646	Chromosome_3A	938	2	41	45.20255863539445	0.8810942082111437	1.098901098901099	41	0	1.1523687580025608	40	0	0	1	0	1.076555023923445	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016220	Chromosome_3A	408	1	20	51.470588235294116	0.821256038647343	0.9146341463414634	20	0	0.9146341463414634	20	0	NA	NA	NA	15.74074074074074	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015647	Chromosome_3A	285	1	1	44.56140350877193	2.261904761904762	3.4482758620689653	1	0	3.4482758620689653	1	0	NA	NA	NA	15.74074074074074	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016219	Chromosome_3A	2145	2	89	39.95337995337995	1.03988953165343	4.080351537978657	89	0	3.474903474903475	71	0	5.524079320113314	18	0	2.611940298507463	40	0	unmethylated (<10%)	D2GXS7	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (RING-type E3 ubiquitin transferase TRIM2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN015648	Chromosome_3A	4085	3	118	36.18115055079559	0.8862279192222271	3.1741043368950344	118	0	3.549899531145345	66	0	2.841918294849023	52	0	0.6141618497109826	43	0	unmethylated (<10%)	Q922Y2	Tripartite motif-containing protein 59 (EC 2.3.2.27) (RING finger protein 1)	antiviral innate immune response [GO:0140374]; host-mediated suppression of symbiont invasion [GO:0046597]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; protein ubiquitination [GO:0016567]	hit with GO BP
GN015649	Chromosome_3A	528	1	15	40.71969696969697	0.6963249516441006	0.508130081300813	15	0	0.508130081300813	15	0	NA	NA	NA	0.3972194637537239	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015650	Chromosome_3A	213	1	9	41.31455399061033	1.0158982511923689	0.8119079837618404	9	0	0.8119079837618404	9	0	NA	NA	NA	0.4692387904066736	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015651	Chromosome_3A	739	2	25	52.90933694181326	0.5085608896718784	0	11	0	0	11	0	NA	NA	NA	0.33136966126656847	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015652	Chromosome_3A	402	1	7	42.78606965174129	0.3806818181818182	77.28706624605678	7	1	77.28706624605678	7	1	NA	NA	NA	67.94682422451994	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015653	Chromosome_3A	2228	3	85	39.76660682226212	0.9779600099148972	0.5559968228752978	85	0	0.6222547584187409	54	0	0.3827751196172249	31	0	1.7749785284855426	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016221	Chromosome_3A	1896	2	75	39.60970464135021	1.0135568575460805	0.5565319273579379	75	0	0.5985783763561542	52	0	0.4048582995951417	23	0	3.7974683544303796	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015654	Chromosome_3A	7034	4	113	36.28092123969292	0.49107608435089695	61.31282418172062	113	0.672566371681416	89.9556272690601	61	1	38.49614395886889	52	0.28846153846153844	41.3840830449827	28	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016238	Chromosome_3A	18884	13	230	36.59711925439525	0.36379998656476664	86.85756786909631	229	0.9606986899563319	90.92144604512096	97	0.979381443298969	85.32664345689126	132	0.946969696969697	69.02709359605912	31	0.967741935483871	methylated (>=50%)	Q6GQQ9	OTU domain-containing protein 7B (EC 3.4.19.12) (Cellular zinc finger anti-NF-kappa-B protein) (Cezanne) (Zinc finger A20 domain-containing protein 1) (Zinc finger protein Cezanne)	mucosal immune response [GO:0002385]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of TORC2 signaling [GO:1904515]; protein deubiquitination [GO:0016579]; protein deubiquitination involved in ubiquitin-dependent protein catabolic process [GO:0071947]; protein K11-linked deubiquitination [GO:0035871]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]	hit with GO BP
GN016237	Chromosome_3A	6721	5	100	36.795119773843176	0.4406779661016949	71.82654402102497	99	0.8282828282828283	66.28757108042242	31	0.7419354838709677	72.89543815645085	68	0.8676470588235294	0.5612244897959183	49	0	methylated (>=50%)	Q8BNU0	Armadillo repeat-containing protein 6	hematopoietic progenitor cell differentiation [GO:0002244]	hit with GO BP
GN015657	Chromosome_3A	4209	4	122	36.92088382038489	0.8651622164413474	0.4735020943361865	122	0	0.6463527239150508	71	0	0.22301516503122212	51	0	0.8268482490272373	69	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN016235	Chromosome_3A	327	1	11	39.14373088685015	0.9001501501501501	0.2364066193853428	11	0	0.2364066193853428	11	0	NA	NA	NA	0.45161290322580644	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016234	Chromosome_3A	5968	5	77	35.120643431635386	0.421046073216879	40.197313182199835	77	0.4025974025974026	40.94223219293326	36	0.3611111111111111	39.751761153975174	41	0.43902439024390244	32.388663967611336	30	0.03333333333333333	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016233	Chromosome_3A	7348	7	117	37.95590636908002	0.44751981710173716	69.24213157595727	117	0.905982905982906	63	22	0.8636363636363636	70.13374886378392	95	0.9157894736842105	63.408723747980616	31	0.7741935483870968	methylated (>=50%)	Q501Z5	5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial (EC 3.6.1.-) (GTP-binding protein 3) (tRNA modification GTPase GTPBP3, mitochondrial)	embryonic organ development [GO:0048568]; mitochondrial alanyl-tRNA aminoacylation [GO:0070143]; mitochondrial leucyl-tRNA aminoacylation [GO:0070153]; mitochondrial lysyl-tRNA aminoacylation [GO:0070154]; mitochondrial methionyl-tRNA aminoacylation [GO:0070155]; mitochondrial tRNA modification [GO:0070900]; mitochondrial tRNA wobble uridine modification [GO:0070899]; mitochondrial tryptophanyl-tRNA aminoacylation [GO:0070183]; mitochondrial tyrosyl-tRNA aminoacylation [GO:0070184]; tRNA methylation [GO:0030488]; tRNA stabilization [GO:0036416]; tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN015661	Chromosome_3A	530	2	15	40.943396226415096	0.6859361518550474	0.5376344086021505	15	0	0.5376344086021505	15	0	NA	NA	NA	4.720692368214005	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015662	Chromosome_3A	2791	2	108	39.66320315299176	0.9848785843113679	1.1140080587817018	108	0	0.42643923240938164	16	0	1.2	92	0	0.82319255547602	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016231	Chromosome_3A	567	1	28	38.80070546737213	1.3253193087903832	0.356718192627824	28	0	0.356718192627824	28	0	NA	NA	NA	0.8587041373926619	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016230	Chromosome_3A	198	1	8	52.02020202020202	0.6041189931350115	0	8	0	0	8	0	NA	NA	NA	2.286902286902287	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016229	Chromosome_3A	5911	2	153	34.41042124851971	0.8747389710113949	0.6821282401091405	151	0	1.36986301369863	6	0	0.6609478273098017	145	0	0.6334125098970704	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016228	Chromosome_3A	4163	4	117	38.097525822723995	0.7749429219203691	0.6600660066006601	115	0	0.17452006980802792	16	0	0.730110775427996	99	0	4.167801688913102	82	0	unmethylated (<10%)	P15428	15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC 1.1.1.141) (Eicosanoid/docosanoid dehydrogenase [NAD(+)]) (EC 1.1.1.-, EC 1.1.1.232) (Prostaglandin dehydrogenase 1) (Short chain dehydrogenase/reductase family 36C member 1)	ductus arteriosus closure [GO:0097070]; female pregnancy [GO:0007565]; kidney development [GO:0001822]; lipoxin biosynthetic process [GO:2001301]; lipoxygenase pathway [GO:0019372]; negative regulation of cell cycle [GO:0045786]; ovulation [GO:0030728]; parturition [GO:0007567]; positive regulation of apoptotic process [GO:0043065]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; prostaglandin catabolic process [GO:1905344]; prostaglandin metabolic process [GO:0006693]; regulation of prostaglandin catabolic process [GO:1905828]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to lipopolysaccharide [GO:0032496]; thrombin-activated receptor signaling pathway [GO:0070493]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN016227	Chromosome_3A	717	1	30	42.11994421199442	0.9475353508656006	0.6407097092163627	30	0	0.6407097092163627	30	0	NA	NA	NA	0.49261083743842365	61	0	unmethylated (<10%)	Q642J4	Protein IMPACT (Imprinted and ancient gene protein homolog)	cellular response to amino acid starvation [GO:0034198]; GCN2-mediated signaling [GO:0140469]; intracellular signal transduction [GO:0035556]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron projection extension [GO:1990138]; positive regulation of neuron differentiation [GO:0045666]; regulation of cytoplasmic translational initiation in response to stress [GO:1990611]; regulation of translational initiation [GO:0006446]	hit with GO BP
GN015665	Chromosome_3A	17777	7	624	38.64544073803229	0.9403746969363015	2.51850034752034	539	0	0.9628610729023384	30	0	2.616822429906542	509	0	0.6058158319870759	44	0	unmethylated (<10%)	P70684	15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC 1.1.1.141) (Eicosanoid/docosanoid dehydrogenase [NAD(+)]) (EC 1.1.1.-, EC 1.1.1.232) (Prostaglandin dehydrogenase 1)	ductus arteriosus closure [GO:0097070]; female pregnancy [GO:0007565]; negative regulation of cell cycle [GO:0045786]; ovulation [GO:0030728]; parturition [GO:0007567]; prostaglandin metabolic process [GO:0006693]; regulation of prostaglandin catabolic process [GO:1905828]; thrombin-activated receptor signaling pathway [GO:0070493]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN016226	Chromosome_3A	2136	4	45	36.09550561797753	0.6472727272727272	68.48156915793034	45	0.7111111111111111	53.593179049939096	16	0.5	74.20411985018727	29	0.8275862068965517	0.5679129200189305	47	0	methylated (>=50%)	Q9D6N1	Carbonic anhydrase 13 (EC 4.2.1.1) (Carbonate dehydratase XIII) (Carbonic anhydrase XIII) (CA-XIII)	NA	hit, no GO BP
GN015667	Chromosome_3A	2649	7	79	39.67534918837297	0.7580634644642469	0.6578947368421053	79	0	0.6024096385542169	47	0	0.7165605095541401	32	0	0.7892057026476579	56	0	unmethylated (<10%)	Q8UWA5	Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase II) (Carbonic anhydrase II) (CA-II)	carbon dioxide transport [GO:0015670]; regulation of pH [GO:0006885]	hit with GO BP
GN016241	Chromosome_3A	988	2	25	49.392712550607285	0.4153214958299704	0.17889087656529518	16	0	0.17889087656529518	16	0	NA	NA	NA	0.9515570934256056	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016242	Chromosome_3A	528	1	5	36.553030303030305	0.29431438127090304	36.0655737704918	5	0.2	36.0655737704918	5	0.2	NA	NA	NA	14.88673139158576	22	0.045454545454545456	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016243	Chromosome_3A	228	1	4	56.14035087719298	0.27086427086427084	0	4	0	0	4	0	NA	NA	NA	0.8345606283750614	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016244	Chromosome_3A	198	1	10	60.60606060606061	0.61875	1.3071895424836601	10	0	1.3071895424836601	10	0	NA	NA	NA	1.1152416356877324	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016245	Chromosome_3A	336	1	6	54.464285714285715	0.28940568475452194	0	6	0	0	6	0	NA	NA	NA	0.9900990099009901	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016246	Chromosome_3A	631	2	14	55.467511885895405	0.3599690314168127	1.71990171990172	14	0	1.7094017094017093	12	0	1.7857142857142858	2	0	0.8695652173913043	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015673	Chromosome_3A	24691	13	456	35.02490786116399	0.6022190290283785	87.52019102465061	450	0.9644444444444444	76.32135306553911	24	0.8333333333333334	88.1074688643335	426	0.971830985915493	49.340263894442224	48	0.625	methylated (>=50%)	Q6IR75	COP9 signalosome complex subunit 2 (Signalosome subunit 2)	NA	hit, no GO BP
GN004995	Chromosome_3A	456	1	18	52.85087719298246	0.5653671304587409	94.58333333333333	15	1	94.58333333333333	15	1	NA	NA	NA	87.05516014234875	56	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015674	Chromosome_3A	462	1	9	41.125541125541126	0.4725	0.24096385542168675	9	0	0.24096385542168675	9	0	NA	NA	NA	1.1727912431587177	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017759	Chromosome_3A	18443	15	394	35.558206365558746	0.6863117001655488	0.8313717634096259	380	0	0.5060088551549652	70	0	0.9327377824487652	310	0	0.8440243079000675	47	0	unmethylated (<10%)	Q9Y3Q0	N-acetylated-alpha-linked acidic dipeptidase 2 (EC 3.4.17.21) (Glutamate carboxypeptidase III) (GCPIII) (N-acetylated-alpha-linked acidic dipeptidase II) (NAALADase II)	proteolysis [GO:0006508]	hit with GO BP
GN015675	Chromosome_3A	2523	5	76	36.504161712247324	0.9046850672328379	0.6097560975609756	76	0	0.6955945677376615	57	0	0.3700277520814061	19	0	0.7936507936507936	9	0	unmethylated (<10%)	O35245	Polycystin-2 (Polycystic kidney disease 2 protein homolog) (Transient receptor potential cation channel subfamily P member 2)	aorta development [GO:0035904]; branching involved in ureteric bud morphogenesis [GO:0001658]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cell surface receptor signaling pathway via JAK-STAT [GO:0007259]; cellular response to calcium ion [GO:0071277]; cellular response to cAMP [GO:0071320]; cellular response to fluid shear stress [GO:0071498]; cellular response to hydrostatic pressure [GO:0071464]; cellular response to osmotic stress [GO:0071470]; cilium organization [GO:0044782]; detection of mechanical stimulus [GO:0050982]; detection of nodal flow [GO:0003127]; determination of left/right symmetry [GO:0007368]; determination of liver left/right asymmetry [GO:0071910]; embryonic placenta development [GO:0001892]; heart development [GO:0007507]; heart looping [GO:0001947]; intracellular calcium ion homeostasis [GO:0006874]; kidney development [GO:0001822]; liver development [GO:0001889]; mesonephric duct development [GO:0072177]; metanephric ascending thin limb development [GO:0072218]; metanephric cortex development [GO:0072214]; metanephric cortical collecting duct development [GO:0072219]; metanephric distal tubule development [GO:0072235]; metanephric mesenchyme development [GO:0072075]; metanephric part of ureteric bud development [GO:0035502]; metanephric S-shaped body morphogenesis [GO:0072284]; metanephric smooth muscle tissue development [GO:0072208]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; negative regulation of ryanodine-sensitive calcium-release channel activity [GO:0060315]; neural tube development [GO:0021915]; placenta blood vessel development [GO:0060674]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of gene expression [GO:0010628]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway [GO:1900738]; positive regulation of transcription by RNA polymerase II [GO:0045944]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein heterotetramerization [GO:0051290]; protein homotetramerization [GO:0051289]; protein tetramerization [GO:0051262]; regulation of calcium ion import [GO:0090279]; regulation of cell cycle [GO:0051726]; regulation of cell population proliferation [GO:0042127]; release of sequestered calcium ion into cytosol [GO:0051209]; renal artery morphogenesis [GO:0061441]; renal tubule morphogenesis [GO:0061333]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; spinal cord development [GO:0021510]; transmembrane transport [GO:0055085]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN015676	Chromosome_3A	1118	2	53	44.09660107334526	0.9801177716024878	1.0309278350515463	7	0	1.0309278350515463	7	0	NA	NA	NA	0.690846286701209	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016249	Chromosome_3A	411	1	22	50.12165450121655	0.8526166902404526	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3460207612456747	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015678	Chromosome_3A	2169	2	67	38.773628400184414	0.8224837000814996	0.45118949958982774	67	0	0.4919499105545617	63	0	0	4	0	0.5461993627674101	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016252	Chromosome_3A	975	1	32	37.23076923076923	0.9476945507563331	0.3207184092366902	32	0	0.3207184092366902	32	0	NA	NA	NA	0.3615546851461284	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016253	Chromosome_3A	258	1	15	41.86046511627907	1.3846153846153846	0.21367521367521367	15	0	0.21367521367521367	15	0	NA	NA	NA	1.968503937007874	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015680	Chromosome_3A	156	1	6	57.05128205128205	1.4444444444444444	1.2396694214876034	6	0	1.2396694214876034	6	0	NA	NA	NA	1.7816354499771585	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015681	Chromosome_3A	967	3	29	50.361944157187175	0.4998752228163993	0.4319654427645788	23	0	0.5208333333333334	19	0	0	4	0	0.8662175168431184	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015682	Chromosome_3A	2676	2	81	36.09865470852018	0.9355472206276517	0.4675081813931744	81	0	0.6001500375093773	37	0	0.4074702886247878	44	0	42.568897637795274	54	0.35185185185185186	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015683	Chromosome_3A	4482	6	124	38.62115127175368	0.7420787412508979	0.6937033084311632	123	0	0.631911532385466	52	0	0.7252215954875101	71	0	0.6406685236768802	60	0	unmethylated (<10%)	Q9TTF0	Photoreceptor-specific nuclear receptor (Nuclear receptor subfamily 2 group E member 3) (Retina-specific nuclear receptor)	neuron differentiation [GO:0030182]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN016256	Chromosome_3A	15570	11	318	35.703275529865124	0.6414534668149796	86.28508771929825	317	0.9779179810725552	93.99908382959231	52	1	85.46830285686569	265	0.9735849056603774	37.249666221628836	23	0.34782608695652173	methylated (>=50%)	Q0IHW3	Protein Smaug homolog 1 (Smaug 1) (Sterile alpha motif domain-containing protein 4A)	regulation of mRNA stability [GO:0043488]	hit with GO BP
GN016257	Chromosome_3A	13753	8	165	41.42368937686323	0.33625617909598493	68.12172611623846	146	0.8082191780821918	67.74461028192371	22	0.8181818181818182	68.18849089841456	124	0.8064516129032258	38.38664812239221	26	0.46153846153846156	methylated (>=50%)	Q9BQT8	Mitochondrial 2-oxodicarboxylate carrier (ODC) (Mitochondrial 2-oxoadipate carrier) (Solute carrier family 25 member 21)	L-lysine catabolic process [GO:0019477]; mitochondrial alpha-ketoglutarate transmembrane transport [GO:1990550]	hit with GO BP
GN016258	Chromosome_3A	387	1	10	45.21963824289406	0.5197421434327155	90.01956947162427	10	0.9	90.01956947162427	10	0.9	NA	NA	NA	34.04433291509829	26	0.38461538461538464	methylated (>=50%)	Q29RU1	Small ribosomal subunit protein uS12m (28S ribosomal protein S12, mitochondrial) (MRP-S12) (S12mt)	mitochondrial translation [GO:0032543]; translation [GO:0006412]	hit with GO BP
GN016259	Chromosome_3A	1599	4	13	34.52157598499062	0.2778750651676982	82.54665203073546	13	0.8461538461538461	89.41176470588235	4	1	79.8780487804878	9	0.7777777777777778	88.33652007648183	10	0.9	methylated (>=50%)	B2RY56	RNA-binding protein 25 (RNA-binding motif protein 25)	regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of apoptotic process [GO:0042981]	hit with GO BP
GN016260	Chromosome_3A	432	1	18	46.2962962962963	0.7854545454545454	NA	0	NA	NA	NA	NA	NA	NA	NA	92.66844761056693	46	1	NA	NA	NA	NA	no Swiss-Prot hit
GN016261	Chromosome_3A	195	1	1	42.05128205128205	0.1368421052631579	NA	0	NA	NA	NA	NA	NA	NA	NA	94.67669172932331	52	1	NA	NA	NA	NA	no Swiss-Prot hit
GN016262	Chromosome_3A	11962	11	184	36.88346430362816	0.46263612088274264	90.67806534723036	184	0.9891304347826086	92.89597680318955	51	0.9803921568627451	89.61937716262976	133	0.9924812030075187	93.64345564865646	53	1	methylated (>=50%)	P49756	RNA-binding protein 25 (Arg/Glu/Asp-rich protein of 120 kDa) (RED120) (Protein S164) (RNA-binding motif protein 25) (RNA-binding region-containing protein 7)	regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of apoptotic process [GO:0042981]	hit with GO BP
GN016263	Chromosome_3A	3033	6	46	38.6086383119024	0.4075326860387676	81.20145002589332	46	0.9347826086956522	73.62459546925567	16	1	84.76770753998477	30	0.9	12.56971256971257	53	0.16981132075471697	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016264	Chromosome_3A	2296	3	60	45.60104529616725	0.5034498889018828	0.13333333333333333	39	0	0	32	0	0.5555555555555556	7	0	0.3601108033240997	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016265	Chromosome_3A	4688	6	139	40.6783276450512	0.7168621549252701	0.6736842105263158	139	0	0.701344243132671	58	0	0.6581112207963146	81	0	0.6119610570236439	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016266	Chromosome_3A	3143	2	91	40.34362074451161	0.7146894490644491	0.45327754532775455	91	0	0.4149377593360996	88	0	0.9216589861751152	3	0	0.8363201911589009	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016267	Chromosome_3A	1037	2	31	43.97299903567985	0.6423233695652174	0.7228915662650602	31	0	0.6622516556291391	26	0	0.8849557522123894	5	0	0.8348240906380441	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016268	Chromosome_3A	1500	3	56	39.53333333333333	0.9558271318358709	0.5133470225872689	56	0	0.6578947368421053	18	0	0.4691689008042895	38	0	0.5555555555555556	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016269	Chromosome_3A	324	1	14	51.23456790123457	0.6608391608391608	1.2820512820512822	14	0	1.2820512820512822	14	0	NA	NA	NA	0.5055147058823529	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016270	Chromosome_3A	846	1	23	44.326241134751776	0.571722395251807	0.1949317738791423	22	0	0.1949317738791423	22	0	NA	NA	NA	0.5249343832020997	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016271	Chromosome_3A	2191	2	80	45.413053400273846	0.7272244488146506	0.8722421754746024	74	0	0.5198180636777128	68	0	2.1951219512195124	6	0	0.5729166666666666	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016272	Chromosome_3A	690	1	21	41.44927536231884	0.708904109589041	0.3541912632821724	21	0	0.3541912632821724	21	0	NA	NA	NA	0.39434768320736113	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016273	Chromosome_3A	660	1	29	42.121212121212125	0.9906319548677605	0.6870705808869456	29	0	0.6870705808869456	29	0	NA	NA	NA	0.3274784161952962	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016274	Chromosome_3A	1773	1	83	44.500846023688666	0.9472251187579654	0.5653079440642665	83	0	0.5653079440642665	83	0	NA	NA	NA	0.5997001499250375	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016275	Chromosome_3A	866	2	32	41.454965357967666	0.9038486627527723	1.0781671159029649	32	0	1.0338345864661653	31	0	2.0408163265306123	1	0	0.24902170046246888	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016276	Chromosome_3A	678	1	23	41.88790560471976	0.7737037955842223	0.6451612903225806	23	0	0.6451612903225806	23	0	NA	NA	NA	0.5938914027149321	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016277	Chromosome_3A	201	1	7	59.701492537313435	0.39126807563959953	61.19402985074627	7	0.7142857142857143	61.19402985074627	7	0.7142857142857143	NA	NA	NA	6.204379562043796	53	0.03773584905660377	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015701	Chromosome_3A	999	1	27	41.34134134134134	0.6356759049773756	0.4821600771456123	27	0	0.4821600771456123	27	0	NA	NA	NA	0.5586592178770949	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016279	Chromosome_3A	1389	1	20	37.293016558675305	0.4242452008979704	0.22321428571428573	20	0	0.22321428571428573	20	0	NA	NA	NA	0.4846938775510204	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015703	Chromosome_3A	1110	1	41	40.810810810810814	0.888069312726847	0.4357298474945534	41	0	0.4357298474945534	41	0	NA	NA	NA	0.43807248108323377	54	0	unmethylated (<10%)	P48039	Melatonin receptor type 1A (Mel-1A-R) (Mel1a receptor)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; circadian rhythm [GO:0007623]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; mating behavior [GO:0007617]	hit with GO BP
GN016287	Chromosome_3A	4122	3	95	35.46821931101407	0.7329563640243252	0.8327994875080077	95	0	0.6187529747739172	49	0	1.0069713400464757	46	0	0.7285397529299968	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015705	Chromosome_3A	273	1	8	39.56043956043956	0.7878787878787878	0.3875968992248062	8	0	0.3875968992248062	8	0	NA	NA	NA	0.6814310051107325	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016286	Chromosome_3A	30474	22	584	34.09791953796679	0.6619856650742691	86.79753279812023	582	0.9879725085910653	89.92388546574846	57	0.9824561403508771	86.57112108564979	525	0.9885714285714285	69.12669126691267	14	0.7857142857142857	methylated (>=50%)	Q2NL67	Protein mono-ADP-ribosyltransferase PARP6 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 17) (ARTD17) (Poly [ADP-ribose] polymerase 6) (PARP-6)	endoplasmic reticulum unfolded protein response [GO:0030968]; positive regulation of dendrite morphogenesis [GO:0050775]; protein auto-ADP-ribosylation [GO:0070213]	hit with GO BP
GN016285	Chromosome_3A	11538	5	339	37.03414803258797	0.8571122411548125	3.269276393831554	339	0	1.518784972022382	27	0	3.379741727199354	312	0	0.6060606060606061	69	0	unmethylated (<10%)	Q3T0Y3	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN016284	Chromosome_3A	345	1	12	44.34782608695652	0.708904109589041	0.20242914979757085	12	0	0.20242914979757085	12	0	NA	NA	NA	1.4174541411895498	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016283	Chromosome_3A	309	1	14	51.77993527508091	0.6759375	0.8639308855291576	14	0	0.8639308855291576	14	0	NA	NA	NA	1.0624169986719787	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016282	Chromosome_3A	201	1	13	53.233830845771145	0.9365591397849462	0.7920792079207921	13	0	0.7920792079207921	13	0	NA	NA	NA	1.3651877133105803	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015708	Chromosome_3A	15201	9	255	33.99776330504572	0.5805391110248447	90.93713342312203	255	0.9411764705882353	82.67148014440433	18	0.8888888888888888	91.24673217344271	237	0.9451476793248945	2.144012944983819	50	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015709	Chromosome_3A	819	2	10	42.002442002442	0.27797576621525305	9.5	10	0	9.5	10	0	NA	NA	NA	1.949634443541836	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015710	Chromosome_3A	762	1	5	36.876640419947506	0.19808672143079964	0.3225806451612903	3	0	0.3225806451612903	3	0	NA	NA	NA	0.8043665613329503	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016280	Chromosome_3A	5517	4	155	35.97969911183614	0.8690979273000018	0.5608926546930008	145	0	0.5356708059410762	42	0	0.5690799873537781	103	0	0.4537953795379538	75	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN015711	Chromosome_3A	701	2	36	49.35805991440799	0.8460223272654128	0.5543237250554324	36	0	0.5841121495327103	35	0	0	1	0	0.37862852334875896	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016306	Chromosome_3A	786	1	39	56.23409669211196	0.6278341013824885	0.7915567282321899	39	0	0.7915567282321899	39	0	NA	NA	NA	0.4591368227731864	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015712	Chromosome_3A	153	1	14	60.78431372549019	0.9935064935064936	0.6944444444444444	14	0	0.6944444444444444	14	0	NA	NA	NA	0.6180469715698393	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016305	Chromosome_3A	735	1	33	53.06122448979592	0.6378698224852071	0.7021063189568706	33	0	0.7021063189568706	33	0	NA	NA	NA	0.6067961165048543	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015585	Chromosome_3A	727	1	35	53.645116918844565	0.6691826215022091	0.5228758169934641	35	0	0.5228758169934641	35	0	NA	NA	NA	0.3659061558329746	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016308	Chromosome_3A	711	1	34	52.60196905766526	0.6913177762525737	0.9285714285714286	34	0	0.9285714285714286	34	0	NA	NA	NA	2.7563395810363835	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016303	Chromosome_3A	908	2	40	51.43171806167401	0.666397563392169	0.46104195481788846	39	0	0.495785820525533	38	0	0	1	0	0.5372217958557176	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015713	Chromosome_3A	1222	2	17	41.1620294599018	0.32890028814793704	0.36231884057971014	17	0	0.3780718336483932	16	0	0	1	0	2.3622047244094486	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015714	Chromosome_3A	1126	2	16	40.852575488454704	0.34243789321624757	89.21001926782273	16	1	89.51612903225806	15	1	82.6086956521739	1	1	85.76071501117205	48	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015715	Chromosome_3A	13722	11	326	37.78603702084244	0.6680413664364383	85.52740129640542	316	0.9272151898734177	87.31082654249127	68	0.9411764705882353	85.07462686567165	248	0.9233870967741935	55.08695652173913	39	0.5897435897435898	methylated (>=50%)	Q810V0	U3 small nucleolar ribonucleoprotein protein MPP10 (M phase phosphoprotein 10)	ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]	hit with GO BP
GN015716	Chromosome_3A	7882	9	142	37.794975894443034	0.509683236488825	85.19332729859046	142	0.9154929577464789	94.77944152165115	51	1	80.69175218548081	91	0.8681318681318682	59.05292479108635	51	0.6274509803921569	methylated (>=50%)	Q60803	TNF receptor-associated factor 3 (EC 2.3.2.27) (CD40 receptor-associated factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (RING-type E3 ubiquitin transferase TRAF3)	antiviral innate immune response [GO:0140374]; cell surface receptor signaling pathway [GO:0007166]; mRNA transcription [GO:0009299]; positive regulation of type I interferon production [GO:0032481]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of cytokine production [GO:0001817]; regulation of defense response to virus [GO:0050688]; regulation of interferon-beta production [GO:0032648]; regulation of proteolysis [GO:0030162]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor signaling pathway [GO:0002224]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN015717	Chromosome_3A	870	1	35	47.01149425287356	0.7415254237288136	11.89913317572892	35	0.14285714285714285	11.89913317572892	35	0.14285714285714285	NA	NA	NA	0.4387445156935538	64	0	sparse (10-50%)	Q0IH86	Structure-specific endonuclease subunit slx1 (EC 3.1.-.-) (GIY-YIG domain-containing protein 1)	double-strand break repair via homologous recombination [GO:0000724]; regulation of telomere maintenance [GO:0032204]; t-circle formation [GO:0090656]	hit with GO BP
GN015718	Chromosome_3A	11133	9	211	37.55501661726399	0.5376495662527173	89.14481549374352	204	0.9362745098039216	76.52050919377652	36	0.75	90.74822599479026	168	0.9761904761904762	6.963042313872522	46	0	methylated (>=50%)	Q96B67	Arrestin domain-containing protein 3 (TBP-2-like inducible membrane protein) (TLIMP)	negative regulation of cold-induced thermogenesis [GO:0120163]; positive regulation of hippo signaling [GO:0035332]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]	hit with GO BP
GN015719	Chromosome_3A	595	3	5	32.773109243697476	0.3246398952422523	5	5	0	4.597701149425287	4	0	6.0606060606060606	1	0	21.52451309603761	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003448	Chromosome_3A	314	1	9	46.17834394904459	0.5470383275261324	0.36900369003690037	9	0	0.36900369003690037	9	0	NA	NA	NA	0.7796471070988921	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001298	Chromosome_3A	589	1	10	43.463497453310694	0.37149164301482185	0	10	0	0	10	0	NA	NA	NA	0.7084661707403471	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016297	Chromosome_3A	375	1	10	43.46666666666667	0.5656108597285068	0.7407407407407407	10	0	0.7407407407407407	10	0	NA	NA	NA	8.509513742071881	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016296	Chromosome_3A	1119	1	32	48.257372654155496	0.49615496529076775	1.1312217194570136	23	0	1.1312217194570136	23	0	NA	NA	NA	0.847457627118644	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015722	Chromosome_3A	24434	34	323	35.209134812147006	0.42709566170214586	79.05884438142503	323	0.9380804953560371	85.75437438098382	118	0.940677966101695	76.60205935796488	205	0.9365853658536586	1.0873146622734762	67	0	methylated (>=50%)	Q92797	Symplekin	mRNA 3'-end processing [GO:0031124]; negative regulation of protein binding [GO:0032091]; nuclear histone mRNA catabolic process [GO:0071045]	hit with GO BP
GN016295	Chromosome_3A	3136	5	50	37.56377551020408	0.4525513738166705	36.194723151244894	50	0.46	42.932396839332746	20	0.45	31.25	30	0.4666666666666667	5.380952380952381	46	0	sparse (10-50%)	Q6NXP6	NADP-dependent oxidoreductase domain-containing protein 1 (EC 1.-.-.-) (Pyrroline-5-carboxylate reductase-like protein C14orf148)	L-proline biosynthetic process [GO:0055129]	hit with GO BP
GN015723	Chromosome_3A	801	3	9	30.087390761548065	0.49792789059262327	79.72972972972973	9	0.8888888888888888	91.47286821705427	4	1	72.30392156862744	5	0.8	42.61918437679495	26	0.34615384615384615	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016294	Chromosome_3A	3259	5	39	31.0524700828475	0.4973586589030804	80.97463284379172	39	0.8974358974358975	86.43617021276596	15	0.9333333333333333	77.67665952890792	24	0.875	52.28448275862069	32	0.59375	methylated (>=50%)	Q8RB67	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN015724	Chromosome_3A	5108	4	53	35.512920908379016	0.329795281921341	88.10861423220973	53	0.9811320754716981	88.34745762711864	10	1	88.06734992679355	43	0.9767441860465116	90.69103369503141	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015725	Chromosome_3A	5753	5	78	33.93012341387102	0.4735803954471339	80.3122289679098	77	0.935064935064935	92.99655568312285	38	1	69.79695431472081	39	0.8717948717948718	84.90272373540856	18	1	methylated (>=50%)	Q9VAY7	Protein FAM50 homolog	chromatin organization [GO:0006325]	hit with GO BP
GN016292	Chromosome_3A	4137	3	95	39.207154943195555	0.5975551349009054	54.12577244638313	77	0.5714285714285714	48.33501513622603	27	0.7037037037037037	57.38636363636363	50	0.5	71.29221732745962	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016291	Chromosome_3A	2142	1	61	37.62838468720822	0.8057945273907976	0.6114961271911945	61	0	0.6114961271911945	61	0	NA	NA	NA	0.6508298080052066	64	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN016290	Chromosome_3A	2142	1	59	38.04855275443511	0.7633826638477801	0.6195786864931846	59	0	0.6195786864931846	59	0	NA	NA	NA	0.6933501418216199	54	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015728	Chromosome_3A	399	1	15	46.8671679197995	0.6890398342159797	80.5111821086262	15	1	80.5111821086262	15	1	NA	NA	NA	38.56749311294766	13	0.23076923076923078	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015729	Chromosome_3A	657	1	8	40.94368340943684	0.2906436629064366	74.50980392156863	8	1	74.50980392156863	8	1	NA	NA	NA	79.66631908237747	16	0.9375	methylated (>=50%)	Q96MP8	BTB/POZ domain-containing protein KCTD7	intracellular glutamate homeostasis [GO:0090461]; intracellular potassium ion homeostasis [GO:0030007]; membrane hyperpolarization [GO:0060081]; protein homooligomerization [GO:0051260]	hit with GO BP
GN015730	Chromosome_3A	228	1	14	55.70175438596491	0.7920595533498759	0.3663003663003663	14	0	0.3663003663003663	14	0	NA	NA	NA	0.68359375	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015731	Chromosome_3A	547	3	20	37.6599634369287	1.0312971342383108	0.8092485549132948	20	0	0.8941877794336811	16	0	0.5154639175257731	4	0	0.6410256410256411	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015732	Chromosome_3A	192	1	0	55.208333333333336	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7660878447395302	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015733	Chromosome_3A	237	1	0	52.742616033755276	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7310704960835509	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015734	Chromosome_3A	222	1	1	54.5045045045045	0.38275862068965516	0	1	0	0	1	0	NA	NA	NA	0.3418803418803419	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015735	Chromosome_3A	7573	12	211	35.58695365112901	0.8800217430334726	0.7086399563913873	211	0	0.6219960418433701	82	0	0.749665327978581	129	0	0.3076923076923077	33	0	unmethylated (<10%)	P22589	Polyubiquitin [Cleaved into: Ubiquitin]	NA	hit, no GO BP
GN015736	Chromosome_3A	654	1	14	43.883792048929664	0.462891809908999	58.68625756266206	14	0.6428571428571429	58.68625756266206	14	0.6428571428571429	NA	NA	NA	58.1926061159288	29	0.4827586206896552	methylated (>=50%)	A5D7J3	Lysine-rich nucleolar protein 1 (Testis-specific gene 118 protein)	NA	hit, no GO BP
GN015737	Chromosome_3A	2584	4	69	37.345201238390096	0.766218585622443	0.5964214711729622	69	0	0.4618937644341801	21	0	0.64030131826742	48	0	0.7539041464728056	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015738	Chromosome_3A	804	2	20	38.308457711442784	0.6828895400687985	60.99476439790576	20	0.65	64.70588235294117	17	0.6470588235294118	50.33783783783784	3	0.6666666666666666	3.5145075602778912	68	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015739	Chromosome_3A	930	3	34	42.365591397849464	0.8147804576376005	9.789343246592317	30	0	7.142857142857143	27	0	20.245398773006134	3	0	1.1455946677775464	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015740	Chromosome_3A	261	1	9	44.827586206896555	0.6949704142011834	1.3966480446927374	9	0	1.3966480446927374	9	0	NA	NA	NA	0.5275056518462697	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016328	Chromosome_3A	10439	9	288	37.71434045406648	0.7811783340686683	0.7399577167019028	277	0	0.889967637540453	65	0	0.7022186037044575	212	0	2.3368251410153102	60	0	unmethylated (<10%)	Q60803	TNF receptor-associated factor 3 (EC 2.3.2.27) (CD40 receptor-associated factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (RING-type E3 ubiquitin transferase TRAF3)	antiviral innate immune response [GO:0140374]; cell surface receptor signaling pathway [GO:0007166]; mRNA transcription [GO:0009299]; positive regulation of type I interferon production [GO:0032481]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of cytokine production [GO:0001817]; regulation of defense response to virus [GO:0050688]; regulation of interferon-beta production [GO:0032648]; regulation of proteolysis [GO:0030162]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor signaling pathway [GO:0002224]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN016327	Chromosome_3A	468	1	14	41.23931623931624	0.7657784011220197	0.8021390374331551	14	0	0.8021390374331551	14	0	NA	NA	NA	0.5357142857142857	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016326	Chromosome_3A	8497	6	214	35.34188537130752	0.8065710623084328	0.9476309226932669	212	0	0.8130081300813008	56	0	0.9844395046046364	156	0	0.5689277899343544	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016325	Chromosome_3A	2072	3	32	36.87258687258687	0.45738567772466077	80.34140969162996	31	1	81.08108108108108	15	1	79.63362068965517	16	1	93.07855626326963	40	1	methylated (>=50%)	P82915	Small ribosomal subunit protein bS16m (28S ribosomal protein S16, mitochondrial) (MRP-S16) (S16mt)	mitochondrial translation [GO:0032543]	hit with GO BP
GN015744	Chromosome_3A	918	3	40	41.830065359477125	0.9974195300828467	0.44692737430167595	40	0	0.5333333333333333	35	0	0	5	0	2.331002331002331	64	0	unmethylated (<10%)	A2YH60	Cyclin-B2-2 (CycOs2) (G2/mitotic-specific cyclin-B2-2) (CycB2;2)	mitotic cell cycle phase transition [GO:0044772]; response to gamma radiation [GO:0010332]	hit with GO BP
GN015745	Chromosome_3A	624	2	16	46.31410256410256	0.4786193672099712	0.29069767441860467	16	0	0.3257328990228013	14	0	0	2	0	0.6577455205261964	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015746	Chromosome_3A	477	1	8	42.34800838574424	0.38371040723981903	0.7662835249042146	8	0	0.7662835249042146	8	0	NA	NA	NA	0.6505026611472502	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015747	Chromosome_3A	917	3	41	42.529989094874594	0.9908549441281889	0.5741626794258373	41	0	0.5580357142857143	36	0	0.6711409395973155	5	0	0.8871989860583016	69	0	unmethylated (<10%)	A2YH60	Cyclin-B2-2 (CycOs2) (G2/mitotic-specific cyclin-B2-2) (CycB2;2)	mitotic cell cycle phase transition [GO:0044772]; response to gamma radiation [GO:0010332]	hit with GO BP
GN015748	Chromosome_3A	969	3	25	42.208462332301345	0.5802673181948836	9.074243813015583	25	0	8.645533141210375	23	0	18	2	0	2.132867132867133	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015749	Chromosome_3A	891	2	30	40.29180695847362	0.8358348968105066	0.3451251078515962	30	0	0.46801872074882994	18	0	0.19305019305019305	12	0	1.949490474080638	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015750	Chromosome_3A	20803	12	357	35.321828582415996	0.5540120807883419	90.93225912528773	353	0.9858356940509915	96.53899400092294	42	1	90.38400794187987	311	0.9839228295819936	65.2014652014652	11	0.8181818181818182	methylated (>=50%)	Q62763	Casein kinase I isoform gamma-3 (CKI-gamma 3) (EC 2.7.11.1)	endocytosis [GO:0006897]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]	hit with GO BP
GN016337	Chromosome_3A	20042	21	239	34.98652829058976	0.38987927024295715	84.25698253577958	239	0.9414225941422594	86.66309587573647	71	0.971830985915493	83.51612105219758	168	0.9285714285714286	1.0405827263267429	64	0	methylated (>=50%)	A0JN62	Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)	centrosome cycle [GO:0007098]; interkinetic nuclear migration [GO:0022027]; positive regulation of centriole elongation [GO:1903724]; positive regulation of centrosome duplication [GO:0010825]; positive regulation of cilium assembly [GO:0045724]; positive regulation of establishment of protein localization [GO:1904951]	hit with GO BP
GN016336	Chromosome_3A	495	1	11	59.5959595959596	0.2515476300471219	80.85106382978724	3	1	80.85106382978724	3	1	NA	NA	NA	76.9690927218345	17	0.8235294117647058	NA	NA	NA	NA	no Swiss-Prot hit
GN015752	Chromosome_3A	3352	3	67	35.023866348448685	0.6521533337398693	73.48797250859107	66	0.9545454545454546	82.02247191011236	7	1	72.78139534883721	59	0.9491525423728814	77.69718948322756	16	1	methylated (>=50%)	Q75AC3	Cytosolic Fe-S cluster assembly factor CFD1 (Cytosolic Fe-S cluster-deficient protein 1)	iron-sulfur cluster assembly [GO:0016226]	hit with GO BP
GN016335	Chromosome_3A	34835	22	494	36.25663843835223	0.4347293487713435	89.24556852572417	472	0.9851694915254238	94.61725723559643	84	1	88.42013383764912	388	0.9819587628865979	93.49514563106796	15	1	methylated (>=50%)	Q5M7P5	Nucleolar protein 6	ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]; tRNA export from nucleus [GO:0006409]	hit with GO BP
GN016334	Chromosome_3A	3982	6	57	35.73581115017579	0.4491315136476427	89.80234889716414	57	0.9824561403508771	90.45915324985093	35	0.9714285714285714	89.19514884233737	22	1	14.51169188445667	34	0.058823529411764705	methylated (>=50%)	Q91XE9	Cyclic AMP-responsive element-binding protein 3-like protein 3 (cAMP-responsive element-binding protein 3-like protein 3) (Transcription factor CREB-H) [Cleaved into: Processed cyclic AMP-responsive element-binding protein 3-like protein 3]	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN016333	Chromosome_3A	2179	2	36	37.7696190913263	0.4633377042208598	62.943834732085215	36	0.5277777777777778	45.15765765765766	26	0.4230769230769231	86.83812405446294	10	0.8	63.678451178451176	47	0.6382978723404256	methylated (>=50%)	Q8IWL3	Iron-sulfur cluster co-chaperone protein HscB (DnaJ homolog subfamily C member 20) [Cleaved into: Iron-sulfur cluster co-chaperone protein HscB, cytoplasmic (C-HSC20); Iron-sulfur cluster co-chaperone protein HscB, mitochondrial]	[2Fe-2S] cluster assembly [GO:0044571]; iron-sulfur cluster assembly [GO:0016226]; primitive erythrocyte differentiation [GO:0060319]; primitive hemopoiesis [GO:0060215]; protein complex oligomerization [GO:0051259]	hit with GO BP
GN016332	Chromosome_3A	1068	1	43	41.01123595505618	0.9588074409670752	13.298627543776622	43	0	13.298627543776622	43	0	NA	NA	NA	10.376569037656903	45	0	sparse (10-50%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN015756	Chromosome_3A	189	1	13	54.4973544973545	1.0061425061425062	0.5747126436781609	13	0	0.5747126436781609	13	0	NA	NA	NA	12.934362934362934	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016367	Chromosome_3A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016366	Chromosome_3A	15600	3	374	37.69871794871795	0.6765867852664947	85.69647865378623	373	0.9946380697050938	87.06304152972811	309	0.9967637540453075	80.7871198568873	64	0.984375	90.61819764910753	55	1	methylated (>=50%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN015758	Chromosome_3A	10363	13	185	34.53633117823024	0.5992143019670894	84.5448269060065	180	0.9333333333333333	87.32673267326733	70	0.9285714285714286	83.35912223941483	110	0.9363636363636364	0.6484149855907781	33	0	methylated (>=50%)	Q9D6R2	Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.41) (Isocitric dehydrogenase subunit alpha) (NAD(+)-specific ICDH subunit alpha)	tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN015759	Chromosome_3A	7114	4	116	36.308687095867306	0.49476827147910546	93.95348837209302	116	1	95.11834319526628	74	1	92.28045325779037	42	1	87.81275221953189	21	0.9523809523809523	methylated (>=50%)	Q61532	Mitogen-activated protein kinase 6 (MAP kinase 6) (MAPK 6) (EC 2.7.11.24) (Extracellular signal-regulated kinase 3) (ERK-3)	intracellular signal transduction [GO:0035556]; positive regulation of dendritic spine development [GO:0060999]; protein phosphorylation [GO:0006468]	hit with GO BP
GN016364	Chromosome_3A	7088	6	87	33.831828442437924	0.42966555183946487	80.82240340304857	87	0.8505747126436781	75.93423019431988	22	0.7727272727272727	82.34200743494424	65	0.8769230769230769	52.74170274170274	48	0.6458333333333334	methylated (>=50%)	Q6PBX9	Receptor expression-enhancing protein 5	endoplasmic reticulum membrane organization [GO:0090158]	hit with GO BP
GN015761	Chromosome_3A	65944	21	834	35.06308382870314	0.41389068264969314	78.52399697801106	821	0.9098660170523751	85.24255319148936	110	0.9727272727272728	77.6354591090201	711	0.90014064697609	17.86896095301125	29	0.1724137931034483	methylated (>=50%)	Q8IUZ0	Leucine-rich repeat-containing protein 49 (Centriolar satellite-associated tubulin polyglutamylase complex regulator 2) (Tubulin polyglutamylase complex subunit 4) (PGs4)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN016363	Chromosome_3A	13599	10	213	34.612839179351425	0.5233049331729049	83.62850605880857	184	0.9456521739130435	87.59464181712289	31	0.9354838709677419	82.9531931773106	153	0.9477124183006536	33.121827411167516	27	0.3333333333333333	methylated (>=50%)	Q03249	Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase)	galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; galactose metabolic process [GO:0006012]; glycolytic process from galactose [GO:0061623]; UDP-alpha-D-glucose metabolic process [GO:0006011]	hit with GO BP
GN015762	Chromosome_3A	5883	5	95	35.305116437191906	0.5202840832923723	92.63420724094881	94	1	94.55481972038264	24	1	92.1880341880342	70	1	92.53019707565161	47	1	methylated (>=50%)	P42574	Caspase-3 (CASP-3) (EC 3.4.22.56) (Apopain) (Cysteine protease CPP32) (CPP-32) (Protein Yama) (SREBP cleavage activity 1) (SCA-1) [Cleaved into: Caspase-3 subunit p17; Caspase-3 subunit p12]	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; axonal fasciculation [GO:0007413]; cellular response to staurosporine [GO:0072734]; erythrocyte differentiation [GO:0030218]; execution phase of apoptosis [GO:0097194]; glial cell apoptotic process [GO:0034349]; hippocampus development [GO:0021766]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to osmotic stress [GO:0008627]; keratinocyte differentiation [GO:0030216]; learning or memory [GO:0007611]; leukocyte apoptotic process [GO:0071887]; luteolysis [GO:0001554]; negative regulation of cytokine production [GO:0001818]; neuron differentiation [GO:0030182]; neurotrophin TRK receptor signaling pathway [GO:0048011]; platelet formation [GO:0030220]; positive regulation of amyloid-beta formation [GO:1902004]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of pyroptotic inflammatory response [GO:0140639]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of macroautophagy [GO:0016241]; regulation of protein localization [GO:0032880]; regulation of protein stability [GO:0031647]; regulation of synaptic vesicle cycle [GO:0098693]; response to amino acid [GO:0043200]; response to anesthetic [GO:0072347]; response to cobalt ion [GO:0032025]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to glucocorticoid [GO:0051384]; response to glucose [GO:0009749]; response to hydrogen peroxide [GO:0042542]; response to hypoxia [GO:0001666]; response to insulin-like growth factor stimulus [GO:1990418]; response to lipopolysaccharide [GO:0032496]; response to nicotine [GO:0035094]; response to tumor necrosis factor [GO:0034612]; response to X-ray [GO:0010165]; response to xenobiotic stimulus [GO:0009410]; striated muscle cell differentiation [GO:0051146]; swimming behavior [GO:0036269]; synapse pruning [GO:0098883]	hit with GO BP
GN015763	Chromosome_3A	378	1	5	46.03174603174603	0.2498347653668209	65.4320987654321	5	1	65.4320987654321	5	1	NA	NA	NA	68.76283367556468	42	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015764	Chromosome_3A	12495	8	310	36.41456582633053	0.7489586275985004	14.507391424111653	246	0.1016260162601626	0.6766553890768487	58	0	17.75107685332124	188	0.13297872340425532	2.1881838074398248	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015765	Chromosome_3A	13455	3	309	37.770345596432556	0.645384847036032	0.4855154555753358	309	0	0.4691980189416978	295	0	0.7067137809187279	14	0	1.2345679012345678	62	0	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN015766	Chromosome_3A	168	1	8	45.833333333333336	0.9424964936886395	0	8	0	0	8	0	NA	NA	NA	0.4824561403508772	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015767	Chromosome_3A	8335	14	261	36.56868626274745	0.9368253783694747	0.8794660384766392	219	0	0.5102040816326531	65	0	1.0436755530346	154	0	0.8547008547008547	46	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN015884	Chromosome_3A	183	1	10	44.26229508196721	1.337719298245614	1.0457516339869282	10	0	1.0457516339869282	10	0	NA	NA	NA	0.8149405772495756	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001021	Chromosome_3A	2843	8	30	34.435455504748504	0.35891932836763035	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015768	Chromosome_3A	2882	6	74	36.74531575294934	0.7647084134132699	0.72783987522745	74	0	0.7698229407236336	27	0	0.706436420722135	47	0	0.6508298080052066	73	0	unmethylated (<10%)	Q6GNY1	E3 ubiquitin-protein ligase mib1 (EC 2.3.2.27) (Mind bomb homolog 1) (RING-type E3 ubiquitin transferase mib1)	endocytosis [GO:0006897]; Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]	hit with GO BP
GN015769	Chromosome_3A	783	2	14	43.29501915708812	0.3821109871723369	0.44150110375275936	14	0	0.2976190476190476	10	0	0.8547008547008547	4	0	0.5595970900951315	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015770	Chromosome_3A	417	1	15	42.92565947242206	0.7863967814935882	0.2777777777777778	15	0	0.2777777777777778	15	0	NA	NA	NA	2.2838002436053593	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016360	Chromosome_3A	741	1	7	39.94601889338731	0.23960643015521063	1.4164305949008498	7	0	1.4164305949008498	7	0	NA	NA	NA	1.7534246575342465	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016359	Chromosome_3A	2007	1	65	39.26258096661684	0.8406309806878154	0.19249278152069296	65	0	0.19249278152069296	65	0	NA	NA	NA	1.3687600644122384	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016358	Chromosome_3A	578	3	21	38.4083044982699	1.0471014492753623	0.5887300252312868	21	0	0.7246376811594203	15	0	0.2770083102493075	6	0	0.47980807676929227	50	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN016357	Chromosome_3A	2051	4	54	35.34861043393467	0.8428382265649971	0.4434589800443459	54	0	0.5272407732864675	20	0	0.396235760277365	34	0	0.3927729772191673	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016356	Chromosome_3A	426	1	10	47.88732394366197	0.41731974921630094	83.86167146974063	10	1	83.86167146974063	10	1	NA	NA	NA	65.304755525787	20	0.7	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016355	Chromosome_3A	579	1	15	38.6873920552677	0.7201492537313433	0.4580152671755725	15	0	0.4580152671755725	15	0	NA	NA	NA	30.328358208955223	35	0.22857142857142856	unmethylated (<10%)	Q16611	Bcl-2 homologous antagonist/killer (Apoptosis regulator BAK) (Bcl-2-like protein 7) (Bcl2-L-7)	animal organ regeneration [GO:0031100]; apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cellular response to mechanical stimulus [GO:0071260]; cellular response to unfolded protein [GO:0034620]; cellular response to UV [GO:0034644]; endocrine pancreas development [GO:0031018]; endoplasmic reticulum calcium ion homeostasis [GO:0032469]; establishment or maintenance of transmembrane electrochemical gradient [GO:0010248]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; positive regulation of apoptotic process [GO:0043065]; positive regulation of IRE1-mediated unfolded protein response [GO:1903896]; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901030]; positive regulation of protein-containing complex assembly [GO:0031334]; positive regulation of proteolysis [GO:0045862]; positive regulation of release of cytochrome c from mitochondria [GO:0090200]; regulation of mitochondrial membrane permeability [GO:0046902]; regulation of mitochondrial membrane potential [GO:0051881]; release of cytochrome c from mitochondria [GO:0001836]; response to ethanol [GO:0045471]; response to hydrogen peroxide [GO:0042542]; response to UV-C [GO:0010225]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN016354	Chromosome_3A	8882	7	322	36.376942130150866	1.1529484802064016	0.5367583628869932	308	0	0.3304692663582287	35	0	0.5717488789237668	273	0	0.495458298926507	56	0	unmethylated (<10%)	Q1HRV8	Very long chain fatty acid elongase AAEL008004 (EC 2.3.1.199) (3-keto acyl-CoA synthase AAEL008004) (Elongation of very long chain fatty acids protein AAEL008004) (Very-long-chain 3-oxoacyl-CoA synthase AAEL008004)	fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; sphingolipid biosynthetic process [GO:0030148]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN016353	Chromosome_3A	7197	3	211	34.59774906210921	0.9849670243568323	0.43523938165991294	209	0	0.37614185921547555	59	0	0.45814244064972925	150	0	0.5437146585471945	61	0	unmethylated (<10%)	P16537	Protein SPEC3	NA	hit, no GO BP
GN016352	Chromosome_3A	944	2	29	38.45338983050848	0.8363680801661982	0.6619144602851323	29	0	0.6507592190889371	27	0	0.8333333333333334	2	0	0.5298013245033113	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016351	Chromosome_3A	1281	1	75	49.57064793130367	0.9625403250045084	0.3138485680659082	69	0	0.3138485680659082	69	0	NA	NA	NA	0.5716100349317244	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016350	Chromosome_3A	933	1	46	48.231511254019296	0.8485843087630497	0.30456852791878175	45	0	0.30456852791878175	45	0	NA	NA	NA	0.3853564547206166	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015779	Chromosome_3A	741	1	4	41.02564102564103	0.1284896826773019	62.916666666666664	4	1	62.916666666666664	4	1	NA	NA	NA	88.91352549889135	6	1	NA	NA	NA	NA	no Swiss-Prot hit
GN015780	Chromosome_3A	180	1	8	49.44444444444444	0.8135593220338984	95.90361445783132	8	1	95.90361445783132	8	1	NA	NA	NA	96.7654986522911	8	1	methylated (>=50%)	Q8IY18	Structural maintenance of chromosomes protein 5 (SMC protein 5) (SMC-5) (hSMC5)	cellular senescence [GO:0090398]; chromatin looping [GO:0140588]; DNA damage response [GO:0006974]; double-strand break repair via homologous recombination [GO:0000724]; host-mediated suppression of viral genome replication [GO:0044828]; positive regulation of chromosome segregation [GO:0051984]; positive regulation of maintenance of mitotic sister chromatid cohesion [GO:0034184]; protein sumoylation [GO:0016925]; regulation of telomere maintenance [GO:0032204]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN015781	Chromosome_3A	3337	3	72	32.99370692238538	0.8088498673597178	87.68748969836822	72	0.9583333333333334	84.02777777777777	3	1	87.86987368056758	69	0.9565217391304348	89.41736028537456	48	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015782	Chromosome_3A	640	2	29	45.46875	0.8843148465789975	0.19607843137254902	29	0	0.21141649048625794	28	0	0	1	0	0.5027932960893855	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015783	Chromosome_3A	1788	1	69	43.344519015659955	0.8241612890296204	0.37037037037037035	69	0	0.37037037037037035	69	0	NA	NA	NA	0.45610034207525657	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015784	Chromosome_3A	6347	5	194	37.34047581534583	0.8769721435612254	0.7354774370481176	194	0	0.5758157389635317	23	0	0.7593123209169055	171	0	0.5359877488514548	64	0	unmethylated (<10%)	Q5RJN4	Shiftless antiviral inhibitor of ribosomal frameshifting protein homolog (SHFL) (Repressor of yield of DENV protein homolog) (RyDEN)	defense response to virus [GO:0051607]; negative regulation of translational frameshifting [GO:2001125]; negative regulation of viral genome replication [GO:0045071]; regulation of translational termination [GO:0006449]; response to interferon-beta [GO:0035456]; response to type I interferon [GO:0034340]; response to type II interferon [GO:0034341]; response to type III interferon [GO:0034342]; viral translational frameshifting [GO:0075523]	hit with GO BP
GN015785	Chromosome_3A	438	1	18	48.401826484018265	0.7056928034371643	0.5383580080753702	18	0	0.5383580080753702	18	0	NA	NA	NA	0.6711409395973155	54	0	unmethylated (<10%)	Q7YTC2	Homeobox protein orthopedia	neuron differentiation [GO:0030182]	hit with GO BP
GN016345	Chromosome_3A	207	1	18	43.96135265700483	1.8017408123791103	0	18	0	0	18	0	NA	NA	NA	0.6658130601792573	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016344	Chromosome_3A	1203	3	43	36.82460515378221	1.0617610837438423	0.6314839873703203	43	0	0.8010680907877169	22	0	0.5449591280653951	21	0	0.6278777731268314	41	0	unmethylated (<10%)	Q6SZ65	Homeobox protein orthopedia	neuron differentiation [GO:0030182]	hit with GO BP
GN015787	Chromosome_3A	201	1	8	45.27363184079602	0.7790697674418605	0.8670520231213873	8	0	0.8670520231213873	8	0	NA	NA	NA	0.4004004004004004	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015788	Chromosome_3A	1296	1	42	45.370370370370374	0.63	0.4042037186742118	42	0	0.4042037186742118	42	0	NA	NA	NA	0.949667616334283	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015789	Chromosome_3A	9208	3	142	35.5994787141616	0.48676917761913696	85.29217926186291	142	0.9225352112676056	71.85877466251299	29	0.7241379310344828	86.8812185235229	113	0.9734513274336283	44.93639921722114	49	0.3469387755102041	methylated (>=50%)	Q5ZJ01	Alpha/beta hydrolase domain-containing protein 17B (Abhydrolase domain-containing protein 17B) (EC 3.1.2.22)	negative regulation of protein localization to microtubule [GO:1902817]; positive regulation of protein localization to endosome [GO:1905668]; regulation of dendritic spine maintenance [GO:1902950]; regulation of postsynapse organization [GO:0099175]; regulation of protein localization to synapse [GO:1902473]	hit with GO BP
GN015790	Chromosome_3A	8318	4	112	36.114450589083916	0.4331026839260112	82.07292370020257	110	0.8818181818181818	73.82937780628608	21	0.7619047619047619	83.8269414494336	89	0.9101123595505618	26.72322375397667	37	0.24324324324324326	methylated (>=50%)	Q9CQ90	Uncharacterized protein C9orf85 homolog	NA	hit, no GO BP
GN015791	Chromosome_3A	24358	15	352	33.73019131291567	0.508408349218841	79.02533276084156	347	0.9048991354466859	94.26652892561984	28	1	77.89097339689374	319	0.896551724137931	93.84153210664664	60	1	methylated (>=50%)	O35094	Mitochondrial import inner membrane translocase subunit TIM44	cardiac muscle cell differentiation [GO:0055007]; intracellular protein transport [GO:0006886]; protein import into mitochondrial matrix [GO:0030150]; response to 3,3',5-triiodo-L-thyronine [GO:1905242]	hit with GO BP
GN015792	Chromosome_3A	4229	6	27	35.58760936391582	0.20266988998817878	76.44927536231884	27	0.8888888888888888	68.75	7	0.8571428571428571	80.29891304347827	20	0.9	63.41376863023421	60	0.5833333333333334	methylated (>=50%)	Q9D1I5	Methylmalonyl-CoA epimerase, mitochondrial (EC 5.1.99.1) (DL-methylmalonyl-CoA racemase)	L-methylmalonyl-CoA metabolic process [GO:0046491]; succinyl-CoA biosynthetic process [GO:1901290]	hit with GO BP
GN016341	Chromosome_3A	29403	14	818	36.2820120395878	0.8460236597374179	11.605686913982877	792	0.025252525252525252	12.066115702479339	82	0.012195121951219513	11.55876242349374	710	0.02676056338028169	0.4515805318615153	42	0	sparse (10-50%)	Q29121	Polypeptide N-acetylgalactosaminyltransferase 1 (EC 2.4.1.41) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) [Cleaved into: Polypeptide N-acetylgalactosaminyltransferase 1 soluble form]	protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN015793	Chromosome_3A	789	3	30	38.78326996197718	1.0154875799047578	0.43832185347526614	30	0	0.5733005733005733	23	0	0	7	0	0.6749740394600208	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016340	Chromosome_3A	459	1	16	45.751633986928105	0.6690962099125365	0.4	16	0	0.4	16	0	NA	NA	NA	1.2826837691169215	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016339	Chromosome_3A	894	2	0	46.085011185682326	0	NA	0	NA	NA	NA	NA	NA	NA	NA	75.32154340836013	21	0.9047619047619048	NA	NA	NA	NA	no Swiss-Prot hit
GN016371	Chromosome_3A	468	1	37	68.58974358974359	0.6756672389573903	NA	0	NA	NA	NA	NA	NA	NA	NA	0	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016370	Chromosome_3A	342	1	27	64.91228070175438	0.7516483516483516	NA	0	NA	NA	NA	NA	NA	NA	NA	0	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015796	Chromosome_3A	222	1	3	48.1981981981982	0.23319327731092437	2.4096385542168677	3	0	2.4096385542168677	3	0	NA	NA	NA	1.4271653543307086	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015797	Chromosome_3A	597	1	12	46.733668341708544	0.3716153127917834	0.9049773755656109	12	0	0.9049773755656109	12	0	NA	NA	NA	0.6791171477079796	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016375	Chromosome_3A	2508	1	83	40.23125996810207	0.8180039138943248	4.593639575971731	48	0	4.593639575971731	48	0	NA	NA	NA	4.92040520984081	37	0	unmethylated (<10%)	P0AFQ9	Uncharacterized metal-dependent hydrolase YcfH (EC 3.1.-.-)	NA	hit, no GO BP
GN015799	Chromosome_3A	568	2	6	52.816901408450704	0.15279770444763272	0	6	0	0	6	0	NA	NA	NA	0.8025682182985554	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016376	Chromosome_3A	12823	8	399	36.69968026202917	0.9243157523341499	1.6933610465827118	390	0	0.713436385255648	39	0	1.8056691196511312	351	0	0.3827018752391887	60	0	unmethylated (<10%)	Q9XT77	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)	biotin import across plasma membrane [GO:1905135]; biotin transport [GO:0015878]; iodide transmembrane transport [GO:1904200]; pantothenate transmembrane transport [GO:0015887]	hit with GO BP
GN016377	Chromosome_3A	1104	1	46	42.66304347826087	0.9257017863652934	0.541795665634675	46	0	0.541795665634675	46	0	NA	NA	NA	0.6616257088846881	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016378	Chromosome_3A	1092	1	44	42.94871794871795	0.8826187589551416	0.6493506493506493	44	0	0.6493506493506493	44	0	NA	NA	NA	1.5042306486994672	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016379	Chromosome_3A	873	1	34	45.131729667812145	0.7648423005565863	6.7114093959731544	22	0	6.7114093959731544	22	0	NA	NA	NA	1.5696533682145193	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016380	Chromosome_3A	650	2	10	35.84615384615385	0.4836309523809524	0.18796992481203006	10	0	0.22701475595913734	8	0	0	2	0	0.5124450951683748	55	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN016381	Chromosome_3A	357	1	7	41.1764705882353	0.4626064420584969	0.8955223880597015	7	0	0.8955223880597015	7	0	NA	NA	NA	0.8167432363450741	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016382	Chromosome_3A	438	2	9	41.78082191780822	0.4909090909090909	0.2994011976047904	9	0	0.17271157167530224	8	0	1.1235955056179776	1	0	0.6980802792321117	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016383	Chromosome_3A	1131	1	52	42.705570291777185	1.0099601593625498	0.5770340450086555	52	0	0.5770340450086555	52	0	NA	NA	NA	0.47184649260773825	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016387	Chromosome_3A	774	2	25	40.56847545219638	0.788894324853229	0.6993006993006993	25	0	0.7727975270479135	18	0	0.5649717514124294	7	0	0.6602641056422569	51	0	unmethylated (<10%)	Q9NRD8	Dual oxidase 2 (EC 1.-.-.-) (EC 1.11.1.-) (EC 1.6.3.1) (Large NOX 2) (Long NOX 2) (NADH/NADPH thyroid oxidase p138-tox) (NADPH oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (p138 thyroid oxidase)	cuticle development [GO:0042335]; cytokine-mediated signaling pathway [GO:0019221]; defense response [GO:0006952]; hydrogen peroxide biosynthetic process [GO:0050665]; positive regulation of cell motility [GO:2000147]; positive regulation of wound healing [GO:0090303]; regulation of thyroid hormone generation [GO:2000609]; response to cAMP [GO:0051591]; response to oxidative stress [GO:0006979]; response to virus [GO:0009615]; superoxide anion generation [GO:0042554]; thyroid hormone generation [GO:0006590]	hit with GO BP
GN016386	Chromosome_3A	3683	5	88	35.378767309258755	0.7665439959130772	0.8430609597924773	88	0	0.7159904534606205	34	0	0.9152542372881356	54	0	1.1020408163265305	36	0	unmethylated (<10%)	Q9VQH2	Dual oxidase (EC 1.11.1.-) (EC 1.6.3.1)	adult chitin-based cuticle development [GO:0008365]; adult chitin-containing cuticle pigmentation [GO:0048085]; cuticle development [GO:0042335]; cytokine-mediated signaling pathway [GO:0019221]; defense response [GO:0006952]; defense response to bacterium [GO:0042742]; imaginal disc-derived wing morphogenesis [GO:0007476]; mucosal immune response [GO:0002385]; negative regulation of apoptotic process [GO:0043066]; reactive oxygen species metabolic process [GO:0072593]; response to cAMP [GO:0051591]; response to oxidative stress [GO:0006979]; response to wounding [GO:0009611]; superoxide anion generation [GO:0042554]; wing disc development [GO:0035220]	hit with GO BP
GN016385	Chromosome_3A	258	1	8	45.348837209302324	0.6106508875739645	2.112676056338028	8	0	2.112676056338028	8	0	NA	NA	NA	0.7271577616187164	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015807	Chromosome_3A	2961	1	81	44.44444444444444	0.5906424539732261	0	21	0	0	21	0	NA	NA	NA	1.1954992967651195	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015808	Chromosome_3A	919	3	7	33.732317736670296	0.27276967435549526	NA	0	NA	NA	NA	NA	NA	NA	NA	55.893536121673	10	0.6	NA	NA	NA	NA	no Swiss-Prot hit
GN015809	Chromosome_3A	13804	13	400	37.93103448275862	0.8062212903395369	0.5536498766323644	385	0	0.5005775895263765	59	0	0.5634807417974322	326	0	0.814176245210728	41	0	unmethylated (<10%)	Q6PGE7	Sodium-dependent proline transporter (Solute carrier family 6 member 7)	glycine import across plasma membrane [GO:1903804]; proline transmembrane transport [GO:0035524]; proline transport [GO:0015824]; protein catabolic process [GO:0030163]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN015810	Chromosome_3A	510	1	11	49.6078431372549	0.35150375939849626	6.9105691056910565	11	0	6.9105691056910565	11	0	NA	NA	NA	1.1976047904191616	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019392	Chromosome_3A	898	2	10	33.073496659242764	0.40926077841582353	65.99526066350711	10	1	64.9402390438247	8	1	74.72527472527473	2	1	8.71177015755329	24	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016389	Chromosome_3A	10752	4	279	34.291294642857146	0.8831141303771846	1.3386417402342623	277	0	0.8053691275167785	20	0	1.3625949596044857	257	0	1.1013215859030836	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015812	Chromosome_3A	13777	3	367	35.00762139798214	0.86976279410768	1.114913918274217	342	0	0.6688963210702341	16	0	1.129187627100503	326	0	0.8896077638495754	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015813	Chromosome_3A	14061	8	319	34.841049711969276	0.7479138091279167	0.6200543285697413	313	0	0.08613264427217916	28	0	0.659354593292335	285	0	0.9890498057223596	58	0	unmethylated (<10%)	B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Skeletal organic matrix MAM and LDL-receptor 2) (SOM MAM and LDL-receptor 2)	NA	hit, no GO BP
GN016391	Chromosome_3A	1935	2	14	30.852713178294575	0.3049645390070922	78.544061302682	14	0.9285714285714286	80.23255813953489	7	1	77.22095671981776	7	0.8571428571428571	87.38019169329074	9	1	methylated (>=50%)	Q9FV50	Methionine aminopeptidase 1D, chloroplastic/mitochondrial (MAP 1D) (MetAP 1D) (EC 3.4.11.18) (Peptidase M 1D)	N-terminal protein amino acid modification [GO:0031365]; proteolysis [GO:0006508]	hit with GO BP
GN016392	Chromosome_3A	3251	5	63	37.77299292525377	0.5494338347135372	91.86925985953539	63	1	89.20134983127109	16	1	92.7124066832563	47	1	80.24691358024691	14	0.8571428571428571	methylated (>=50%)	Q9QXT0	Protein canopy homolog 2 (MIR-interacting saposin-like protein) (Putative secreted protein ZSIG9) (Transmembrane protein 4)	negative regulation of gene expression [GO:0010629]; regulation of low-density lipoprotein particle clearance [GO:0010988]	hit with GO BP
GN016393	Chromosome_3A	1575	1	80	45.96825396825397	0.9616265225753274	0.8410092110532639	80	0	0.8410092110532639	80	0	NA	NA	NA	0.8120300751879699	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015816	Chromosome_3A	4840	5	81	34.02892561983471	0.578177216832679	74.22083704363313	80	0.875	22.580645161290324	7	0.2857142857142857	78.60247947190469	73	0.9315068493150684	50.242013552758955	50	0.66	methylated (>=50%)	A6QQL9	Signal recognition particle 14 kDa protein (SRP14)	SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	hit with GO BP
GN016398	Chromosome_3A	834	1	3	41.84652278177458	0.09612724757952974	94.28571428571429	3	1	94.28571428571429	3	1	NA	NA	NA	79.60122699386503	15	0.9333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN016397	Chromosome_3A	807	1	21	51.301115241635685	0.8091191215087133	NA	0	NA	NA	NA	NA	NA	NA	NA	60.03365586874211	38	0.6842105263157895	NA	NA	NA	NA	no Swiss-Prot hit
GN016396	Chromosome_3A	1476	3	18	38.82113821138211	0.3243956043956044	79.41690962099125	18	0.9444444444444444	79.22606924643584	10	0.9	79.67257844474761	8	1	77.5808133472367	41	0.9512195121951219	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016404	Chromosome_3A	1067	2	17	42.549203373945645	0.3574539363484087	94.81132075471699	17	1	94.81132075471699	17	1	NA	NA	NA	86.01845280340667	33	1	methylated (>=50%)	O95198	Kelch-like protein 2 (Actin-binding protein Mayven)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN016403	Chromosome_3A	24555	11	324	33.98493178578701	0.45982497588118354	91.22823753875507	293	0.9897610921501706	94.11071849234393	36	1	90.82962319470083	257	0.9883268482490273	95.77572964669739	24	1	methylated (>=50%)	Q16975	Calcium-independent protein kinase C (EC 2.7.11.13) (APL II)	learning or memory [GO:0007611]	hit with GO BP
GN013174	Chromosome_3A	2720	4	35	36.50735294117647	0.38632914269018187	94.44444444444444	7	1	94.44444444444444	7	1	NA	NA	NA	96.63594470046083	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015820	Chromosome_3A	1165	2	31	44.46351931330472	0.5536393181260731	44.05172413793103	31	0.4838709677419355	47.274436090225564	29	0.5172413793103449	8.333333333333334	2	0	42.70787984327384	42	0.5476190476190477	sparse (10-50%)	Q3T0V9	Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase)	2'-deoxyribonucleoside catabolic process [GO:0046121]; deoxyribonucleotide catabolic process [GO:0009264]; deoxyribose phosphate catabolic process [GO:0046386]	hit with GO BP
GN016401	Chromosome_3A	3014	3	33	35.73324485733245	0.34752620545073376	86.94158075601375	33	1	76.83823529411765	4	1	88.80597014925372	29	1	46.73068129858253	40	0.6	methylated (>=50%)	Q2TBG7	Iron-sulfur cluster assembly 2 homolog, mitochondrial (HESB-like domain-containing protein 1)	iron-sulfur cluster assembly [GO:0016226]; protein maturation [GO:0051604]	hit with GO BP
GN016400	Chromosome_3A	4956	7	71	34.70540758676352	0.4826890866965436	82.36652977412732	66	0.9090909090909091	82.1608040201005	30	0.9	82.45743893412288	36	0.9166666666666666	83.74844333748443	29	0.9655172413793104	methylated (>=50%)	Q6YHU6	tRNA (32-2'-O)-methyltransferase regulator THADA (Gene inducing thyroid adenomas protein) (Thyroid adenoma-associated protein)	adaptive thermogenesis [GO:1990845]; lipid homeostasis [GO:0055088]; negative regulation of endoplasmic reticulum calcium ion concentration [GO:0032471]; tRNA methylation [GO:0030488]; tRNA nucleoside ribose methylation [GO:0002128]	hit with GO BP
GN016399	Chromosome_3A	696	2	11	36.7816091954023	0.47470238095238093	69.86754966887418	11	0.9090909090909091	91.1042944785276	9	1	44.96402877697842	2	0.5	93.37487700885536	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016406	Chromosome_3A	1830	4	20	33.387978142076506	0.3966447753430002	93.30453563714903	20	1	94.0389294403893	13	1	92.23985890652557	7	1	74.501287001287	45	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016405	Chromosome_3A	8613	12	162	35.7482874724254	0.593048698384201	88.90988661229362	162	0.9876543209876543	95.82875960482986	82	1	84.97659906396255	80	0.975	15.056285178236397	30	0.23333333333333334	methylated (>=50%)	Q96NE9	FERM domain-containing protein 6 (Willin)	positive regulation of hippo signaling [GO:0035332]	hit with GO BP
GN015823	Chromosome_3A	11416	17	166	36.720392431674846	0.4334627964958027	85.53755522827687	166	0.927710843373494	94.12317818523742	38	1	83.27128319682303	128	0.90625	50.78947368421053	35	0.4857142857142857	methylated (>=50%)	O00471	Exocyst complex component 5 (Exocyst complex component Sec10) (hSec10)	exocytosis [GO:0006887]; Golgi to plasma membrane transport [GO:0006893]; kidney development [GO:0001822]; membrane fission [GO:0090148]; mitotic cytokinesis [GO:0000281]; post-Golgi vesicle-mediated transport [GO:0006892]; protein localization to plasma membrane [GO:0072659]; vesicle docking involved in exocytosis [GO:0006904]; vesicle tethering involved in exocytosis [GO:0090522]	hit with GO BP
GN015824	Chromosome_3A	3519	4	54	34.66894003978403	0.5262784740012463	80.33631678871711	54	0.8333333333333334	80.0185873605948	17	0.8823529411764706	80.46725392569897	37	0.8108108108108109	60.95299008634474	60	0.65	methylated (>=50%)	Q6DBR9	KxDL motif-containing protein 1	lysosome localization [GO:0032418]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN016408	Chromosome_3A	1122	3	51	41.62210338680927	1.058490566037736	0.5482456140350878	51	0	0.5633802816901409	50	0	0	1	0	8.788190868520426	46	0.13043478260869565	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015826	Chromosome_3A	592	3	11	34.96621621621622	0.6085981308411215	95.57046979865771	11	1	97.00460829493088	7	1	93.56913183279742	4	1	89.96530557779558	46	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015827	Chromosome_3A	2795	5	40	35.42039355992844	0.4599138587101843	94.45602334305961	40	1	92.96346414073072	16	1	95.12048192771084	24	1	88.62806468440272	26	0.9615384615384616	methylated (>=50%)	Q8TDJ6	DmX-like protein 2 (Rabconnectin-3)	vacuolar acidification [GO:0007035]	hit with GO BP
GN015828	Chromosome_3A	20391	17	280	37.604825658378694	0.3915639432091416	90.87036774101945	279	0.992831541218638	92.81822684497276	148	0.9864864864864865	89.40092165898618	131	1	93.80603096984515	18	1	methylated (>=50%)	Q8TDJ6	DmX-like protein 2 (Rabconnectin-3)	vacuolar acidification [GO:0007035]	hit with GO BP
GN015829	Chromosome_3A	1558	3	31	39.345314505776635	0.5492403566229985	92.82485875706215	31	1	91.41414141414141	12	1	93.5374149659864	19	1	90.12345679012346	31	1	methylated (>=50%)	Q8TDJ6	DmX-like protein 2 (Rabconnectin-3)	vacuolar acidification [GO:0007035]	hit with GO BP
GN015830	Chromosome_3A	3393	3	39	32.68493958149131	0.4325684024713151	91.28419100602689	39	1	94.27917620137299	8	1	90.52325581395348	31	1	89.84709480122324	21	0.9523809523809523	methylated (>=50%)	Q8BPN8	DmX-like protein 2 (Rabconnectin-3)	brain development [GO:0007420]; chemical synaptic transmission [GO:0007268]; corpus callosum development [GO:0022038]; glucose homeostasis [GO:0042593]; sensory perception of smell [GO:0007608]; spermatogenesis [GO:0007283]; vacuolar acidification [GO:0007035]	hit with GO BP
GN015831	Chromosome_3A	761	2	12	40.473061760841	0.3851214574898785	92.32876712328768	12	1	92.67515923566879	11	1	90.19607843137256	1	1	91.86006234845861	46	1	methylated (>=50%)	Q6PNC0	DmX-like protein 1 (X-like 1 protein)	proton-transporting V-type ATPase complex assembly [GO:0070070]; regulation of protein localization [GO:0032880]; vacuolar acidification [GO:0007035]	hit with GO BP
GN015832	Chromosome_3A	363	1	11	39.39393939393939	0.7814090019569472	0.7915567282321899	11	0	0.7915567282321899	11	0	NA	NA	NA	14.898632720414899	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016410	Chromosome_3A	213	1	9	46.478873239436616	0.8452380952380952	0.21231422505307856	9	0	0.21231422505307856	9	0	NA	NA	NA	0.5719733079122974	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016416	Chromosome_3A	1077	1	15	37.697307335190345	0.40201567749160133	4.285714285714286	4	0	4.285714285714286	4	0	NA	NA	NA	2.9411764705882355	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016415	Chromosome_3A	1833	1	59	38.95253682487725	0.8524035846870492	0.6213109661385523	59	0	0.6213109661385523	59	0	NA	NA	NA	0.7689619014330653	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015834	Chromosome_3A	2601	4	112	42.060745866974244	0.974548374146929	0.5571030640668524	88	0	0.5424954792043399	77	0	0.6060606060606061	11	0	0.2734107997265892	30	0	unmethylated (<10%)	H2A0L1	Tyrosinase-like protein 2 (EC 1.14.18.-) (Tyrosinase 2)	NA	hit, no GO BP
GN015835	Chromosome_3A	2597	4	113	42.04851752021563	0.985128788718021	0.6064474944142993	93	0	0.6342494714587738	83	0	0.3389830508474576	10	0	0.4646840148698885	29	0	unmethylated (<10%)	H2A0L1	Tyrosinase-like protein 2 (EC 1.14.18.-) (Tyrosinase 2)	NA	hit, no GO BP
GN015836	Chromosome_3A	2956	4	89	39.073071718538564	0.7913490750488795	0.5731373037627709	88	0	0.6401137980085349	73	0	0.4163197335553705	15	0	0.6618863761720905	28	0	unmethylated (<10%)	H2A0L1	Tyrosinase-like protein 2 (EC 1.14.18.-) (Tyrosinase 2)	NA	hit, no GO BP
GN015837	Chromosome_3A	5556	4	74	34.80921526277898	0.4401366836236576	71.11612175873732	74	0.8378378378378378	71.61290322580645	14	0.7857142857142857	70.98430813124108	60	0.85	13.059569968276348	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016412	Chromosome_3A	3978	6	95	38.23529411764706	0.6546866283924482	6.215888417222559	94	0	5.968468468468468	54	0	6.504599211563732	40	0	8.221476510067115	54	0	unmethylated (<10%)	Q8R1B8	Nuclear receptor ROR-beta (Nuclear receptor RZR-beta) (Nuclear receptor subfamily 1 group F member 2) (Retinoid-related orphan receptor-beta)	amacrine cell differentiation [GO:0035881]; cellular response to retinoic acid [GO:0071300]; eye photoreceptor cell development [GO:0042462]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; retinal cone cell development [GO:0046549]; retinal rod cell development [GO:0046548]; retinal rod cell differentiation [GO:0060221]	hit with GO BP
GN015839	Chromosome_3A	1959	2	59	36.14088820826952	0.9277131642948301	0.6376195536663124	59	0	0.6688963210702341	31	0	0.5984440454817475	28	0	0.5837449483610238	55	0	unmethylated (<10%)	P00182	Cytochrome P450 2C3 (EC 1.14.14.1) (CYPIIC3) (Cytochrome P450 PBc3) (Cytochrome P450 form 3B)	xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN015840	Chromosome_3A	2115	1	0	51.016548463356976	0	NA	0	NA	NA	NA	NA	NA	NA	NA	87.62338648443432	23	1	NA	NA	NA	NA	no Swiss-Prot hit
GN015841	Chromosome_3A	13130	14	203	37.10586443259711	0.4629264900404606	78.50516137462434	203	0.9261083743842364	92.34773555439875	48	1	76.51849084796415	155	0.9032258064516129	83.37662337662337	13	1	methylated (>=50%)	Q15751	Probable E3 ubiquitin-protein ligase HERC1 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 1) (HECT-type E3 ubiquitin transferase HERC1) (p532) (p619)	protein ubiquitination [GO:0016567]	hit with GO BP
GN015842	Chromosome_3A	11135	7	53	33.32734620565783	0.20224778785324093	88.26399589111453	52	1	93.16888045540797	7	1	87.4962874962875	45	1	23.600605143721634	37	0.3783783783783784	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015843	Chromosome_3A	1077	1	38	40.85422469823584	0.8519328045962655	0.5899705014749262	38	0	0.5899705014749262	38	0	NA	NA	NA	2.2525597269624575	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016420	Chromosome_3A	11418	7	289	34.78717813977929	0.8395359682605832	2.1629901960784315	282	0	0.9110021023125437	50	0	2.4283380365364624	232	0	0.5921281783350749	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016419	Chromosome_3A	3209	3	92	34.80835151137426	0.9522562332677483	3.5760849320171353	92	0	0.6639004149377593	30	0	4.418828049951969	62	0	1.0894941634241244	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016418	Chromosome_3A	651	2	24	45.00768049155146	0.7286633709542021	0.9273570324574961	24	0	0.7299270072992701	21	0	2.0202020202020203	3	0	0.8622942252417037	58	0	unmethylated (<10%)	A2BEA6	AT-rich interactive domain-containing protein 3A (ARID domain-containing protein 3A) (Bright homolog)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016417	Chromosome_3A	4179	3	110	33.165829145728644	0.9584382766500426	2.408256880733945	106	0	0.8064516129032258	31	0	2.8425655976676385	75	0	65.650493774152	72	0.6944444444444444	unmethylated (<10%)	A6NKF2	AT-rich interactive domain-containing protein 3C (ARID domain-containing protein 3C)	macrophage differentiation [GO:0030225]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016428	Chromosome_3A	24746	21	299	36.2846520649802	0.3676392564509312	85.6774533017627	298	0.9697986577181208	91.73166926677067	93	0.978494623655914	84.14143413153901	205	0.9658536585365853	40.41025641025641	19	0.47368421052631576	methylated (>=50%)	Q05920	Pyruvate carboxylase, mitochondrial (EC 6.4.1.1) (Pyruvic carboxylase) (PCB)	branched-chain amino acid catabolic process [GO:0009083]; gluconeogenesis [GO:0006094]; glyceraldehyde-3-phosphate biosynthetic process [GO:0046166]; host-mediated activation of viral process [GO:0044794]; NAD+ metabolic process [GO:0019674]; NADP+ metabolic process [GO:0006739]; negative regulation of gene expression [GO:0010629]; positive regulation of phospholipid biosynthetic process [GO:0071073]; viral release from host cell [GO:0019076]; viral RNA genome packaging [GO:0019074]	hit with GO BP
GN016429	Chromosome_3A	20005	11	329	36.96075981004749	0.4823269875552632	85.75556608242539	319	0.9561128526645768	90.76120319214242	62	0.9354838709677419	84.8420345059377	257	0.9610894941634242	67.74871555347968	55	0.6363636363636364	methylated (>=50%)	Q8R2K4	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (TAF6L) (PCAF-associated factor 65-alpha) (PAF65-alpha)	positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA repair [GO:0006282]; regulation of DNA-templated transcription [GO:0006355]; regulation of RNA splicing [GO:0043484]; regulation of somatic stem cell population maintenance [GO:1904672]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN016430	Chromosome_3A	189	1	24	56.613756613756614	1.5849056603773586	0.9174311926605505	24	0	0.9174311926605505	24	0	NA	NA	NA	0	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016431	Chromosome_3A	309	1	13	56.63430420711974	0.5275807722616234	0	4	0	0	4	0	NA	NA	NA	0.635386119257087	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016432	Chromosome_3A	17247	11	574	36.15121470400649	1.0215698475350206	0.8846936886914677	557	0	0.804093567251462	96	0	0.8991314215878835	461	0	0.582010582010582	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016433	Chromosome_3A	456	1	13	47.80701754385965	0.498989898989899	79.56989247311827	13	1	79.56989247311827	13	1	NA	NA	NA	60.87187666135035	24	0.7083333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001971	Chromosome_3A	162	1	5	47.53086419753087	0.5818965517241379	39.44636678200692	5	0	39.44636678200692	5	0	NA	NA	NA	77.95185326709974	39	0.9743589743589743	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016434	Chromosome_3A	3465	2	35	35.35353535353536	0.32712133227597145	80.67612687813022	35	0.8857142857142857	79.47327652982185	16	0.8125	82.08144796380091	19	0.9473684210526315	82.14424951267057	45	0.9777777777777777	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016435	Chromosome_3A	543	1	5	41.988950276243095	0.20949074074074073	74.59016393442623	5	1	74.59016393442623	5	1	NA	NA	NA	32.45382585751979	8	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016436	Chromosome_3A	1691	2	50	41.57303370786517	0.6844934505594145	85.89921405455387	50	0.96	87.88732394366197	18	1	84.92773571920165	32	0.9375	44.9952335557674	16	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015851	Chromosome_3A	3879	4	68	39.31425625161124	0.4558403179815087	62.7689429373246	39	0.7692307692307693	81.54158215010142	13	0.9230769230769231	57.142857142857146	26	0.6923076923076923	85.1585014409222	13	0.9230769230769231	methylated (>=50%)	P07686	Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (Cervical cancer proto-oncogene 7 protein) (HCC-7) (N-acetyl-beta-glucosaminidase subunit beta) [Cleaved into: Beta-hexosaminidase subunit beta chain B; Beta-hexosaminidase subunit beta chain A]	astrocyte cell migration [GO:0043615]; carbohydrate metabolic process [GO:0005975]; chondroitin sulfate proteoglycan catabolic process [GO:0030207]; dermatan sulfate proteoglycan catabolic process [GO:0030209]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]; hyaluronan catabolic process [GO:0030214]; N-acetylglucosamine metabolic process [GO:0006044]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; single fertilization [GO:0007338]	hit with GO BP
GN015852	Chromosome_3A	12868	14	174	34.659620764687595	0.46083361324613226	77.61493040911007	173	0.861271676300578	79.30214115781126	22	0.9090909090909091	77.35619603551015	151	0.8543046357615894	0.562390158172232	60	0	methylated (>=50%)	Q9HAD4	WD repeat-containing protein 41	negative regulation of exocytosis [GO:0045920]; negative regulation of immune response [GO:0050777]; regulation of autophagy [GO:0010506]	hit with GO BP
GN017549	Chromosome_3A	168	1	3	45.23809523809524	0.35795454545454547	6.382978723404255	3	0	6.382978723404255	3	0	NA	NA	NA	0.7320644216691069	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015853	Chromosome_3A	189	1	8	41.26984126984127	1.018181818181818	0	8	0	0	8	0	NA	NA	NA	0.7020280811232449	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015854	Chromosome_3A	324	1	6	51.54320987654321	0.28421052631578947	0	5	0	0	5	0	NA	NA	NA	1.3032145960034753	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016447	Chromosome_3A	2663	3	72	34.84791588434097	0.8927628546285044	0.7984969469234382	56	0	0.47619047619047616	13	0	0.933955970647098	43	0	1.010886469673406	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016446	Chromosome_3A	481	2	9	40.95634095634096	0.4471183639743855	0	1	0	0	1	0	NA	NA	NA	0.6661732050333087	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016445	Chromosome_3A	303	1	21	45.87458745874587	1.3424050632911393	0	21	0	0	21	0	NA	NA	NA	1.2910166756320602	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015856	Chromosome_3A	12157	5	351	36.97458254503578	0.8465917748340587	1.0430024792681885	351	0	0.5347593582887701	195	0	1.5585981227934211	156	0	1.1764705882352942	41	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN015857	Chromosome_3A	354	1	15	43.220338983050844	0.9215550156195765	0.15128593040847202	15	0	0.15128593040847202	15	0	NA	NA	NA	5.724098454493418	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015858	Chromosome_3A	1527	1	55	40.47151277013752	0.8931059051224518	0.37509377344336087	55	0	0.37509377344336087	55	0	NA	NA	NA	0.4801920768307323	53	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN016443	Chromosome_3A	3588	1	113	38.87959866220736	0.8410235560607695	0.6039689387402933	113	0	0.6039689387402933	113	0	NA	NA	NA	0.4024144869215292	58	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN016442	Chromosome_3A	3582	1	124	39.58682300390843	0.8938690494158843	0.44503782821539833	124	0	0.44503782821539833	124	0	NA	NA	NA	0.9712509712509713	61	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN016441	Chromosome_3A	1569	1	55	40.8540471637986	0.8482915224913494	0.39886039886039887	55	0	0.39886039886039887	55	0	NA	NA	NA	0.49673202614379086	54	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN002737	Chromosome_3A	1231	1	28	38.66774979691308	0.621179354094579	0.3246753246753247	12	0	0.3246753246753247	12	0	NA	NA	NA	0.7653734494589601	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015860	Chromosome_3A	7682	4	201	36.448841447539706	0.7893450215626975	0.5003625815808557	200	0	0.48375319459656807	134	0	0.5645730416372619	66	0	0.4355716878402904	47	0	unmethylated (<10%)	Q9LQV2	RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)	positive regulation of post-transcriptional gene silencing [GO:0060148]; response to salicylic acid [GO:0009751]; response to virus [GO:0009615]; siRNA processing [GO:0030422]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN015861	Chromosome_3A	501	1	20	48.902195608782435	0.6709521896343913	0.9009009009009009	20	0	0.9009009009009009	20	0	NA	NA	NA	0.5045045045045045	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015862	Chromosome_3A	990	1	51	44.74747474747475	1.0306184935701164	0.8739076154806492	51	0	0.8739076154806492	51	0	NA	NA	NA	1.4553014553014554	45	0	unmethylated (<10%)	P49578	Muscarinic acetylcholine receptor M3	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of smooth muscle contraction [GO:0045987]; saliva secretion [GO:0046541]	hit with GO BP
GN016450	Chromosome_3A	3217	3	52	39.32235001554243	0.41868101614316106	68.52631578947368	52	0.8653846153846154	73.72346528973036	39	0.8974358974358975	60.34327009936766	13	0.7692307692307693	61.00094428706327	20	0.7	methylated (>=50%)	Q6AYP4	Zinc finger C2HC domain-containing protein 1C	NA	hit, no GO BP
GN016451	Chromosome_3A	3686	6	124	40.23331524688009	0.8344360221414071	1.5284249767008389	124	0	0.9514271407110666	48	0	1.8705463182897861	76	0	1.5957446808510638	27	0	unmethylated (<10%)	Q02338	D-beta-hydroxybutyrate dehydrogenase, mitochondrial (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (BDH) (Short chain dehydrogenase/reductase family 9C member 1)	ketone biosynthetic process [GO:0042181]; ketone catabolic process [GO:0042182]	hit with GO BP
GN016452	Chromosome_3A	921	2	18	35.504885993485345	0.6237959060806743	0.6896551724137931	18	0	0.7851934941110488	15	0	0.25510204081632654	3	0	0.5068790731354091	62	0	unmethylated (<10%)	Q8BJ25	THAP domain-containing protein 3	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN016453	Chromosome_3A	2286	3	40	37.75153105861767	0.4912167606768735	0.9399264405394361	40	0	0.5025125628140703	14	0	1.150817686250757	26	0	0.8145663632007667	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016454	Chromosome_3A	9093	1	243	53.24975255691191	0.3916189327705758	0.423728813559322	14	0	0.423728813559322	14	0	NA	NA	NA	0.5752961082910322	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016455	Chromosome_3A	492	1	16	48.78048780487805	0.5472747497219133	0.5263157894736842	12	0	0.5263157894736842	12	0	NA	NA	NA	0.5256241787122208	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016465	Chromosome_3A	996	1	53	41.06425702811245	1.3442322383498855	0	5	0	0	5	0	NA	NA	NA	0.3042155584528466	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016464	Chromosome_3A	210	1	13	50.476190476190474	0.9722222222222222	0.5555555555555556	13	0	0.5555555555555556	13	0	NA	NA	NA	0.5741626794258373	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016463	Chromosome_3A	3571	2	93	41.52898347801736	0.6047913024475524	38.42857142857143	93	0.5376344086021505	69.82082866741321	64	0.78125	5.717619603267211	29	0	0.5366246310705661	64	0	sparse (10-50%)	A1L3F4	RNA-binding protein MEX3B (RING finger and KH domain-containing protein 3)	NA	hit, no GO BP
GN016462	Chromosome_3A	1749	1	1	37.67867352773013	0.018693087084776197	0	1	0	0	1	0	NA	NA	NA	0.5638474295190713	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016461	Chromosome_3A	562	2	24	46.44128113879004	0.7922932330827067	1.8083182640144666	24	0	1.8867924528301887	23	0	0	1	0	0.87073007367716	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016460	Chromosome_3A	1212	1	35	48.102310231023104	0.5051202667301739	0.7923930269413629	24	0	0.7923930269413629	24	0	NA	NA	NA	2.0671834625322996	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015720	Chromosome_3A	375	1	8	43.733333333333334	0.4467609828741623	0.9090909090909091	8	0	0.9090909090909091	8	0	NA	NA	NA	0	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016459	Chromosome_3A	1458	2	55	39.16323731138546	0.989413680781759	0.4407227853680035	55	0	0.7005253940455342	31	0	0.1774622892635315	24	0	0.6071118820468343	69	0	unmethylated (<10%)	Q3SZZ7	Fibrinogen-like protein 1	blood coagulation [GO:0007596]; hepatocyte proliferation [GO:0072574]; negative regulation of T cell activation [GO:0050868]; regulation of immune response [GO:0050776]	hit with GO BP
GN016458	Chromosome_3A	3096	2	108	41.343669250645995	0.8192161820480405	0.44142614601018676	102	0	0.5988023952095808	59	0	0.3602676273803397	43	0	0.7317073170731707	52	0	unmethylated (<10%)	A7M7C7	SKI family transcriptional corepressor 2 (Fussel-18 homolog) (LBX1 corepressor 1-like protein) (Ladybird homeobox corepressor 1-like protein) (Transcriptional corepressor Corl2)	cell development [GO:0048468]; cerebellar Purkinje cell differentiation [GO:0021702]; cerebellum morphogenesis [GO:0021587]; negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of smoothened signaling pathway [GO:0045880]; regulation of cerebellar granule cell precursor proliferation [GO:0021936]; regulation of dendrite morphogenesis [GO:0048814]	hit with GO BP
GN016457	Chromosome_3A	11403	9	275	34.9381741646935	0.7979119291182607	2.046398541181238	247	0	2.015810276679842	69	0	2.0569404713254325	178	0	1.187335092348285	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016456	Chromosome_3A	3883	3	110	34.76693278392995	0.9395711844012662	1.314021203523966	110	0	1.4991181657848325	24	0	1.276289771705914	86	0	1.4492753623188406	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016466	Chromosome_3A	391	1	22	43.47826086956522	1.210867117117117	0.8298755186721992	22	0	0.8298755186721992	22	0	NA	NA	NA	0.6161652772743748	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016467	Chromosome_3A	1656	1	62	41.30434782608695	0.9897145721474084	0.5308880308880309	62	0	0.5308880308880309	62	0	NA	NA	NA	0.7876154263986963	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016501	Chromosome_3A	363	1	18	46.5564738292011	0.9158957106812448	0.5357142857142857	18	0	0.5357142857142857	18	0	NA	NA	NA	1.2287581699346406	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016500	Chromosome_3A	1599	4	18	31.45716072545341	0.45724907063197023	87.62102351313969	18	0.9444444444444444	92.40986717267552	8	1	84.87486398258977	10	0.9	90.35265504661533	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002963	Chromosome_3A	3887	5	41	39.233341908927194	0.2825085000549534	81.9364161849711	41	0.975609756097561	81.61634103019539	23	1	82.53311258278146	18	0.9444444444444444	69.9343724364233	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016499	Chromosome_3A	52788	35	788	33.32765022353565	0.5487750994002345	76.1481262800524	768	0.9088541666666666	89.04216553878189	71	0.971830985915493	75.16433323403832	697	0.9024390243902439	78.54798223595289	42	0.9523809523809523	methylated (>=50%)	A0AVT1	Ubiquitin-like modifier-activating enzyme 6 (Ubiquitin-activating enzyme 6) (EC 6.2.1.45) (Monocyte protein 4) (MOP-4) (Ubiquitin-activating enzyme E1-like protein 2) (E1-L2)	DNA damage response [GO:0006974]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN016498	Chromosome_3A	2791	7	101	40.34396273737012	0.8894705288400858	0.29721696838692246	101	0	0.16882386043894204	48	0	0.4158004158004158	53	0	1.0830324909747293	14	0	unmethylated (<10%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN016497	Chromosome_3A	1530	1	72	44.052287581699346	0.9699915469146239	0.6060606060606061	72	0	0.6060606060606061	72	0	NA	NA	NA	0.4917299955297273	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015623	Chromosome_3A	1821	1	38	39.59362987369577	0.53629388514299	4.149377593360996	15	0	4.149377593360996	15	0	NA	NA	NA	0.6944444444444444	63	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN016496	Chromosome_3A	2718	5	59	35.356880058866814	0.6958344181202811	0.6025911419102139	59	0	0.45454545454545453	17	0	0.6560065600656007	42	0	2.9391660970608338	54	0	unmethylated (<10%)	O95714	E3 ubiquitin-protein ligase HERC2 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 2) (HECT-type E3 ubiquitin transferase HERC2)	DNA damage response [GO:0006974]; intracellular protein transport [GO:0006886]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]	hit with GO BP
GN015879	Chromosome_3A	357	1	17	42.296918767507	1.065858798735511	0.07256894049346879	17	0	0.07256894049346879	17	0	NA	NA	NA	0.5976095617529881	57	0	unmethylated (<10%)	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN015880	Chromosome_3A	1961	4	9	34.82916879143294	0.15137402223137095	19.26829268292683	5	0	17.529215358931552	4	0	23.981900452488688	1	0	22.535211267605632	5	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020394	Chromosome_3A	3641	7	30	31.035429826970613	0.3423536933955168	13.427345187001839	30	0	2.0833333333333335	18	0	20.456802383316784	12	0	6.354334948842219	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016495	Chromosome_3A	2524	8	26	34.865293185419965	0.341003097004843	31.687898089171973	21	0.3333333333333333	30.738522954091817	18	0.3333333333333333	35.43307086614173	3	0.3333333333333333	4.0827289820037604	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016494	Chromosome_3A	900	1	33	40.55555555555556	0.8966308416857868	5	5	0	5	5	0	NA	NA	NA	1.8795180722891567	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016493	Chromosome_3A	1050	1	35	40.38095238095238	0.8181393174380551	2.236106543900033	22	0	2.236106543900033	22	0	NA	NA	NA	0.8955223880597015	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001248	Chromosome_3A	870	1	8	39.88505747126437	0.23553299492385787	2.7777777777777777	2	0	2.7777777777777777	2	0	NA	NA	NA	0.5471956224350205	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016492	Chromosome_3A	3290	2	91	35.653495440729486	0.8735651636019864	14.20965669175693	91	0	16.48148148148148	35	0	12.716763005780347	56	0	11.941143180531975	33	0	sparse (10-50%)	Q28113	Galactoside alpha-(1,2)-fucosyltransferase 2 (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (Secretor factor) (Se) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.344)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN016491	Chromosome_3A	1187	2	40	36.815501263689974	1.0129714968424646	0.7434944237918215	40	0	0.7261410788381742	15	0	0.7575757575757576	25	0	0.3303964757709251	54	0	unmethylated (<10%)	Q4U2R1	E3 ubiquitin-protein ligase HERC2 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 2) (HECT-type E3 ubiquitin transferase HERC2)	DNA damage response [GO:0006974]; negative regulation of Notch signaling pathway [GO:0045746]; neuron differentiation [GO:0030182]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; spermatogenesis [GO:0007283]	hit with GO BP
GN015885	Chromosome_3A	1281	1	44	40.59328649492584	0.8369565217391305	3.125	5	0	3.125	5	0	NA	NA	NA	0.5154639175257731	18	0	unmethylated (<10%)	Q93075	3'-5' RNA nuclease TATDN2 (EC 3.1.13.-) (TatD DNase domain containing 2)	NA	hit, no GO BP
GN016489	Chromosome_3A	1047	1	35	40.401146131805156	0.8199820989035579	0.4291845493562232	11	0	0.4291845493562232	11	0	NA	NA	NA	13.761467889908257	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015886	Chromosome_3A	462	1	16	44.15584415584416	0.7333333333333333	0.38461538461538464	16	0	0.38461538461538464	16	0	NA	NA	NA	0.7359705611775529	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016004	Chromosome_3A	5619	10	142	33.95621996796583	0.8773016995220404	0.46072838964458096	142	0	0.6627136379490757	46	0	0.3680588894223076	96	0	0.4175365344467641	42	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN016361	Chromosome_3A	168	1	8	45.833333333333336	0.9424964936886395	0.4807692307692308	8	0	0.4807692307692308	8	0	NA	NA	NA	0.4830917874396135	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020387	Chromosome_3A	246	1	14	54.47154471544715	0.7678929765886288	0	12	0	0	12	0	NA	NA	NA	3.1415460642428523	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015887	Chromosome_3A	12831	12	234	35.06351804224145	0.5958682921369186	81.3020991785823	234	0.9658119658119658	81.37697516930022	61	0.8852459016393442	81.28151423473741	173	0.9942196531791907	49.42928039702233	53	0.39622641509433965	methylated (>=50%)	Q05688	Insulin-like growth factor 1 receptor (EC 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) (CD antigen CD221) [Cleaved into: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain]	cellular response to glucose stimulus [GO:0071333]; insulin receptor signaling pathway [GO:0008286]; insulin-like growth factor receptor signaling pathway [GO:0048009]; negative regulation of apoptotic process [GO:0043066]; negative regulation of MAPK cascade [GO:0043409]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; protein autophosphorylation [GO:0046777]; regulation of JNK cascade [GO:0046328]	hit with GO BP
GN015888	Chromosome_3A	324	1	19	43.51851851851852	1.3933906745133544	1.4732965009208103	19	0	1.4732965009208103	19	0	NA	NA	NA	73.6976506639428	37	0.6216216216216216	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015889	Chromosome_3A	321	1	9	42.99065420560748	0.6100084459459459	96.7005076142132	9	1	96.7005076142132	9	1	NA	NA	NA	76.015625	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015890	Chromosome_3A	762	1	41	48.29396325459317	0.9250037009622502	0.3762227238525207	41	0	0.3762227238525207	41	0	NA	NA	NA	0.6748312921769558	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015891	Chromosome_3A	6033	6	203	40.924912978617606	0.8049604322221053	0.6503807106598984	159	0	0.6451612903225806	51	0	0.6516587677725119	108	0	0.6432459178624443	51	0	unmethylated (<10%)	Q867B0	Chymotrypsin-like elastase family member 1 (EC 3.4.21.36) (Elastase-1)	inflammatory response [GO:0006954]; proteolysis [GO:0006508]	hit with GO BP
GN015892	Chromosome_3A	47583	36	693	35.899375827501416	0.4587013055807078	87.24615880520038	675	0.9496296296296296	93.8518616668875	173	0.9653179190751445	85.56652403894748	502	0.9442231075697212	56.506110711718186	21	0.6666666666666666	methylated (>=50%)	Q7Z401	C-myc promoter-binding protein (DENN domain-containing protein 4A)	regulation of DNA-templated transcription [GO:0006355]; regulation of Rab protein signal transduction [GO:0032483]	hit with GO BP
GN015893	Chromosome_3A	5730	7	42	39.75567190226876	0.18721994025392083	67.97619047619048	42	0.8095238095238095	58.53018372703412	16	0.6875	70.74672825250192	26	0.8846153846153846	71.36774880255454	22	0.9545454545454546	methylated (>=50%)	Q92820	Gamma-glutamyl hydrolase (EC 3.4.19.9) (Conjugase) (GH) (Gamma-Glu-X carboxypeptidase)	NA	hit, no GO BP
GN015894	Chromosome_3A	303	1	10	42.57425742574257	0.7411937377690803	1.4124293785310735	10	0	1.4124293785310735	10	0	NA	NA	NA	1.075268817204301	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016483	Chromosome_3A	13115	19	374	37.82691574532978	0.7988032795001276	1.051498068030658	374	0	1.1827654181920586	200	0	0.9441565918249856	174	0	0.9081002542680712	60	0	unmethylated (<10%)	Q9UGM3	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Deleted in malignant brain tumors 1 protein) (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)	defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; epithelial cell differentiation [GO:0030855]; induction of bacterial agglutination [GO:0043152]; innate immune response [GO:0045087]	hit with GO BP
GN015896	Chromosome_3A	5272	5	163	37.46206373292868	0.8812563709715462	0.5594606225792569	155	0	0.6211180124223602	54	0	0.5330053300533005	101	0	0.46063651591289784	46	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN015897	Chromosome_3A	1550	2	23	37.806451612903224	0.41683718211049403	82.48366013071896	23	1	82.27334235453316	22	1	88.46153846153847	1	1	39.491916859122405	31	0.3548387096774194	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017719	Chromosome_3A	387	1	3	37.98449612403101	0.21515937731653076	80	3	1	80	3	1	NA	NA	NA	74.633431085044	18	0.9444444444444444	NA	NA	NA	NA	no Swiss-Prot hit
GN017720	Chromosome_3A	4963	5	39	34.83779971791255	0.2604828616415681	76.23703703703704	35	0.8285714285714286	73.00664451827242	16	0.8125	78.02855826807922	19	0.8421052631578947	39.31240657698057	58	0.3620689655172414	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016481	Chromosome_3A	474	1	9	40.71729957805907	0.5018823529411764	1.0309278350515463	5	0	1.0309278350515463	5	0	NA	NA	NA	0.7168458781362007	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015900	Chromosome_3A	465	1	8	40	0.4325581395348837	0.3968253968253968	8	0	0.3968253968253968	8	0	NA	NA	NA	6.902985074626866	50	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN016081	Chromosome_3A	342	2	2	34.21052631578947	0.20417910447761195	0	2	0	0	1	0	0	1	0	1.1417058428475486	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016479	Chromosome_3A	294	1	8	38.775510204081634	0.7703897805437275	0.8746355685131195	8	0	0.8746355685131195	8	0	NA	NA	NA	1.20870265914585	51	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN015902	Chromosome_3A	594	1	19	42.76094276094276	0.699906976744186	1.966568338249754	19	0	1.966568338249754	19	0	NA	NA	NA	0.8292499057670562	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016476	Chromosome_3A	27483	15	384	34.85063493796165	0.46085932161467613	85.8105074090705	367	0.9291553133514986	81.97076340010828	48	0.875	86.2002637942405	319	0.9373040752351097	26.321297749869178	47	0.2765957446808511	methylated (>=50%)	A7YWS7	DNA polymerase epsilon subunit 2 (DNA polymerase II subunit 2) (DNA polymerase epsilon subunit B)	DNA-templated DNA replication [GO:0006261]; error-prone translesion synthesis [GO:0042276]	hit with GO BP
GN015903	Chromosome_3A	414	1	0	34.54106280193237	0	NA	0	NA	NA	NA	NA	NA	NA	NA	90.39204859193815	49	0.9591836734693877	NA	NA	NA	NA	no Swiss-Prot hit
GN015904	Chromosome_3A	2149	3	52	37.50581665891112	0.6894407255452386	63.578154425612055	51	0.5686274509803921	70.67977067977068	20	0.65	57.53138075313807	31	0.5161290322580645	47.870311506675144	43	0.5813953488372093	methylated (>=50%)	A4QNC6	TIM double twin CX3C motif protein	NA	hit, no GO BP
GN015905	Chromosome_3A	40446	28	503	35.2222716708698	0.4009959055891877	83.40135530571385	466	0.9291845493562232	83.32426056976955	105	0.9238095238095239	83.42212013098089	361	0.9307479224376731	29.97624703087886	38	0.3157894736842105	methylated (>=50%)	Q14147	Probable ATP-dependent RNA helicase DHX34 (EC 3.6.4.13) (DEAH box protein 34) (DExH-box helicase 34)	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:2000623]; nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of phosphorylation [GO:0042327]	hit with GO BP
GN015906	Chromosome_3A	29211	11	318	34.100167745027555	0.3751177859036512	81.7333887426698	317	0.8958990536277602	71.415770609319	25	0.84	82.29394868798987	292	0.9006849315068494	46.37150466045273	41	0.5121951219512195	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016473	Chromosome_3A	2273	3	44	41.26704795424549	0.46444410389296775	90.86567164179104	43	0.9534883720930233	92.51760563380282	24	0.9583333333333334	87.38404452690168	19	0.9473684210526315	94.49458483754513	26	1	methylated (>=50%)	Q5ZJM3	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (PNGase) (EC 3.5.1.52) (N-glycanase 1) (Peptide:N-glycanase)	glycoprotein catabolic process [GO:0006516]; positive regulation of BMP signaling pathway [GO:0030513]	hit with GO BP
GN016472	Chromosome_3A	891	1	18	43.77104377104377	0.43842431863535714	95.36903039073806	18	1	95.36903039073806	18	1	NA	NA	NA	82.03316118510465	51	1	methylated (>=50%)	Q503I8	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (PNGase) (EC 3.5.1.52) (N-glycanase 1) (Peptide:N-glycanase)	glycoprotein catabolic process [GO:0006516]; peripheral nervous system neuron axonogenesis [GO:0048936]; positive regulation of BMP signaling pathway [GO:0030513]; regulation of protein catabolic process [GO:0042176]; regulation of protein folding [GO:1903332]; skeletal muscle tissue development [GO:0007519]; swimming behavior [GO:0036269]	hit with GO BP
GN015909	Chromosome_3A	17413	14	299	35.932923677712054	0.5335554052530718	80.74605646198633	290	0.9206896551724137	68.44631073785243	31	0.8387096774193549	82.31074481074481	259	0.9305019305019305	34.341906202723145	59	0.2711864406779661	methylated (>=50%)	Q8NEF3	Coiled-coil domain-containing protein 112 (Mutated in bladder cancer protein 1)	NA	hit, no GO BP
GN016504	Chromosome_3A	6248	8	128	33.80281690140845	0.7203369373718741	82.5181983621474	127	0.8188976377952756	68.00573888091822	14	0.5714285714285714	83.76775787523162	113	0.8495575221238938	0.7299270072992701	40	0	methylated (>=50%)	P48605	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma) (Chaperonin containing TCP1 subunit 3)	lumen formation, open tracheal system [GO:0035149]; protein folding [GO:0006457]; terminal branching, open tracheal system [GO:0007430]	hit with GO BP
GN016505	Chromosome_3A	2989	6	46	36.63432586149214	0.4623138895240145	91.06292966684293	46	0.9565217391304348	93.49422875131165	27	0.9629629629629629	88.59275053304904	19	0.9473684210526315	90.61111111111111	27	0.9259259259259259	methylated (>=50%)	P50143	T-complex protein 1 subunit gamma (TCP-1-gamma) (EC 3.6.1.-) (CCT-gamma)	protein folding [GO:0006457]	hit with GO BP
GN016506	Chromosome_3A	23691	21	283	37.57545059305222	0.3414156029541828	66.74339714078023	277	0.7581227436823105	61.49878640776699	47	0.723404255319149	68.05177111716621	230	0.7652173913043478	59.8932384341637	41	0.6585365853658537	methylated (>=50%)	Q63616	Vacuolar protein sorting-associated protein 33B (r-vps33b)	collagen fibril organization [GO:0030199]; collagen metabolic process [GO:0032963]; endosome organization [GO:0007032]; intracellular protein transport [GO:0006886]; lysosome localization [GO:0032418]; megakaryocyte development [GO:0035855]; melanosome localization [GO:0032400]; membrane fusion [GO:0061025]; peptidyl-lysine hydroxylation [GO:0017185]; platelet alpha granule organization [GO:0070889]; protein transport [GO:0015031]; regulation of platelet aggregation [GO:0090330]; skin morphogenesis [GO:0043589]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN015912	Chromosome_3A	1839	1	52	39.423599782490484	0.7399028194732444	22.613929492691316	52	0.038461538461538464	22.613929492691316	52	0.038461538461538464	NA	NA	NA	0.6132879045996593	33	0	sparse (10-50%)	Q9H8W5	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99)	negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN016508	Chromosome_3A	696	1	13	35.775862068965516	0.6184552289815448	1.0124610591900312	13	0	1.0124610591900312	13	0	NA	NA	NA	0.45440775522568916	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015915	Chromosome_3A	1910	1	56	39.26701570680628	0.7727430354872269	1.556970983722576	35	0	1.556970983722576	35	0	NA	NA	NA	0.32756200280767434	60	0	unmethylated (<10%)	Q13263	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (Nuclear corepressor KAP-1) (RING finger protein 96) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; epithelial to mesenchymal transition [GO:0001837]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN016509	Chromosome_3A	900	1	34	40.888888888888886	0.9070698088039129	0.831946755407654	33	0	0.831946755407654	33	0	NA	NA	NA	0.7861635220125787	48	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN016510	Chromosome_3A	1899	1	55	39.54713006845708	0.7538433778419343	0.6009013520280421	46	0	0.6009013520280421	46	0	NA	NA	NA	0.45586406962287607	56	0	unmethylated (<10%)	Q13263	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (Nuclear corepressor KAP-1) (RING finger protein 96) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; epithelial to mesenchymal transition [GO:0001837]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN016511	Chromosome_3A	402	1	23	46.766169154228855	1.046875	0.5235602094240838	23	0	0.5235602094240838	23	0	NA	NA	NA	0.7901234567901234	52	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015917	Chromosome_3A	1299	1	41	40.26173979984603	0.7788680900848202	0.8094645080946451	41	0	0.8094645080946451	41	0	NA	NA	NA	0.3281378178835111	51	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN016513	Chromosome_3A	43016	10	1249	36.6398549376976	0.8651423547427696	0.8225751171027077	1245	0	0.763831544178365	121	0	0.8276179842982969	1124	0	0.4171632896305125	67	0	unmethylated (<10%)	Q7KVW5	Small conductance calcium-activated potassium channel protein (Protein SK) (dSK)	potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of membrane potential in photoreceptor cell [GO:0016057]	hit with GO BP
GN015918	Chromosome_3A	44232	11	1361	36.5685476578043	0.9203848814693807	1.5392468058634936	1348	0	0.7244501940491591	91	0	1.5927789487998911	1257	0	0.5352960856473737	88	0	unmethylated (<10%)	P10533	Serine/threonine-protein kinase-transforming protein Rmil (EC 2.7.11.1)	NA	hit, no GO BP
GN015919	Chromosome_3A	525	2	4	43.42857142857143	0.17276840806252572	NA	0	NA	NA	NA	NA	NA	NA	NA	9.333333333333334	6	0	NA	Q3LSS0	Pre-mRNA splicing factor cwf19l2 (CWF19-like protein 2)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN016516	Chromosome_3A	4666	4	104	35.14787826832405	0.7218998994352904	1.171875	5	0	NA	NA	NA	1.171875	5	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016515	Chromosome_3A	5102	3	90	37.55390043120345	0.5101574868760936	77.66536964980544	87	0.7816091954022989	64.85655737704919	26	0.6153846153846154	82.00764154220215	61	0.8524590163934426	0.7932804479701353	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015920	Chromosome_3A	66133	52	1040	37.011779293242405	0.4625947185485616	91.62164408611088	1001	0.9790209790209791	95.65104166666667	154	1	91.03191996188662	847	0.9752066115702479	95.02982107355865	47	1	methylated (>=50%)	Q9TXQ1	Poly [ADP-ribose] polymerase tankyrase (EC 2.4.2.30) (Poly ADP-ribose metabolism enzyme 5) (Protein poly-ADP-ribosyltransferase tankyrase) (EC 2.4.2.-)	DNA damage response [GO:0006974]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; negative regulation of programmed cell death [GO:0043069]; response to gamma radiation [GO:0010332]	hit with GO BP
GN015921	Chromosome_3A	11548	18	152	35.460685833044685	0.4261372547210716	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q8BG79	Pre-mRNA splicing factor CWF19L2 (CWF19-like protein 2)	mRNA splicing, via spliceosome [GO:0000398]; single fertilization [GO:0007338]; spermatogenesis [GO:0007283]; spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN015922	Chromosome_3A	17958	10	541	37.13108363960352	0.8826201485103315	5.69702775338602	539	0.05009276437847866	6.543624161073826	53	0	5.6241149099737004	486	0.05555555555555555	47.14518760195759	34	0.23529411764705882	unmethylated (<10%)	P51871	Cytochrome P450 4F6 (EC 1.14.14.1) (CYPIVF6)	leukotriene metabolic process [GO:0006691]	hit with GO BP
GN016519	Chromosome_3A	1891	2	73	43.89212057112639	0.8016946494839973	0.6068779501011463	73	0	0.6220270764727406	68	0	0.4291845493562232	5	0	0.7644810349897089	32	0	unmethylated (<10%)	P17635	Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC 1.14.13.-) (EC 1.14.13.8) (Dimethylaniline oxidase 2) (FMO 1B1) (Pulmonary flavin-containing monooxygenase 2) (FMO 2)	NA	hit, no GO BP
GN016520	Chromosome_3A	1802	2	71	44.062153163152054	0.8136319698819698	0.7146047342563644	71	0	0.7503751875937968	67	0	0.4166666666666667	4	0	0.6918420294032862	56	0	unmethylated (<10%)	P17635	Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC 1.14.13.-) (EC 1.14.13.8) (Dimethylaniline oxidase 2) (FMO 1B1) (Pulmonary flavin-containing monooxygenase 2) (FMO 2)	NA	hit, no GO BP
GN015925	Chromosome_3A	645	1	19	42.63565891472868	0.6601486748545572	0.36363636363636365	18	0	0.36363636363636365	18	0	NA	NA	NA	25.617486338797814	47	0.2978723404255319	unmethylated (<10%)	P15208	Insulin receptor (IR) (EC 2.7.10.1) (CD antigen CD220) [Cleaved into: Insulin receptor subunit alpha; Insulin receptor subunit beta]	adrenal gland development [GO:0030325]; amyloid-beta clearance [GO:0097242]; animal organ morphogenesis [GO:0009887]; cellular response to growth factor stimulus [GO:0071363]; cellular response to insulin stimulus [GO:0032869]; dendritic spine maintenance [GO:0097062]; epidermis development [GO:0008544]; exocrine pancreas development [GO:0031017]; G protein-coupled receptor signaling pathway [GO:0007186]; glucose homeostasis [GO:0042593]; heart morphogenesis [GO:0003007]; insulin receptor signaling pathway [GO:0008286]; male gonad development [GO:0008584]; male sex determination [GO:0030238]; negative regulation of feeding behavior [GO:2000252]; negative regulation of gene expression [GO:0010629]; negative regulation of protein phosphorylation [GO:0001933]; negative regulation of transporter activity [GO:0032410]; neuron projection maintenance [GO:1990535]; peptidyl-tyrosine autophosphorylation [GO:0038083]; peptidyl-tyrosine phosphorylation [GO:0018108]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of developmental growth [GO:0048639]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of glycogen biosynthetic process [GO:0045725]; positive regulation of glycolytic process [GO:0045821]; positive regulation of glycoprotein biosynthetic process [GO:0010560]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of meiotic cell cycle [GO:0051446]; positive regulation of mitotic nuclear division [GO:0045840]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of phosphorylation [GO:0042327]; positive regulation of protein-containing complex disassembly [GO:0043243]; positive regulation of receptor internalization [GO:0002092]; positive regulation of respiratory burst [GO:0060267]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; receptor-mediated endocytosis [GO:0006898]; regulation of DNA-templated transcription [GO:0006355]; regulation of embryonic development [GO:0045995]; regulation of female gonad development [GO:2000194]; regulation of hydrogen peroxide metabolic process [GO:0010310]; response to nutrient levels [GO:0031667]; response to tumor necrosis factor [GO:0034612]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN015926	Chromosome_3A	342	1	7	42.10526315789474	0.46216216216216216	0	7	0	0	7	0	NA	NA	NA	0.5830903790087464	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016009	Chromosome_3A	987	1	22	39.51367781155015	0.5830670497569883	0.22935779816513763	16	0	0.22935779816513763	16	0	NA	NA	NA	0.13908205841446453	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016008	Chromosome_3A	408	1	14	44.85294117647059	0.7147147147147147	0.684931506849315	14	0	0.684931506849315	14	0	NA	NA	NA	0	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015929	Chromosome_3A	2855	11	76	36.042031523642734	0.8225794222458109	0.23346303501945526	76	0	0.31574199368516015	46	0	0.1221001221001221	30	0	0.5020538566864445	45	0	unmethylated (<10%)	Q9VUX2	E3 ubiquitin-protein ligase mind-bomb (EC 2.3.2.27) (Mind bomb homolog) (D-mib) (Protein mind bob 1) (RING-type E3 ubiquitin transferase mind-bomb)	endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; lateral inhibition [GO:0046331]; Notch signaling pathway [GO:0007219]; positive regulation of endocytosis [GO:0045807]; positive regulation of Notch signaling pathway [GO:0045747]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]; sensory organ development [GO:0007423]	hit with GO BP
GN016007	Chromosome_3A	1207	2	40	36.70256835128418	0.9994617645841096	0.8629441624365483	40	0	0.379746835443038	15	0	1.1864406779661016	25	0	0.5509641873278237	35	0	unmethylated (<10%)	Q4U2R1	E3 ubiquitin-protein ligase HERC2 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 2) (HECT-type E3 ubiquitin transferase HERC2)	DNA damage response [GO:0006974]; negative regulation of Notch signaling pathway [GO:0045746]; neuron differentiation [GO:0030182]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; spermatogenesis [GO:0007283]	hit with GO BP
GN016006	Chromosome_3A	636	1	20	42.924528301886795	0.6894308943089431	0.7421150278293135	20	0	0.7421150278293135	20	0	NA	NA	NA	0.4884856943475227	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016005	Chromosome_3A	519	1	19	41.811175337186896	0.8390912185159973	0.5484460694698354	19	0	0.5484460694698354	19	0	NA	NA	NA	0.7664793050587634	62	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN015931	Chromosome_3A	6976	15	179	34.50401376146789	0.8623015166016852	0.5234460196292258	179	0	0.4941757853865161	67	0	0.5365314817737099	112	0	0.6980802792321117	44	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN015932	Chromosome_3A	524	2	19	38.54961832061068	1.0011060834590246	0.6402048655569782	19	0	0.6980802792321117	15	0	0.4807692307692308	4	0	0.9247583018074821	47	0	unmethylated (<10%)	Q9BVR0	Putative HERC2-like protein 3	protein ubiquitination [GO:0016567]	hit with GO BP
GN015933	Chromosome_3A	5607	11	166	39.129659354378454	0.7799187034788576	0.7817109144542773	163	0	0.4997917534360683	48	0	0.9362868234756794	115	0	0.48525569242254574	34	0	unmethylated (<10%)	Q9VUX2	E3 ubiquitin-protein ligase mind-bomb (EC 2.3.2.27) (Mind bomb homolog) (D-mib) (Protein mind bob 1) (RING-type E3 ubiquitin transferase mind-bomb)	endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; lateral inhibition [GO:0046331]; Notch signaling pathway [GO:0007219]; positive regulation of endocytosis [GO:0045807]; positive regulation of Notch signaling pathway [GO:0045747]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]; sensory organ development [GO:0007423]	hit with GO BP
GN015934	Chromosome_3A	2047	6	17	35.46653639472399	0.26802892947093576	1.8018018018018018	16	0	2.1956087824351296	11	0	0.6060606060606061	5	0	0.7399186089530152	64	0	unmethylated (<10%)	O60290	Zinc finger protein 862	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN016003	Chromosome_3A	440	2	23	44.77272727272727	1.0476190476190477	1.5580736543909348	23	0	2.1235521235521237	17	0	0	6	0	1.6500711237553343	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016002	Chromosome_3A	234	1	9	52.99145299145299	0.5491525423728814	1.4234875444839858	9	0	1.4234875444839858	9	0	NA	NA	NA	1.5859030837004404	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016001	Chromosome_3A	11391	15	269	35.92309718198578	0.7337389574427531	0.813851432218942	269	0	0.8220979940808945	64	0	0.8112094395280236	205	0	1.3406940063091484	44	0	unmethylated (<10%)	O95714	E3 ubiquitin-protein ligase HERC2 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 2) (HECT-type E3 ubiquitin transferase HERC2)	DNA damage response [GO:0006974]; intracellular protein transport [GO:0006886]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]	hit with GO BP
GN016000	Chromosome_3A	3615	5	36	35.5463347164592	0.3152723202821801	90.80831408775981	36	1	91.2532637075718	14	1	90.56468906361687	22	1	91.125	13	1	methylated (>=50%)	Q8R1J3	Zinc finger CCHC domain-containing protein 9	NA	hit, no GO BP
GN015999	Chromosome_3A	527	2	1	48.38709677419355	0.03244274809160305	92	1	1	92	1	1	NA	NA	NA	86.39618138424821	18	1	NA	NA	NA	NA	no Swiss-Prot hit
GN015998	Chromosome_3A	11948	7	153	35.570806829594915	0.40605730512384003	89.49584613633778	143	0.972027972027972	94.49081803005008	26	1	88.70733957043089	117	0.9658119658119658	89.88074957410562	43	1	methylated (>=50%)	Q8AY68	SHC-transforming protein 1 (Src homology 2 domain-containing-transforming protein C1) (SH2 domain protein C1) (p60Shc)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; intracellular signal transduction [GO:0035556]	hit with GO BP
GN015937	Chromosome_3A	156	1	5	53.205128205128204	0.49808429118773945	83.75	5	1	83.75	5	1	NA	NA	NA	45.212765957446805	28	0.42857142857142855	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015938	Chromosome_3A	18948	24	250	37.75596369009922	0.37043397313544324	90.84143479718405	247	0.951417004048583	87.37240075614366	67	0.8805970149253731	91.58924205378973	180	0.9777777777777777	53.40433624952453	49	0.5102040816326531	methylated (>=50%)	F1RCY6	Regulator of nonsense transcripts 1 (EC 5.6.2.3) (EC 5.6.2.5) (ATP-dependent helicase RENT1) (Double-stranded nucleic acid 5'-3' helicase Upf1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog)	chordate embryonic development [GO:0043009]; nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:2000624]; regulation of gene expression [GO:0010468]; T cell differentiation in thymus [GO:0033077]	hit with GO BP
GN015939	Chromosome_3A	12631	12	173	34.23323568996912	0.46766663527719754	90.30153237765694	166	0.963855421686747	92.45508982035928	33	0.9696969696969697	89.87566607460036	133	0.9624060150375939	92.63015551048005	29	1	methylated (>=50%)	O17087	Poly(A) RNA polymerase gld-2 (EC 2.7.7.19) (Defective in germ line development protein 2)	cytosolic mRNA polyadenylation [GO:0180011]; embryo development ending in birth or egg hatching [GO:0009792]; mRNA 3'-end processing [GO:0031124]; mRNA processing [GO:0006397]; nucleus organization [GO:0006997]; positive regulation of meiosis I [GO:0060903]; positive regulation of mitotic nuclear division [GO:0045840]; regulation of cell division [GO:0051302]	hit with GO BP
GN015995	Chromosome_3A	41442	32	659	36.342357994305296	0.4827979822325787	89.25420635106359	656	0.9817073170731707	92.73593898951383	119	0.9747899159663865	88.76707212974819	537	0.9832402234636871	19.956345494231368	49	0.22448979591836735	methylated (>=50%)	P70399	TP53-binding protein 1 (53BP1) (p53-binding protein 1) (p53BP1)	DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; double-strand break repair via classical nonhomologous end joining [GO:0097680]; double-strand break repair via nonhomologous end joining [GO:0006303]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO:1902255]; positive regulation of isotype switching [GO:0045830]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein homooligomerization [GO:0051260]; protein localization to site of double-strand break [GO:1990166]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN015941	Chromosome_3A	18418	5	301	38.64154631338908	0.4380763769831035	91.42120765832107	222	0.990990990990991	94.14141414141415	21	1	91.20730738681493	201	0.9900497512437811	10.385656292286875	46	0.10869565217391304	methylated (>=50%)	Q9BMX5	Small ribosomal subunit protein eS6 (40S ribosomal protein S6)	translation [GO:0006412]	hit with GO BP
GN015942	Chromosome_3A	537	1	6	41.71322160148976	0.257183908045977	0	6	0	0	6	0	NA	NA	NA	0.6725514922236234	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015991	Chromosome_3A	291	1	2	41.92439862542955	0.16270617836175566	0	2	0	0	2	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015943	Chromosome_3A	291	1	2	42.2680412371134	0.16050744622173194	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015992	Chromosome_3A	7490	2	168	39.973297730307074	0.5655675811729172	1.261692408092234	113	0	0.7407407407407407	11	0	1.3310327828444664	102	0	0	9	0	unmethylated (<10%)	B7ZFT1	Glutaredoxin-1 (Glutathione-dependent oxidoreductase 1)	cellular response to oxidative stress [GO:0034599]	hit with GO BP
GN015944	Chromosome_3A	802	3	25	37.53117206982544	0.9054371387283237	1.3201320132013201	25	0	1.3245033112582782	9	0	1.3175230566534915	16	0	0.5448241703813769	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015993	Chromosome_3A	198	1	10	46.96969696969697	0.9287054409005628	0.4830917874396135	10	0	0.4830917874396135	10	0	NA	NA	NA	0.5583992554676593	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015945	Chromosome_3A	1182	1	36	46.7005076142132	0.5590708429682573	0.6944444444444444	35	0	0.6944444444444444	35	0	NA	NA	NA	1.4037433155080214	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015946	Chromosome_3A	20422	10	367	33.1994907452747	0.670271317333776	1.5839610101905184	360	0.005555555555555556	0.5415737496017841	66	0	1.8033116578400483	294	0.006802721088435374	1.0766045548654244	61	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN015976	Chromosome_3A	2355	1	83	39.91507430997877	0.89007941567548865	0.6525792417650714	83	0	0.6525792417650714	83	0	NA	NA	NA	0.3210845522654299	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015977	Chromosome_3A	1545	2	44	41.42394822006472	0.708125	88.87525562372188	44	0.9772727272727273	92.24283305227657	10	1	87.79697624190065	34	0.9705882352941176	92.01764941837143	37	1	methylated (>=50%)	P24367	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)	negative regulation of collagen fibril organization [GO:1904027]; protein folding [GO:0006457]	hit with GO BP
GN015978	Chromosome_3A	4076	6	32	33.46418056918547	0.2997093257045692	87.34330772341286	32	0.96875	91.0216718266254	23	1	80.41958041958041	9	0.8888888888888888	41.14987080103359	31	0.3870967741935484	methylated (>=50%)	Q9BWL3	Lipid transport auxiliary protein 1 (Hepatitis C virus NS5A-transactivated protein 4) (HCV NS5A-transactivated protein 4) (Protein NICE-3) (S863-3) (Spigot ortholog)	phagocytosis [GO:0006909]	hit with GO BP
GN015979	Chromosome_3A	2550	3	59	37.84313725490196	0.6480556177742552	59.08	59	0.6101694915254238	37.25305738476011	28	0.35714285714285715	75.22616562282533	31	0.8387096774193549	0.639386189258312	37	0	methylated (>=50%)	Q9Y2Y9	Krueppel-like factor 13 (Basic transcription element-binding protein 3) (BTE-binding protein 3) (Novel Sp1-like zinc finger transcription factor 1) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor BTEB3) (Transcription factor NSLP1)	negative regulation of cell population proliferation [GO:0008285]; negative regulation of erythrocyte differentiation [GO:0045647]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN015950	Chromosome_3A	7416	4	130	34.84358144552319	0.5797153737500924	70.76139258420606	130	0.823076923076923	94.60043196544277	9	1	69.672454617206	121	0.8099173553719008	3.183023872679045	50	0	methylated (>=50%)	P86229	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 (Oligosaccharyl transferase subunit KCP2) (Keratinocyte-associated protein 2) (KCP-2)	protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN015951	Chromosome_3A	20306	7	572	34.2805082241702	0.9594688117736371	1.4129324186250183	566	0	0.6632975363234365	69	0	1.4892727331210396	497	0	0.30143180105501133	59	0	unmethylated (<10%)	Q5R5L7	Arrestin domain-containing protein 3	protein transport [GO:0015031]	hit with GO BP
GN015981	Chromosome_3A	327	1	10	42.50764525993884	0.6772990886495444	0.7125890736342043	10	0	0.7125890736342043	10	0	NA	NA	NA	0.4103967168262654	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015982	Chromosome_3A	1176	1	45	41.326530612244895	0.8967515632148848	0.729483282674772	45	0	0.729483282674772	45	0	NA	NA	NA	0.9345794392523364	52	0	unmethylated (<10%)	Q27218	Acetylcholine receptor subunit beta-type lev-1 (Levamisole-resistant protein 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of egg-laying behavior [GO:0046662]; regulation of locomotion [GO:0040012]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]; transmembrane transport [GO:0055085]	hit with GO BP
GN015983	Chromosome_3A	465	1	14	46.666666666666664	0.9570714495736548	0.2680965147453083	14	0	0.2680965147453083	14	0	NA	NA	NA	0.13175230566534915	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015984	Chromosome_3A	450	1	0	40.666666666666664	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.35842293906810035	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015985	Chromosome_3A	1152	1	35	46.52777777777778	0.5614035087719298	0.16863406408094436	31	0	0.16863406408094436	31	0	NA	NA	NA	0.5973715651135006	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015986	Chromosome_3A	768	1	44	42.578125	1.268373245251858	1.1560693641618498	44	0	1.1560693641618498	44	0	NA	NA	NA	0.6391478029294274	107	0	unmethylated (<10%)	Q10981	Galactoside alpha-(1,2)-fucosyltransferase 2 (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (SE2) (Secretor blood group alpha-2-fucosyltransferase) (Secretor factor) (Se) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.344)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; L-fucose catabolic process [GO:0042355]; oligosaccharide biosynthetic process [GO:0009312]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN015987	Chromosome_3A	954	1	48	49.37106918238994	0.8292647591452372	1.2972972972972974	47	0	1.2972972972972974	47	0	NA	NA	NA	0.8638562543192813	52	0	unmethylated (<10%)	O49326	Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP2 (EC 4.8.1.5) (Jacalin-related lectin 21) (Nitrile-specifier protein 2) (AtNSP2)	embryo development ending in seed dormancy [GO:0009793]; glucosinolate catabolic process [GO:0019762]; nitrile biosynthetic process [GO:0080028]; seed dormancy process [GO:0010162]; seed germination [GO:0009845]	hit with GO BP
GN015988	Chromosome_3A	12710	9	213	36.49095200629426	0.5042762983266416	86.52004630116805	182	0.989010989010989	91.05406456631661	66	1	84.83843046739757	116	0.9827586206896551	56.375838926174495	4	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015989	Chromosome_3A	9331	15	129	38.46318722537777	0.37452791148476466	92.41736876215165	117	1	92.2920892494929	45	1	92.47619047619048	72	1	92.08163265306122	22	1	methylated (>=50%)	P97852	Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MFP-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)]	androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid biosynthetic process [GO:0006633]; medium-chain fatty-acyl-CoA metabolic process [GO:0036112]; response to steroid hormone [GO:0048545]; response to xenobiotic stimulus [GO:0009410]; Sertoli cell development [GO:0060009]; very long-chain fatty acid metabolic process [GO:0000038]; very long-chain fatty-acyl-CoA metabolic process [GO:0036111]	hit with GO BP
GN015960	Chromosome_3A	340	2	7	42.05882352941177	0.4722222222222222	90.96989966555184	7	1	95.3307392996109	6	1	64.28571428571429	1	1	83.63970588235294	33	0.7272727272727273	methylated (>=50%)	P62248	Myeloid-derived growth factor (MYDGF)	negative regulation of apoptotic process [GO:0043066]; positive regulation of angiogenesis [GO:0045766]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN015961	Chromosome_3A	4460	4	83	37.53363228699551	0.5287983543797498	87.20555417803124	83	0.8554216867469879	79.47434292866083	51	0.7647058823529411	92.27926078028747	32	1	2.487562189054726	27	0	methylated (>=50%)	Q7ZWG6	Proton-coupled folate transporter (Solute carrier family 46 member 1)	transmembrane transport [GO:0055085]	hit with GO BP
GN015962	Chromosome_3A	7493	4	241	36.68757507006539	0.9564039090570131	21.553417124901806	237	0.1940928270042194	47.70704996577687	32	0.5	17.17299094348275	205	0.14634146341463414	0.6925945657964837	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015963	Chromosome_3A	5266	3	101	37.333839726547666	0.5547667723631509	87.2407139411481	101	0.9801980198019802	92.28855721393035	21	1	86.0263315380012	80	0.975	74.2127659574468	23	0.9130434782608695	methylated (>=50%)	B5X3B2	Adipocyte plasma membrane-associated protein	NA	hit, no GO BP
GN015964	Chromosome_3A	2276	2	41	34.18277680140598	0.6177208486413134	83.72199359853681	41	1	91.94915254237289	8	1	82.72680676576115	33	1	78.35820895522389	3	0.6666666666666666	methylated (>=50%)	P11960	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDE1A) (BCKDH E1-alpha)	branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA [GO:0120552]; branched-chain amino acid catabolic process [GO:0009083]; response to cAMP [GO:0051591]; response to glucocorticoid [GO:0051384]; response to nutrient [GO:0007584]	hit with GO BP
GN015965	Chromosome_3A	8019	5	78	36.13916947250281	0.3201563001458276	89.54447632711621	78	1	92.53731343283582	9	1	89.26962991971803	69	1	90.27777777777777	39	1	methylated (>=50%)	Q5PQ09	Deubiquitinase DESI2 (EC 3.4.19.12) (Desumoylating isopeptidase 2) (DeSI-2) (PPPDE peptidase domain-containing protein 1) (Palmitoyl protein thioesterase DESI2) (EC 3.1.2.22) (Protein FAM152A) (S-depalmitoylase DESI2)	protein deubiquitination [GO:0016579]	hit with GO BP
GN015966	Chromosome_3A	3494	4	57	37.693188322839156	0.46159087748574607	88.1570408825438	57	1	89.23327895595432	26	1	87.44612068965517	31	1	91.79120641108945	75	1	methylated (>=50%)	Q09363	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8 (EC 2.4.1.135) (Glucuronyl transferase I) (GlcAT-I) (Squashed vulva protein 8) (Vulval invagination protein sqv-8)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; egg-laying behavior [GO:0018991]; embryo development ending in birth or egg hatching [GO:0009792]; morphogenesis of an epithelium [GO:0002009]; nematode pharynx development [GO:0160094]; spermatid development [GO:0007286]; vulval development [GO:0040025]	hit with GO BP
GN015967	Chromosome_3A	32329	17	402	37.965912957406665	0.3541175346061548	86.75955015252926	402	0.9477611940298507	83.14500941619586	79	0.8607594936708861	87.37284976300793	323	0.9690402476780186	0.8487654320987654	62	0	methylated (>=50%)	Q5M868	Non-lysosomal glucosylceramidase (NLGase) (EC 3.2.1.45) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2) (Bile acid beta-glucosidase GBA2) (Bile acid glucosyl transferase GBA2) (Cholesterol glucosyltransferase GBA2) (EC 2.4.1.-) (Cholesteryl-beta-glucosidase GBA2) (EC 3.2.1.-) (Glucosylceramidase 2) (Non-lysosomal cholesterol glycosyltransferase) (Non-lysosomal galactosylceramidase) (EC 3.2.1.46) (Non-lysosomal glycosylceramidase)	bile acid metabolic process [GO:0008206]; carbohydrate metabolic process [GO:0005975]; central nervous system development [GO:0007417]; central nervous system neuron development [GO:0021954]; cholesterol metabolic process [GO:0008203]; glucosylceramide catabolic process [GO:0006680]; glycolipid biosynthetic process [GO:0009247]; glycoside catabolic process [GO:0016139]; regulation of actin filament polymerization [GO:0030833]; regulation of membrane lipid distribution [GO:0097035]; regulation of microtubule polymerization [GO:0031113]	hit with GO BP
GN015968	Chromosome_3A	969	1	30	42.10526315789474	0.7250280583613917	0.6451612903225806	30	0	0.6451612903225806	30	0	NA	NA	NA	0.625	46	0	unmethylated (<10%)	P59889	Zinc transporter ZIP1 (DrZIP1) (Solute carrier family 39 member 1) (Zrt- and Irt-like protein 1) (ZIP-1)	zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN019926	Chromosome_3A	163	1	27	70.5521472392638	1.3320217917675545	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7272727272727273	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019922	Chromosome_3A	150	1	24	69.33333333333333	1.3318534961154274	0.5882352941176471	25	0	0.5882352941176471	25	0	NA	NA	NA	0.8447729672650475	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016035	Chromosome_3A	1947	1	76	41.80790960451977	0.894344617504669	0.6395614435815441	76	0	0.6395614435815441	76	0	NA	NA	NA	0.5081021697335897	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016034	Chromosome_3A	1809	1	70	42.564953012714206	0.8550072921730676	0.7619439868204283	70	0	0.7619439868204283	70	0	NA	NA	NA	0.5864283719631388	46	0	unmethylated (<10%)	Q6R7G0	Putative transmembrane protein ORF68	NA	hit, no GO BP
GN016033	Chromosome_3A	2002	3	86	41.60839160839161	0.9928264981316602	0.9758167161646161	86	0	0.6272401433691757	83	0	7.2	3	0	1.4332411365350768	45	0	unmethylated (<10%)	Q6R7G0	Putative transmembrane protein ORF68	NA	hit, no GO BP
GN016032	Chromosome_3A	709	2	21	38.081805359661494	0.841376582278481	1.1004784688995215	21	0	1.154068090017311	18	0	0.8403361344537815	3	0	9.26007975188303	36	0.05555555555555555	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016031	Chromosome_3A	459	1	23	47.930283224400874	0.8783592644978784	0.6583760058522312	23	0	0.6583760058522312	23	0	NA	NA	NA	1.1406844106463878	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016030	Chromosome_3A	3179	3	104	44.7625039320541	0.6617746552172782	0.6731946144430845	104	0	0.6682474671265359	100	0	0.7604562737642585	4	0	1.0734732824427482	50	0	unmethylated (<10%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016029	Chromosome_3A	1053	1	60	46.72364672364672	1.054054054054054	0.778485491861288	60	0	0.778485491861288	60	0	NA	NA	NA	0.7349938750510412	41	0	unmethylated (<10%)	P59889	Zinc transporter ZIP1 (DrZIP1) (Solute carrier family 39 member 1) (Zrt- and Irt-like protein 1) (ZIP-1)	zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN016028	Chromosome_3A	2357	3	33	35.46881629189648	0.44830805941244617	89.47368421052632	33	0.9696969696969697	92.9113924050633	7	1	88.67256637168141	26	0.9615384615384616	52.85299806576403	37	0.4594594594594595	methylated (>=50%)	Q86WQ0	Nuclear receptor 2C2-associated protein (TR4 orphan receptor-associated 16 kDa protein)	NA	hit, no GO BP
GN016027	Chromosome_3A	1251	1	29	42.84572342126299	0.5099089222465846	84.26610348468849	29	0.8275862068965517	84.26610348468849	29	0.8275862068965517	NA	NA	NA	36.015006252605254	53	0.24528301886792453	methylated (>=50%)	Q2XWK0	Synaptic vesicle 2-related protein (SV2-related protein)	NA	hit, no GO BP
GN016026	Chromosome_3A	12347	10	198	35.23123025836235	0.5228870257090302	1.8006593963986812	193	0	2.5947067981318113	62	0	1.54388320187951	131	0	0.30133448127421436	39	0	unmethylated (<10%)	Q708S7	Acid-sensing ion channel 1A (ASIC1-A) (Acid-sensing ion channel 1.2-A) (Amiloride-sensitive cation channel 2-B, neuronal-A) (ZASIC1.2)	cellular response to pH [GO:0071467]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN016025	Chromosome_3A	2076	1	86	43.641618497109825	0.870088160902175	1.0557184750733137	78	0	1.0557184750733137	78	0	NA	NA	NA	0.6335797254487856	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016024	Chromosome_3A	717	1	34	45.32775453277545	0.9232692016361157	1.9823788546255507	32	0	1.9823788546255507	32	0	NA	NA	NA	1.502419149477973	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016023	Chromosome_3A	19035	10	270	35.23509324927765	0.45751891740508094	87.97977178423237	268	0.9552238805970149	90.50602409638554	45	0.9555555555555556	87.58708517491947	223	0.9551569506726457	47.810545129579985	56	0.5892857142857143	methylated (>=50%)	Q5U2U0	ATP-dependent clpX-like chaperone, mitochondrial (EC 3.6.4.10) (ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial) (Caseinolytic mitochondrial matrix peptidase chaperone subunit X)	ATP metabolic process [GO:0046034]; protein catabolic process [GO:0030163]; proteolysis [GO:0006508]	hit with GO BP
GN016022	Chromosome_3A	17954	12	346	35.14537150495711	0.6308544163680337	86.65476133018002	333	0.9009009009009009	81.29230769230769	26	0.8846153846153846	87.11113438776579	307	0.9022801302931596	5.654761904761905	37	0	methylated (>=50%)	Q9Y6V7	Probable ATP-dependent RNA helicase DDX49 (EC 3.6.4.13) (DEAD box protein 49)	positive regulation of cell growth [GO:0030307]; regulation of rRNA stability [GO:0044357]	hit with GO BP
GN016021	Chromosome_3A	3331	3	100	40.048033623536476	0.7490560903814542	1.3616432033233326	100	0	1.7311608961303462	74	0	0.5767844268204758	26	0	1.9658561821003622	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016020	Chromosome_3A	336	1	3	42.26190476190476	0.20253164556962025	72.46376811594203	3	1	72.46376811594203	3	1	NA	NA	NA	52.47933884297521	10	0.7	NA	NA	NA	NA	no Swiss-Prot hit
GN016019	Chromosome_3A	1812	2	10	40.06622516556291	0.1376899696048632	52.47933884297521	10	0.7	52.47933884297521	10	0.7	NA	NA	NA	70.55288461538461	16	0.8125	methylated (>=50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016043	Chromosome_3A	909	1	37	45.1045104510451	0.8166520979020979	0.1466275659824047	33	0	0.1466275659824047	33	0	NA	NA	NA	0.5005005005005005	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016042	Chromosome_3A	213	1	12	54.460093896713616	0.7654986522911051	0.37105751391465674	12	0	0.37105751391465674	12	0	NA	NA	NA	1.339497392128971	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016039	Chromosome_3A	1193	2	48	40.98910310142498	0.9593566761601608	0.8154943934760448	48	0	0.8791208791208791	44	0	0	4	0	0.6734006734006734	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016038	Chromosome_3A	3832	9	130	39.06576200417537	0.8948253315897627	0.49387232485824034	130	0	0.29533372711163614	54	0	0.5829358770535241	76	0	0.7931665649786455	45	0	unmethylated (<10%)	Q62148	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (ALDH1A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))	9-cis-retinoic acid biosynthetic process [GO:0042904]; aldehyde metabolic process [GO:0006081]; anterior/posterior pattern specification [GO:0009952]; blood vessel development [GO:0001568]; camera-type eye development [GO:0043010]; cardiac muscle tissue development [GO:0048738]; cellular response to retinoic acid [GO:0071300]; determination of bilateral symmetry [GO:0009855]; embryonic camera-type eye development [GO:0031076]; embryonic digestive tract development [GO:0048566]; embryonic forelimb morphogenesis [GO:0035115]; embryonic limb morphogenesis [GO:0030326]; face development [GO:0060324]; forebrain development [GO:0030900]; heart development [GO:0007507]; heart looping [GO:0001947]; heart morphogenesis [GO:0003007]; hindbrain development [GO:0030902]; kidney development [GO:0001822]; liver development [GO:0001889]; lung development [GO:0030324]; midgut development [GO:0007494]; morphogenesis of embryonic epithelium [GO:0016331]; negative regulation of cell population proliferation [GO:0008285]; neural crest cell development [GO:0014032]; neural tube development [GO:0021915]; neuron differentiation [GO:0030182]; pancreas development [GO:0031016]; pituitary gland development [GO:0021983]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of gene expression [GO:0010628]; protein homotetramerization [GO:0051289]; proximal/distal pattern formation [GO:0009954]; regulation of endothelial cell proliferation [GO:0001936]; response to cytokine [GO:0034097]; response to estradiol [GO:0032355]; response to retinoic acid [GO:0032526]; response to vitamin A [GO:0033189]; retinal metabolic process [GO:0042574]; retinoic acid biosynthetic process [GO:0002138]; retinoic acid metabolic process [GO:0042573]; retinoic acid receptor signaling pathway [GO:0048384]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; ureter maturation [GO:0035799]	hit with GO BP
GN016037	Chromosome_3A	2840	8	85	38.063380281690144	0.8269955464200068	0.4737839545167404	72	0	0.4282655246252677	37	0	0.509915014164306	35	0	0.39113428943937417	48	0	unmethylated (<10%)	Q63639	Retinal dehydrogenase 2 (RALDH 2) (RalDH2) (EC 1.2.1.36) (Aldehyde dehydrogenase family 1 member A2) (ALDH1A2) (Retinaldehyde-specific dehydrogenase type 2) (RALDH(II))	9-cis-retinoic acid biosynthetic process [GO:0042904]; aldehyde metabolic process [GO:0006081]; anterior/posterior pattern specification [GO:0009952]; blood vessel development [GO:0001568]; camera-type eye development [GO:0043010]; cardiac muscle tissue development [GO:0048738]; cellular response to retinoic acid [GO:0071300]; determination of bilateral symmetry [GO:0009855]; embryonic camera-type eye development [GO:0031076]; embryonic digestive tract development [GO:0048566]; embryonic forelimb morphogenesis [GO:0035115]; embryonic limb morphogenesis [GO:0030326]; face development [GO:0060324]; forebrain development [GO:0030900]; heart morphogenesis [GO:0003007]; hindbrain development [GO:0030902]; kidney development [GO:0001822]; liver development [GO:0001889]; lung development [GO:0030324]; midgut development [GO:0007494]; morphogenesis of embryonic epithelium [GO:0016331]; negative regulation of cell population proliferation [GO:0008285]; neural crest cell development [GO:0014032]; neural tube development [GO:0021915]; neuron differentiation [GO:0030182]; pancreas development [GO:0031016]; pituitary gland development [GO:0021983]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of gene expression [GO:0010628]; protein homotetramerization [GO:0051289]; proximal/distal pattern formation [GO:0009954]; regulation of endothelial cell proliferation [GO:0001936]; response to cytokine [GO:0034097]; response to estradiol [GO:0032355]; response to retinoic acid [GO:0032526]; response to vitamin A [GO:0033189]; retinal metabolic process [GO:0042574]; retinoic acid biosynthetic process [GO:0002138]; retinoic acid metabolic process [GO:0042573]; retinoic acid receptor signaling pathway [GO:0048384]; retinol metabolic process [GO:0042572]; ureter maturation [GO:0035799]	hit with GO BP
GN016628	Chromosome_3A	633	3	15	45.18167456556082	0.4718012422360248	0	2	0	0	1	0	0	1	0	0.8172043010752689	50	0	NA	P10394	Retrovirus-related Pol polyprotein from transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]	DNA integration [GO:0015074]; DNA repair [GO:0006281]; proteolysis [GO:0006508]	hit with GO BP
GN016629	Chromosome_3A	822	1	5	40.99756690997567	0.1451271186440678	0.8333333333333334	5	0	0.8333333333333334	5	0	NA	NA	NA	1.514004542013626	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016630	Chromosome_3A	2007	1	15	41.205779770802195	0.17646334744024103	1.8918918918918919	14	0	1.8918918918918919	14	0	NA	NA	NA	0.4160887656033287	12	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016631	Chromosome_3A	3286	2	25	39.07486305538649	0.19969371384121737	2.5179856115107913	25	0	3.730017761989343	19	0	0	6	0	1.053864168618267	12	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016632	Chromosome_3A	1989	1	13	41.12619406737054	0.15464712918660287	4.566210045662101	13	0	4.566210045662101	13	0	NA	NA	NA	1.8147086914995225	31	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016046	Chromosome_3A	1185	1	48	41.0126582278481	0.9645909645909646	0.5691519635742743	48	0	0.5691519635742743	48	0	NA	NA	NA	0.4945249028611798	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002424	Chromosome_3A	851	3	18	34.90011750881316	0.6981132075471698	3.083989501312336	18	0	4.299065420560748	14	0	0.22026431718061673	4	0	1.6578749058025621	60	0	unmethylated (<10%)	Q8BJ25	THAP domain-containing protein 3	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN016045	Chromosome_3A	1236	1	60	40.614886731391586	1.1772923545847092	0.3481624758220503	60	0	0.3481624758220503	60	0	NA	NA	NA	0.4700720777185835	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016044	Chromosome_3A	5811	6	169	37.27413526071244	0.8379421649861901	0.629009938357026	169	0	0.47152702212549874	82	0	0.7126348228043143	87	0	0.7332971211298207	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016558	Chromosome_3A	5320	3	139	35.84586466165413	0.8142528381250207	0.5741626794258373	136	0	0.5308745459625593	91	0	0.6682867557715675	45	0	0.7964161274265804	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016557	Chromosome_3A	492	1	17	47.96747967479675	0.6017699115044248	0.8356545961002786	17	0	0.8356545961002786	17	0	NA	NA	NA	0.502092050209205	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016556	Chromosome_3A	1089	1	50	46.5564738292011	0.8581560283687943	0.9615384615384616	50	0	0.9615384615384616	50	0	NA	NA	NA	0.47672462142456534	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016555	Chromosome_3A	414	1	15	43.23671497584541	0.7764441110277569	0.3913894324853229	14	0	0.3913894324853229	14	0	NA	NA	NA	0.8050847457627118	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016554	Chromosome_3A	273	1	9	50.54945054945055	0.5214346349745331	0.7352941176470589	9	0	0.7352941176470589	9	0	NA	NA	NA	0.4712939160239931	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016553	Chromosome_3A	306	1	15	49.01960784313726	0.8784688995215311	1.1627906976744187	14	0	1.1627906976744187	14	0	NA	NA	NA	0.880410858400587	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016552	Chromosome_3A	21217	17	334	34.19899137484093	0.5392500121182292	81.87418331155497	332	0.9518072289156626	79.096937164509	57	0.9122807017543859	82.35584031542632	275	0.96	0.7274616783580151	59	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016551	Chromosome_3A	249	1	8	42.570281124497996	0.718355571583123	90.625	8	1	90.625	8	1	NA	NA	NA	83.60488798370672	25	0.96	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016566	Chromosome_3A	1233	1	44	39.65936739659367	0.9102990033222591	0.7218212104386452	44	0	0.7218212104386452	44	0	NA	NA	NA	0.7026419336706015	59	0	unmethylated (<10%)	P29275	Adenosine receptor A2b	activation of adenylate cyclase activity [GO:0007190]; adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; G protein-coupled receptor signaling pathway [GO:0007186]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; vasodilation [GO:0042311]	hit with GO BP
GN016567	Chromosome_3A	330	1	8	42.72727272727273	0.5409836065573771	11.71875	8	0	11.71875	8	0	NA	NA	NA	1.1896893588896233	31	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016568	Chromosome_3A	1731	4	47	36.97284806470248	0.7946959706959706	0.5733397037744864	47	0	0.3412969283276451	24	0	0.7413509060955519	23	0	1.2044270833333333	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016569	Chromosome_3A	45882	14	753	35.38860555337605	0.5289009976957411	86.9654605263158	745	0.9852348993288591	93.55383057711778	46	1	86.53808262363991	699	0.9842632331902719	83.17432784041631	22	1	methylated (>=50%)	O54829	Regulator of G protein signaling 7 (RGS7)	G protein-coupled receptor signaling pathway [GO:0007186]; intracellular signal transduction [GO:0035556]; negative regulation of G protein-coupled receptor signaling pathway [GO:0045744]; positive regulation of GTPase activity [GO:0043547]; positive regulation of potassium ion transmembrane transport [GO:1901381]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; regulation of postsynaptic membrane potential [GO:0060078]	hit with GO BP
GN016570	Chromosome_3A	11411	8	176	34.265182718429585	0.5255876214465635	81.54540626659586	176	0.8977272727272727	87.54997144488864	40	0.925	80.44411857127893	136	0.8897058823529411	13.665389527458492	52	0.11538461538461539	methylated (>=50%)	Q1RM35	Cilia- and flagella-associated protein 36 (Coiled-coil domain-containing protein 104)	NA	hit, no GO BP
GN016571	Chromosome_3A	961	2	16	35.37981269510926	0.5356744704570792	90.85850556438791	16	0.9375	90.65217391304348	7	1	90.97744360902256	9	0.8888888888888888	93.62780593772628	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016572	Chromosome_3A	1208	2	16	36.09271523178808	0.4116895288404192	91.94805194805195	16	1	91.94805194805195	16	1	NA	NA	NA	74.67948717948718	24	0.9583333333333334	methylated (>=50%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN016573	Chromosome_3A	32170	15	525	37.10289089213553	0.47484151776884415	74.26747163131776	524	0.8816793893129771	88.98591549295774	78	1	72.40716345640332	446	0.8609865470852018	89.75069252077563	26	0.9615384615384616	methylated (>=50%)	Q75J93	Circularly permutated Ras protein 1 (DdiCPRas1)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN016574	Chromosome_3A	2004	1	16	41.31736526946108	0.1872077069041016	67.50972762645914	15	0.7333333333333333	67.50972762645914	15	0.7333333333333333	NA	NA	NA	82.87179487179488	16	0.875	methylated (>=50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016575	Chromosome_3A	300	1	17	61	0.6091734352603918	63.63636363636363	2	1	63.63636363636363	2	1	NA	NA	NA	41.75506268081003	56	0.25	NA	NA	NA	NA	no Swiss-Prot hit
GN016576	Chromosome_3A	1598	2	68	50.187734668335416	0.7742248062015504	1.1029411764705883	68	0	1.1010362694300517	67	0	1.1363636363636365	1	0	0.6871825515386913	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016577	Chromosome_3A	288	1	11	44.44444444444444	0.8481927710843373	0.7407407407407407	11	0	0.7407407407407407	11	0	NA	NA	NA	0.8333333333333334	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016578	Chromosome_3A	348	1	13	44.827586206896555	0.7683423913043478	0.8620689655172413	13	0	0.8620689655172413	13	0	NA	NA	NA	25.9561826958782	51	0.2549019607843137	unmethylated (<10%)	A6QQ14	DNA polymerase epsilon subunit 4 (DNA polymerase II subunit 4)	DNA-templated DNA replication [GO:0006261]	hit with GO BP
GN016579	Chromosome_3A	13216	6	236	36.160714285714285	0.5484629379340566	88.80597014925372	224	0.9553571428571429	94.51604751074046	77	1	86.44669520726741	147	0.9319727891156463	89.35784567581564	43	1	methylated (>=50%)	P58283	E3 ubiquitin-protein ligase RNF216 (EC 2.3.2.27) (RING finger protein 216) (RING-type E3 ubiquitin transferase RNF216) (Triad domain-containing protein 3) (UbcM4-interacting protein 83) (Ubiquitin-conjugating enzyme 7-interacting protein 1)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein catabolic process, modulating synaptic transmission [GO:0099546]; protein K48-linked ubiquitination [GO:0070936]; regulation of defense response to virus by host [GO:0050691]; regulation of interferon-beta production [GO:0032648]; regulation of postsynaptic neurotransmitter receptor internalization [GO:0099149]	hit with GO BP
GN016580	Chromosome_3A	15630	10	249	36.83941138835573	0.4704436787458607	86.48306734137797	161	0.9627329192546584	90.36918138041733	14	1	86.23225940122242	147	0.9591836734693877	74.64788732394366	3	0.6666666666666666	methylated (>=50%)	Q08C93	Lysophosphatidylserine lipase ABHD12 (EC 3.1.1.-) (2-arachidonoylglycerol hydrolase ABHD12) (Abhydrolase domain-containing protein 12) (Monoacylglycerol lipase ABHD12) (EC 3.1.1.23) (Oxidized phosphatidylserine lipase ABHD12) (EC 3.1.-.-)	acylglycerol catabolic process [GO:0046464]; anterior lateral line development [GO:0048899]; camera-type eye development [GO:0043010]; monoacylglycerol catabolic process [GO:0052651]; myelination [GO:0042552]; phosphatidylserine catabolic process [GO:0006660]; phospholipid catabolic process [GO:0009395]; posterior lateral line neuromast development [GO:0048919]; retina layer formation [GO:0010842]; swimming behavior [GO:0036269]	hit with GO BP
GN016581	Chromosome_3A	3685	4	56	34.68113975576662	0.5072763028515241	74.60904179698606	55	0.7636363636363637	86.27362736273628	34	0.8823529411764706	54.5945945945946	21	0.5714285714285714	41.005067567567565	29	0.41379310344827586	methylated (>=50%)	Q8BIG4	F-box only protein 28	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN016582	Chromosome_3A	3952	5	53	35.4251012145749	0.42753189813009906	68.16796478157805	53	0.6981132075471698	36.71988388969521	13	0.46153846153846156	77.73851590106007	40	0.775	39.89795918367347	49	0.5306122448979592	methylated (>=50%)	A5PK63	Small ribosomal subunit protein eS17 (40S ribosomal protein S17)	ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	hit with GO BP
GN016583	Chromosome_3A	7255	5	93	33.90764989662302	0.44654604610037035	64.58418680868496	90	0.5666666666666667	88.63636363636364	2	1	64.14267834793492	88	0.5568181818181818	6.291591046581972	36	0.1111111111111111	methylated (>=50%)	Q7ZYG4	Osteoclast-stimulating factor 1	signal transduction [GO:0007165]	hit with GO BP
GN016584	Chromosome_3A	660	1	9	44.24242424242424	0.2885315976101423	94.08163265306122	9	1	94.08163265306122	9	1	NA	NA	NA	89.41176470588235	14	0.9285714285714286	methylated (>=50%)	Q9WVK4	EH domain-containing protein 1 (PAST homolog 1) (mPAST1)	cellular response to nerve growth factor stimulus [GO:1990090]; cholesterol homeostasis [GO:0042632]; cilium assembly [GO:0060271]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; intracellular protein transport [GO:0006886]; low-density lipoprotein particle clearance [GO:0034383]; neuron projection development [GO:0031175]; positive regulation of cholesterol storage [GO:0010886]; positive regulation of endocytic recycling [GO:2001137]; positive regulation of myoblast fusion [GO:1901741]; positive regulation of neuron projection development [GO:0010976]; protein homooligomerization [GO:0051260]; protein localization to cilium [GO:0061512]; protein localization to plasma membrane [GO:0072659]	hit with GO BP
GN016585	Chromosome_3A	1520	2	27	36.776315789473685	0.5321024789959548	88.9267461669506	27	1	96.69421487603306	16	1	85.45006165228114	11	1	3.9575289575289574	35	0.05714285714285714	methylated (>=50%)	Q3ZBE7	Protein yippee-like 5	cell population proliferation [GO:0008283]	hit with GO BP
GN016586	Chromosome_3A	3645	4	103	38.628257887517144	0.7602176360529065	0.5999172527927182	103	0	0.6932409012131716	28	0	0.5706521739130435	75	0	0.6111111111111112	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016587	Chromosome_3A	13424	12	346	39.60816448152563	0.6574272785305528	0.6181318681318682	66	0	0.6493506493506493	64	0	0	2	0	0	7	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016588	Chromosome_3A	13414	12	343	39.55568808707321	0.6539132090837189	0.41273584905660377	140	0	0.4445855827246745	132	0	0	8	0	0.9852216748768473	18	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016589	Chromosome_3A	6320	17	152	36.97784810126582	0.7036098972974477	0.4090909090909091	60	0	0.12755102040816327	33	0	0.5649717514124294	27	0	0.5492493592090809	45	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016590	Chromosome_3A	20147	29	501	38.621134660247186	0.6670046742182113	0.36638424547744447	154	0	0.2965159377316531	124	0	0.4793289394847214	30	0	0.6730007917656373	59	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016591	Chromosome_3A	20143	29	508	38.67348458521571	0.6746569451501897	0.5265374894692502	142	0	0.31938677738741617	111	0	0.9276437847866419	31	0	0.5434782608695652	47	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016592	Chromosome_3A	20160	29	498	38.635912698412696	0.6621017996817061	0.4316546762589928	171	0	0.4306367271608736	150	0	0.4352557127312296	21	0	0.6382978723404256	54	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN016593	Chromosome_3A	2762	3	56	36.278059377262856	0.6165743830150245	0.6068779501011463	56	0	1.1655011655011656	21	0	0.3795066413662239	35	0	0.48426150121065376	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016594	Chromosome_3A	642	2	23	36.7601246105919	1.0642162162162163	0.33112582781456956	23	0	0.47337278106508873	19	0	0	4	0	2.4905023216547066	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016595	Chromosome_3A	4686	2	127	36.21425522833974	0.8277539779681763	1.47034528333058	127	0	0.8025682182985554	20	0	1.5469613259668509	107	0	11.499813918868627	44	0	unmethylated (<10%)	P18503	Short-chain collagen C4	NA	hit, no GO BP
GN016596	Chromosome_3A	357	1	14	45.65826330532213	0.7547568710359408	0.37735849056603776	14	0	0.37735849056603776	14	0	NA	NA	NA	0.6756756756756757	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016597	Chromosome_3A	1785	2	27	33.94957983193277	0.526071627389126	0.48959608323133413	27	0	0	5	0	0.6015037593984962	22	0	0.57114477278371	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016598	Chromosome_3A	10658	12	169	35.944830174516795	0.4926353665414202	90.40613718411552	169	0.9526627218934911	94.18472063854048	30	1	89.69547501608406	139	0.9424460431654677	5.856832971800434	42	0.047619047619047616	methylated (>=50%)	P48601	26S proteasome regulatory subunit 4 (P26s4)	proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN016599	Chromosome_3A	5934	2	141	37.12504213009774	0.6923569598633647	0.6065857885615251	141	0	0.6065857885615251	141	0	NA	NA	NA	0.36527114357965723	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016602	Chromosome_3A	180	1	26	60.55555555555556	1.5757575757575757	0.946969696969697	26	0	0.946969696969697	26	0	NA	NA	NA	0.6083650190114068	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016603	Chromosome_3A	462	1	18	57.79220779220779	0.470096099491238	NA	0	NA	NA	NA	NA	NA	NA	NA	0.45839210155148097	82	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016604	Chromosome_3A	246	1	15	54.0650406504065	0.8355978260869565	2.227722772277228	15	0	2.227722772277228	15	0	NA	NA	NA	6.787330316742081	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016605	Chromosome_3A	819	2	33	40.78144078144078	0.975	0.6139677666922486	33	0	0.7525870178739417	29	0	0	4	0	11.520190023752969	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018943	Chromosome_3A	1395	3	8	34.2652329749104	0.1967525255196488	14.285714285714286	1	0	NA	NA	NA	14.285714285714286	1	0	55.587392550143264	13	0.5384615384615384	NA	NA	NA	NA	no Swiss-Prot hit
GN016606	Chromosome_3A	1229	3	13	33.19772172497966	0.38885778956847666	54.758620689655174	13	0.6923076923076923	63.43283582089552	7	0.8571428571428571	49.671772428884026	6	0.5	42.361111111111114	13	0.6153846153846154	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016607	Chromosome_3A	5461	7	162	34.737227613990115	0.9877872311918001	1.491882404563405	138	0	1.056338028169014	28	0	1.5722453222453223	110	0	0.3671562082777036	49	0	unmethylated (<10%)	O08699	15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC 1.1.1.141) (Eicosanoid/docosanoid dehydrogenase [NAD(+)]) (EC 1.1.1.-, EC 1.1.1.232) (Prostaglandin dehydrogenase 1)	ductus arteriosus closure [GO:0097070]; female pregnancy [GO:0007565]; kidney development [GO:0001822]; lipoxin biosynthetic process [GO:2001301]; negative regulation of cell cycle [GO:0045786]; ovulation [GO:0030728]; parturition [GO:0007567]; positive regulation of apoptotic process [GO:0043065]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; prostaglandin catabolic process [GO:1905344]; prostaglandin metabolic process [GO:0006693]; regulation of prostaglandin catabolic process [GO:1905828]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to lipopolysaccharide [GO:0032496]; thrombin-activated receptor signaling pathway [GO:0070493]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN016608	Chromosome_3A	4588	2	164	37.641673931996515	1.00963432503368	0.5516248950713515	164	0	0.55357848952155	74	0	0.5507745266781411	90	0	0.49448459490300495	57	0	unmethylated (<10%)	Q9VUL9	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Alpha(1,3)-fucosyltransferase A) (Glycoprotein 3-alpha-L-fucosyltransferase FucTA)	Golgi apparatus N-glycan diversification [GO:0016258]; nervous system development [GO:0007399]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN016609	Chromosome_3A	471	1	16	42.038216560509554	0.7768271312235852	5.9734513274336285	16	0	5.9734513274336285	16	0	NA	NA	NA	18.483245149911816	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016610	Chromosome_3A	20995	19	523	36.57537508930698	0.7475197578611065	2.7968900509150956	521	0.0019193857965451055	1.4148162703871094	115	0	3.090203928437383	406	0.0024630541871921183	2.669668703763268	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016611	Chromosome_3A	15020	14	232	35.62583222370173	0.49024887800897593	79.88724668596679	230	0.8782608695652174	78.94736842105263	43	0.8837209302325582	80.0633197648123	187	0.8770053475935828	64.6918013165769	23	0.782608695652174	methylated (>=50%)	Q99N27	Sorting nexin-1	early endosome to Golgi transport [GO:0034498]; endosomal transport [GO:0016197]; endosome membrane tubulation [GO:0097750]; intracellular protein transport [GO:0006886]; lamellipodium morphogenesis [GO:0072673]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; neuron projection development [GO:0031175]; positive regulation of protein catabolic process [GO:0045732]; receptor internalization [GO:0031623]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN016612	Chromosome_3A	7418	3	166	36.222701536802376	0.6823031640912436	91.44910773298083	166	0.9518072289156626	62.82828282828283	9	0.6666666666666666	92.66948057541562	157	0.9681528662420382	35.073292813729	57	0.40350877192982454	methylated (>=50%)	Q6GQG3	cAMP-regulated phosphoprotein 19-B (ARPP-19-B)	G2/M transition of mitotic cell cycle [GO:0000086]; mitotic cell cycle [GO:0000278]	hit with GO BP
GN016613	Chromosome_3A	22533	15	349	36.40438468024675	0.4682197150796311	88.71682470100538	347	0.9481268011527377	77.46987951807229	40	0.9	89.68282713302634	307	0.9543973941368078	59.96376811594203	55	0.5454545454545454	methylated (>=50%)	Q9UMX0	Ubiquilin-1 (Protein linking IAP with cytoskeleton 1) (PLIC-1) (hPLIC-1)	aggrephagy [GO:0035973]; autophagosome assembly [GO:0000045]; autophagosome maturation [GO:0097352]; cellular response to hypoxia [GO:0071456]; ERAD pathway [GO:0036503]; macroautophagy [GO:0016236]; negative regulation of store-operated calcium channel activity [GO:1901340]; negative regulation of toll-like receptor 3 signaling pathway [GO:0034140]; positive regulation of ERAD pathway [GO:1904294]; positive regulation of protein ubiquitination [GO:0031398]; regulation of macroautophagy [GO:0016241]; regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [GO:1902175]; regulation of protein ubiquitination [GO:0031396]; response to endoplasmic reticulum stress [GO:0034976]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN001628	Chromosome_3A	2923	6	34	34.895655148819706	0.38274044034676247	64.66809421841542	14	0.7857142857142857	56.91056910569106	7	0.7142857142857143	73.303167420814475	7	0.8571428571428571	7.25268349289237	49	0.061224489795918366	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016614	Chromosome_3A	300	1	13	49.666666666666664	0.7119386637458927	NA	0	NA	NA	NA	NA	NA	NA	NA	10	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016615	Chromosome_3A	10316	4	262	35.84722760759985	0.7906192519926426	1.4928404590230526	245	0	0.9	80	0	1.6439403593730089	165	0	0.688537869582827	48	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN016616	Chromosome_3A	740	2	21	44.45945945945946	0.5776092774308653	2.7874564459930316	21	0	2.727272727272727	20	0	4.166666666666667	1	0	0.7372654155495979	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016617	Chromosome_3A	564	1	14	41.13475177304964	0.5996810207336523	4.651162790697675	14	0	4.651162790697675	14	0	NA	NA	NA	1.3333333333333333	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016618	Chromosome_3A	807	1	11	42.627013630731106	0.30015215553677094	14.285714285714286	5	0	14.285714285714286	5	0	NA	NA	NA	3.108108108108108	35	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016619	Chromosome_3A	1146	1	47	40.924956369982546	0.9818440336869736	0.9879253567508233	47	0	0.9879253567508233	47	0	NA	NA	NA	0.5672609400324149	41	0	unmethylated (<10%)	Q8SWR3	Sex peptide receptor	G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of female receptivity, post-mating [GO:0045434]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN016620	Chromosome_3A	675	1	5	39.851851851851855	0.18669100564221705	3.5502958579881656	5	0	3.5502958579881656	5	0	NA	NA	NA	2.28494623655914	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016621	Chromosome_3A	624	1	31	45.3525641025641	0.9688470399679455	0.5050505050505051	31	0	0.5050505050505051	31	0	NA	NA	NA	1.024498886414254	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016622	Chromosome_3A	14598	7	363	36.38854637621592	0.7512104753484063	0.8232110989580335	363	0	0.5126182965299685	65	0	0.8763060330299967	298	0	0.6037735849056604	73	0	unmethylated (<10%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN016623	Chromosome_3A	1618	3	53	40.42027194066749	0.8023390718562874	0.358974358974359	53	0	0.3656307129798903	46	0	0.32362459546925565	7	0	0.45871559633027525	36	0	unmethylated (<10%)	Q12908	Ileal sodium/bile acid cotransporter (Apical sodium-dependent bile acid transporter) (ASBT) (Ileal Na(+)/bile acid cotransporter) (Ileal sodium-dependent bile acid transporter) (IBAT) (ISBT) (Na(+)-dependent ileal bile acid transporter) (Sodium/taurocholate cotransporting polypeptide, ileal) (Solute carrier family 10 member 2)	bile acid and bile salt transport [GO:0015721]	hit with GO BP
GN016624	Chromosome_3A	426	1	16	42.95774647887324	0.8147262730098016	0.8759124087591241	16	0	0.8759124087591241	16	0	NA	NA	NA	0.53085600530856	60	0	unmethylated (<10%)	Q3KNW5	Sodium-dependent organic anion transporter (SOAT) (Solute carrier family 10 member 6) (SLC10A6)	bile acid and bile salt transport [GO:0015721]; sodium-dependent organic anion transport [GO:0043251]	hit with GO BP
GN016625	Chromosome_3A	2409	1	83	38.1486093814861	0.9472390138523052	0.4272099901413079	83	0	0.4272099901413079	83	0	NA	NA	NA	0.3146633102580239	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016626	Chromosome_3A	26297	16	781	36.90154770506141	0.8735363567418004	0.7197990688556726	699	0	0.6232510811498346	185	0	0.7504236262406198	514	0	0.39980009995002497	30	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN015849	Chromosome_3A	554	1	3	39.35018050541516	0.1398989898989899	59.61538461538461	3	1	59.61538461538461	3	1	NA	NA	NA	77.73224043715847	16	0.875	NA	NA	NA	NA	no Swiss-Prot hit
GN016349	Chromosome_3A	741	1	4	40.89068825910931	0.1291390728476821	30.17241379310345	4	0	30.17241379310345	4	0	NA	NA	NA	62.3059866962306	10	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN016627	Chromosome_3A	645	1	12	46.35658914728682	0.3464017185821697	64.37007874015748	12	1	64.37007874015748	12	1	NA	NA	NA	61.297539149888145	28	0.8214285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016048	Chromosome_3A	3265	5	71	34.793261868300156	0.7209635031956085	1.2121212121212122	13	0	0	2	0	1.3029315960912051	11	0	3.4518828451882846	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016645	Chromosome_3A	2005	2	65	38.403990024937656	0.8925391737891738	0.5369127516778524	65	0	0.6180469715698393	34	0	0.5066789497927222	31	0	0.562962962962963	53	0	unmethylated (<10%)	Q2VL54	Paired box protein Pax-9	NA	hit, no GO BP
GN016644	Chromosome_3A	12593	6	390	36.50440721035496	0.9296196775527077	0.9900990099009901	9	0	0	4	0	1.8518518518518519	5	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016643	Chromosome_3A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016642	Chromosome_3A	678	1	25	54.57227138643068	0.5432692307692307	0.625	9	0	0.625	9	0	NA	NA	NA	1.1574074074074074	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016641	Chromosome_3A	1512	1	26	40.34391534391534	0.4228187919463087	87.14596949891067	26	0.9230769230769231	87.14596949891067	26	0.9230769230769231	NA	NA	NA	0.5788712011577424	39	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016640	Chromosome_3A	895	2	34	40.44692737430167	0.9288766788766789	0.6003430531732419	34	0	1.4336917562724014	11	0	0.3382187147688839	23	0	0.5501222493887531	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016639	Chromosome_3A	522	1	6	42.911877394636015	0.2650867541261109	0	6	0	0	6	0	NA	NA	NA	0.8626887131560029	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016638	Chromosome_3A	1010	2	37	39.9009900990099	0.939180698668007	0.486815415821501	37	0	0.5080440304826418	35	0	0	2	0	0.7301935012778387	43	0	unmethylated (<10%)	Q8K3K9	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN016646	Chromosome_3A	813	1	32	40.95940959409594	0.966778149386845	0.21119324181626187	32	0	0.21119324181626187	32	0	NA	NA	NA	12.191297530380243	38	0	unmethylated (<10%)	O81025	Immune-associated nucleotide-binding protein 10 (AtIAN10) (AIG1-like protein) (Putative protein PHLOEM PROTEIN 2-LIKE A3) (AtPP2-A3)	NA	hit, no GO BP
GN016634	Chromosome_3A	1876	2	45	35.18123667377399	0.78507593159182	10.664753706360592	45	0	12.287712287712287	24	0	9.174311926605505	21	0	6.296758104738155	24	0	sparse (10-50%)	Q8ND71	GTPase IMAP family member 8 (Immune-associated nucleotide-binding protein 9) (IAN-9) (Protein IanT)	NA	hit, no GO BP
GN016647	Chromosome_3A	6467	3	83	34.46729550023195	0.4334996494923292	43.72789681714167	83	0.39759036144578314	46.76535087719298	38	0.5	41.870600067046595	45	0.3111111111111111	25.68134171907757	20	0.25	sparse (10-50%)	Q6NW40	Repulsive guidance molecule B (DRG11-responsive axonal guidance and outgrowth of neurite) (DRAGON)	BMP signaling pathway [GO:0030509]; cell adhesion [GO:0007155]; positive regulation of DNA-templated transcription [GO:0045893]; signal transduction [GO:0007165]	hit with GO BP
GN016657	Chromosome_3A	2885	4	34	38.128249566724435	0.3440836829477052	81.58415841584159	34	0.9705882352941176	81.92331101643336	26	0.9615384615384616	80.10610079575596	8	1	1.545972335231896	27	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016658	Chromosome_3A	7853	4	179	35.41321787851776	0.7309925615605746	87.18142186452046	179	0.9664804469273743	60.78431372549019	3	0.6666666666666666	87.64073694984647	176	0.9715909090909091	60.97012528107935	43	0.6511627906976745	methylated (>=50%)	A5PJA1	Adenylate kinase isoenzyme 6 (AK6) (EC 2.7.4.3) (Coilin-interacting nuclear ATPase protein) (Dual activity adenylate kinase/ATPase) (AK/ATPase)	ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN016659	Chromosome_3A	5320	6	55	36.8609022556391	0.31552612849656003	82.04633204633204	55	0.9818181818181818	85.43046357615894	14	1	81.23003194888179	41	0.975609756097561	90.58469475494411	31	1	methylated (>=50%)	Q5U2Q4	Protein mono-ADP-ribosyltransferase PARP16 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 15) (Poly [ADP-ribose] polymerase 16) (PARP-16)	cellular response to leukemia inhibitory factor [GO:1990830]; endoplasmic reticulum unfolded protein response [GO:0030968]; IRE1-mediated unfolded protein response [GO:0036498]; negative regulation of cytoplasmic translation [GO:2000766]; protein auto-ADP-ribosylation [GO:0070213]	hit with GO BP
GN016660	Chromosome_3A	3816	6	50	40.382599580712785	0.32142965441258226	78.91770011273957	50	0.94	80.28169014084507	44	0.9545454545454546	73.44632768361582	6	0.8333333333333334	75.04132231404958	19	1	methylated (>=50%)	Q8BW86	Rho guanine nucleotide exchange factor 33	NA	hit, no GO BP
GN016663	Chromosome_3A	13120	14	151	34.298780487804876	0.3913454098517066	75.14945652173913	125	0.816	82.71461716937355	22	0.9090909090909091	74.14589104339797	103	0.7961165048543689	42.780748663101605	44	0.4318181818181818	methylated (>=50%)	Q9NUW8	Tyrosyl-DNA phosphodiesterase 1 (Tyr-DNA phosphodiesterase 1) (EC 3.1.4.-)	DNA repair [GO:0006281]; double-strand break repair [GO:0006302]; regulation of DNA repair [GO:0006282]; single strand break repair [GO:0000012]	hit with GO BP
GN016664	Chromosome_3A	3065	3	40	38.00978792822186	0.36245380635624536	70.85836909871244	40	0.8	86.22222222222223	6	1	69.21615201900238	34	0.7647058823529411	74.7911758406511	45	0.9111111111111111	methylated (>=50%)	Q6DGZ1	B9 domain-containing protein 2	cilium assembly [GO:0060271]; establishment of planar polarity [GO:0001736]; establishment or maintenance of cell polarity [GO:0007163]; opsin transport [GO:0036372]	hit with GO BP
GN016665	Chromosome_3A	6727	9	64	34.33922996878252	0.3248346129702062	77.53148614609572	63	0.8888888888888888	79.06026557711951	19	0.8421052631578947	77.03109327983952	44	0.9090909090909091	20.92511013215859	35	0.3142857142857143	methylated (>=50%)	Q08BY0	Protein arginine methyltransferase NDUFAF7, mitochondrial (EC 2.1.1.320) (NADH dehydrogenase [ubiquinone] complex I, assembly factor 7) (Protein midA homolog)	chordate embryonic development [GO:0043009]; mitochondrial respiratory chain complex I assembly [GO:0032981]; peptidyl-arginine methylation, to symmetrical-dimethyl arginine [GO:0019918]	hit with GO BP
GN016666	Chromosome_3A	18240	16	196	33.4046052631579	0.38686881300886206	62.57167680278019	194	0.6907216494845361	78.13186813186813	18	0.8888888888888888	61.235849056603776	176	0.6704545454545454	82.97872340425532	20	0.95	methylated (>=50%)	Q8R2E9	ERO1-like protein beta (ERO1-L-beta) (EC 1.8.3.2) (Endoplasmic reticulum oxidoreductase beta) (Endoplasmic reticulum oxidoreductin-1-like protein B) (Oxidoreductin-1-L-beta)	cell redox homeostasis [GO:0045454]; extracellular matrix organization [GO:0030198]; glucose homeostasis [GO:0042593]; insulin processing [GO:0030070]; peptidyl-proline hydroxylation to 4-hydroxy-L-proline [GO:0018401]; protein folding in endoplasmic reticulum [GO:0034975]; protein maturation [GO:0051604]	hit with GO BP
GN016667	Chromosome_3A	3976	6	49	36.39336016096579	0.3755570976945023	65.83916083916084	49	0.7551020408163265	40.309155766944116	15	0.4666666666666667	76.47350173353145	34	0.8823529411764706	1.610738255033557	54	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016668	Chromosome_3A	2031	1	96	43.22993599212211	1.0167709637046307	0.5373134328358209	96	0	0.5373134328358209	96	0	NA	NA	NA	2.710027100271003	47	0.02127659574468085	unmethylated (<10%)	Q62318	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-A-interacting protein) (KRIP-1) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; convergent extension involved in axis elongation [GO:0060028]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; embryo implantation [GO:0007566]; embryonic placenta morphogenesis [GO:0060669]; epigenetic programming of gene expression [GO:0043045]; epithelial to mesenchymal transition [GO:0001837]; genomic imprinting [GO:0071514]; in utero embryonic development [GO:0001701]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of single stranded viral RNA replication via double stranded DNA intermediate [GO:0045869]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN016669	Chromosome_3A	5310	6	64	38.58757062146893	0.32384528154451636	76.11336032388664	63	0.6666666666666666	64.51104100946372	46	0.5434782608695652	88.35274542429285	17	1	0.7735946364105208	45	0	methylated (>=50%)	Q0V989	Coiled-coil domain-containing protein 85C	NA	hit, no GO BP
GN016670	Chromosome_3A	567	1	20	51.851851851851855	1.1925544221264066	6.315789473684211	12	0	6.315789473684211	12	0	NA	NA	NA	1.9801980198019802	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016671	Chromosome_3A	432	1	15	52.083333333333336	1.1747643219724437	1.9607843137254901	3	0	1.9607843137254901	3	0	NA	NA	NA	1.1214953271028036	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016672	Chromosome_3A	450	1	16	51.55555555555556	1.2230338032953967	2.6315789473684212	6	0	2.6315789473684212	6	0	NA	NA	NA	0.5612065941774815	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016686	Chromosome_3A	816	1	35	42.15686274509804	0.965386695511087	0.25906735751295334	23	0	0.25906735751295334	23	0	NA	NA	NA	0.5952380952380952	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016685	Chromosome_3A	2064	5	47	38.03294573643411	0.6301430371688774	20.413793103448278	47	0.23404255319148937	31.603408210689388	31	0.3548387096774194	4.072398190045249	16	0	0.9034712315739419	41	0	sparse (10-50%)	Q04861	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]	canonical NF-kappaB signal transduction [GO:0007249]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN016684	Chromosome_3A	13024	7	185	34.3519656019656	0.4817777692463964	81.98904420098225	182	0.8571428571428571	62.52873563218391	7	0.7142857142857143	82.82281099182508	175	0.8628571428571429	44.29920116194626	24	0.5833333333333334	methylated (>=50%)	Q7ZT47	DNA replication complex GINS protein PSF1 (GINS complex subunit 1)	DNA replication [GO:0006260]; DNA strand elongation involved in mitotic DNA replication [GO:1902983]	hit with GO BP
GN016683	Chromosome_3A	10472	6	89	35.30366692131398	0.2733311983182651	62.599620493358636	89	0.6741573033707865	47.83362218370884	23	0.4782608695652174	66.73955296404276	66	0.7424242424242424	37.913299044819986	37	0.2702702702702703	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016682	Chromosome_3A	9017	13	104	36.66407896196074	0.3449597845858999	80.8199715851431	104	0.9038461538461539	85.11932615816565	45	0.8888888888888888	77.52688172043011	59	0.9152542372881356	51.51898734177215	46	0.5	methylated (>=50%)	Q99NB1	Acetyl-coenzyme A synthetase 2-like, mitochondrial (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acetyl-CoA synthetase 2) (AceCS2) (Acyl-CoA synthetase short-chain family member 1) (Propionate--CoA ligase) (EC 6.2.1.17)	acetate biosynthetic process [GO:0019413]; acetyl-CoA biosynthetic process [GO:0006085]; ethanol catabolic process [GO:0006068]; propionate biosynthetic process [GO:0019542]	hit with GO BP
GN016681	Chromosome_3A	1764	1	69	46.54195011337868	0.724293059125964	0.7627118644067796	60	0	0.7627118644067796	60	0	NA	NA	NA	0.49987503124218946	80	0	unmethylated (<10%)	Q6PCG7	Interferon regulatory factor 2-binding protein-like B (Enhanced at puberty protein 1 homolog B)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016680	Chromosome_3A	837	1	13	35.722819593787335	0.49712171052631576	0.6499535747446611	12	0	0.6499535747446611	12	0	NA	NA	NA	0.7590132827324478	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016679	Chromosome_3A	11978	8	204	34.24611788278511	0.5819226907534879	81.41335109039454	202	0.8366336633663366	57.90533736153071	22	0.45454545454545453	83.53143997822339	180	0.8833333333333333	64.62196861626248	16	0.75	methylated (>=50%)	Q5RE15	26S proteasome non-ATPase regulatory subunit 8 (26S proteasome regulatory subunit RPN12)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; proteolysis [GO:0006508]	hit with GO BP
GN016678	Chromosome_3A	9167	13	149	37.23137340460347	0.47387234048458465	74.27587086895495	144	0.8819444444444444	87.60180995475113	27	0.9629629629629629	72.08853238265003	117	0.8632478632478633	66.78765880217786	19	0.6842105263157895	methylated (>=50%)	Q8NCA5	Protein FAM98A	lysosome localization [GO:0032418]; positive regulation of ruffle assembly [GO:1900029]; tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]	hit with GO BP
GN016677	Chromosome_3A	1083	2	26	38.59649122807018	0.6475336322869956	1.0101010101010102	26	0	0.9009009009009009	21	0	1.3333333333333333	5	0	0.9683666881859264	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016676	Chromosome_3A	777	1	23	38.35263835263835	0.8102189781021898	0.28708133971291866	23	0	0.28708133971291866	23	0	NA	NA	NA	0.6216006216006216	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016675	Chromosome_3A	231	1	11	51.082251082251084	0.7352430555555556	0	8	0	0	8	0	NA	NA	NA	0.4509582863585118	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016674	Chromosome_3A	261	1	15	52.490421455938694	0.8680709534368071	0	15	0	0	15	0	NA	NA	NA	2.7570093457943927	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016673	Chromosome_3A	3913	3	85	33.96371070789675	0.7541140087154861	0.7953723788864787	84	0	0.6083650190114068	36	0	0.8821453775582216	48	0	0.46760187040748163	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016687	Chromosome_3A	393	1	13	45.038167938931295	0.6788466648950305	0.4418262150220913	13	0	0.4418262150220913	13	0	NA	NA	NA	0.3232758620689655	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016688	Chromosome_3A	279	1	4	43.01075268817204	0.31313131313131315	0.9852216748768473	4	0	0.9852216748768473	4	0	NA	NA	NA	0.7337526205450734	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016689	Chromosome_3A	33994	20	500	35.34447255398011	0.475156183448921	79.33658125827017	491	0.9022403258655805	72.23174494343503	47	0.8085106382978723	80.01977913301467	444	0.9121621621621622	2.039870190078813	51	0	methylated (>=50%)	Q9P2K2	Thioredoxin domain-containing protein 16	NA	hit, no GO BP
GN016690	Chromosome_3A	702	1	23	48.57549857549858	0.7420036764705882	0.16286644951140064	23	0	0.16286644951140064	23	0	NA	NA	NA	0.41688379364252215	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016691	Chromosome_3A	50424	13	594	36.496509598603836	0.3578800409298588	63.937125283464326	569	0.7223198594024605	59.62558502340094	63	0.6984126984126984	64.4138549644656	506	0.7252964426877471	66.46778042959427	22	0.6818181818181818	methylated (>=50%)	Q9FN03	Ultraviolet-B receptor UVR8 (Protein UV-B RESISTANCE 8) (RCC1 domain-containing protein UVR8)	entrainment of circadian clock [GO:0009649]; response to UV [GO:0009411]; response to UV-B [GO:0010224]	hit with GO BP
GN016692	Chromosome_3A	915	1	23	48.96174863387978	0.42657342657342656	1.3071895424836601	19	0	1.3071895424836601	19	0	NA	NA	NA	1.974214343271555	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016693	Chromosome_3A	5904	7	191	38.736449864498645	0.8658779301194162	0.6773203513599323	191	0	0.3414911781445646	46	0	0.7540301612064483	145	0	1.6405395552314983	54	0	unmethylated (<10%)	O05465	Beta-lactamase (EC 3.5.2.6) (Cephalosporinase)	antibiotic catabolic process [GO:0017001]	hit with GO BP
GN016694	Chromosome_3A	5532	6	165	38.64786695589299	0.7987839455610862	1.07824163671551	165	0	0.6339144215530903	60	0	1.316348195329087	105	0	0.7865168539325843	59	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN016695	Chromosome_3A	476	2	14	42.016806722689076	0.6664666466646665	0.25806451612903225	14	0	0.29239766081871343	12	0	0	2	0	0.790106492614222	50	0	unmethylated (<10%)	Q91YD4	Transient receptor potential cation channel subfamily M member 2 (Long transient receptor potential channel 2) (LTrpC-2) (LTrpC2) (Transient receptor potential channel 7) (TrpC7)	calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; cellular response to calcium ion [GO:0071277]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to temperature stimulus [GO:0071502]; dendritic cell chemotaxis [GO:0002407]; dendritic cell differentiation [GO:0097028]; manganese ion transport [GO:0006828]; positive regulation of cellular response to oxidative stress [GO:1900409]; positive regulation of insulin secretion [GO:0032024]; protein homotetramerization [GO:0051289]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of filopodium assembly [GO:0051489]; release of sequestered calcium ion into cytosol [GO:0051209]; response to heat [GO:0009408]; response to hydroperoxide [GO:0033194]; response to purine-containing compound [GO:0014074]; temperature homeostasis [GO:0001659]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN016696	Chromosome_3A	1701	1	21	40.564373897707235	0.3004188252708067	3.8095238095238093	21	0	3.8095238095238093	21	0	NA	NA	NA	0.43459365493263796	38	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN016697	Chromosome_3A	8791	5	194	30.258218632692525	1.0408128018240195	24.244560838033845	180	0.16666666666666666	11.038353601496725	24	0	25.838130714527598	156	0.19230769230769232	0.9517095523440254	46	0	sparse (10-50%)	Q95JD5	Sulfotransferase 1B1 (ST1B1) (cSULT1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN016698	Chromosome_3A	1557	1	59	41.55427103403982	0.8806729939603106	0.4151838671411625	59	0	0.4151838671411625	59	0	NA	NA	NA	0.4374453193350831	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016699	Chromosome_3A	874	2	19	36.95652173913044	0.6367331288343558	1.0794896957801767	19	0	1.1293634496919918	18	0	0	1	0	1.5342960288808665	53	0	unmethylated (<10%)	Q98ST7	DBH-like monooxygenase protein 1 (EC 1.14.17.-) (DBH-related protein) (Monooxygenase X)	NA	hit, no GO BP
GN019983	Chromosome_3A	837	4	17	40.97968936678614	0.5029692470837752	17.578125	13	0	17.578125	13	0	NA	NA	NA	1.4727540500736378	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016759	Chromosome_3A	1674	1	51	40.20310633213859	0.7673929457447956	0.44493882091212456	51	0	0.44493882091212456	51	0	NA	NA	NA	0.6112469437652812	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016758	Chromosome_3A	2624	4	66	34.451219512195124	0.8486125471018576	0.8174988952717631	66	0	0.8978675645342312	15	0	0.797799174690509	51	0	1.289237668161435	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016757	Chromosome_3A	467	2	14	38.54389721627409	0.8869895536562203	0.0755287009063444	12	0	0.0755287009063444	12	0	NA	NA	NA	0.4238485447866629	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016756	Chromosome_3A	966	4	5	31.677018633540374	0.20861227486718784	91.23222748815166	5	1	92.88702928870293	3	1	89.07103825136612	2	1	52.19277108433735	51	0.47058823529411764	methylated (>=50%)	Q9NVM6	DnaJ homolog subfamily C member 17	spliceosomal complex disassembly [GO:0000390]	hit with GO BP
GN016760	Chromosome_3A	1326	1	65	44.042232277526395	1.0108722423560044	0.554016620498615	64	0	0.554016620498615	64	0	NA	NA	NA	0.3778770182068018	56	0	unmethylated (<10%)	Q9W4Y2	PDF receptor (Pigment-dispersing factor receptor) (Protein groom-of-PDF)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; circadian rhythm [GO:0007623]; circadian sleep/wake cycle [GO:0042745]; circadian temperature homeostasis [GO:0060086]; copper ion homeostasis [GO:0055070]; G protein-coupled receptor signaling pathway [GO:0007186]; gravitaxis [GO:0042332]; locomotor rhythm [GO:0045475]; neuropeptide signaling pathway [GO:0007218]; positive regulation of calcium-mediated signaling [GO:0050850]; regulation of circadian rhythm [GO:0042752]; regulation of circadian sleep/wake cycle [GO:0042749]; response to paraquat [GO:1901562]	hit with GO BP
GN016761	Chromosome_3A	864	1	7	41.08796296296296	0.19214639725505148	85.83690987124463	7	1	85.83690987124463	7	1	NA	NA	NA	79.67213114754098	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016762	Chromosome_3A	4134	9	48	35.65553942912433	0.365540808149656	73.77240841777085	48	0.7916666666666666	69.26553672316385	20	0.75	76.14515169541939	28	0.8214285714285714	47.220405493786785	60	0.4666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016763	Chromosome_3A	2170	3	25	33.31797235023041	0.41512985721063345	56.96767001114827	25	0.56	76.93315858453474	11	0.8181818181818182	42.192046556741026	14	0.35714285714285715	3.395924890131842	53	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016764	Chromosome_3A	7763	6	84	34.27798531495556	0.3738742354433225	85.15653775322284	84	0.9761904761904762	92.13263979193758	26	1	82.39979445015416	58	0.9655172413793104	89.23719958202717	14	0.9285714285714286	methylated (>=50%)	Q7TQC7	G patch domain-containing protein 2	cell population proliferation [GO:0008283]	hit with GO BP
GN016765	Chromosome_3A	17358	10	177	36.61712178822445	0.31971561187651953	77.43125150324701	176	0.8863636363636364	56.87134502923977	12	0.6666666666666666	78.6241411485283	164	0.9024390243902439	48.705572619569985	36	0.4166666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016766	Chromosome_3A	1461	1	32	41.82067077344285	0.5010395456006859	3.5014005602240896	32	0	3.5014005602240896	32	0	NA	NA	NA	2.837624802942722	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016767	Chromosome_3A	6653	12	87	35.95370509544566	0.4066994521466198	67.70319536778898	87	0.7816091954022989	70.26439695762404	57	0.8070175438596491	63.98527865404837	30	0.7333333333333333	58.8586595885866	31	0.41935483870967744	methylated (>=50%)	Q8IYT3	Coiled-coil domain-containing protein 170	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN016768	Chromosome_3A	3286	2	100	36.457699330493	0.9181309915311776	1.4435389988358556	100	0	1.1272141706924315	29	0	1.5722240419259745	71	0	0.7102803738317757	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016769	Chromosome_3A	780	1	6	39.23076923076923	0.20096186877361732	75.89285714285714	6	1	75.89285714285714	6	1	NA	NA	NA	75	3	1	methylated (>=50%)	Q58EM4	Damage-control phosphatase 1 (EC 3.1.3.-) (Acidic residue methyltransferase 1) (Protein-glutamate O-methyltransferase) (EC 2.1.1.-) (Sugar phosphate phosphatase ARMT1)	DNA damage response [GO:0006974]	hit with GO BP
GN016770	Chromosome_3A	471	1	0	44.37367303609342	0	NA	0	NA	NA	NA	NA	NA	NA	NA	46.359743040685224	18	0.6111111111111112	NA	NA	NA	NA	no Swiss-Prot hit
GN016771	Chromosome_3A	363	1	1	45.17906336088154	0.06976744186046512	85	1	1	85	1	1	NA	NA	NA	64.23357664233576	9	0.8888888888888888	NA	NA	NA	NA	no Swiss-Prot hit
GN016772	Chromosome_3A	3254	2	41	32.97480024585126	0.46390024757295056	55.990400590732875	39	0.6666666666666666	92.12962962962963	4	1	54.48952124591425	35	0.6285714285714286	93.7984496124031	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016773	Chromosome_3A	2254	3	42	35.004436557231585	0.6088052579454398	63.72719374456994	42	0.6904761904761905	69.89966555183946	25	0.72	57.05244122965642	17	0.6470588235294118	45.267243953418934	45	0.6444444444444445	methylated (>=50%)	Q9CQG1	Putative glutathione-specific gamma-glutamylcyclotransferase 2 (Gamma-GCG 2) (EC 4.3.2.7) (Cation transport regulator-like protein 2)	glutathione catabolic process [GO:0006751]	hit with GO BP
GN016774	Chromosome_3A	855	1	29	42.33918128654971	0.7572148419606046	0.778816199376947	29	0	0.778816199376947	29	0	NA	NA	NA	57.02675245513038	46	0.5869565217391305	unmethylated (<10%)	X1WBB5	Palmitoyltransferase ZDHHC22 (EC 2.3.1.225) (DHHC domain-containing cysteine-rich protein 22) (Zinc finger DHHC domain-containing protein 22)	protein targeting to membrane [GO:0006612]	hit with GO BP
GN016775	Chromosome_3A	969	1	41	45.5108359133127	0.8189857761286333	0.8547008547008547	41	0	0.8547008547008547	41	0	NA	NA	NA	0.4442250740375123	36	0	unmethylated (<10%)	Q3T106	Serine/arginine-rich splicing factor 7 (Splicing factor, arginine/serine-rich 7)	negative regulation of mRNA splicing, via spliceosome [GO:0048025]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN016776	Chromosome_3A	237	1	2	60.33755274261603	0.10193548387096774	0	1	0	0	1	0	NA	NA	NA	0.628722700198544	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016777	Chromosome_3A	879	1	38	44.141069397042095	0.9001536098310292	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q9ERS1	Potassium channel subfamily K member 12 (Tandem pore domain halothane-inhibited potassium channel 2) (THIK-2)	NA	hit, no GO BP
GN016782	Chromosome_3A	879	1	38	44.141069397042095	0.9001536098310292	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q9ERS1	Potassium channel subfamily K member 12 (Tandem pore domain halothane-inhibited potassium channel 2) (THIK-2)	NA	hit, no GO BP
GN016781	Chromosome_3A	1593	2	21	32.328939108600125	0.5045396959459459	11.507692307692308	21	0	12.619502868068833	4	0	10.980036297640654	17	0	0.369359242010599	67	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016780	Chromosome_3A	426	1	5	41.54929577464789	0.285829307568438	0.6896551724137931	5	0	0.6896551724137931	5	0	NA	NA	NA	1.2135001896094046	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016755	Chromosome_3A	17552	14	247	35.60847766636281	0.4470818288702432	91.38376017470716	247	1	91.22600861731297	50	1	91.41583054626533	197	1	94.84702093397746	63	1	methylated (>=50%)	O95149	Snurportin-1 (RNA U transporter 1)	cytoskeleton organization [GO:0007010]; protein complex oligomerization [GO:0051259]; protein import into nucleus [GO:0006606]; protein tetramerization [GO:0051262]; RNA import into nucleus [GO:0006404]; snRNA import into nucleus [GO:0061015]	hit with GO BP
GN016753	Chromosome_3A	321	1	11	43.925233644859816	0.7133333333333334	0.4	11	0	0.4	11	0	NA	NA	NA	0.9124087591240876	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016754	Chromosome_3A	2301	1	77	39.63494132985658	0.8604542739338841	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016752	Chromosome_3A	2295	1	78	39.82570806100218	0.8655185084903106	0.46511627906976744	69	0	0.46511627906976744	69	0	NA	NA	NA	0.4074505238649593	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016751	Chromosome_3A	312	1	13	44.87179487179487	0.8338815789473685	1.3888888888888888	8	0	1.3888888888888888	8	0	NA	NA	NA	1.1162790697674418	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012222	Chromosome_3A	522	1	25	42.337164750957854	1.0875	1.0332950631458093	25	0	1.0332950631458093	25	0	NA	NA	NA	1.1607910576096303	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016750	Chromosome_3A	1658	2	48	40.168878166465625	0.7184746497183302	0.9586578789694428	48	0	0.9586578789694428	48	0	NA	NA	NA	1.7763157894736843	59	0	unmethylated (<10%)	Q2TB18	Single-strand DNA endonuclease ASTE1 (EC 3.1.-.-) (Protein asteroid homolog 1)	double-strand break repair via homologous recombination [GO:0000724]; double-strand break repair via nonhomologous end joining [GO:0006303]	hit with GO BP
GN002477	Chromosome_3A	1068	3	21	41.947565543071164	0.4588379705400982	39.285714285714285	2	0	39.285714285714285	2	0	NA	NA	NA	79.76855546687949	30	1	NA	NA	NA	NA	no Swiss-Prot hit
GN016749	Chromosome_3A	18610	10	345	35.72272971520688	0.5815751429378899	35.12571859938447	292	0.3835616438356164	73.8157894736842	18	0.7222222222222222	33.33940829840228	274	0.3613138686131387	0.43973098810139677	54	0	sparse (10-50%)	Q6R3M4	DNA polymerase iota (EC 2.7.7.7) (Rad30 homolog B)	cellular response to UV-C [GO:0071494]; DNA repair [GO:0006281]; translesion synthesis [GO:0019985]	hit with GO BP
GN016748	Chromosome_3A	1471	3	48	38.81713120326309	0.8776195092848087	0.4610655737704918	48	0	0.6128702757916241	23	0	0.30832476875642345	25	0	2.1314387211367674	49	0	unmethylated (<10%)	P06707	Troponin C, isotype alpha	NA	hit, no GO BP
GN016747	Chromosome_3A	5832	4	136	35.631001371742116	0.7351862408408993	0.4071246819338422	128	0	0.32397408207343414	19	0	0.42262024552223787	109	0	0.3305178112376056	42	0	unmethylated (<10%)	P04464	Calmodulin (CaM)	NA	hit, no GO BP
GN016746	Chromosome_3A	3553	5	90	35.49113425274416	0.8052428798066027	0.48471290082028334	89	0	0.5957446808510638	31	0	0.453568870852232	58	0	0.24434941967012827	59	0	unmethylated (<10%)	Q2HJ98	Oxaloacetate tautomerase FAHD1, mitochondrial (EC 5.3.2.2) (Acylpyruvase FAHD1) (EC 3.7.1.5) (Fumarylacetoacetate hydrolase domain-containing protein 1) (Oxaloacetate decarboxylase) (OAA decarboxylase) (EC 4.1.1.112)	oxaloacetate metabolic process [GO:0006107]	hit with GO BP
GN016745	Chromosome_3A	797	2	16	34.88080301129234	0.6616853466168535	0.19665683382497542	16	0	0.18867924528301888	9	0	0.2053388090349076	7	0	0.4590395480225989	48	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN016744	Chromosome_3A	267	1	7	43.82022471910113	0.5461718293395675	0	7	0	0	7	0	NA	NA	NA	1.0806317539484622	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016743	Chromosome_3A	2008	2	59	39.691235059760956	0.7460453400503778	1.7536355859709154	59	0	2.0652173913043477	33	0	1.5514809590973202	26	0	2.1636240703177823	65	0	unmethylated (<10%)	Q6NZ04	Homeobox protein six1b (Homeobox protein six1a) (Sine oculis homeobox homolog 1a) (Sine oculis homeobox homolog 1b)	adenohypophysis development [GO:0021984]; chordate pharyngeal muscle development [GO:0043282]; extraocular skeletal muscle development [GO:0002074]; inner ear development [GO:0048839]; peripheral nervous system neuron development [GO:0048935]; regulation of skeletal muscle cell proliferation [GO:0014857]; regulation of transcription by RNA polymerase II [GO:0006357]; skeletal muscle fiber development [GO:0048741]; striated muscle cell differentiation [GO:0051146]	hit with GO BP
GN016742	Chromosome_3A	899	2	25	38.15350389321468	0.7696390658174098	0.30511060259344014	23	0	0.30511060259344014	23	0	NA	NA	NA	0.5947660586835845	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016741	Chromosome_3A	996	1	43	42.16867469879518	0.9840088227185001	0.8359456635318704	43	0	0.8359456635318704	43	0	NA	NA	NA	0.35074045206547155	47	0	unmethylated (<10%)	Q865K9	Membrane progestin receptor beta (mPR beta) (Progestin and adipoQ receptor family member VIII)	response to steroid hormone [GO:0048545]	hit with GO BP
GN016740	Chromosome_3A	12025	16	102	35.318087318087315	0.275453047331976	76.29515757109915	94	0.8297872340425532	73.83900928792569	23	0.9130434782608695	76.90389411087665	71	0.8028169014084507	74.64187747637915	39	0.7948717948717948	methylated (>=50%)	Q9GKS9	Double zinc ribbon and ankyrin repeat-containing protein 1	eye photoreceptor cell development [GO:0042462]	hit with GO BP
GN016739	Chromosome_3A	6698	5	109	38.19050462824724	0.4475689010107178	49.67411545623836	109	0.47706422018348627	54.406130268199234	53	0.5283018867924528	46.172539489671934	56	0.42857142857142855	0.5012531328320802	72	0	sparse (10-50%)	P08842	Steryl-sulfatase (EC 3.1.6.2) (Arylsulfatase C) (ASC) (Estrone sulfatase) (Steroid sulfatase) (Steryl-sulfate sulfohydrolase)	epidermis development [GO:0008544]; steroid catabolic process [GO:0006706]	hit with GO BP
GN016738	Chromosome_3A	213	1	9	43.66197183098591	1.1576086956521738	83.3976833976834	9	0.8888888888888888	83.3976833976834	9	0.8888888888888888	NA	NA	NA	77.41228070175438	37	0.918918918918919	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016737	Chromosome_3A	4971	3	145	36.89398511365923	0.8572473463562572	0.5057471264367817	143	0	0.4622496147919877	73	0	0.5242463958060288	70	0	0.5548705302096177	43	0	unmethylated (<10%)	Q9VUI3	Echinoderm microtubule-associated protein-like CG42247	adult locomotory behavior [GO:0008344]; cellular response to mechanical stimulus [GO:0071260]; intracellular signal transduction [GO:0035556]; melanotic encapsulation of foreign target [GO:0035011]; microtubule cytoskeleton organization [GO:0000226]; sensory perception of sound [GO:0007605]	hit with GO BP
GN016736	Chromosome_3A	15170	7	146	35.1219512195122	0.3141289672997081	79.5741520178262	146	0.910958904109589	83.62652232746956	13	1	79.3109509579891	133	0.9022556390977443	87.98256537982566	26	0.9615384615384616	methylated (>=50%)	P24329	Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)	cellular detoxification of nitrogen compound [GO:0070458]; epithelial cell differentiation [GO:0030855]; iron-sulfur cluster assembly [GO:0016226]; rRNA import into mitochondrion [GO:0035928]; rRNA transport [GO:0051029]	hit with GO BP
GN016735	Chromosome_3A	10194	5	145	35.226603884638024	0.458581166691693	89.68175528760625	145	0.993103448275862	95.9694232105629	22	1	88.63924415255214	123	0.991869918699187	91.33058113686884	60	1	methylated (>=50%)	Q0MQ89	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Complex I-B16.6) (CI-B16.6) (NADH-ubiquinone oxidoreductase B16.6 subunit)	negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN016734	Chromosome_3A	318	1	20	45.911949685534594	1.2460815047021943	1.171303074670571	20	0	1.171303074670571	20	0	NA	NA	NA	0.9720915647538413	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016733	Chromosome_3A	17338	21	151	32.27015803437536	0.33530560523448255	69.58592132505176	149	0.8120805369127517	77.5907417148869	33	0.8787878787878788	67.62469390385358	116	0.7931034482758621	52.11024978466839	41	0.5609756097560976	methylated (>=50%)	Q16959	Dynein intermediate chain 2, ciliary	cilium movement [GO:0003341]; outer dynein arm assembly [GO:0036158]; regionalization [GO:0003002]	hit with GO BP
GN016732	Chromosome_3A	9961	5	115	33.329986949101496	0.4170703512556548	82.67220753053772	114	0.9385964912280702	53.1328320802005	6	0.6666666666666666	84.23495094139486	108	0.9537037037037037	15.251299826689774	19	0.15789473684210525	methylated (>=50%)	Q6DC60	Protein FAM219A	NA	hit, no GO BP
GN016731	Chromosome_3A	3198	2	63	37.429643527204504	0.563648774919848	34.83720930232558	55	0.34545454545454546	45.57416267942584	17	0.5882352941176471	28.006088280060883	38	0.23684210526315788	0.8163265306122449	44	0	sparse (10-50%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN016730	Chromosome_3A	27183	24	774	35.35665673398815	0.9125541393665639	14.100358220742956	736	0.028532608695652172	14.405458089668617	103	0	14.048741879101671	633	0.03317535545023697	1.616994292961319	76	0	sparse (10-50%)	Q90980	Cyclic nucleotide-gated channel rod photoreceptor subunit alpha (CNG channel 3) (CNG-3) (CNG3)	monoatomic cation transmembrane transport [GO:0098655]; sensory perception of chemical stimulus [GO:0007606]	hit with GO BP
GN016729	Chromosome_3A	2959	2	67	37.27610679283542	0.653566954572427	74.33315187806205	67	0.7910447761194029	0	5	0	80.94250148192057	62	0.8548387096774194	70.01321003963012	58	0.7068965517241379	methylated (>=50%)	Q86SX6	Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5)	[2Fe-2S] cluster assembly [GO:0044571]; cell redox homeostasis [GO:0045454]; hemopoiesis [GO:0030097]; intracellular iron ion homeostasis [GO:0006879]; iron-sulfur cluster assembly [GO:0016226]; protein maturation [GO:0051604]	hit with GO BP
GN016728	Chromosome_3A	16249	22	184	35.442181057295834	0.3635626959285768	87.76978417266187	183	0.9453551912568307	85.5211513301352	43	0.9069767441860465	88.34485835378095	140	0.9571428571428572	62.30841413825461	56	0.6071428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016727	Chromosome_3A	10342	13	156	36.48230516341133	0.45719823848468877	85.94295095423763	156	0.9166666666666666	77.75884107371112	38	0.8421052631578947	88.53899175564266	118	0.940677966101695	34.241531664212076	20	0.4	methylated (>=50%)	P55862	DNA replication licensing factor mcm5-A (xMCM5-A) (EC 3.6.4.12) (CDC46 homolog A) (xCDC46-A) (CDC46p) (p92)	cell cycle DNA replication [GO:0044786]; DNA replication initiation [GO:0006270]; double-strand break repair via break-induced replication [GO:0000727]; premeiotic DNA replication [GO:0006279]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN016726	Chromosome_3A	16106	13	197	33.639637402210354	0.4327184402463573	81.30371947972921	197	0.9086294416243654	75.82089552238806	21	0.8571428571428571	81.92597611586348	176	0.9147727272727273	68.96078431372548	64	0.71875	methylated (>=50%)	Q5U508	Tubulin-specific chaperone E (Tubulin-folding cofactor E)	cytoskeleton organization [GO:0007010]; post-chaperonin tubulin folding pathway [GO:0007023]	hit with GO BP
GN016725	Chromosome_3A	45441	20	648	33.57100415923945	0.5066766348614993	78.6456400742115	647	0.9273570324574961	69.54503249767873	43	0.7906976744186046	79.06851324531884	604	0.9370860927152318	72.23865877712032	55	0.8	methylated (>=50%)	O15033	Apoptosis-resistant E3 ubiquitin protein ligase 1 (EC 2.3.2.26) (Apoptosis-resistant HECT-type E3 ubiquitin transferase 1)	negative regulation of apoptotic process [GO:0043066]; protein K11-linked ubiquitination [GO:0070979]; protein K33-linked ubiquitination [GO:1990390]; protein ubiquitination [GO:0016567]; regulation of inflammatory response [GO:0050727]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN016724	Chromosome_3A	156	1	6	53.84615384615385	0.5777777777777777	0	6	0	0	6	0	NA	NA	NA	0.35737491877842753	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016723	Chromosome_3A	608	2	20	40.953947368421055	0.7851239669421488	0.7399577167019028	20	0	1.348747591522158	12	0	0	8	0	0.5553498704183636	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016722	Chromosome_3A	756	1	30	42.98941798941799	0.8624885914207484	0.6613756613756614	30	0	0.6613756613756614	30	0	NA	NA	NA	0.5142269454919438	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016717	Chromosome_3A	1926	1	28	38.7331256490135	0.3904855001629195	93.8970588235294	28	1	93.8970588235294	28	1	NA	NA	NA	94.05144694533762	29	1	methylated (>=50%)	Q6NSJ0	Alpha-galactosidase MYORG (EC 3.2.1.22) (Myogenesis regulating glycosidase) (Nuclear envelope transmembrane protein 37)	carbohydrate metabolic process [GO:0005975]; positive regulation of insulin-like growth factor receptor signaling pathway [GO:0043568]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN016716	Chromosome_3A	4970	2	82	34.989939637826964	0.5392238584792072	85.1899196493791	82	0.7560975609756098	52.6861451460886	39	0.48717948717948717	93.00113250283125	43	1	0.6728612624158924	56	0	methylated (>=50%)	Q2T9K6	Protein fem-1 homolog C (FEM1c) (FEM1-gamma)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN016715	Chromosome_3A	2010	1	62	41.492537313432834	0.7188509460083065	0.832408435072142	62	0	0.832408435072142	62	0	NA	NA	NA	1.1355034065102196	51	0	unmethylated (<10%)	H9JW43	Chitin deacetylase 8 (BmCDA8) (EC 3.5.1.41) (Chitin deacetylase 17)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN016714	Chromosome_3A	1539	1	17	38.07667316439246	0.3056675195401493	91.25728559533722	17	1	91.25728559533722	17	1	NA	NA	NA	78.45161290322581	30	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016713	Chromosome_3A	1697	2	63	41.42604596346494	0.8667850367271489	0.5048543689320388	63	0	0.5195843325339728	62	0	0	1	0	0.7446808510638298	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016712	Chromosome_3A	3143	6	103	35.25294304804327	1.0590072982194438	1.9249278152069298	103	0	0.38149737720553173	38	0	2.707275803722504	65	0	0.9243212016175621	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016711	Chromosome_3A	16369	7	314	35.536685197629666	0.6081961898000237	58.469143430910634	297	0.6026936026936027	57.061688311688314	26	0.6538461538461539	58.61715749039693	271	0.5977859778597786	84.56688596491227	48	1	methylated (>=50%)	Q9QXW2	F-box/WD repeat-containing protein 5 (F-box and WD-40 domain-containing protein 5)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic nuclear division [GO:0007088]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN016710	Chromosome_3A	1315	4	45	40.22813688212928	0.8504599022707675	0.30432136335970783	45	0	0.09950248756218906	28	0	0.6269592476489029	17	0	1.0370961308336657	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016709	Chromosome_3A	288	1	8	50.69444444444444	0.43636363636363634	1.2987012987012987	8	0	1.2987012987012987	8	0	NA	NA	NA	1.4155712841253791	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016708	Chromosome_3A	1592	2	0	51.88442211055276	0	NA	0	NA	NA	NA	NA	NA	NA	NA	23.1203007518797	8	0.25	NA	NA	NA	NA	no Swiss-Prot hit
GN016707	Chromosome_3A	4879	7	59	34.207829473252716	0.4137479518210826	76.82291666666667	59	0.7966101694915254	79.61595273264402	21	0.8571428571428571	75.30168946098149	38	0.7631578947368421	1.1428571428571428	53	0	methylated (>=50%)	F6RJC2	Cilia- and flagella-associated protein 161	cilium assembly [GO:0060271]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN016706	Chromosome_3A	11749	20	156	34.896586943569666	0.4382643827155623	91.8695831613702	154	0.9935064935064936	91.95876288659794	36	0.9722222222222222	91.84726522187823	118	1	53.35778781038375	48	0.6041666666666666	methylated (>=50%)	P00347	3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase) (EC 1.1.1.34)	cholesterol biosynthetic process via desmosterol [GO:0033489]; cholesterol biosynthetic process via lathosterol [GO:0033490]; coenzyme A metabolic process [GO:0015936]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; geranylgeranyl diphosphate biosynthetic process [GO:0033386]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]; negative regulation of amyloid-beta clearance [GO:1900222]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of protein secretion [GO:0050709]; zymosterol biosynthetic process [GO:0036197]	hit with GO BP
GN016705	Chromosome_3A	3688	5	52	38.55748373101952	0.37937508036517936	95.04814305364512	52	1	95.42203147353362	38	1	94.38058748403576	14	1	90.14373716632444	17	1	methylated (>=50%)	Q9BX70	BTB/POZ domain-containing protein 2	neurogenesis [GO:0022008]	hit with GO BP
GN016704	Chromosome_3A	808	2	8	38.73762376237624	0.2643762781186094	91.66666666666667	8	1	91.66666666666667	8	1	NA	NA	NA	88.13387423935092	40	0.975	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016703	Chromosome_3A	417	1	17	40.7673860911271	0.9978885135135135	6.8762278978389	17	0	6.8762278978389	17	0	NA	NA	NA	50.67126965861143	31	0.5161290322580645	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016702	Chromosome_3A	10344	8	118	37.28731631863882	0.32879617143629863	86.62711090826107	118	0.940677966101695	92.45960502692998	54	1	82.3389651531151	64	0.890625	84.72385428907168	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016701	Chromosome_3A	461	2	16	42.950108459869845	0.760333986186991	74.42922374429224	16	1	75.31645569620254	15	1	52	1	1	67.77777777777777	31	0.7741935483870968	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016700	Chromosome_3A	315	1	1	42.22222222222222	0.07126696832579185	62.06896551724138	1	1	62.06896551724138	1	1	NA	NA	NA	88.77697841726619	45	1	NA	NA	NA	NA	no Swiss-Prot hit
GN016785	Chromosome_3A	1850	2	56	39.13513513513514	0.7935049019607843	0.7689350249903883	56	0	0.8244023083264633	52	0	0	4	0	0.8569898232458489	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016786	Chromosome_3A	1920	1	71	41.5625	0.8704980842911877	0.3413940256045519	71	0	0.3413940256045519	71	0	NA	NA	NA	1.2603838441707247	55	0	unmethylated (<10%)	Q62318	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-A-interacting protein) (KRIP-1) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; convergent extension involved in axis elongation [GO:0060028]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; embryo implantation [GO:0007566]; embryonic placenta morphogenesis [GO:0060669]; epigenetic programming of gene expression [GO:0043045]; epithelial to mesenchymal transition [GO:0001837]; genomic imprinting [GO:0071514]; in utero embryonic development [GO:0001701]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of single stranded viral RNA replication via double stranded DNA intermediate [GO:0045869]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN016787	Chromosome_3A	36669	28	504	36.504949685020044	0.41300702520918936	86.74970471384087	464	0.9870689655172413	88.61088545897644	113	0.9823008849557522	86.22383400661036	351	0.9886039886039886	0.27803521779425394	36	0	methylated (>=50%)	P51587	Breast cancer type 2 susceptibility protein (Fanconi anemia group D1 protein)	cellular response to ionizing radiation [GO:0071479]; centrosome duplication [GO:0051298]; DNA damage response [GO:0006974]; DNA recombinase assembly [GO:0000730]; double-strand break repair [GO:0006302]; double-strand break repair involved in meiotic recombination [GO:1990918]; double-strand break repair via homologous recombination [GO:0000724]; establishment of protein localization to telomere [GO:0070200]; male meiosis I [GO:0007141]; mitotic recombination-dependent replication fork processing [GO:1990426]; negative regulation of mammary gland epithelial cell proliferation [GO:0033600]; nucleotide-excision repair [GO:0006289]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA damage checkpoint [GO:2000001]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN016788	Chromosome_3A	3620	7	82	37.09944751381215	0.661906694435649	1.234991423670669	67	0	0.7675438596491229	26	0	1.4478282576135797	41	0	0.8048289738430584	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016789	Chromosome_3A	2546	2	71	39.04163393558523	0.7320091518354289	0.6949524506217996	71	0	0.6949524506217996	71	0	NA	NA	NA	0.8113590263691683	57	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN016790	Chromosome_3A	2544	2	73	39.465408805031444	0.7371278875922839	0.1885369532428356	73	0	0.1885369532428356	73	0	NA	NA	NA	1.167181599725369	56	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN016791	Chromosome_3A	1854	2	41	41.42394822006472	0.5160944278856926	3.0364372469635628	22	0	3.171247357293869	20	0	0	2	0	3.1290743155149934	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016792	Chromosome_3A	723	1	21	39.695712309820195	0.7384009337613072	0.6459948320413437	21	0	0.6459948320413437	21	0	NA	NA	NA	0.6302521008403361	41	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN016793	Chromosome_3A	3810	2	111	37.034120734908136	0.8505422103518736	0.6820765441455097	111	0	0.9960159362549801	64	0	0.4892966360856269	47	0	0.6527947776417788	42	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN016794	Chromosome_3A	25719	19	404	33.98265873478751	0.5468979280992178	80.31119493466254	397	0.9118387909319899	75.1875	27	0.7037037037037037	80.60301865299729	370	0.927027027027027	0.56941431670282	84	0	methylated (>=50%)	A0A8M1PLI9	Alpha-aminoadipic semialdehyde dehydrogenase (Alpha-AASA dehydrogenase) (EC 1.2.1.31) (Aldehyde dehydrogenase family 7 member A1) (EC 1.2.1.3) (Betaine aldehyde dehydrogenase) (EC 1.2.1.8)	camera-type eye development [GO:0043010]; cartilage development [GO:0051216]; energy homeostasis [GO:0097009]; glycine betaine biosynthetic process from choline [GO:0019285]; L-lysine catabolic process [GO:0019477]; negative regulation of endosome to plasma membrane protein transport [GO:1905750]; negative regulation of ferroptosis [GO:0110076]; negative regulation of Golgi to plasma membrane protein transport [GO:0042997]; pectoral fin development [GO:0033339]	hit with GO BP
GN016795	Chromosome_3A	1692	1	66	41.96217494089834	0.9012420405297435	0.7100591715976331	66	0	0.7100591715976331	66	0	NA	NA	NA	0.544	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016796	Chromosome_3A	15623	17	181	39.10260513345708	0.30446190354165814	73.40114431023522	156	0.8269230769230769	71.70731707317073	53	0.8301886792452831	73.84738955823293	103	0.8252427184466019	55.177111716621255	11	0.6363636363636364	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016797	Chromosome_3A	801	3	4	35.2059925093633	0.16353613719885668	NA	0	NA	NA	NA	NA	NA	NA	NA	58.4136159280668	47	0.8936170212765957	NA	NA	NA	NA	no Swiss-Prot hit
GN016798	Chromosome_3A	2284	6	31	39.711033274956215	0.3460504579533347	66.14310645724258	31	0.7741935483870968	68.04979253112033	20	0.8	62.88416075650118	11	0.7272727272727273	61.28236744759556	12	0.5833333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016799	Chromosome_3A	15604	4	378	36.24711612407075	0.7379768867055204	2.0259503755975414	377	0	0.7863695937090432	46	0	2.1438364701483237	331	0	22.39737274220033	65	0.18461538461538463	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016800	Chromosome_3A	1101	1	37	44.9591280653951	0.6721611721611722	0.38910505836575876	23	0	0.38910505836575876	23	0	NA	NA	NA	0.471039776692254	53	0	unmethylated (<10%)	O02373	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; mesoderm migration involved in gastrulation [GO:0007509]; segment polarity determination [GO:0007367]; UDP-glucuronate biosynthetic process [GO:0006065]	hit with GO BP
GN016801	Chromosome_3A	697	3	11	37.01578192252511	0.4607295234661378	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9044958765629156	99	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016802	Chromosome_3A	18917	42	178	34.74652429032088	0.3150319567101981	73.59673642063912	176	0.8920454545454546	80.07575757575758	62	0.9354838709677419	70.83108763608925	114	0.868421052631579	0.8119434258774227	68	0	methylated (>=50%)	Q7XPJ0	Kinesin-like protein KIN-14I (Kinesin-like calmodulin-binding protein) (OsKCBP)	microtubule-based movement [GO:0007018]	hit with GO BP
GN016803	Chromosome_3A	13607	17	372	35.18777100022047	0.8863141630853192	1.9100546397048521	372	0	0.61175442429539	109	0	2.263007840342124	263	0	0.48616305160807777	47	0	unmethylated (<10%)	Q8BLI0	ADAMTS-like protein 1 (ADAMTSL-1) (Punctin-1)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN016804	Chromosome_3A	675	1	16	40.592592592592595	0.5761843790012804	3.736654804270463	16	0	3.736654804270463	16	0	NA	NA	NA	0.9995002498750625	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016805	Chromosome_3A	534	1	4	36.89138576779026	0.22084367245657568	0	1	0	0	1	0	NA	NA	NA	1.9347705914870095	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016806	Chromosome_3A	7540	13	198	38.793103448275865	0.7037593984962406	0.5907837731390311	198	0	0.45359385903698535	59	0	0.644718792866941	139	0	0.5249343832020997	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016807	Chromosome_3A	20627	9	215	32.93256411499491	0.3857157145839132	76.42054678875252	214	0.9018691588785047	84.1714756801319	18	1	75.75778936980122	196	0.8928571428571429	0.45219638242894056	61	0	methylated (>=50%)	Q8CEQ0	Cyclin-dependent kinase-like 1 (EC 2.7.11.22)	heart development [GO:0007507]; regulation of cilium assembly [GO:1902017]	hit with GO BP
GN016808	Chromosome_3A	27825	11	394	33.65678346810422	0.5000581566397778	85.2820612922116	388	0.9664948453608248	73.84105960264901	19	0.8421052631578947	85.84832220264678	369	0.9728997289972899	53.78787878787879	25	0.48	methylated (>=50%)	A4IIL4	BRO1 domain-containing protein BROX (BRO1 domain- and CAAX motif-containing protein)	mitotic nuclear membrane reassembly [GO:0007084]	hit with GO BP
GN016809	Chromosome_3A	2354	2	65	40.10195412064571	0.6899801587301587	0.4189108318372232	62	0	0.4286589099816289	61	0	0	1	0	1.6924564796905222	40	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016810	Chromosome_3A	2353	2	67	39.991500212494685	0.7142578832910474	0.6380510440835266	63	0	0.60790273556231	61	0	1.2658227848101267	2	0	0.5274725274725275	46	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN016811	Chromosome_3A	6003	11	201	38.64734299516908	0.8978241992262926	0.6150194216659474	201	0	0.9407665505226481	69	0	0.4688965301656768	132	0	0.74235807860262	39	0	unmethylated (<10%)	Q9BXJ7	Protein amnionless [Cleaved into: Soluble protein amnionless]	cobalamin metabolic process [GO:0009235]; cobalamin transport [GO:0015889]; Golgi to plasma membrane protein transport [GO:0043001]; intracellular protein localization [GO:0008104]; receptor-mediated endocytosis [GO:0006898]; renal protein absorption [GO:0097017]	hit with GO BP
GN016812	Chromosome_3A	856	2	26	35.39719626168224	0.9734931327092993	0.517464424320828	26	0	0.5677785663591199	24	0	0	2	0	0.501952035694367	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016813	Chromosome_3A	2392	4	50	40.008361204013376	0.5223574217555752	0.9026128266033254	50	0	1.1015911872705018	24	0	0.7763975155279503	26	0	0.9663703131039815	51	0	unmethylated (<10%)	B3EWZ3	Coadhesin	NA	hit, no GO BP
GN016814	Chromosome_3A	342	1	4	49.707602339181285	0.2105911330049261	0	4	0	0	4	0	NA	NA	NA	0.6988564167725541	68	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016815	Chromosome_3A	666	1	24	39.33933933933934	0.9327731092436975	0.5176876617773943	24	0	0.5176876617773943	24	0	NA	NA	NA	0.6484641638225256	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016816	Chromosome_3A	399	1	24	50.6265664160401	0.9395604395604396	0.4411764705882353	24	0	0.4411764705882353	24	0	NA	NA	NA	0.9238611022618668	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016817	Chromosome_3A	4526	4	138	38.06893504197967	0.8432401782098016	0.8441837172699957	138	0	0.33136966126656847	59	0	1.1701380762930025	79	0	0.6785714285714286	44	0	unmethylated (<10%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN016818	Chromosome_3A	2299	3	79	39.10395824271422	0.9073881633509527	0.550696469063816	79	0	0.5738332058148432	69	0	0.42283298097251587	10	0	0.7107952021323856	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016819	Chromosome_3A	2574	3	72	36.4024864024864	0.8446267432321575	1.2879484820607177	72	0	1.3078470824949697	67	0	1.075268817204301	5	0	0.9571788413098237	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016820	Chromosome_3A	5797	6	111	32.758323270657236	0.7201322828300916	78.68567454798331	110	0.8818181818181818	27.34225621414914	9	0.3333333333333333	81.99876619370758	101	0.9306930693069307	47.48717948717949	34	0.5588235294117647	methylated (>=50%)	Q3V0Q6	Sperm-associated antigen 8 (Sperm membrane protein 1) (SMP-1) (Sperm membrane protein BS-84)	flagellated sperm motility [GO:0030317]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN016821	Chromosome_3A	1696	2	61	41.33254716981132	0.8421326821326821	97.40184757505774	61	1	95.55895865237366	11	1	97.82995375311278	50	1	28.875607022786703	42	0.23809523809523808	methylated (>=50%)	Q8BGF9	Solute carrier family 25 member 44	branched-chain amino acid catabolic process [GO:0009083]; branched-chain amino acid transport [GO:0015803]; regulation of cold-induced thermogenesis [GO:0120161]	hit with GO BP
GN016831	Chromosome_3A	276	1	9	37.68115942028985	0.9703125	0.5882352941176471	9	0	0.5882352941176471	9	0	NA	NA	NA	0.5971337579617835	52	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN016832	Chromosome_3A	405	2	18	35.55555555555556	1.5115073605639644	0.42643923240938164	16	0	0.418848167539267	12	0	0.4424778761061947	4	0	0.6718528995756718	42	0	unmethylated (<10%)	P02597	Calmodulin, striated muscle	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN016833	Chromosome_3A	246	1	14	40.65040650406504	1.5827205882352942	0.5934718100890207	14	0	0.5934718100890207	14	0	NA	NA	NA	0.2881844380403458	39	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN016834	Chromosome_3A	681	2	19	38.32599118942731	0.8242451267677411	0.45045045045045046	19	0	0.5444646098003629	16	0	0	3	0	0.5311301268810859	63	0	unmethylated (<10%)	Q40302	Calmodulin (CaM)	NA	hit, no GO BP
GN016835	Chromosome_3A	429	1	3	37.52913752913753	0.20526315789473684	0.47393364928909953	3	0	0.47393364928909953	3	0	NA	NA	NA	8.105369807497468	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016836	Chromosome_3A	11037	10	261	33.18836640391411	0.8627583641519402	1.1142751021418844	260	0	0.49480455220188024	44	0	1.202858557984858	216	0	0.40144520272982737	48	0	unmethylated (<10%)	Q40302	Calmodulin (CaM)	NA	hit, no GO BP
GN016837	Chromosome_3A	213	1	10	44.60093896713615	1.0923076923076922	0.22371364653243847	10	0	0.22371364653243847	10	0	NA	NA	NA	0.2827140549273021	68	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN016838	Chromosome_3A	2431	5	61	33.11394487865076	0.9153426416305569	0.6126295947219604	61	0	0.5586592178770949	23	0	0.6456513482719332	38	0	0.5212858384013901	50	0	unmethylated (<10%)	Q40302	Calmodulin (CaM)	NA	hit, no GO BP
GN016839	Chromosome_3A	921	2	9	36.699239956568945	0.29522384870178436	80.94262295081967	9	0.8888888888888888	85.8044164037855	6	1	71.9298245614035	3	0.6666666666666666	81.50602409638554	23	0.9565217391304348	methylated (>=50%)	Q9W2H1	TM2 domain-containing protein biscotti (TM2D1)	positive regulation of Notch signaling pathway [GO:0045747]	hit with GO BP
GN016855	Chromosome_3A	1737	1	48	37.24812895797352	0.798528904723595	0.7268063274903805	48	0	0.7268063274903805	48	0	NA	NA	NA	0.8699855002416627	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016854	Chromosome_3A	363	1	8	49.586776859504134	0.37714285714285717	0	5	0	0	5	0	NA	NA	NA	1.411543287327478	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016853	Chromosome_3A	914	2	33	39.93435448577681	0.9067460317460317	0.4819277108433735	33	0	0.5628517823639775	30	0	0	3	0	0.550696469063816	47	0	unmethylated (<10%)	P09481	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of appetite [GO:0032098]; response to nicotine [GO:0035094]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN016852	Chromosome_3A	1017	1	33	40.0196656833825	0.8115146532546668	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q05901	Neuronal acetylcholine receptor subunit beta-3	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN016851	Chromosome_3A	10974	9	109	33.16019682886824	0.3628552135604079	89.53297348040365	108	1	89.84088127294982	12	1	89.50032446463335	96	1	91.93185470909675	32	1	methylated (>=50%)	P70099	DNA repair protein RAD51 homolog 1 (EC 3.6.4.-)	cellular response to camptothecin [GO:0072757]; cellular response to ionizing radiation [GO:0071479]; chromosome organization involved in meiotic cell cycle [GO:0070192]; DNA damage response [GO:0006974]; DNA recombinase assembly [GO:0000730]; DNA strand invasion [GO:0042148]; double-strand break repair involved in meiotic recombination [GO:1990918]; double-strand break repair via homologous recombination [GO:0000724]; interstrand cross-link repair [GO:0036297]; meiotic cell cycle [GO:0051321]; mitotic recombination-dependent replication fork processing [GO:1990426]; regulation of double-strand break repair via homologous recombination [GO:0010569]; telomere maintenance via recombination [GO:0000722]; telomere maintenance via telomere lengthening [GO:0010833]	hit with GO BP
GN016850	Chromosome_3A	5139	2	51	34.30628526950769	0.33868191509982554	69.75920679886686	51	0.8431372549019608	76.10681658468026	33	0.9090909090909091	63.31192005710207	18	0.7222222222222222	63.89301634472511	15	0.8	methylated (>=50%)	Q24212	Protein stoned-B (Stn-B) (StonedB)	chemical synaptic transmission [GO:0007268]; clathrin-dependent endocytosis [GO:0072583]; regulation of endocytosis [GO:0030100]; regulation of synaptic vesicle endocytosis [GO:1900242]; synaptic vesicle cycle [GO:0099504]; synaptic vesicle endocytosis [GO:0048488]; synaptic vesicle transport [GO:0048489]	hit with GO BP
GN016849	Chromosome_3A	19766	7	234	34.14954973186279	0.40700644206610737	73.98004815961473	228	0.793859649122807	42.8341384863124	13	0.6923076923076923	75.37013080350727	215	0.8	23.462897526501767	22	0.3181818181818182	methylated (>=50%)	Q3ZCK3	3'(2'),5'-bisphosphate nucleotidase 1 (EC 3.1.3.7) (3'-phosphoadenosine 5'-phosphate phosphatase) (PAP phosphatase) (Bisphosphate 3'-nucleotidase 1) (BPntase 1) (Inositol-polyphosphate 1-phosphatase) (EC 3.1.3.57)	phosphatidylinositol phosphate biosynthetic process [GO:0046854]	hit with GO BP
GN016848	Chromosome_3A	16264	20	142	34.745450073782585	0.291431135581611	78.88793288879329	142	0.9154929577464789	79.92926613616268	41	0.9024390243902439	78.55315520181921	101	0.9207920792079208	61.583091587235806	58	0.6206896551724138	methylated (>=50%)	Q9EQC5	N-terminal kinase-like protein (105 kDa kinase-like protein) (Mitosis-associated kinase-like protein NTKL) (SCY1-like protein 1)	inflammatory response [GO:0006954]; intracellular protein localization [GO:0008104]; neuron development [GO:0048666]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; spinal cord motor neuron differentiation [GO:0021522]	hit with GO BP
GN016847	Chromosome_3A	17795	26	164	35.00983422309638	0.30305768021380336	71.34442492508009	163	0.8220858895705522	63.92896781354051	51	0.7450980392156863	74.21852595354173	112	0.8571428571428571	68.95125553914328	43	0.7906976744186046	methylated (>=50%)	Q6P158	Putative ATP-dependent RNA helicase DHX57 (EC 3.6.4.13) (DEAH box protein 57)	positive regulation of translation [GO:0045727]	hit with GO BP
GN016846	Chromosome_3A	10330	9	147	32.14908034849952	0.5508825671938078	75.74463860206514	147	0.9047619047619048	83.1275720164609	14	1	75.16857540404581	133	0.8947368421052632	90.3405572755418	33	0.9696969696969697	methylated (>=50%)	P38584	Tubulin--tyrosine ligase (TTL) (EC 6.3.2.25)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN016845	Chromosome_3A	786	1	21	40.458015267175576	0.6681238615664845	0.6932409012131716	21	0	0.6932409012131716	21	0	NA	NA	NA	0.6215243702976775	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016844	Chromosome_3A	1603	4	44	35.55832813474735	0.8718310033250516	1.0573403822692151	44	0	1.169188445667125	28	0	0.8955223880597015	16	0	0.6404782237403929	52	0	unmethylated (<10%)	Q96JK4	HHIP-like protein 1	NA	hit, no GO BP
GN016843	Chromosome_3A	3876	5	104	35.939112487100104	0.8310463121783876	1.0508182601205858	104	0	1.2840267077555214	46	0	0.9331259720062208	58	0	0.7489514679448772	58	0	unmethylated (<10%)	B1AS29	Glutamate receptor ionotropic, kainate 3 (GluK3) (Glutamate receptor 7) (GluR-7) (GluR7)	G protein-coupled glutamate receptor signaling pathway [GO:0007216]; glutamate receptor signaling pathway [GO:0007215]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; regulation of membrane potential [GO:0042391]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN016842	Chromosome_3A	643	2	19	34.68118195956454	0.9898719818505914	0.4591368227731864	19	0	0.1358695652173913	14	0	1.13314447592068	5	0	0.45126353790613716	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016841	Chromosome_3A	5877	3	68	34.26918495831207	0.39427076345095935	84.49154269411045	67	0.9701492537313433	93.1840311587147	18	1	82.19072164948453	49	0.9591836734693877	32.774116237267826	33	0.3939393939393939	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016840	Chromosome_3A	13634	8	351	36.33563150946164	0.7803016764586181	0.9819301609435825	350	0	1.051156271899089	37	0	0.9756715661429296	313	0	0.48364153627311524	60	0	unmethylated (<10%)	Q5R5L7	Arrestin domain-containing protein 3	protein transport [GO:0015031]	hit with GO BP
GN016856	Chromosome_3A	2799	5	72	35.29832082886745	0.8365628891656289	0.3239241092086997	72	0	0.2677376171352075	32	0	0.3536067892503536	40	0	0.8724100327153762	49	0	unmethylated (<10%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN016857	Chromosome_3A	4280	6	116	35.30373831775701	0.8701046971773473	0.5451076587626056	116	0	0.5649717514124294	33	0	0.5403579871664979	83	0	0.6335282651072125	35	0	unmethylated (<10%)	Q7TPQ9	Arrestin domain-containing protein 3	fat pad development [GO:0060613]; negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071878]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of heat generation [GO:0031651]; negative regulation of locomotion involved in locomotory behavior [GO:0090327]; positive regulation of hippo signaling [GO:0035332]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; response to mechanical stimulus [GO:0009612]; skin development [GO:0043588]; temperature homeostasis [GO:0001659]	hit with GO BP
GN016858	Chromosome_3A	4864	8	126	35.64967105263158	0.8157076536479407	0.6666666666666666	126	0	0.6957621758380772	37	0	0.6572191415074964	89	0	1.0360138135175136	39	0	unmethylated (<10%)	Q7TPQ9	Arrestin domain-containing protein 3	fat pad development [GO:0060613]; negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071878]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of heat generation [GO:0031651]; negative regulation of locomotion involved in locomotory behavior [GO:0090327]; positive regulation of hippo signaling [GO:0035332]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; response to mechanical stimulus [GO:0009612]; skin development [GO:0043588]; temperature homeostasis [GO:0001659]	hit with GO BP
GN016859	Chromosome_3A	25708	9	659	35.82153415279291	0.7993792409999146	3.156136775362319	655	0	0.5945303210463734	39	0	3.2841942578612615	616	0	0.8163265306122449	24	0	unmethylated (<10%)	Q5R5L7	Arrestin domain-containing protein 3	protein transport [GO:0015031]	hit with GO BP
GN016860	Chromosome_3A	2585	4	60	34.39071566731141	0.7863596264411523	0.5035971223021583	60	0	0.4294149221685454	31	0	0.5635023840485479	29	0	0.9212730318257957	55	0	unmethylated (<10%)	Q9V4X2	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)	defense response to Gram-positive bacterium [GO:0050830]; immune response [GO:0006955]; innate immune response [GO:0045087]; negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria [GO:0002814]; negative regulation of peptidoglycan recognition protein signaling pathway [GO:0061060]; peptidoglycan catabolic process [GO:0009253]; Toll receptor ligand protein activation cascade [GO:0160032]	hit with GO BP
GN016861	Chromosome_3A	4699	7	157	38.49755267078102	0.9039417256843189	0.9397528321318228	157	0	0.814663951120163	88	0	1.1048074051955807	69	0	0.5461993627674101	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016862	Chromosome_3A	9804	13	134	35.607915136678905	0.4316913279640382	87.72340070151996	134	1	81.09965635738831	6	1	88.06179775280899	128	1	41.019955654102	22	0.36363636363636365	methylated (>=50%)	Q9NP81	Serine--tRNA ligase, mitochondrial (EC 6.1.1.11) (SerRSmt) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)	mitochondrial seryl-tRNA aminoacylation [GO:0070158]; seryl-tRNA aminoacylation [GO:0006434]	hit with GO BP
GN016863	Chromosome_3A	1889	2	19	39.91529910005294	0.2525685413499972	87.65133171912834	19	0.9473684210526315	88.13314037626628	17	0.9411764705882353	85.18518518518519	2	1	18.095238095238095	17	0.17647058823529413	methylated (>=50%)	Q6GLJ1	BTB/POZ domain-containing protein 17	NA	hit, no GO BP
GN016864	Chromosome_3A	11600	22	127	34.827586206896555	0.36806453071647416	83.00018857250613	127	0.8582677165354331	60.833333333333336	48	0.6458333333333334	91.74336050486458	79	0.9873417721518988	69.75409836065573	17	0.8235294117647058	methylated (>=50%)	P36776	Lon protease homolog, mitochondrial (EC 3.4.21.53) (LONHs) (Lon protease-like protein) (LONP) (Mitochondrial ATP-dependent protease Lon) (Mitochondrial chaperone LONP1) (EC 3.6.4.10) (Serine protease 15)	'de novo' protein folding [GO:0006458]; cellular response to oxidative stress [GO:0034599]; chaperone-mediated protein complex assembly [GO:0051131]; mitochondrial protein catabolic process [GO:0035694]; mitochondrion organization [GO:0007005]; oxidation-dependent protein catabolic process [GO:0070407]; protein catabolic process [GO:0030163]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; proteolysis [GO:0006508]; response to aluminum ion [GO:0010044]; response to hormone [GO:0009725]; response to hypoxia [GO:0001666]	hit with GO BP
GN016865	Chromosome_3A	13621	4	364	36.083987959768	0.8217588134425157	0.7550676656792705	363	0	0.8918617614269788	46	0	0.7391558062633728	317	0	0.5537974683544303	35	0	unmethylated (<10%)	Q9H2B2	Synaptotagmin-4 (Synaptotagmin IV) (SytIV)	calcium-dependent activation of synaptic vesicle fusion [GO:0099502]; dense core granule cytoskeletal transport [GO:0099519]; memory [GO:0007613]; negative regulation of calcium ion-dependent exocytosis [GO:0045955]; negative regulation of catecholamine secretion [GO:0033604]; negative regulation of protein secretion [GO:0050709]; negative regulation of retrograde trans-synaptic signaling by neuropeptide [GO:1905433]; negative regulation of short-term neuronal synaptic plasticity [GO:0048174]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; positive regulation of calcium ion-dependent exocytosis [GO:0045956]; positive regulation of dendrite extension [GO:1903861]; positive regulation of dense core granule exocytosis [GO:1905415]; positive regulation of glutamate secretion [GO:0014049]; regulation of calcium ion-dependent exocytosis [GO:0017158]; regulation of dopamine secretion [GO:0014059]; regulation of endocytosis [GO:0030100]; regulation of postsynaptic dense core vesicle exocytosis [GO:0150044]; regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission [GO:0150035]; vesicle fusion [GO:0006906]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN016877	Chromosome_3A	3963	9	116	38.2033812768105	0.8033131503761369	0.7751937984496124	53	0	0.9345794392523364	36	0	0.5128205128205128	17	0	0.6868131868131868	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016876	Chromosome_3A	8188	11	204	36.040547142159255	0.7675869028559245	0.5599104143337066	135	0	0.38880248833592534	43	0	0.6291286568103177	92	0	0.6416131989000916	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016875	Chromosome_3A	1075	5	22	34.51162790697674	0.6887413361290698	0.8113590263691683	22	0	0.7712082262210797	18	0	0.9615384615384616	4	0	0.28376844494892167	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016874	Chromosome_3A	5890	8	153	35.07640067911715	0.8445196236458372	0.562429696287964	132	0	0.5012531328320802	44	0	0.5849753694581281	88	0	0.2609452015076834	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016893	Chromosome_3A	5862	8	153	35.05629477993859	0.8495652173913043	2.7586206896551726	19	0	NA	NA	NA	2.7586206896551726	19	0	2.7777777777777777	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016892	Chromosome_3A	7263	8	170	35.453669282665565	0.7451685442082279	0.7142857142857143	9	0	0.7142857142857143	9	0	NA	NA	NA	0	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016891	Chromosome_3A	6779	14	160	35.698480601858684	0.7423021330646927	0.5405405405405406	20	0	0.4608294930875576	12	0	0.6535947712418301	8	0	0	1	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016890	Chromosome_3A	300	1	6	43.333333333333336	0.43636363636363634	NA	0	NA	NA	NA	NA	NA	NA	NA	38.095238095238095	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016889	Chromosome_3A	12800	26	141	36.8125	0.3257808777022051	43.57142857142857	8	0.375	41.97530864197531	4	0.5	45.76271186440678	4	0.25	NA	NA	NA	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016899	Chromosome_3A	7878	18	72	37.8014724549378	0.25704066266766423	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018681	Chromosome_3A	210	1	2	43.80952380952381	0.19848771266540643	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018680	Chromosome_3A	3521	8	29	36.46691280886112	0.24901718823162167	50.892857142857146	4	0.5	50.892857142857146	4	0.5	NA	NA	NA	71.77541729893778	20	0.85	NA	NA	NA	NA	no Swiss-Prot hit
GN016895	Chromosome_3A	1219	3	14	33.79819524200164	0.4049161268892211	57.615894039735096	13	0.6153846153846154	77.27272727272727	7	0.7142857142857143	44.47513812154696	6	0.5	51.603053435114504	15	0.6	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016894	Chromosome_3A	6978	14	52	34.85239323588421	0.2477285947190339	55.6298773690078	28	0.75	59.197324414715716	19	0.7894736842105263	48.49498327759197	9	0.6666666666666666	79.06976744186046	3	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018682	Chromosome_3A	1214	3	15	33.93739703459637	0.43205922129688945	60.33755274261603	15	0.6	70.44673539518901	8	0.75	44.26229508196721	7	0.42857142857142855	49.12280701754386	6	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018683	Chromosome_3A	3140	7	24	36.17834394904459	0.23548307465400925	51.95652173913044	19	0.631578947368421	57.18157181571816	16	0.75	30.76923076923077	3	0	59.77859778597786	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018684	Chromosome_3A	210	1	2	44.285714285714285	0.1942645698427382	72.72727272727273	1	1	72.72727272727273	1	1	NA	NA	NA	59.01898734177215	12	0.4166666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN016896	Chromosome_3A	8658	17	58	34.673134673134676	0.22315454360024478	70.50359712230215	34	0.9117647058823529	73.71007371007371	19	0.9473684210526315	67.44730679156909	15	0.8666666666666667	41.87192118226601	7	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016897	Chromosome_3A	2388	7	14	33.584589614740366	0.20907936785886266	51.059322033898304	14	0.5	56.43939393939394	8	0.625	44.23076923076923	6	0.3333333333333333	50	8	0.625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016898	Chromosome_3A	11609	28	146	35.15376001378241	0.40816614529525513	66.62030598052851	89	0.7865168539325843	73.51413733410271	48	0.8958333333333334	60.204081632653065	41	0.6585365853658537	51.372549019607845	11	0.7272727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018685	Chromosome_3A	1180	3	13	36.440677966101696	0.3364035087719298	NA	0	NA	NA	NA	NA	NA	NA	NA	62	5	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN018688	Chromosome_3A	546	2	7	41.94139194139194	0.3122549019607843	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018687	Chromosome_3A	4577	9	31	35.26327288616998	0.21881284313120722	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016900	Chromosome_3A	738	3	14	37.262872628726285	0.5465509944985188	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016888	Chromosome_3A	7215	17	67	37.7962577962578	0.26127147197981626	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016902	Chromosome_3A	546	2	7	41.94139194139194	0.3122549019607843	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016901	Chromosome_3A	1180	3	13	36.440677966101696	0.3364035087719298	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016887	Chromosome_3A	595	2	7	38.319327731092436	0.32058189655172414	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016886	Chromosome_3A	4406	8	53	36.79073990013618	0.35620170292474734	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016885	Chromosome_3A	1713	5	8	33.62521891418564	0.1661030507981528	64.70588235294117	5	0.8	66.66666666666667	4	0.75	57.142857142857146	1	1	66.16766467065868	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016884	Chromosome_3A	1012	4	6	36.16600790513834	0.18598382749326145	53.95348837209303	6	0.5	53.982300884955755	3	0.6666666666666666	53.92156862745098	3	0.3333333333333333	58.8235294117647	1	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016883	Chromosome_3A	12580	28	168	35.087440381558025	0.4350975924739876	68.55269967224426	125	0.792	63.05869682283252	46	0.6956521739130435	71.142131979695435	79	0.8481012658227848	55.78231292517007	14	0.6428571428571429	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016882	Chromosome_3A	18197	30	180	36.412595482771884	0.3002276826961151	14.814814814814815	2	0	NA	NA	NA	14.814814814814815	2	0	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018686	Chromosome_3A	546	2	7	41.57509157509158	0.31665285832642914	68.18181818181819	7	1	68.18181818181819	7	1	NA	NA	NA	77.82462057335582	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018689	Chromosome_3A	10568	22	83	36.411809235427704	0.23881666574096158	NA	0	NA	NA	NA	NA	NA	NA	NA	49.058084772370485	23	0.5217391304347826	NA	NA	NA	NA	no Swiss-Prot hit
GN018690	Chromosome_3A	738	3	15	37.53387533875339	0.5772841051314143	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016881	Chromosome_3A	16636	29	153	37.03414282279394	0.2683728262849971	34.375	1	0	NA	NA	NA	34.375	1	0	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016913	Chromosome_3A	4314	6	54	36.254056560037085	0.38116836261357445	90.53540587219344	54	1	89.49652777777777	28	1	91.22203098106712	26	1	77.11442786069652	8	0.875	methylated (>=50%)	A8VU90	Structure-specific endonuclease ANKLE1 (Ankyrin repeat and LEM domain-containing protein 1) (EC 3.1.-.-) (Ankyrin repeat domain-containing protein 41) (LEM-domain containing protein 3)	DNA damage response [GO:0006974]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of mitotic recombination [GO:0045950]; protein export from nucleus [GO:0006611]; regulation of lymphoid progenitor cell differentiation [GO:1905456]; regulation of myeloid progenitor cell differentiation [GO:1905453]; resolution of meiotic recombination intermediates [GO:0000712]	hit with GO BP
GN016912	Chromosome_3A	2286	3	20	32.58967629046369	0.3309302527577521	74.1732283464567	17	0.6470588235294118	37.18411552346571	5	0.4	84.49144008056395	12	0.75	14.022140221402214	18	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002030	Chromosome_3A	1727	2	29	35.437174290677476	0.535234899328859	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016911	Chromosome_3A	1065	1	9	37.46478873239437	0.2534373347435219	82.9192546583851	9	1	82.9192546583851	9	1	NA	NA	NA	89.62264150943396	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016910	Chromosome_3A	1159	2	16	38.48144952545298	0.37398406776242815	86.9894099848714	16	0.9375	69.54545454545455	7	0.8571428571428571	95.69160997732426	9	1	19.288793103448278	34	0.11764705882352941	methylated (>=50%)	Q5U419	Solute carrier family 33 member 2 (Major facilitator superfamily domain-containing protein 3)	NA	hit, no GO BP
GN016909	Chromosome_3A	4849	7	52	33.2027222107651	0.38914070445597804	77.58665624185562	52	0.8269230769230769	81.16666666666667	10	0.9	76.92307692307692	42	0.8095238095238095	45.25881814017407	55	0.4909090909090909	methylated (>=50%)	P47802	Metaxin-1 (Mitochondrial outer membrane import complex protein 1)	mitochondrial outer membrane translocase complex assembly [GO:0070096]; protein insertion into mitochondrial outer membrane [GO:0045040]	hit with GO BP
GN016908	Chromosome_3A	21109	20	334	35.88516746411483	0.4922606420971302	91.06243582848482	327	1	92.95019157088123	72	1	90.61555206191801	255	1	91.15270097830711	29	1	methylated (>=50%)	Q3T8J9	GON-4-like protein (GON-4 homolog) (Yin Yang 1-associated-related protein)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN016907	Chromosome_3A	1227	1	25	41.646291768541154	0.47186500123061775	94.59074733096085	25	1	94.59074733096085	25	1	NA	NA	NA	73.1811697574893	23	0.8695652173913043	methylated (>=50%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN016906	Chromosome_3A	7474	7	109	35.97805726518598	0.4520201655904361	71.1706102117061	108	0.7870370370370371	89.3136403127715	31	1	67.21031670775649	77	0.7012987012987013	87.41935483870968	13	1	methylated (>=50%)	Q3T8J9	GON-4-like protein (GON-4 homolog) (Yin Yang 1-associated-related protein)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN016905	Chromosome_3A	4115	4	108	36.54921020656136	0.7873086734693877	0.42294028083234647	103	0	0.5388760585065435	29	0	0.39028620988725066	74	0	0.7947477539737388	54	0	unmethylated (<10%)	P24367	Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) (S-cyclophilin) (SCYLP)	negative regulation of collagen fibril organization [GO:1904027]; protein folding [GO:0006457]	hit with GO BP
GN016904	Chromosome_3A	480	1	23	43.125	1.0574712643678161	0.4419889502762431	23	0	0.4419889502762431	23	0	NA	NA	NA	0.7783543365455893	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016903	Chromosome_3A	4386	3	156	37.07250341997264	1.0353966632618319	0.5571030640668524	156	0	0.6243213897937026	102	0	0.49286640726329445	54	0	0.5750798722044729	60	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN016927	Chromosome_3A	453	2	11	39.95584988962472	0.6126137201868699	0	11	0	0	9	0	0	2	0	1.2007684918347743	44	0	unmethylated (<10%)	O14522	Receptor-type tyrosine-protein phosphatase T (R-PTP-T) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase rho) (RPTP-rho)	cell adhesion [GO:0007155]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to interleukin-6 [GO:0071354]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell migration [GO:0030336]; negative regulation of receptor signaling pathway via STAT [GO:1904893]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]	hit with GO BP
GN016926	Chromosome_3A	18026	6	321	35.01054033063353	0.5817248386880788	77.69287521079258	312	0.75	68.88888888888889	13	0.6923076923076923	78.01759466695809	299	0.7525083612040134	0.6599788806758183	84	0	methylated (>=50%)	A0A250YGJ5	NAD-dependent protein deacylase sirtuin-6 (EC 2.3.1.-) (NAD-dependent protein deacetylase sirtuin-6) (EC 2.3.1.286) (Protein mono-ADP-ribosyltransferase sirtuin-6) (EC 2.4.2.-)	cardiac muscle cell differentiation [GO:0055007]; circadian regulation of gene expression [GO:0032922]; determination of adult lifespan [GO:0008340]; double-strand break repair [GO:0006302]; ketone biosynthetic process [GO:0042181]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of glycolytic process [GO:0045820]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; pericentric heterochromatin formation [GO:0031508]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of insulin secretion [GO:0032024]; positive regulation of protein export from nucleus [GO:0046827]; positive regulation of protein localization to chromatin [GO:0120187]; positive regulation of stem cell differentiation [GO:2000738]; protein delipidation [GO:0051697]; protein destabilization [GO:0031648]; regulation of circadian rhythm [GO:0042752]; regulation of double-strand break repair via homologous recombination [GO:0010569]; regulation of lipid catabolic process [GO:0050994]; regulation of lipid metabolic process [GO:0019216]; transposable element silencing [GO:0010526]	hit with GO BP
GN016925	Chromosome_3A	7216	2	192	37.6940133037694	0.7559731543624161	0.8890884598114055	192	0	0.9061784897025171	189	0	0	3	0	1.8153526970954357	45	0	unmethylated (<10%)	Q9P2E3	NFX1-type zinc finger-containing protein 1 (ATP- dependent RNA translocase ZNFX1) (EC 3.6.4.-) (E3 ubiquitin-protein and -ssRNA ligase ZNFX1) (EC 2.3.2.27)	activation of innate immune response [GO:0002218]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; negative regulation of viral genome replication [GO:0045071]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN016924	Chromosome_3A	7626	3	195	37.84421715184894	0.7294679402404041	0.8146849541095184	195	0	0.8026388125343595	187	0	0.9966777408637874	8	0	0.8216364258815474	47	0	unmethylated (<10%)	Q9P2E3	NFX1-type zinc finger-containing protein 1 (ATP- dependent RNA translocase ZNFX1) (EC 3.6.4.-) (E3 ubiquitin-protein and -ssRNA ligase ZNFX1) (EC 2.3.2.27)	activation of innate immune response [GO:0002218]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; negative regulation of viral genome replication [GO:0045071]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN016923	Chromosome_3A	13554	6	165	31.282278294230487	0.5000032418237293	42.65626339706765	162	0.38271604938271603	46.90150032615786	51	0.4117647058823529	41.14225892753286	111	0.36936936936936937	3.5165723524656425	84	0	sparse (10-50%)	A7FH13	N-methyl-L-tryptophan oxidase (MTOX) (EC 1.5.3.-)	NA	hit, no GO BP
GN016917	Chromosome_3A	16862	7	439	36.069268176965956	0.8041521980131979	1.1912398057362779	404	0	0.43541364296081275	60	0	1.2703072017814667	344	0	0.42334442092530994	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016916	Chromosome_3A	1092	1	41	41.11721611721612	0.8896041964711493	0.6064690026954178	41	0	0.6064690026954178	41	0	NA	NA	NA	0.22349936143039592	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016915	Chromosome_3A	393	2	14	43.00254452926209	0.7712363330529857	NA	0	NA	NA	NA	NA	NA	NA	NA	1.5429122468659595	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016928	Chromosome_3A	246	1	12	48.3739837398374	0.841025641025641	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016914	Chromosome_3A	246	1	12	48.3739837398374	0.841025641025641	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016929	Chromosome_3A	15660	17	147	33.569604086845466	0.3350826767836884	80.23653906006847	147	0.9523809523809523	79.13593256059009	33	0.9696969696969697	80.506394522671485	114	0.9473684210526315	55.50986842105263	33	0.696969696969697	methylated (>=50%)	Q3UMB5	Guanine nucleotide exchange protein SMCR8 (Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog)	negative regulation of autophagosome assembly [GO:1902902]; negative regulation of exocytosis [GO:0045920]; negative regulation of gene expression [GO:0010629]; negative regulation of immune response [GO:0050777]; negative regulation of macroautophagy [GO:0016242]; positive regulation of autophagosome maturation [GO:1901098]; positive regulation of TOR signaling [GO:0032008]; regulation of autophagy [GO:0010506]; regulation of TORC1 signaling [GO:1903432]	hit with GO BP
GN016930	Chromosome_3A	315	1	13	44.76190476190476	0.8506439551308683	0.5217391304347826	13	0	0.5217391304347826	13	0	NA	NA	NA	0.5992010652463382	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016931	Chromosome_3A	1440	1	18	43.263888888888886	0.2734869587237275	0.49261083743842365	11	0	0.49261083743842365	11	0	NA	NA	NA	0.5869074492099323	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016932	Chromosome_3A	1282	2	51	40.17160686427457	0.9871365159887671	0.5394470667565745	51	0	0.5213555243633446	44	0	0.6349206349206349	7	0	0.7863401482812851	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016933	Chromosome_3A	3135	2	69	33.23763955342903	0.7987526586316909	0.5159958720330238	69	0	0.625	9	0	0.5061867266591676	60	0	0.40801186943620177	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016934	Chromosome_3A	21811	8	483	36.1285589839989	0.6798617213289951	0.7529052321457799	448	0	0.6486301954425194	306	0	0.9376890502117362	142	0	4.195804195804196	13	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN016935	Chromosome_3A	528	1	5	36.36363636363637	0.2968960863697706	30.602782071097373	5	0	30.602782071097373	5	0	NA	NA	NA	14.642857142857142	18	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016936	Chromosome_3A	36427	8	758	36.283525956021634	0.6323529149069224	1.9897178289706055	617	0.0032414910858995136	1.2372571229415352	259	0	2.6063981719508713	358	0.00558659217877095	7.156488549618321	48	0	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN016937	Chromosome_3A	219	1	10	42.009132420091326	1.067251461988304	0.3816793893129771	10	0	0.3816793893129771	10	0	NA	NA	NA	0.3762227238525207	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016938	Chromosome_3A	1520	2	41	36.51315789473684	0.8104452767374116	0.8130081300813008	41	0	1.2139605462822458	14	0	0.6430868167202572	27	0	0.7507507507507507	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016939	Chromosome_3A	4356	1	99	36.77685950413223	0.6736534943771606	0.6624710168930109	86	0	0.6624710168930109	86	0	NA	NA	NA	0.990952175786299	63	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN016940	Chromosome_3A	15127	7	310	35.67131618959476	0.6452678654849936	1.0451469202432966	288	0	0.9972930616896993	184	0	1.1173184357541899	104	0	3.7209302325581395	16	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN016955	Chromosome_3A	1101	1	23	38.87375113533152	0.556060606060606	0.4835589941972921	23	0	0.4835589941972921	23	0	NA	NA	NA	0.9700176366843033	36	0	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN016954	Chromosome_3A	9345	2	195	36.43659711075441	0.6306789747025838	1.4635124298315958	195	0	1.5567439096850861	175	0	0.9609224855861627	20	0	0.778816199376947	17	0	unmethylated (<10%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN016953	Chromosome_3A	4547	2	105	38.22300417857928	0.6323935546680972	1.8578526679628429	105	0.009523809523809525	1.1804384485666104	61	0	3.0649038461538463	44	0.022727272727272728	4.862907397827212	47	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN017766	Chromosome_3A	2111	5	14	31.31217432496447	0.27083944281524924	29.421487603305785	8	0.25	32.467532467532465	6	0.3333333333333333	24.09090909090909	2	0	19.440598172251455	68	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016952	Chromosome_3A	13395	4	284	36.60321015304218	0.6338736445010231	77.02497417512305	282	0.9326241134751773	75.50828165476096	234	0.9188034188034188	82.22162452931684	48	1	77.67527675276753	24	0.875	methylated (>=50%)	Q9JLC8	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]	hit with GO BP
GN016951	Chromosome_3A	6848	7	64	35.51401869158879	0.2987555487691821	85.64789502460361	63	0.9841269841269841	84.34959349593495	34	0.9705882352941176	87.15976331360947	29	1	75.51724137931035	10	0.8	methylated (>=50%)	Q80XC6	Nuclear exosome regulator NRDE2 (Protein NRDE2 homolog)	DNA damage response [GO:0006974]; mitotic cell cycle [GO:0000278]; mRNA stabilization [GO:0048255]; negative regulation of RNA catabolic process [GO:1902369]; positive regulation of RNA export from nucleus [GO:0046833]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]; RNA splicing [GO:0008380]	hit with GO BP
GN016950	Chromosome_3A	2350	4	33	35.87234042553192	0.43743865705486173	51.053639846743295	33	0.5454545454545454	31.32387706855792	16	0.4375	64.4927536231884	17	0.6470588235294118	36.52258377853327	36	0.5555555555555556	methylated (>=50%)	Q4KMC9	Uncharacterized protein C1orf198 homolog	NA	hit, no GO BP
GN016949	Chromosome_3A	10752	10	79	33.249627976190474	0.2666854209156762	80.34489515970998	79	0.8227848101265823	62.90630975143404	11	0.5454545454545454	82.33624454148472	68	0.8676470588235294	23.222748815165875	25	0.16	methylated (>=50%)	Q96BJ3	Axin interactor, dorsalization-associated protein (Axin interaction partner and dorsalization antagonist)	determination of ventral identity [GO:0048264]; dorsal/ventral pattern formation [GO:0009953]; negative regulation of JNK cascade [GO:0046329]; negative regulation of JUN kinase activity [GO:0043508]; negative regulation of protein-containing complex assembly [GO:0031333]	hit with GO BP
GN016948	Chromosome_3A	24850	24	266	33.83098591549296	0.37501228274295606	86.22191533436023	265	0.9622641509433962	93.41736694677871	53	0.9811320754716981	84.93519504101184	212	0.9575471698113207	26.70391061452514	37	0.1891891891891892	methylated (>=50%)	Q07889	Son of sevenless homolog 1 (SOS-1)	axon guidance [GO:0007411]; B cell receptor signaling pathway [GO:0050853]; cytokine-mediated signaling pathway [GO:0019221]; epidermal growth factor receptor signaling pathway [GO:0007173]; Fc-epsilon receptor signaling pathway [GO:0038095]; insulin receptor signaling pathway [GO:0008286]; insulin-like growth factor receptor signaling pathway [GO:0048009]; leukocyte migration [GO:0050900]; myelination [GO:0042552]; neurotrophin TRK receptor signaling pathway [GO:0048011]; positive regulation of epidermal growth factor receptor signaling pathway [GO:0045742]; positive regulation of Rac protein signal transduction [GO:0035022]; Ras protein signal transduction [GO:0007265]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]; response to ischemia [GO:0002931]; Schwann cell development [GO:0014044]; signal transduction [GO:0007165]; T cell activation [GO:0042110]	hit with GO BP
GN016947	Chromosome_3A	7399	6	74	35.139883768076764	0.3241411850512592	74.59677419354838	61	0.6721311475409836	90.28571428571429	3	1	73.82228490832158	58	0.6551724137931034	2.4702653247941444	58	0.017241379310344827	methylated (>=50%)	P30044	Peroxiredoxin-5, mitochondrial (EC 1.11.1.24) (Alu corepressor 1) (Antioxidant enzyme B166) (AOEB166) (Liver tissue 2D-page spot 71B) (PLP) (Peroxiredoxin V) (Prx-V) (Peroxisomal antioxidant enzyme) (TPx type VI) (Thioredoxin peroxidase PMP20) (Thioredoxin-dependent peroxiredoxin 5)	cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; cellular response to reactive oxygen species [GO:0034614]; hydrogen peroxide catabolic process [GO:0042744]; inflammatory response [GO:0006954]; negative regulation of apoptotic process [GO:0043066]; negative regulation of oxidoreductase activity [GO:0051354]; negative regulation of transcription by RNA polymerase III [GO:0016480]; positive regulation of collagen biosynthetic process [GO:0032967]; reactive nitrogen species metabolic process [GO:2001057]; regulation of apoptosis involved in tissue homeostasis [GO:0060785]; response to oxidative stress [GO:0006979]	hit with GO BP
GN016946	Chromosome_3A	354	1	30	57.6271186440678	1.2813706563706564	1.0852713178294573	30	0	1.0852713178294573	30	0	NA	NA	NA	79.79854504756575	26	0.8461538461538461	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016945	Chromosome_3A	18615	7	225	34.885844748858446	0.3980594344184519	76.99494464708518	224	0.90625	91.18881118881119	26	0.9615384615384616	75.56526026625343	198	0.898989898989899	50.57369814651368	28	0.5357142857142857	methylated (>=50%)	Q6NRG0	E3 ubiquitin-protein ligase rnf8-B (EC 2.3.2.27) (RING finger protein 8-B) (RING-type E3 ubiquitin transferase rnf8-B)	DNA damage response [GO:0006974]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; double-strand break repair via nonhomologous end joining [GO:0006303]; epigenetic regulation of gene expression [GO:0040029]; isotype switching [GO:0045190]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; protein K48-linked ubiquitination [GO:0070936]; protein K6-linked ubiquitination [GO:0085020]; protein K63-linked ubiquitination [GO:0070534]; response to ionizing radiation [GO:0010212]; sperm DNA condensation [GO:0035092]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN016944	Chromosome_3A	6880	8	94	34.17151162790697	0.47161294368676593	80.62685760605243	94	0.9787234042553191	89.78494623655914	13	1	79.60348452988886	81	0.9753086419753086	35.957607872823615	42	0.30952380952380953	methylated (>=50%)	Q9NS73	MAP3K12-binding inhibitory protein 1 (MAPK upstream kinase-binding inhibitory protein) (MUK-binding inhibitory protein)	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of gene expression [GO:0010628]; positive regulation of JNK cascade [GO:0046330]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of DNA-templated transcription [GO:0006355]; regulation of embryonic development [GO:0045995]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of tubulin deacetylation [GO:0090043]	hit with GO BP
GN016943	Chromosome_3A	683	3	16	37.33528550512445	0.6724923076923077	0.35335689045936397	16	0	0.7246376811594203	5	0	0.17452006980802792	11	0	0.7501442585112522	89	0	unmethylated (<10%)	Q8IUN9	C-type lectin domain family 10 member A (C-type lectin superfamily member 14) (DC-asialoglycoprotein receptor) (DC-ASGPR) (Macrophage galactose-type lectin) (MGL) (Macrophage lectin 2) (CD antigen CD301)	immune response [GO:0006955]	hit with GO BP
GN016942	Chromosome_3A	1212	3	44	42.65676567656766	0.8078775943038934	1.1653313911143481	44	0	0.2808988764044944	12	0	1.4749262536873156	32	0	2.9591508523641044	53	0	unmethylated (<10%)	Q8K4Q8	Collectin-12 (Collectin placenta protein 1) (CL-P1) (Scavenger receptor with C-type lectin)	defense response to bacterium [GO:0042742]; immune response [GO:0006955]; phagocytosis, recognition [GO:0006910]	hit with GO BP
GN016941	Chromosome_3A	7258	8	212	35.96031964728575	0.9038392857142857	0.5429318318922179	212	0	0.5742725880551302	63	0	0.5317698391055359	149	0	0.31413612565445026	31	0	unmethylated (<10%)	Q0IIF9	Cytochrome P450 2U1 (Long-chain fatty acid omega-monooxygenase) (EC 1.14.14.80)	steroid metabolic process [GO:0008202]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN016956	Chromosome_3A	27064	3	571	35.91117351463198	0.6557896468238967	35.92425669312525	549	0.3533697632058288	0.8205128205128205	26	0	37.11444170115102	523	0.37093690248565964	0.6891271056661562	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016957	Chromosome_3A	5513	6	164	36.78577906765826	0.8827457194547693	0.6588833660848457	164	0	0.740009866798224	81	0	0.5873395692843159	83	0	0.5055976886962803	50	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN016958	Chromosome_3A	1948	3	63	37.83367556468173	0.9148130478859801	0.43252595155709345	63	0	0.44871794871794873	58	0	0.28735632183908044	5	0	5.516136415655756	63	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN016959	Chromosome_3A	567	1	3	39.329805996472665	0.13885714285714285	0	3	0	0	3	0	NA	NA	NA	0.5248425472358292	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016960	Chromosome_3A	324	1	10	42.901234567901234	0.6809583858764187	7.4576271186440675	10	0	7.4576271186440675	10	0	NA	NA	NA	0.5046863734679163	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016961	Chromosome_3A	23994	28	598	35.00875218804701	0.8135518837908411	0.9863382956564357	598	0	0.7503234152652005	161	0	1.0595601220099535	437	0	0.6211180124223602	50	0	unmethylated (<10%)	Q149M9	NACHT domain- and WD repeat-containing protein 1	intracellular signal transduction [GO:0035556]	hit with GO BP
GN016962	Chromosome_3A	492	1	19	43.90243902439025	0.8031617836583899	1.1075949367088607	19	0	1.1075949367088607	19	0	NA	NA	NA	0.7936507936507936	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016963	Chromosome_3A	2598	4	85	39.64588144726713	0.8327268476445101	0.6532532009406846	85	0	0.762582613116421	54	0	0.5376344086021505	31	0	1.7341040462427746	49	0	unmethylated (<10%)	Q8NBH2	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN016964	Chromosome_3A	1062	1	32	40.112994350282484	0.7564102564102564	2.600216684723727	32	0	2.600216684723727	32	0	NA	NA	NA	0.842911877394636	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016969	Chromosome_3A	31112	12	246	35.442915916688094	0.2532809983257457	49.84273110855389	242	0.5247933884297521	66.77148846960168	82	0.8292682926829268	42.83544853020935	160	0.36875	20.67669172932331	12	0.16666666666666666	sparse (10-50%)	Q7TNC6	Kinesin-like protein KIF26B	establishment of cell polarity [GO:0030010]; microtubule-based movement [GO:0007018]; positive regulation of cell-cell adhesion [GO:0022409]; ureteric bud invasion [GO:0072092]	hit with GO BP
GN016976	Chromosome_3A	15697	14	271	34.044721921386255	0.5961381720746551	86.04296895519252	260	0.9192307692307692	85.73883161512028	19	0.7894736842105263	86.06277625468584	241	0.9294605809128631	0.5878510777269759	56	0	methylated (>=50%)	Q9UNH7	Sorting nexin-6 (TRAF4-associated factor 2) [Cleaved into: Sorting nexin-6, N-terminally processed]	cellular response to amyloid-beta [GO:1904646]; cellular response to epidermal growth factor stimulus [GO:0071364]; intracellular protein transport [GO:0006886]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epidermal growth factor-activated receptor activity [GO:0007175]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; regulation of macroautophagy [GO:0016241]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN016975	Chromosome_3A	17250	25	145	33.86086956521739	0.29507529507529506	69.16965937534007	143	0.8251748251748252	70.88821344140493	50	0.88	68.35260115606937	93	0.7956989247311828	0.8287779932992417	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016974	Chromosome_3A	731	2	26	39.12448700410397	0.9371794871794872	0.2364066193853428	26	0	0.26064291920069504	24	0	0	2	0	0.5109489051094891	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016973	Chromosome_3A	1180	4	28	35.08474576271186	0.776954732510288	0.47489823609226595	28	0	0.3714020427112349	21	0	0.7556675062972292	7	0	0.596529284164859	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016972	Chromosome_3A	1179	3	25	44.10517387616624	0.43945967705863936	1.0610079575596818	25	0	1.0362694300518134	20	0	1.1428571428571428	5	0	0.8314087759815243	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016971	Chromosome_3A	1852	4	39	36.879049676025915	0.6194936187731577	0.4884004884004884	39	0	0.5341880341880342	25	0	0.42735042735042733	14	0	0.4181184668989547	49	0	unmethylated (<10%)	P30437	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN016988	Chromosome_3A	2000	5	63	37.95	0.887074063644044	0.6205094709340301	63	0	0.7547169811320755	51	0	0.14771048744460857	12	0	0.7352941176470589	34	0	unmethylated (<10%)	Q501P1	Fibulin-7 (FIBL-7) (Protein TM14)	NA	hit, no GO BP
GN016987	Chromosome_3A	54958	48	1157	34.26070817715346	0.7176250318147398	1.3836054536273354	1096	0	0.5606392576362933	309	0	1.674564840973298	787	0	0.8114248620577734	38	0	unmethylated (<10%)	Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (CCP module-containing protein 22) (Polydom) (Selectin-like osteoblast-derived protein) (SEL-OB) (Serologically defined breast cancer antigen NY-BR-38)	epidermis development [GO:0008544]; lymph vessel morphogenesis [GO:0036303]; negative regulation of vasoconstriction [GO:0045906]; positive regulation of platelet activation [GO:0010572]	hit with GO BP
GN016986	Chromosome_3A	3897	7	113	36.309982037464714	0.8912819080465354	0.6416751097602161	113	0	0.4933783432874578	61	0	0.7551669316375199	52	0	0.5037783375314862	56	0	unmethylated (<10%)	Q501P1	Fibulin-7 (FIBL-7) (Protein TM14)	NA	hit, no GO BP
GN016985	Chromosome_3A	2046	1	34	40.17595307917889	0.41205774163166903	38.434661076170514	34	0.5294117647058824	38.434661076170514	34	0.5294117647058824	NA	NA	NA	0.47619047619047616	38	0	sparse (10-50%)	Q6TDP3	Kelch-like protein 17 (Actinfilin)	actin cytoskeleton organization [GO:0030036]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation protein catabolic process at postsynapse [GO:0140252]	hit with GO BP
GN016984	Chromosome_3A	11306	8	223	34.114629400318414	0.6815833083271832	0.7215316473781969	223	0	0.6031882809133994	40	0	0.7450543804059262	183	0	0.5718954248366013	48	0	unmethylated (<10%)	P42620	Glutathionyl-hydroquinone reductase YqjG (GS-HQR) (EC 1.8.5.7)	NA	hit, no GO BP
GN016989	Chromosome_3A	13287	9	141	34.58267479491232	0.3568891972394749	81.29849383842993	141	0.8865248226950354	83.51167315175097	45	0.9111111111111111	80.62015503875969	96	0.875	64.55266138165345	13	0.8461538461538461	methylated (>=50%)	P16554	Protein numb	asymmetric neuroblast division [GO:0055059]; centrosome localization [GO:0051642]; embryonic heart tube development [GO:0035050]; enteroendocrine cell differentiation [GO:0035883]; glial cell migration [GO:0008347]; intracellular protein localization [GO:0008104]; Malpighian tubule tip cell differentiation [GO:0061382]; muscle cell fate specification [GO:0042694]; negative regulation of gene expression [GO:0010629]; negative regulation of neuroblast proliferation [GO:0007406]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of receptor recycling [GO:0001920]; neuroblast development [GO:0014019]; neuroblast proliferation [GO:0007405]; pericardial nephrocyte differentiation [GO:0061320]; positive regulation of endocytosis [GO:0045807]; regulation of asymmetric cell division [GO:0009786]; regulation of nervous system development [GO:0051960]; regulation of neuroblast proliferation [GO:1902692]; regulation of neurogenesis [GO:0050767]; sensory organ precursor cell division [GO:0045035]; sensory organ precursor cell fate determination [GO:0016360]	hit with GO BP
GN016990	Chromosome_3A	3414	2	43	37.844171060339775	0.35725549747393626	59.15903413821815	43	0.6511627906976745	53.40965654554505	35	0.5714285714285714	88.54961832061069	8	1	26.178861788617887	25	0.16	methylated (>=50%)	Q5ZIL9	KIF-binding protein (KIF1-binding protein)	central nervous system projection neuron axonogenesis [GO:0021952]; microtubule cytoskeleton organization [GO:0000226]; mitochondrion transport along microtubule [GO:0047497]; neuron projection maintenance [GO:1990535]	hit with GO BP
GN016991	Chromosome_3A	13571	9	178	34.603197995726184	0.4466146216102537	83.17525420832266	178	0.9382022471910112	58.312655086848636	6	0.6666666666666666	84.06194690265487	172	0.9476744186046512	0.6671348314606742	34	0	methylated (>=50%)	Q7M456	Ribonuclease Oy (RNase Oy) (EC 3.1.27.-)	RNA catabolic process [GO:0006401]	hit with GO BP
GN016994	Chromosome_3A	1141	2	15	34.969325153374236	0.43556268132539316	18.22752985543683	14	0	12.98342541436464	4	0	19.772172497965826	10	0	15.748469671675014	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016993	Chromosome_3A	11864	9	162	36.4969656102495	0.41267894503591784	91.62575528700906	159	0.949685534591195	95.89169000933707	23	1	91.1458880369709	136	0.9411764705882353	94.58715596330275	17	1	methylated (>=50%)	P29691	Elongation factor 2 (EF-2) (EC 3.6.5.-)	defense response to Gram-negative bacterium [GO:0050829]; negative regulation of gene expression [GO:0010629]; translational elongation [GO:0006414]	hit with GO BP
GN016992	Chromosome_3A	19049	12	303	36.47435560921833	0.4796103287137901	76.66209528352513	213	0.8873239436619719	48.6594409583571	32	0.5625	79.93074976694633	181	0.9447513812154696	0.5441824306815237	74	0	methylated (>=50%)	Q9BWU0	Kanadaptin (Human lung cancer oncogene 3 protein) (HLC-3) (Kidney anion exchanger adapter protein) (Solute carrier family 4 anion exchanger member 1 adapter protein)	NA	hit, no GO BP
GN016995	Chromosome_3A	1330	2	6	38.94736842105263	0.11913826308953285	86.08695652173913	6	1	87.07482993197279	5	1	80.3921568627451	1	1	72.9253112033195	18	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016996	Chromosome_3A	3833	6	36	33.863814244716934	0.3307224757449093	87.02702702702703	36	1	83.96694214876032	9	1	88.17337461300309	27	1	81.708238851096	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016997	Chromosome_3A	273	1	22	52.38095238095238	1.1776470588235295	0.7159904534606205	22	0	0.7159904534606205	22	0	NA	NA	NA	0.9470934030045721	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016998	Chromosome_3A	35124	35	455	35.63375469764264	0.40877919323825723	86.59086741243352	441	0.9569160997732427	91.3947304810249	84	0.9880952380952381	85.73158076790038	357	0.9495798319327731	0.7092198581560284	40	0	methylated (>=50%)	P28668	Bifunctional glutamate/proline--tRNA ligase (Bifunctional aminoacyl-tRNA synthetase) [Includes: Glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase); Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)]	glutamyl-tRNA aminoacylation [GO:0006424]; prolyl-tRNA aminoacylation [GO:0006433]	hit with GO BP
GN017000	Chromosome_3A	3819	6	30	35.32338308457712	0.2518907747779439	89.82371794871794	30	1	90.4692082111437	11	1	89.58103638368247	19	1	92.6942404329339	46	1	methylated (>=50%)	Q2YDP3	Dr1-associated corepressor (Dr1-associated protein 1) (Negative cofactor 2-alpha) (NC2-alpha)	negative regulation of transcription by RNA polymerase II [GO:0000122]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN017001	Chromosome_3A	19868	28	304	35.02113952083753	0.5050144651248348	82.74982610711801	303	0.9141914191419142	85.51094890510949	43	0.9302325581395349	82.34794156706508	260	0.9115384615384615	1.0984699882306788	40	0	methylated (>=50%)	P53569	CCAAT/enhancer-binding protein zeta (CCAAT-box-binding transcription factor) (CBF) (CCAAT-binding factor)	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN017002	Chromosome_3A	708	1	24	42.51412429378531	0.7525910178049429	0.6418485237483954	24	0	0.6418485237483954	24	0	NA	NA	NA	4.4272021907804655	51	0	unmethylated (<10%)	Q3MHQ7	Lysoplasmalogenase TMEM86A (EC 3.3.2.2) (Transmembrane protein 86A)	NA	hit, no GO BP
GN017005	Chromosome_3A	12887	11	145	33.925661519360595	0.3939836069894315	78.19548872180451	145	0.9172413793103448	75	19	0.7368421052631579	78.51239669421487	126	0.9444444444444444	15.22773623385452	21	0.14285714285714285	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017006	Chromosome_3A	16353	10	153	36.91677368067021	0.2823988920793152	68.54256854256855	149	0.7315436241610739	90.1135288552507	51	1	60.26502087493193	98	0.5918367346938775	53.68663594470046	15	0.7333333333333333	methylated (>=50%)	O88801	Homer protein homolog 2 (Homer-2) (Cupidin) (VASP/Ena-related gene up-regulated during seizure and LTP 2) (Vesl-2)	behavioral response to cocaine [GO:0048148]; calcium-mediated signaling [GO:0019722]; cellular response to L-glutamate [GO:1905232]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of interleukin-2 production [GO:0032703]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; regulation of glutamate secretion [GO:0014048]; regulation of store-operated calcium entry [GO:2001256]; regulation of synaptic transmission, glutamatergic [GO:0051966]; response to cocaine [GO:0042220]; response to ethanol [GO:0045471]; sensory perception of sound [GO:0007605]	hit with GO BP
GN017009	Chromosome_3A	7436	11	85	33.633674018289405	0.4062296342095149	70.0474279460051	85	0.8117647058823529	78.08219178082192	13	0.7692307692307693	68.81313131313131	72	0.8194444444444444	0.41246562786434465	64	0	methylated (>=50%)	H2FLJ1	Stomatin-like protein stl-1	mitochondrion organization [GO:0007005]	hit with GO BP
GN017010	Chromosome_3A	6882	7	92	32.28712583551293	0.5132090887868649	77.47001713306682	92	0.9456521739130435	79.11051212938006	15	1	77.27563078888534	77	0.935064935064935	76.54723127035831	7	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017011	Chromosome_3A	5501	7	88	36.13888383930195	0.49225350107584614	61.45383951682485	88	0.6931818181818182	87.5	29	0.9310344827586207	48.946360153256705	59	0.576271186440678	65.54673182651192	39	0.48717948717948717	methylated (>=50%)	C0HBB2	Glycosylated lysosomal membrane protein (Lysosomal protein NCU-G1)	protein localization to lysosome [GO:0061462]; protein stabilization [GO:0050821]	hit with GO BP
GN017012	Chromosome_3A	3462	4	27	32.9000577700751	0.2892069503230118	71.1889132020423	27	0.8518518518518519	68.51282051282051	20	0.85	77.77777777777777	7	0.8571428571428571	33.883907503539405	29	0.3793103448275862	methylated (>=50%)	Q3U1D0	Protein Lines homolog 1 (Protein Lines homolog 2) (Wnt-signaling molecule Lines homolog 1)	cognition [GO:0050890]	hit with GO BP
GN017013	Chromosome_3A	4700	3	55	34.04255319148936	0.4072046073192862	81.49584487534626	53	0.8490566037735849	64.11092985318108	19	0.631578947368421	90.43624161073825	34	0.9705882352941176	30.970149253731343	31	0.5161290322580645	methylated (>=50%)	Q6PUR6	GPN-loop GTPase 2 (EC 3.6.5.-) (ATP-binding domain 1 family member B)	NA	hit, no GO BP
GN017014	Chromosome_3A	17993	10	401	37.45901183793698	0.6402867023330394	0.605402935633103	401	0	0.5527043031977892	74	0	0.6143162393162394	327	0	0.8588957055214724	60	0	unmethylated (<10%)	P86786	Gigasin-3a	NA	hit, no GO BP
GN017015	Chromosome_3A	5041	7	39	32.47371553263241	0.2948616422947132	90.10642491131257	39	1	93.84203480589022	12	1	88.54748603351955	27	1	36.57628920786816	39	0.4358974358974359	methylated (>=50%)	Q3ZCK9	Proteasome subunit alpha type-4	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN017016	Chromosome_3A	25614	16	387	35.83196689310533	0.4714100406741771	80.7502467917078	320	0.95	95.9417273673257	35	1	79.24138287427006	285	0.9438596491228071	96.5587044534413	15	1	methylated (>=50%)	P50904	Ras GTPase-activating protein 1 (GAP) (GTPase-activating protein) (RasGAP) (Ras p21 protein activator) (p120GAP)	actin cytoskeleton organization [GO:0030036]; activation of GTPase activity [GO:0090630]; angiogenesis [GO:0001525]; blood vessel morphogenesis [GO:0048514]; cell adhesion [GO:0007155]; cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to platelet-derived growth factor stimulus [GO:0036120]; ephrin receptor signaling pathway [GO:0048013]; male genitalia development [GO:0030539]; mitotic cytokinesis [GO:0000281]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell adhesion [GO:0007162]; negative regulation of cell-matrix adhesion [GO:0001953]; negative regulation of neuron apoptotic process [GO:0043524]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of fibroblast proliferation [GO:0048146]; positive regulation of GTPase activity [GO:0043547]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; positive regulation of protein phosphorylation [GO:0001934]; regulation of actin filament polymerization [GO:0030833]; regulation of intracellular signal transduction [GO:1902531]; response to insulin [GO:0032868]; response to xenobiotic stimulus [GO:0009410]; signal transduction [GO:0007165]; vasculogenesis [GO:0001570]	hit with GO BP
GN017017	Chromosome_3A	1468	3	9	31.33514986376022	0.24998580916160526	86.5040650406504	9	1	80.6282722513089	3	1	89.15094339622641	6	1	88.36820083682008	14	0.9285714285714286	methylated (>=50%)	Q17QS1	Sorting nexin-24	NA	hit, no GO BP
GN017018	Chromosome_3A	24104	14	347	37.18469963491537	0.4179813651435594	82.0640504362922	335	0.9343283582089552	87.73062730627306	44	1	81.4411033923229	291	0.9243986254295533	91.43774527292187	36	1	methylated (>=50%)	Q1LWH4	Fanconi-associated nuclease 1 (EC 3.1.21.-) (EC 3.1.4.1) (FANCD2/FANCI-associated nuclease 1) (Myotubularin-related protein 15)	DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; interstrand cross-link repair [GO:0036297]; nucleotide-excision repair [GO:0006289]	hit with GO BP
GN017019	Chromosome_3A	34504	29	386	35.842221191745885	0.3486834165055139	75.98009519688446	386	0.9041450777202072	69.88577362409139	72	0.8611111111111112	76.85079867464518	314	0.9140127388535032	78.86696371737747	43	0.9069767441860465	methylated (>=50%)	Q6JAN0	Adhesion G protein-coupled receptor V1 (EC 3.4.-.-) (G protein-coupled receptor 98) (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G protein-coupled receptor 1)	cell surface receptor signaling pathway [GO:0007166]; cellular response to calcium ion [GO:0071277]; eye photoreceptor cell development [GO:0042462]; G protein-coupled receptor signaling pathway [GO:0007186]; regulation of protein stability [GO:0031647]; self proteolysis [GO:0097264]; sensory perception of sound [GO:0007605]; visual perception [GO:0007601]	hit with GO BP
GN017020	Chromosome_3A	4284	4	47	34.03361344537815	0.37915716488934	63.59060402684564	47	0.8085106382978723	87.71331058020478	6	1	60.960178637886116	41	0.7804878048780488	80.24132730015083	16	1	methylated (>=50%)	B0BML1	Gluconokinase (EC 2.7.1.12) (Gluconate kinase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN017021	Chromosome_3A	636	1	0	47.9559748427673	0	NA	0	NA	NA	NA	NA	NA	NA	NA	75.41478129713424	58	0.8275862068965517	NA	NA	NA	NA	no Swiss-Prot hit
GN017022	Chromosome_3A	44812	17	488	34.164955815406586	0.374333055873416	84.05090274861924	479	0.9164926931106472	78.7359716479622	36	0.8333333333333334	84.35834358343584	443	0.9232505643340858	65.35307061412283	67	0.6567164179104478	methylated (>=50%)	Q6P5H6	FERM domain-containing protein 5	actomyosin structure organization [GO:0031032]; negative regulation of cell motility [GO:2000146]; positive regulation of cell adhesion [GO:0045785]; regulation of cell migration [GO:0030334]	hit with GO BP
GN017023	Chromosome_3A	3404	5	102	37.54406580493537	0.8518518518518519	1.2348401323043	102	0	1.0560281607509534	80	0	1.7761989342806395	22	0	1.1780697779791571	42	0	unmethylated (<10%)	P05099	Matrilin-1 (Cartilage matrix protein)	NA	hit, no GO BP
GN017024	Chromosome_3A	620	2	13	52.41935483870968	0.3053724331287414	1.7391304347826086	5	0	3.076923076923077	4	0	0	1	0	1.8109380659181455	93	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017025	Chromosome_3A	1162	2	15	44.66437177280551	0.2588357588357588	1.680672268907563	15	0	1.5197568389057752	14	0	3.5714285714285716	1	0	0.665680473372781	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017027	Chromosome_3A	2938	4	39	35.9428182437032	0.411484593837535	0.5389221556886228	39	0	0.6103763987792472	29	0	0.4366812227074236	10	0	0.760043431053203	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017026	Chromosome_3A	576	1	18	42.013888888888886	0.7140495867768595	0.8865248226950354	18	0	0.8865248226950354	18	0	NA	NA	NA	1.0294117647058822	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017028	Chromosome_3A	8716	3	219	36.86324001835705	0.7408745468518332	0.8583212573849069	213	0	0.272108843537415	19	0	0.9106362311801846	194	0	0.9838646202282566	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017029	Chromosome_3A	1193	2	30	36.46269907795474	0.7671039094650206	11.975591151792525	30	0.06666666666666667	10.372129849564528	29	0.034482758620689655	54.166666666666664	1	1	1.6490486257928119	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017030	Chromosome_3A	4448	3	134	37.072841726618705	0.877976637647856	0.7464114832535885	134	0	0.9202453987730062	11	0	0.7216269407391209	123	0	0.7757166947723441	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017031	Chromosome_3A	489	1	19	44.58077709611452	0.7886427298192004	0.36496350364963503	19	0	0.36496350364963503	19	0	NA	NA	NA	0.8247422680412371	49	0	unmethylated (<10%)	Q8NFW1	Collagen alpha-1(XXII) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN017032	Chromosome_3A	1008	1	28	37.40079365079365	0.7997279836790208	9.09970958373669	28	0	9.09970958373669	28	0	NA	NA	NA	0.7430997876857749	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017033	Chromosome_3A	6402	4	217	37.925648234926584	0.9426255536737884	0.7435322876349562	217	0	0.354251012145749	37	0	0.8416220351951033	180	0	0.23809523809523808	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017034	Chromosome_3A	4421	4	161	38.2040262384076	0.9986264661316572	0.5616316878510198	161	0	0.7250755287009063	86	0	0.4050925925925926	75	0	0.42884990253411304	56	0	unmethylated (<10%)	P05099	Matrilin-1 (Cartilage matrix protein)	NA	hit, no GO BP
GN017035	Chromosome_3A	2767	6	88	37.188290567401516	0.9224940709366026	0.5591054313099042	88	0	0.6177325581395349	63	0	0.398406374501992	25	0	0.9049773755656109	43	0	unmethylated (<10%)	A6NMZ7	Collagen alpha-6(VI) chain	extracellular matrix organization [GO:0030198]	hit with GO BP
GN017036	Chromosome_3A	4453	4	130	36.64944980911745	0.869439187768466	0.44515669515669515	119	0	0.16433853738701726	27	0	0.5228461013866788	92	0	0.7978723404255319	49	0	unmethylated (<10%)	Q8L4N1	Universal stress protein PHOS34 (Phosphorylated protein of 34 kDa) (AtPHOS34)	response to molecule of fungal origin [GO:0002238]	hit with GO BP
GN017037	Chromosome_3A	1682	4	37	33.53151010701546	0.7934468030853573	0.6323777403035413	37	0	0.8281573498964804	18	0	0.49786628733997157	19	0	0.6142506142506142	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017038	Chromosome_3A	174	1	5	43.67816091954023	0.6473214285714286	1.0638297872340425	5	0	1.0638297872340425	5	0	NA	NA	NA	1.2435991221653255	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017039	Chromosome_3A	13372	7	142	35.16302722105893	0.3455673826950239	87.37645036527718	141	0.9645390070921985	80.38632986627043	11	0.9090909090909091	87.9212507237985	130	0.9692307692307692	83.33333333333333	18	1	methylated (>=50%)	Q5REQ8	m7GpppN-mRNA hydrolase (EC 3.6.1.62) (mRNA-decapping enzyme 2)	deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; histone mRNA catabolic process [GO:0071044]; mRNA catabolic process [GO:0006402]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; regulation of mRNA stability [GO:0043488]	hit with GO BP
GN017040	Chromosome_3A	2201	2	23	32.167196728759656	0.40918717061657345	70.52178590640129	23	0.7391304347826086	76.8990634755463	14	0.7857142857142857	63.69710467706013	9	0.6666666666666666	22.295673076923077	44	0.36363636363636365	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017046	Chromosome_3A	165	1	2	45.45454545454545	0.2507598784194529	1.0309278350515463	2	0	1.0309278350515463	2	0	NA	NA	NA	0.7915567282321899	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017042	Chromosome_3A	852	1	13	39.08450704225352	0.4014498006524103	0	2	0	0	2	0	NA	NA	NA	0.9603841536614646	48	0	NA	Q17QW3	Retinol dehydrogenase 14 (EC 1.1.1.300)	retinol metabolic process [GO:0042572]	hit with GO BP
GN017043	Chromosome_3A	4388	7	52	34.36645396536007	0.41464606907981416	4.7136340598074	39	0	3.6496350364963503	11	0	4.99359795134443	28	0	0.6479481641468683	26	0	unmethylated (<10%)	Q62651	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (EC 5.3.3.21)	fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN017045	Chromosome_3A	852	1	13	39.08450704225352	0.4014498006524103	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9379187137114784	51	0	NA	Q17QW3	Retinol dehydrogenase 14 (EC 1.1.1.300)	retinol metabolic process [GO:0042572]	hit with GO BP
GN017044	Chromosome_3A	273	1	7	45.05494505494506	0.5128824476650563	0.8403361344537815	7	0	0.8403361344537815	7	0	NA	NA	NA	0.5638134290107637	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017041	Chromosome_3A	390	1	3	39.743589743589745	0.19545606414968258	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6482982171799028	27	0	NA	Q17QW3	Retinol dehydrogenase 14 (EC 1.1.1.300)	retinol metabolic process [GO:0042572]	hit with GO BP
GN012998	Chromosome_3A	286	1	7	44.75524475524475	0.4965277777777778	0.5347593582887701	7	0	0.5347593582887701	7	0	NA	NA	NA	0.6690279417552145	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017051	Chromosome_3A	954	1	16	38.888888888888886	0.4467076382791923	9.847434119278779	16	0	9.847434119278779	16	0	NA	NA	NA	3.772931810314988	42	0	unmethylated (<10%)	Q17QW3	Retinol dehydrogenase 14 (EC 1.1.1.300)	retinol metabolic process [GO:0042572]	hit with GO BP
GN017050	Chromosome_3A	774	1	27	43.92764857881137	0.7404336734693877	5.294117647058823	9	0	5.294117647058823	9	0	NA	NA	NA	1.214574898785425	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017049	Chromosome_3A	603	1	26	42.62023217247098	0.958547322083639	6.70897552130553	26	0	6.70897552130553	26	0	NA	NA	NA	4.507116499736426	54	0.018518518518518517	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017048	Chromosome_3A	34484	19	472	34.27386614081893	0.4662681896452695	83.29276949599432	459	0.9586056644880174	91.08855047941343	33	1	82.92585808712272	426	0.9553990610328639	91.10512129380054	30	0.9333333333333333	methylated (>=50%)	Q8N2M8	CLK4-associating serine/arginine rich protein (Splicing factor, arginine/serine-rich 16) (Suppressor of white-apricot homolog 2)	NA	hit, no GO BP
GN017047	Chromosome_3A	2493	3	80	38.98916967509025	0.8443977780788511	0.4893238434163701	78	0	0.16286644951140064	29	0	0.6119951040391677	49	0	1.382886776145203	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017054	Chromosome_3A	357	1	8	45.378151260504204	0.4420368364030336	2.112676056338028	8	0	2.112676056338028	8	0	NA	NA	NA	1.6364440513047325	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017053	Chromosome_3A	270	1	5	44.81481481481482	0.3694581280788177	0	5	0	0	5	0	NA	NA	NA	0.9230769230769231	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017052	Chromosome_3A	294	1	14	44.21768707482993	1.0029239766081872	0.7407407407407407	14	0	0.7407407407407407	14	0	NA	NA	NA	9.532267613972765	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017055	Chromosome_3A	1734	4	49	37.60092272202999	0.7997552710843373	0.5280259951259139	49	0	0.5430566330488751	31	0	0.5115089514066496	18	0	0.42426813746287656	40	0	unmethylated (<10%)	P86982	Insoluble matrix shell protein 1 (IMSP1)	NA	hit, no GO BP
GN017056	Chromosome_3A	823	2	4	52.97691373025516	0.10240139355480901	97.84946236559139	3	1	97.84946236559139	3	1	NA	NA	NA	90.89301503094606	14	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017057	Chromosome_3A	3319	10	108	39.16842422416391	0.8486963604163312	0.7046764894298526	108	0	0.6535947712418301	70	0	0.7684918347742555	38	0	1.0594196222938739	66	0	unmethylated (<10%)	Q99N01	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)	sodium-independent organic anion transport [GO:0043252]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN001689	Chromosome_3A	642	1	24	40.965732087227416	0.8939429101879787	0.2881844380403458	24	0	0.2881844380403458	24	0	NA	NA	NA	4.576098059244127	63	0	unmethylated (<10%)	Q9CUX1	52 kDa repressor of the inhibitor of the protein kinase (p52rIPK) (58 kDa interferon-induced protein kinase-interacting protein) (p58IPK-interacting protein) (THAP domain-containing protein 0) (THAP domain-containing protein 12)	NA	hit, no GO BP
GN017058	Chromosome_3A	3289	3	43	34.539373669808455	0.441133627990106	3.003003003003003	41	0	1.2704174228675136	14	0	3.6627505183137528	27	0	0.9213759213759214	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017059	Chromosome_3A	342	1	15	51.16959064327485	0.6711145996860283	0.6756756756756757	12	0	0.6756756756756757	12	0	NA	NA	NA	0.7202881152460985	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017060	Chromosome_3A	201	1	6	49.75124378109453	0.49855312112443156	0	6	0	0	6	0	NA	NA	NA	0.7002801120448179	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017061	Chromosome_3A	855	1	24	46.198830409356724	0.5323785803237858	0	24	0	0	24	0	NA	NA	NA	0.4941087039148613	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017062	Chromosome_3A	228	1	9	64.03508771929825	0.40203761755485895	NA	0	NA	NA	NA	NA	NA	NA	NA	0.1360544217687075	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017065	Chromosome_3A	14766	9	438	36.407964242177975	0.8967271130012029	0.9725734292939117	433	0	1.103391908459338	61	0	0.9549042335927582	372	0	0.6416426050689766	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017066	Chromosome_3A	31935	24	451	35.412556755910444	0.45551089148052976	77.18955161335381	451	0.8381374722838137	82.65017667844523	59	0.8983050847457628	76.5907153375184	392	0.8290816326530612	11.49495567104861	40	0.1	methylated (>=50%)	Q91684	DNA polymerase subunit gamma-1 (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)	mitochondrial DNA replication [GO:0006264]	hit with GO BP
GN017067	Chromosome_3A	474	1	11	43.037974683544306	0.5012015764683264	2.4242424242424243	11	0	2.4242424242424243	11	0	NA	NA	NA	0.6392045454545454	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017068	Chromosome_3A	612	1	18	40.35947712418301	0.7222659323367427	1.358695652173913	18	0	1.358695652173913	18	0	NA	NA	NA	1.942533387292594	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017069	Chromosome_3A	882	1	18	44.67120181405895	0.40908036795588654	0	18	0	0	18	0	NA	NA	NA	0.4103967168262654	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017071	Chromosome_3A	450	1	12	42.888888888888886	0.6101694915254238	0.6741573033707865	12	0	0.6741573033707865	12	0	NA	NA	NA	3.066989507667474	68	0	unmethylated (<10%)	Q9FT69	ATP-dependent DNA helicase Q-like SIM (EC 5.6.2.4) (DNA 3'-5' helicase RecQSIM) (RecQ-like protein SIM) (AtRecQsim) (Similar to RecQ protein)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN017070	Chromosome_3A	1180	1	7	36.69491525423729	0.17623213142735225	5.111821086261981	7	0	5.111821086261981	7	0	NA	NA	NA	1.7664376840039253	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017076	Chromosome_3A	3266	4	80	35.11941212492346	0.7956247944554745	0.5209690023443605	80	0	0.5361930294906166	15	0	0.5172971225347559	65	0	1.079414032382421	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017075	Chromosome_3A	6147	5	170	37.172604522531316	0.8039893641575804	5.662514156285391	169	0	0.6191950464396285	17	0	6.170146463072609	152	0	0.7014590347923682	52	0	unmethylated (<10%)	Q32LB5	GLIPR1-like protein 1	fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]	hit with GO BP
GN017074	Chromosome_3A	429	1	23	47.31934731934732	0.977705112960761	0.984009840098401	23	0	0.984009840098401	23	0	NA	NA	NA	0.59721300597213	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017073	Chromosome_3A	342	1	16	41.52046783625731	1.0909090909090908	0.8156606851549756	16	0	0.8156606851549756	16	0	NA	NA	NA	4.219409282700422	52	0.019230769230769232	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017079	Chromosome_3A	6394	7	72	38.41101032217704	0.3065882428155867	66.99333594668758	72	0.8055555555555556	76.87116564417178	53	0.9245283018867925	49.5114006514658	19	0.47368421052631576	24.917218543046356	18	0.1111111111111111	methylated (>=50%)	Q9P203	BTB/POZ domain-containing protein 7	morphogenesis of a branching epithelium [GO:0061138]; regulation of branching involved in salivary gland morphogenesis [GO:0060693]	hit with GO BP
GN017078	Chromosome_3A	37598	31	386	33.31826160966009	0.3709614300340252	77.91691512621745	380	0.8894736842105263	72.53702511268513	52	0.8269230769230769	78.67476983083132	328	0.899390243902439	37.711148648648646	38	0.47368421052631576	methylated (>=50%)	E9PV86	Multiple C2 and transmembrane domain-containing protein 1	negative regulation of cell migration [GO:0030336]; negative regulation of endocytosis [GO:0045806]; negative regulation of response to oxidative stress [GO:1902883]; regulation of neurotransmitter secretion [GO:0046928]	hit with GO BP
GN017077	Chromosome_3A	15741	7	201	34.98507083412744	0.4175245610367893	86.23776998338563	188	0.9521276595744681	85.32695374800637	11	0.9090909090909091	86.29371999608112	177	0.9548022598870056	13.445835601524225	24	0.08333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017080	Chromosome_3A	1443	1	48	41.02564102564103	0.7916338076461512	0.9137635636778983	48	0	0.9137635636778983	48	0	NA	NA	NA	1.4513788098693758	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017083	Chromosome_3A	60965	29	577	35.30222258673009	0.30430651601831854	74.64850374746977	557	0.8420107719928187	76.08422375864237	76	0.8947368421052632	74.5116251198466	481	0.8336798336798337	48.611111111111114	16	0.4375	methylated (>=50%)	Q00IB7	Pleckstrin homology domain-containing family H member 1 (PH domain-containing family H member 1) (Protein max-1 homolog)	blood vessel morphogenesis [GO:0048514]; branching involved in blood vessel morphogenesis [GO:0001569]	hit with GO BP
GN002463	Chromosome_3A	174	1	10	44.252873563218394	1.174089068825911	73.91634980988593	10	1	73.91634980988593	10	1	NA	NA	NA	83.01384451544196	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017084	Chromosome_3A	1393	2	68	44.7954055994257	0.9793732358688572	0.656934306569343	62	0	0.70859167404783	56	0	0.4149377593360996	6	0	0.2815768302493966	57	0	unmethylated (<10%)	A4IIN5	mRNA decay activator protein ZFP36L2 (Zinc finger protein 36, C3H1 type-like 2)	3'-UTR-mediated mRNA destabilization [GO:0061158]; cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to tumor necrosis factor [GO:0071356]; definitive hemopoiesis [GO:0060216]; ERK1 and ERK2 cascade [GO:0070371]; hemopoiesis [GO:0030097]; MAPK cascade [GO:0000165]; mRNA catabolic process [GO:0006402]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of mitotic cell cycle phase transition [GO:1901991]; negative regulation of stem cell differentiation [GO:2000737]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; nuclear-transcribed mRNA catabolic process, deadenylation-independent decay [GO:0031086]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; pronephros development [GO:0048793]; regulation of B cell differentiation [GO:0045577]; regulation of mRNA stability [GO:0043488]; somatic stem cell division [GO:0048103]; somatic stem cell population maintenance [GO:0035019]	hit with GO BP
GN017085	Chromosome_3A	2827	3	13	33.250795896710294	0.16641761307033273	79.15632754342431	13	0.9230769230769231	83.07692307692308	5	1	77.28937728937728	8	0.875	42.969307637401855	33	0.48484848484848486	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017086	Chromosome_3A	5286	1	57	38.95194854332198	0.2900760566092231	89.22969675845242	57	1	89.22969675845242	57	1	NA	NA	NA	64.58010536101642	45	0.8222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017087	Chromosome_3A	261	1	13	43.67816091954023	1.0927536231884059	0.28901734104046245	13	0	0.28901734104046245	13	0	NA	NA	NA	0.9185303514376997	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017088	Chromosome_3A	545	2	5	50.825688073394495	0.14463906581740976	0.9090909090909091	5	0	0.9090909090909091	5	0	NA	NA	NA	0.5799202609641174	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017089	Chromosome_3A	607	2	27	53.87149917627677	0.6186395893099804	1.976284584980237	11	0	2.293577981651376	10	0	0	1	0	0.3525264394829612	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017090	Chromosome_3A	165	1	2	54.54545454545455	0.16828148903620602	0	2	0	0	2	0	NA	NA	NA	1.3108614232209739	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017091	Chromosome_3A	543	1	8	59.11602209944751	0.1778287211396758	0	1	0	0	1	0	NA	NA	NA	0.7125890736342043	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017092	Chromosome_3A	307	2	4	54.071661237785015	0.1783587509077705	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6306937631394534	82	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017093	Chromosome_3A	1146	2	42	41.273996509598604	0.8606372706791117	0.625355315520182	42	0	0.707395498392283	37	0	0	5	0	0.40313549832026874	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017094	Chromosome_3A	1909	3	64	40.073336825563125	0.8370283083500041	0.7649938800489596	64	0	0.7217847769028871	36	0	0.8027522935779816	28	0	0.34628703347441325	37	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN017095	Chromosome_3A	1278	3	48	40.21909233176839	0.9304696032034947	0.3770028275212064	48	0	0.34266133637921187	41	0	0.5390835579514824	7	0	0.6018518518518519	38	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN017096	Chromosome_3A	1146	1	40	43.54275741710297	0.7374517374517374	0.5208333333333334	40	0	0.5208333333333334	40	0	NA	NA	NA	1.9792648444863337	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017097	Chromosome_3A	822	1	42	45.742092457420924	0.9858366647629926	0.2764976958525346	42	0	0.2764976958525346	42	0	NA	NA	NA	0.46107946840249525	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017098	Chromosome_3A	897	1	43	44.927536231884055	0.9516654330125832	0.6644518272425249	43	0	0.6644518272425249	43	0	NA	NA	NA	0.594679186228482	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017099	Chromosome_3A	8306	6	250	36.34721887791957	0.9122901051780646	0.6884263383817931	250	0	1.0430247718383312	27	0	0.6381207805419402	223	0	0.8305647840531561	32	0	unmethylated (<10%)	P34140	Ras-related protein Rab-1B	hypotonic response [GO:0006971]	hit with GO BP
GN017100	Chromosome_3A	2106	1	45	45.2991452991453	0.41785714285714287	87.73885350318471	45	1	87.73885350318471	45	1	NA	NA	NA	74.70997679814386	25	0.88	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017101	Chromosome_3A	3515	2	116	37.86628733997155	0.9247692272799437	0.5355648535564853	116	0	0.19940179461615154	26	0	0.6033789219629928	90	0	0.6228912535686478	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017102	Chromosome_3A	1908	2	105	46.9601677148847	0.9982062780269059	1.0909090909090908	73	0	1.0909090909090908	73	0	NA	NA	NA	0.9237875288683602	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017707	Chromosome_3A	556	2	10	27.87769784172662	0.9288339458737053	0.4106776180698152	9	0	0.4424778761061947	8	0	0	1	0	0.4626060138781804	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017111	Chromosome_3A	17943	14	290	36.554645265563174	0.484127125901132	83.73801265047949	280	0.9785714285714285	93.06791569086651	45	1	82.59774457610625	235	0.9744680851063829	25.398058252427184	35	0.22857142857142856	methylated (>=50%)	Q9P2P6	StAR-related lipid transfer protein 9 (START domain-containing protein 9) (StARD9)	microtubule-based movement [GO:0007018]; spindle assembly [GO:0051225]	hit with GO BP
GN017110	Chromosome_3A	22254	22	323	36.110362182079626	0.4510200881592295	84.09812278951664	322	0.9503105590062112	76.82795698924731	72	0.8472222222222222	85.57325188174975	250	0.98	0.5747126436781609	59	0	methylated (>=50%)	P20585	DNA mismatch repair protein Msh3 (hMSH3) (Divergent upstream protein) (DUP) (Mismatch repair protein 1) (MRP1)	DNA repair [GO:0006281]; maintenance of DNA repeat elements [GO:0043570]; mismatch repair [GO:0006298]; mitotic recombination [GO:0006312]; negative regulation of DNA recombination [GO:0045910]; somatic recombination of immunoglobulin gene segments [GO:0016447]	hit with GO BP
GN017109	Chromosome_3A	270	1	15	50.370370370370374	0.8852459016393442	75.86206896551724	15	0.9333333333333333	75.86206896551724	15	0.9333333333333333	NA	NA	NA	14.44557477110885	66	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017108	Chromosome_3A	6010	7	60	35.75707154742096	0.31503079543965407	88.24489795918367	60	0.9666666666666667	92.10526315789474	11	1	87.59147311485842	49	0.9591836734693877	85.73240329740013	27	1	methylated (>=50%)	Q8CE96	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (mRNA methyladenosine-N(1)-methyltransferase non-catalytic subunit TRM6) (tRNA(m1A58)-methyltransferase subunit TRM6) (tRNA(m1A58)MTase subunit TRM6)	mRNA processing [GO:0006397]; tRNA methylation [GO:0030488]	hit with GO BP
GN017107	Chromosome_3A	273	1	9	45.78754578754579	0.7048192771084337	67.51918158567774	9	1	67.51918158567774	9	1	NA	NA	NA	80.30919446704638	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017106	Chromosome_3A	3587	3	68	34.95957624756063	0.6205487641993055	80.03857280617164	53	0.8490566037735849	53.02114803625378	12	0.5	87.34177215189874	41	0.9512195121951219	59.107961650687784	35	0.5428571428571428	methylated (>=50%)	Q8CE96	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (mRNA methyladenosine-N(1)-methyltransferase non-catalytic subunit TRM6) (tRNA(m1A58)-methyltransferase subunit TRM6) (tRNA(m1A58)MTase subunit TRM6)	mRNA processing [GO:0006397]; tRNA methylation [GO:0030488]	hit with GO BP
GN017105	Chromosome_3A	693	1	9	38.38383838383838	0.3538723404255319	84.60144927536231	9	0.8888888888888888	84.60144927536231	9	0.8888888888888888	NA	NA	NA	48.90595009596929	41	0.43902439024390244	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017104	Chromosome_3A	681	1	22	41.99706314243759	0.7765510807028456	3.095558546433378	22	0	3.095558546433378	22	0	NA	NA	NA	3.0791788856304985	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017103	Chromosome_3A	363	1	8	51.239669421487605	0.3405253283302064	15.384615384615385	7	0	15.384615384615385	7	0	NA	NA	NA	0.35881865857024564	72	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017113	Chromosome_3A	22995	10	287	34.333550771906935	0.4308939601921757	87.28479465043166	287	0.975609756097561	95.36290322580645	33	1	86.63683898442133	254	0.9724409448818898	67.4342105263158	12	0.9166666666666666	methylated (>=50%)	Q01314	RAC-alpha serine/threonine-protein kinase (EC 2.7.11.1) (Protein kinase B) (PKB) (Protein kinase B alpha) (PKB alpha) (RAC-PK-alpha)	cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to growth factor stimulus [GO:0071363]; cellular response to insulin stimulus [GO:0032869]; negative regulation of cilium assembly [GO:1902018]; negative regulation of protein localization to lysosome [GO:0150033]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of TORC1 signaling [GO:1904263]; regulation of apoptotic process [GO:0042981]; regulation of cell migration [GO:0030334]; regulation of neuron projection development [GO:0010975]; response to growth factor [GO:0070848]; response to growth hormone [GO:0060416]; response to insulin-like growth factor stimulus [GO:1990418]; response to peptide hormone [GO:0043434]	hit with GO BP
GN017112	Chromosome_3A	11948	7	347	36.28222296618681	0.8884413538909901	3.9592554417025405	319	0.009404388714733543	3.0632411067193677	53	0.05660377358490566	4.084594650632386	266	0	0.4487658937920718	58	0	unmethylated (<10%)	Q9CW42	Mitochondrial amidoxime-reducing component 1 (mARC1) (EC 1.7.-.-) (Molybdenum cofactor sulfurase C-terminal domain-containing protein 1) (MOSC domain-containing protein 1) (Moco sulfurase C-terminal domain-containing protein 1)	cellular detoxification of nitrogen compound [GO:0070458]; nitrate metabolic process [GO:0042126]; nitric oxide biosynthetic process [GO:0006809]	hit with GO BP
GN017125	Chromosome_3A	1191	1	29	44.66834592779177	0.4915044398907104	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017124	Chromosome_3A	1191	1	29	44.75230898404702	0.4894982993197279	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017128	Chromosome_3A	1191	1	29	44.66834592779177	0.4915044398907104	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9090909090909091	4	0	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017129	Chromosome_3A	1191	1	29	44.75230898404702	0.48980373248624426	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7751937984496124	8	0	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017123	Chromosome_3A	1224	1	30	45.1797385620915	0.48441993614944195	0.8207934336525308	20	0	0.8207934336525308	20	0	NA	NA	NA	0.45377197958026094	22	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017121	Chromosome_3A	1224	1	32	45.42483660130719	0.5131873747101136	1.4322916666666667	28	0	1.4322916666666667	28	0	NA	NA	NA	0.4985754985754986	23	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017115	Chromosome_3A	1191	1	28	44.500419815281276	0.477593984962406	1.6129032258064515	16	0	1.6129032258064515	16	0	NA	NA	NA	1.2021371326803205	23	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017116	Chromosome_3A	1224	1	33	45.09803921568628	0.5349933774834437	1.0482180293501049	17	0	1.0482180293501049	17	0	NA	NA	NA	0.7263922518159807	21	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017126	Chromosome_3A	1224	1	32	45.26143790849673	0.5153684210526316	0.205761316872428	24	0	0.205761316872428	24	0	NA	NA	NA	0.46296296296296297	22	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017117	Chromosome_3A	1224	1	30	44.93464052287582	0.4899331545450907	0	21	0	0	21	0	NA	NA	NA	0.22918258212375858	16	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017120	Chromosome_3A	444	1	13	45.4954954954955	0.5660488378934981	0	1	0	0	1	0	NA	NA	NA	0.3694581280788177	23	0	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017119	Chromosome_3A	708	2	16	46.045197740113	0.43749275866064186	0	13	0	0	13	0	NA	NA	NA	1.2100677637947725	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017114	Chromosome_3A	1191	1	30	45.00419815281276	0.5014877610599596	0.5988023952095808	15	0	0.5988023952095808	15	0	NA	NA	NA	0.27816411682892905	18	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017127	Chromosome_3A	1191	1	30	44.416456759026026	0.5144412128891065	0	9	0	0	9	0	NA	NA	NA	0.8048289738430584	15	0	unmethylated (<10%)	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017130	Chromosome_3A	33244	9	507	35.070990253880396	0.4961551796583862	74.091038204800455	504	0.8035714285714286	86.86644469108398	65	0.9692307692307692	72.73477082596914	439	0.7790432801822323	45.92391304347826	16	0.5	methylated (>=50%)	P27987	Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol 1,4,5-trisphosphate 3-kinase B) (IP3 3-kinase B) (IP3K B) (InsP 3-kinase B)	cellular response to calcium ion [GO:0071277]; inositol phosphate biosynthetic process [GO:0032958]; inositol phosphate metabolic process [GO:0043647]; inositol trisphosphate metabolic process [GO:0032957]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; signal transduction [GO:0007165]	hit with GO BP
GN017131	Chromosome_3A	10212	11	215	34.890325107716414	0.6975276872343265	0.5948788688680059	214	0	0.3831417624521073	75	0	0.6732018424471478	139	0	0.5960264900662252	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017132	Chromosome_3A	6755	11	208	37.48334566987417	0.8771325262695273	0.48602673147023084	208	0	0.4014720642355303	73	0	0.5227239727021925	135	0	0.6142506142506142	47	0	unmethylated (<10%)	Q0VAA2	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN017133	Chromosome_3A	1168	3	42	40.1541095890411	0.8929988713729202	0.6477329347284504	42	0	0.5927180355630821	27	0	0.7263922518159807	15	0	0.45482110369921164	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017134	Chromosome_3A	9340	13	226	36.33832976445396	0.7345309659066195	1.1298334469660076	222	0	0.8191349934469201	64	0	1.2612612612612613	158	0	0.5117998294000569	50	0	unmethylated (<10%)	P26221	Endoglucanase E-4 (EC 3.2.1.4) (Cellulase E-4) (Cellulase E4) (Endo-1,4-beta-glucanase E-4)	cellulose catabolic process [GO:0030245]	hit with GO BP
GN017135	Chromosome_3A	14666	8	487	36.035728896768035	1.0228469758432355	0.662531122082964	487	0	0.6340579710144928	82	0	0.6671572234486142	405	0	0.5414185165132648	29	0	unmethylated (<10%)	Q99PJ0	Neurotrimin	heterophilic cell-cell adhesion [GO:0007157]; negative regulation of glial cell proliferation [GO:0060253]; negative regulation of neuron projection development [GO:0010977]; positive regulation of neuron projection development [GO:0010976]; positive regulation of Schwann cell migration [GO:1900149]; regulation of synapse assembly [GO:0051963]	hit with GO BP
GN017136	Chromosome_3A	8023	9	236	37.828742365698616	0.8222735827998232	0.5466052934407365	236	0	0.49674014281279105	78	0	0.5688913556264743	158	0	0.4533678756476684	26	0	unmethylated (<10%)	A0A3Q2HW92	Major facilitator superfamily domain-containing protein 12	alternative mRNA splicing, via spliceosome [GO:0000380]; carbohydrate transport [GO:0008643]; L-cysteine transmembrane transport [GO:1903712]; negative regulation of melanin biosynthetic process [GO:0048022]; pigment metabolic process involved in pigmentation [GO:0043474]	hit with GO BP
GN017137	Chromosome_3A	545	2	14	44.03669724770642	0.5371726274288933	0	1	0	0	1	0	NA	NA	NA	0.7368877329865626	50	0	NA	P31795	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4); Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; establishment of integrated proviral latency [GO:0075713]; symbiont entry into host cell [GO:0046718]; viral genome integration into host DNA [GO:0044826]	hit with GO BP
GN017138	Chromosome_3A	10856	4	325	37.43551952837141	0.8545044094820393	1.1021307861866274	325	0	0.7338413773638159	76	0	1.20415982484948	249	0	1.3909011880614315	56	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN017139	Chromosome_3A	34976	11	254	28.782593778591036	0.37289017182850626	0.5624824224242992	254	0	0.5188815220524647	96	0	0.5834954153931647	158	0	0.6163328197226502	68	0	unmethylated (<10%)	F1NZI4	Protein-glucosylgalactosylhydroxylysine glucosidase (EC 3.2.1.107) (Acid trehalase-like protein 1)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN017140	Chromosome_3A	189	1	6	40.74074074074074	0.7756497948016415	1.0135135135135136	6	0	1.0135135135135136	6	0	NA	NA	NA	0.43137254901960786	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017141	Chromosome_3A	1053	1	32	38.27160493827161	0.8299098566573075	0.5722460658082976	32	0	0.5722460658082976	32	0	NA	NA	NA	0.4308487720809996	45	0	unmethylated (<10%)	Q7T3S3	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4ST-1) (C4ST1) (zC4ST-1)	carbohydrate biosynthetic process [GO:0016051]; chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; motor neuron axon guidance [GO:0008045]; muscle organ development [GO:0007517]; proteoglycan biosynthetic process [GO:0030166]	hit with GO BP
GN017142	Chromosome_3A	516	1	9	37.4031007751938	0.5072083879423329	0.6359300476947536	9	0	0.6359300476947536	9	0	NA	NA	NA	0.6928406466512702	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017143	Chromosome_3A	663	1	34	46.30467571644042	0.9620998719590269	0.7028753993610224	34	0	0.7028753993610224	34	0	NA	NA	NA	0.5008944543828264	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002432	Chromosome_3A	246	1	4	48.78048780487805	0.2847222222222222	0.4878048780487805	4	0	0.4878048780487805	4	0	NA	NA	NA	0.36663611365719523	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002431	Chromosome_3A	309	1	9	40.45307443365696	0.7585924713584288	0.10741138560687433	9	0	0.10741138560687433	9	0	NA	NA	NA	0.6201550387596899	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017144	Chromosome_3A	17564	13	183	35.800501024823504	0.32733949812612023	66.63890912876028	183	0.73224043715847	73.84976525821597	43	0.813953488372093	64.58472649458339	140	0.7071428571428572	1.037344398340249	24	0	methylated (>=50%)	P81178	Aldehyde dehydrogenase, mitochondrial (EC 1.2.1.19) (EC 1.2.1.24) (EC 1.2.1.3) (EC 1.2.1.36) (EC 1.2.1.46) (ALDH class 2) (ALDH-2) (ALDH-E2) (ALDH1) (Nitroglycerin reductase ALDH2) (EC 1.7.1.-)	aldehyde catabolic process [GO:0046185]; ethanol catabolic process [GO:0006068]	hit with GO BP
GN017151	Chromosome_3A	405	1	24	50.123456790123456	0.9440559440559441	0	24	0	0	24	0	NA	NA	NA	15.305890379804412	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017150	Chromosome_3A	10353	25	275	35.03332367429731	0.8666256549745802	67.6613530326594	206	0.8932038834951457	69.22648859209794	97	0.8762886597938144	66.82103376157754	109	0.908256880733945	71.45650048875855	51	0.7450980392156863	methylated (>=50%)	Q9WU06	Advillin (Peripheral nervous system villin-like protein) (Pervin)	actin filament organization [GO:0007015]; actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; cilium assembly [GO:0060271]; nervous system development [GO:0007399]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of neuron projection development [GO:0010976]; regulation of diacylglycerol biosynthetic process [GO:1900480]	hit with GO BP
GN017149	Chromosome_3A	26068	34	330	36.18612858677305	0.38716088587889175	85.08973543938579	317	0.9242902208201893	89.41852603110209	60	0.95	84.3576696586816	257	0.9182879377431906	73.45575959933223	21	0.8095238095238095	methylated (>=50%)	Q6DFB8	Tetratricopeptide repeat protein 37 (TPR repeat protein 37) (Thespin homolog)	RNA catabolic process [GO:0006401]	hit with GO BP
GN017148	Chromosome_3A	671	2	7	36.0655737704918	0.33896225734285923	92.25352112676056	7	1	92.5	6	1	90.9090909090909	1	1	89.3760539629005	16	1	methylated (>=50%)	Q6PGP7	Superkiller complex protein 3 (Ski3) (Tetratricopeptide repeat protein 37) (TPR repeat protein 37) (Tricho-hepatic-enteric syndrome protein) (Thespin)	nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay [GO:0070478]; rescue of stalled cytosolic ribosome [GO:0072344]	hit with GO BP
GN017147	Chromosome_3A	10255	9	280	35.260848366650414	0.8784115538927239	0.5627009646302251	280	0	0.31926214969847466	62	0	0.6140942110387179	218	0	0.4191895668374476	57	0	unmethylated (<10%)	Q9TU53	Cubilin	NA	hit, no GO BP
GN017146	Chromosome_3A	1040	2	23	36.63461538461539	0.6596800882515168	0.547945205479452	23	0	0.599250936329588	21	0	0	2	0	0.49730625777041026	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017145	Chromosome_3A	3283	3	90	36.03411513859275	0.8457319830779183	0.6538704914574984	90	0	0.6829268292682927	29	0	0.6458557588805167	61	0	0.5034053893988747	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017175	Chromosome_3A	17504	7	274	37.248628884826324	0.45280879813676117	84.07731247123792	221	0.8642533936651584	76.44090305444887	80	0.7375	87.17782810309501	141	0.9361702127659575	1.1330255979857322	52	0	methylated (>=50%)	Q86VZ4	Low-density lipoprotein receptor-related protein 11 (LRP-11)	multicellular organismal response to stress [GO:0033555]; response to cold [GO:0009409]; response to heat [GO:0009408]; response to immobilization stress [GO:0035902]; response to mechanical stimulus [GO:0009612]; response to starvation [GO:0042594]; response to water deprivation [GO:0009414]	hit with GO BP
GN017174	Chromosome_3A	12457	4	184	34.63113109095288	0.4970438734972156	50.42253521126761	183	0.5136612021857924	65.822275834338555	31	0.6774193548387096	46.9417431609561	152	0.48026315789473684	0.7882882882882883	49	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017171	Chromosome_3A	961	3	8	36.31633714880333	0.2537796263286459	77.60532150776054	8	0.875	98.1981981981982	3	1	70.88235294117646	5	0.8	92.45283018867924	19	1	methylated (>=50%)	Q9GZY0	Nuclear RNA export factor 2 (Cancer/testis antigen 39) (CT39) (TAP-like protein 2) (TAPL-2)	mRNA export from nucleus [GO:0006406]; poly(A)+ mRNA export from nucleus [GO:0016973]; RNA transport [GO:0050658]	hit with GO BP
GN017170	Chromosome_3A	28270	17	534	34.934559603820304	0.6192850345993082	85.00412116216773	335	0.9134328358208955	78.79714576962283	72	0.8333333333333334	86.57670454545455	263	0.935361216730038	37.475214805023136	27	0.4444444444444444	methylated (>=50%)	Q5XIW8	U4/U6.U5 tri-snRNP-associated protein 1 (Squamous cell carcinoma antigen recognized by T-cells 1) (SART-1) (rSART-1)	maturation of 5S rRNA [GO:0000481]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of cytotoxic T cell differentiation [GO:0045585]	hit with GO BP
GN017169	Chromosome_3A	22757	12	347	36.05923452124621	0.4690852418429639	83.11414119199472	342	0.8918128654970761	92.55698005698005	60	1	81.78350981080945	282	0.8687943262411347	86.90205011389521	26	0.9230769230769231	methylated (>=50%)	Q58CV6	Kelch domain-containing protein 3	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN017168	Chromosome_3A	4875	9	174	41.21025641025641	0.8409522166637916	1.2249245517486242	169	0	1.5985790408525755	102	0	0.8516678495386799	67	0	0.9164121077478479	58	0	unmethylated (<10%)	G5EFL9	PAS domain-containing protein cky-1 (CKY homolog) (bHLH-PAS transcription factor cky-1)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017167	Chromosome_3A	32892	13	673	36.17901009363979	0.6280434000846893	41.76319991888672	668	0.36676646706586824	55.28957528957529	26	0.5769230769230769	41.3041199287137	642	0.3582554517133956	0.5380200860832137	42	0	sparse (10-50%)	Q7RYW6	Cysteine synthase 1 (CS 1) (EC 2.5.1.-) (EC 2.5.1.47) (O-acetylserine (thiol)-lyase 1) (OAS-TL 1) (O-acetylserine sulfhydrylase 1) (O-succinylserine sulfhydrylase)	NA	hit, no GO BP
GN017166	Chromosome_3A	7560	16	80	37.31481481481482	0.31439119455138437	71.00536505714952	79	0.7468354430379747	64.79217603911981	43	0.627906976744186	76.67261373773417	36	0.8888888888888888	3.173449612403101	53	0	methylated (>=50%)	Q3LXA3	Triokinase/FMN cyclase (Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)) [Includes: ATP-dependent dihydroxyacetone kinase (DHA kinase) (EC 2.7.1.28) (EC 2.7.1.29) (Glycerone kinase) (Triokinase) (Triose kinase); FAD-AMP lyase (cyclizing) (EC 4.6.1.15) (FAD-AMP lyase (cyclic FMN forming)) (FMN cyclase)]	carbohydrate metabolic process [GO:0005975]; carbohydrate phosphorylation [GO:0046835]; fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate [GO:0061624]; glycerol catabolic process [GO:0019563]; negative regulation of MDA-5 signaling pathway [GO:0039534]; regulation of innate immune response [GO:0045088]	hit with GO BP
GN017165	Chromosome_3A	13032	16	345	37.69183548189073	0.7597624208897658	0.8788909233586188	335	0	0.5644402634054563	92	0	0.9688488192155016	243	0	1.018047200370199	37	0	unmethylated (<10%)	Q3LXA3	Triokinase/FMN cyclase (Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)) [Includes: ATP-dependent dihydroxyacetone kinase (DHA kinase) (EC 2.7.1.28) (EC 2.7.1.29) (Glycerone kinase) (Triokinase) (Triose kinase); FAD-AMP lyase (cyclizing) (EC 4.6.1.15) (FAD-AMP lyase (cyclic FMN forming)) (FMN cyclase)]	carbohydrate metabolic process [GO:0005975]; carbohydrate phosphorylation [GO:0046835]; fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate [GO:0061624]; glycerol catabolic process [GO:0019563]; negative regulation of MDA-5 signaling pathway [GO:0039534]; regulation of innate immune response [GO:0045088]	hit with GO BP
GN017164	Chromosome_3A	6544	4	195	36.506723716381416	0.8943913403674625	0.7791714177118966	195	0	0.7712082262210797	29	0	0.7805530776092774	166	0	0.718803910293272	52	0	unmethylated (<10%)	Q9IAL1	Visual system homeobox 2 (Ceh-10 homeodomain-containing homolog) (Homeobox protein CHX10)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN017163	Chromosome_3A	487	2	17	42.50513347022587	0.779420071549614	0.18281535648994515	17	0	0.18281535648994515	17	0	NA	NA	NA	0.5255985984037376	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017162	Chromosome_3A	11586	5	321	34.9646124633178	0.9076440535755861	0.585406648546937	321	0	0.5271828665568369	67	0	0.5963844194570417	254	0	0.3204394598306249	69	0	unmethylated (<10%)	P58304	Visual system homeobox 2 (Ceh-10 homeodomain-containing homolog) (Homeobox protein CHX10)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017157	Chromosome_3A	636	1	9	38.20754716981132	0.3878048780487805	14.414414414414415	9	0.1111111111111111	14.414414414414415	9	0.1111111111111111	NA	NA	NA	1.124132982540062	71	0	sparse (10-50%)	Q6DI51	Nucleoside diphosphate kinase 6, mitochondrial (NDK6) (NDP kinase 6) (EC 2.7.4.6)	CTP biosynthetic process [GO:0006241]; GTP biosynthetic process [GO:0006183]; negative regulation of cell growth [GO:0030308]; negative regulation of mitotic nuclear division [GO:0045839]; nucleotide metabolic process [GO:0009117]; pyrimidine ribonucleotide salvage [GO:0010138]; UTP biosynthetic process [GO:0006228]	hit with GO BP
GN017156	Chromosome_3A	5292	4	79	35.770975056689345	0.46779456193353475	92.69764634882317	79	0.9746835443037974	91.56862745098039	8	1	92.82672046626317	71	0.971830985915493	95.47840129188535	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017155	Chromosome_3A	11664	5	155	37.93724279835391	0.37039085749687467	82.57203092059031	121	0.9008264462809917	65.6	23	0.782608695652174	86.18925831202046	98	0.9285714285714286	66.49269311064718	43	0.6976744186046512	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017154	Chromosome_3A	11712	8	83	34.75922131147541	0.23660732757970226	80.78333011769246	83	0.9518072289156626	82.95819935691318	14	1	80.48673536505153	69	0.9420289855072463	57.7739281074058	31	0.6451612903225806	methylated (>=50%)	O77237	Protein pellino	innate immune response [GO:0045087]; negative regulation of antifungal innate immune response [GO:1905035]; negative regulation of defense response to bacterium [GO:1900425]; negative regulation of Toll signaling pathway [GO:0045751]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of Toll signaling pathway [GO:0045752]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN017153	Chromosome_3A	1708	5	21	37.412177985948475	0.35527645159373206	92.45107176141659	21	1	93.9218523878437	15	1	89.79057591623037	6	1	27.482993197278912	29	0.3448275862068966	methylated (>=50%)	A0A0G2L7I0	DNA-dependent metalloprotease SPRTN (EC 3.4.24.-) (Protein with SprT-like domain at the N terminus) (Spartan)	DNA damage response [GO:0006974]; protein autoprocessing [GO:0016540]; protein-DNA covalent cross-linking repair [GO:0106300]; proteolysis [GO:0006508]	hit with GO BP
GN017152	Chromosome_3A	11155	7	107	35.05154639175258	0.3134723088539444	85.55399719495091	106	0.9811320754716981	84.79595521849043	51	0.9803921568627451	86.12938596491227	55	0.9818181818181818	81.71368861024034	26	0.8846153846153846	methylated (>=50%)	Q8IMC6	Tau-tubulin kinase homolog Asator (EC 2.7.11.1)	NA	hit, no GO BP
GN017185	Chromosome_3A	4688	6	53	33.553754266211605	0.40301567528288174	81.2518366147517	53	1	81.104033970276	9	1	81.2755798090041	44	1	90.08480104370516	27	1	methylated (>=50%)	Q32L99	Prostaglandin reductase 2 (PRG-2) (EC 1.3.1.48) (15-oxoprostaglandin 13-reductase)	prostaglandin metabolic process [GO:0006693]	hit with GO BP
GN017184	Chromosome_3A	14141	12	96	34.91266529948377	0.2241907547670856	75.95238095238095	96	0.8229166666666666	69.31818181818181	15	0.6666666666666666	77.40464344941957	81	0.8518518518518519	34.78260869565217	19	0.3157894736842105	methylated (>=50%)	Q9NZM5	Ribosome biogenesis protein NOP53 (Glioma tumor suppressor candidate region gene 2 protein) (Protein interacting with carboxyl terminus 1) (PICT-1) (p60)	cellular response to hypoxia [GO:0071456]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein-containing complex assembly [GO:0031333]; negative regulation of signal transduction by p53 class mediator [GO:1901797]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901837]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein K63-linked deubiquitination [GO:1903006]; protein localization to nucleolus [GO:1902570]; protein localization to nucleoplasm [GO:1990173]; protein stabilization [GO:0050821]; regulation of aerobic respiration [GO:1903715]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of protein phosphorylation [GO:0001932]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of signal transduction by p53 class mediator [GO:1901796]; ribosomal large subunit assembly [GO:0000027]	hit with GO BP
GN017183	Chromosome_3A	23758	28	224	34.19058843336981	0.32551754847936015	76.453139345999	224	0.8526785714285714	87.82403770620581	51	0.9607843137254902	73.96021699819168	173	0.8208092485549133	33.00339366515837	54	0.46296296296296297	methylated (>=50%)	Q9Y4D1	Disheveled-associated activator of morphogenesis 1	presynaptic actin cytoskeleton organization [GO:0099140]; Wnt signaling pathway, planar cell polarity pathway [GO:0060071]	hit with GO BP
GN017182	Chromosome_3A	16268	13	180	35.52987460044259	0.35339391466453685	66.83635274741728	144	0.5486111111111112	63.64410387398893	52	0.4807692307692308	68.56812933025404	92	0.5869565217391305	8.313817330210773	46	0	methylated (>=50%)	Q9BX10	GTP-binding protein 2	translational elongation [GO:0006414]	hit with GO BP
GN017181	Chromosome_3A	8703	7	118	35.39009536941285	0.4336366814793796	77.88666917954517	118	0.8813559322033898	55.16528925619835	26	0.5	81.03275640108711	92	0.9891304347826086	24.511610762992998	56	0.16071428571428573	methylated (>=50%)	Q3Y4E2	Selenoprotein N (SePN) (SelN)	calcium ion homeostasis [GO:0055074]; calcium-mediated signaling [GO:0019722]; muscle cell development [GO:0055001]; muscle tissue development [GO:0060537]; regulation of locomotion [GO:0040012]; regulation of ryanodine-sensitive calcium-release channel activity [GO:0060314]; skeletal muscle fiber development [GO:0048741]; swimming behavior [GO:0036269]	hit with GO BP
GN017800	Chromosome_3A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017180	Chromosome_3A	8742	13	77	32.18943033630748	0.3401343288408832	89.40352076568108	77	0.987012987012987	88.23529411764706	15	0.9333333333333333	89.59744918294142	62	1	0	2	0	methylated (>=50%)	Q5E9X5	AP-5 complex subunit mu-1 (Adaptor-related protein complex 5 subunit mu-1) (Mu5)	endosomal transport [GO:0016197]	hit with GO BP
GN017179	Chromosome_3A	7425	3	195	37.225589225589225	0.7581053061480946	30.53823773898587	191	0.27225130890052357	56.01851851851852	17	0.5882352941176471	28.698752228163993	174	0.2413793103448276	0.7846214201647705	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017178	Chromosome_3A	8504	7	103	33.854656632173096	0.42494420834061053	84.2247191011236	103	0.9223300970873787	91.01694915254237	9	1	83.56614626129827	94	0.9148936170212766	40.80105633802817	31	0.5161290322580645	methylated (>=50%)	Q6PWT7	Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone)	removal of superoxide radicals [GO:0019430]	hit with GO BP
GN017177	Chromosome_3A	300	1	2	43.666666666666664	0.14084507042253522	69.0909090909091	2	0.5	69.0909090909091	2	0.5	NA	NA	NA	78.50834151128558	17	0.8235294117647058	NA	NA	NA	NA	no Swiss-Prot hit
GN017191	Chromosome_3A	1386	1	32	38.888888888888886	0.6227114455801416	91.59663865546219	9	1	91.59663865546219	9	1	NA	NA	NA	78.41989758595464	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017190	Chromosome_3A	10420	5	164	35.23992322456814	0.5104963813152971	86.33048737104234	164	0.9085365853658537	79.53667953667954	8	0.875	86.65858661197092	156	0.9102564102564102	51.842503785966684	32	0.53125	methylated (>=50%)	A6H7E2	Cyclin-dependent kinase 2-interacting protein	ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN017189	Chromosome_3A	38587	5	419	35.136185762044214	0.3523017707900323	79.3615159240516	415	0.8939759036144578	76.58045977011494	33	0.8484848484848485	79.51705572742979	382	0.8979057591623036	95.60959135427221	47	1	methylated (>=50%)	Q924S7	Sprouty-related, EVH1 domain-containing protein 2 (Spred-2)	negative regulation of epithelial to mesenchymal transition [GO:0010719]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of intracellular signal transduction [GO:1902532]; negative regulation of lens fiber cell differentiation [GO:1902747]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]	hit with GO BP
GN017192	Chromosome_3A	468	1	11	52.56410256410256	0.34541062801932365	67.27272727272727	4	0.75	67.27272727272727	4	0.75	NA	NA	NA	76.91699604743083	20	0.9	NA	NA	NA	NA	no Swiss-Prot hit
GN017193	Chromosome_3A	870	1	22	44.94252873563219	0.5482041587901701	87.90035587188612	22	1	87.90035587188612	22	1	NA	NA	NA	84.06527477801775	46	0.9782608695652174	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017194	Chromosome_3A	354	1	2	39.548022598870055	0.14523076923076922	31.93717277486911	2	0	31.93717277486911	2	0	NA	NA	NA	62.81481481481482	26	0.7307692307692307	NA	NA	NA	NA	no Swiss-Prot hit
GN017195	Chromosome_3A	849	1	6	39.92932862190813	0.17812434435974545	42.37668161434978	6	0.3333333333333333	42.37668161434978	6	0.3333333333333333	NA	NA	NA	38.498556304138596	14	0.21428571428571427	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017196	Chromosome_3A	574	2	12	36.7595818815331	0.6572519083969466	0	12	0	0	10	0	0	2	0	0.5331302361005331	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017197	Chromosome_3A	2157	1	43	39.452943903569775	0.5130657491508922	0.5338078291814946	43	0	0.5338078291814946	43	0	NA	NA	NA	0.5962059620596206	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017198	Chromosome_3A	4626	5	133	35.624729788153914	0.9061557404090866	0.8454846219826002	132	0	0.7847533632286996	19	0	0.8529371302792681	113	0	0.5774783445620789	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017199	Chromosome_3A	1236	1	53	41.82847896440129	0.9803358175451199	0.5695301376364499	53	0	0.5695301376364499	53	0	NA	NA	NA	0.6218905472636815	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017200	Chromosome_3A	2955	6	72	37.90186125211506	0.6836782894546576	0.67712045616536	70	0	0.74487895716946	61	0	0.45592705167173253	9	0	0.37735849056603776	51	0	unmethylated (<10%)	P05099	Matrilin-1 (Cartilage matrix protein)	NA	hit, no GO BP
GN017201	Chromosome_3A	2603	3	15	34.72915866308106	0.19190221317880893	85.89894242068155	14	1	87.86407766990291	10	1	80.68669527896996	4	1	93.37016574585635	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017202	Chromosome_3A	20205	17	269	34.075723830734965	0.4597586175160738	77.91650217133834	250	0.908	79.98292787025181	34	0.8823529411764706	77.64633669996094	216	0.9120370370370371	2.9553679131483714	46	0	methylated (>=50%)	Q9CS00	Splicing factor Cactin	cellular response to interleukin-1 [GO:0071347]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to tumor necrosis factor [GO:0071356]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of innate immune response [GO:0045824]; negative regulation of interferon-beta production [GO:0032688]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of lipopolysaccharide-mediated signaling pathway [GO:0031665]; negative regulation of protein phosphorylation [GO:0001933]; negative regulation of toll-like receptor signaling pathway [GO:0034122]; negative regulation of tumor necrosis factor production [GO:0032720]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]	hit with GO BP
GN017203	Chromosome_3A	2154	1	39	38.99721448467967	0.4810348381776953	12.20703125	39	0.05128205128205128	12.20703125	39	0.05128205128205128	NA	NA	NA	84.07310704960835	7	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017204	Chromosome_3A	42847	23	600	34.98027866595094	0.4589468554815659	88.10323447349386	547	0.9908592321755028	97.11733658140479	45	1	87.49068837080976	502	0.9900398406374502	92.35580264072273	41	1	methylated (>=50%)	Q5REX3	Zinc finger RNA-binding protein	NA	hit, no GO BP
GN017205	Chromosome_3A	12241	4	209	37.12931950004084	0.49591808568337076	93.15578256110908	209	0.9856459330143541	95.7691303212327	85	1	92.14256784123127	124	0.9758064516129032	37.95341733486063	40	0.45	methylated (>=50%)	Q00657	Chondroitin sulfate proteoglycan 4 (Chondroitin sulfate proteoglycan NG2) (HSN tumor-specific antigen)	glial cell migration [GO:0008347]; intracellular signal transduction [GO:0035556]; negative regulation of neuron projection development [GO:0010977]; nervous system development [GO:0007399]; neuron remodeling [GO:0016322]; platelet-derived growth factor receptor signaling pathway [GO:0048008]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; ruffle assembly [GO:0097178]; signal transduction [GO:0007165]; substrate-dependent cell migration [GO:0006929]	hit with GO BP
GN017206	Chromosome_3A	7809	8	78	36.854911000128055	0.29458005432133155	79.57530036322996	65	0.9384615384615385	87.56708407871199	23	1	75.94473791141812	42	0.9047619047619048	87.88343558282209	28	0.9285714285714286	methylated (>=50%)	A7YSY2	ATPase family gene 2 protein homolog B (EC 3.6.4.10) (AFG2 AAA ATPase homolog B) (Ribosome biogenesis protein SPATA5L1) (Spermatogenesis-associated protein 5-like protein 1)	autophagosome maturation [GO:0097352]; DNA replication [GO:0006260]; mitotic spindle disassembly [GO:0051228]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of ribosome biogenesis [GO:0090069]; retrograde protein transport, ER to cytosol [GO:0030970]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN017207	Chromosome_3A	21397	23	263	35.163808010468756	0.3983074972601107	86.6063138347261	259	0.918918918918919	84.59677419354838	50	0.86	86.9441431670282	209	0.9330143540669856	0.48	36	0	methylated (>=50%)	Q9JME5	AP-3 complex subunit beta-2 (Adaptor protein complex AP-3 subunit beta-2) (Adaptor-related protein complex 3 subunit beta-2) (Beta-3B-adaptin) (Clathrin assembly protein complex 3 beta-2 large chain)	adult locomotory behavior [GO:0008344]; anterograde axonal transport [GO:0008089]; anterograde synaptic vesicle transport [GO:0048490]; clathrin-coated vesicle cargo loading, AP-3-mediated [GO:0035654]; endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; intracellular zinc ion homeostasis [GO:0006882]; protein-containing complex assembly [GO:0065003]; synaptic vesicle coating [GO:0016183]; synaptic vesicle endocytosis [GO:0048488]; synaptic vesicle membrane organization [GO:0048499]; synaptic vesicle recycling [GO:0036465]; vesicle-mediated transport [GO:0016192]; zinc ion import into synaptic vesicle [GO:0099180]	hit with GO BP
GN017208	Chromosome_3A	11456	10	110	33.161662011173185	0.3502002835706334	90.55699004057543	109	0.908256880733945	89.47368421052632	15	0.9333333333333333	90.70678796361092	94	0.9042553191489362	0.5031446540880503	59	0	methylated (>=50%)	Q8K021	Secretory carrier-associated membrane protein 1 (Secretory carrier membrane protein 1)	endocytosis [GO:0006897]; exocytosis [GO:0006887]; protein transport [GO:0015031]	hit with GO BP
GN017209	Chromosome_3A	17522	8	449	36.78803789521744	0.757554599903382	1.3760668873018638	415	0	0.9681881051175657	53	0	1.4186102428468381	362	0	0.5275498241500586	72	0	unmethylated (<10%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN017210	Chromosome_3A	2067	4	56	37.010159651669085	0.7921491336125482	1.0852713178294573	56	0	1.2844036697247707	39	0	0.7407407407407407	17	0	0.9857072449482503	65	0	unmethylated (<10%)	Q562D6	tRNA (adenine(37)-N6)-methyltransferase (EC 2.1.1.-) (tRNA methyltransferase O)	tRNA methylation [GO:0030488]	hit with GO BP
GN017211	Chromosome_3A	354	1	7	45.48022598870057	0.3825254708243285	1.0309278350515463	7	0	1.0309278350515463	7	0	NA	NA	NA	0.7950028392958546	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017212	Chromosome_3A	3256	3	33	35.657248157248155	0.3191455235628531	91.04283859800952	33	1	94.19847328244275	10	1	89.79468599033817	23	1	34.92063492063492	39	0.3333333333333333	methylated (>=50%)	Q562D6	tRNA (adenine(37)-N6)-methyltransferase (EC 2.1.1.-) (tRNA methyltransferase O)	tRNA methylation [GO:0030488]	hit with GO BP
GN017213	Chromosome_3A	32478	32	326	33.7582363446025	0.3525666305314409	77.37383298197307	325	0.8830769230769231	75.62141491395793	52	0.8846153846153846	77.6473514051231	273	0.8827838827838828	74.40329218106996	15	0.8666666666666667	methylated (>=50%)	Q9NVE4	Coiled-coil domain-containing protein 87	positive regulation of acrosome reaction [GO:2000344]; positive regulation of fertilization [GO:1905516]	hit with GO BP
GN017214	Chromosome_3A	3602	7	125	37.89561354802887	0.9686670367071559	1.144270913870419	124	0	0.4800768122899664	47	0	1.4598540145985401	77	0	0.5873715124816447	48	0	unmethylated (<10%)	G5CTG7	Aquaporin-10 (AQP-10)	NA	hit, no GO BP
GN017215	Chromosome_3A	1369	4	30	35.35427319211103	0.7252595888959525	0.6285714285714286	30	0	0.644122383252818	22	0	0.5905511811023622	8	0	14.9519890260631	24	0	unmethylated (<10%)	Q7Z3E1	Protein mono-ADP-ribosyltransferase TIPARP (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 14) (ARTD14) (Poly [ADP-ribose] polymerase 7) (PARP-7) (TCDD-inducible poly [ADP-ribose] polymerase)	negative regulation of gene expression [GO:0010629]; positive regulation of protein catabolic process [GO:0045732]; protein auto-ADP-ribosylation [GO:0070213]; response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904612]	hit with GO BP
GN017216	Chromosome_3A	806	2	21	47.89081885856079	0.4564724919093851	0.7575757575757576	19	0	0.7575757575757576	19	0	NA	NA	NA	1.45	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017217	Chromosome_3A	2398	6	35	33.11092577147623	0.5369355076033343	90.7128169979438	35	1	91.30434782608695	4	1	90.64528445971744	31	1	93.5868754660701	19	1	methylated (>=50%)	Q3SX11	Ribosome biogenesis protein NSA2 homolog (TGF-beta-inducible nuclear protein 1)	maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]	hit with GO BP
GN017218	Chromosome_3A	22347	21	270	36.77003624647604	0.3583300273898408	86.6599253266957	251	0.9960159362549801	88.28571428571429	41	1	86.34250650799554	210	0.9952380952380953	55.67144719687093	45	0.6	methylated (>=50%)	Q8IV33	Uncharacterized protein KIAA0825	NA	hit, no GO BP
GN017219	Chromosome_3A	5441	4	52	34.07461863628009	0.33017009597072333	90.01803968731208	52	1	94.14012738853503	11	1	88.74458874458874	41	1	14.442270058708415	56	0.08928571428571429	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017220	Chromosome_3A	19560	17	167	35.173824130879346	0.2765155545713417	81.7277583348683	165	0.9333333333333333	80.67532467532467	36	0.9444444444444444	81.9545505429307	129	0.9302325581395349	76.65726375176304	35	0.9142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017221	Chromosome_3A	14587	19	125	36.12120381161308	0.26275429182755794	74.35937745637479	124	0.8306451612903226	76.2360446570973	33	0.8181818181818182	73.57142857142857	91	0.8351648351648352	77.04576976421636	21	0.9523809523809523	methylated (>=50%)	Q804S5	E3 ubiquitin-protein ligase mib1 (EC 2.3.2.27) (Protein mind bomb) (RING-type E3 ubiquitin transferase mib1)	anterior lateral line development [GO:0048899]; blood vessel development [GO:0001568]; blood vessel morphogenesis [GO:0048514]; brain development [GO:0007420]; central nervous system development [GO:0007417]; definitive hemopoiesis [GO:0060216]; determination of left/right symmetry [GO:0007368]; developmental pigmentation [GO:0048066]; diencephalon development [GO:0021536]; digestive tract morphogenesis [GO:0048546]; embryonic camera-type eye development [GO:0031076]; embryonic pattern specification [GO:0009880]; endocytosis [GO:0006897]; endothelial cell development [GO:0001885]; epidermal cell differentiation [GO:0009913]; epithelial cell development [GO:0002064]; floor plate formation [GO:0021508]; formation of anatomical boundary [GO:0048859]; generation of neurons [GO:0048699]; glial cell differentiation [GO:0010001]; habenula development [GO:0021986]; hair cell differentiation [GO:0035315]; heart development [GO:0007507]; hematopoietic progenitor cell differentiation [GO:0002244]; hematopoietic stem cell differentiation [GO:0060218]; hemopoiesis [GO:0030097]; hindbrain development [GO:0030902]; inner ear receptor cell differentiation [GO:0060113]; lateral line nerve development [GO:0048892]; melanocyte differentiation [GO:0030318]; neural retina development [GO:0003407]; neurogenesis [GO:0022008]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron fate commitment [GO:0048663]; neuron fate specification [GO:0048665]; Notch signaling pathway [GO:0007219]; notochord cell development [GO:0060035]; notochord development [GO:0030903]; optic cup formation involved in camera-type eye development [GO:0003408]; otic vesicle development [GO:0071599]; pigment cell differentiation [GO:0050931]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of protein ubiquitination [GO:0031398]; posterior lateral line development [GO:0048916]; posterior lateral line neuromast primordium migration [GO:0048920]; pronephric duct development [GO:0039022]; pronephros development [GO:0048793]; protein autoubiquitination [GO:0051865]; protein ubiquitination [GO:0016567]; regulation of glial cell differentiation [GO:0045685]; regulation of neuron differentiation [GO:0045664]; regulation of Notch signaling pathway [GO:0008593]; regulation of receptor internalization [GO:0002090]; regulation of receptor-mediated endocytosis [GO:0048259]; rhombomere boundary formation [GO:0021654]; rhombomere development [GO:0021546]; somitogenesis [GO:0001756]; spinal cord association neuron specification [GO:0021519]; spinal cord development [GO:0021510]; spinal cord motor neuron cell fate specification [GO:0021520]; sprouting angiogenesis [GO:0002040]; taste bud formation [GO:0061195]; trigeminal ganglion development [GO:0061551]; ubiquitin-dependent endocytosis [GO:0070086]; vasculogenesis [GO:0001570]; ventral spinal cord interneuron differentiation [GO:0021514]; ventral spinal cord interneuron specification [GO:0021521]	hit with GO BP
GN017235	Chromosome_3A	573	1	2	54.62478184991274	0.7441558441558441	45.45454545454545	1	0	45.45454545454545	1	0	NA	NA	NA	65.08379888268156	6	0.6666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN017234	Chromosome_3A	19861	14	194	35.411107195005286	0.31348494057019094	73.24321733294985	192	0.7708333333333334	66.40146878824969	56	0.6964285714285714	76.36465168225604	136	0.8014705882352942	26.73403766651355	48	0.020833333333333332	methylated (>=50%)	Q6VVX2	Ceramide transfer protein (CERT) (Collagen type IV alpha-3-binding protein)	ER to Golgi ceramide transport [GO:0035621]	hit with GO BP
GN017233	Chromosome_3A	26095	12	322	34.52002299291052	0.415134456917311	85.51329036606428	322	0.9596273291925466	91.77944862155388	34	0.9705882352941176	84.93837380426784	288	0.9583333333333334	70.57291666666667	40	0.725	methylated (>=50%)	Q9UBT6	DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)	cellular response to UV [GO:0034644]; DNA biosynthetic process [GO:0071897]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; error-prone translesion synthesis [GO:0042276]; nucleotide-excision repair, DNA gap filling [GO:0006297]; translesion synthesis [GO:0019985]	hit with GO BP
GN017232	Chromosome_3A	918	1	23	38.671023965141615	0.670583751508607	1.147227533460803	23	0	1.147227533460803	23	0	NA	NA	NA	2.962962962962963	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017231	Chromosome_3A	2062	4	67	33.41416100872939	1.1645004130211232	1.051122790253225	67	0	0.49504950495049505	21	0	1.2279596977329974	46	0	0.977729494839761	51	0	unmethylated (<10%)	Q8WSR7	Countin-2	aggregation involved in sorocarp development [GO:0031152]; cell-cell adhesion [GO:0098609]	hit with GO BP
GN017230	Chromosome_3A	14382	5	245	35.01599221248783	0.5557745368545526	84.16849015317287	243	0.9135802469135802	54.90196078431372	10	0.5	85.53595968850206	233	0.9313304721030042	0.860655737704918	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017229	Chromosome_3A	4374	7	66	35.57384545038866	0.47701855964467005	38.69711912795224	64	0.359375	44.09660107334526	18	0.5	36.48994515539305	46	0.30434782608695654	6.497858871718488	53	0	sparse (10-50%)	Q05974	Ras-related protein Rab-1A	NA	hit, no GO BP
GN017228	Chromosome_3A	885	1	40	43.389830508474574	0.9730621220450797	0.5879208979155531	40	0	0.5879208979155531	40	0	NA	NA	NA	61.61575562700965	47	0.7446808510638298	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017227	Chromosome_3A	6982	11	74	35.534230879404184	0.33894982680801933	90.22695692450209	74	1	94.57236842105263	21	1	88.52353320438426	53	1	92.65477439664218	16	1	methylated (>=50%)	Q5R7R9	SNW domain-containing protein 1 (Nuclear protein SkiP) (Ski-interacting protein)	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of mRNA splicing, via spliceosome [GO:0048026]; positive regulation of neurogenesis [GO:0050769]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; regulation of retinoic acid receptor signaling pathway [GO:0048385]; regulation of vitamin D receptor signaling pathway [GO:0070562]; retinoic acid receptor signaling pathway [GO:0048384]	hit with GO BP
GN017226	Chromosome_3A	19615	9	239	34.35635992862605	0.41308061671159635	85.52607502287283	238	0.9789915966386554	82.34265734265735	18	0.9444444444444444	85.76486787751622	220	0.9818181818181818	66.903073286052	43	0.6976744186046512	methylated (>=50%)	Q5ZMT7	AarF domain-containing protein kinase 1 (EC 2.7.-.-)	lipid homeostasis [GO:0055088]; mitochondrion organization [GO:0007005]	hit with GO BP
GN017225	Chromosome_3A	2374	2	23	33.90901432181971	0.3371242992269887	80.61056105610561	23	0.9565217391304348	82.68733850129199	16	0.9375	76.94063926940639	7	1	87.36263736263736	23	0.9565217391304348	methylated (>=50%)	L7YAI7	Beta-1,4-glucuronyltransferase 1 (EC 2.4.1.-) (I-beta-1,3-N-acetylglucosaminyltransferase) (N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase) (Poly-N-acetyllactosamine extension enzyme) (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1)	glycoprotein biosynthetic process [GO:0009101]; muscle cell development [GO:0055001]; protein O-linked glycosylation via mannose [GO:0035269]	hit with GO BP
GN017224	Chromosome_3A	8721	5	102	36.38344226579521	0.3549561024427967	80.28413028413028	102	0.9411764705882353	68.98989898989899	15	0.7333333333333333	82.62233375156838	87	0.9770114942528736	66.2874390527049	68	0.5882352941176471	methylated (>=50%)	O42281	Peripherin-2 (CRDS1) (Photoreceptor outer segment membrane glycoprotein 1) (Retinal degeneration slow protein)	protein localization to plasma membrane [GO:0072659]; protein maturation [GO:0051604]; retina development in camera-type eye [GO:0060041]; visual perception [GO:0007601]	hit with GO BP
GN017223	Chromosome_3A	39862	23	496	34.23059555466359	0.426053590705529	84.71879446009117	489	0.9325153374233128	56.37459434399629	38	0.5789473684210527	86.61256349894684	451	0.9623059866962306	50.536864710093056	27	0.4444444444444444	methylated (>=50%)	Q8NBP0	Tetratricopeptide repeat protein 13 (TPR repeat protein 13)	NA	hit, no GO BP
GN017222	Chromosome_3A	11445	7	120	34.451725644386194	0.35474072466912565	83.09906668165974	120	0.9083333333333333	42.32887490165224	17	0.4117647058823529	89.89766465494621	103	0.9902912621359223	0.783289817232376	57	0	methylated (>=50%)	B1WB06	Probable methyltransferase-like protein 24 (EC 2.1.1.-)	NA	hit, no GO BP
GN017238	Chromosome_3A	8333	7	116	35.80943237729509	0.4347600028785262	84.45067926757235	115	0.9391304347826087	86.77563150074295	9	1	84.19413018527628	106	0.9339622641509434	86.27760252365931	15	0.8666666666666667	methylated (>=50%)	P51949	CDK-activating kinase assembly factor MAT1 (CDK7/cyclin-H assembly factor) (Menage a trois) (RING finger protein MAT1) (p35) (p36)	adult heart development [GO:0007512]; DNA repair [GO:0006281]; G1/S transition of mitotic cell cycle [GO:0000082]; negative regulation of apoptotic process [GO:0043066]; nucleotide-excision repair [GO:0006289]; positive regulation of smooth muscle cell proliferation [GO:0048661]; regulation of DNA-templated transcription [GO:0006355]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of transcription by RNA polymerase II [GO:0006357]; response to calcium ion [GO:0051592]; transcription initiation at RNA polymerase II promoter [GO:0006367]; ventricular system development [GO:0021591]	hit with GO BP
GN017237	Chromosome_3A	246	1	6	51.21951219512195	0.37962962962962965	86.62790697674419	6	1	86.62790697674419	6	1	NA	NA	NA	75.83947583947584	18	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017236	Chromosome_3A	1092	1	17	38.18681318681319	0.4376650320633723	88.03418803418803	17	1	88.03418803418803	17	1	NA	NA	NA	43.068002108592516	39	0.41025641025641024	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017239	Chromosome_3A	13537	8	164	35.25153283593115	0.3910380350341734	83.73624213836477	164	0.9207317073170732	54.86725663716814	12	0.75	85.43335761107065	152	0.9342105263157895	59.36059907834101	45	0.6888888888888889	methylated (>=50%)	Q8IWV8	E3 ubiquitin-protein ligase UBR2 (EC 2.3.2.27) (N-recognin-2) (Ubiquitin-protein ligase E3-alpha-2) (Ubiquitin-protein ligase E3-alpha-II)	cellular response to L-leucine [GO:0071233]; heterochromatin formation [GO:0031507]; male meiotic nuclear division [GO:0007140]; negative regulation of TOR signaling [GO:0032007]; positive regulation of T cell receptor signaling pathway [GO:0050862]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; reciprocal meiotic recombination [GO:0007131]; spermatogenesis [GO:0007283]; transposable element silencing [GO:0010526]; ubiquitin-dependent protein catabolic process via the N-end rule pathway [GO:0071596]	hit with GO BP
GN017240	Chromosome_3A	771	1	33	44.87678339818417	0.8519337016574585	0.6510416666666666	33	0	0.6510416666666666	33	0	NA	NA	NA	1.0814249363867685	46	0	unmethylated (<10%)	Q61321	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3)	embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic skeletal system morphogenesis [GO:0048704]; fungiform papilla morphogenesis [GO:0061197]; generation of neurons [GO:0048699]; inner ear morphogenesis [GO:0042472]; male gonad development [GO:0008584]; male sex determination [GO:0030238]; male sex differentiation [GO:0046661]; metanephric mesenchyme development [GO:0072075]; myoblast migration [GO:0051451]; myotome development [GO:0061055]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of satellite cell differentiation [GO:1902725]; olfactory placode formation [GO:0030910]; pharyngeal system development [GO:0060037]; positive regulation of branching involved in ureteric bud morphogenesis [GO:0090190]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of ureteric bud formation [GO:0072107]; protein localization to nucleus [GO:0034504]; regulation of branch elongation involved in ureteric bud branching [GO:0072095]; regulation of epithelial cell proliferation [GO:0050678]; regulation of gene expression [GO:0010468]; regulation of protein localization [GO:0032880]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; regulation of transcription by RNA polymerase II [GO:0006357]; sarcomere organization [GO:0045214]; skeletal muscle fiber differentiation [GO:0098528]; skeletal muscle tissue development [GO:0007519]; thymus development [GO:0048538]; tongue development [GO:0043586]; trigeminal ganglion development [GO:0061551]	hit with GO BP
GN017254	Chromosome_3A	17213	6	196	33.84070179515483	0.3989958839093069	69.52639981079643	196	0.8520408163265306	79.80456026058631	6	0.8333333333333334	69.33638443935926	190	0.8526315789473684	88.01225584067407	33	1	methylated (>=50%)	P95125	Carboxylic ester hydrolase LipN (EC 3.1.1.-)	NA	hit, no GO BP
GN017253	Chromosome_3A	13919	11	167	33.87455995401969	0.4183653450883752	86.94609714945386	166	0.9518072289156626	90.93830334190231	29	1	86.30602782071098	137	0.9416058394160584	90.12269938650307	22	1	methylated (>=50%)	A4IF87	Dihydroxyacetone phosphate acyltransferase (EC 2.3.1.42) (Glycerone-phosphate O-acyltransferase)	ether lipid biosynthetic process [GO:0008611]; glycerophospholipid metabolic process [GO:0006650]	hit with GO BP
GN017252	Chromosome_3A	216	1	3	46.75925925925926	0.38571428571428573	92.26804123711341	3	1	92.26804123711341	3	1	NA	NA	NA	66.38989169675091	46	0.6521739130434783	NA	NA	NA	NA	no Swiss-Prot hit
GN017251	Chromosome_3A	168	1	4	46.42857142857143	0.4970414201183432	2.484472049689441	4	0	2.484472049689441	4	0	NA	NA	NA	15.314861460957179	36	0.2222222222222222	NA	Q96AC1	Fermitin family homolog 2 (Kindlin-2) (Mitogen-inducible gene 2 protein) (MIG-2) (Pleckstrin homology domain-containing family C member 1) (PH domain-containing family C member 1)	adherens junction maintenance [GO:0034334]; cell adhesion [GO:0007155]; cell-matrix adhesion [GO:0007160]; focal adhesion assembly [GO:0048041]; integrin activation [GO:0033622]; integrin-mediated signaling pathway [GO:0007229]; limb development [GO:0060173]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of vascular permeability [GO:0043116]; positive regulation of cell migration [GO:0030335]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of focal adhesion assembly [GO:0051894]; positive regulation of integrin activation [GO:0033625]; positive regulation of mesenchymal stem cell proliferation [GO:1902462]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of Rho protein signal transduction [GO:0035025]; positive regulation of stress fiber assembly [GO:0051496]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; positive regulation of wound healing, spreading of epidermal cells [GO:1903691]; protein localization to cell junction [GO:1902414]; protein localization to membrane [GO:0072657]; regulation of cell morphogenesis [GO:0022604]; substrate adhesion-dependent cell spreading [GO:0034446]; transforming growth factor beta receptor signaling pathway [GO:0007179]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN017250	Chromosome_3A	18733	15	126	35.445470559974375	0.2150522096725288	64.66472303206997	115	0.7043478260869566	69.45121951219512	31	0.8064516129032258	63.160919540229884	84	0.6666666666666666	16.800804828973842	19	0.10526315789473684	methylated (>=50%)	Q9VZI3	Unc-112-related protein (Fermitin-1)	cardiac muscle tissue development [GO:0048738]; cell-matrix adhesion [GO:0007160]; defense response to Gram-negative bacterium [GO:0050829]; integrin-mediated signaling pathway [GO:0007229]	hit with GO BP
GN017249	Chromosome_3A	369	1	7	43.63143631436314	0.4208211143695015	92.64214046822742	7	1	92.64214046822742	7	1	NA	NA	NA	86.21621621621621	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017248	Chromosome_3A	177	1	3	51.9774011299435	0.250945179584121	89.1304347826087	3	1	89.1304347826087	3	1	NA	NA	NA	90.96820809248555	45	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017247	Chromosome_3A	645	1	24	41.08527131782946	0.8909865315989409	0.5286343612334802	24	0	0.5286343612334802	24	0	NA	NA	NA	0.4098360655737705	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017246	Chromosome_3A	636	1	25	41.19496855345912	0.9357344632768362	0.7504690431519699	25	0	0.7504690431519699	25	0	NA	NA	NA	0.42650918635170604	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017245	Chromosome_3A	9154	8	111	34.48765566965261	0.40788051812090453	68.8929219600726	95	0.8421052631578947	62.276785714285715	12	0.8333333333333334	70.17771998266147	83	0.8433734939759037	1.0652463382157125	55	0	methylated (>=50%)	A7S8T5	Coiled-coil domain-containing protein 42 homolog	NA	hit, no GO BP
GN017255	Chromosome_3A	1518	2	21	37.02239789196311	0.40404578120841095	67.36161035226456	18	0.8333333333333334	82.16374269005848	7	1	62.53574833174452	11	0.7272727272727273	59.13021991598715	26	0.8076923076923077	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017256	Chromosome_3A	14862	8	101	35.129861391468175	0.2211037052857953	78.70182555780933	97	0.865979381443299	86.27232142857143	23	0.9565217391304348	77.02032721864154	74	0.8378378378378378	74.01315789473684	18	1	methylated (>=50%)	Q9H4B6	Protein salvador homolog 1 (45 kDa WW domain protein) (hWW45)	apoptotic process [GO:0006915]; hippo signaling [GO:0035329]; negative regulation of cell population proliferation [GO:0008285]; positive regulation of apoptotic process [GO:0043065]; protein stabilization [GO:0050821]	hit with GO BP
GN017257	Chromosome_3A	2918	9	23	37.25154215215901	0.2296851471594798	46.425884123401055	23	0.4782608695652174	54.54545454545455	18	0.5555555555555556	29.908675799086758	5	0.2	21.95945945945946	23	0.17391304347826086	sparse (10-50%)	Q5TD94	Radial spoke head protein 4 homolog A (Radial spoke head-like protein 3)	axoneme assembly [GO:0035082]; cilium movement [GO:0003341]; cilium movement involved in cell motility [GO:0060294]; radial spoke assembly [GO:0062177]	hit with GO BP
GN017258	Chromosome_3A	276	1	3	48.55072463768116	0.18594206153155177	54.23728813559322	3	1	54.23728813559322	3	1	NA	NA	NA	82.68	35	0.8857142857142857	NA	NA	NA	NA	no Swiss-Prot hit
GN017259	Chromosome_3A	40128	8	397	34.531997607655505	0.33278968631259126	73.84011552560447	391	0.7416879795396419	67.55634638196916	35	0.6857142857142857	74.2585205955531	356	0.7471910112359551	47.03030303030303	34	0.35294117647058826	methylated (>=50%)	Q29RQ5	E3 ubiquitin-protein ligase TRIM9 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TRIM9) (Tripartite motif-containing protein 9)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN017260	Chromosome_3A	5112	6	45	33.1377151799687	0.3233260246247259	83.29944815567819	45	0.9555555555555556	83.23412698412699	17	1	83.32648870636551	28	0.9285714285714286	75.1451800232288	13	0.9230769230769231	methylated (>=50%)	A7SMW7	L-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.2)	NA	hit, no GO BP
GN017261	Chromosome_3A	4446	8	40	34.61538461538461	0.30445798808464014	91.96190476190476	40	1	85.42600896860986	10	1	93.29967875172098	30	1	1.7444395987788923	42	0	methylated (>=50%)	Q9Y600	Cysteine sulfinic acid decarboxylase (EC 4.1.1.29) (Aspartate 1-decarboxylase) (EC 4.1.1.11) (Cysteine-sulfinate decarboxylase) (Sulfinoalanine decarboxylase)	L-cysteine catabolic process [GO:0019448]; taurine biosynthetic process [GO:0042412]	hit with GO BP
GN017262	Chromosome_3A	7082	6	69	34.76419090652358	0.32288220427176767	80.64012490241998	69	1	86.82634730538922	9	1	80.05129666571673	60	1	65.64935064935065	24	0.8333333333333334	methylated (>=50%)	Q96BY7	Autophagy-related protein 2 homolog B	autophagy of mitochondrion [GO:0000422]; glycophagy [GO:0061723]; pexophagy [GO:0000425]; piecemeal microautophagy of the nucleus [GO:0034727]; reticulophagy [GO:0061709]	hit with GO BP
GN017263	Chromosome_3A	267	1	7	46.441947565543074	0.49080882352941174	91.96787148594377	7	1	91.96787148594377	7	1	NA	NA	NA	86.61177188167125	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017264	Chromosome_3A	2670	1	31	38.50187265917603	0.3183816656473222	82.27009113504556	31	0.967741935483871	82.27009113504556	31	0.967741935483871	NA	NA	NA	23.63013698630137	9	0	methylated (>=50%)	Q6AXL3	Transforming growth factor beta activator LRRC33 (Leucine-rich repeat-containing protein 33) (Negative regulator of reactive oxygen species)	immune response [GO:0006955]; inflammatory response [GO:0006954]; microglia development [GO:0014005]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]	hit with GO BP
GN017265	Chromosome_3A	3165	2	108	45.023696682464454	0.6824797843665769	73.20072332730561	108	0.9537037037037037	73.04443628351083	107	0.9532710280373832	83.33333333333333	1	1	46.832618025751074	49	0.6530612244897959	methylated (>=50%)	Q22795	Histone-lysine N-methyltransferase set-1 (EC 2.1.1.361)	embryo development ending in birth or egg hatching [GO:0009792]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017266	Chromosome_3A	546	1	25	46.7032967032967	0.8666666666666667	75.89967284623773	25	0.92	75.89967284623773	25	0.92	NA	NA	NA	39.45024179180453	70	0.5142857142857142	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017267	Chromosome_3A	4931	3	58	38.32893936321233	0.32095335033874284	84.97348261638184	40	0.975	81.33802816901408	5	0.8	85.70417551309271	35	1	90.52511415525115	42	1	methylated (>=50%)	Q9Y664	KICSTOR complex protein kaptin (Actin-associated protein 2E4)	actin filament organization [GO:0007015]; cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; negative regulation of TORC1 signaling [GO:1904262]; protein localization to lysosome [GO:0061462]	hit with GO BP
GN017268	Chromosome_3A	3525	4	37	33.04964539007092	0.3867469665160303	65.62734785875281	37	0.6756756756756757	37.32809430255403	10	0.4	72.31769623780771	27	0.7777777777777778	3.500153515505066	64	0	methylated (>=50%)	Q6DDB9	RNA-binding protein PNO1	ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN017269	Chromosome_3A	4408	4	78	35.54900181488203	0.5617433414043583	70.88670770254534	77	0.7662337662337663	52.972972972972975	11	0.6363636363636364	72.70894428152492	66	0.7878787878787878	90.7488986784141	15	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017271	Chromosome_3A	2346	4	54	38.53367433930094	0.6205893158938938	0	10	0	0	10	0	NA	NA	NA	0.5793742757821553	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017272	Chromosome_3A	672	1	24	39.13690476190476	0.9386567337911769	0.6578947368421053	24	0	0.6578947368421053	24	0	NA	NA	NA	0.41866028708133973	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017273	Chromosome_3A	3081	1	107	40.37650113599481	0.8542299888837929	0.5277864017385905	107	0	0.5277864017385905	107	0	NA	NA	NA	0.37343291544411844	61	0	unmethylated (<10%)	H9JW44	Chitin deacetylase 7 (BmCDA7) (EC 3.5.1.41)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN017274	Chromosome_3A	1926	1	52	40.44652128764278	0.6642260246717071	0.5328596802841918	52	0	0.5328596802841918	52	0	NA	NA	NA	0.6008855154965211	50	0	unmethylated (<10%)	H9J9M0	Chitin deacetylase 1 (BmCDA1) (EC 3.5.1.41)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN017275	Chromosome_3A	381	1	14	41.99475065616798	0.838152105593966	0.6024096385542169	14	0	0.6024096385542169	14	0	NA	NA	NA	1.216685979142526	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017281	Chromosome_3A	6504	10	150	36.46986469864699	0.6952521037148526	1.1343804537521816	148	0	0.8607594936708861	44	0	1.244643950214242	104	0	0.529925187032419	53	0	unmethylated (<10%)	P08478	Peptidyl-glycine alpha-amidating monooxygenase A (PAM-A) (Peptide C-terminal alpha-amidating enzyme I) (AE-I) (Peptidyl-glycine alpha-amidating monooxygenase I) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase A (PHM-A) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase A (EC 4.3.2.5) (Peptidylamidoglycolate lyase-A) (PAL-A)]	peptide amidation [GO:0001519]	hit with GO BP
GN017280	Chromosome_3A	1134	1	45	41.358024691358025	0.9286962218825071	0.6993006993006993	45	0	0.6993006993006993	45	0	NA	NA	NA	0.6252605252188412	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017279	Chromosome_3A	270	1	2	47.77777777777778	0.1388888888888889	84.44444444444444	2	1	84.44444444444444	2	1	NA	NA	NA	69.58677685950413	11	0.8181818181818182	NA	NA	NA	NA	no Swiss-Prot hit
GN017278	Chromosome_3A	13799	4	253	37.0099282556707	0.5369792551083942	85.86024448093414	186	0.967741935483871	89.1358024691358	13	1	85.59889676910953	173	0.9653179190751445	93.39542760372565	37	1	methylated (>=50%)	Q4I963	Cofilin (Actin-depolymerizing factor 1)	actin filament depolymerization [GO:0030042]	hit with GO BP
GN017277	Chromosome_3A	7825	5	91	33.968051118210866	0.40409557669771784	88.73689010487917	91	1	94.15094339622641	10	1	88.26252273102992	81	1	90.09265858873842	21	1	methylated (>=50%)	Q9NRW7	Vacuolar protein sorting-associated protein 45 (h-VPS45) (hlVps45)	intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN017276	Chromosome_3A	3712	8	129	38.73922413793103	0.9263196991503784	0.6924198250728864	129	0	0.7378372146645147	107	0	0.5212858384013901	22	0	0.5851555281798583	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017283	Chromosome_3A	5239	4	83	34.72036648215308	0.5264370460048426	65.9846547314578	83	0.7349397590361446	53.3457249070632	9	0.4444444444444444	67.17383700594614	74	0.7702702702702703	44.48240519303041	42	0.4523809523809524	methylated (>=50%)	Q9VFJ2	Large ribosomal subunit protein uL11m (39S ribosomal protein L11, mitochondrial) (L11mt) (MRP-L11)	mitochondrial translation [GO:0032543]; translation [GO:0006412]	hit with GO BP
GN017284	Chromosome_3A	53545	42	477	35.00793724904286	0.29306106946221216	81.3256264490107	475	0.9263157894736842	73.4286178333604	115	0.8695652173913043	83.24516383734702	360	0.9444444444444444	71.13636363636364	44	0.7045454545454546	methylated (>=50%)	Q68DK2	Zinc finger FYVE domain-containing protein 26 (FYVE domain-containing centrosomal protein) (FYVE-CENT) (Spastizin)	autophagosome organization [GO:1905037]; double-strand break repair via homologous recombination [GO:0000724]; lysosomal membrane organization [GO:0097212]; lysosome organization [GO:0007040]; membrane bending [GO:0097753]; mitotic cytokinesis [GO:0000281]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN017285	Chromosome_3A	7831	9	90	33.34184650747031	0.4141735392947432	94.0530519110097	89	1	94.56521739130434	20	1	93.95734597156398	69	1	40.98426784993949	35	0.5428571428571428	methylated (>=50%)	A0A1L8ER70	Centriolar and ciliogenesis-associated protein HYLS1 (Hydrolethalus syndrome protein 1 homolog)	cilium assembly [GO:0060271]	hit with GO BP
GN017286	Chromosome_3A	3636	3	52	34.79097909790979	0.4766913577756824	89.11904167706514	52	0.9807692307692307	92.91044776119404	4	1	88.8472853704199	48	0.9791666666666666	86.08087091757388	17	1	methylated (>=50%)	P62862	Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein (FAU ubiquitin-like and ribosomal protein S30) [Cleaved into: Ubiquitin-like protein FUBI; Small ribosomal subunit protein eS30 (40S ribosomal protein S30)]	antibacterial humoral response [GO:0019731]; antimicrobial humoral immune response mediated by antimicrobial peptide [GO:0061844]; cytoplasmic translation [GO:0002181]; defense response to Gram-positive bacterium [GO:0050830]; innate immune response in mucosa [GO:0002227]; modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; ribosomal small subunit assembly [GO:0000028]	hit with GO BP
GN017287	Chromosome_3A	324	2	3	35.49382716049383	0.29418886198547217	83.4862385321101	3	1	83.4862385321101	3	1	NA	NA	NA	78.08219178082192	9	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017288	Chromosome_3A	25054	8	372	35.82262313403049	0.46316404648493115	87.72994129158512	341	0.9648093841642229	77.45327102803738	17	0.8235294117647058	88.08617477929862	324	0.9722222222222222	62.194269741439555	43	0.6744186046511628	methylated (>=50%)	Q32PI6	Large ribosomal subunit protein uL4m (39S ribosomal protein L4, mitochondrial) (L4mt) (MRP-L4)	positive regulation of Notch signaling pathway [GO:0045747]; regulation of translation [GO:0006417]; translation [GO:0006412]	hit with GO BP
GN017289	Chromosome_3A	948	2	8	33.9662447257384	0.3038461538461538	92.26666666666667	8	1	93.19286871961103	7	1	87.96992481203007	1	1	87.55141805585625	46	0.9130434782608695	methylated (>=50%)	Q14318	Peptidyl-prolyl cis-trans isomerase FKBP8 (PPIase FKBP8) (EC 5.2.1.8) (38 kDa FK506-binding protein) (38 kDa FKBP) (FKBP-38) (hFKBP38) (FK506-binding protein 8) (FKBP-8) (FKBPR38) (Rotamase)	intracellular signal transduction [GO:0035556]; negative regulation of apoptotic process [GO:0043066]; negative regulation of protein phosphorylation [GO:0001933]; protein folding [GO:0006457]; protein localization to mitochondrion [GO:0070585]; regulation of mitophagy [GO:1901524]	hit with GO BP
GN017290	Chromosome_3A	729	1	11	44.8559670781893	0.3148162688442211	95.05409582689336	11	1	95.05409582689336	11	1	NA	NA	NA	95.16209476309227	29	1	methylated (>=50%)	Q05AT9	U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U1 snRNP-binding protein homolog)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN017291	Chromosome_3A	1590	1	72	40.75471698113208	1.0909090909090908	0.9225832330525471	72	0	0.9225832330525471	72	0	NA	NA	NA	0.8468335787923417	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017292	Chromosome_3A	15493	10	359	36.1969921900213	0.7089383285943206	0.7365875109938435	359	0	0.8903278025091056	54	0	0.7124228738629859	305	0	0.9157509157509157	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016524	Chromosome_3A	1299	1	42	40.10777521170131	0.8041209762999646	0.47355958958168903	40	0	0.47355958958168903	40	0	NA	NA	NA	0.7910928801640785	56	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN016523	Chromosome_3A	324	2	4	36.111111111111114	0.38005865102639297	5.825242718446602	4	0	5.825242718446602	4	0	NA	NA	NA	3.484320557491289	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016512	Chromosome_3A	1299	1	45	40.10777521170131	0.8614820054823592	0.36737692872887584	41	0	0.36737692872887584	41	0	NA	NA	NA	3.8095238095238093	61	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015916	Chromosome_3A	403	1	18	46.40198511166253	0.8299771167048055	0.8250825082508251	18	0	0.8250825082508251	18	0	NA	NA	NA	0.5399568034557235	54	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN016522	Chromosome_3A	1923	1	59	39.93759750390016	0.7843716081218415	1.1742100768573869	59	0	1.1742100768573869	59	0	NA	NA	NA	0.31026252983293556	66	0	unmethylated (<10%)	Q13263	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (Nuclear corepressor KAP-1) (RING finger protein 96) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; epithelial to mesenchymal transition [GO:0001837]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN016521	Chromosome_3A	735	1	17	39.04761904761905	0.651256124257271	1.70316301703163	17	0	1.70316301703163	17	0	NA	NA	NA	0.7225433526011561	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017296	Chromosome_3A	18927	5	495	34.247371479896444	0.8919479332528865	2.60409057706355	492	0	0.8586525759577279	31	0	2.706255315858656	461	0	0.6859205776173285	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017297	Chromosome_3A	1092	1	16	39.1025641025641	0.3842364532019704	23.114754098360656	16	0	23.114754098360656	16	0	NA	NA	NA	13.902572523262178	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017298	Chromosome_3A	1014	1	43	47.337278106508876	0.7681953522789338	1.1648745519713262	43	0	1.1648745519713262	43	0	NA	NA	NA	0.7148530579825259	38	0	unmethylated (<10%)	Q99853	Forkhead box protein B1 (Transcription factor FKH-5)	anatomical structure morphogenesis [GO:0009653]; axon target recognition [GO:0007412]; cell differentiation [GO:0030154]; cell migration in diencephalon [GO:0061381]; epithelial cell differentiation involved in mammary gland alveolus development [GO:0061030]; floor plate development [GO:0033504]; hypothalamus cell migration [GO:0021855]; inferior colliculus development [GO:0061379]; lactation [GO:0007595]; mammary gland lobule development [GO:0061377]; mammillary body development [GO:0021767]; mammillothalamic axonal tract development [GO:0061374]; midbrain development [GO:0030901]; negative regulation of neuron apoptotic process [GO:0043524]; regulation of transcription by RNA polymerase II [GO:0006357]; somitogenesis [GO:0001756]; spinal cord development [GO:0021510]; telencephalon cell migration [GO:0022029]; thalamus development [GO:0021794]; urogenital system development [GO:0001655]; visual learning [GO:0008542]	hit with GO BP
GN017299	Chromosome_3A	537	1	9	39.292364990689016	0.4710526315789474	1.0869565217391304	9	0	1.0869565217391304	9	0	NA	NA	NA	5.197132616487456	42	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN002490	Chromosome_3A	385	1	12	51.16883116883117	0.497737556561086	0	12	0	0	12	0	NA	NA	NA	2.2134387351778657	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002491	Chromosome_3A	540	2	17	35.18518518518518	1.026386404293381	0	9	0	0	8	0	0	1	0	0.33975084937712347	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017300	Chromosome_3A	12676	5	154	35.27926790785737	0.3914800667646518	73.2266891180804	153	0.8431372549019608	24.439701173959445	14	0.42857142857142855	78.56392294220666	139	0.8848920863309353	0.7928642220019821	39	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020764	Chromosome_3A	1198	1	29	43.57262103505843	0.5101914943609023	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017338	Chromosome_3A	207	1	3	43.47826086956522	0.4791666666666667	81.27659574468085	3	1	81.27659574468085	3	1	NA	NA	NA	76.68067226890756	15	0.8666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN017337	Chromosome_3A	582	1	13	41.75257731958763	0.5135758892207439	NA	0	NA	NA	NA	NA	NA	NA	NA	24.489795918367346	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017336	Chromosome_3A	1677	1	41	41.97972570065593	0.5550335407938392	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017335	Chromosome_3A	2876	2	54	42.97635605006954	0.4080986979543036	21.21001390820584	20	0	21.480406386066765	16	0	15	4	0	NA	NA	NA	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017334	Chromosome_3A	10164	10	221	35.064935064935064	0.7091305318248531	0.7062026716583	218	0	0.44563279857397503	127	0	1.0555666201951803	91	0	6.872205224758766	49	0	unmethylated (<10%)	Q96F81	Protein dispatched homolog 1	diaphragm development [GO:0060539]; peptide transport [GO:0015833]; regulation of protein secretion [GO:0050708]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN017333	Chromosome_3A	345	1	13	49.85507246376812	0.6147203947368421	1.5151515151515151	13	0	1.5151515151515151	13	0	NA	NA	NA	0.5055368319691863	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017332	Chromosome_3A	1356	1	17	36.65191740412979	0.39600082457225316	70.98092643051771	17	0.8235294117647058	70.98092643051771	17	0.8235294117647058	NA	NA	NA	74.49567723342939	16	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017331	Chromosome_3A	55838	50	602	35.24660625380565	0.3491771765804926	87.41516385495443	600	0.9916666666666667	89.70254449886512	163	1	86.72461050201962	437	0.988558352402746	90.3740036787247	33	1	methylated (>=50%)	M9MRD1	Muscle-specific protein 300 kDa (Nesprin-like protein Msp300)	actin filament organization [GO:0007015]; cell migration [GO:0016477]; endoplasmic reticulum localization [GO:0051643]; female germline ring canal stabilization [GO:0008335]; flight [GO:0060361]; larval visceral muscle development [GO:0007523]; locomotion [GO:0040011]; mesoderm development [GO:0007498]; microtubule anchoring [GO:0034453]; mitochondrion localization [GO:0051646]; nuclear migration [GO:0007097]; nucleus localization [GO:0051647]; nucleus organization [GO:0006997]; ovarian nurse cell to oocyte transport [GO:0007300]	hit with GO BP
GN017330	Chromosome_3A	438	2	5	42.23744292237443	0.2770048064760941	85.92057761732852	5	1	85.92057761732852	5	1	NA	NA	NA	84.16075650118204	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017329	Chromosome_3A	1332	1	26	43.24324324324324	0.4186704384724187	86.16684266103485	26	1	86.16684266103485	26	1	NA	NA	NA	71.55172413793103	14	0.7142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017328	Chromosome_3A	750	1	15	42.266666666666666	0.4562043795620438	80.87248322147651	15	0.8	80.87248322147651	15	0.8	NA	NA	NA	17.23949809056192	56	0.10714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017327	Chromosome_3A	14181	7	87	35.568718708130596	0.19399992735304206	77.87351054078827	87	0.9425287356321839	90.70631970260223	13	1	76.46939190563351	74	0.9324324324324325	83.98692810457516	14	0.9285714285714286	methylated (>=50%)	Q8CEE7	Retinol dehydrogenase 13 (EC 1.1.1.300)	eye photoreceptor cell development [GO:0042462]; response to high light intensity [GO:0009644]; retina layer formation [GO:0010842]; retinal metabolic process [GO:0042574]	hit with GO BP
GN017326	Chromosome_3A	12617	9	172	37.0135531425854	0.403874442052354	79.06631216765717	172	0.9534883720930233	80.01944579484686	58	0.9310344827586207	78.88360823781568	114	0.9649122807017544	10.910058541777541	29	0.06896551724137931	methylated (>=50%)	Q5HZQ9	Pecanex-like protein 4 (Pecanex homolog protein 4)	NA	hit, no GO BP
GN017325	Chromosome_3A	9326	10	101	33.218957752519835	0.3928161542696048	75.85652243847515	98	0.826530612244898	67.05163043478261	26	0.7307692307692307	78.58798735511064	72	0.8611111111111112	25.459825750242015	23	0.391304347826087	methylated (>=50%)	Q9VEC1	Mediator of RNA polymerase II transcription subunit 17 (Mediator complex subunit 17) (dMED17) (dTRAP80)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of transcription initiation by RNA polymerase II [GO:0060260]; sex comb development [GO:0045498]	hit with GO BP
GN017324	Chromosome_3A	2951	2	93	38.22433073534395	0.8630961553581257	1.5645371577574967	93	0	0.8491182233834096	41	0	1.9211983067404754	52	0	0.33419977720014854	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017323	Chromosome_3A	3764	4	42	33.9798087141339	0.38699822275751655	63.4991974317817	42	0.7857142857142857	74.79508196721312	9	0.8888888888888888	61.400837457175484	33	0.7575757575757576	0.8114856429463171	52	0	methylated (>=50%)	Q9SHU5	Probable ADP-ribosylation factor At2g15310	intracellular protein transport [GO:0006886]	hit with GO BP
GN017322	Chromosome_3A	5218	5	67	35.60751245688003	0.40509042538399503	93.46625030026424	65	1	95.25801952580196	24	1	93.09344167150319	41	1	90.5439330543933	19	1	methylated (>=50%)	F1QMB9	Cyclin-K	central nervous system development [GO:0007417]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN017321	Chromosome_3A	27799	15	325	36.41138170437785	0.35308971650467924	71.97690747386488	283	0.8692579505300353	87.94014084507042	20	0.95	70.97451771599138	263	0.8631178707224335	14.081486776268763	28	0.17857142857142858	methylated (>=50%)	Q7SXS7	Actin-histidine N-methyltransferase (EC 2.1.1.85) (Protein-L-histidine N-tele-methyltransferase) (SET domain-containing protein 3)	actin filament organization [GO:0007015]; cell population proliferation [GO:0008283]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell growth [GO:0001558]; regulation of uterine smooth muscle contraction [GO:0070472]	hit with GO BP
GN017320	Chromosome_3A	44213	23	1228	36.25630470676045	0.845164717378908	0.890614295501256	1175	0	0.5284015852047557	144	0	0.9398571257532825	1031	0	2.8265524625267666	34	0	unmethylated (<10%)	P18910	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN017319	Chromosome_3A	788	2	13	37.18274111675127	0.49103633400440994	1.2371134020618557	13	0	1.3333333333333333	12	0	0	1	0	0.8253692441355344	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017318	Chromosome_3A	906	1	27	38.852097130242825	0.7903460308229137	0.32068412613575625	27	0	0.32068412613575625	27	0	NA	NA	NA	5.737704918032787	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017317	Chromosome_3A	1227	1	6	42.86878565607172	0.13214151095794519	0	6	0	0	6	0	NA	NA	NA	1.4285714285714286	1	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017316	Chromosome_3A	1572	1	1	42.23918575063613	0.018576290414066932	1.4285714285714286	1	0	1.4285714285714286	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017310	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017314	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017309	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017312	Chromosome_3A	1050	1	0	44.095238095238095	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017313	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017315	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017311	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017308	Chromosome_3A	1194	1	1	42.88107202680067	0.023687186303489594	0	1	0	0	1	0	NA	NA	NA	5.405405405405405	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017307	Chromosome_3A	1167	1	1	43.01628106255355	0.02413151364764268	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017306	Chromosome_3A	825	1	0	43.63636363636363	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017305	Chromosome_3A	825	1	0	43.75757575757576	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017304	Chromosome_3A	1194	1	1	43.04857621440536	0.02356284411816944	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017303	Chromosome_3A	726	1	23	42.56198347107438	0.6995391705069124	0.7978723404255319	23	0	0.7978723404255319	23	0	NA	NA	NA	1.1954261954261953	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017302	Chromosome_3A	201	1	5	41.29353233830846	0.5836236933797909	0.6535947712418301	5	0	0.6535947712418301	5	0	NA	NA	NA	0.35765379113018597	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020308	Chromosome_3A	168	1	2	37.5	0.3387096774193548	17.037037037037038	2	0	17.037037037037038	2	0	NA	NA	NA	2.830188679245283	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017339	Chromosome_3A	570	1	19	46.14035087719298	0.6289198606271778	0.6147540983606558	19	0	0.6147540983606558	19	0	NA	NA	NA	11.114775725593667	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017340	Chromosome_3A	1471	3	20	32.6988443235894	0.5113498105468071	1.424287856071964	20	0	2.092050209205021	6	0	1.278538812785388	14	0	5.511811023622047	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017341	Chromosome_3A	432	1	3	42.361111111111114	0.15480172001911133	2.73972602739726	3	0	2.73972602739726	3	0	NA	NA	NA	15.615615615615615	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017342	Chromosome_3A	447	1	12	40.49217002237136	0.6638613861386139	2.242152466367713	12	0	2.242152466367713	12	0	NA	NA	NA	6.885998469778118	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017343	Chromosome_3A	1467	1	67	41.85412406271302	1.0558151525893462	0.7037297677691766	67	0	0.7037297677691766	67	0	NA	NA	NA	0.9122006841505131	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017350	Chromosome_3A	9517	3	257	35.17915309446254	0.8728678098302456	0.654711073156846	257	0	0.622568093385214	23	0	0.6579462677214695	234	0	0.7906626506024096	37	0	unmethylated (<10%)	Q9U6A1	Homeobox protein prospero	cell development [GO:0048468]; glial cell differentiation [GO:0010001]	hit with GO BP
GN017349	Chromosome_3A	1959	1	74	44.66564573762123	0.7642500158157778	0.6598240469208211	74	0	0.6598240469208211	74	0	NA	NA	NA	0.5323620061641916	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017348	Chromosome_3A	8820	8	110	35.78231292517007	0.39030819140308193	87.98367346938775	110	0.9818181818181818	90.05524861878453	22	1	87.53720976384203	88	0.9772727272727273	86.3960113960114	21	1	methylated (>=50%)	Q9D2G2	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex component E2) (OGDC-E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (E2K)	2-oxoglutarate decarboxylation to succinyl-CoA [GO:0120551]; 2-oxoglutarate metabolic process [GO:0006103]; alpha-amino acid catabolic process [GO:1901606]; amino acid catabolic process [GO:0009063]; L-lysine catabolic process [GO:0019477]; succinyl-CoA metabolic process [GO:0006104]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN017347	Chromosome_3A	3159	6	41	35.8974358974359	0.40290359107085083	90.6767628963559	41	0.975609756097561	84.61538461538461	12	0.9166666666666666	92.34016887816647	29	1	87.70260747004933	34	1	methylated (>=50%)	Q8NBN7	Retinol dehydrogenase 13 (EC 1.1.1.300) (Short chain dehydrogenase/reductase family 7C member 3)	eye photoreceptor cell development [GO:0042462]; retina layer formation [GO:0010842]; retinal metabolic process [GO:0042574]	hit with GO BP
GN017346	Chromosome_3A	4620	3	55	31.623376623376622	0.4767086280321933	81.50876301752604	52	0.8846153846153846	60	13	0.6923076923076923	87.97489263296994	39	0.9487179487179487	1.4986376021798364	47	0	methylated (>=50%)	Q96NR8	Retinol dehydrogenase 12 (EC 1.1.1.300) (All-trans and 9-cis retinol dehydrogenase) (Short chain dehydrogenase/reductase family 7C member 2)	cellular detoxification of aldehyde [GO:0110095]; photoreceptor cell maintenance [GO:0045494]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; visual perception [GO:0007601]	hit with GO BP
GN017345	Chromosome_3A	888	1	36	41.891891891891895	0.9327731092436975	0.7106598984771574	36	0	0.7106598984771574	36	0	NA	NA	NA	0.35874439461883406	44	0	unmethylated (<10%)	O14672	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (CDw156) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (CD antigen CD156c)	adherens junction organization [GO:0034332]; amyloid precursor protein catabolic process [GO:0042987]; cell-cell signaling [GO:0007267]; cochlea development [GO:0090102]; constitutive protein ectodomain proteolysis [GO:0051089]; epidermal growth factor receptor ligand maturation [GO:0038004]; extracellular matrix disassembly [GO:0022617]; in utero embryonic development [GO:0001701]; integrin-mediated signaling pathway [GO:0007229]; membrane protein ectodomain proteolysis [GO:0006509]; monocyte activation [GO:0042117]; negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]; negative regulation of amyloid-beta formation [GO:1902430]; negative regulation of cell adhesion [GO:0007162]; negative regulation of gene expression [GO:0010629]; Notch signaling pathway [GO:0007219]; pore complex assembly [GO:0046931]; positive regulation of cell growth [GO:0030307]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of T cell chemotaxis [GO:0010820]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; postsynapse organization [GO:0099173]; protein catabolic process at postsynapse [GO:0140249]; protein processing [GO:0016485]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of Notch signaling pathway [GO:0008593]; regulation of postsynapse organization [GO:0099175]; regulation of vasculature development [GO:1901342]; response to tumor necrosis factor [GO:0034612]	hit with GO BP
GN017344	Chromosome_3A	1113	1	46	44.38454627133872	0.8465277777777778	0.5165289256198347	46	0	0.5165289256198347	46	0	NA	NA	NA	0.42602633617350893	70	0	unmethylated (<10%)	O77633	Disintegrin and metalloproteinase domain-containing protein 10 (ADAM 10) (EC 3.4.24.81) (Kuzbanian protein homolog) (Mammalian disintegrin-metalloprotease) (CD antigen CD156c)	adherens junction organization [GO:0034332]; cochlea development [GO:0090102]; constitutive protein ectodomain proteolysis [GO:0051089]; epidermal growth factor receptor ligand maturation [GO:0038004]; in utero embryonic development [GO:0001701]; membrane protein ectodomain proteolysis [GO:0006509]; monocyte activation [GO:0042117]; negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]; negative regulation of amyloid-beta formation [GO:1902430]; negative regulation of cell adhesion [GO:0007162]; Notch signaling pathway [GO:0007219]; pore complex assembly [GO:0046931]; positive regulation of cell growth [GO:0030307]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of T cell chemotaxis [GO:0010820]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; postsynapse organization [GO:0099173]; protein catabolic process at postsynapse [GO:0140249]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of Notch signaling pathway [GO:0008593]; regulation of postsynapse organization [GO:0099175]; regulation of vasculature development [GO:1901342]; response to tumor necrosis factor [GO:0034612]	hit with GO BP
GN017351	Chromosome_3A	2721	4	29	35.68540977581772	0.3347800631300275	91.60346695557963	29	1	92.28187919463087	12	1	91.28	17	1	88.13559322033899	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017352	Chromosome_3A	1755	1	30	41.13960113960114	0.4062750787085623	88.10467882632831	30	1	88.10467882632831	30	1	NA	NA	NA	75.8257203092059	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017353	Chromosome_3A	5034	2	98	39.094159713945174	0.5098090277777778	70.48325646681371	98	0.7448979591836735	78.3529411764706	31	0.9032258064516129	67.78017241379311	67	0.6716417910447762	1.814516129032258	42	0	methylated (>=50%)	Q9H892	Tetratricopeptide repeat protein 12 (TPR repeat protein 12)	axonemal dynein complex assembly [GO:0070286]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN017354	Chromosome_3A	9192	13	159	34.508268059181894	0.5841578934746636	93.67633910428351	158	0.9936708860759493	94.86486486486487	23	1	93.51381317564446	135	0.9925925925925926	94.81957842086459	37	1	methylated (>=50%)	Q7ZVN5	Signal recognition particle subunit SRP54 (EC 3.6.5.4) (Signal recognition particle 54 kDa protein)	exocrine pancreas development [GO:0031017]; granulocyte differentiation [GO:0030851]; neutrophil chemotaxis [GO:0030593]; regulation of motor neuron axon guidance [GO:1905812]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	hit with GO BP
GN017355	Chromosome_3A	15220	18	212	35.90670170827858	0.43364177703568274	87.90983606557377	210	0.9714285714285714	89.40677966101696	38	1	87.60711225364182	172	0.9651162790697675	91.28989361702128	44	0.9772727272727273	methylated (>=50%)	Q9Y597	BTB/POZ domain-containing protein KCTD3 (Renal carcinoma antigen NY-REN-45)	protein homooligomerization [GO:0051260]	hit with GO BP
GN017356	Chromosome_3A	1083	1	16	38.59649122807018	0.40561797752808987	94.49112978524744	16	1	94.49112978524744	16	1	NA	NA	NA	96.12238715540745	39	1	methylated (>=50%)	Q3B7H2	Phosphatidate cytidylyltransferase, mitochondrial (EC 2.7.7.41) (CDP-diacylglycerol synthase) (CDP-DAG synthase) (Mitochondrial translocator assembly and maintenance protein 41 homolog) (TAM41)	cardiolipin biosynthetic process [GO:0032049]; CDP-diacylglycerol biosynthetic process [GO:0016024]	hit with GO BP
GN017357	Chromosome_3A	375	1	23	46.666666666666664	1.1429896633978267	2.4523160762942777	23	0	2.4523160762942777	23	0	NA	NA	NA	1.4107611548556431	50	0	unmethylated (<10%)	Q8BUZ1	Actin-binding Rho-activating protein (Striated muscle activator of Rho-dependent signaling) (STARS)	actin cytoskeleton organization [GO:0030036]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of Rho protein signal transduction [GO:0035025]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein import into nucleus [GO:0006606]	hit with GO BP
GN017358	Chromosome_3A	4715	3	51	36.542948038176036	0.3239999676626568	51.11984282907662	51	0.45098039215686275	23.13937753721245	10	0.2	62.56921373200443	41	0.5121951219512195	86.15618661257606	27	0.9259259259259259	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017359	Chromosome_3A	474	1	24	45.56962025316456	0.9896476729012614	0.6321112515802781	24	0	0.6321112515802781	24	0	NA	NA	NA	2.070468579731202	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017360	Chromosome_3A	13913	29	391	37.07324085387767	0.8191214563663628	0.48250497688699934	379	0	0.47898257494425633	154	0	0.48493838429940667	225	0	0.7416563658838071	33	0	unmethylated (<10%)	O08746	Matrilin-2	axon guidance [GO:0007411]; dendrite regeneration [GO:0031104]; extracellular matrix organization [GO:0030198]; glial cell migration [GO:0008347]; neuron migration [GO:0001764]; neuron projection development [GO:0031175]; response to axon injury [GO:0048678]	hit with GO BP
GN017361	Chromosome_3A	3808	2	127	35.320378151260506	1.0700652727071578	1.815135437028763	127	0	0.4589787722317843	38	0	2.251337885218675	89	0	0.35335689045936397	35	0	unmethylated (<10%)	Q6B9X6	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)	contractile vacuole discharge [GO:0070177]; contractile vacuole organization [GO:0033298]; hypotonic response [GO:0006971]; mitotic cytokinesis [GO:0000281]; myosin II filament organization [GO:0031038]; regulation of sorocarp development [GO:0031156]; sorocarp morphogenesis [GO:0031288]	hit with GO BP
GN017362	Chromosome_3A	4094	9	93	35.36883243771373	0.7279683377308707	1.4109347442680775	93	0	1.059001512859304	19	0	1.5339857180640042	74	0	0.7187350263536176	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017363	Chromosome_3A	1988	7	49	40.8953722334004	0.5943017509608932	0.6060606060606061	48	0	0.30181086519114686	27	0	1.0670731707317074	21	0	0.6190034045187248	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013002	Chromosome_3A	651	1	7	46.54377880184332	0.21150097465886938	NA	0	NA	NA	NA	NA	NA	NA	NA	81.07098381070983	20	0.95	NA	NA	NA	NA	no Swiss-Prot hit
GN002725	Chromosome_3A	1162	1	19	46.64371772805508	0.3076644370122631	95.65217391304348	2	1	95.65217391304348	2	1	NA	NA	NA	69.86301369863014	4	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017381	Chromosome_3A	1071	1	37	42.016806722689076	0.7830030231776957	0.9473684210526315	37	0	0.9473684210526315	37	0	NA	NA	NA	15.160349854227405	31	0.0967741935483871	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017380	Chromosome_3A	3080	2	33	34.35064935064935	0.3673225998807394	90.90042877560744	33	1	91.81240063593005	23	1	89.53626634958383	10	1	84.98743718592965	23	0.8695652173913043	methylated (>=50%)	Q8K2J9	BTB/POZ domain-containing protein 6	neurogenesis [GO:0022008]	hit with GO BP
GN017379	Chromosome_3A	3099	5	33	37.52823491448854	0.30274422735346357	90.48562933597621	33	0.9696969696969697	90.15544041450777	13	1	90.69020866773675	20	0.95	94.6862803962774	49	0.9795918367346939	methylated (>=50%)	E9Q349	WD repeat-containing protein 25	NA	hit, no GO BP
GN017378	Chromosome_3A	20164	8	294	36.396548303907956	0.4403928981655273	83.39733589343574	256	0.9140625	59.7	17	0.7647058823529411	84.9099961700498	239	0.9246861924686193	67.49134092033647	54	0.7037037037037037	methylated (>=50%)	P23381	Tryptophan--tRNA ligase, cytoplasmic (EC 6.1.1.2) (Interferon-induced protein 53) (IFP53) (Tryptophanyl-tRNA synthetase) (TrpRS) (hWRS) [Cleaved into: T1-TrpRS; T2-TrpRS]	intracellular signal transduction [GO:0035556]; negative regulation of cell population proliferation [GO:0008285]; regulation of angiogenesis [GO:0045765]; translation [GO:0006412]; tryptophanyl-tRNA aminoacylation [GO:0006436]	hit with GO BP
GN017377	Chromosome_3A	3744	3	49	34.98931623931624	0.4293768914082961	84.00967481859715	49	1	89.31750741839762	11	1	82.8355759763702	38	1	19.773242630385486	44	0.13636363636363635	methylated (>=50%)	Q5JTD7	Leucine-rich repeat-containing protein 73	NA	hit, no GO BP
GN017376	Chromosome_3A	11934	8	136	35.31087648734707	0.36696686810732004	86.3818119501885	136	0.8823529411764706	87.14161598609904	18	0.8888888888888888	86.26677190213101	118	0.8813559322033898	71.90563725490196	56	0.6964285714285714	methylated (>=50%)	Q9W6S8	Survival motor neuron protein 1	axon arborization [GO:0140060]; axon development [GO:0061564]; axon extension [GO:0048675]; axonogenesis [GO:0007409]; dendrite development [GO:0016358]; motor neuron axon guidance [GO:0008045]; mRNA splicing, via spliceosome [GO:0000398]; neuromast regeneration [GO:0070657]; neuromuscular junction development [GO:0007528]; neuron cellular homeostasis [GO:0070050]; peripheral nervous system neuron axonogenesis [GO:0048936]; positive regulation of oxidative phosphorylation [GO:1903862]; protein complex oligomerization [GO:0051259]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of neuromuscular junction development [GO:1904396]; spliceosomal snRNP assembly [GO:0000387]; synaptic assembly at neuromuscular junction [GO:0051124]; tissue regeneration [GO:0042246]	hit with GO BP
GN017375	Chromosome_3A	6694	4	60	34.284433821332534	0.3068062027347032	71.63974815220367	60	0.8	35.754189944134076	6	0.5	75.53869499241274	54	0.8333333333333334	0.8062418725617685	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017374	Chromosome_3A	2277	1	83	42.24857268335529	0.8170923098872878	0.4897018579864612	83	0	0.4897018579864612	83	0	NA	NA	NA	0.5816554809843401	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017373	Chromosome_3A	9648	9	91	33.96558872305141	0.3291812985213297	78.4639069449196	91	0.8571428571428571	57.93939393939394	12	0.6666666666666666	81.83628759211312	79	0.8860759493670886	52.359550561797754	28	0.5	methylated (>=50%)	Q63ZM9	Zinc finger protein 830 (Coiled-coil domain-containing protein 16)	mitotic DNA damage checkpoint signaling [GO:0044773]; mitotic DNA replication checkpoint signaling [GO:0033314]; nuclear DNA replication [GO:0033260]	hit with GO BP
GN017372	Chromosome_3A	52595	4	556	34.585036600437306	0.3552352009091978	80.04761237921859	523	0.875717017208413	74.04580152671755	9	0.7777777777777778	80.13700577016003	514	0.877431906614786	85.80060422960725	26	0.9615384615384616	methylated (>=50%)	Q9BQP7	Mitochondrial genome maintenance exonuclease 1 (EC 3.1.-.-)	mitochondrial DNA repair [GO:0043504]; mitochondrial DNA replication [GO:0006264]	hit with GO BP
GN017371	Chromosome_3A	16292	7	168	35.89491775104346	0.3398313418159063	63.19526627218935	162	0.7716049382716049	77.14285714285714	26	0.8461538461538461	60.607950116913486	136	0.7573529411764706	80.66439522998296	15	1	methylated (>=50%)	Q6TXF1	Arrestin domain-containing protein 3 (Liver regeneration-related protein LRRG00048)	fat pad development [GO:0060613]; negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071878]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of heat generation [GO:0031651]; negative regulation of locomotion involved in locomotory behavior [GO:0090327]; positive regulation of hippo signaling [GO:0035332]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; response to mechanical stimulus [GO:0009612]; skin development [GO:0043588]; temperature homeostasis [GO:0001659]	hit with GO BP
GN017370	Chromosome_3A	18717	9	195	35.30480312015815	0.33534828143670486	85.8038123422404	188	0.9574468085106383	91.66040570999249	30	1	85.03642449301043	158	0.9493670886075949	86.94649446494465	28	1	methylated (>=50%)	Q659X0	Alpha-(1,6)-fucosyltransferase (Alpha1-6FucT) (EC 2.4.1.68) (Fucosyltransferase 8) (GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase) (GDP-fucose--glycoprotein fucosyltransferase) (Glycoprotein 6-alpha-L-fucosyltransferase)	GDP-L-fucose metabolic process [GO:0046368]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN017369	Chromosome_3A	34632	16	383	34.24867174867175	0.37922450859555723	83.29232012340691	383	0.9530026109660574	89.09329829172142	30	1	82.94884263761914	353	0.9490084985835694	57.971014492753625	45	0.4444444444444444	methylated (>=50%)	Q9UGJ1	Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76)	meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; protein-containing complex assembly [GO:0065003]; spindle assembly [GO:0051225]	hit with GO BP
GN017368	Chromosome_3A	7116	9	97	35.652051714446316	0.42936533114374753	89.54865282306504	97	0.9896907216494846	93.33333333333333	4	1	89.36476516105813	93	0.989247311827957	83.7173579109063	10	1	methylated (>=50%)	Q9ER88	Small ribosomal subunit protein mS29 (EC 3.6.5.-) (28S ribosomal protein S29, mitochondrial) (MRP-S29) (S29mt) (Death-associated protein 3) (DAP-3)	apoptotic mitochondrial changes [GO:0008637]; mitochondrial translation [GO:0032543]	hit with GO BP
GN017367	Chromosome_3A	30211	23	298	34.676111350170466	0.33070608892415293	81.40961857379767	295	0.8338983050847457	91.99951438630569	132	0.9621212121212122	72.55658175175074	163	0.7300613496932515	37.12608331003634	53	0.37735849056603776	methylated (>=50%)	Q9NR48	Histone-lysine N-methyltransferase ASH1L (EC 2.1.1.359) (EC 2.1.1.367) (ASH1-like protein) (huASH1) (Absent small and homeotic disks protein 1 homolog) (Lysine N-methyltransferase 2H)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN017366	Chromosome_3A	8248	7	89	35.499515033947624	0.34530395056710844	59.21356977640709	89	0.5955056179775281	64.23637759017652	35	0.7142857142857143	56.68469860896445	54	0.5185185185185185	42.13973799126637	30	0.6333333333333333	methylated (>=50%)	Q9QXD6	Fructose-1,6-bisphosphatase 1 (FBPase 1) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase 1) (Fructose-1,6-bisphosphatase isozyme 3) (FBPase 3) (Liver FBPase)	cellular hyperosmotic salinity response [GO:0071475]; cellular hypotonic salinity response [GO:0071477]; cellular response to cAMP [GO:0071320]; cellular response to insulin stimulus [GO:0032869]; cellular response to magnesium ion [GO:0071286]; cellular response to phorbol 13-acetate 12-myristate [GO:1904628]; cellular response to raffinose [GO:0097403]; cellular response to xenobiotic stimulus [GO:0071466]; fructose 6-phosphate metabolic process [GO:0006002]; gluconeogenesis [GO:0006094]; negative regulation of cell growth [GO:0030308]; negative regulation of glycolytic process [GO:0045820]; negative regulation of Ras protein signal transduction [GO:0046580]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of gluconeogenesis [GO:0006111]; response to nutrient levels [GO:0031667]	hit with GO BP
GN017365	Chromosome_3A	10875	15	99	35.37471264367816	0.2913088299754858	78.6297809134794	98	0.8877551020408163	87.75995246583481	35	0.9714285714285714	74.48015122873346	63	0.8412698412698413	33.7942955920484	61	0.2459016393442623	methylated (>=50%)	Q5R4N7	Translesion synthesis protein REV1 (Molecular adapter protein REV1) (Rev1-like terminal deoxycytidyl transferase) (Reversionless protein 1 homolog) (REV1 homolog) (Template-dependent deoxycytidyl transferase REV1) (EC 2.7.7.-)	DNA repair [GO:0006281]; error-free translesion synthesis [GO:0070987]; error-prone translesion synthesis [GO:0042276]; somatic hypermutation of immunoglobulin genes [GO:0016446]; translesion synthesis [GO:0019985]	hit with GO BP
GN017364	Chromosome_3A	498	1	9	42.16867469879518	0.42029257314328583	85.86626139817629	9	1	85.86626139817629	9	1	NA	NA	NA	7.971912432878976	78	0.0641025641025641	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017410	Chromosome_3A	1401	1	55	43.46895074946467	0.834127173136461	0.9158557527189468	55	0	0.9158557527189468	55	0	NA	NA	NA	0.5757307351638619	62	0	unmethylated (<10%)	Q63245	Forkhead box protein D3 (HNF3/FH transcription factor genesis) (Hepatocyte nuclear factor 3 forkhead homolog 2) (HFH-2)	anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; cellular response to leukemia inhibitory factor [GO:1990830]; embryonic placenta development [GO:0001892]; in utero embryonic development [GO:0001701]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; trophectodermal cell differentiation [GO:0001829]	hit with GO BP
GN013416	Chromosome_3A	762	1	11	39.501312335958005	0.37705802968960866	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017407	Chromosome_3A	26471	15	251	35.16678629443542	0.3083002391799449	81.86986734049273	251	0.9282868525896414	86.28571428571429	38	0.9473684210526315	81.18000324622626	213	0.9248826291079812	12.33974358974359	13	0	methylated (>=50%)	Q6NU08	Myotubularin-related protein 10-B (Inactive phosphatidylinositol 3-phosphatase 10-B)	phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN001702	Chromosome_3A	342	1	9	52.63157894736842	0.383026381284221	94.40993788819875	8	1	94.40993788819875	8	1	NA	NA	NA	69.63812886142983	18	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017406	Chromosome_3A	55508	69	627	35.82006197304893	0.35335212002037053	75.74466876792458	627	0.8899521531100478	75.94531083101901	206	0.8737864077669902	75.67201701798491	421	0.8978622327790974	53.088235294117645	17	0.4117647058823529	methylated (>=50%)	Q9C0G6	Dynein axonemal heavy chain 6 (Axonemal beta dynein heavy chain 6) (Ciliary dynein heavy chain 6)	cilium movement involved in cell motility [GO:0060294]	hit with GO BP
GN017405	Chromosome_3A	8067	12	66	34.28783934548159	0.2802339045854562	62.51504211793021	66	0.7121212121212122	73.96923076923076	31	0.8387096774193549	56.977090151740555	35	0.6	40.9068746952706	33	0.45454545454545453	methylated (>=50%)	Q0VDD8	Dynein axonemal heavy chain 14 (Axonemal beta dynein heavy chain 14) (Ciliary dynein heavy chain 14)	cilium movement involved in cell motility [GO:0060294]	hit with GO BP
GN017404	Chromosome_3A	35768	23	361	35.26056810556923	0.32640802276905023	79.554543153632	315	0.8888888888888888	87.18070009460737	45	0.9555555555555556	78.64066662887592	270	0.8777777777777778	63.178896031921965	53	0.6981132075471698	methylated (>=50%)	Q4V8C3	Echinoderm microtubule-associated protein-like 1 (EMAP-1)	brain development [GO:0007420]; hematopoietic progenitor cell differentiation [GO:0002244]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle organization [GO:0007052]; neuroblast proliferation [GO:0007405]	hit with GO BP
GN017403	Chromosome_3A	306	1	0	44.77124183006536	0	NA	0	NA	NA	NA	NA	NA	NA	NA	80.16949152542372	14	0.9285714285714286	NA	NA	NA	NA	no Swiss-Prot hit
GN017402	Chromosome_3A	3301	2	28	37.53408058164192	0.2412130069419072	63.72812920592194	28	0.7857142857142857	65.73373676248109	26	0.8076923076923077	47.5609756097561	2	0.5	60.76923076923077	10	0.8	methylated (>=50%)	Q16706	Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)	mannose metabolic process [GO:0006013]; N-glycan processing [GO:0006491]; viral protein processing [GO:0019082]	hit with GO BP
GN017401	Chromosome_3A	2289	1	83	42.11446046308431	0.8186695278969958	0.5647058823529412	83	0	0.5647058823529412	83	0	NA	NA	NA	0.4668806536329151	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017395	Chromosome_3A	1228	3	22	35.91205211726384	0.5577439200627606	96.26604434072345	16	1	96.26604434072345	16	1	NA	NA	NA	95.50342130987292	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017394	Chromosome_3A	1962	3	21	35.321100917431195	0.3458516603431488	88.646288209607	21	1	95.92592592592592	8	1	86.4	13	1	96.4573268921095	34	1	methylated (>=50%)	G1U0Q2	Small ribosomal subunit protein uS19 (40S ribosomal protein S15)	positive regulation of signal transduction by p53 class mediator [GO:1901798]; ribosomal small subunit assembly [GO:0000028]; ribosomal small subunit export from nucleus [GO:0000056]; rRNA processing [GO:0006364]; translation [GO:0006412]	hit with GO BP
GN017393	Chromosome_3A	8358	6	119	33.22565206987318	0.5159259259259259	80.24239891338418	117	0.8632478632478633	84.28731762065095	17	0.8823529411764706	79.82718894009217	100	0.86	64.54515161612795	42	0.6428571428571429	methylated (>=50%)	P42026	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (EC 7.1.1.2) (Complex I-20kD) (CI-20kD) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (PSST subunit)	aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN017392	Chromosome_3A	8856	9	92	36.099819331526646	0.31886260939533856	64.1869918699187	90	0.7333333333333333	71.6589861751152	33	0.8484848484848485	61.49806522940851	57	0.6666666666666666	22.35576923076923	7	0	methylated (>=50%)	A4UTP7	Myocyte-specific enhancer factor 2C	B cell homeostasis [GO:0001782]; B cell proliferation [GO:0042100]; B cell receptor signaling pathway [GO:0050853]; blood vessel development [GO:0001568]; blood vessel remodeling [GO:0001974]; cardiac ventricle formation [GO:0003211]; cardiocyte differentiation [GO:0035051]; cellular response to calcium ion [GO:0071277]; cellular response to fluid shear stress [GO:0071498]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to parathyroid hormone stimulus [GO:0071374]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to trichostatin A [GO:0035984]; cellular response to xenobiotic stimulus [GO:0071466]; chondrocyte differentiation [GO:0002062]; endochondral ossification [GO:0001958]; epithelial cell proliferation involved in renal tubule morphogenesis [GO:2001013]; germinal center formation [GO:0002467]; glomerulus morphogenesis [GO:0072102]; heart development [GO:0007507]; heart looping [GO:0001947]; humoral immune response [GO:0006959]; learning or memory [GO:0007611]; MAPK cascade [GO:0000165]; melanocyte differentiation [GO:0030318]; muscle cell fate determination [GO:0007521]; negative regulation of gene expression [GO:0010629]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of ossification [GO:0030279]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nephron tubule epithelial cell differentiation [GO:0072160]; neural crest cell differentiation [GO:0014033]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; osteoblast differentiation [GO:0001649]; outflow tract morphogenesis [GO:0003151]; platelet formation [GO:0030220]; positive regulation of B cell proliferation [GO:0030890]; positive regulation of behavioral fear response [GO:2000987]; positive regulation of bone mineralization [GO:0030501]; positive regulation of cardiac muscle cell differentiation [GO:2000727]; positive regulation of cardiac muscle cell proliferation [GO:0060045]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of macrophage apoptotic process [GO:2000111]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of skeletal muscle cell differentiation [GO:2001016]; positive regulation of skeletal muscle tissue development [GO:0048643]; positive regulation of transcription by RNA polymerase II [GO:0045944]; primary heart field specification [GO:0003138]; regulation of germinal center formation [GO:0002634]; regulation of megakaryocyte differentiation [GO:0045652]; regulation of synaptic activity [GO:0060025]; renal tubule morphogenesis [GO:0061333]; secondary heart field specification [GO:0003139]; sinoatrial valve morphogenesis [GO:0003185]; skeletal muscle tissue development [GO:0007519]; smooth muscle cell differentiation [GO:0051145]; ventricular cardiac muscle cell differentiation [GO:0055012]	hit with GO BP
GN017391	Chromosome_3A	31516	20	353	35.59461860642214	0.35424026805872166	82.35856850893595	349	0.9312320916905444	86.875	74	0.9594594594594594	81.58578194225187	275	0.9236363636363636	81.61189358372457	15	1	methylated (>=50%)	Q9NZ56	Formin-2	actin cytoskeleton organization [GO:0030036]; cell migration [GO:0016477]; cellular response to hypoxia [GO:0071456]; DNA damage response [GO:0006974]; establishment of meiotic spindle localization [GO:0051295]; formin-nucleated actin cable assembly [GO:0070649]; homologous chromosome movement towards spindle pole in meiosis I anaphase [GO:0051758]; intracellular signal transduction [GO:0035556]; intracellular transport [GO:0046907]; negative regulation of apoptotic process [GO:0043066]; negative regulation of protein catabolic process [GO:0042177]; oogenesis [GO:0048477]; polar body extrusion after meiotic divisions [GO:0040038]; positive regulation of double-strand break repair [GO:2000781]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN017390	Chromosome_3A	3873	3	40	36.48334624322231	0.3104696324145367	86.47522000926355	40	0.975	94.03726708074534	19	1	81.97932053175775	21	0.9523809523809523	100	1	1	methylated (>=50%)	Q7L5Y6	DET1 homolog (De-etiolated-1 homolog)	positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein ubiquitination [GO:0016567]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN017389	Chromosome_3A	5797	7	51	36.708642401242024	0.2619017457635977	91.18923611111111	46	1	95.81151832460733	8	1	90.27055150884496	38	1	97.48533109807208	30	1	methylated (>=50%)	A4UTP7	Myocyte-specific enhancer factor 2C	B cell homeostasis [GO:0001782]; B cell proliferation [GO:0042100]; B cell receptor signaling pathway [GO:0050853]; blood vessel development [GO:0001568]; blood vessel remodeling [GO:0001974]; cardiac ventricle formation [GO:0003211]; cardiocyte differentiation [GO:0035051]; cellular response to calcium ion [GO:0071277]; cellular response to fluid shear stress [GO:0071498]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to parathyroid hormone stimulus [GO:0071374]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to trichostatin A [GO:0035984]; cellular response to xenobiotic stimulus [GO:0071466]; chondrocyte differentiation [GO:0002062]; endochondral ossification [GO:0001958]; epithelial cell proliferation involved in renal tubule morphogenesis [GO:2001013]; germinal center formation [GO:0002467]; glomerulus morphogenesis [GO:0072102]; heart development [GO:0007507]; heart looping [GO:0001947]; humoral immune response [GO:0006959]; learning or memory [GO:0007611]; MAPK cascade [GO:0000165]; melanocyte differentiation [GO:0030318]; muscle cell fate determination [GO:0007521]; negative regulation of gene expression [GO:0010629]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of ossification [GO:0030279]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nephron tubule epithelial cell differentiation [GO:0072160]; neural crest cell differentiation [GO:0014033]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; osteoblast differentiation [GO:0001649]; outflow tract morphogenesis [GO:0003151]; platelet formation [GO:0030220]; positive regulation of B cell proliferation [GO:0030890]; positive regulation of behavioral fear response [GO:2000987]; positive regulation of bone mineralization [GO:0030501]; positive regulation of cardiac muscle cell differentiation [GO:2000727]; positive regulation of cardiac muscle cell proliferation [GO:0060045]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of macrophage apoptotic process [GO:2000111]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of skeletal muscle cell differentiation [GO:2001016]; positive regulation of skeletal muscle tissue development [GO:0048643]; positive regulation of transcription by RNA polymerase II [GO:0045944]; primary heart field specification [GO:0003138]; regulation of germinal center formation [GO:0002634]; regulation of megakaryocyte differentiation [GO:0045652]; regulation of synaptic activity [GO:0060025]; renal tubule morphogenesis [GO:0061333]; secondary heart field specification [GO:0003139]; sinoatrial valve morphogenesis [GO:0003185]; skeletal muscle tissue development [GO:0007519]; smooth muscle cell differentiation [GO:0051145]; ventricular cardiac muscle cell differentiation [GO:0055012]	hit with GO BP
GN017388	Chromosome_3A	7692	7	139	34.59438377535101	0.6051523425295787	78.91954846801649	139	0.8920863309352518	92.4646781789639	13	1	78.09976247030879	126	0.8809523809523809	1.4760147601476015	40	0	methylated (>=50%)	Q9QY33	Tetraspanin-3 (Tspan-3) (OSP-associated protein 1) (OAP-1) (Tetraspanin TM4-A) (Transmembrane 4 superfamily member 8)	NA	hit, no GO BP
GN017387	Chromosome_3A	4266	1	33	38.021565869667135	0.21405079939484709	79.0516206482593	33	0.9696969696969697	79.0516206482593	33	0.9696969696969697	NA	NA	NA	51.31964809384164	19	0.5789473684210527	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017386	Chromosome_3A	3493	2	45	41.626109361580305	0.2980149400879721	87.58476786645801	45	1	88.04232804232804	44	1	55.55555555555556	1	1	44.19642857142857	20	0.3	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017385	Chromosome_3A	12386	6	197	36.19409010172776	0.4877580825520343	80.58037689109086	197	0.934010152284264	58.55397148676171	18	0.7222222222222222	82.6760972773956	179	0.9553072625698324	27.18978102189781	17	0.23529411764705882	methylated (>=50%)	Q9UBB5	Methyl-CpG-binding domain protein 2 (Demethylase) (DMTase) (Methyl-CpG-binding protein MBD2)	cellular response to serotonin [GO:1904015]; chromatin remodeling [GO:0006338]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; embryonic organ development [GO:0048568]; maternal behavior [GO:0042711]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; response to bisphenol A [GO:1903925]; response to estradiol [GO:0032355]; response to mechanical stimulus [GO:0009612]; response to nutrient levels [GO:0031667]; ventricular cardiac muscle tissue development [GO:0003229]	hit with GO BP
GN017383	Chromosome_3A	21479	8	192	33.62353927091578	0.31671435338469206	84.0351470091247	191	0.9790575916230366	76.79180887372014	5	0.8	84.18149220797132	186	0.9838709677419355	39.681697612732094	28	0.4642857142857143	methylated (>=50%)	Q2TBK4	HAUS augmin-like complex subunit 1 (Coiled-coil domain-containing protein 5)	centrosome cycle [GO:0007098]; spindle assembly [GO:0051225]	hit with GO BP
GN017382	Chromosome_3A	2327	4	31	37.344220025784274	0.38224758634576456	73.84965831435079	31	0.9032258064516129	71.09375	3	1	74.02031930333817	28	0.8928571428571429	85.01683501683502	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017411	Chromosome_3A	150	1	8	46	1.0101010101010102	11.031518624641834	8	0	11.031518624641834	8	0	NA	NA	NA	6.108486724222186	72	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017412	Chromosome_3A	8107	4	176	35.27815468113975	0.698605562083823	81.36116910229646	176	0.8636363636363636	79.53281423804226	23	0.8260869565217391	81.50957024196461	153	0.869281045751634	0	1	0	methylated (>=50%)	Q9JHB5	Translin-associated protein X (Translin-associated factor X)	siRNA processing [GO:0030422]	hit with GO BP
GN017413	Chromosome_3A	14919	18	97	35.364300556337554	0.20914154506367058	79.47058823529412	87	0.896551724137931	90.08567931456548	25	0.96	74.466243508367	62	0.8709677419354839	90.32103497843795	31	1	methylated (>=50%)	B1AVY7	Kinesin-like protein KIF16B	cellular response to type II interferon [GO:0071346]; early endosome to late endosome transport [GO:0045022]; endoderm development [GO:0007492]; epidermal growth factor receptor signaling pathway [GO:0007173]; fibroblast growth factor receptor signaling pathway [GO:0008543]; formation of primary germ layer [GO:0001704]; Golgi to endosome transport [GO:0006895]; receptor catabolic process [GO:0032801]; regulation of receptor recycling [GO:0001919]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN017414	Chromosome_3A	6768	12	58	32.55023640661938	0.32486435847101625	88.96037056098817	58	1	90.73170731707317	14	1	88.48662752772341	44	1	87.27272727272727	25	1	methylated (>=50%)	B1AVY7	Kinesin-like protein KIF16B	cellular response to type II interferon [GO:0071346]; early endosome to late endosome transport [GO:0045022]; endoderm development [GO:0007492]; epidermal growth factor receptor signaling pathway [GO:0007173]; fibroblast growth factor receptor signaling pathway [GO:0008543]; formation of primary germ layer [GO:0001704]; Golgi to endosome transport [GO:0006895]; receptor catabolic process [GO:0032801]; regulation of receptor recycling [GO:0001919]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN002880	Chromosome_3A	281	1	11	43.06049822064057	0.8491758241758242	0.42016806722689076	11	0	0.42016806722689076	11	0	NA	NA	NA	0.5655042412818096	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002169	Chromosome_3A	401	1	3	37.406483790523694	0.21773755656108598	0	3	0	0	3	0	NA	NA	NA	0.7950530035335689	68	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017415	Chromosome_3A	2163	4	27	39.75959315765141	0.3170108129233976	87.88177339901478	27	0.9629629629629629	86.90205011389521	23	0.9565217391304348	94.16058394160584	4	1	1.0684798445847499	44	0	methylated (>=50%)	Q5RGT6	RNA 2',3'-cyclic phosphatase angel2 (EC 3.-.-.-)	nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]	hit with GO BP
GN017416	Chromosome_3A	8357	10	78	33.57664233576642	0.33258382250522334	83.51648351648352	78	0.8717948717948718	57.38678544914625	23	0.5652173913043478	93.38379590692459	55	1	20.707395498392284	23	0.21739130434782608	methylated (>=50%)	Q86V25	Tubulinyl-Tyr carboxypeptidase 2 (EC 3.4.17.17) (Vasohibin-2) (Vasohibin-like protein)	axon development [GO:0061564]; cell-cell fusion [GO:0140253]; positive regulation of angiogenesis [GO:0045766]; positive regulation of endothelial cell proliferation [GO:0001938]; proteolysis [GO:0006508]; regulation of angiogenesis [GO:0045765]	hit with GO BP
GN017417	Chromosome_3A	13644	17	111	34.83582527118147	0.26981865215741396	85.88007736943908	111	0.963963963963964	85.20710059171597	40	0.975	86.17337829795676	71	0.9577464788732394	86.99551569506727	8	1	methylated (>=50%)	Q8R4P9	ATP-binding cassette sub-family C member 10 (EC 7.6.2.2) (EC 7.6.2.3) (Multidrug resistance-associated protein 7)	leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]	hit with GO BP
GN017418	Chromosome_3A	327	1	15	42.50764525993884	1.14656381486676	91.88311688311688	15	1	91.88311688311688	15	1	NA	NA	NA	83.01886792452831	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017419	Chromosome_3A	30772	16	398	35.23007929286364	0.41879826320840297	80.8619768477293	375	0.8826666666666667	78.36879432624113	37	0.8648648648648649	81.0218701436531	338	0.8846153846153846	0.9738283627510651	51	0	methylated (>=50%)	Q5F3L1	Ribosomal protein S6 kinase alpha-5 (S6K-alpha-5) (EC 2.7.11.1)	interleukin-1-mediated signaling pathway [GO:0070498]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-translational protein modification [GO:0043687]; regulation of DNA-templated transcription [GO:0006355]; regulation of postsynapse organization [GO:0099175]; TORC1 signaling [GO:0038202]	hit with GO BP
GN017420	Chromosome_3A	910	2	3	37.8021978021978	0.09259259259259259	58.2010582010582	3	0.3333333333333333	58.2010582010582	3	0.3333333333333333	NA	NA	NA	45.3551912568306	24	0.2916666666666667	NA	A1A4Q2	Prolyl-tRNA synthetase associated domain-containing protein 1 (PrdX deacylase domain-containing protein 1)	aminoacyl-tRNA metabolism involved in translational fidelity [GO:0106074]	hit with GO BP
GN017421	Chromosome_3A	8538	11	98	35.06676036542516	0.3745206166186239	86.49764150943396	96	0.9270833333333334	87.77070063694268	26	0.9230769230769231	86.11430763329497	70	0.9285714285714286	46.97156983930779	40	0.425	methylated (>=50%)	Q8N7H5	RNA polymerase II-associated factor 1 homolog (hPAF1) (Pancreatic differentiation protein 2)	cellular response to lipopolysaccharide [GO:0071222]; endodermal cell fate commitment [GO:0001711]; mRNA 3'-end processing [GO:0031124]; negative regulation of myeloid cell differentiation [GO:0045638]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell cycle G1/S phase transition [GO:1902808]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to nucleus [GO:0034504]; stem cell population maintenance [GO:0019827]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN017422	Chromosome_3A	5138	8	93	36.4733359283768	0.546720823798627	66.68024439918534	92	0.5978260869565217	59.5372460496614	48	0.4375	70.7138304652645	44	0.7727272727272727	0.9110021023125437	27	0	methylated (>=50%)	Q07837	Amino acid transporter heavy chain SLC3A1 (D2h) (Neutral and basic amino acid transport protein) (NBAT) (Solute carrier family 3 member 1) (b(0,+)-type amino acid transporter-related heavy chain) (rBAT)	amino acid transport [GO:0006865]; aspartate transmembrane transport [GO:0015810]; basic amino acid transport [GO:0015802]; carbohydrate metabolic process [GO:0005975]; gene expression [GO:0010467]; L-cystine transport [GO:0015811]; L-glutamate transmembrane transport [GO:0015813]	hit with GO BP
GN017423	Chromosome_3A	906	1	42	47.35099337748344	0.8294171498321635	0.995850622406639	42	0	0.995850622406639	42	0	NA	NA	NA	0.9475679090334808	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017430	Chromosome_3A	25008	4	431	34.808861164427384	0.5690452063286516	83.00100057175528	422	0.933649289099526	55.609756097560975	17	0.35294117647058826	84.26029752560365	405	0.9580246913580247	41.98511166253102	26	0.07692307692307693	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017429	Chromosome_3A	8902	7	61	36.3401482812851	0.20814819244226518	75.6163458291118	59	0.9152542372881356	86.30460448642266	22	0.9090909090909091	71.33396404919584	37	0.918918918918919	54.573170731707314	5	0.4	methylated (>=50%)	O00409	Forkhead box protein N3 (Checkpoint suppressor 1)	mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN017428	Chromosome_3A	6253	10	85	36.06268990884376	0.4236834847100725	88.2824427480916	84	0.9761904761904762	88.86743886743886	35	1	88.0358111774281	49	0.9591836734693877	41.431044431621466	55	0.38181818181818183	methylated (>=50%)	Q6GNT7	Golgin subfamily A member 5 (Golgin-84)	Golgi organization [GO:0007030]; Golgi vesicle transport [GO:0048193]; retrograde transport, vesicle recycling within Golgi [GO:0000301]	hit with GO BP
GN017427	Chromosome_3A	5207	9	40	34.146341463414636	0.26719520721483503	71.46254458977408	40	0.65	64.6129541864139	11	0.6363636363636364	73.75661375661376	29	0.6551724137931034	0.6091370558375635	49	0	methylated (>=50%)	P54921	Alpha-soluble NSF attachment protein (SNAP-alpha) (N-ethylmaleimide-sensitive factor attachment protein alpha)	apical protein localization [GO:0045176]; brain development [GO:0007420]; intracellular protein transport [GO:0006886]; membrane fusion [GO:0061025]; neuron differentiation [GO:0030182]; positive regulation of ATP-dependent activity [GO:0032781]; protein-containing complex disassembly [GO:0032984]; regulation of synaptic vesicle priming [GO:0010807]; response to hyperoxia [GO:0055093]; SNARE complex disassembly [GO:0035494]; synaptic transmission, glutamatergic [GO:0035249]; synaptic vesicle priming [GO:0016082]	hit with GO BP
GN017426	Chromosome_3A	1053	1	47	42.35517568850902	0.9957146306132303	0.7439553626782393	47	0	0.7439553626782393	47	0	NA	NA	NA	0.5001667222407469	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017431	Chromosome_3A	41315	22	435	33.69720440517972	0.37195392264726845	58.89279497593775	434	0.663594470046083	70.31304959549772	56	0.8035714285714286	57.66555790746901	378	0.6428571428571429	83.97727272727273	11	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017432	Chromosome_3A	14481	7	193	35.68814308404116	0.4273343021175642	72.10860366713682	167	0.7904191616766467	59.25925925925926	9	0.7777777777777778	72.79593858345716	158	0.7911392405063291	69.35528886408038	40	0.675	methylated (>=50%)	B2RZ50	Cyclin-dependent kinase inhibitor 3 (EC 3.1.3.16) (EC 3.1.3.48) (CDK2-associated dual-specificity phosphatase) (Kinase-associated phosphatase)	regulation of cell cycle [GO:0051726]	hit with GO BP
GN017433	Chromosome_3A	246	1	5	52.4390243902439	0.2965284474445516	NA	0	NA	NA	NA	NA	NA	NA	NA	86.18925831202046	25	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017434	Chromosome_3A	342	1	10	55.55555555555556	0.37962037962037964	94.27083333333333	10	1	94.27083333333333	10	1	NA	NA	NA	91.32947976878613	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017435	Chromosome_3A	27306	23	336	34.677360287116386	0.41137267614613865	81.02349661489447	270	0.8629629629629629	88.9936150805716	54	0.9259259259259259	78.79765644901079	216	0.8472222222222222	0.4878048780487805	41	0	methylated (>=50%)	L7UZ85	Alpha-actinin (F-actin cross-linking protein) (allergen Der f 24)	actin filament bundle assembly [GO:0051017]	hit with GO BP
GN017436	Chromosome_3A	453	1	24	52.75938189845475	0.8039041703637977	11.471321695760599	22	0	11.471321695760599	22	0	NA	NA	NA	8.344312692138779	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017437	Chromosome_3A	19309	5	346	37.40742658863742	0.513937809724404	88.29657140269033	336	0.9107142857142857	71.98443579766537	66	0.6818181818181818	90.20540321764646	270	0.9666666666666667	7.755632582322357	41	0	methylated (>=50%)	A8K0R7	Zinc finger protein 839 (Renal carcinoma antigen NY-REN-50)	NA	hit, no GO BP
GN017438	Chromosome_3A	3549	8	94	37.33446041138349	0.7852065602169165	5.666251556662516	94	0	2.5161509690581436	44	0	8.326155612977319	50	0	25.901639344262296	27	0.037037037037037035	unmethylated (<10%)	P22031	D-galactoside-specific lectin (Sea urchin egg lectin) (SUEL)	NA	hit, no GO BP
GN017439	Chromosome_3A	11193	6	305	34.90574466184222	0.8978846012224759	0.5033838581576151	303	0	0.15205271160669032	47	0	0.5469634100339494	256	0	0.44167316186022343	50	0	unmethylated (<10%)	P22031	D-galactoside-specific lectin (Sea urchin egg lectin) (SUEL)	NA	hit, no GO BP
GN017440	Chromosome_3A	585	1	4	37.94871794871795	0.18991964937910885	3.7914691943127963	4	0	3.7914691943127963	4	0	NA	NA	NA	0.4838978808610045	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017441	Chromosome_3A	480	1	10	45.625	0.4047900151796256	2.34375	8	0	2.34375	8	0	NA	NA	NA	0.40816326530612246	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017442	Chromosome_3A	894	1	18	42.281879194630875	0.45080681308830123	0.32362459546925565	13	0	0.32362459546925565	13	0	NA	NA	NA	0.390625	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017443	Chromosome_3A	987	1	22	43.262411347517734	0.47889374090247455	0.4	22	0	0.4	22	0	NA	NA	NA	0.5865102639296188	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017444	Chromosome_3A	1909	3	34	42.744892613934	0.3899944720840243	0.5997001499250375	32	0	0.6535947712418301	29	0	0	3	0	0.8176324209029506	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017447	Chromosome_3A	47469	31	581	34.19916155806948	0.4187754417817327	63.52577972452372	575	0.7234782608695652	78.33209233060313	51	0.8823529411764706	62.39634215608315	524	0.7080152671755725	1.2934879571810882	38	0	methylated (>=50%)	Q5R4M2	Inactive serine/threonine-protein kinase ULK4 (Pseudokinase ULK4) (Unc-51-like kinase 4)	microtubule cytoskeleton organization [GO:0000226]; positive regulation of smoothened signaling pathway [GO:0045880]	hit with GO BP
GN001470	Chromosome_3A	217	1	6	41.013824884792626	0.7138157894736842	62.6865671641791	2	1	62.6865671641791	2	1	NA	NA	NA	85.05	29	0.9655172413793104	NA	NA	NA	NA	no Swiss-Prot hit
GN017463	Chromosome_3A	3457	2	56	38.79085912641018	0.4306350795239684	89.61864406779661	56	0.9464285714285714	92.55952380952381	30	0.9666666666666667	87.99342105263158	26	0.9230769230769231	79.28994082840237	30	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017462	Chromosome_3A	22733	7	386	35.91255003739058	0.5266219952026948	83.48755813395982	359	0.8272980501392758	70.30744336569579	25	0.72	84.31782274094083	334	0.8353293413173652	1.9176136363636365	39	0	methylated (>=50%)	O54692	Centromere/kinetochore protein zw10 homolog	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; establishment of mitotic spindle orientation [GO:0000132]; Golgi organization [GO:0007030]; mitotic metaphase chromosome alignment [GO:0007080]; mitotic sister chromatid segregation [GO:0000070]; mitotic spindle assembly checkpoint signaling [GO:0007094]; protein localization to kinetochore [GO:0034501]; protein-containing complex assembly [GO:0065003]; regulation of exit from mitosis [GO:0007096]	hit with GO BP
GN017461	Chromosome_3A	1723	2	57	40.220545560069645	0.8182068115169289	0.5029337803855826	57	0	0.45977011494252873	44	0	0.6191950464396285	13	0	0.3765296517100722	62	0	unmethylated (<10%)	Q90481	Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog B-A)	cell differentiation [GO:0030154]; endocrine pancreas development [GO:0031018]; floor plate development [GO:0033504]; floor plate formation [GO:0021508]; glial cell migration [GO:0008347]; motor neuron axon guidance [GO:0008045]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]; Schwann cell development [GO:0014044]; spinal cord oligodendrocyte cell differentiation [GO:0021529]; spinal cord oligodendrocyte cell fate specification [GO:0021530]; ventral spinal cord interneuron differentiation [GO:0021514]	hit with GO BP
GN017455	Chromosome_3A	788	2	12	38.83248730964467	0.4132867132867133	76.42140468227424	12	0.8333333333333334	79.62616822429906	11	0.9090909090909091	49.20634920634921	1	0	58.41423948220065	15	0.7333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017454	Chromosome_3A	669	1	23	41.25560538116592	0.8080134432599906	0.7305194805194806	23	0	0.7305194805194806	23	0	NA	NA	NA	0.64661231374754	81	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN017453	Chromosome_3A	21022	18	253	34.440110360574636	0.40669580372523684	75.75230042278041	215	0.9116279069767442	85.38461538461539	42	0.9523809523809523	73.78313613898457	173	0.9017341040462428	43.57394366197183	21	0.5238095238095238	methylated (>=50%)	Q7TSL3	F-box only protein 11	negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel [GO:1904878]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; positive regulation of protein catabolic process [GO:0045732]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of apoptotic process [GO:0042981]; sensory perception of sound [GO:0007605]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN017452	Chromosome_3A	9791	6	162	36.44163006843019	0.4988107918399848	80.70286195286195	162	0.9074074074074074	66.76706827309236	13	0.7692307692307693	82.3342736248237	149	0.9194630872483222	27.8783490224475	28	0.32142857142857145	methylated (>=50%)	Q568G4	EF-hand calcium-binding domain-containing protein 11	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN017451	Chromosome_3A	8887	8	133	33.53212557668505	0.5338962418112445	37.91226835561811	132	0.3939393939393939	80.24539877300613	12	0.8333333333333334	36.229268292682924	120	0.35	63.664341403364794	55	0.7090909090909091	sparse (10-50%)	Q96MX6	Dynein axonemal assembly factor 10 (WD repeat-containing protein 92) (WD repeat-containing protein Monad)	axonemal dynein complex assembly [GO:0070286]; protein stabilization [GO:0050821]	hit with GO BP
GN017450	Chromosome_3A	604	3	7	33.77483443708609	0.41944444444444445	60.49618320610687	7	0.8571428571428571	69.71830985915493	4	1	49.583333333333336	3	0.6666666666666666	62.35509456985967	15	0.9333333333333333	methylated (>=50%)	Q9P6P2	rRNA biogenesis protein rrp36 (Ribosomal RNA-processing protein 36)	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]	hit with GO BP
GN017449	Chromosome_3A	1125	1	38	42.84444444444444	0.7370689655172413	0.7165605095541401	38	0	0.7165605095541401	38	0	NA	NA	NA	0.4203039120594892	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017448	Chromosome_3A	40296	32	588	35.6685527099464	0.45929003217039666	74.98120457772951	565	0.8495575221238938	77.51445086705202	35	0.8857142857142857	74.85299710382354	530	0.8471698113207548	81.44329896907216	18	0.9444444444444444	methylated (>=50%)	P47990	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]	urate biosynthetic process [GO:0034418]; xanthine catabolic process [GO:0009115]	hit with GO BP
GN017471	Chromosome_3A	1566	3	27	33.9080459770115	0.6141176470588235	0.6359300476947536	27	0	0.5309734513274337	10	0	0.680786686838124	17	0	0.7987220447284346	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017472	Chromosome_3A	879	1	7	43.34470989761092	0.1992035742035742	0.7874015748031497	7	0	0.7874015748031497	7	0	NA	NA	NA	0.9460737937559129	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017473	Chromosome_3A	9544	11	77	33.518440905280805	0.2904300759106272	69.24774691925694	77	0.7922077922077922	68.23063877897117	24	0.75	69.73827699018538	53	0.8113207547169812	50.76258992805755	74	0.5675675675675675	methylated (>=50%)	Q8ND07	Basal body-orientation factor 1 (Coiled-coil domain-containing protein 176)	flagellated sperm motility [GO:0030317]; motile cilium assembly [GO:0044458]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN017474	Chromosome_3A	666	1	1	52.1021021021021	0.022469635627530363	48	1	0	48	1	0	NA	NA	NA	71.88126754913759	32	0.84375	NA	NA	NA	NA	no Swiss-Prot hit
GN017475	Chromosome_3A	1401	1	34	45.396145610278374	0.4802395451062629	9.137709137709138	30	0	9.137709137709138	30	0	NA	NA	NA	9.97830802603037	22	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN017476	Chromosome_3A	1134	1	33	42.06349206349206	0.6610492845786964	8.156028368794326	30	0	8.156028368794326	30	0	NA	NA	NA	1.990251827782291	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017477	Chromosome_3A	493	1	11	41.58215010141988	0.5167714884696016	14.814814814814815	4	0	14.814814814814815	4	0	NA	NA	NA	1.7972681524083394	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017478	Chromosome_3A	2382	2	55	35.81024349286314	0.7210554124562446	95.16655780535598	55	1	95.42222222222222	44	1	94.45812807881774	11	1	21.73913043478261	14	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017479	Chromosome_3A	2692	5	19	32.24368499257058	0.27276751193237875	79.67667436489607	19	1	78.87323943661971	4	1	79.90147783251231	15	1	93.85749385749386	21	1	methylated (>=50%)	Q9WVL0	Maleylacetoacetate isomerase (MAAI) (EC 5.2.1.2) (GSTZ1-1) (Glutathione S-transferase zeta 1) (EC 2.5.1.18)	cellular detoxification [GO:1990748]; glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]; L-tyrosine catabolic process [GO:0006572]	hit with GO BP
GN017480	Chromosome_3A	2604	4	23	32.71889400921659	0.3315636504553381	59.229442208165615	23	0.6956521739130435	23.971377459749554	8	0.375	75.9322033898305	15	0.8666666666666667	57.291666666666664	41	0.5365853658536586	methylated (>=50%)	Q29IL2	Protein O-mannosyl-transferase 2 (EC 2.4.1.109) (Dolichyl-phosphate-mannose--protein mannosyltransferase 2) (Protein twisted)	muscle organ development [GO:0007517]	hit with GO BP
GN017481	Chromosome_3A	14001	7	306	35.19034354688951	0.7072005836794253	2.2220734890569576	306	0	7.098937954164338	42	0	1.558698296836983	264	0	1.185647425897036	58	0	unmethylated (<10%)	A8Y1P7	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN017482	Chromosome_3A	21028	4	243	36.51797603195739	0.34930404480888305	78.75894988066825	202	0.8663366336633663	38.10679611650485	8	0.25	81.25465653404858	194	0.8917525773195877	60.36542515811666	45	0.5333333333333333	methylated (>=50%)	Q6IUR5	Neudesin (Neuron-derived neurotrophic factor) (SCIRP10-related protein) (Spinal cord injury-related protein 10)	negative regulation of appetite [GO:0032099]; positive regulation of MAPK cascade [GO:0043410]	hit with GO BP
GN017483	Chromosome_3A	624	1	7	44.07051282051282	0.2608695652173913	0	7	0	0	7	0	NA	NA	NA	2.2861981371718882	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017484	Chromosome_3A	433	2	3	42.725173210161664	0.2162837162837163	0	3	0	0	3	0	NA	NA	NA	0.4062288422477996	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017118	Chromosome_3A	222	1	11	43.693693693693696	1.2149253731343284	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4153846153846155	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017485	Chromosome_3A	3258	10	36	35.666052793124614	0.35895882109902216	88.3390494855463	36	0.9444444444444444	88.79618593563767	16	0.9375	88.01996672212978	20	0.95	2.9980013324450367	53	0.018867924528301886	methylated (>=50%)	Q9VXK6	Eukaryotic translation initiation factor 5 (eIF-5)	formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	hit with GO BP
GN017486	Chromosome_3A	41381	19	350	34.6729175225345	0.2828213654144171	84.41339247164109	347	0.962536023054755	86.82223747426218	47	0.9787234042553191	84.10229136196428	300	0.96	89.15770609318996	15	0.9333333333333333	methylated (>=50%)	P46825	Kinesin light chain (KLC)	microtubule-based movement [GO:0007018]	hit with GO BP
GN017487	Chromosome_3A	40931	50	538	35.23979379932081	0.4271144897972682	82.55480529090741	488	0.8688524590163934	91.800878477306	130	0.9615384615384616	80.08827090575323	358	0.835195530726257	46.32768361581921	6	0.5	methylated (>=50%)	Q00963	Spectrin beta chain	actin cytoskeleton organization [GO:0030036]; axon guidance [GO:0007411]; axon midline choice point recognition [GO:0016199]; axonogenesis [GO:0007409]; long-term strengthening of neuromuscular junction [GO:0042062]; maintenance of presynaptic active zone structure [GO:0048790]; negative regulation of microtubule depolymerization [GO:0007026]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; neuron development [GO:0048666]; photoreceptor cell axon guidance [GO:0072499]; regulation of plasma membrane organization [GO:1903729]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN017488	Chromosome_3A	9143	9	155	34.868205184294	0.5591993765475333	79.60180995475113	154	0.974025974025974	85.40561031084155	43	0.9534883720930233	77.78174037089872	111	0.9819819819819819	83.71853074700785	48	0.9791666666666666	methylated (>=50%)	Q80T85	DDB1- and CUL4-associated factor 5 (WD repeat-containing protein 22)	protein catabolic process [GO:0030163]; protein ubiquitination [GO:0016567]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN017489	Chromosome_3A	501	1	17	44.31137724550898	0.712123745819398	1.0771992818671454	17	0	1.0771992818671454	17	0	NA	NA	NA	0.6852925672113864	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017490	Chromosome_3A	3108	5	86	36.196911196911195	0.8456768249468463	0.6179992275009656	77	0	1.0416666666666667	19	0	0.4694835680751174	58	0	0.5344418052256532	55	0	unmethylated (<10%)	Q99N01	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)	sodium-independent organic anion transport [GO:0043252]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN012560	Chromosome_3A	531	2	20	38.22975517890772	1.036502049580324	0	11	0	0	11	0	NA	NA	NA	3.591160220994475	25	0	unmethylated (<10%)	Q99N01	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)	sodium-independent organic anion transport [GO:0043252]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN017491	Chromosome_3A	967	2	9	34.22957600827301	0.3205524861878453	2.577319587628866	5	0	2.9411764705882355	3	0	0	2	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017492	Chromosome_3A	276	1	5	47.46376811594203	0.3248587570621469	81.06796116504854	5	1	81.06796116504854	5	1	NA	NA	NA	79.54016298020954	35	0.9142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017493	Chromosome_3A	162	1	4	51.851851851851855	0.4	93.65853658536585	4	1	93.65853658536585	4	1	NA	NA	NA	80.7495741056218	15	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017494	Chromosome_3A	24279	14	411	34.13237777503192	0.581512600634621	77.59769286229272	409	0.9559902200488998	92.18955682316806	40	1	76.5711816273614	369	0.9512195121951219	17.623305451398902	50	0.08	methylated (>=50%)	Q9Y6R9	Centrosomal protein CCDC61 (Coiled-coil domain-containing protein 61) (VFL3 homolog)	centriole assembly [GO:0098534]; mitotic spindle assembly [GO:0090307]	hit with GO BP
GN017495	Chromosome_3A	7892	4	80	33.21084642676128	0.36766230226853974	88.47622353349531	79	1	83.029197080291965	15	1	89.04871499808209	64	1	92.86075949367088	32	1	methylated (>=50%)	Q58D00	F-box/WD repeat-containing protein 2 (F-box and WD-40 domain-containing protein 2)	NA	hit, no GO BP
GN017496	Chromosome_3A	297	1	13	48.484848484848484	0.7566137566137566	0.34965034965034963	13	0	0.34965034965034963	13	0	NA	NA	NA	21.33696074621065	47	0.1702127659574468	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017497	Chromosome_3A	1918	3	23	40.198123044838376	0.29760507319705864	65.60077519379846	23	0.782608695652174	66.38743455497382	22	0.7727272727272727	55.84415584415584	1	1	31.789848619768478	39	0.3076923076923077	methylated (>=50%)	Q4R642	Dynein regulatory complex subunit 5 (T-complex-associated testis-expressed protein 1) (Tcte-1)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN017498	Chromosome_3A	1034	3	6	35.009671179883945	0.18951612903225806	76.04456824512535	6	1	76.01476014760148	4	1	76.13636363636364	2	1	82.29531140657802	42	0.9761904761904762	methylated (>=50%)	Q2T9V8	D-aminoacyl-tRNA deacylase 1 (DTD) (EC 3.1.1.96) (DNA-unwinding element-binding protein B) (DUE-B) (Gly-tRNA(Ala) deacylase)	tRNA metabolic process [GO:0006399]	hit with GO BP
GN017499	Chromosome_3A	2325	1	30	37.634408602150536	0.3646601210828445	67.94945433658816	30	0.7333333333333333	67.94945433658816	30	0.7333333333333333	NA	NA	NA	59.5959595959596	52	0.5961538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017500	Chromosome_3A	6324	5	48	34.234661606578115	0.25929456625357483	74.71698113207547	48	0.9166666666666666	74.30340557275542	5	1	74.76851851851852	43	0.9069767441860465	73.98373983739837	18	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017501	Chromosome_3A	21337	21	227	34.526878192810614	0.35827055183366363	79.95772482705611	225	0.8711111111111111	92.13759213759214	76	0.9736842105263158	75.66279674233235	149	0.8187919463087249	57.75623268698061	13	0.46153846153846156	methylated (>=50%)	Q6A070	TOG array regulator of axonemal microtubules protein 1 (Crescerin-1) (Protein FAM179B)	axoneme assembly [GO:0035082]; cilium assembly [GO:0060271]; microtubule cytoskeleton organization [GO:0000226]; non-motile cilium assembly [GO:1905515]; positive regulation of microtubule polymerization [GO:0031116]	hit with GO BP
GN017502	Chromosome_3A	50177	31	571	34.02156366462722	0.39356494860054614	74.30492693650588	563	0.8632326820603907	81.203984408835	41	0.9024390243902439	73.86676202002421	522	0.8601532567049809	30.04820567755758	30	0.3	methylated (>=50%)	A0JN53	RNA polymerase II-associated protein 1	transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN001616	Chromosome_3A	709	2	7	35.26093088857546	0.3205865254182546	NA	0	NA	NA	NA	NA	NA	NA	NA	2.272727272727273	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017517	Chromosome_3A	5891	2	145	34.39144457647259	0.8357475444513259	0.5410279531109107	144	0	0.4752851711026616	46	0	0.5614657210401891	98	0	0.6464445549477872	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017516	Chromosome_3A	1314	1	43	41.93302891933029	0.7448390413667643	0.4192872117400419	43	0	0.4192872117400419	43	0	NA	NA	NA	1.36986301369863	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017515	Chromosome_3A	840	2	19	38.333333333333336	0.6244131455399061	40.67611777535441	19	0.42105263157894735	47.35413839891452	16	0.5	13.333333333333334	3	0	0.7606787595084845	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017514	Chromosome_3A	8238	4	105	34.55935906773489	0.4269969867979891	79.5697392790996	102	0.8529411764705882	36.111111111111114	12	0.3333333333333333	84.2620363062352	90	0.9222222222222223	52.04582651391162	44	0.45454545454545453	methylated (>=50%)	Q8TDP1	Ribonuclease H2 subunit C (RNase H2 subunit C) (Aicardi-Goutieres syndrome 3 protein) (AGS3) (RNase H1 small subunit) (Ribonuclease HI subunit C)	mismatch repair [GO:0006298]; RNA catabolic process [GO:0006401]	hit with GO BP
GN017513	Chromosome_3A	19056	16	153	35.542611251049536	0.2559702314134653	83.38998413777476	149	0.9530201342281879	83.85689354275742	46	0.9565217391304348	83.22620140801959	103	0.9514563106796117	83.48323793949305	18	1	methylated (>=50%)	O15040	Tectonin beta-propeller repeat-containing protein 2 (WD repeat-containing protein KIAA0329/KIAA0297)	protein exit from endoplasmic reticulum [GO:0032527]	hit with GO BP
GN017512	Chromosome_3A	738	1	10	38.482384823848236	0.3682083520431073	0.45592705167173253	10	0	0.45592705167173253	10	0	NA	NA	NA	0.71571714858288	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017511	Chromosome_3A	567	1	21	41.44620811287478	0.8681102362204725	0.5313496280552603	21	0	0.5313496280552603	21	0	NA	NA	NA	0.5383580080753702	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017510	Chromosome_3A	1302	1	47	40.62980030721966	0.8749499571060909	0.6024096385542169	47	0	0.6024096385542169	47	0	NA	NA	NA	0.41736227045075125	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017509	Chromosome_3A	1386	1	33	39.03318903318903	0.6380147304988283	5.188679245283019	15	0	5.188679245283019	15	0	NA	NA	NA	4.375764993880049	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017508	Chromosome_3A	952	2	28	44.85294117647059	0.6077519379844961	8.860759493670885	11	0	8.860759493670885	11	0	NA	NA	NA	0.6807511737089202	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017507	Chromosome_3A	10951	6	269	34.773080084010594	0.8127314226625846	0.8015903552648455	269	0	0.5691768826619965	42	0	0.8414725770097671	227	0	0.48629531388152075	44	0	unmethylated (<10%)	Q5EGE1	Isthmin-1	angiogenesis [GO:0001525]; antiviral innate immune response [GO:0140374]; embryonic hemopoiesis [GO:0035162]; erythrocyte differentiation [GO:0030218]; hematopoietic stem cell proliferation [GO:0071425]; negative regulation of angiogenesis [GO:0016525]	hit with GO BP
GN017506	Chromosome_3A	26964	10	417	36.096276516837264	0.47484737846719405	79.55326460481099	377	0.8541114058355438	70.1095461658842	14	0.7142857142857143	79.83424128137077	363	0.859504132231405	0.26881720430107525	52	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017505	Chromosome_3A	6420	3	123	35.59190031152648	0.6050728468905021	79.36440226085102	123	0.8373983739837398	35.72159672466735	19	0.3684210526315789	84.44047619047619	104	0.9230769230769231	1.0926750303520842	56	0	methylated (>=50%)	Q80XC2	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A (EC 2.1.1.220) (mRNA methyladenosine-N(1)-methyltransferase catalytic subunit TRMT61A) (EC 2.1.1.-) (tRNA(m1A58)-methyltransferase subunit TRMT61A) (tRNA(m1A58)MTase subunit TRMT61A)	mRNA processing [GO:0006397]; tRNA methylation [GO:0030488]	hit with GO BP
GN017504	Chromosome_3A	8744	10	232	36.90530649588289	0.7799248759145415	32.28520814880425	224	0.27232142857142855	58.21247892074199	60	0.5166666666666667	23.05105105105105	164	0.18292682926829268	0.9799918334013883	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017503	Chromosome_3A	38189	39	373	36.09154468564246	0.3007619543743734	82.19317512187283	337	0.913946587537092	90.28793418647166	84	1	79.71450563291582	253	0.8853754940711462	17.539267015706805	28	0.21428571428571427	methylated (>=50%)	A1A5F2	HEAT repeat-containing protein 5B	axis elongation [GO:0003401]; endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN017519	Chromosome_3A	396	2	7	41.16161616161616	0.42738205365402404	1.7721518987341771	7	0	1.7721518987341771	7	0	NA	NA	NA	0.8817766165904638	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017521	Chromosome_3A	8615	3	124	35.96053395240859	0.44735405066768513	81.24644280022765	124	0.8709677419354839	80.72805139186295	10	0.9	81.28334095412285	114	0.868421052631579	1.7027863777089782	71	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017520	Chromosome_3A	39400	30	545	34.41624365482234	0.4682480175399911	83.21708307129381	534	0.8726591760299626	84.09376308078694	47	0.851063829787234	83.15282422606082	487	0.8747433264887063	2.3009495982468957	54	0	methylated (>=50%)	B5DG42	Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3)	mRNA splicing, via spliceosome [GO:0000398]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN017523	Chromosome_3A	15844	9	209	35.79904064630144	0.4118348499712459	87.55310110450297	208	0.9711538461538461	73.26343381389253	14	0.8571428571428571	88.24689786827871	194	0.979381443298969	0.6799637352674524	44	0	methylated (>=50%)	A6H8J1	Protein PRRC1-A (Proline-rich and coiled-coil-containing protein 1-A)	epithelial structure maintenance [GO:0010669]	hit with GO BP
GN017524	Chromosome_3A	1869	1	87	39.165329052969504	1.2139988054352695	0.5532053368044256	87	0	0.5532053368044256	87	0	NA	NA	NA	0.3748558246828143	37	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN017532	Chromosome_3A	329	1	14	42.857142857142854	0.9373219373219374	0.11933174224343675	14	0	0.11933174224343675	14	0	NA	NA	NA	0.44275774826059455	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017530	Chromosome_3A	306	1	13	42.48366013071895	0.9496299832895679	0.20491803278688525	13	0	0.20491803278688525	13	0	NA	NA	NA	0.41055718475073316	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017526	Chromosome_3A	279	1	7	40.50179211469534	0.6295938104448743	0.8272058823529411	7	0	0.8272058823529411	7	0	NA	NA	NA	0.5573020863103744	45	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017527	Chromosome_3A	9938	10	327	37.90501106862548	0.91606088794926	0.7111869710546903	325	0	0.590292960209882	98	0	0.7694740170759987	227	0	0.33222591362126247	4	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017540	Chromosome_3A	5514	5	131	35.45520493289808	0.7567557940480706	0.57479957646347	130	0	0.48231511254019294	64	0	0.6306087800145526	66	0	0.6203473945409429	39	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017539	Chromosome_3A	1713	1	69	39.988324576765905	1.0127756927664386	0.5638474295190713	69	0	0.5638474295190713	69	0	NA	NA	NA	0.16611295681063123	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017538	Chromosome_3A	8633	5	222	36.383644156145024	0.7786457719681574	0.7883242782571641	210	0	0.8534136546184738	51	0	0.77079107505071	159	0	1.2131715771230502	45	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017537	Chromosome_3A	5323	5	149	35.168138267894044	0.9083201630820679	1.2032660077352815	144	0	0.918580375782881	49	0	1.3519406890536416	95	0	1.3520540821632865	57	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017536	Chromosome_3A	9369	5	257	36.1618102252108	0.8390913348750266	0.9497356867664187	244	0	0.9219088937093276	50	0	0.9552431040034346	194	0	0.57958091841284	51	0	unmethylated (<10%)	P86789	Gigasin-6	NA	hit, no GO BP
GN017535	Chromosome_3A	1040	2	29	33.94230769230769	0.9694631951141112	0.49261083743842365	23	0	0.5215123859191656	21	0	0	2	0	0.5685407454200885	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017534	Chromosome_3A	1268	2	41	38.564668769716086	0.8702668318323346	0.6818181818181818	41	0	0.6269592476489029	28	0	0.8264462809917356	13	0	0.9943181818181818	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017545	Chromosome_3A	9259	4	155	34.96057889620909	0.5496563367249001	84.5660249915569	152	0.9342105263157895	83.38557993730407	9	0.8888888888888888	84.6332321970373	143	0.9370629370629371	81.74733388022969	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017546	Chromosome_3A	26304	20	248	35.41286496350365	0.3012277050404839	68.34363047955281	238	0.7941176470588235	58.56405443453777	43	0.7209302325581395	70.16136066288705	195	0.8102564102564103	63.343283582089555	43	0.6744186046511628	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017565	Chromosome_3A	2748	3	59	39.26491994177584	0.5570780648708081	1.0744130521289295	59	0	0.5154639175257731	9	0	1.1764705882352942	50	0	1.1428571428571428	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017564	Chromosome_3A	36845	22	835	35.64119962002985	0.7136277859871081	1.3688813758635896	824	0	0.7380073800738007	126	0	1.462704208704462	698	0	4.886841578209493	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017563	Chromosome_3A	59249	36	1556	35.460514101503826	0.8357611016803267	0.9681963612052911	1538	0	0.6192224335441638	448	0	1.097212002289265	1090	0	0.5553498704183636	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017566	Chromosome_3A	177	1	2	43.50282485875706	0.24583333333333332	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8695652173913043	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017559	Chromosome_3A	444	1	14	45.04504504504504	0.642414220752377	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6313131313131313	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017572	Chromosome_3A	177	1	2	43.50282485875706	0.24583333333333332	NA	0	NA	NA	NA	NA	NA	NA	NA	13.043478260869565	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017576	Chromosome_3A	234	1	6	48.717948717948715	0.43548387096774194	0	6	0	0	6	0	NA	NA	NA	0.6318449873631002	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017575	Chromosome_3A	2854	3	88	35.31885073580939	0.9924798956748533	0.4634180592613397	88	0	0.30060120240480964	17	0	0.4899559039686428	71	0	0.4055619930475087	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017574	Chromosome_3A	1527	1	40	41.2573673870334	0.6302039805614882	0.5043227665706052	40	0	0.5043227665706052	40	0	NA	NA	NA	1.5578635014836795	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017573	Chromosome_3A	4052	2	111	36.54985192497532	0.8212943586821951	0.45848191543555783	111	0	0.47046523784631467	109	0	0	2	0	0.4046398705152414	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017578	Chromosome_3A	14935	5	403	38.0046869768999	0.7473786882762423	0.7287501612279118	368	0	0.82063305978898	20	0	0.7234013512591279	348	0	0.8771929824561403	63	0	unmethylated (<10%)	Q00719	O-methyltransferase MdmC (EC 2.1.1.-)	NA	hit, no GO BP
GN017586	Chromosome_3A	2540	2	74	40.70866141732284	0.7064465692464971	0.6531204644412192	74	0	0.6242905788876277	57	0	0.704225352112676	17	0	0.38113387327298714	55	0	unmethylated (<10%)	P86733	BPTI/Kunitz domain-containing protein	NA	hit, no GO BP
GN017585	Chromosome_3A	1032	1	36	49.41860465116279	0.5857627118644068	0.25094102885821834	34	0	0.25094102885821834	34	0	NA	NA	NA	4.952076677316294	57	0.07017543859649122	unmethylated (<10%)	P86963	BPTI/Kunitz domain-containing protein 2 (Nacre serine protease inhibitor 1) (NSPI1)	NA	hit, no GO BP
GN017584	Chromosome_3A	10747	3	261	36.00074439378431	0.7495867203204261	0.8189321640443642	258	0	0.5571030640668524	77	0	0.8878390486275148	181	0	0.9327115256495669	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017583	Chromosome_3A	1688	2	45	34.774881516587676	0.8817998189036707	0.6920415224913494	45	0	0.8097165991902834	19	0	0.6451612903225806	26	0	0.8220979940808945	67	0	unmethylated (<10%)	H2A0N5	BPTI/Kunitz domain-containing protein 3 (Nacre serine protease inhibitor 2)	NA	hit, no GO BP
GN017582	Chromosome_3A	2634	4	79	36.75018982536067	0.8890284542425019	0.6176652254478073	79	0	0.6644518272425249	57	0	0.5305039787798409	22	0	0.68359375	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017593	Chromosome_3A	1665	1	61	40.54054054054054	0.9053430079155673	0.5862646566164154	61	0	0.5862646566164154	61	0	NA	NA	NA	0.8704735376044568	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017592	Chromosome_3A	1827	3	65	36.7816091954023	1.051934592353754	0.7299270072992701	65	0	0.834326579261025	54	0	0.38910505836575876	11	0	0.7670569236980218	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017591	Chromosome_3A	309	1	0	52.750809061488674	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4312383322962041	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017590	Chromosome_3A	7174	5	71	36.96682464454976	0.2911840553471171	77.36920777279522	71	0.9295774647887324	59.89010989010989	7	0.7142857142857143	79.50352230795035	64	0.953125	60.107816711590296	5	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017589	Chromosome_3A	1635	1	50	38.960244648318046	0.8065948377930381	0.8188824662813102	50	0	0.8188824662813102	50	0	NA	NA	NA	19.153776160145586	48	0.125	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017588	Chromosome_3A	12488	5	325	34.7773862908392	0.8610089754022893	0.5046120455778622	323	0	0.5410279531109107	47	0	0.4996299037749815	276	0	0.4626060138781804	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017587	Chromosome_3A	1310	2	18	39.770992366412216	0.3477670933868208	0.7163323782234957	18	0	0.6097560975609756	17	0	2.380952380952381	1	0	2.2222222222222223	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017598	Chromosome_3A	396	1	21	38.13131313131313	1.4604847207586933	0.45280390107976315	17	0	0.45280390107976315	17	0	NA	NA	NA	0.41420118343195267	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017597	Chromosome_3A	396	1	23	51.76767676767677	0.8685866870112531	0.5457025920873124	23	0	0.5457025920873124	23	0	NA	NA	NA	0.7257771864037741	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010785	Chromosome_3A	707	1	29	41.018387553041016	0.9887635030864198	0.2476780185758514	29	0	0.2476780185758514	29	0	NA	NA	NA	1.028497964431112	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017599	Chromosome_3A	14700	6	424	34.10204081632653	0.9922597119759545	3.10410900574835	418	0	2.2481502561183837	72	0	3.2547193430474186	346	0	2.502261079288514	52	0	unmethylated (<10%)	P53405	Insulin gene enhancer protein isl-1 (Islet-1)	atrial cardiac muscle cell differentiation [GO:0055011]; axon extension [GO:0048675]; axonogenesis [GO:0007409]; endocrine pancreas development [GO:0031018]; exocrine pancreas development [GO:0031017]; GABAergic neuron differentiation [GO:0097154]; heart development [GO:0007507]; neuron development [GO:0048666]; neuron fate specification [GO:0048665]; pancreatic A cell development [GO:0003322]; pancreatic D cell development [GO:0003324]; peripheral nervous system neuron axonogenesis [GO:0048936]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of heart contraction [GO:0008016]; sinoatrial node cell development [GO:0060931]; spinal cord association neuron differentiation [GO:0021527]; spinal cord motor neuron differentiation [GO:0021522]; type B pancreatic cell development [GO:0003323]	hit with GO BP
GN017600	Chromosome_3A	18310	8	223	34.50573457127253	0.4136198669793046	50.091743119266056	222	0.536036036036036	28.316690442225394	47	0.3829787234042553	55.734220497181404	175	0.5771428571428572	0.5090677696468342	69	0	methylated (>=50%)	Q95WY0	Tropomyosin (Allergen Cra g 1.03) (allergen Cra g 1)	regulation of muscle contraction [GO:0006937]	hit with GO BP
GN017601	Chromosome_3A	1510	3	55	38.211920529801326	0.9978133410226836	0.42081101759755163	55	0	0.43440486533449174	27	0	0.4101161995898838	28	0	0.43878894251864853	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017617	Chromosome_3A	1644	1	44	41.90997566909976	0.6101832169247899	0.1557632398753894	29	0	0.1557632398753894	29	0	NA	NA	NA	18.515081206496518	34	0.08823529411764706	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017616	Chromosome_3A	1401	1	33	45.25339043540328	0.4687043795620438	1.9230769230769231	4	0	1.9230769230769231	4	0	NA	NA	NA	1.4861995753715498	34	0	NA	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN017615	Chromosome_3A	9790	10	58	37.07865168539326	0.17675721393375543	46.90123950419832	45	0.35555555555555557	48.369565217391305	8	0.5	46.64791373652133	37	0.32432432432432434	58.5515907892424	53	0.8113207547169812	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017614	Chromosome_3A	702	1	5	52.99145299145299	0.10175092764378478	0	4	0	0	4	0	NA	NA	NA	0.6279434850863422	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017613	Chromosome_3A	321	1	10	42.05607476635514	0.7076719576719577	0.6410256410256411	8	0	0.6410256410256411	8	0	NA	NA	NA	2.1555763823805063	30	0.06666666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017612	Chromosome_3A	2505	2	78	36.48702594810379	0.9367044915217673	0.7595321282090233	78	0	0.9328736564591361	59	0	0.24213075060532688	19	0	2.519051651143099	39	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN017604	Chromosome_3A	2506	2	78	36.472466081404626	0.936216682232919	0.7188498402555911	78	0	0.4952947003467063	42	0	0.9786989061600461	36	0	0.8666480290746436	47	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN017611	Chromosome_3A	876	1	26	38.470319634703195	0.8439931816497444	1.450777202072539	17	0	1.450777202072539	17	0	NA	NA	NA	1.4263685427910562	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017610	Chromosome_3A	20112	7	440	35.8840493237868	0.6821488775001442	0.8745305828489119	440	0	0.5068423720223011	54	0	0.9160654986831559	386	0	0.7029226785053644	49	0	unmethylated (<10%)	P04755	Acetylcholine receptor subunit beta-like 1 (Nicotinic acetylcholine receptor beta 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN017609	Chromosome_3A	8262	5	182	35.862987170176716	0.6851052158216019	0.699227718639115	182	0	0.5615550755939525	62	0	0.7430851795789184	120	0	0.8721804511278195	60	0	unmethylated (<10%)	P91766	Acetylcholine receptor subunit alpha-like (MARA1)	synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN017608	Chromosome_3A	7834	5	194	37.80954812356395	0.6929329588561424	0.8180188256387271	191	0	0.6105538595726123	56	0	0.8897602171618157	135	0	0.7525586995785671	59	0	unmethylated (<10%)	P09478	Acetylcholine receptor subunit alpha-like 1 (Nicotinic acetylcholine receptor alpha 1)	calcium ion transport [GO:0006816]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; response to insecticide [GO:0017085]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN017607	Chromosome_3A	29280	9	399	36.827185792349724	0.40278968971590495	77.98273512039982	389	0.8997429305912596	73.26273990734613	34	0.8529411764705882	78.3306502756232	355	0.9042253521126761	82.77945619335347	21	1	methylated (>=50%)	Q2NKJ3	CST complex subunit CTC1 (Conserved telomere maintenance component 1) (HBV DNAPTP1-transactivated protein B)	negative regulation of telomere maintenance via telomerase [GO:0032211]; positive regulation of DNA replication [GO:0045740]; telomere capping [GO:0016233]; telomere maintenance [GO:0000723]; telomere maintenance via telomere lengthening [GO:0010833]	hit with GO BP
GN020204	Chromosome_3A	17320	19	389	36.36258660508083	0.7058411870948276	1.2744310575635878	388	0	0.6808510638297872	113	0	1.4125412541254125	275	0	0.5530973451327433	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020203	Chromosome_3A	9372	6	72	30.14297908664106	0.3435141084406289	88.90905424480742	71	0.9859154929577465	87.96992481203007	4	1	88.96228425314298	67	0.9850746268656716	63.793103448275865	12	0.75	methylated (>=50%)	B5G1P1	Intraflagellar transport protein 43 homolog	cilium assembly [GO:0060271]; intraciliary retrograde transport [GO:0035721]	hit with GO BP
GN020202	Chromosome_3A	9539	10	110	34.3117727225076	0.391866809576983	74.64688257954059	108	0.8333333333333334	62.30259806418747	34	0.6764705882352942	79.4490685691637	74	0.9054054054054054	32.71221532091097	33	0.36363636363636365	methylated (>=50%)	Q96L03	Spermatogenesis-associated protein 17	NA	hit, no GO BP
GN020201	Chromosome_3A	3734	5	32	34.97589716122121	0.2808119217219847	45	32	0.46875	41.85639229422067	13	0.5384615384615384	46.414499605988965	19	0.42105263157894735	29.79635584137192	33	0.30303030303030304	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020200	Chromosome_3A	22465	9	285	35.25484086356555	0.4100914841513151	78.28825282573244	283	0.8621908127208481	45.76271186440678	38	0.47368421052631576	80.59989158585797	245	0.9224489795918367	0.9336445481827276	42	0	methylated (>=50%)	Q7Z6M2	F-box only protein 33	positive regulation of protein ubiquitination [GO:0031398]; protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN017620	Chromosome_3A	1367	2	72	52.30431602048281	0.7709008881996334	0.40858018386108275	57	0	0.4744958481613286	54	0	0	3	0	0.6809037449705974	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017619	Chromosome_3A	1388	2	65	51.22478386167147	0.715237038211511	0.44404973357015987	65	0	0.4826254826254826	63	0	0	2	0	0.32023289665211063	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017618	Chromosome_3A	1325	3	44	48.22641509433962	0.5716246690852045	0.38095238095238093	40	0	0.42105263157894735	36	0	0	4	0	0.7631257631257631	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017624	Chromosome_3A	7559	6	96	36.07620055562905	0.3905459195425806	85.45800920781076	96	0.9791666666666666	91.8284789644013	48	0.9583333333333334	81.34308858113405	48	1	93.1378132118451	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017623	Chromosome_3A	1944	1	1	36.47119341563786	0.01614430215755643	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017636	Chromosome_3A	1401	1	38	45.32476802284083	0.5387043895331188	0.677710843373494	38	0	0.677710843373494	38	0	NA	NA	NA	1.0176754151044456	62	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN017635	Chromosome_3A	516	1	14	39.14728682170543	0.7115839243498818	1.4209591474245116	14	0	1.4209591474245116	14	0	NA	NA	NA	3.080568720379147	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017634	Chromosome_3A	504	2	18	40.87301587301587	0.8689655172413793	0.9925558312655087	18	0	1.3307984790874525	14	0	0.35714285714285715	4	0	3.56017059150751	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017633	Chromosome_3A	3303	2	94	36.33060853769301	0.8657422252956382	0.6690561529271206	94	0	1.4883720930232558	48	0	0.3858520900321543	46	0	0.3966505068312032	41	0	unmethylated (<10%)	P43699	Homeobox protein Nkx-2.1 (Homeobox protein NK-2 homolog A) (Thyroid nuclear factor 1) (Thyroid transcription factor 1) (TTF-1) (Thyroid-specific enhancer-binding protein) (T/EBP)	brain development [GO:0007420]; cell differentiation [GO:0030154]; epithelial tube branching involved in lung morphogenesis [GO:0060441]; forebrain development [GO:0030900]; gene expression [GO:0010467]; globus pallidus development [GO:0021759]; hypothalamus development [GO:0021854]; lung development [GO:0030324]; negative regulation of cell migration [GO:0030336]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of circadian rhythm [GO:0042753]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; response to hormone [GO:0009725]; thyroid gland development [GO:0030878]	hit with GO BP
GN017632	Chromosome_3A	28456	16	362	35.816699465842	0.40130536113100546	85.83413331107309	341	0.9325513196480938	73.14504547630445	38	0.7368421052631579	87.04618198445358	303	0.9570957095709571	1.1267605633802817	12	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017631	Chromosome_3A	10594	11	138	34.613932414574286	0.4350602162249025	74.9848759830611	138	0.9347826086956522	76.81862269641125	18	0.9444444444444444	74.82982038874765	120	0.9333333333333333	48.68238557558946	28	0.5	methylated (>=50%)	Q6DF46	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial (EC 1.14.15.45) (2-methoxy-6-polyprenolphenol 4-hydroxylase) (EC 1.14.15.46) (Coenzyme Q10 monooxygenase 6)	ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN017630	Chromosome_3A	6258	5	70	35.79418344519016	0.35384033808933	73.05712184358912	70	0.7857142857142857	68.05231200373657	41	0.6829268292682927	78.58617131062951	29	0.9310344827586207	66.97350696003592	29	0.7931034482758621	methylated (>=50%)	Q66KE9	Protein FAM161A	cilium organization [GO:0044782]	hit with GO BP
GN017629	Chromosome_3A	13881	23	197	34.67329443123694	0.4738969582844196	91.02341137123746	196	1	95.1719975859988	33	1	90.50628150154216	163	1	81.85064935064935	36	1	methylated (>=50%)	Q80U96	Exportin-1 (Exp1) (Chromosome region maintenance 1 protein homolog)	cellular response to salt [GO:1902075]; cellular response to triglyceride [GO:0071401]; mRNA export from nucleus [GO:0006406]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nucleocytoplasmic transport [GO:0006913]; protein export from nucleus [GO:0006611]; protein localization to nucleus [GO:0034504]; regulation of centrosome duplication [GO:0010824]; regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032434]; regulation of protein catabolic process [GO:0042176]; regulation of protein export from nucleus [GO:0046825]; response to xenobiotic stimulus [GO:0009410]; ribosomal large subunit export from nucleus [GO:0000055]; ribosomal small subunit export from nucleus [GO:0000056]; ribosomal subunit export from nucleus [GO:0000054]; ribosome biogenesis [GO:0042254]	hit with GO BP
GN017628	Chromosome_3A	507	1	21	42.01183431952663	0.9397175639894086	0.5376344086021505	21	0	0.5376344086021505	21	0	NA	NA	NA	0.5145797598627787	54	0	unmethylated (<10%)	Q24157	Beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase brn (EC 2.4.1.-) (Glycolipid-specific beta-1,3-N-Acetylglucosaminyltransferase brn) (Neurogenic secreted-signaling protein brn) (Protein brainiac) (UDP-GlcNAc:beta-Man/beta-Gal beta-1,3GlcNAc transferase) (beta3GlcNAc-transferase)	arthro-series glucosylceramide biosynthetic process [GO:0140269]; border follicle cell migration [GO:0007298]; follicle cell of egg chamber development [GO:0030707]; follicle cell of egg chamber-cell adhesion [GO:0007299]; germarium-derived egg chamber formation [GO:0007293]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; insect visual primordium formation [GO:0001744]; maintenance of polarity of follicular epithelium [GO:0042248]; morphogenesis of follicular epithelium [GO:0016333]	hit with GO BP
GN017627	Chromosome_3A	198	1	0	44.44444444444444	0	NA	0	NA	NA	NA	NA	NA	NA	NA	93.69369369369369	14	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017626	Chromosome_3A	11141	8	167	36.630464051700926	0.44755241559141334	84.03715407449967	167	0.9760479041916168	77.87325456498388	17	0.9411764705882353	84.64045416316232	150	0.98	70.56947608200456	31	0.9354838709677419	methylated (>=50%)	C4JF79	Peptidase uncH (EC 3.4.14.-) (Isoindolinone tripeptide biosynthesis cluster protein H)	proteolysis [GO:0006508]	hit with GO BP
GN017625	Chromosome_3A	852	1	33	62.20657276995305	0.5222042681228061	88.38487972508591	33	1	88.38487972508591	33	1	NA	NA	NA	69.01110523532522	25	0.92	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017639	Chromosome_3A	20314	11	307	35.05464211873585	0.4933668700132463	88.16713973291145	304	0.9276315789473685	58.830694275274055	18	0.7222222222222222	89.33236574746009	286	0.9405594405594405	54.519613416714044	32	0.59375	methylated (>=50%)	O15381	Nuclear valosin-containing protein-like (NVLp) (Nuclear VCP-like protein)	positive regulation of protein binding [GO:0032092]; positive regulation of telomere maintenance [GO:0032206]; regulation of protein localization to nucleolus [GO:1904749]; ribosomal large subunit biogenesis [GO:0042273]; ribosome biogenesis [GO:0042254]; rRNA processing [GO:0006364]; telomerase holoenzyme complex assembly [GO:1905323]	hit with GO BP
GN017640	Chromosome_3A	900	2	11	37.22222222222222	0.3559102674719586	95.92668024439918	11	1	95.91836734693878	5	1	95.93023255813954	6	1	85.62874251497006	4	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017641	Chromosome_3A	571	2	2	37.3029772329247	0.1031616982836495	85.08771929824562	2	1	85.08771929824562	2	1	NA	NA	NA	77.54137115839244	11	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017642	Chromosome_3A	567	2	0	37.38977072310406	0	NA	0	NA	NA	NA	NA	NA	NA	NA	79.43805874840358	9	0.8888888888888888	NA	NA	NA	NA	no Swiss-Prot hit
GN017643	Chromosome_3A	11021	13	165	35.56846021232193	0.47545297670405523	89.8872034227927	165	0.9878787878787879	86.6887730933207	39	0.9743589743589743	90.5156366344006	126	0.9920634920634921	91.62541254125412	32	1	methylated (>=50%)	Q9DBY8	Nuclear valosin-containing protein-like (NVLp) (Nuclear VCP-like protein)	positive regulation of protein binding [GO:0032092]; positive regulation of telomere maintenance [GO:0032206]; regulation of protein localization to nucleolus [GO:1904749]; ribosomal large subunit biogenesis [GO:0042273]; ribosome biogenesis [GO:0042254]; rRNA processing [GO:0006364]; telomerase holoenzyme complex assembly [GO:1905323]	hit with GO BP
GN017644	Chromosome_3A	2215	3	70	39.14221218961625	0.8259994033412887	0.5308392315470172	70	0	0.5539263603779733	58	0	0.4509582863585118	12	0	0.5458089668615984	86	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017645	Chromosome_3A	681	2	40	53.45080763582966	0.9425931693138171	0.6530612244897959	40	0	0.7858546168958742	31	0	0	9	0	0.5775895263765883	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017646	Chromosome_3A	1392	1	61	42.025862068965516	0.9924959674591486	0.6481128478841022	61	0	0.6481128478841022	61	0	NA	NA	NA	0.7239819004524887	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017659	Chromosome_3A	1335	1	38	40.97378277153558	0.6873052431919794	1.4394580863674853	38	0	1.4394580863674853	38	0	NA	NA	NA	0.5384063173007897	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017658	Chromosome_3A	5740	4	166	35.34843205574913	0.9258244427602558	3.6397527715098597	164	0	0.5061867266591676	73	0	5.318668072924514	91	0	0.7153075822603719	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017657	Chromosome_3A	53523	14	879	34.02462492760122	0.5677013549762707	85.2736392902598	665	0.9488721804511279	82.19832735961768	29	0.9655172413793104	85.4077141443342	636	0.9481132075471698	91.7254650416934	27	1	methylated (>=50%)	Q8WUB8	PHD finger protein 10 (BRG1-associated factor 45a) (BAF45a) (XAP135)	chromatin remodeling [GO:0006338]; positive regulation of cell differentiation [GO:0045597]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of T cell differentiation [GO:0045582]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017656	Chromosome_3A	996	1	48	47.69076305220884	0.8475994610311326	2.5049439683586026	48	0	2.5049439683586026	48	0	NA	NA	NA	5.2631578947368425	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017653	Chromosome_3A	8819	4	107	32.37328495294251	0.4689288362265171	71.28436092560956	107	0.794392523364486	48.84233737596472	16	0.4375	74.96384671005062	91	0.8571428571428571	64.5810663764962	42	0.6904761904761905	methylated (>=50%)	Q3T0C9	Synaptojanin-2-binding protein (Activin receptor-interacting protein 2) (Mitochondrial outer membrane protein 25)	negative regulation of angiogenesis [GO:0016525]; negative regulation of endothelial cell migration [GO:0010596]; negative regulation of endothelial cell proliferation [GO:0001937]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of sprouting angiogenesis [GO:1903671]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN017652	Chromosome_3A	14561	7	189	34.317697960304926	0.44113845221664927	84.15879597634954	188	0.925531914893617	91.99346405228758	21	0.9523809523809523	83.34604627510807	167	0.9221556886227545	50.743801652892564	54	0.5555555555555556	methylated (>=50%)	Q5RET9	Splicing regulator SDE2 (Replication stress response regulator SDE2)	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000479]; mRNA cis splicing, via spliceosome [GO:0045292]	hit with GO BP
GN017651	Chromosome_3A	9668	6	133	39.987587918907735	0.35199979851999796	78.8193059433586	133	0.8571428571428571	59.786476868327405	12	0.5833333333333334	80.35637304210375	121	0.8842975206611571	6.02589641434263	32	0	methylated (>=50%)	P99029	Peroxiredoxin-5, mitochondrial (EC 1.11.1.24) (Antioxidant enzyme B166) (AOEB166) (Liver tissue 2D-page spot 2D-0014IV) (PLP) (Peroxiredoxin V) (Prx-V) (Peroxisomal antioxidant enzyme) (Thioredoxin peroxidase PMP20) (Thioredoxin-dependent peroxiredoxin 5)	cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; cellular response to reactive oxygen species [GO:0034614]; hydrogen peroxide catabolic process [GO:0042744]; negative regulation of apoptotic process [GO:0043066]; negative regulation of oxidoreductase activity [GO:0051354]; negative regulation of transcription by RNA polymerase III [GO:0016480]; positive regulation of collagen biosynthetic process [GO:0032967]; reactive nitrogen species metabolic process [GO:2001057]; regulation of apoptosis involved in tissue homeostasis [GO:0060785]; response to oxidative stress [GO:0006979]	hit with GO BP
GN017650	Chromosome_3A	907	2	12	37.48621830209482	0.3795640802092415	81.42620232172472	12	1	81.54761904761905	5	1	81.37931034482759	7	1	73.43173431734317	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017649	Chromosome_3A	1876	2	28	37.79317697228145	0.419124218051832	82.42710795902285	28	0.9642857142857143	86.27450980392157	5	1	81.69014084507042	23	0.9565217391304348	85.28198074277854	40	0.975	methylated (>=50%)	Q9DBY8	Nuclear valosin-containing protein-like (NVLp) (Nuclear VCP-like protein)	positive regulation of protein binding [GO:0032092]; positive regulation of telomere maintenance [GO:0032206]; regulation of protein localization to nucleolus [GO:1904749]; ribosomal large subunit biogenesis [GO:0042273]; ribosome biogenesis [GO:0042254]; rRNA processing [GO:0006364]; telomerase holoenzyme complex assembly [GO:1905323]	hit with GO BP
GN017648	Chromosome_3A	2274	2	28	34.38874230430959	0.4198449121696471	81.89320388349515	27	0.8888888888888888	70.83333333333333	3	0.6666666666666666	82.15705765407554	24	0.9166666666666666	72.73402674591382	24	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017647	Chromosome_3A	1008	1	16	38.98809523809524	0.43347847121432026	5.217391304347826	4	0	5.217391304347826	4	0	NA	NA	NA	5.925925925925926	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017661	Chromosome_3A	7362	3	82	36.04998641673458	0.3461951360502085	75.10764814435103	82	0.8170731707317073	69.7268588770865	31	0.7419354838709677	77.10030907558303	51	0.8627450980392157	31.023784901758013	25	0.36	methylated (>=50%)	Q8TBZ3	WD repeat-containing protein 20 (Protein DMR)	negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; positive regulation of canonical Wnt signaling pathway [GO:0090263]	hit with GO BP
GN017660	Chromosome_3A	6089	2	119	37.690918048940716	0.5505358027467868	90.73431241655541	119	0.9915966386554622	90.78947368421052	16	1	90.72666463970812	103	0.9902912621359223	87.01594533029613	15	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017666	Chromosome_3A	8848	3	250	32.888788426763114	1.0450051399891154	1.25397492050159	250	0	1.0526315789473684	34	0	1.2813522355507088	216	0	3.018968741651082	45	0	unmethylated (<10%)	P54366	Homeobox protein goosecoid	negative regulation of DNA-templated transcription [GO:0045892]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017667	Chromosome_3A	1014	1	42	44.87179487179487	0.8249651324965133	0.5161290322580645	32	0	0.5161290322580645	32	0	NA	NA	NA	3.0396902226524687	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017668	Chromosome_3A	1215	1	48	40.5761316872428	0.9778672032193159	0.6278777731268314	48	0	0.6278777731268314	48	0	NA	NA	NA	0.5767844268204758	47	0	unmethylated (<10%)	P35500	Sodium channel protein para (Protein paralytic) (Sodium channel 1) (DmNav1)	male courtship behavior, veined wing generated song production [GO:0045433]; mechanosensory behavior [GO:0007638]; membrane depolarization during action potential [GO:0086010]; neuronal action potential [GO:0019228]; regulation of postsynaptic membrane potential [GO:0060078]; response to hypoxia [GO:0001666]; response to mechanical stimulus [GO:0009612]; sensory perception of pain [GO:0019233]; sensory perception of sound [GO:0007605]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN017669	Chromosome_3A	786	1	34	51.908396946564885	0.7007735675888291	1.5625	5	0	1.5625	5	0	NA	NA	NA	0.31857279388340237	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017670	Chromosome_3A	264	1	10	41.666666666666664	0.8753315649867374	1.5384615384615385	10	0	1.5384615384615385	10	0	NA	NA	NA	0.8398656215005599	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017671	Chromosome_3A	1037	2	11	37.12632594021215	0.30784800561342907	0.4830917874396135	11	0	0.37037037037037035	8	0	0.6944444444444444	3	0	2.7175671303785185	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017446	Chromosome_3A	237	1	14	62.447257383966246	0.6196078431372549	0.6756756756756757	9	0	0.6756756756756757	9	0	NA	NA	NA	0.7454739084132055	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017672	Chromosome_3A	2559	6	44	32.082844861273934	0.6696960685184083	1.8481317798312575	42	0	2.995169082125604	18	0	1.031636863823934	24	0	0.4830917874396135	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017673	Chromosome_3A	345	1	9	47.53623188405797	0.46288014311270126	87.27272727272727	9	1	87.27272727272727	9	1	NA	NA	NA	61.46682188591385	16	0.625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017674	Chromosome_3A	366	1	14	37.704918032786885	1.0782828282828283	80.22690437601297	14	1	80.22690437601297	14	1	NA	NA	NA	90.97938144329896	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003374	Chromosome_3A	639	1	3	39.436619718309856	0.12136752136752137	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017675	Chromosome_3A	7229	9	242	36.81007054917693	0.988635387515767	1.0869565217391304	14	0	1.8518518518518519	9	0	0	5	0	0	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017677	Chromosome_3A	5027	9	115	36.343743783568726	0.6927876883548921	1.0066541545811294	115	0	0.6094906399651719	44	0	1.2626262626262625	71	0	0.9232728430436167	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017683	Chromosome_3A	504	1	2	49.6031746031746	0.09278350515463918	83.78378378378379	2	1	83.78378378378379	2	1	NA	NA	NA	91.25964010282776	30	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017682	Chromosome_3A	44606	9	787	35.26431421781823	0.5676758706364965	88.01874503036763	783	0.9719029374201787	93.3253873659118	18	0.9444444444444444	87.94233739488588	765	0.9725490196078431	96.59663865546219	27	1	methylated (>=50%)	Q9MA55	Acyl-CoA-binding domain-containing protein 4 (Acyl-CoA binding protein 4)	lipid transport [GO:0006869]; response to ethylene [GO:0009723]; response to jasmonic acid [GO:0009753]; response to light stimulus [GO:0009416]	hit with GO BP
GN017681	Chromosome_3A	648	1	34	45.370370370370374	1.0195751770095793	0.6530612244897959	34	0	0.6530612244897959	34	0	NA	NA	NA	0.6446719757299962	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017680	Chromosome_3A	690	1	23	42.7536231884058	0.7347222222222223	0.3787878787878788	23	0	0.3787878787878788	23	0	NA	NA	NA	0.5405405405405406	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017679	Chromosome_3A	393	1	9	40.458015267175576	0.571590174531351	0.24330900243309003	9	0	0.24330900243309003	9	0	NA	NA	NA	11.76079734219269	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017685	Chromosome_3A	423	1	12	42.08037825059102	0.6411519514967791	0.8992805755395683	12	0	0.8992805755395683	12	0	NA	NA	NA	1.0976948408342482	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017684	Chromosome_3A	3800	3	82	38.21052631578947	0.5932672920470577	80.16250495441935	82	0.7926829268292683	76.57378740970073	20	0.65	81.01545253863135	62	0.8387096774193549	14.435279187817258	58	0.1206896551724138	methylated (>=50%)	Q9VQ93	Golgi phosphoprotein 3 homolog sauron (Protein rotini)	actomyosin contractile ring assembly [GO:0000915]; cleavage furrow formation [GO:0036089]; Golgi organization [GO:0007030]; Golgi to plasma membrane protein transport [GO:0043001]; Golgi vesicle budding [GO:0048194]; male meiosis cytokinesis [GO:0007112]; meiosis I cytokinesis [GO:0007110]; meiosis II cytokinesis [GO:0007111]; mitotic cytokinesis [GO:0000281]; mitotic spindle assembly [GO:0090307]; protein targeting to Golgi apparatus [GO:0140450]; retrograde transport, vesicle recycling within Golgi [GO:0000301]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; spindle assembly [GO:0051225]; spindle assembly involved in male meiosis [GO:0007053]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN017690	Chromosome_3A	302	1	4	36.75496688741722	0.39246263807667314	0.8264462809917356	4	0	0.8264462809917356	4	0	NA	NA	NA	80.73040380047506	49	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003192	Chromosome_3A	434	1	33	47.465437788018434	1.3753961394410832	0.26472534745201853	33	0	0.26472534745201853	33	0	NA	NA	NA	0.9620384815392615	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017689	Chromosome_3A	817	1	49	52.26438188494492	0.9757958367864281	1.3793103448275863	8	0	1.3793103448275863	8	0	NA	NA	NA	0.5356545028456645	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017691	Chromosome_3A	56174	34	820	35.495068893082205	0.465676973643772	89.31876943830329	796	0.9899497487437185	94.82243611018919	140	1	88.61831545155023	656	0.9878048780487805	84.55	60	1	methylated (>=50%)	Q9ULT8	E3 ubiquitin-protein ligase HECTD1 (EC 2.3.2.26) (E3 ligase for inhibin receptor) (EULIR) (HECT domain-containing protein 1)	aorta development [GO:0035904]; heart valve development [GO:0003170]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]; ventricular septum development [GO:0003281]	hit with GO BP
GN017702	Chromosome_3A	1508	4	18	32.294429708222815	0.4588235294117647	78.16764132553607	18	0.8888888888888888	93.4322033898305	8	1	71.41518275538894	10	0.8	92.19977553310886	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017701	Chromosome_3A	11284	5	209	35.08507621410847	0.6029112279483609	87.56998175756432	209	0.9952153110047847	84.94423791821562	16	1	87.76060994534782	193	0.9948186528497409	82.91090629800307	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017700	Chromosome_3A	30780	11	432	34.89278752436647	0.4649966486359422	76.82887716126776	432	0.9143518518518519	63.250366032210835	12	0.6666666666666666	77.10477777116678	420	0.9214285714285714	30.408472012102873	44	0.25	methylated (>=50%)	A3KP37	Arginine-hydroxylase NDUFAF5, mitochondrial (EC 1.-.-.-) (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5) (Putative methyltransferase NDUFAF5) (EC 2.1.1.-)	mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN017699	Chromosome_3A	1909	3	32	44.26401257202724	0.34401045186286433	6.310013717421125	30	0	6.7085953878406706	21	0	5.555555555555555	9	0	0.9276437847866419	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017698	Chromosome_3A	957	1	26	44.5141065830721	0.5501824212271973	0.6329113924050633	26	0	0.6329113924050633	26	0	NA	NA	NA	1.3406940063091484	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017697	Chromosome_3A	222	1	10	41.891891891891895	1.1746031746031746	0.9689922480620154	10	0	0.9689922480620154	10	0	NA	NA	NA	0.8496176720475785	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017696	Chromosome_3A	258	1	4	46.12403100775194	0.31272727272727274	1.5706806282722514	4	0	1.5706806282722514	4	0	NA	NA	NA	27.93505412156536	27	0.07407407407407407	NA	NA	NA	NA	no Swiss-Prot hit
GN017695	Chromosome_3A	301	2	5	31.893687707641195	0.6635802469135802	16.141732283464567	5	0.2	17.2972972972973	4	0.25	13.043478260869565	1	0	10.870437224227837	34	0.11764705882352941	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017694	Chromosome_3A	360	1	10	49.72222222222222	0.450112528132033	96.42857142857143	10	1	96.42857142857143	10	1	NA	NA	NA	94.95453212085656	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017693	Chromosome_3A	411	1	8	47.201946472019465	0.3496012759170654	92.71844660194175	8	1	92.71844660194175	8	1	NA	NA	NA	95.01375515818432	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017692	Chromosome_3A	357	1	5	40.896358543417364	0.34593023255813954	73.23651452282158	5	1	73.23651452282158	5	1	NA	NA	NA	87.57624398073837	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011188	Chromosome_3A	2793	6	17	32.83208020050125	0.2292195691844242	32.82864695986542	14	0.07142857142857142	33.4375	5	0	32.55813953488372	9	0.1111111111111111	15.10462074978204	38	0.02631578947368421	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017704	Chromosome_3A	777	1	35	46.46074646074646	0.8361517648505719	72.1729490022173	35	0.9714285714285714	72.1729490022173	35	0.9714285714285714	NA	NA	NA	78.04459691252144	42	0.8809523809523809	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017705	Chromosome_3A	2764	4	11	33.35745296671491	0.14450226943276062	57.69547325102881	11	0.7272727272727273	68.70748299319727	3	1	56.17977528089887	8	0.625	34.201151000274045	16	0.4375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011489	Chromosome_3A	1891	5	13	32.73400317292438	0.2586758423301134	66.16666666666667	7	1	66.02209944751381	4	1	66.38655462184875	3	1	21.73913043478261	42	0.21428571428571427	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017709	Chromosome_3A	717	1	25	42.53835425383542	0.7709677419354839	0.466977985323549	25	0	0.466977985323549	25	0	NA	NA	NA	0.6858122588941278	43	0	unmethylated (<10%)	Q40251	Violaxanthin de-epoxidase, chloroplastic (EC 1.23.5.1)	xanthophyll cycle [GO:0010028]	hit with GO BP
GN017710	Chromosome_3A	2775	6	29	36.108108108108105	0.3219296175248123	29.315726290516206	26	0.038461538461538464	25.970337645945094	21	0.047619047619047616	39.95983935742972	5	0	2.9860031104199067	78	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017711	Chromosome_3A	2357	4	36	32.41408570216377	0.588943258719417	67.71604938271605	36	0.8333333333333334	68.48196051735874	33	0.8181818181818182	60.264900662251655	3	1	74.81737012987013	67	0.9104477611940298	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017712	Chromosome_3A	168	1	3	52.976190476190474	0.2727272727272727	83.72093023255815	3	1	83.72093023255815	3	1	NA	NA	NA	57.77777777777778	29	0.6896551724137931	NA	NA	NA	NA	no Swiss-Prot hit
GN017715	Chromosome_3A	5883	5	62	35.917049124596296	0.32771428571428574	78.38120104438643	61	0.8852459016393442	82.6158940397351	9	1	77.58834469931804	52	0.8653846153846154	83.87799564270152	29	1	methylated (>=50%)	E7F594	G protein-coupled receptor 137Ba	bone remodeling [GO:0046849]; negative regulation of bone resorption [GO:0045779]; negative regulation of osteoclast differentiation [GO:0045671]; positive regulation of protein localization to lysosome [GO:0150032]; positive regulation of TORC1 signaling [GO:1904263]; regulation of autophagy [GO:0010506]; regulation of GTPase activity [GO:0043087]; regulation of lysosome size [GO:0062196]	hit with GO BP
GN017716	Chromosome_3A	39860	22	513	36.52032112393377	0.38688770989580346	85.27134359110697	501	0.9401197604790419	86.45310690852952	47	0.9574468085106383	85.16	454	0.9383259911894273	79.91967871485944	58	0.9482758620689655	methylated (>=50%)	Q5ZKA2	Isoleucine--tRNA ligase, mitochondrial (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)	isoleucyl-tRNA aminoacylation [GO:0006428]; mitochondrial translation [GO:0032543]	hit with GO BP
GN017717	Chromosome_3A	14880	7	178	35.69220430107527	0.3756750730602234	83.28499868178223	171	0.9824561403508771	81.92419825072886	8	1	83.32729249728162	163	0.9815950920245399	93.5929648241206	35	1	methylated (>=50%)	Q9CXE6	DNA repair protein XRCC3 (X-ray repair cross-complementing protein 3)	DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; interstrand cross-link repair [GO:0036297]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; regulation of centrosome duplication [GO:0010824]; replication fork processing [GO:0031297]; resolution of mitotic recombination intermediates [GO:0071140]; t-circle formation [GO:0090656]; telomere maintenance via recombination [GO:0000722]; telomere maintenance via telomere trimming [GO:0090737]	hit with GO BP
GN017718	Chromosome_3A	333	1	15	42.64264264264264	1.0006009615384615	100	1	1	100	1	1	NA	NA	NA	84.65387823185988	44	0.9772727272727273	NA	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN017721	Chromosome_3A	993	1	49	42.497482376636455	1.09489198919892	13.626373626373626	49	0	13.626373626373626	49	0	NA	NA	NA	1.4006514657980456	69	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017722	Chromosome_3A	20539	13	282	35.921904669165976	0.42812887511464576	80.17479300827966	253	0.9090909090909091	79.77632805219012	18	0.8888888888888888	80.21050872942945	235	0.9106382978723404	71.15768463073853	22	0.8636363636363636	methylated (>=50%)	Q96LQ0	Protein phosphatase 1 regulatory subunit 36	NA	hit, no GO BP
GN017723	Chromosome_3A	17225	10	200	34.76923076923077	0.39104099539854287	89.39687267311989	198	0.98989898989899	88.90339425587467	16	1	89.42672141503475	182	0.989010989010989	30.453563714902806	29	0.3103448275862069	methylated (>=50%)	P17439	Lysosomal acid glucosylceramidase (Lysosomal acid GCase) (EC 3.2.1.45) (Acid beta-glucosidase) (Beta-glucocerebrosidase) (Cholesterol glucosyltransferase) (SGTase) (EC 2.4.1.-) (Cholesteryl-beta-glucosidase) (EC 3.2.1.-) (D-glucosyl-N-acylsphingosine glucohydrolase) (Lysosomal cholesterol glycosyltransferase) (Lysosomal galactosylceramidase) (EC 3.2.1.46) (Lysosomal glycosylceramidase)	antigen processing and presentation [GO:0019882]; autophagosome organization [GO:1905037]; autophagy [GO:0006914]; beta-glucoside catabolic process [GO:1901805]; brain morphogenesis [GO:0048854]; cell maturation [GO:0048469]; cellular response to starvation [GO:0009267]; cellular response to tumor necrosis factor [GO:0071356]; central nervous system development [GO:0007417]; ceramide biosynthetic process [GO:0046513]; cerebellar Purkinje cell layer formation [GO:0021694]; cholesterol metabolic process [GO:0008203]; determination of adult lifespan [GO:0008340]; establishment of skin barrier [GO:0061436]; glucosylceramide catabolic process [GO:0006680]; glucosylceramide metabolic process [GO:0006678]; glycolipid biosynthetic process [GO:0009247]; hematopoietic stem cell proliferation [GO:0071425]; homeostasis of number of cells [GO:0048872]; lipid storage [GO:0019915]; lymphocyte migration [GO:0072676]; lysosomal protein catabolic process [GO:1905146]; lysosome organization [GO:0007040]; microglia differentiation [GO:0014004]; microglial cell proliferation [GO:0061518]; mitochondrion organization [GO:0007005]; mitophagy [GO:0000423]; motor behavior [GO:0061744]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of protein metabolic process [GO:0051248]; negative regulation of protein-containing complex assembly [GO:0031333]; nervous system process [GO:0050877]; neuromuscular process [GO:0050905]; neuron apoptotic process [GO:0051402]; positive regulation of neuronal action potential [GO:1904457]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of type 2 mitophagy [GO:1905091]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; pyramidal neuron differentiation [GO:0021859]; regulation of membrane potential [GO:0042391]; regulation of protein metabolic process [GO:0051246]; regulation of TOR signaling [GO:0032006]; respiratory electron transport chain [GO:0022904]; response to dexamethasone [GO:0071548]; response to estrogen [GO:0043627]; response to pH [GO:0009268]; response to testosterone [GO:0033574]; response to thyroid hormone [GO:0097066]; skin epidermis development [GO:0098773]; sphingosine biosynthetic process [GO:0046512]; T cell differentiation in thymus [GO:0033077]; termination of signal transduction [GO:0023021]	hit with GO BP
GN017724	Chromosome_3A	26133	7	358	34.65350323345961	0.4565456814613383	80.72622240561172	356	0.9353932584269663	77.35849056603773	13	0.8461538461538461	80.83258843059635	343	0.9387755102040817	77.42230347349178	16	0.875	methylated (>=50%)	Q8BUN9	Sodium/potassium/calcium exchanger 2 (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone Na-Ca+K exchanger) (Solute carrier family 24 member 2)	calcium ion import [GO:0070509]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cellular response to high light intensity [GO:0071486]; cone photoresponse recovery [GO:0036368]; intracellular calcium ion homeostasis [GO:0006874]; learning [GO:0007612]; long-term synaptic depression [GO:0060292]; long-term synaptic potentiation [GO:0060291]; memory [GO:0007613]; monoatomic ion transmembrane transport [GO:0034220]; phototransduction [GO:0007602]; potassium ion transmembrane transport [GO:0071805]; protein-containing complex assembly [GO:0065003]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN017725	Chromosome_3A	17972	9	222	34.397952370353885	0.41920869916701137	86.61617948899426	222	0.963963963963964	92.15686274509804	16	1	86.32128214685054	206	0.9611650485436893	86.69097538742024	19	1	methylated (>=50%)	Q96SY0	Integrator complex subunit 14 (von Willebrand factor A domain-containing protein 9)	regulation of transcription elongation by RNA polymerase II [GO:0034243]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]; snRNA processing [GO:0016180]	hit with GO BP
GN017726	Chromosome_3A	369	1	12	42.00542005420054	0.7569230769230769	0.7396449704142012	12	0	0.7396449704142012	12	0	NA	NA	NA	0.3022289384208538	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017727	Chromosome_3A	20816	8	364	36.59204458109147	0.5233028934131313	52.34923820819268	364	0.4835164835164835	83.87640449438203	34	0.9705882352941176	49.56310197597061	330	0.43333333333333335	0.7230657989877078	33	0	methylated (>=50%)	Q969U6	F-box/WD repeat-containing protein 5 (F-box and WD-40 domain-containing protein 5)	centrosome duplication [GO:0051298]; cilium assembly [GO:0060271]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic nuclear division [GO:0007088]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN017728	Chromosome_3A	14494	9	374	36.208086104595004	0.7873627028047699	0.8813490244026695	373	0	0.35046728971962615	37	0	0.9320756823128872	336	0	0.703037120359955	57	0	unmethylated (<10%)	Q5W8I7	Vesicular glutamate transporter 2.2 (Solute carrier family 17 member 6-A) (Vesicular glutamate transporter 2-B)	L-glutamate import [GO:0051938]; L-glutamate transmembrane transport [GO:0015813]; neurotransmitter loading into synaptic vesicle [GO:0098700]; phosphate ion homeostasis [GO:0055062]; phosphate ion transport [GO:0006817]; regulation of synapse structure or activity [GO:0050803]; sensory perception [GO:0007600]; sodium-dependent phosphate transport [GO:0044341]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN017729	Chromosome_3A	903	1	42	46.51162790697674	0.8600195015759995	0.5417118093174431	41	0	0.5417118093174431	41	0	NA	NA	NA	2.5022341376228776	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017730	Chromosome_3A	558	1	29	47.8494623655914	0.9095098920863309	0.47619047619047616	16	0	0.47619047619047616	16	0	NA	NA	NA	0.5107252298263534	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017731	Chromosome_3A	588	1	16	42.68707482993197	0.60431654676259	0	16	0	0	16	0	NA	NA	NA	0.43440486533449174	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017732	Chromosome_3A	11068	4	148	35.31803397181063	0.4295887490958795	87.58955141629009	147	0.9591836734693877	94.8051948051948	4	1	87.33599543639475	143	0.958041958041958	84.10810810810811	13	0.9230769230769231	methylated (>=50%)	Q8IR45	BLOC-1-related complex subunit 8 homolog	lysosome localization [GO:0032418]; organelle transport along microtubule [GO:0072384]	hit with GO BP
GN017733	Chromosome_3A	6967	10	62	36.342758719678486	0.2810906698544355	93.00873907615481	62	1	95.50982226379794	27	1	91.75644028103045	35	1	96.9152440850554	39	1	methylated (>=50%)	P19483	ATP synthase F(1) complex subunit alpha, mitochondrial (ATP synthase F1 subunit alpha)	proton motive force-driven ATP synthesis [GO:0015986]	hit with GO BP
GN017734	Chromosome_3A	390	1	14	38.46153846153846	1.0532407407407407	91.78082191780823	14	1	91.78082191780823	14	1	NA	NA	NA	91.08691640524081	80	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017735	Chromosome_3A	972	1	33	42.489711934156375	0.7570450790653764	35	26	0.11538461538461539	35	26	0.11538461538461539	NA	NA	NA	38.987237546315356	45	0.15555555555555556	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017736	Chromosome_3A	453	1	15	45.033112582781456	0.6546873494556316	4.235294117647059	15	0	4.235294117647059	15	0	NA	NA	NA	13.733410271206001	32	0.125	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018992	Chromosome_3A	489	1	17	41.717791411042946	0.8052891601278698	69.91869918699187	4	1	69.91869918699187	4	1	NA	NA	NA	88.735053492762745	35	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017744	Chromosome_3A	7202	3	150	36.00388780894196	0.6427212399647315	62.512021542604344	150	0.6933333333333334	91	4	1	61.665676371558725	146	0.684931506849315	90.94110115236876	48	1	methylated (>=50%)	Q13405	Large ribosomal subunit protein mL49 (39S ribosomal protein L49, mitochondrial) (L49mt) (MRP-L49) (Neighbor of FAU) (NOF) (Protein NOF1)	mitochondrial translation [GO:0032543]	hit with GO BP
GN017743	Chromosome_3A	711	1	10	39.943741209563996	0.3740530303030303	53.911205073995774	10	0.6	53.911205073995774	10	0.6	NA	NA	NA	48.883079847908746	59	0.5423728813559322	methylated (>=50%)	Q3U1V8	Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25)	positive regulation of apoptotic process [GO:0043065]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]	hit with GO BP
GN017742	Chromosome_3A	35231	12	395	31.372938605205643	0.4574276648538177	85.42600052708859	360	0.975	77.89613848202397	13	1	85.64509879891514	347	0.9740634005763689	75.96067917783735	17	0.8823529411764706	methylated (>=50%)	Q5ZK44	Cotranscriptional regulator ARB2A homolog (Cotranscriptional regulator FAM172A homolog) (Protein FAM172A)	regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN017741	Chromosome_3A	583	2	23	42.53859348198971	0.8748613557773863	0.12903225806451613	23	0	0.13245033112582782	22	0	0	1	0	1.0422698320787493	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017740	Chromosome_3A	6056	7	164	37.28533685601057	0.7792612120641497	0.47422937726194936	164	0	0.540765391014975	58	0	0.44571224817257976	106	0	0.7433318758198514	43	0	unmethylated (<10%)	Q7TPQ9	Arrestin domain-containing protein 3	fat pad development [GO:0060613]; negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071878]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of heat generation [GO:0031651]; negative regulation of locomotion involved in locomotory behavior [GO:0090327]; positive regulation of hippo signaling [GO:0035332]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; response to mechanical stimulus [GO:0009612]; skin development [GO:0043588]; temperature homeostasis [GO:0001659]	hit with GO BP
GN017739	Chromosome_3A	192	1	14	54.6875	1.0557737627651218	1.2048192771084338	14	0	1.2048192771084338	14	0	NA	NA	NA	0.7944389275074478	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017738	Chromosome_3A	5039	8	143	36.35641992458821	0.8601234243697479	0.5848787446504993	143	0	0.6402561024409764	56	0	0.5542008423852804	87	0	1.0456605088881143	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017757	Chromosome_3A	834	1	6	53.117505995203835	0.10256200040992007	47.41379310344828	6	0.6666666666666666	47.41379310344828	6	0.6666666666666666	NA	NA	NA	49.38927243759957	54	0.5185185185185185	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN003946	Chromosome_3A	722	3	5	34.07202216066482	0.2402022756005057	45.6140350877193	5	0.6	45.50898203592814	3	0.6666666666666666	45.90163934426229	2	0.5	45.848119233498934	38	0.5	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017756	Chromosome_3A	528	1	11	41.09848484848485	0.49573233185387505	90.38817005545286	11	1	90.38817005545286	11	1	NA	NA	NA	94.44290080577939	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017755	Chromosome_3A	450	1	33	45.77777777777778	1.4732142857142858	0.9375	17	0	0.9375	17	0	NA	NA	NA	0.4411116012351125	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017754	Chromosome_3A	333	1	9	43.24324324324324	0.5873015873015873	0.43478260869565216	9	0	0.43478260869565216	9	0	NA	NA	NA	0.6242568370986921	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017753	Chromosome_3A	23998	7	433	37.00725060421702	0.52700785323373045	89.14993282254258	430	0.9697674418604652	90.95163806552262	10	0.9	89.10699680273626	420	0.9714285714285714	71.65354330708661	20	0.6	methylated (>=50%)	Q2YDE4	Proteasome subunit alpha type-6	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN017752	Chromosome_3A	172	1	4	47.674418604651166	0.4132132132132132	91.24087591240875	4	1	91.24087591240875	4	1	NA	NA	NA	94.59211732355637	43	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017751	Chromosome_3A	209	1	5	45.933014354066984	0.4700854700854701	98.1981981981982	5	1	98.1981981981982	5	1	NA	NA	NA	95.39614561027837	29	1	methylated (>=50%)	Q91ZN5	Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (Solute carrier family 35 member B2)	3'-phosphoadenosine 5'-phosphosulfate transport [GO:0046963]; 5'-adenylyl sulfate transmembrane transport [GO:1902558]; chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; peptidyl-tyrosine sulfation [GO:0006478]	hit with GO BP
GN017750	Chromosome_3A	334	1	5	55.08982035928144	0.21045998739760555	72.72727272727273	1	1	72.72727272727273	1	1	NA	NA	NA	90.38882803943045	41	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017749	Chromosome_3A	23603	12	280	35.105706901665044	0.38507028474856936	85.62196199734865	279	0.9283154121863799	79.00302114803625	24	0.875	86.14421930870084	255	0.9333333333333333	60.64084170253467	45	0.5333333333333333	methylated (>=50%)	A5D6U8	Acid phosphatase type 7 (EC 3.1.3.2) (Purple acid phosphatase long form)	NA	hit, no GO BP
GN017748	Chromosome_3A	3431	4	99	34.4797435150102	0.971143234542346	0.4710530314541863	99	0	0.9052504526252263	27	0	0.3249390739236393	72	0	0.5819924683327627	55	0	unmethylated (<10%)	A0A0F7YYX3	Neuropeptide prohormone-4	NA	hit, no GO BP
GN019179	Chromosome_3A	590	2	4	34.91525423728814	0.2245694166904558	86.95652173913044	4	1	86.91099476439791	3	1	87.09677419354838	1	1	29.73568281938326	23	0.08695652173913043	NA	NA	NA	NA	no Swiss-Prot hit
GN019141	Chromosome_3A	772	3	7	33.54922279792746	0.32363157264343034	33.30058939096267	7	0	32.86026200873363	6	0	37.254901960784316	1	0	36.72571931147129	39	0.1282051282051282	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017767	Chromosome_3A	363	1	13	41.04683195592286	0.8505767844268205	84.14396887159533	13	1	84.14396887159533	13	1	NA	NA	NA	1.1641443538998837	23	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017768	Chromosome_3A	19544	8	346	36.37433483422022	0.5353370096884714	90.90221456486111	342	0.9590643274853801	60.079840319361274	12	0.5	91.56507554945055	330	0.9757575757575757	34.08723747980614	38	0.39473684210526316	methylated (>=50%)	P12261	Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)	NA	hit, no GO BP
GN017769	Chromosome_3A	25010	11	557	35.54178328668532	0.7057892310799228	0.7253849162607119	554	0	0.6592699790963177	148	0	0.7441563184806428	406	0	0.6211180124223602	15	0	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN011765	Chromosome_3A	478	1	25	41.63179916317991	1.2783483097988875	0.5741626794258373	25	0	0.5741626794258373	25	0	NA	NA	NA	5.650043240126838	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017771	Chromosome_3A	23099	9	437	35.55998095155635	0.6010633673629309	85.43518784055061	431	0.9303944315545244	70.89065894279507	27	0.7037037037037037	86.19272110126343	404	0.9455445544554455	82.28655544651619	29	0.8275862068965517	methylated (>=50%)	Q9D2C9	snRNA-activating protein complex subunit 3 (SNAPc subunit 3) (Small nuclear RNA-activating complex polypeptide 3)	snRNA transcription by RNA polymerase II [GO:0042795]; snRNA transcription by RNA polymerase III [GO:0042796]	hit with GO BP
GN017770	Chromosome_3A	22163	19	299	34.905021883319044	0.44302115381272705	87.54714791388615	299	0.9933110367892977	92.30958836578753	82	1	86.08075288403157	217	0.9907834101382489	51.282051282051285	10	0.5	methylated (>=50%)	A6NNM8	Tubulin polyglutamylase TTLL13 (EC 6.3.2.-) (Tubulin tyrosine ligase like 13) (Tubulin tyrosine ligase-like family member 13 pseudogene) (Tubulin--tyrosine ligase-like protein 13)	microtubule bundle formation [GO:0001578]; protein polyglutamylation [GO:0018095]	hit with GO BP
GN017774	Chromosome_3A	612	2	10	36.111111111111114	0.5035379298996215	0.635593220338983	10	0	0.6711409395973155	6	0	0.5747126436781609	4	0	1.16869918699187	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017773	Chromosome_3A	15348	22	259	36.773520979932236	0.4996770119628132	0.9103142563128315	259	0	0.45724737082761774	54	0	1.0051694428489375	205	0	1.810762560571283	49	0	unmethylated (<10%)	Q04164	Putative epidermal cell surface receptor (Stranded at second protein)	axon guidance [GO:0007411]; cell adhesion [GO:0007155]; cell-cell signaling via exosome [GO:0099156]; instar larval development [GO:0002168]; positive regulation of cell differentiation [GO:0045597]	hit with GO BP
GN017772	Chromosome_3A	4231	4	69	35.21626093122193	0.5267365640578737	0.4988185875557889	69	0	0.37593984962406013	11	0	0.5187671650900214	58	0	0.7916666666666666	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017775	Chromosome_3A	29571	39	413	34.80436914544655	0.4641471443401484	92.55865999930063	409	0.9926650366748166	95.39149888143177	121	1	91.69102868627809	288	0.9895833333333334	94.00369003690037	31	1	methylated (>=50%)	O14646	ATP-dependent chromatin remodeler CHD1 (EC 3.6.4.-) (Chromo domain-containing protein 1) (CHD-1)	chromatin remodeling [GO:0006338]; host-mediated activation of viral transcription [GO:0043923]; nucleosome organization [GO:0034728]	hit with GO BP
GN017776	Chromosome_3A	15418	9	224	35.0564275522117	0.4754381269871687	85.28656393619897	223	0.9955156950672646	87.57062146892656	17	1	85.14125512184602	206	0.9951456310679612	80.78994614003591	24	0.9583333333333334	methylated (>=50%)	Q6NWD4	Mitochondrial import inner membrane translocase subunit TIM50	apoptotic process [GO:0006915]; mitochondrial membrane organization [GO:0007006]; protein import into mitochondrial matrix [GO:0030150]	hit with GO BP
GN017777	Chromosome_3A	8003	3	126	38.260652255404224	0.4308208546793831	84.25484142576481	126	0.9285714285714286	87.33766233766234	5	1	84.11557641537108	121	0.9256198347107438	39.16884816753927	46	0.41304347826086957	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017780	Chromosome_3A	615	1	32	46.666666666666664	0.9655578451574919	0.4172461752433936	32	0	0.4172461752433936	32	0	NA	NA	NA	1.0035419126328218	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017781	Chromosome_3A	706	2	26	40.79320113314448	0.944238683127572	0	7	0	0	7	0	NA	NA	NA	0.554016620498615	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017783	Chromosome_3A	3266	3	72	34.90508266993264	0.7249476679481212	0.5718954248366013	72	0	0.5927180355630821	24	0	0.5620232838217584	48	0	0.5728314238952537	47	0	unmethylated (<10%)	Q5SPB6	Glutathione-specific gamma-glutamylcyclotransferase 1 (Gamma-GCG 1) (EC 4.3.2.7) (Cation transport regulator-like protein 1)	glutathione catabolic process [GO:0006751]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of protein processing [GO:0010955]; neurogenesis [GO:0022008]	hit with GO BP
GN017784	Chromosome_3A	354	1	0	46.32768361581921	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7318695941450433	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017785	Chromosome_3A	16350	20	263	35.235474006116206	0.5194145227578223	84.0331094049904	263	0.8973384030418251	82.3968821045794	51	0.8627450980392157	84.40373721768557	212	0.9056603773584906	83.10580204778157	43	0.813953488372093	methylated (>=50%)	Q86TV6	Tetratricopeptide repeat protein 7B (TPR repeat protein 7B) (Tetratricopeptide repeat protein 7-like-1) (TPR repeat protein 7-like-1)	phosphatidylinositol phosphate biosynthetic process [GO:0046854]; protein localization to plasma membrane [GO:0072659]	hit with GO BP
GN017786	Chromosome_3A	14457	12	139	35.719720550598325	0.3033192817385015	89.29859719438878	137	0.9854014598540146	93.72670807453416	29	1	88.08510638297872	108	0.9814814814814815	89.13542463657231	16	1	methylated (>=50%)	Q8CHK4	Histone acetyltransferase KAT5 (EC 2.3.1.48) (60 kDa Tat-interactive protein) (Tip60) (Histone acetyltransferase HTATIP) (Lysine acetyltransferase 5) (Protein 2-hydroxyisobutyryltransferase KAT5) (EC 2.3.1.-) (Protein acetyltransferase KAT5) (EC 2.3.1.-) (Protein crotonyltransferase KAT5) (EC 2.3.1.-) (Protein lactyltransferase KAT5) (EC 2.3.1.-)	aggrephagy [GO:0035973]; apoptotic process [GO:0006915]; attachment of mitotic spindle microtubules to kinetochore [GO:0051315]; cellular response to estradiol stimulus [GO:0071392]; cellular response to glucose starvation [GO:0042149]; cellular response to glucose stimulus [GO:0071333]; cGAS/STING signaling pathway [GO:0140896]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; DNA double-strand break processing [GO:0000729]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; double-strand break repair via homologous recombination [GO:0000724]; double-strand break repair via nonhomologous end joining [GO:0006303]; establishment of mitotic spindle orientation [GO:0000132]; lipid droplet disassembly [GO:1905691]; membraneless organelle assembly [GO:0140694]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; negative regulation of interleukin-2 production [GO:0032703]; negative regulation of myoblast differentiation [GO:0045662]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural tube development [GO:0021915]; neurogenesis [GO:0022008]; nucleotide-excision repair [GO:0006289]; peptidyl-lysine acetylation [GO:0018394]; phosphatidylcholine biosynthetic process [GO:0006656]; phosphatidylethanolamine biosynthetic process [GO:0006646]; positive regulation of aggrephagy [GO:1905337]; positive regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902425]; positive regulation of autophagy [GO:0010508]; positive regulation of circadian rhythm [GO:0042753]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of innate immune response [GO:0045089]; positive regulation of mitotic sister chromatid segregation [GO:0062033]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of protein acetylation [GO:1901985]; positive regulation of regulatory T cell differentiation [GO:0045591]; positive regulation of signal transduction by p53 class mediator [GO:1901798]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of triglyceride biosynthetic process [GO:0010867]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein acetylation [GO:0006473]; protein localization to site of double-strand break [GO:1990166]; protein targeting to vacuole involved in autophagy [GO:0071211]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of chromatin organization [GO:1902275]; regulation of double-strand break repair [GO:2000779]; regulation of hematopoietic stem cell differentiation [GO:1902036]; regulation of transcription by RNA polymerase II [GO:0006357]; response to ionizing radiation [GO:0010212]; sperm DNA condensation [GO:0035092]; spermatid development [GO:0007286]; triglyceride biosynthetic process [GO:0019432]	hit with GO BP
GN017787	Chromosome_3A	20857	7	179	40.255070240207125	0.24706559383081667	84.18424538877	145	0.9517241379310345	67.84922394678492	10	0.8	84.97116000854518	135	0.9629629629629629	43.53634577603143	31	0.4838709677419355	methylated (>=50%)	Q2T9S3	DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase III subunit C6) (DNA-directed RNA polymerase III subunit F)	positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; transcription by RNA polymerase III [GO:0006383]	hit with GO BP
GN017788	Chromosome_3A	12553	5	205	36.73225523779176	0.4843288301344184	82.06494165398276	200	0.915	92.26190476190476	23	1	81.11480865224625	177	0.903954802259887	89.74498100922409	29	0.9655172413793104	methylated (>=50%)	Q8N413	Methylated amino-acid transporter SLC25A45 (Solute carrier family 25 member 45)	carnitine biosynthetic process [GO:0045329]	hit with GO BP
GN017789	Chromosome_3A	36404	25	640	37.21294363256785	0.5096112943492033	88.84939635167288	572	0.951048951048951	94.75745051120296	84	0.9880952380952381	87.92705291041229	488	0.944672131147541	44.1983780411728	43	0.3488372093023256	methylated (>=50%)	Q4LE39	AT-rich interactive domain-containing protein 4B (ARID domain-containing protein 4B) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Breast cancer-associated antigen BRCAA1) (Histone deacetylase complex subunit SAP180) (Retinoblastoma-binding protein 1-like 1)	negative regulation of cell migration [GO:0030336]; negative regulation of stem cell population maintenance [GO:1902455]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of stem cell population maintenance [GO:1902459]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017790	Chromosome_3A	9557	13	134	34.74939834676154	0.47045888033668076	89.12542622799742	134	0.9776119402985075	95.32434709351305	27	1	87.3894066297039	107	0.9719626168224299	6.791569086651054	52	0.057692307692307696	methylated (>=50%)	P42696	RNA-binding protein 34 (RNA-binding motif protein 34)	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	hit with GO BP
GN017796	Chromosome_3A	3515	5	53	34.65149359886202	0.5027933714779229	78.75243664717348	53	0.8490566037735849	86.97850821744628	13	0.9230769230769231	76.42857142857143	40	0.825	38.412017167381975	40	0.475	methylated (>=50%)	P36404	ADP-ribosylation factor-like protein 2	bicellular tight junction assembly [GO:0070830]; centrosome cycle [GO:0007098]; maintenance of protein location in nucleus [GO:0051457]; negative regulation of GTPase activity [GO:0034260]; positive regulation of cell-substrate adhesion [GO:0010811]; positive regulation of microtubule polymerization [GO:0031116]; protein folding [GO:0006457]; regulation of aerobic respiration [GO:1903715]; regulation of glycolytic process [GO:0006110]; regulation of microtubule polymerization [GO:0031113]	hit with GO BP
GN017795	Chromosome_3A	2454	4	84	39.28280358598207	0.889867384997928	0.8517434122970455	84	0	0.9247027741083224	53	0	0.8024966562639322	31	0	0.6912442396313364	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017794	Chromosome_3A	17209	3	437	34.13911325469231	0.8719226666666666	0.7396061269146609	437	0	0.5208333333333334	26	0	0.7492005481955231	411	0	0.32505910165484636	69	0	unmethylated (<10%)	Q575S9	Cytoglobin-2 (Nitric oxygen dioxygenase CYGB) (EC 1.14.12.-) (Nitrite reductase CYGB) (EC 1.7.-.-) (Pseudoperoxidase CYGB) (EC 1.11.1.-) (Superoxide dismutase CYGB) (EC 1.15.1.1)	nitric oxide catabolic process [GO:0046210]; oxygen transport [GO:0015671]; removal of superoxide radicals [GO:0019430]	hit with GO BP
GN017793	Chromosome_3A	195	1	11	46.666666666666664	1.2413194444444444	0.6546644844517185	11	0	0.6546644844517185	11	0	NA	NA	NA	0.5372733378106112	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017799	Chromosome_3A	5858	2	153	35.50699897575964	0.8293005193572295	0.6364534181937891	153	0	0.5186385737439222	107	0	0.8834522595990486	46	0	0.2964426877470356	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004203	Chromosome_3A	282	1	5	41.13475177304964	0.45366795366795365	0	5	0	0	5	0	NA	NA	NA	0.8771929824561403	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017808	Chromosome_3A	1020	1	21	39.31372549019608	0.5356339084771192	1.3761467889908257	21	0	1.3761467889908257	21	0	NA	NA	NA	0.7648183556405354	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017807	Chromosome_3A	1008	1	19	40.17857142857143	0.4698032674287396	23.866666666666667	19	0.2631578947368421	23.866666666666667	19	0.2631578947368421	NA	NA	NA	0.8174386920980926	54	0	sparse (10-50%)	Q6QQT1	Zinc transporter ZIP1 (Solute carrier family 39 member 1) (Zrt- and Irt-like protein 1) (ZIP-1)	zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN017836	Chromosome_3A	2159	7	52	38.30477072718851	0.6566148087495614	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017806	Chromosome_3A	574	2	18	44.94773519163763	0.6262956901254774	6.133056133056133	18	0	5.834305717619603	17	0	8.571428571428571	1	0	1.7769607843137254	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017805	Chromosome_3A	942	1	33	42.038216560509554	0.7953841823810864	1.0769230769230769	33	0	1.0769230769230769	33	0	NA	NA	NA	1.473922902494331	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017817	Chromosome_3A	3419	8	92	36.3849078677976	0.81505378015821806	0.593952483801296	49	0	0.5327082889409759	19	0	0.6387287739523291	30	0	0.6829823562891292	21	0	unmethylated (<10%)	Q9VUX2	E3 ubiquitin-protein ligase mind-bomb (EC 2.3.2.27) (Mind bomb homolog) (D-mib) (Protein mind bob 1) (RING-type E3 ubiquitin transferase mind-bomb)	endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; lateral inhibition [GO:0046331]; Notch signaling pathway [GO:0007219]; positive regulation of endocytosis [GO:0045807]; positive regulation of Notch signaling pathway [GO:0045747]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]; sensory organ development [GO:0007423]	hit with GO BP
GN020210	Chromosome_3A	3365	4	84	37.56315007429421	0.7269781258439103	82.75942298743601	84	0.9047619047619048	82.33890214797135	49	0.8979591836734694	83.35201793721973	35	0.9142857142857143	2.0258863252673045	54	0	methylated (>=50%)	A0JN69	E3 ubiquitin-protein ligase MARCHF3 (EC 2.3.2.27) (Membrane-associated RING finger protein 3) (Membrane-associated RING-CH protein III) (MARCH-III) (RING-type E3 ubiquitin transferase MARCHF3)	protein ubiquitination [GO:0016567]	hit with GO BP
GN020209	Chromosome_3A	7256	4	139	35.363836824696804	0.6138848768041447	91.62497683898462	139	1	86.49093904448105	12	1	91.9308923137332	127	1	91.04258443465491	22	1	methylated (>=50%)	Q3T025	Large ribosomal subunit protein uL22 (60S ribosomal protein L17)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN017820	Chromosome_3A	597	1	23	41.70854271356784	0.8859852884243128	20.026178010471206	23	0	20.026178010471206	23	0	NA	NA	NA	12.965340179717586	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017819	Chromosome_3A	627	1	2	44.1786283891547	0.06826347305389222	3.7037037037037037	2	0	3.7037037037037037	2	0	NA	NA	NA	0.1863932898415657	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017818	Chromosome_3A	588	1	2	44.21768707482993	0.07225806451612904	0	2	0	0	2	0	NA	NA	NA	3.2	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017824	Chromosome_3A	672	1	28	43.45238095238095	0.883090064298118	0.4970178926441352	28	0	0.4970178926441352	28	0	NA	NA	NA	0.4782146652497343	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017823	Chromosome_3A	2319	1	99	46.05433376455369	0.8054484536986686	0.6305170239596469	91	0	0.6305170239596469	91	0	NA	NA	NA	1.3653741125068268	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017822	Chromosome_3A	42903	12	627	35.75041372398201	0.4588163266559235	61.81844297615628	611	0.6873977086743044	26.658322903629536	45	0.4	64.41859747632122	566	0.7102473498233216	1.1591148577449948	29	0	methylated (>=50%)	Q8TD10	Mirror-image polydactyly gene 1 protein	NA	hit, no GO BP
GN017821	Chromosome_3A	1266	1	50	48.1042654028436	0.6975975314084196	0.8138351983723296	48	0	0.8138351983723296	48	0	NA	NA	NA	0.5640612409347301	66	0	unmethylated (<10%)	Q91765	Forkhead box protein A2-A (FoxA2-A) (FoxA2a) (Fork head domain-related protein 3) (xFD-3) (Hepatocyte nuclear factor 3-beta homolog A) (HNF-3-beta-A) (HNF3-beta homolog A) (HNF3-beta-A) (xHNF3-beta-A) (xbeta-1)	anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; mesoderm formation [GO:0001707]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017834	Chromosome_3A	1989	3	63	40.0201106083459	0.7919044459190444	0.5522682445759369	63	0	0.6203473945409429	24	0	0.5205320994794679	39	0	6.109090909090909	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017833	Chromosome_3A	15919	3	391	36.53495822601922	0.741613090018301	0.689692922436915	372	0	1.2560386473429952	27	0	0.6556806313102007	345	0	5.686125852918878	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017832	Chromosome_3A	681	1	40	46.84287812041116	1.0887290167865706	0.5852842809364549	40	0	0.5852842809364549	40	0	NA	NA	NA	0.5543237250554324	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017831	Chromosome_3A	28811	10	369	34.90680642810038	0.4236505538325952	90.68294046398957	361	0.9916897506925207	92.84595300261097	43	0.9767441860465116	90.47107564830443	318	0.9937106918238994	92.65536723163842	6	1	methylated (>=50%)	Q9Y253	DNA polymerase eta (EC 2.7.7.7) (RAD30 homolog A) (Xeroderma pigmentosum variant type protein)	DNA repair [GO:0006281]; DNA synthesis involved in DNA repair [GO:0000731]; error-free translesion synthesis [GO:0070987]; regulation of DNA repair [GO:0006282]; response to UV-C [GO:0010225]; translesion synthesis [GO:0019985]	hit with GO BP
GN017830	Chromosome_3A	738	1	34	41.46341463414634	1.0764940580891502	0.5158437730287398	34	0	0.5158437730287398	34	0	NA	NA	NA	1.6660055533518445	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017829	Chromosome_3A	8793	7	289	36.93847378596611	0.96604811200359475	0.7225123399384792	289	0	0.896551724137931	51	0	0.7023705004389815	238	0	0.49480455220188024	49	0	unmethylated (<10%)	Q9CW42	Mitochondrial amidoxime-reducing component 1 (mARC1) (EC 1.7.-.-) (Molybdenum cofactor sulfurase C-terminal domain-containing protein 1) (MOSC domain-containing protein 1) (Moco sulfurase C-terminal domain-containing protein 1)	cellular detoxification of nitrogen compound [GO:0070458]; nitrate metabolic process [GO:0042126]; nitric oxide biosynthetic process [GO:0006809]	hit with GO BP
GN017828	Chromosome_3A	3758	7	87	36.85470995210218	0.6873667612740461	87.88390145123186	87	0.9310344827586207	76.74571805006588	29	0.8620689655172413	91.71960072595282	58	0.9655172413793104	1.10062893081761	60	0	methylated (>=50%)	Q6IQ97	RNA-binding protein 4.1 (RNA-binding motif protein 4.1)	circadian rhythm [GO:0007623]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN017827	Chromosome_3A	27384	21	444	35.064271107215895	0.5282602031133669	86.20902906617192	419	0.9331742243436754	85.97506678539627	43	0.9069767441860465	86.22984589787268	376	0.9361702127659575	3.5343035343035343	58	0	methylated (>=50%)	Q642T7	U3 small nucleolar RNA-associated protein 25 homolog (Digestive organ expansion factor homolog) (UTP25 small subunit processor component)	embryonic organ development [GO:0048568]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; protein catabolic process [GO:0030163]; protein destabilization [GO:0031648]; protein localization to nucleolus [GO:1902570]	hit with GO BP
GN017826	Chromosome_3A	1834	2	48	39.25845147219193	0.6813622291021671	68.92168921689218	45	0.9111111111111111	63.765822784810126	39	0.8974358974358975	86.92449355432781	6	1	84.52655889145497	9	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017825	Chromosome_3A	2922	3	34	39.322381930184804	0.30326007326007326	61.76470588235294	9	0.6666666666666666	65.40880503144655	8	0.75	9.090909090909092	1	0	87.98198705319449	53	1	methylated (>=50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN017839	Chromosome_3A	9667	8	253	37.6021516499431	0.7404043394654499	0.6338742393509128	253	0	0.56	30	0	0.6426006426006426	223	0	0.8573008849557522	75	0	unmethylated (<10%)	Q20930	Metalloprotease mig-17 (EC 3.4.24.-) (Abnormal cell migration protein 17)	gonad morphogenesis [GO:0035262]; intracellular protein localization [GO:0008104]; protein autoprocessing [GO:0016540]; regulation of cell migration [GO:0030334]; regulation of distal tip cell migration [GO:1903354]; zymogen activation [GO:0031638]	hit with GO BP
GN017838	Chromosome_3A	987	3	34	40.121580547112465	0.8676923076923077	1.5288788221970555	34	0	1.8356643356643356	23	0	0.9646302250803859	11	0	0.8192244675040962	79	0	unmethylated (<10%)	Q9CRB6	Tubulin polymerization-promoting protein family member 3	decidualization [GO:0046697]; embryo implantation [GO:0007566]; microtubule bundle formation [GO:0001578]; microtubule polymerization [GO:0046785]; positive regulation of protein polymerization [GO:0032273]	hit with GO BP
GN017837	Chromosome_3A	6251	5	88	35.97824348104303	0.4351294184278679	60.147883732789396	79	0.5316455696202531	52.94117647058823	9	0.5555555555555556	61.26656848306333	70	0.5285714285714286	59.2964824120603	48	0.7083333333333334	methylated (>=50%)	Q6INV3	Leucine-rich repeat-containing protein 57	NA	hit, no GO BP
GN017840	Chromosome_3A	30883	15	379	35.31716478321407	0.39428640860816627	83.3669022594939	371	0.9595687331536388	81.65680473372781	30	0.8666666666666667	83.46777321026914	341	0.967741935483871	0.8227508495796816	64	0	methylated (>=50%)	Q9R013	Cathepsin F (EC 3.4.22.41)	immune system process [GO:0002376]; proteolysis [GO:0006508]	hit with GO BP
GN017841	Chromosome_3A	393	1	24	46.0559796437659	1.1558823529411764	0.37453183520599254	24	0	0.37453183520599254	24	0	NA	NA	NA	0.8077901958614584	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017842	Chromosome_3A	2640	2	62	44.20454545454545	0.4845183825705997	0.4521328877530961	62	0	0.5970149253731343	43	0	0.07132667617689016	19	0	0.5605381165919282	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017843	Chromosome_3A	2799	5	51	34.6552340121472	0.6068847357322631	0.5078336034575905	50	0	0.33475349969567864	22	0	0.603116099849221	28	0	0.6530612244897959	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017844	Chromosome_3A	25141	17	329	36.69305119128117	0.38978048440965524	92.30557845561968	328	0.9969512195121951	94.27580225498698	122	1	91.3917940466613	206	0.9951456310679612	7.006523314810341	34	0.11764705882352941	methylated (>=50%)	Q9H2Y7	Zinc finger protein 106 (Zfp-106) (Zinc finger protein 474)	NA	hit, no GO BP
GN017845	Chromosome_3A	27473	15	326	34.69588323080843	0.39530063436051405	87.91517629024017	302	0.9668874172185431	85.19553072625699	20	0.95	88.07309688581314	282	0.9680851063829787	1.357677902621723	49	0	methylated (>=50%)	P49355	Protein farnesyltransferase subunit beta (FTase-beta) (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (Ras proteins prenyltransferase subunit beta)	protein farnesylation [GO:0018343]	hit with GO BP
GN017846	Chromosome_3A	13641	5	208	34.938787478923835	0.5009364327420954	88.45948471499132	207	0.9178743961352657	68.8195991091314	10	0.7	89.0662629876832	197	0.9289340101522843	60.633116883116884	57	0.6140350877192983	methylated (>=50%)	P52162	Protein max (Myc-associated factor X)	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN002833	Chromosome_3A	6063	8	42	33.481774698993895	0.25050367129152334	51.97215777262181	30	0.5333333333333333	51.24223602484472	14	0.35714285714285715	52.407407407407405	16	0.6875	0.688622754491018	59	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017847	Chromosome_3A	892	2	26	40.24663677130045	0.7227624033906757	0.8823529411764706	26	0	1.1173184357541899	20	0	0.32894736842105265	6	0	0.5782918149466192	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017848	Chromosome_3A	405	1	12	47.65432098765432	0.5270006506180872	0.5347593582887701	12	0	0.5347593582887701	12	0	NA	NA	NA	1.1608623548922057	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017849	Chromosome_3A	429	1	9	48.95104895104895	0.3575	0	9	0	0	9	0	NA	NA	NA	0.34782608695652173	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017850	Chromosome_3A	3945	4	58	36.88212927756654	0.4329422894985809	85.5020261143629	58	1	86.03945371775417	12	1	85.40840602696272	46	1	73.1711525189786	90	0.7444444444444445	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011431	Chromosome_3A	315	1	11	43.492063492063494	0.7388059701492538	56.64596273291925	11	0.6363636363636364	56.64596273291925	11	0.6363636363636364	NA	NA	NA	85.50799381124291	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017851	Chromosome_3A	16510	12	268	35.136281041792856	0.5270067306902084	85.16193166954429	267	0.9737827715355806	88.03030303030303	23	1	84.94913730118586	244	0.9713114754098361	4.373876572798083	50	0	methylated (>=50%)	O34371	Putative oxidoreductase YteT (EC 1.-.-.-)	NA	hit, no GO BP
GN017858	Chromosome_3A	279	1	14	46.236559139784944	0.9402985074626866	0.6060606060606061	14	0	0.6060606060606061	14	0	NA	NA	NA	0.4598514326140785	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017857	Chromosome_3A	765	1	9	39.21568627450981	0.3062177548478918	86.05200945626477	9	1	86.05200945626477	9	1	NA	NA	NA	45.98540145985402	31	0.41935483870967744	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017853	Chromosome_3A	7884	9	122	34.081684424150176	0.5332135907798233	77.58430681066784	122	0.819672131147541	66.08328304164152	34	0.47058823529411764	80.15370095726034	88	0.9545454545454546	0.7516339869281046	58	0	methylated (>=50%)	Q9WTY1	Programmed cell death protein 7 (ES18)	positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of T cell apoptotic process [GO:0070234]; response to glucocorticoid [GO:0051384]; RNA splicing [GO:0008380]	hit with GO BP
GN017855	Chromosome_3A	4245	6	94	34.44051825677268	0.7468555813431159	0.587282300526529	94	0	0.6825938566552902	39	0	0.5195704883962591	55	0	1.4033264033264032	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017859	Chromosome_3A	14958	18	347	35.28546597138655	0.7457131478407989	0.8919031913411065	345	0	0.5648121999435188	73	0	0.956299343934171	272	0	1.1150047785919082	50	0	unmethylated (<10%)	Q68BL7	Olfactomedin-like protein 2A (Photomedin-1)	signal transduction [GO:0007165]	hit with GO BP
GN017864	Chromosome_3A	2187	1	33	41.838134430727024	0.3455042463353217	90.49865229110512	33	0.9696969696969697	90.49865229110512	33	0.9696969696969697	NA	NA	NA	82.50701590271282	16	0.9375	methylated (>=50%)	Q8C1A3	Methionine synthase reductase (MSR) (EC 1.16.1.8) (Aquacobalamin reductase) (AqCbl reductase)	cobalamin metabolic process [GO:0009235]; folic acid metabolic process [GO:0046655]; homocysteine metabolic process [GO:0050667]; L-homocysteine catabolic process [GO:0043418]; L-methionine biosynthetic process [GO:0071265]; L-methionine cycle [GO:0033353]; protein stabilization [GO:0050821]	hit with GO BP
GN017863	Chromosome_3A	9490	8	122	35.50052687038988	0.40931058010825105	82.73527420446852	122	0.8852459016393442	90.26402640264027	13	1	82.18265503875969	109	0.8715596330275229	58.545092177379175	28	0.6071428571428571	methylated (>=50%)	Q5RD94	Mediator of RNA polymerase II transcription subunit 6 (Mediator complex subunit 6)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017862	Chromosome_3A	663	1	23	40.874811463046754	0.8310987573577502	0.830367734282325	23	0	0.830367734282325	23	0	NA	NA	NA	0.6687472135532768	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017861	Chromosome_3A	832	1	11	37.74038461538461	0.3718360216145939	0.945179584120983	11	0	0.945179584120983	11	0	NA	NA	NA	0.3416300634455832	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017860	Chromosome_3A	6881	3	185	33.934021217846244	0.9339239206191996	3.0988560696602354	179	0	1.4097744360902256	29	0	3.267605633802817	150	0	0.687757909215956	56	0	unmethylated (<10%)	Q90694	Cell division control protein 42 homolog (EC 3.6.5.2) (G25K GTP-binding protein)	actin cytoskeleton organization [GO:0030036]; actin filament organization [GO:0007015]; cardiac neural crest cell migration involved in outflow tract morphogenesis [GO:0003253]; cell junction assembly [GO:0034329]; dendritic spine morphogenesis [GO:0060997]; embryonic heart tube development [GO:0035050]; endocytosis [GO:0006897]; endothelin receptor signaling pathway [GO:0086100]; establishment of cell polarity [GO:0030010]; establishment of epithelial cell apical/basal polarity [GO:0045198]; filopodium assembly [GO:0046847]; heart process [GO:0003015]; host-mediated perturbation of viral process [GO:0044788]; integrin-mediated signaling pathway [GO:0007229]; maintenance of protein location [GO:0045185]; negative regulation of protein-containing complex assembly [GO:0031333]; neuropilin signaling pathway [GO:0038189]; phagocytosis, engulfment [GO:0006911]; positive regulation of cell growth [GO:0030307]; positive regulation of cell migration [GO:0030335]; positive regulation of cytokinesis [GO:0032467]; positive regulation of epithelial cell proliferation involved in lung morphogenesis [GO:0060501]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of pinocytosis [GO:0048549]; positive regulation of protein kinase activity [GO:0045860]; positive regulation of pseudopodium assembly [GO:0031274]; positive regulation of stress fiber assembly [GO:0051496]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; regulation of attachment of spindle microtubules to kinetochore [GO:0051988]; regulation of filopodium assembly [GO:0051489]; regulation of postsynapse organization [GO:0099175]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017865	Chromosome_3A	651	1	15	47.31182795698925	0.4119036571476779	2.1937842778793417	15	0	2.1937842778793417	15	0	NA	NA	NA	1.3059701492537314	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017866	Chromosome_3A	681	2	4	34.50807635829662	0.1973341060562156	0	4	0	0	4	0	NA	NA	NA	1.071080817916261	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017867	Chromosome_3A	5271	3	155	36.805160311136405	0.8721194614882088	0.49091801669121254	154	0	0.3806416530723219	41	0	0.5152168703570573	113	0	0.7139214686384497	33	0	unmethylated (<10%)	Q5F4B8	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 (Solute carrier family 46 member 3)	vacuolar transmembrane transport [GO:0034486]	hit with GO BP
GN017868	Chromosome_3A	5140	3	152	37.217898832684824	0.8581062528144804	0.567757358434185	152	0	0.5847953216374269	35	0	0.5643644181671593	117	0	0.5067567567567568	35	0	unmethylated (<10%)	Q5RBM3	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 (Solute carrier family 46 member 3)	cellular response to 2,3,7,8-tetrachlorodibenzodioxine [GO:1904613]; vacuolar transmembrane transport [GO:0034486]	hit with GO BP
GN017869	Chromosome_3A	841	2	25	52.318668252080855	0.44379010469436003	1.0909090909090908	20	0	1.0909090909090908	20	0	NA	NA	NA	0.4845322400298174	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017870	Chromosome_3A	519	1	27	53.75722543352601	0.7227666597895606	0.4048582995951417	21	0	0.4048582995951417	21	0	NA	NA	NA	0.4603303547251557	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017877	Chromosome_3A	2318	3	70	38.56773080241587	0.8189655172413793	0.6188925081433225	70	0	0.7638888888888888	41	0	0.49079754601226994	29	0	0.6048387096774194	69	0	unmethylated (<10%)	Q5F4B8	Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 (Solute carrier family 46 member 3)	vacuolar transmembrane transport [GO:0034486]	hit with GO BP
GN017876	Chromosome_3A	17448	21	466	35.47111416781293	0.8504165496974978	0.7288756983240223	464	0	0.629549478654338	96	0	0.7571933366986371	368	0	3.2944120100083403	48	0	unmethylated (<10%)	Q6PCN7	DNA-dependent ATPase/E3 ubiquitin-protein ligase HLTF (EC 2.3.2.27) (EC 3.6.4.-) (Helicase-like transcription factor) (HLTF) (P113) (RING-type E3 ubiquitin transferase HLTF) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; DNA damage response [GO:0006974]; mRNA transcription by RNA polymerase II [GO:0042789]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein K63-linked ubiquitination [GO:0070534]; protein localization to chromatin [GO:0071168]; protein polyubiquitination [GO:0000209]; regulation of neurogenesis [GO:0050767]; replication fork reversal [GO:0071932]	hit with GO BP
GN017875	Chromosome_3A	55189	27	789	35.7317581402091	0.44955916605065477	79.35077538571231	775	0.896774193548387	83.55595132086673	69	0.9855072463768116	79.05012520690973	706	0.8881019830028328	79.76408379092943	48	1	methylated (>=50%)	Q14527	DNA-dependent ATPase/E3 ubiquitin-protein ligase HLTF (EC 2.3.2.27) (EC 3.6.4.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (Helicase-like transcription factor) (HLTF) (RING finger protein 80) (RING-type E3 ubiquitin transferase HLTF) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (SMARCA3) (Sucrose nonfermenting protein 2-like 3)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; DNA damage response [GO:0006974]; mRNA transcription by RNA polymerase II [GO:0042789]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein K63-linked ubiquitination [GO:0070534]; protein localization to chromatin [GO:0071168]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of neurogenesis [GO:0050767]; replication fork reversal [GO:0071932]	hit with GO BP
GN017874	Chromosome_3A	357	1	6	42.857142857142854	0.36615384615384616	85.61151079136691	6	1	85.61151079136691	6	1	NA	NA	NA	88.73548791967367	44	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017880	Chromosome_3A	1182	1	49	42.30118443316413	0.9292005583096693	0.38095238095238093	49	0	0.38095238095238093	49	0	NA	NA	NA	0.7512850929221035	54	0	unmethylated (<10%)	Q17296	Rhodopsin	phototransduction [GO:0007602]; visual perception [GO:0007601]	hit with GO BP
GN017879	Chromosome_3A	2563	4	90	40.694498634412795	0.8486567625438732	1.6551309058080048	90	0	1.6315431679129844	47	0	1.673866090712743	43	0	0.42533081285444235	37	0	unmethylated (<10%)	P23050	p55-v-Fos-transforming protein	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017881	Chromosome_3A	3167	3	93	38.20650457846543	0.8091510989010989	1.9607843137254901	91	0	1.3824884792626728	26	0	2.2487379531895364	65	0	34.51282051282051	31	0.41935483870967744	unmethylated (<10%)	P19073	Cell division control protein 42 (EC 3.6.5.2) (Suppressor of RHO3 protein 2)	actin filament organization [GO:0007015]; budding cell apical bud growth [GO:0007118]; budding cell isotropic bud growth [GO:0007119]; conjugation with cellular fusion [GO:0000747]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; invasive growth in response to glucose limitation [GO:0001403]; nuclear membrane organization [GO:0071763]; positive regulation of exocytosis [GO:0045921]; positive regulation of pseudohyphal growth [GO:2000222]; regulation of cell morphogenesis [GO:0022604]; regulation of exit from mitosis [GO:0007096]; regulation of exocyst localization [GO:0060178]; regulation of vacuole fusion, non-autophagic [GO:0032889]; Rho protein signal transduction [GO:0007266]; septin ring organization [GO:0031106]	hit with GO BP
GN017890	Chromosome_3A	11652	3	334	36.04531410916581	0.8895406683975496	1.1979913916786227	331	0	0.9510869565217391	36	0	1.2271414821944178	295	0	28.04232804232804	27	0.07407407407407407	unmethylated (<10%)	Q9HF56	Cell division control protein 42 (EC 3.6.5.2)	actin filament organization [GO:0007015]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017889	Chromosome_3A	11056	9	110	33.21273516642547	0.3620351318396586	75.73822825219473	110	0.8636363636363636	83.3230006199628	28	1	74.02905839620006	82	0.8170731707317073	77.34553775743707	34	0.9705882352941176	methylated (>=50%)	Q4R6I5	Clathrin heavy chain linker domain-containing protein 1	NA	hit, no GO BP
GN017888	Chromosome_3A	9028	9	87	33.56225077536553	0.3433365855705578	86.56600249066003	86	0.9069767441860465	94.81481481481481	17	1	85.5974952165594	69	0.8840579710144928	25.075790385448247	29	0.2413793103448276	methylated (>=50%)	Q3T030	26S proteasome regulatory subunit 6B (26S proteasome AAA-ATPase subunit RPT3) (Proteasome 26S subunit ATPase 4)	NA	hit, no GO BP
GN017887	Chromosome_3A	8920	12	262	37.02914798206278	0.8569337477247827	13.596348223019238	258	0	12.120282295182571	86	0	14.13031413031413	172	0	11.779344670261302	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017886	Chromosome_3A	240	1	12	46.25	0.935064935064935	1.7543859649122806	11	0	1.7543859649122806	11	0	NA	NA	NA	0.948509485094851	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017885	Chromosome_3A	258	1	4	46.51162790697674	0.2918552036199095	76.04166666666667	4	1	76.04166666666667	4	1	NA	NA	NA	9.808853118712273	40	0.1	NA	NA	NA	NA	no Swiss-Prot hit
GN000923	Chromosome_3A	274	1	6	39.416058394160586	0.5637860082304527	1.3054830287206267	6	0	1.3054830287206267	6	0	NA	NA	NA	0.7202016564638098	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017884	Chromosome_3A	264	1	7	44.31818181818182	0.5546218487394958	1.2096774193548387	7	0	1.2096774193548387	7	0	NA	NA	NA	0.5277044854881267	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017897	Chromosome_3A	7227	5	75	35.76864535768645	0.33680792891319206	80.61908517350157	75	0.8933333333333333	60.06944444444444	6	0.6666666666666666	81.8561872909699	69	0.9130434782608695	2.33781414377557	40	0	methylated (>=50%)	Q9QZ05	eIF-2-alpha kinase GCN2 (Eukaryotic translation initiation factor 2-alpha kinase 4) (EC 2.7.11.1) (GCN2-like protein) (mGCN2)	cellular response to amino acid starvation [GO:0034198]; cellular response to cold [GO:0070417]; cellular response to starvation [GO:0009267]; cellular response to UV [GO:0034644]; DNA damage checkpoint signaling [GO:0000077]; endoplasmic reticulum unfolded protein response [GO:0030968]; GCN2-mediated signaling [GO:0140469]; host-mediated suppression of viral genome replication [GO:0044828]; learning [GO:0007612]; long-term memory [GO:0007616]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of translation [GO:0017148]; negative regulation of translational initiation [GO:0045947]; negative regulation of translational initiation in response to stress [GO:0032057]; neuron projection extension [GO:1990138]; positive regulation of adaptive immune response [GO:0002821]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of translational initiation in response to starvation [GO:0071264]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of cytoplasmic translational initiation in response to stress [GO:1990611]; regulation of feeding behavior [GO:0060259]; regulation of translational initiation [GO:0006446]; regulation of translational initiation by eIF2 alpha phosphorylation [GO:0010998]; regulation of translational initiation in response to stress [GO:0043558]; response to amino acid starvation [GO:1990928]; response to endoplasmic reticulum stress [GO:0034976]; T cell activation involved in immune response [GO:0002286]; translational initiation [GO:0006413]; viral translation [GO:0019081]	hit with GO BP
GN017898	Chromosome_3A	50489	12	723	35.00762542335954	0.46882487786436366	21.44019528071603	720	0.12222222222222222	22.661469933184854	50	0.22	21.38175423638495	670	0.11492537313432835	1.2023000522739153	56	0	sparse (10-50%)	Q60954	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1)	angiogenesis [GO:0001525]; animal organ morphogenesis [GO:0009887]; blood vessel morphogenesis [GO:0048514]; brain development [GO:0007420]; cell growth involved in cardiac muscle cell development [GO:0061049]; definitive hemopoiesis [GO:0060216]; embryonic pattern specification [GO:0009880]; eye development [GO:0001654]; hemopoiesis [GO:0030097]; lens morphogenesis in camera-type eye [GO:0002089]; locomotory behavior [GO:0007626]; megakaryocyte development [GO:0035855]; negative regulation of myeloid cell differentiation [GO:0045638]; negative regulation of neuron differentiation [GO:0045665]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019934	Chromosome_3A	227	1	15	61.23348017621145	0.8248546511627907	1.109350237717908	15	0	1.109350237717908	15	0	NA	NA	NA	1.901639344262295	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017899	Chromosome_3A	471	1	20	57.11252653927813	0.5597147950089126	1.2278308321964528	20	0	1.2278308321964528	20	0	NA	NA	NA	0.7135306553911205	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017900	Chromosome_3A	195	1	8	49.743589743589745	0.6842105263157895	0	1	0	0	1	0	NA	NA	NA	0.703125	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017905	Chromosome_3A	354	1	8	42.93785310734463	0.49337979094076656	1.0526315789473684	6	0	1.0526315789473684	6	0	NA	NA	NA	3.925233644859813	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017904	Chromosome_3A	525	1	7	41.142857142857146	0.3153153153153153	1.7857142857142858	7	0	1.7857142857142858	7	0	NA	NA	NA	2.5386313465783665	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017903	Chromosome_3A	303	1	11	50.82508250825082	0.5636732623033993	0	11	0	0	11	0	NA	NA	NA	0.47134706028280826	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017902	Chromosome_3A	396	1	19	52.77777777777778	0.7788819875776397	0.2691790040376851	19	0	0.2691790040376851	19	0	NA	NA	NA	0.63500127000254	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017908	Chromosome_3A	2104	2	78	41.539923954372625	0.860125786163522	0.5929690808979247	78	0	0.6092254134029591	77	0	0	1	0	0.8636200071968334	82	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN017907	Chromosome_3A	967	4	13	36.50465356773526	0.404706715601056	0.5945303210463734	13	0	0.6024096385542169	6	0	0.5893909626719057	7	0	0.398406374501992	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017906	Chromosome_3A	2100	1	36	42.095238095238095	0.3975181407088022	93.20162696106915	36	1	93.20162696106915	36	1	NA	NA	NA	4.382470119521912	37	0.02702702702702703	methylated (>=50%)	Q9P2E2	Kinesin-like protein KIF17 (KIF3-related motor protein)	anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]	hit with GO BP
GN017909	Chromosome_3A	698	2	25	43.12320916905444	0.7835653345307588	0.4878048780487805	25	0	0.5361930294906166	24	0	0	1	0	0.6993006993006993	40	0	unmethylated (<10%)	Q17031	Cdc42 homolog (EC 3.6.5.2) (25 kDa GTP-binding protein)	actin filament organization [GO:0007015]; ameboidal-type cell migration [GO:0001667]; anatomical structure morphogenesis [GO:0009653]; cellular process involved in reproduction in multicellular organism [GO:0022412]; developmental process involved in reproduction [GO:0003006]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017910	Chromosome_3A	667	2	21	42.87856071964018	0.6851063829787234	0.5199306759098787	21	0	0.37243947858473	20	0	2.5	1	0	0.24884464984002844	47	0	unmethylated (<10%)	Q16YG0	Cdc42 homolog (EC 3.6.5.2)	ameboidal-type cell migration [GO:0001667]; anatomical structure morphogenesis [GO:0009653]; cellular process involved in reproduction in multicellular organism [GO:0022412]; developmental process involved in reproduction [GO:0003006]; hemocyte migration [GO:0035099]; maintenance of protein location [GO:0045185]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]; positive regulation of protein kinase activity [GO:0045860]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017911	Chromosome_3A	678	2	22	43.067846607669615	0.7030542986425339	1.6260162601626016	14	0	1.8181818181818181	13	0	0	1	0	0.5669737774627923	46	0	unmethylated (<10%)	Q17031	Cdc42 homolog (EC 3.6.5.2) (25 kDa GTP-binding protein)	actin filament organization [GO:0007015]; ameboidal-type cell migration [GO:0001667]; anatomical structure morphogenesis [GO:0009653]; cellular process involved in reproduction in multicellular organism [GO:0022412]; developmental process involved in reproduction [GO:0003006]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017912	Chromosome_3A	668	2	29	41.76646706586826	1.0035225859925405	0.9615384615384616	29	0	0.7731958762886598	27	0	3.5714285714285716	2	0	0.38993264799716415	52	0	unmethylated (<10%)	P17081	Rho-related GTP-binding protein RhoQ (EC 3.6.5.2) (Ras-like protein TC10) (Ras-like protein family member 7A)	actin filament organization [GO:0007015]; cellular response to insulin stimulus [GO:0032869]; cortical actin cytoskeleton organization [GO:0030866]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; GTP metabolic process [GO:0046039]; insulin receptor signaling pathway [GO:0008286]; negative regulation of protein localization to plasma membrane [GO:1903077]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of actin cytoskeleton organization [GO:0032956]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017913	Chromosome_3A	666	2	19	40.990990990990994	0.6932938856015779	0.4918032786885246	19	0	0.5102040816326531	18	0	0	1	0	0.38552787663107946	65	0	unmethylated (<10%)	P17081	Rho-related GTP-binding protein RhoQ (EC 3.6.5.2) (Ras-like protein TC10) (Ras-like protein family member 7A)	actin filament organization [GO:0007015]; cellular response to insulin stimulus [GO:0032869]; cortical actin cytoskeleton organization [GO:0030866]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; GTP metabolic process [GO:0046039]; insulin receptor signaling pathway [GO:0008286]; negative regulation of protein localization to plasma membrane [GO:1903077]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of actin cytoskeleton organization [GO:0032956]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017914	Chromosome_3A	766	2	19	41.12271540469974	0.5869968540775994	0.3929273084479371	19	0	0.4608294930875576	17	0	0	2	0	0.4517453798767967	55	0	unmethylated (<10%)	P0CY33	Cell division control protein 42 homolog (EC 3.6.5.2)	actin filament organization [GO:0007015]; budding cell apical bud growth [GO:0007118]; budding cell isotropic bud growth [GO:0007119]; cell budding [GO:0007114]; cell growth mode switching, budding to filamentous [GO:0036187]; cell morphogenesis [GO:0000902]; cell wall modification [GO:0042545]; conjugation with cellular fusion [GO:0000747]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; filamentous growth [GO:0030447]; filamentous growth of a population of unicellular organisms [GO:0044182]; filamentous growth of a population of unicellular organisms in response to biotic stimulus [GO:0036180]; hyphal growth [GO:0030448]; invasive growth in response to glucose limitation [GO:0001403]; positive regulation of exocytosis [GO:0045921]; positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus [GO:1900445]; positive regulation of pseudohyphal growth [GO:2000222]; regulation of cell growth [GO:0001558]; regulation of cell morphogenesis [GO:0022604]; regulation of exit from mitosis [GO:0007096]; regulation of exocyst localization [GO:0060178]; regulation of vacuole fusion, non-autophagic [GO:0032889]; Rho protein signal transduction [GO:0007266]; septin ring organization [GO:0031106]; septum digestion after cytokinesis [GO:0000920]	hit with GO BP
GN017915	Chromosome_3A	674	2	31	42.58160237388724	1.0477384414802928	0.40551500405515006	31	0	0.4299226139294927	29	0	0	2	0	0.400200100050025	35	0	unmethylated (<10%)	Q8R527	Rho-related GTP-binding protein RhoQ (EC 3.6.5.2) (Ras-like protein TC10)	actin cytoskeleton organization [GO:0030036]; actin filament organization [GO:0007015]; cellular response to insulin stimulus [GO:0032869]; cortical actin cytoskeleton organization [GO:0030866]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; GTP metabolic process [GO:0046039]; insulin receptor signaling pathway [GO:0008286]; negative regulation of D-glucose import across plasma membrane [GO:0046325]; negative regulation of protein localization to plasma membrane [GO:1903077]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell shape [GO:0008360]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017916	Chromosome_3A	702	2	33	48.86039886039886	0.81	1.0224948875255624	26	0	0.6493506493506493	24	0	7.407407407407407	2	0	0.4048582995951417	53	0	unmethylated (<10%)	Q05062	Cell division control protein 42 homolog (EC 3.6.5.2) (CDC42Ce)	actin filament organization [GO:0007015]; endocytosis [GO:0006897]; epithelial tube morphogenesis [GO:0060562]; establishment of cell polarity [GO:0030010]; establishment of mitotic spindle localization [GO:0040001]; establishment of mitotic spindle orientation [GO:0000132]; establishment or maintenance of cell polarity [GO:0007163]; positive regulation of clathrin-dependent endocytosis [GO:2000370]; positive regulation of nematode male tail tip morphogenesis [GO:0110039]; regulation of actin filament-based process [GO:0032970]; regulation of Golgi organization [GO:1903358]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017917	Chromosome_3A	767	2	20	39.765319426336376	0.664069264069264	0.471253534401508	20	0	0.5091649694501018	19	0	0	1	0	0.44052863436123346	67	0	unmethylated (<10%)	Q9GPQ8	Rho-related protein racL (EC 3.6.5.2)	actin filament organization [GO:0007015]; establishment or maintenance of cell polarity [GO:0007163]; mating [GO:0007618]; mitotic cytokinesis [GO:0000281]; regulation of cell shape [GO:0008360]; response to light intensity [GO:0009642]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017918	Chromosome_3A	12946	15	370	36.72949173489881	0.8475052486718639	2.3304822114788646	368	0	0.7727602028495533	111	0	2.868339864921204	257	0	23.569651741293534	26	0.19230769230769232	unmethylated (<10%)	F1NZI4	Protein-glucosylgalactosylhydroxylysine glucosidase (EC 3.2.1.107) (Acid trehalase-like protein 1)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN017919	Chromosome_3A	3082	4	61	33.29007138221934	0.7144018847849217	63.817005545286506	61	0.7377049180327869	28.90625	8	0.25	68.50104821802935	53	0.8113207547169812	56.13845321795565	38	0.5526315789473685	methylated (>=50%)	P14621	Acylphosphatase-2 (EC 3.6.1.7) (Acylphosphatase, muscle type isozyme) (Acylphosphate phosphohydrolase 2)	phosphate-containing compound metabolic process [GO:0006796]	hit with GO BP
GN017920	Chromosome_3A	34282	33	449	35.05338078291815	0.43535542605533817	88.85956382830949	442	0.9886877828054299	94.1855304039059	91	1	87.87155207904487	351	0.9857549857549858	96.40102827763496	28	1	methylated (>=50%)	F1R2X6	Proteasome activator complex subunit 4B (Proteasome activator PA200-B)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; proteasomal ubiquitin-independent protein catabolic process [GO:0010499]; sperm DNA condensation [GO:0035092]	hit with GO BP
GN017921	Chromosome_3A	25915	22	280	34.99517653868416	0.35301585744779684	81.4231114047091	278	0.9100719424460432	92.4992588200415	63	0.9841269841269841	79.32659932659932	215	0.8883720930232558	0.5595970900951315	55	0	methylated (>=50%)	Q14697	Neutral alpha-glucosidase AB (EC 3.2.1.207) (Alpha-glucosidase 2) (Glucosidase II subunit alpha)	carbohydrate metabolic process [GO:0005975]; N-glycan processing [GO:0006491]	hit with GO BP
GN017922	Chromosome_3A	5858	7	63	34.05599180607716	0.37919753403544826	82.17845277645942	63	0.9365079365079365	58.23605706874189	14	0.7142857142857143	87.53993610223642	49	1	51.62758137906896	37	0.4594594594594595	methylated (>=50%)	Q8K1J6	CCA tRNA nucleotidyltransferase 1, mitochondrial (EC 2.7.7.72) (mitochondrial tRNA nucleotidyl transferase, CCA-adding) (mt CCA-adding enzyme) (mt tRNA CCA-diphosphorylase) (mt tRNA CCA-pyrophosphorylase) (mt tRNA adenylyltransferase)	mitochondrial tRNA 3'-end processing [GO:1990180]; rescue of stalled cytosolic ribosome [GO:0072344]; tRNA 3'-terminal CCA addition [GO:0001680]; tRNA processing [GO:0008033]; tRNA surveillance [GO:0106354]	hit with GO BP
GN017923	Chromosome_3A	1212	1	57	45.87458745874587	0.8961706102117061	0.7473841554559043	57	0	0.7473841554559043	57	0	NA	NA	NA	0.6151742993848257	57	0	unmethylated (<10%)	Q90964	Forkhead box protein G1 (FoxG1) (Brain factor 1) (BF-1) (BF1) (cBF-1) (CEQ 3-1) (Forkhead-related protein FKHL1) (N-62-5) (Proto-oncogene C-QIN)	negative regulation of DNA-templated transcription [GO:0045892]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN017924	Chromosome_3A	1812	4	65	39.90066225165563	0.9081656257228776	0.9593679458239278	65	0	0.6360745115856429	42	0	1.4892032762472078	23	0	1.0676156583629892	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017925	Chromosome_3A	705	1	40	43.829787234042556	1.1816962789138452	0.5007153075822603	40	0	0.5007153075822603	40	0	NA	NA	NA	1.7828200972447326	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017928	Chromosome_3A	36744	25	423	38.35183975615067	0.33633128797794937	85.71124512238383	233	0.9570815450643777	91.32804757185332	34	1	84.77270845408628	199	0.949748743718593	93.20388349514563	25	1	methylated (>=50%)	Q8TCS8	Polyribonucleotide nucleotidyltransferase 1, mitochondrial (EC 2.7.7.8) (3'-5' RNA exonuclease OLD35) (PNPase old-35) (Polynucleotide phosphorylase 1) (PNPase 1) (Polynucleotide phosphorylase-like protein)	cellular response to interferon-beta [GO:0035458]; cellular response to oxidative stress [GO:0034599]; liver regeneration [GO:0097421]; mitochondrial mRNA catabolic process [GO:0000958]; mitochondrial mRNA polyadenylation [GO:0097222]; mitochondrial RNA 3'-end processing [GO:0000965]; mitochondrial RNA 5'-end processing [GO:0000964]; mitochondrial RNA catabolic process [GO:0000957]; mitochondrion organization [GO:0007005]; mRNA catabolic process [GO:0006402]; nuclear polyadenylation-dependent mRNA catabolic process [GO:0071042]; positive regulation of miRNA catabolic process [GO:2000627]; positive regulation of mitochondrial RNA catabolic process [GO:0000962]; positive regulation of mRNA catabolic process [GO:0061014]; protein homooligomerization [GO:0051260]; protein homotrimerization [GO:0070207]; regulation of cellular respiration [GO:0043457]; regulation of cellular senescence [GO:2000772]; response to cAMP [GO:0051591]; response to growth hormone [GO:0060416]; RNA catabolic process [GO:0006401]; RNA import into mitochondrion [GO:0035927]; rRNA import into mitochondrion [GO:0035928]	hit with GO BP
GN017929	Chromosome_3A	633	1	3	42.18009478672986	0.12055611985779584	85.91549295774648	3	1	85.91549295774648	3	1	NA	NA	NA	88.8641425389755	7	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017930	Chromosome_3A	2341	7	27	37.67620674925246	0.32560787141974035	84.70350404312669	27	0.9259259259259259	90.48316251830161	13	1	79.7752808988764	14	0.8571428571428571	92.0611798980335	60	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017931	Chromosome_3A	12198	9	296	35.88293162813576	0.7540637400275678	2.954856361149111	291	0	4.256712508185986	39	0	2.8030245169174366	252	0	2.1264028352037805	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002502	Chromosome_3A	426	1	25	50.93896713615023	0.9288330716902146	1.2594458438287153	25	0	1.2594458438287153	25	0	NA	NA	NA	0.6948465547191662	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017932	Chromosome_3A	878	2	17	38.61047835990888	0.5228387277567605	1.3358778625954197	17	0	1.2658227848101267	15	0	2	2	0	0.7259528130671506	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017933	Chromosome_3A	18690	10	532	36.340288924558585	0.8640495119067637	0.6551133117501429	526	0	0.6840796019900498	91	0	0.6510699249099353	435	0	0.6089743589743589	70	0	unmethylated (<10%)	Q9DBM0	ATP-binding cassette sub-family G member 8 (EC 7.6.2.-) (Sterolin-2)	cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; intestinal cholesterol absorption [GO:0030299]; negative regulation of intestinal cholesterol absorption [GO:0045796]; negative regulation of intestinal phytosterol absorption [GO:0010949]; phospholipid transport [GO:0015914]; sterol homeostasis [GO:0055092]; sterol transport [GO:0015918]	hit with GO BP
GN017934	Chromosome_3A	10204	10	300	38.102704821638575	0.8100523549125896	0.727876388711531	299	0	0.6842285323297982	88	0	0.7378915142475861	211	0	0.5911636589919104	70	0	unmethylated (<10%)	Q99PE7	ATP-binding cassette sub-family G member 5 (EC 7.6.2.-) (Sterolin-1)	cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; negative regulation of intestinal cholesterol absorption [GO:0045796]; negative regulation of intestinal phytosterol absorption [GO:0010949]; response to ionizing radiation [GO:0010212]; response to muscle activity [GO:0014850]; response to nutrient [GO:0007584]; response to nutrient levels [GO:0031667]; response to xenobiotic stimulus [GO:0009410]; sterol transport [GO:0015918]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN017935	Chromosome_3A	4912	4	168	39.88192182410423	0.8629908348218207	0.4553215708594195	128	0	0.547945205479452	36	0	0.41983731304119654	92	0	0.5693950177935944	67	0	unmethylated (<10%)	Q61241	Testis-specific serine/threonine-protein kinase 1 (TSK-1) (TSK1) (TSSK-1) (Testis-specific kinase 1) (EC 2.7.11.1) (Serine/threonine-protein kinase 22A)	gene expression [GO:0010467]; skin development [GO:0043588]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]	hit with GO BP
GN017936	Chromosome_3A	969	1	41	44.89164086687307	0.8441125228402668	0.30959752321981426	41	0	0.30959752321981426	41	0	NA	NA	NA	0.3316138540899042	42	0	unmethylated (<10%)	O54863	Testis-specific serine/threonine-protein kinase 2 (TSK-2) (TSK2) (TSSK-2) (Testis-specific kinase 2) (EC 2.7.11.1) (Serine/threonine-protein kinase 22B)	protein autophosphorylation [GO:0046777]; spermatid development [GO:0007286]	hit with GO BP
GN017937	Chromosome_3A	28111	30	416	35.537689872291985	0.4718832778325332	61.31721901713901	413	0.6585956416464891	57.25010725010725	99	0.5959595959595959	62.31071522137805	314	0.678343949044586	0.41341295360587965	59	0	methylated (>=50%)	Q9D565	WD repeat-containing protein 64	NA	hit, no GO BP
GN017938	Chromosome_3A	6680	5	192	35.0748502994012	0.9350449383810518	0.5651262419104913	192	0	0.7761966364812419	50	0	0.5085529357374018	142	0	0.6057886470720215	60	0	unmethylated (<10%)	O42358	Retinal homeobox protein Rx3	adenohypophysis development [GO:0021984]; camera-type eye morphogenesis [GO:0048593]; cell fate specification [GO:0001708]; embryonic camera-type eye morphogenesis [GO:0048596]; eye development [GO:0001654]; eye field cell fate commitment involved in camera-type eye formation [GO:0060898]; forebrain development [GO:0030900]; hypothalamus development [GO:0021854]; neural crest cell migration [GO:0001755]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]	hit with GO BP
GN017939	Chromosome_3A	1233	1	48	44.038929440389296	0.8036936447582835	0.37936267071320184	48	0	0.37936267071320184	48	0	NA	NA	NA	0.5800068236096895	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017940	Chromosome_3A	1673	2	57	44.17214584578601	0.7049678420935906	0.576036866359447	57	0	0.6622516556291391	53	0	0	4	0	0.40180813661476644	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017941	Chromosome_3A	1281	3	29	37.15846994535519	0.6625704501676536	2.535211267605634	29	0	1.949317738791423	22	0	4.060913705583756	7	0	0.5142405063291139	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017942	Chromosome_3A	2589	7	74	35.03283120896099	0.9323827136460969	0.9536423841059603	73	0	1.0389610389610389	40	0	0.8648648648648649	33	0	0.5305867665418227	59	0	unmethylated (<10%)	F1RWC3	Cubilin (Intrinsic factor-cobalamin receptor)	NA	hit, no GO BP
GN017943	Chromosome_3A	10315	17	304	39.379544352884146	0.7611747845438621	0.704225352112676	302	0	0.5230335948501308	152	0	0.8311029722496126	150	0	0.5644090305444888	46	0	unmethylated (<10%)	Q6ZG77	Probable diaminopimelate decarboxylase, chloroplastic (DAP decarboxylase) (DAPDC) (EC 4.1.1.20)	NA	hit, no GO BP
GN017944	Chromosome_3A	252	1	10	53.96825396825397	0.5691056910569106	0.40816326530612246	10	0	0.40816326530612246	10	0	NA	NA	NA	0.5456634118322803	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017945	Chromosome_3A	4379	6	100	37.976707010733044	0.638910044850639	0.5390835579514824	100	0	0.7242628039317124	50	0	0.39698292973402144	50	0	0.7129455909943715	53	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN017946	Chromosome_3A	7067	9	211	35.3756898259516	0.9555115970892575	1.843428297821403	211	0	0.5878030859662013	88	0	2.450284090909091	123	0	0.33855268726195514	46	0	unmethylated (<10%)	G5EF51	Lim and transglutaminase domain protein ltd-1 (Kyphoscoliosis inactive peptidase homolog ltd-1)	muscle structure development [GO:0061061]	hit with GO BP
GN017947	Chromosome_3A	4257	9	144	39.0415785764623	0.8892731556164193	0.46661880832735103	137	0	0.4710808688824915	94	0	0.4568817818389492	43	0	0.2905100064557779	47	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN017948	Chromosome_3A	3028	8	98	40.5217965653897	0.7906300123092991	0.7192174913693901	98	0	0.7191780821917808	83	0	0.7194244604316546	15	0	0.6887052341597796	43	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN017949	Chromosome_3A	3656	7	110	40.098468271334795	0.7485486353729063	1.242376327083804	110	0	1.1616329239960173	81	0	1.4144271570014144	29	0	0.5604203152364273	57	0	unmethylated (<10%)	G5EF51	Lim and transglutaminase domain protein ltd-1 (Kyphoscoliosis inactive peptidase homolog ltd-1)	muscle structure development [GO:0061061]	hit with GO BP
GN017950	Chromosome_3A	159	1	16	64.77987421383648	0.96	0.15060240963855423	16	0	0.15060240963855423	16	0	NA	NA	NA	0.26490066225165565	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017951	Chromosome_3A	3387	10	80	36.935341009743134	0.6929746042300708	1.7903415783274441	76	0	1.9748042219952333	56	0	1.3761467889908257	20	0	0.6831318970047294	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017952	Chromosome_3A	1647	3	53	39.70856102003643	0.8204041353383459	0.4151530877010898	53	0	0.4728132387706856	48	0	0	5	0	0.7425742574257426	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017953	Chromosome_3A	588	1	12	43.02721088435374	0.4834201151000274	1.2121212121212122	12	0	1.2121212121212122	12	0	NA	NA	NA	0.7453416149068323	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017954	Chromosome_3A	360	1	9	43.333333333333336	0.5382059800664452	0.967741935483871	9	0	0.967741935483871	9	0	NA	NA	NA	0.9389671361502347	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017955	Chromosome_3A	19722	15	299	36.725484230808235	0.4506066236646959	87.94357094027717	299	0.9632107023411371	91.28978224455611	36	1	87.52447552447552	263	0.9581749049429658	85.4317998385795	27	1	methylated (>=50%)	Q28CE7	Proton-coupled zinc antiporter SLC30A5 (Solute carrier family 30 member 5) (Zinc transporter 5) (ZnT-5)	GPI anchor biosynthetic process [GO:0006506]; intracellular zinc ion homeostasis [GO:0006882]; zinc ion import into Golgi lumen [GO:1904257]; zinc ion import into organelle [GO:0062111]	hit with GO BP
GN017956	Chromosome_3A	1335	1	34	42.32209737827716	0.5706993235597354	95.60362875087229	34	1	95.60362875087229	34	1	NA	NA	NA	90.54982817869416	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017957	Chromosome_3A	708	1	30	45.621468926553675	0.8144171779141104	0.3568242640499554	30	0	0.3568242640499554	30	0	NA	NA	NA	0.5886426592797784	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017958	Chromosome_3A	1086	1	47	44.01473296500921	0.8941403170710345	0.7033248081841432	47	0	0.7033248081841432	47	0	NA	NA	NA	0.7439310884886453	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017968	Chromosome_3A	2519	2	63	37.673680031758636	0.7085952848722986	1.051105472997463	63	0	0.8733624454148472	20	0	1.086484137331595	43	0	0.492091388400703	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017967	Chromosome_3A	1877	4	66	38.35908364411295	0.956145225525609	0.8132530120481928	66	0	1.521555367709214	31	0	0.42115114646700985	35	0	0.6205923836389281	49	0	unmethylated (<10%)	B0G143	Mitochondrial substrate carrier family protein ucpB (Solute carrier family 25 member 30 homolog) (Uncoupler protein B)	response to cadmium ion [GO:0046686]; transmembrane transport [GO:0055085]	hit with GO BP
GN017966	Chromosome_3A	201	1	13	51.74129353233831	0.9720982142857143	0.9966777408637874	13	0	0.9966777408637874	13	0	NA	NA	NA	0.7708911501695961	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017965	Chromosome_3A	17848	10	269	34.345584939489015	0.5124670909551828	80.92602448110698	268	0.9029850746268657	64.66480446927375	13	0.7692307692307693	81.57021135332522	255	0.9098039215686274	2.2839506172839505	47	0	methylated (>=50%)	Q6GNQ4	G kinase-anchoring protein 1-A	signal transduction [GO:0007165]	hit with GO BP
GN017964	Chromosome_3A	17186	14	386	36.12242522983824	0.6922584054484102	0.7124598901397726	385	0	0.5340453938584779	65	0	0.7372986369268897	320	0	1.2850862360500508	71	0	unmethylated (<10%)	A8WHP3	Sodium/glucose cotransporter 4 (Na(+)/glucose cotransporter 4) (Solute carrier family 5 member 9)	NA	hit, no GO BP
GN017963	Chromosome_3A	3251	5	61	33.83574284835435	0.6556797630029327	0.8194138039710054	61	0	1.0008340283569641	25	0	0.7092198581560284	36	0	0.513874614594039	59	0	unmethylated (<10%)	Q7SZ59	Ras-like protein family member 12 (EC 3.6.5.2) (RAS-like protein Ris)	small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN017962	Chromosome_3A	879	1	34	41.75199089874858	0.8877205489217608	0.4645760743321719	34	0	0.4645760743321719	34	0	NA	NA	NA	8.079658605974396	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017960	Chromosome_3A	18765	15	465	35.550226485478284	0.784296198263672	0.9805919209413683	441	0	0.9009009009009009	71	0	0.9916205166864798	370	0	0.43327556325823224	63	0	unmethylated (<10%)	O16025	Allene oxide synthase-lipoxygenase protein [Includes: Allene oxide synthase (AOS) (EC 4.2.1.-) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)]	arachidonate metabolic process [GO:0019369]; lipid oxidation [GO:0034440]	hit with GO BP
GN017971	Chromosome_3A	3570	4	113	36.1624649859944	0.9838596388539319	1.9524048935813643	99	0	2.7542096332071533	65	0	0.5148607535689211	34	0	0.8272506082725061	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019991	Chromosome_3A	748	1	21	34.893048128342244	0.9323361823361823	0.9565857247976454	21	0	0.9565857247976454	21	0	NA	NA	NA	0.7595976185588175	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017970	Chromosome_3A	1074	1	24	34.171322160148975	0.7771814508834348	0.9189640768588136	24	0	0.9189640768588136	24	0	NA	NA	NA	0.8954763007565231	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017973	Chromosome_3A	942	1	27	35.45647558386412	0.9215217391304348	0.42036431574030825	27	0	0.42036431574030825	27	0	NA	NA	NA	0.9983556495184402	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017969	Chromosome_3A	726	1	24	36.91460055096419	0.9862455425369333	1.0334511830296438	24	0	1.0334511830296438	24	0	NA	NA	NA	0.44688896528016503	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017974	Chromosome_3A	759	1	11	39.130434782608695	0.3845693228926762	3.0434782608695654	11	0	3.0434782608695654	11	0	NA	NA	NA	2.793296089385475	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017975	Chromosome_3A	2560	2	15	34.1796875	0.20195008046448518	0.9561752988047809	15	0	0.2604166666666667	5	0	1.2629161882893227	10	0	1.1390111312451463	71	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN017976	Chromosome_3A	3860	5	32	33.73056994818653	0.29216348098406486	0.31803725579282144	32	0	0.1654715940430226	12	0	0.4248744689069139	20	0	2.1947873799725652	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017977	Chromosome_3A	345	1	7	44.63768115942029	0.4090447154471545	3.361344537815126	7	0	3.361344537815126	7	0	NA	NA	NA	7.238734419942474	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017978	Chromosome_3A	1524	2	42	48.62204724409449	0.46801789944722294	0.8274231678486997	36	0	0.8274231678486997	36	0	NA	NA	NA	0.9615384615384616	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017979	Chromosome_3A	17464	8	298	34.923270728355476	0.5598525784252871	79.90073486976262	294	0.9421768707482994	91.73469387755102	18	1	79.43704769901244	276	0.9384057971014492	93.19869319869319	47	1	methylated (>=50%)	Q5FVR5	Acyl-coenzyme A amino acid N-acyltransferase 2 (EC 2.3.1.-)	acyl-CoA metabolic process [GO:0006637]; bile acid metabolic process [GO:0008206]; fatty acid metabolic process [GO:0006631]	hit with GO BP
GN017980	Chromosome_3A	4136	6	155	39.676015473887816	0.9528537455410226	1.2299724874575173	154	0	0.9074410163339383	91	0	1.4894859813084111	63	0	0.6477483035163479	50	0	unmethylated (<10%)	Q07553	Guanylate cyclase 32E (EC 4.6.1.2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN017981	Chromosome_3A	884	2	12	35.294117647058826	0.4424608967674661	0.539568345323741	12	0	0.635593220338983	10	0	0	2	0	0.7269789983844911	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017982	Chromosome_3A	5052	6	127	37.826603325415675	0.7099996901516928	0.7039155301363836	127	0	0.6958250497017893	95	0	0.7198952879581152	32	0	0.28429282160625446	39	0	unmethylated (<10%)	Q07553	Guanylate cyclase 32E (EC 4.6.1.2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN017983	Chromosome_3A	5773	12	176	36.80928460072752	0.9075146883602448	0.5473510275740989	176	0	0.48977239988475946	65	0	0.5795235028976176	111	0	4.090657822001106	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017984	Chromosome_3A	996	1	1	59.53815261044177	0.011331058020477815	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017985	Chromosome_3A	765	2	1	59.869281045751634	0.01459478021978022	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017986	Chromosome_3A	234	1	1	61.53846153846154	0.04517374517374517	NA	0	NA	NA	NA	NA	NA	NA	NA	81.17647058823529	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN017987	Chromosome_3A	801	1	2	59.80024968789014	0.02794933528734429	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017988	Chromosome_3A	429	1	0	59.67365967365967	0	NA	0	NA	NA	NA	NA	NA	NA	NA	79.14345403899722	37	0.972972972972973	NA	NA	NA	NA	no Swiss-Prot hit
GN017989	Chromosome_3A	693	3	24	37.80663780663781	0.9737704918032787	0.4073319755600815	24	0	0.3225806451612903	15	0	0.5524861878453039	9	0	1.0085728693898135	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017994	Chromosome_3A	1212	1	53	49.834983498349835	0.7798659673659674	0.5579665220086795	53	0	0.5579665220086795	53	0	NA	NA	NA	24.374319912948856	47	0.2553191489361702	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017995	Chromosome_3A	545	2	14	44.03669724770642	0.5371726274288933	2.358490566037736	11	0	2.0408163265306123	9	0	3.076923076923077	2	0	0.6537530266343826	59	0	unmethylated (<10%)	P31795	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4); Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; establishment of integrated proviral latency [GO:0075713]; symbiont entry into host cell [GO:0046718]; viral genome integration into host DNA [GO:0044826]	hit with GO BP
GN017996	Chromosome_3A	892	2	34	42.26457399103139	0.8567231638418079	0.5227391531625719	34	0	0.37082818294190356	31	0	1.3559322033898304	3	0	0.7062733693394266	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017997	Chromosome_3A	2043	1	86	42.04601076847773	0.9535330511234126	0.6253722453841573	86	0	0.6253722453841573	86	0	NA	NA	NA	1.1498973305954825	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017998	Chromosome_3A	504	1	31	48.80952380952381	1.041044776119403	0.48602673147023084	31	0	0.48602673147023084	31	0	NA	NA	NA	0.48227634434530986	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018020	Chromosome_3A	321	1	14	55.14018691588785	0.6766034327009937	0.6493506493506493	14	0	0.6493506493506493	14	0	NA	NA	NA	0.5499153976311336	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018019	Chromosome_3A	165	1	8	53.93939393939394	0.8058608058608059	0	8	0	0	8	0	NA	NA	NA	0.5175600739371534	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018018	Chromosome_3A	273	1	12	54.21245421245421	0.5992317541613317	0.352112676056338	12	0	0.352112676056338	12	0	NA	NA	NA	0.4771260174010665	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018017	Chromosome_3A	983	2	47	47.4059003051882	0.8644102679239635	0.7226738934056007	46	0	0.6309148264984227	43	0	1.2820512820512822	3	0	0.49247606019151846	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018016	Chromosome_3A	303	1	11	53.135313531353134	0.5143518518518518	0.4975124378109453	10	0	0.4975124378109453	10	0	NA	NA	NA	0.4466098254161592	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018015	Chromosome_3A	645	2	26	47.5968992248062	0.7234060909326201	0.5055611729019212	26	0	0.639386189258312	23	0	0	3	0	0.7071302298173247	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018014	Chromosome_3A	309	1	10	45.63106796116505	0.6331967213114754	0.24449877750611246	10	0	0.24449877750611246	10	0	NA	NA	NA	0.3187250996015936	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018013	Chromosome_3A	180	1	8	51.666666666666664	0.694980694980695	0.4366812227074236	8	0	0.4366812227074236	8	0	NA	NA	NA	0.3213367609254499	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018012	Chromosome_3A	450	1	10	44.22222222222222	0.4564820450395618	0.8928571428571429	8	0	0.8928571428571429	8	0	NA	NA	NA	0.46415678184631254	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018011	Chromosome_3A	330	1	19	48.484848484848484	0.9952380952380953	0.7168458781362007	19	0	0.7168458781362007	19	0	NA	NA	NA	0.8244994110718492	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018010	Chromosome_3A	69894	31	897	36.93879302944459	0.37622645363602236	76.3353441732252	838	0.8078758949880668	84.44954586286056	235	0.9234042553191489	74.3051219938566	603	0.7628524046434494	12.144702842377262	15	0.2	methylated (>=50%)	B1AVY7	Kinesin-like protein KIF16B	cellular response to type II interferon [GO:0071346]; early endosome to late endosome transport [GO:0045022]; endoderm development [GO:0007492]; epidermal growth factor receptor signaling pathway [GO:0007173]; fibroblast growth factor receptor signaling pathway [GO:0008543]; formation of primary germ layer [GO:0001704]; Golgi to endosome transport [GO:0006895]; receptor catabolic process [GO:0032801]; regulation of receptor recycling [GO:0001919]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN018009	Chromosome_3A	1218	1	45	41.95402298850575	0.8407731247123792	0.6102877070619006	44	0	0.6102877070619006	44	0	NA	NA	NA	14.909638554216867	52	0.038461538461538464	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018008	Chromosome_3A	3633	2	114	40.6000550509221	0.7628501014893703	1.006820396232543	114	0	0.37629350893697083	39	0	1.3392857142857142	75	0	11.183027687882056	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018006	Chromosome_3A	1420	2	49	44.50704225352113	0.6971454907972386	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018007	Chromosome_3A	1420	2	49	44.50704225352113	0.6971454907972386	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018005	Chromosome_3A	1420	2	49	44.57746478873239	0.694993807183667	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5700712589073634	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018004	Chromosome_3A	4380	4	128	35.593607305936075	0.9251790488134922	3.0523759972251128	127	0	0.9461426491994177	36	0	3.7112932604735884	91	0	34.231041814316086	34	0.3235294117647059	unmethylated (<10%)	Q9YGL1	Speedy protein 1-B (Spy1-B) (Protein Ls27) (Rapid inducer of G2/M progression in oocytes B) (RINGO-B) (XSpy1-B) (p33 ringo-B) (xRINGO-B)	G2/MI transition of meiotic cell cycle [GO:0008315]; oocyte maturation [GO:0001556]; positive regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045737]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of meiotic cell cycle [GO:0051446]	hit with GO BP
GN018003	Chromosome_3A	12272	14	190	35.00651890482399	0.5059278932111302	86.02278120550545	190	0.9315789473684211	75.40785498489426	35	0.8571428571428571	87.62173477746427	155	0.9483870967741935	0.8513575701794753	48	0	methylated (>=50%)	Q5XHH7	E3 ubiquitin-protein ligase synoviolin B (EC 2.3.2.27) (RING-type E3 ubiquitin transferase synoviolin B) (Synovial apoptosis inhibitor 1-B)	ERAD pathway [GO:0036503]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN018002	Chromosome_3A	225	1	11	56.44444444444444	0.6428571428571429	0.5617977528089888	11	0	0.5617977528089888	11	0	NA	NA	NA	0.2864303616183315	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018001	Chromosome_3A	636	2	35	48.899371069182386	1.1503875968992248	1.0263929618768328	33	0	0.9077155824508321	31	0	4.761904761904762	2	0	0.9530791788856305	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018000	Chromosome_3A	699	1	38	46.065808297567955	1.032536443148688	0.5376344086021505	38	0	0.5376344086021505	38	0	NA	NA	NA	0.8039147151345684	58	0	unmethylated (<10%)	P41894	Helix-loop-helix protein delilah (Protein taxi)	anatomical structure morphogenesis [GO:0009653]; cell adhesion mediated by integrin [GO:0033627]; imaginal disc-derived wing vein specification [GO:0007474]; mesoderm development [GO:0007498]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; somatic muscle development [GO:0007525]	hit with GO BP
GN017999	Chromosome_3A	345	1	13	41.44927536231884	0.8930704898446834	0.4580152671755725	13	0	0.4580152671755725	13	0	NA	NA	NA	0.9615384615384616	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018021	Chromosome_3A	3253	3	117	38.979403627420844	0.9535359153394614	0.801862390067253	94	0	0.8021390374331551	60	0	0.8017492711370262	34	0	2.2859922178988326	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018022	Chromosome_3A	4815	4	27	38.98234683281412	0.14761687400362442	78.02197802197803	23	0.9565217391304348	83.9572192513369	6	1	76.48686030428769	17	0.9411764705882353	89.52380952380952	44	1	methylated (>=50%)	Q9QXN3	Activating signal cointegrator 1 (ASC-1) (Thyroid receptor-interacting protein 4) (TR-interacting protein 4) (TRIP-4)	estrogen receptor signaling pathway [GO:0030520]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA-templated transcription [GO:0006355]; regulation of myoblast differentiation [GO:0045661]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN018025	Chromosome_3A	229	1	0	37.55458515283843	0	NA	0	NA	NA	NA	NA	NA	NA	NA	89.55259975816203	51	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018023	Chromosome_3A	278	1	0	37.410071942446045	0	NA	0	NA	NA	NA	NA	NA	NA	NA	90.17951425554382	46	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018024	Chromosome_3A	349	1	0	37.249283667621775	0	NA	0	NA	NA	NA	NA	NA	NA	NA	90.57665260196906	43	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018059	Chromosome_3A	1051	2	33	41.294005708848715	0.738800724251784	0.7055805003207184	33	0	1.3280212483399734	19	0	0.12406947890818859	14	0	0.8978910002088119	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018056	Chromosome_3A	6926	6	184	37.005486572336125	0.7782260083661567	4.052684903748734	184	0	4.87012987012987	19	0	3.9443488238668962	165	0	1.2218045112781954	59	0	unmethylated (<10%)	Q9W2Q5	Calcium and integrin-binding family member 2	calcium ion homeostasis [GO:0055074]; phototransduction [GO:0007602]	hit with GO BP
GN018055	Chromosome_3A	1743	1	87	47.96328169822146	0.8680129823296069	0.6653359946773121	73	0	0.6653359946773121	73	0	NA	NA	NA	2.968460111317254	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018054	Chromosome_3A	31372	15	547	35.90781588677802	0.5427588272995183	89.81651979481784	521	0.980806142034549	95.20267757530681	52	1	89.29408794142049	469	0.9786780383795309	1.90018315018315	51	0	methylated (>=50%)	A0JMK9	Chromatin assembly factor 1 subunit A (CAF-1 subunit A) (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-I p150)	DNA replication-dependent chromatin assembly [GO:0006335]	hit with GO BP
GN018053	Chromosome_3A	3785	9	126	38.94319682959049	0.878072221721015	1.793103448275862	109	0	2.233049127080796	69	0	1.2188659247482776	40	0	1.7470881863560732	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018052	Chromosome_3A	24239	8	466	36.22261644457279	0.5862619117650799	77.88268451646996	448	0.8214285714285714	91.26884422110552	34	1	77.08729892136006	414	0.8067632850241546	57.707369170523314	37	0.7567567567567568	methylated (>=50%)	P20397	Nucleolin (Protein C23)	3'-UTR-mediated mRNA stabilization [GO:0070935]	hit with GO BP
GN018051	Chromosome_3A	457	3	3	36.98030634573304	0.1956335616438356	58.4	3	0.6666666666666666	58.4	3	0.6666666666666666	NA	NA	NA	51.34687111479486	31	0.7096774193548387	NA	NA	NA	NA	no Swiss-Prot hit
GN018050	Chromosome_3A	480	2	4	39.375	0.2194787379972565	83.07692307692308	4	1	72.46376811594203	2	1	95.08196721311475	2	1	80.12907608695652	32	0.90625	NA	Q63276	Bile acid-CoA:amino acid N-acyltransferase (BACAT) (BAT) (EC 2.3.1.65) (Bile acid-CoA thioesterase) (Choloyl-CoA hydrolase) (EC 3.1.2.27) (Glycine N-choloyltransferase) (Kan-1) (Long-chain fatty-acyl-CoA hydrolase) (EC 3.1.2.2)	acyl-CoA metabolic process [GO:0006637]; animal organ regeneration [GO:0031100]; bile acid biosynthetic process [GO:0006699]; bile acid conjugation [GO:0002152]; bile acid metabolic process [GO:0008206]; fatty acid metabolic process [GO:0006631]; glycine metabolic process [GO:0006544]; liver development [GO:0001889]; taurine metabolic process [GO:0019530]	hit with GO BP
GN018049	Chromosome_3A	906	2	30	36.203090507726266	1.0228812283606805	3.155940594059406	30	0	5.131414267834794	11	0	1.2239902080783354	19	0	1.2140575079872205	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018048	Chromosome_3A	764	1	21	36.12565445026178	1.0232142857142856	0.437636761487965	21	0	0.437636761487965	21	0	NA	NA	NA	1.9938650306748467	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018047	Chromosome_3A	1359	1	19	42.531272994849154	0.3341226708074534	91.12903225806451	19	1	91.12903225806451	19	1	NA	NA	NA	92.21871713985279	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018046	Chromosome_3A	3271	3	106	36.2885967594008	0.9850114487985864	0.8008356545961003	106	0	0.9363295880149812	24	0	0.7698887938408896	82	0	0.48265460030165913	67	0	unmethylated (<10%)	Q17QM9	CB1 cannabinoid receptor-interacting protein 1 (CRIP-1)	NA	hit, no GO BP
GN018045	Chromosome_3A	2799	2	36	39.94283672740264	0.32256763375493386	41.988950276243095	36	0.5833333333333334	41.988950276243095	36	0.5833333333333334	NA	NA	NA	36.6060093101989	33	0.48484848484848486	sparse (10-50%)	Q5ZLL7	WD repeat-containing protein 91	early endosome to late endosome transport [GO:0045022]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]	hit with GO BP
GN018043	Chromosome_3A	18861	7	231	35.86766343247972	0.3809464811450819	80.51061303250705	230	0.9	71.71521035598705	32	0.84375	81.64976108642803	198	0.9090909090909091	94.00082747207281	27	1	methylated (>=50%)	Q80WT5	Aftiphilin	NA	hit, no GO BP
GN018042	Chromosome_3A	6108	5	186	37.60641781270465	0.8615146620561003	1.0492505353319057	185	0	0.3780718336483932	40	0	1.186637430671998	145	0	0.35949670461354105	56	0	unmethylated (<10%)	Q96T55	Potassium channel subfamily K member 16 (2P domain potassium channel Talk-1) (TWIK-related alkaline pH-activated K(+) channel 1) (TALK-1)	endoplasmic reticulum calcium ion homeostasis [GO:0032469]; membrane repolarization during action potential [GO:0086011]; potassium ion transport [GO:0006813]; regulation of action potential [GO:0098900]; regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0061178]; regulation of release of sequestered calcium ion into cytosol [GO:0051279]	hit with GO BP
GN018041	Chromosome_3A	249	1	13	40.963855421686745	1.2684169278996866	0.5970149253731343	13	0	0.5970149253731343	13	0	NA	NA	NA	1.1190689346463742	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018040	Chromosome_3A	1233	1	56	44.12003244120032	0.9432786885245902	0.5720823798627003	39	0	0.5720823798627003	39	0	NA	NA	NA	2.8967254408060454	34	0	unmethylated (<10%)	Q5QD04	Trace amine-associated receptor 9 (TaR-9) (Trace amine receptor 9) (mTaar9)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN018039	Chromosome_3A	33698	17	392	35.15342156804558	0.37669081274588806	80.67422511531663	391	0.907928388746803	71.57894736842105	34	0.8529411764705882	81.31198966646676	357	0.9131652661064426	19.469026548672566	44	0.36363636363636365	methylated (>=50%)	Q3B8R1	Endoplasmic reticulum membrane-associated RNA degradation protein (ER membrane-associated RNA degradation protein)	NA	hit, no GO BP
GN018037	Chromosome_3A	43867	19	493	36.6129436706408	0.3369171100410172	74.86945169712794	413	0.8547215496368039	82.70348837209302	63	0.9523809523809523	73.71630295250321	350	0.8371428571428572	9.675810473815462	55	0	methylated (>=50%)	Q9R1S8	Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH)	positive regulation of epithelial cell migration [GO:0010634]; proteolysis [GO:0006508]; self proteolysis [GO:0097264]	hit with GO BP
GN018036	Chromosome_3A	1851	1	61	39.97839005942733	0.8248663101604278	1.8583042973286876	61	0	1.8583042973286876	61	0	NA	NA	NA	0.7891156462585034	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018035	Chromosome_3A	1365	2	48	37.50915750915751	1.0127521446788779	0.3961267605633803	48	0	0.37735849056603776	46	0	0.6578947368421053	2	0	0.5254860746190226	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018034	Chromosome_3A	1049	2	37	43.755958055290755	0.7374971498061869	NA	0	NA	NA	NA	NA	NA	NA	NA	0.09803921568627451	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018033	Chromosome_3A	28596	24	339	34.91747097496153	0.39166667676737066	84.24690877227144	335	0.9402985074626866	84.85639686684073	51	0.9607843137254902	84.15542242875539	284	0.9366197183098591	0.7495590828924162	44	0	methylated (>=50%)	Q17QZ7	Tetratricopeptide repeat protein 27 (TPR repeat protein 27)	NA	hit, no GO BP
GN018032	Chromosome_3A	3631	3	101	36.876893417791244	0.8202291169024039	1.1297071129707112	101	0	1.4625228519195612	18	0	1.0866997401370186	83	0	19.205751454981172	51	0.19607843137254902	unmethylated (<10%)	Q8K5B2	Multiple coagulation factor deficiency protein 2 homolog (Neural stem cell-derived neuronal survival protein)	gene expression [GO:0010467]	hit with GO BP
GN018062	Chromosome_3A	4177	3	133	41.72851328704812	0.7317394751885522	1.6112531969309463	122	0	2.0554066130473636	34	0	1.4331780723754926	88	0	17.527272727272727	34	0.17647058823529413	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018063	Chromosome_3A	222	1	1	40.990990990990994	0.10735009671179883	NA	0	NA	NA	NA	NA	NA	NA	NA	1.823949246629659	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018064	Chromosome_3A	387	1	27	43.92764857881137	1.447029497299543	3.3333333333333335	23	0	3.3333333333333335	23	0	NA	NA	NA	0.4459308807134894	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018065	Chromosome_3A	13248	3	512	38.39824879227053	1.0488691563957122	1.3666421748714181	458	0	0.6405124099279423	28	0	1.4139622247730357	430	0	0.6756756756756757	66	0	unmethylated (<10%)	Q90W04	Neuroglobin (Nitrite reductase) (EC 1.7.-.-)	cellular response to hypoxia [GO:0071456]	hit with GO BP
GN018066	Chromosome_3A	195	1	15	47.69230769230769	1.3995215311004785	1.3953488372093024	15	0	1.3953488372093024	15	0	NA	NA	NA	0.5089058524173028	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018067	Chromosome_3A	993	1	57	45.51863041289023	1.1087148145971675	0.6105006105006106	56	0	0.6105006105006106	56	0	NA	NA	NA	0.6361708573159649	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018068	Chromosome_3A	5104	5	162	36.50078369905956	0.9529279974921977	2.3909674562762895	162	0	0.561070349589987	41	0	3.022182521959208	121	0	0.4809470958194599	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018069	Chromosome_3A	642	1	28	42.679127725856695	0.9855263157894737	0.3246753246753247	28	0	0.3246753246753247	28	0	NA	NA	NA	0.6036217303822937	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018070	Chromosome_3A	12702	8	161	35.67154778774996	0.3991705929405537	76.33789849234664	160	0.8875	78.89830508474576	22	0.8636363636363636	75.93554401385005	138	0.8913043478260869	59.71479500891265	46	0.6739130434782609	methylated (>=50%)	P77851	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)	butyrate metabolic process [GO:0019605]; fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN018071	Chromosome_3A	6806	3	171	36.115192477225975	0.7711460784937345	0.9461209042924011	171	0	0.5892255892255892	55	0	1.0567514677103718	116	0	0.6671608598962194	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018072	Chromosome_3A	465	1	1	41.72043010752688	0.05118326912493121	0	1	0	0	1	0	NA	NA	NA	0.8932559178204555	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018073	Chromosome_3A	612	1	27	46.24183006535948	0.8257871064467767	0.6180469715698393	27	0	0.6180469715698393	27	0	NA	NA	NA	0.5574136008918618	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018076	Chromosome_3A	6657	2	195	37.14886585549046	0.84926713038563	0.7109807019523756	195	0	1.2987012987012987	23	0	0.667070952092177	172	0	1.3758389261744965	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018075	Chromosome_3A	2839	3	101	38.25290595280028	0.9727055311498211	0.5908720456397718	101	0	0.5376344086021505	21	0	0.6003842459173871	80	0	3.027754415475189	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018077	Chromosome_3A	4489	4	66	42.01381153931833	0.3423023732197386	93.79220779220779	62	0.9838709677419355	95.99618684461392	21	1	92.9667975722956	41	0.975609756097561	23.631680618158402	34	0.20588235294117646	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018078	Chromosome_3A	5044	4	185	39.452815226011104	0.94474046820914	0.654606046179481	185	0	0.44608223429014743	96	0	0.9858287122612446	89	0	3.1587697423108896	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018085	Chromosome_3A	468	1	20	42.30769230769231	0.9585253456221198	0.42337002540220153	20	0	0.42337002540220153	20	0	NA	NA	NA	0.713436385255648	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018084	Chromosome_3A	513	1	6	42.10526315789474	0.27882960413080893	80.37037037037037	6	1	80.37037037037037	6	1	NA	NA	NA	81.49127445795875	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016047	Chromosome_3A	417	1	2	43.645083932853716	0.10090744101633393	NA	0	NA	NA	NA	NA	NA	NA	NA	94.19942473633749	33	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018083	Chromosome_3A	288	1	14	44.44444444444444	0.9865426963542941	6.099290780141844	14	0	6.099290780141844	14	0	NA	NA	NA	68.13070231275196	78	0.5897435897435898	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018094	Chromosome_3A	5492	7	184	37.94610342316096	0.9308748968282042	0.5300713557594292	182	0	0.4639175257731959	49	0	0.5463786531130876	133	0	1.4002333722287048	55	0	unmethylated (<10%)	P49900	Arginase, hepatic (EC 3.5.3.1)	arginine metabolic process [GO:0006525]; urea cycle [GO:0000050]	hit with GO BP
GN018093	Chromosome_3A	30797	14	319	35.73724713446115	0.3245236781470685	89.24100337229177	316	0.9936708860759493	92.9016620498615	46	1	88.67743483128099	270	0.9925925925925926	90.94608341810783	41	1	methylated (>=50%)	Q76MT4	ESF1 homolog (ABT1-associated protein)	rRNA processing [GO:0006364]	hit with GO BP
GN018092	Chromosome_3A	16898	10	381	36.24689312344656	0.6868443220379487	90.63046010483401	375	0.9706666666666667	90.16751638747269	58	0.9827586206896551	90.68187333171561	317	0.9684542586750788	57.80943025540275	59	0.6440677966101694	methylated (>=50%)	Q96CN9	GRIP and coiled-coil domain-containing protein 1 (Golgi coiled-coil protein 1)	NA	hit, no GO BP
GN018091	Chromosome_3A	717	3	24	40.306834030683405	0.8410557184750733	0.6683375104427736	24	0	0.4784688995215311	18	0	1.10803324099723	6	0	0.5502567865003668	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018090	Chromosome_3A	2692	2	69	39.37592867756315	0.6676875296553509	45.65128623928134	69	0.3333333333333333	8.415841584158416	26	0.038461538461538464	53.007334963325185	43	0.5116279069767442	1.3391362571141614	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018089	Chromosome_3A	678	1	26	43.657817109144545	0.8265191297824456	0.4491017964071856	26	0	0.4491017964071856	26	0	NA	NA	NA	0.5520794994479205	44	0	unmethylated (<10%)	Q6AY25	Transmembrane emp24 domain-containing protein 3 (p24 family protein gamma-4) (p24gamma4)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]	hit with GO BP
GN018088	Chromosome_3A	1395	1	64	44.157706093189965	0.9451219512195121	0.5599104143337066	64	0	0.5599104143337066	64	0	NA	NA	NA	0.5289139633286318	55	0	unmethylated (<10%)	Q5D0K2	Cholecystokinin receptor type A (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R)	cellular response to hormone stimulus [GO:0032870]; G protein-coupled receptor signaling pathway [GO:0007186]; regulation of hormone secretion [GO:0046883]	hit with GO BP
GN018087	Chromosome_3A	20041	12	436	34.46933785739235	0.737336666387637	0.9331817909912066	380	0	0.5685218432076601	72	0	1.0242990654205608	308	0	0.5787037037037037	56	0	unmethylated (<10%)	P36573	32 kDa beta-galactoside-binding lectin (32 kDa GBP)	NA	hit, no GO BP
GN018098	Chromosome_3A	237	1	5	49.78902953586498	0.34852941176470587	NA	0	NA	NA	NA	NA	NA	NA	NA	97.17171717171718	29	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018099	Chromosome_3A	282	1	5	52.4822695035461	0.2756598240469208	NA	0	NA	NA	NA	NA	NA	NA	NA	95.85365853658537	11	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018100	Chromosome_3A	237	1	5	49.78902953586498	0.34852941176470587	NA	0	NA	NA	NA	NA	NA	NA	NA	96.7032967032967	4	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018097	Chromosome_3A	504	1	11	49.404761904761905	0.37333333333333335	90.9090909090909	2	1	90.9090909090909	2	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018096	Chromosome_3A	37765	24	502	34.86561631139944	0.43859475001203024	83.12625616663621	497	0.9517102615694165	89.65132940614552	117	0.9914529914529915	81.58301012915615	380	0.9394736842105263	82.74509803921569	15	1	methylated (>=50%)	A1Z877	Nidogen (Entactin)	basement membrane assembly involved in embryonic body morphogenesis [GO:2001197]; basement membrane organization [GO:0071711]; cell-matrix adhesion [GO:0007160]; regulation of basement membrane organization [GO:0110011]	hit with GO BP
GN018095	Chromosome_3A	4739	3	126	37.79278328761342	0.7453601761560239	0.9776536312849162	126	0	0.5422153369481022	33	0	1.0867455850960606	93	0	0.7506702412868632	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018108	Chromosome_3A	808	2	25	38.49009900990099	0.8399866932801064	94.93374902572097	25	1	94.07894736842105	20	1	97.03504043126685	5	1	90.46474358974359	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018107	Chromosome_3A	2452	4	47	37.35725938009788	0.558669400774664	88.11706629055007	47	1	95.7841483979764	13	1	86.09005795809185	34	1	95.20264681555004	44	1	methylated (>=50%)	Q5R5C9	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN018106	Chromosome_3A	2749	3	33	32.77555474718079	0.447234273318872	63.82454411039921	33	0.5757575757575758	41.91616766467066	11	0.36363636363636365	68.14159292035399	22	0.6818181818181818	6.006742261722342	52	0.038461538461538464	methylated (>=50%)	Q8R127	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN018105	Chromosome_3A	3992	4	58	36.322645290581164	0.44286326355735095	81.86516326051209	58	0.896551724137931	96.62921348314607	12	1	80.14165792235048	46	0.8695652173913043	31.244813278008298	28	0.39285714285714285	methylated (>=50%)	Q32P73	DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (DNA-directed RNA polymerase II subunit I)	maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II [GO:0001193]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN018104	Chromosome_3A	1977	1	27	42.43803743045018	0.30419891265942534	88.2414151925078	27	1	88.2414151925078	27	1	NA	NA	NA	87.43109151047409	12	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018103	Chromosome_3A	3254	6	49	36.93915181315304	0.45702247191011236	62.452107279693486	49	0.5510204081632653	78.5063752276867	22	0.8181818181818182	50.79365079365079	27	0.3333333333333333	15.39313399778516	50	0.14	methylated (>=50%)	C3XR70	Enolase-phosphatase E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane phosphatase)	NA	hit, no GO BP
GN018102	Chromosome_3A	44582	37	808	36.48109102328294	0.546799002763014	88.34956769180256	802	0.9825436408977556	94.66463414634147	172	0.9941860465116279	87.29073482428115	630	0.9793650793650793	88.687097994703	36	1	methylated (>=50%)	E9PSU6	Pecanex-like protein 1 (Pecanex 1) (Pecanex homolog protein 1)	NA	hit, no GO BP
GN018101	Chromosome_3A	1472	2	63	45.17663043478261	0.8401978726874083	0.6410256410256411	63	0	0.7908611599297012	50	0	0	13	0	0.5129849310676499	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018166	Chromosome_3A	39531	29	509	36.83944246287724	0.37981925452486615	90.74734352384651	508	0.9803149606299213	91.68846850472933	131	0.9770992366412213	90.54713588492166	377	0.9814323607427056	55.54016620498615	49	0.5510204081632653	methylated (>=50%)	Q86X10	Ral GTPase-activating protein subunit beta (p170)	activation of GTPase activity [GO:0090630]; Ral protein signal transduction [GO:0032484]; regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN018165	Chromosome_3A	418	2	3	35.88516746411483	0.23500749625187406	56.89655172413793	3	0.6666666666666666	56.89655172413793	3	0.6666666666666666	NA	NA	NA	78.29068847269849	60	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018164	Chromosome_3A	786	1	7	37.531806615776084	0.2535483870967742	52.67605633802817	7	0.7142857142857143	52.67605633802817	7	0.7142857142857143	NA	NA	NA	52.72331154684096	17	0.4117647058823529	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018163	Chromosome_3A	381	1	2	38.05774278215223	0.14580941446613088	41.935483870967744	2	0.5	41.935483870967744	2	0.5	NA	NA	NA	67.07964601769912	36	0.8611111111111112	NA	NA	NA	NA	no Swiss-Prot hit
GN018162	Chromosome_3A	11080	11	161	35.90252707581227	0.4509716134215551	86.84677578386906	161	0.9627329192546584	93.94639556377079	50	1	84.92103284031086	111	0.9459459459459459	44.318444804443416	55	0.509090909090909	methylated (>=50%)	P15330	Embryonic polarity protein dorsal	canonical NF-kappaB signal transduction [GO:0007249]; dorsal/ventral axis specification [GO:0009950]; dorsal/ventral pattern formation [GO:0009953]; immune response [GO:0006955]; inflammatory response [GO:0006954]; innate immune response [GO:0045087]; melanization defense response [GO:0035006]; non-canonical NF-kappaB signal transduction [GO:0038061]; peripheral nervous system neuron development [GO:0048935]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte differentiation [GO:0045612]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of hemocyte proliferation [GO:0035206]; response to cytokine [GO:0034097]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN018161	Chromosome_3A	1137	1	22	42.74406332453826	0.4240739170975672	93.38654503990878	22	1	93.38654503990878	22	1	NA	NA	NA	79.6742671009772	35	1	methylated (>=50%)	Q86W34	Archaemetzincin-2 (EC 3.4.-.-) (Archeobacterial metalloproteinase-like protein 2)	proteolysis [GO:0006508]	hit with GO BP
GN018160	Chromosome_3A	26074	16	262	34.98120733297538	0.328760021894915	78.96738335527279	259	0.9498069498069498	84.73421172194458	53	1	77.86106510938725	206	0.9368932038834952	65.18733273862622	70	0.7285714285714285	methylated (>=50%)	Q96M60	Protein FAM227B	NA	hit, no GO BP
GN018159	Chromosome_3A	1859	8	69	43.51802044109736	0.7884381338742393	7.502246181491465	69	0.028985507246376812	6.666666666666667	46	0	8.98876404494382	23	0.08695652173913043	1.7587055926837847	75	0	unmethylated (<10%)	O02467	N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC 3.5.1.26) (Aspartylglucosaminidase) (AGA) (Glycosylasparaginase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) [Cleaved into: Glycosylasparaginase alpha chain; Glycosylasparaginase beta chain]	NA	hit, no GO BP
GN018158	Chromosome_3A	25531	18	347	35.07109004739336	0.4457945368983785	83.96601941747574	344	0.9273255813953488	90.76106194690266	71	1	82.88607594936708	273	0.9084249084249084	80.43668122270742	31	1	methylated (>=50%)	P08478	Peptidyl-glycine alpha-amidating monooxygenase A (PAM-A) (Peptide C-terminal alpha-amidating enzyme I) (AE-I) (Peptidyl-glycine alpha-amidating monooxygenase I) [Includes: Peptidylglycine alpha-hydroxylating monooxygenase A (PHM-A) (EC 1.14.17.3); Peptidyl-alpha-hydroxyglycine alpha-amidating lyase A (EC 4.3.2.5) (Peptidylamidoglycolate lyase-A) (PAL-A)]	peptide amidation [GO:0001519]	hit with GO BP
GN018157	Chromosome_3A	231	1	7	49.35064935064935	0.5015508684863523	0.9615384615384616	7	0	0.9615384615384616	7	0	NA	NA	NA	0.8397932816537468	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018156	Chromosome_3A	5720	2	238	39.09090909090909	1.0898378084121876	1.0531135531135531	238	0	0.9534492428491307	59	0	1.0786710772328492	179	0	0.5466347796378545	60	0	unmethylated (<10%)	Q6VV64	Potassium channel subfamily K member 18 (Two-pore-domain potassium channel TRESK)	cellular response to pH [GO:0071467]; potassium ion export across plasma membrane [GO:0097623]; potassium ion transport [GO:0006813]; regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation [GO:0032829]	hit with GO BP
GN018155	Chromosome_3A	17467	15	233	34.78559569473865	0.440978610568982	79.85237834882449	217	0.9262672811059908	74.84524479459763	36	0.8611111111111112	80.54453520031116	181	0.9392265193370166	34.323116219667945	47	0.40425531914893614	methylated (>=50%)	Q3V3N7	BBSome complex member BBS1 (Bardet-Biedl syndrome 1 protein homolog)	adult behavior [GO:0030534]; brain morphogenesis [GO:0048854]; cartilage development [GO:0051216]; cerebral cortex development [GO:0021987]; cilium assembly [GO:0060271]; dendrite development [GO:0016358]; fat cell differentiation [GO:0045444]; fertilization [GO:0009566]; Golgi to plasma membrane protein transport [GO:0043001]; hippocampus development [GO:0021766]; hormone metabolic process [GO:0042445]; intracellular protein localization [GO:0008104]; intraciliary retrograde transport [GO:0035721]; lipid metabolic process [GO:0006629]; microtubule cytoskeleton organization [GO:0000226]; neural precursor cell proliferation [GO:0061351]; neuron migration [GO:0001764]; non-motile cilium assembly [GO:1905515]; olfactory behavior [GO:0042048]; photoreceptor cell maintenance [GO:0045494]; photoreceptor cell morphogenesis [GO:0008594]; protein localization to cilium [GO:0061512]; regulation of cilium beat frequency involved in ciliary motility [GO:0060296]; response to endoplasmic reticulum stress [GO:0034976]; retina development in camera-type eye [GO:0060041]; retina homeostasis [GO:0001895]; sensory perception of smell [GO:0007608]; striatum development [GO:0021756]; ventricular system development [GO:0021591]; visual perception [GO:0007601]	hit with GO BP
GN018154	Chromosome_3A	23148	19	251	36.58631415241057	0.3258026794092456	80.90416428978894	248	0.9274193548387096	83.36134453781513	42	0.9285714285714286	80.54579622518179	206	0.9271844660194175	89.95215311004785	41	1	methylated (>=50%)	Q640B4	Structure-specific endonuclease subunit MUS81 (EC 3.1.22.-) (Crossover junction endonuclease MUS81)	DNA catabolic process [GO:0006308]; double-strand break repair via break-induced replication [GO:0000727]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; replication fork processing [GO:0031297]; resolution of meiotic recombination intermediates [GO:0000712]	hit with GO BP
GN018153	Chromosome_3A	4517	7	123	37.05999557228249	0.7931292424750715	0.7523148148148148	123	0	0.5761843790012804	45	0	0.8282716731087797	78	0	0.7899461400359067	35	0	unmethylated (<10%)	P11834	Opioid-binding protein/cell adhesion molecule (OBCAM) (OPCML) (Opioid-binding cell adhesion molecule)	heterophilic cell-cell adhesion [GO:0007157]; regulation of synapse assembly [GO:0051963]	hit with GO BP
GN018152	Chromosome_3A	1276	2	51	38.71473354231975	1.0691859032284565	0.5215879455230368	51	0	0.4420866489832007	21	0	0.5603448275862069	30	0	0.5251312828207052	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018151	Chromosome_3A	291	1	14	46.391752577319586	0.9025254762959681	0	14	0	0	14	0	NA	NA	NA	0.6350267379679144	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011236	Chromosome_3A	282	1	6	41.13475177304964	0.5444015444015444	81.89655172413794	6	1	81.89655172413794	6	1	NA	NA	NA	83.8351822503962	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018150	Chromosome_3A	4899	8	120	35.905286793223105	0.7600769541068049	1.644398766700925	120	0	0.8837525492861998	49	0	1.9740718915733648	71	0	1.1390416339355853	38	0	unmethylated (<10%)	P17538	Chymotrypsinogen B (EC 3.4.21.1) [Cleaved into: Chymotrypsin B chain A; Chymotrypsin B chain B; Chymotrypsin B chain C]	proteolysis [GO:0006508]	hit with GO BP
GN018149	Chromosome_3A	17428	6	215	35.48313059444572	0.393231872285854	74.48543689320388	214	0.8598130841121495	69.51530612244898	52	0.75	75.37792029317453	162	0.8950617283950617	3.438228438228438	72	0	methylated (>=50%)	Q8CG80	SH2 domain-containing adapter protein F	signal transduction [GO:0007165]	hit with GO BP
GN018148	Chromosome_3A	3891	3	127	39.73271652531483	0.8277336683417086	0.9294566253574833	124	0	0.4028197381671702	44	0	1.092725569778333	80	0	22.197962154294032	30	0.23333333333333334	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018147	Chromosome_3A	285	1	10	48.07017543859649	0.6113256113256114	0.6711409395973155	10	0	0.6711409395973155	10	0	NA	NA	NA	0.7008086253369272	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018146	Chromosome_3A	532	2	28	48.49624060150376	0.9058072362420189	0.8733624454148472	27	0	0.8733624454148472	27	0	NA	NA	NA	0.9620523784072689	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018145	Chromosome_3A	3041	5	41	38.572837882275564	0.36411503933742573	91.6156670746634	41	1	93.67088607594937	23	1	89.69194312796209	18	1	41.32124352331606	15	0.4	methylated (>=50%)	Q8HY24	Organic anion transporter 3 (rOAT3) (Organic anion/dicarboxylate exchanger) (Solute carrier family 22 member 8)	prostaglandin transport [GO:0015732]	hit with GO BP
GN018144	Chromosome_3A	1113	2	49	46.45103324348607	0.8309513651877133	1.2690355329949239	41	0	1.342281879194631	20	0	1.2244897959183674	21	0	0.6618705035971223	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018143	Chromosome_3A	1050	1	23	42.476190476190474	0.4864244279729294	90.25974025974025	23	1	90.25974025974025	23	1	NA	NA	NA	80.62893081761007	27	0.9259259259259259	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018142	Chromosome_3A	31065	14	289	34.19925961693224	0.3188493036218426	77.95784224841341	287	0.9233449477351916	90.31612645058023	47	1	75.91920258762954	240	0.9083333333333333	83.3648393194707	22	1	methylated (>=50%)	Q9WV92	Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (DAL1P) (mDAL-1) (Erythrocyte membrane protein band 4.1-like 3) [Cleaved into: Band 4.1-like protein 3, N-terminally processed]	actomyosin structure organization [GO:0031032]; axon development [GO:0061564]; cortical actin cytoskeleton organization [GO:0030866]; cortical cytoskeleton organization [GO:0030865]; myelin maintenance [GO:0043217]; neuron projection morphogenesis [GO:0048812]; paranodal junction assembly [GO:0030913]; paranodal junction maintenance [GO:1990227]; protein localization to juxtaparanode region of axon [GO:0071205]; protein localization to paranode region of axon [GO:0002175]; protein localization to plasma membrane [GO:0072659]; regulation of cell shape [GO:0008360]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]	hit with GO BP
GN018141	Chromosome_3A	2154	1	98	43.129062209842154	0.981558463298273	1.3085690164626425	98	0	1.3085690164626425	98	0	NA	NA	NA	0.6625441696113075	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018140	Chromosome_3A	33639	22	533	35.84827135170487	0.49356799742600976	86.62743900746621	533	0.9174484052532833	74.86644619689646	78	0.8333333333333334	88.06779238581844	455	0.9318681318681319	73.86734324030446	36	0.8333333333333334	methylated (>=50%)	Q13033	Striatin-3 (Cell cycle autoantigen SG2NA) (S/G2 antigen)	negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of hippo signaling [GO:0035331]; negative regulation of intracellular estrogen receptor signaling pathway [GO:0033147]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of hippo signaling [GO:0035330]; response to estradiol [GO:0032355]	hit with GO BP
GN018139	Chromosome_3A	30323	32	518	35.45823302443689	0.5449369922910321	88.2390584569155	512	0.970703125	91.62962962962963	70	0.9571428571428572	87.80847260982722	442	0.9728506787330317	40.23261961406291	58	0.3620689655172414	methylated (>=50%)	Q7TPD0	Integrator complex subunit 3 (Int3) (SOSS complex subunit A) (Sensor of single-strand DNA complex subunit A) (SOSS-A) (Sensor of ssDNA subunit A)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; mitotic G2/M transition checkpoint [GO:0044818]; regulation of transcription elongation by RNA polymerase II [GO:0034243]; response to ionizing radiation [GO:0010212]; RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA processing [GO:0016180]	hit with GO BP
GN018137	Chromosome_3A	282	1	8	41.48936170212766	0.7089880578252671	95.1417004048583	8	1	95.1417004048583	8	1	NA	NA	NA	88.88888888888889	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018136	Chromosome_3A	1041	1	30	46.3016330451489	0.5430832101556387	45.599654874892146	30	0.5	45.599654874892146	30	0.5	NA	NA	NA	71.4416896235078	32	0.84375	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018135	Chromosome_3A	384	1	14	51.302083333333336	0.5663716814159292	94.24657534246575	14	1	94.24657534246575	14	1	NA	NA	NA	47.82485072504976	39	0.5384615384615384	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018132	Chromosome_3A	1979	4	20	35.11874684183931	0.34492374727668845	79.50160771704181	20	0.95	79.94011976047904	5	0.8	79.34065934065934	15	1	61.76470588235294	38	0.5789473684210527	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018131	Chromosome_3A	8729	7	110	35.536716691488145	0.40131572073116956	92.6725448464579	110	0.990909090909091	87.37201365187714	13	0.9230769230769231	93.4900859799965	97	1	89.33459178857952	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018130	Chromosome_3A	20059	10	312	34.76245077022783	0.5148545346941455	89.09940077546705	308	0.9935064935064936	95.08599508599508	36	1	88.50975267412032	272	0.9926470588235294	93.0698580573337	54	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018129	Chromosome_3A	300	1	1	41	0.08818342151675485	0	1	0	0	1	0	NA	NA	NA	0.2898550724637681	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018128	Chromosome_3A	16569	7	264	35.05341300018106	0.5188819085939872	73.94261318506751	262	0.9236641221374046	82.89017341040463	19	0.9473684210526315	73.54115877379532	243	0.9218106995884774	22.63681592039801	51	0.3137254901960784	methylated (>=50%)	A6H8Z2	Protein FAM221B	NA	hit, no GO BP
GN018127	Chromosome_3A	19455	9	475	34.53096890259573	0.8240915229497601	85.55206571635661	329	0.9179331306990881	67.67908309455588	21	0.6666666666666666	87.19788918205805	308	0.935064935064935	60.19076305220884	52	0.75	methylated (>=50%)	Q7SXU0	Eukaryotic translation initiation factor 3 subunit J-A (eIF3j-A) (Eukaryotic translation initiation factor 3 subunit 1-A) (eIF-3-alpha-A) (eIF3 p35-A)	formation of cytoplasmic translation initiation complex [GO:0001732]	hit with GO BP
GN018126	Chromosome_3A	576	1	20	46.18055555555556	0.6530612244897959	1.5	20	0	1.5	20	0	NA	NA	NA	45.714285714285715	29	0.4482758620689655	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018125	Chromosome_3A	8452	8	224	36.20444865120682	0.8091456959557844	0.9081473793461339	223	0	0.6875477463712758	57	0	0.9727191413237924	166	0	0.7120743034055728	52	0	unmethylated (<10%)	Q5EA79	Galactose mutarotase (EC 5.1.3.3) (Aldose 1-epimerase)	galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; glucose metabolic process [GO:0006006]	hit with GO BP
GN018124	Chromosome_3A	396	1	21	51.26262626262626	0.8143360752056404	0.14749262536873156	21	0	0.14749262536873156	21	0	NA	NA	NA	1.6455998092058193	61	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN018123	Chromosome_3A	2072	6	75	37.64478764478765	1.0241269548369238	0.5530317993284614	75	0	0.5483870967741935	48	0	0.5603667855323484	27	0	0.5383153894870171	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018122	Chromosome_3A	1788	1	77	42.84116331096197	0.9393319141968233	1.1147540983606556	63	0	1.1147540983606556	63	0	NA	NA	NA	3.7547169811320753	64	0	unmethylated (<10%)	Q6R5J2	Protein dispatched homolog 1 (Protein chameleon)	adenohypophysis development [GO:0021984]; animal organ morphogenesis [GO:0009887]; anterior/posterior pattern specification [GO:0009952]; blood circulation [GO:0008015]; embryonic cranial skeleton morphogenesis [GO:0048701]; inner ear development [GO:0048839]; muscle cell fate specification [GO:0042694]; retinal ganglion cell axon guidance [GO:0031290]; skeletal muscle tissue development [GO:0007519]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN018121	Chromosome_3A	243	1	9	41.97530864197531	0.8411538461538461	0.6430868167202572	9	0	0.6430868167202572	9	0	NA	NA	NA	0.8375209380234506	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018120	Chromosome_3A	10667	6	334	38.48317240086247	0.8457159432729704	0.6245316012990257	277	0	0.7666506947771922	84	0	0.5946381777867366	193	0	1.090289608177172	60	0	unmethylated (<10%)	Q6R5J2	Protein dispatched homolog 1 (Protein chameleon)	adenohypophysis development [GO:0021984]; animal organ morphogenesis [GO:0009887]; anterior/posterior pattern specification [GO:0009952]; blood circulation [GO:0008015]; embryonic cranial skeleton morphogenesis [GO:0048701]; inner ear development [GO:0048839]; muscle cell fate specification [GO:0042694]; retinal ganglion cell axon guidance [GO:0031290]; skeletal muscle tissue development [GO:0007519]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN018119	Chromosome_3A	703	3	19	42.53200568990043	0.5984318996415771	29.250185597624352	19	0	29.43548387096774	17	0	27.102803738317757	2	0	4.283426741393114	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018118	Chromosome_3A	333	1	9	52.252252252252255	0.3964285714285714	0	9	0	0	9	0	NA	NA	NA	1.3726281792490918	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018117	Chromosome_3A	960	1	38	55.416666666666664	0.5156912637828668	92.85714285714286	5	1	92.85714285714286	5	1	NA	NA	NA	8.411025537089582	60	0.18333333333333332	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018116	Chromosome_3A	1863	1	85	44.22973698336017	0.9389285820165426	1.1378555798687089	85	0	1.1378555798687089	85	0	NA	NA	NA	0.44699872286079184	37	0	unmethylated (<10%)	Q14624	Inter-alpha-trypsin inhibitor heavy chain H4 (ITI heavy chain H4) (ITI-HC4) (Inter-alpha-inhibitor heavy chain 4) (Inter-alpha-trypsin inhibitor family heavy chain-related protein) (IHRP) (Plasma kallikrein sensitive glycoprotein 120) (Gp120) (PK-120) [Cleaved into: 70 kDa inter-alpha-trypsin inhibitor heavy chain H4; 35 kDa inter-alpha-trypsin inhibitor heavy chain H4]	acute-phase response [GO:0006953]; hyaluronan metabolic process [GO:0030212]; response to cytokine [GO:0034097]	hit with GO BP
GN018115	Chromosome_3A	4203	4	116	36.49773970973114	0.8295681735813228	0.5543633762517882	114	0	0.6937561942517344	47	0	0.4756575265808618	67	0	0.34093889325990034	54	0	unmethylated (<10%)	Q61670	H2.0-like homeobox protein (Homeobox protein HLX1)	animal organ development [GO:0048513]; embryonic digestive tract morphogenesis [GO:0048557]; enteric nervous system development [GO:0048484]; liver development [GO:0001889]; negative regulation of T-helper 2 cell differentiation [GO:0045629]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of organ growth [GO:0046622]; positive regulation of T-helper 1 cell differentiation [GO:0045627]; skeletal muscle tissue development [GO:0007519]	hit with GO BP
GN018114	Chromosome_3A	933	1	29	41.58628081457663	0.7768972349039538	1.9039376893119861	29	0	1.9039376893119861	29	0	NA	NA	NA	1.3169446883230904	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018113	Chromosome_3A	3642	8	78	36.02416254805052	0.665147850437967	1.8949181739879415	78	0	0.5208333333333334	44	0	2.9789419619928093	34	0	1.07393638992152	80	0	unmethylated (<10%)	Q66HG4	Galactose mutarotase (EC 5.1.3.3) (Aldose 1-epimerase)	carbohydrate metabolic process [GO:0005975]; galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; galactose metabolic process [GO:0006012]; glucose metabolic process [GO:0006006]	hit with GO BP
GN018112	Chromosome_3A	4128	8	99	37.185077519379846	0.6947321179646542	0.5120126033871603	93	0	0.2544529262086514	29	0	0.5898948448320082	64	0	0.3768413840356286	35	0	unmethylated (<10%)	Q8K157	Galactose mutarotase (EC 5.1.3.3) (Aldose 1-epimerase)	carbohydrate metabolic process [GO:0005975]; galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; galactose metabolic process [GO:0006012]; glucose metabolic process [GO:0006006]	hit with GO BP
GN018111	Chromosome_3A	2379	3	79	40.39512400168138	0.8156524229877874	0.5660911406736484	78	0	0.5027230833682447	62	0	0.6980802792321117	16	0	0.6477329347284504	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018201	Chromosome_3A	61531	21	996	34.741837447790545	0.5377983259831594	63.247022135882624	911	0.7014270032930845	93.08462238398545	64	1	61.93443366645763	847	0.6788665879574971	34.61321287408244	27	0.37037037037037035	methylated (>=50%)	Q803R5	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap methyltransferase 1) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (FtsJ methyltransferase domain-containing protein 2)	7-methylguanosine mRNA capping [GO:0006370]; mRNA processing [GO:0006397]	hit with GO BP
GN018200	Chromosome_3A	1350	1	29	38.074074074074076	0.5971173644474949	51.16673737802291	28	0.5714285714285714	51.16673737802291	28	0.5714285714285714	NA	NA	NA	87.51537515375153	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018199	Chromosome_3A	48734	12	897	37.62465629745147	0.5201069711118033	58.42489906475188	681	0.5301027900146843	91.928632115548	49	0.9795918367346939	56.280587275693314	632	0.495253164556962	40.32042723631508	33	0.3333333333333333	methylated (>=50%)	P36993	Protein phosphatase 1B (EC 3.1.3.16) (Protein phosphatase 2C isoform beta) (PP2C-beta)	N-terminal protein myristoylation [GO:0006499]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of defense response to virus [GO:0050687]; negative regulation of interferon-beta production [GO:0032688]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; peptidyl-threonine dephosphorylation [GO:0035970]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; protein dephosphorylation [GO:0006470]; regulation of canonical NF-kappaB signal transduction [GO:0043122]	hit with GO BP
GN018198	Chromosome_3A	5408	3	89	34.5414201183432	0.5525589511629508	37.84502146800245	89	0.4044943820224719	65.32663316582915	15	0.6	34.0242198416395	74	0.36486486486486486	44.67213114754098	39	0.3076923076923077	sparse (10-50%)	Q96FN9	D-aminoacyl-tRNA deacylase 2 (EC 3.1.1.96) (Animalia-specific tRNA deacylase) (ATD) (D-tyrosyl-tRNA(Tyr) deacylase 2) (L-alanyl-tRNA deacylase)	aminoacyl-tRNA metabolism involved in translational fidelity [GO:0106074]; tRNA metabolic process [GO:0006399]	hit with GO BP
GN018197	Chromosome_3A	19328	14	231	34.049048013245034	0.4224472405523494	79.08156542363947	231	0.7965367965367965	77.96014067995311	47	0.7872340425531915	79.30897852444726	184	0.7989130434782609	0.3775620280474649	52	0	methylated (>=50%)	P53042	Serine/threonine-protein phosphatase 5 (PP5) (EC 3.1.3.16) (Protein phosphatase T) (PPT)	cellular response to cadmium ion [GO:0071276]; cellular response to hydrogen peroxide [GO:0070301]; negative regulation of apoptotic process [GO:0043066]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of protein phosphorylation [GO:0001933]; peptidyl-serine dephosphorylation [GO:0070262]; positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway [GO:2000324]; protein dephosphorylation [GO:0006470]; response to arachidonate [GO:1904550]; response to lead ion [GO:0010288]; response to morphine [GO:0043278]	hit with GO BP
GN018196	Chromosome_3A	624	1	19	43.75	0.6557522123893805	2.272727272727273	19	0	2.272727272727273	19	0	NA	NA	NA	15.320121951219512	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018195	Chromosome_3A	64154	46	733	35.86682046326028	0.3553615609486733	80.96711701512064	713	0.9032258064516129	88.76230661040788	164	0.9695121951219512	79.26892790391274	549	0.8834244080145719	2.726063829787234	76	0	methylated (>=50%)	Q9U1M8	Myosin-I heavy chain (Class VII unconventional myosin) (DdMVII) (DdM7)	actin filament-based movement [GO:0030048]; cell morphogenesis [GO:0000902]; cell-substrate adhesion [GO:0031589]; endocytosis [GO:0006897]; filopodium assembly [GO:0046847]; phagocytosis [GO:0006909]; response to calcium ion [GO:0051592]; spore germination [GO:0009847]	hit with GO BP
GN018194	Chromosome_3A	717	1	29	42.25941422594142	0.9071197975743827	2.753441802252816	29	0	2.753441802252816	29	0	NA	NA	NA	5.401111993645751	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018193	Chromosome_3A	1057	1	45	48.24976348155156	0.7315891472868217	1.911764705882353	37	0	1.911764705882353	37	0	NA	NA	NA	5.430081691494474	45	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN018192	Chromosome_3A	12117	7	216	38.29330692415614	0.4916139415263731	86.56311817715583	216	0.8703703703703703	88.26923076923077	121	0.859504132231405	85.33232437886241	95	0.8842105263157894	2.61030261030261	88	0	methylated (>=50%)	Q5VUA4	Zinc finger protein 318 (Endocrine regulatory protein)	negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN018191	Chromosome_3A	270	1	4	41.48148148148148	0.34838709677419355	4.382470119521912	4	0	4.382470119521912	4	0	NA	NA	NA	0.9857612267250822	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018190	Chromosome_3A	1569	1	88	46.845124282982795	1.0289598020657893	40.105540897097626	88	0.38636363636363635	40.105540897097626	88	0.38636363636363635	NA	NA	NA	8.839578028373953	61	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018189	Chromosome_3A	839	4	23	39.094159713945174	0.7252602698537979	0.7021063189568706	23	0	0.5128205128205128	14	0	0.970873786407767	9	0	0.8035062089116143	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018188	Chromosome_3A	702	1	37	47.15099715099715	0.9497586660816147	0.6479481641468683	37	0	0.6479481641468683	37	0	NA	NA	NA	0.6121714079942384	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018187	Chromosome_3A	3846	5	119	39.339573582943316	0.8021347073978653	0.5498625343664084	118	0	0.6232686980609419	52	0	0.5084082909659757	66	0	0.5520504731861199	52	0	unmethylated (<10%)	Q8CFJ7	Methylated amino-acid transporter SLC25A45 (Solute carrier family 25 member 45)	carnitine biosynthetic process [GO:0045329]	hit with GO BP
GN018186	Chromosome_3A	12000	15	135	35.583333333333336	0.35574145852680433	83.2372267667963	135	0.9629629629629629	84.90136570561457	30	1	82.87994787424662	105	0.9523809523809523	NA	NA	NA	methylated (>=50%)	O14678	Lysosomal cobalamin transporter ABCD4 (EC 7.6.2.8) (ATP-binding cassette sub-family D member 4) (PMP70-related protein) (P70R) (Peroxisomal membrane protein 1-like) (PXMP1-L) (Peroxisomal membrane protein 69) (PMP69)	cobalamin metabolic process [GO:0009235]; cobalamin transport [GO:0015889]; long-chain fatty acid import into peroxisome [GO:0015910]; peroxisome organization [GO:0007031]; transmembrane transport [GO:0055085]; very long-chain fatty acid catabolic process [GO:0042760]	hit with GO BP
GN018185	Chromosome_3A	35483	19	354	34.664487219231745	0.33318874178535784	80.07333362433978	337	0.9436201780415431	80.64660978895375	44	0.9318181818181818	80.01160429358863	293	0.9453924914675768	0.35816618911174786	68	0	methylated (>=50%)	Q5ZL12	Protein phosphatase 1 regulatory subunit 21 (Coiled-coil domain-containing protein 128) (Ferry endosomal RAB5 effector complex subunit 2) (Fy-2) (KLRAQ motif-containing protein 1)	NA	hit, no GO BP
GN018184	Chromosome_3A	8531	11	115	36.44355878560544	0.4074024396017106	85.96026490066225	115	0.9826086956521739	83.5727969348659	38	0.9736842105263158	87.01933290843425	77	0.987012987012987	57.13673381911702	42	0.5476190476190477	methylated (>=50%)	Q54P77	Probable 4-coumarate--CoA ligase 1 (4CL 1) (EC 6.2.1.12) (4-coumaroyl-CoA synthase 1)	NA	hit, no GO BP
GN018183	Chromosome_3A	21895	3	342	35.43731445535511	0.49859771079283277	78.26937285410057	341	0.9266862170087976	89.51310861423221	11	1	78.00222469410456	330	0.9242424242424242	87.72526351581095	34	0.9705882352941176	methylated (>=50%)	Q96FW1	Ubiquitin thioesterase OTUB1 (EC 3.4.19.12) (Deubiquitinating enzyme OTUB1) (OTU domain-containing ubiquitin aldehyde-binding protein 1) (Otubain-1) (hOTU1) (Ubiquitin-specific-processing protease OTUB1)	DNA damage response [GO:0006974]; negative regulation of double-strand break repair [GO:2000780]; positive regulation of TORC1 signaling [GO:1904263]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]	hit with GO BP
GN018182	Chromosome_3A	16099	4	414	34.188458910491335	0.8801376741576906	2.6182171398295733	398	0	0.40404040404040403	43	0	2.830325608399052	355	0	0.7447125409591897	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018181	Chromosome_3A	1536	1	39	40.234375	0.6370258515265268	16.111328890631125	39	0.10256410256410256	16.111328890631125	39	0.10256410256410256	NA	NA	NA	3.0922930542340628	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004854	Chromosome_3A	1361	2	43	54.7391623806025	0.4299873626050667	92.08333333333333	29	1	92.08333333333333	29	1	NA	NA	NA	60.904468825260906	71	0.6197183098591549	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016298	Chromosome_3A	290	2	3	33.44827586206897	0.3789198606271777	29.508196721311474	3	0	29.508196721311474	3	0	NA	NA	NA	5.544475468687675	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018180	Chromosome_3A	717	2	12	44.07252440725244	0.3446701117654128	80.08658008658008	11	1	80.08658008658008	11	1	NA	NA	NA	90.50420168067227	24	1	methylated (>=50%)	P07511	Serine hydroxymethyltransferase, cytosolic (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (L-allo-threonine/L-threonine aldolase SHMT1) (Serine methylase)	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; cellular response to tetrahydrofolate [GO:1904482]; DNA replication [GO:0006260]; dTMP biosynthetic process [GO:0006231]; folic acid metabolic process [GO:0046655]; glycine metabolic process [GO:0006544]; L-serine catabolic process [GO:0006565]; L-serine metabolic process [GO:0006563]; protein homotetramerization [GO:0051289]; purine nucleobase biosynthetic process [GO:0009113]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	hit with GO BP
GN018179	Chromosome_3A	2253	3	24	34.664891256102976	0.35588200450183627	0.440852314474651	24	0	0.38639876352395675	23	0	1.492537313432836	1	0	0.3838771593090211	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018178	Chromosome_3A	615	1	14	42.4390243902439	0.5061728395061729	0	9	0	0	9	0	NA	NA	NA	0.48582995951417	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018177	Chromosome_3A	7748	6	93	35.054207537429015	0.392227348637097	81.73715484096469	92	0.9239130434782609	84.63661453541859	20	0.95	81.0571736785329	72	0.9166666666666666	94.31414356787491	37	1	methylated (>=50%)	O09174	Alpha-methylacyl-CoA racemase (EC 5.1.99.4) (2-methylacyl-CoA racemase)	bile acid biosynthetic process [GO:0006699]; bile acid metabolic process [GO:0008206]; fatty acid metabolic process [GO:0006631]; isoprenoid catabolic process [GO:0008300]	hit with GO BP
GN018176	Chromosome_3A	957	1	3	37.09508881922675	1.3710601719197708	48.96755162241888	3	0.6666666666666666	48.96755162241888	3	0.6666666666666666	NA	NA	NA	1.2418687167356595	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018175	Chromosome_3A	378	1	3	37.83068783068783	0.78099173553719	93.2975871313673	3	1	93.2975871313673	3	1	NA	NA	NA	28.29367382472432	33	0.30303030303030304	NA	NA	NA	NA	no Swiss-Prot hit
GN018174	Chromosome_3A	34241	13	508	34.642679828276044	0.49537355156497054	81.14283998438579	508	0.8582677165354331	56.67870036101083	61	0.6557377049180327	83.12236286919831	447	0.8859060402684564	0.43600124571784493	51	0	methylated (>=50%)	Q6UUV9	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1) (Transducer of regulated cAMP response element-binding protein 1) (TORC-1) (Transducer of CREB protein 1)	cellular response to cAMP [GO:0071320]; entrainment of circadian clock by photoperiod [GO:0043153]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein homotetramerization [GO:0051289]	hit with GO BP
GN018170	Chromosome_3A	5303	7	60	33.99962285498774	0.3924223924223924	93.27309236947791	60	1	93.08943089430895	15	1	93.33333333333333	45	1	4.399603043334436	47	0.06382978723404255	methylated (>=50%)	Q5RFR8	Coatomer subunit epsilon (Epsilon-coat protein) (Epsilon-COP)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN018169	Chromosome_3A	1305	3	38	43.371647509578544	0.6201230492196879	1.1957205789804908	38	0	1.0401188707280833	15	0	1.3100436681222707	23	0	0.7348938486663038	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018168	Chromosome_3A	345	1	20	51.88405797101449	0.9922346850733391	0.15360983102918588	20	0	0.15360983102918588	20	0	NA	NA	NA	0.6131207847946045	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018167	Chromosome_3A	1554	2	25	38.35263835263835	0.4376034873111885	0.46875	25	0	0.554016620498615	21	0	0	4	0	0.43134435657800146	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018202	Chromosome_3A	832	3	42	46.03365384615385	0.9543369019008084	0.4098360655737705	42	0	0.18587360594795538	33	0	1.0309278350515463	9	0	0.5028735632183908	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018203	Chromosome_3A	243	1	14	49.794238683127574	0.9371900826446281	1.5957446808510638	14	0	1.5957446808510638	14	0	NA	NA	NA	0.49019607843137253	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018204	Chromosome_3A	3566	4	99	36.48345485137409	0.8357931220613929	0.8491182233834096	99	0	1.2244897959183674	13	0	0.8042895442359249	86	0	1.2263668880940215	44	0	unmethylated (<10%)	Q5VWZ2	Lysophospholipase-like protein 1 (EC 3.1.2.22)	negative regulation of cGAS/STING signaling pathway [GO:0160049]; negative regulation of Golgi to plasma membrane protein transport [GO:0042997]	hit with GO BP
GN002811	Chromosome_3A	2389	4	25	35.119296776894096	0.33963991629134255	2.1374045801526718	25	0	1.2922465208747516	18	0	4.934210526315789	7	0	0.8481532147742818	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018205	Chromosome_3A	375	1	8	45.86666666666667	0.41511000415110005	0.7092198581560284	8	0	0.7092198581560284	8	0	NA	NA	NA	2.339986235375086	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018206	Chromosome_3A	2506	3	22	32.60175578611333	0.33046814122160284	2.3587833643699567	22	0	1.694915254237288	14	0	2.962085308056872	8	0	1.4543339150668995	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018207	Chromosome_3A	4300	6	48	35.02325581395349	0.3655633643164815	86.78905687544996	47	1	89.6361631753032	14	1	85.40887226082309	33	1	59.4692400482509	10	0.7	methylated (>=50%)	Q7KN94	Electron transfer flavoprotein subunit alpha, mitochondrial (Alpha-ETF) (Protein walrus)	fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	hit with GO BP
GN018208	Chromosome_3A	28380	21	378	35.78576462297393	0.41604530547235835	86.38706163321741	375	0.9706666666666667	91.84933621488113	67	1	85.52937754508436	308	0.9642857142857143	77.36604907361041	26	1	methylated (>=50%)	Q63415	Proprotein convertase subtilisin/kexin type 6 (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin-like proprotein convertase 4) (SPC4) (Subtilisin/kexin-like protease PACE4)	determination of left/right symmetry [GO:0007368]; glycoprotein metabolic process [GO:0009100]; nerve growth factor production [GO:0032902]; peptide hormone processing [GO:0016486]; protein processing [GO:0016485]; secretion by cell [GO:0032940]; zygotic determination of anterior/posterior axis, embryo [GO:0007354]	hit with GO BP
GN018209	Chromosome_3A	257	1	12	44.747081712062254	0.9413919413919414	0.7017543859649122	12	0	0.7017543859649122	12	0	NA	NA	NA	0.7252946509519492	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018216	Chromosome_3A	813	1	8	36.53136531365314	0.5633119695132514	0.8627450980392157	8	0	0.8627450980392157	8	0	NA	NA	NA	0.5873715124816447	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018215	Chromosome_3A	693	2	16	38.81673881673882	0.6234817813765182	1.4209591474245116	16	0	1.8656716417910448	7	0	1.0169491525423728	9	0	1.0667584308327598	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018214	Chromosome_3A	761	2	14	45.992115637319316	0.35248966087675765	1.7123287671232876	12	0	1.9138755980861244	9	0	1.2048192771084338	3	0	0.6660323501427212	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002879	Chromosome_3A	844	1	38	43.838862559241704	0.9373392564881926	0.8113590263691683	25	0	0.8113590263691683	25	0	NA	NA	NA	8.628996933858957	66	0	unmethylated (<10%)	Q8N8K9	Uncharacterized protein KIAA1958	NA	hit, no GO BP
GN018213	Chromosome_3A	1527	1	39	37.19711853307138	0.7533014571948998	0.9137862534763608	39	0	0.9137862534763608	39	0	NA	NA	NA	2.6518655565834104	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018212	Chromosome_3A	756	1	41	44.17989417989418	1.1292626056543282	0.36036036036036034	40	0	0.36036036036036034	40	0	NA	NA	NA	1.192924722336487	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018211	Chromosome_3A	846	1	28	39.00709219858156	0.8783417998442656	0.2178649237472767	28	0	0.2178649237472767	28	0	NA	NA	NA	1.0514018691588785	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018210	Chromosome_3A	1872	1	59	37.873931623931625	0.8882883752352458	1.2384792626728112	59	0	1.2384792626728112	59	0	NA	NA	NA	0.9550084889643463	53	0	unmethylated (<10%)	E9QHE3	RING finger protein 207	positive regulation of membrane repolarization during cardiac muscle cell action potential [GO:1905033]; positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential [GO:1905026]; regulation of cardiac muscle contraction [GO:0055117]; regulation of heart looping [GO:1901207]	hit with GO BP
GN018220	Chromosome_3A	1785	1	72	41.23249299719888	0.9549497336216313	0.2957121734844751	72	0	0.2957121734844751	72	0	NA	NA	NA	1.475189986589182	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018219	Chromosome_3A	9510	3	274	34.7739221871714	0.9535299864970195	0.648833935239028	274	0	0.3747657713928795	34	0	0.6786102062975027	240	0	0.6655574043261231	70	0	unmethylated (<10%)	Q92048	Protein Wnt-2	canonical Wnt signaling pathway [GO:0060070]; cell fate commitment [GO:0045165]; cell migration involved in gastrulation [GO:0042074]; hepatocyte proliferation [GO:0072574]; liver development [GO:0001889]; neuron differentiation [GO:0030182]; swim bladder development [GO:0048794]	hit with GO BP
GN018218	Chromosome_3A	6201	7	180	35.720045154007416	0.91053257565746	3.3377209477247085	180	0	0.6490872210953347	77	0	4.148818994003182	103	0	7.721843003412969	41	0.04878048780487805	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018217	Chromosome_3A	16254	5	178	35.75735203642181	0.34349226611351014	85.64057525524207	177	0.9887005649717514	92.3406862745098	25	1	84.17814631536713	152	0.9868421052631579	75.38461538461539	22	0.8181818181818182	methylated (>=50%)	Q9NZ43	Vesicle transport protein USE1 (Putative MAPK-activating protein PM26) (USE1-like protein) (p31)	lysosomal transport [GO:0007041]; protein catabolic process [GO:0030163]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; secretion by cell [GO:0032940]	hit with GO BP
GN018246	Chromosome_3A	572	2	10	45.45454545454545	0.3633130081300813	72.01646090534979	10	0.9	72.01646090534979	10	0.9	NA	NA	NA	79.36241610738254	26	0.7692307692307693	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018245	Chromosome_3A	1821	1	39	39.86820428336079	0.5426724434358022	1.7094017094017093	8	0	1.7094017094017093	8	0	NA	NA	NA	9.1937069813176	62	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN018244	Chromosome_3A	408	1	11	44.6078431372549	0.5422254440014498	1.7793594306049823	11	0	1.7793594306049823	11	0	NA	NA	NA	0.43811610076670315	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018243	Chromosome_3A	282	1	5	46.09929078014184	0.3344402277039848	2.255639097744361	5	0	2.255639097744361	5	0	NA	NA	NA	0.4424778761061947	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018242	Chromosome_3A	369	1	19	46.070460704607044	0.9709181553801413	1.116751269035533	19	0	1.116751269035533	19	0	NA	NA	NA	0.6101409636019356	73	0	unmethylated (<10%)	Q13972	Ras-specific guanine nucleotide-releasing factor 1 (Ras-GRF1) (Guanine nucleotide-releasing protein) (GNRP) (Ras-specific nucleotide exchange factor CDC25)	long-term memory [GO:0007616]; negative regulation of MAPK cascade [GO:0043409]; neuron projection development [GO:0031175]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of Ras protein signal transduction [GO:0046579]; Ras protein signal transduction [GO:0007265]; regulation of Ras protein signal transduction [GO:0046578]; regulation of synaptic plasticity [GO:0048167]; response to endoplasmic reticulum stress [GO:0034976]; signal transduction [GO:0007165]	hit with GO BP
GN018241	Chromosome_3A	7968	5	150	33.20783132530121	0.6835991679216286	90.48930505829432	148	1	94.14776883686906	44	1	89.2633901213384	104	1	91.21621621621621	28	0.9642857142857143	methylated (>=50%)	Q3UXZ6	Protein FAM81A	NA	hit, no GO BP
GN018240	Chromosome_3A	429	1	0	42.19114219114219	0	NA	0	NA	NA	NA	NA	NA	NA	NA	59.61820851688693	26	0.7692307692307693	NA	NA	NA	NA	no Swiss-Prot hit
GN018239	Chromosome_3A	354	1	7	38.70056497175141	0.5696551724137932	94.55535390199637	7	1	94.55535390199637	7	1	NA	NA	NA	87.83559827643354	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018238	Chromosome_3A	6453	3	78	35.28591352859135	0.3892122869258869	83.3984375	77	0.8961038961038961	93.19412219644238	17	1	80.08884243532793	60	0.8666666666666667	87.24756918474196	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018237	Chromosome_3A	29008	19	645	34.71111417539989	0.753927137010559	0.8133833285261033	638	0	0.792521845153424	91	0	0.8168341793001446	547	0	1.651305683563748	60	0	unmethylated (<10%)	P20918	Plasminogen [Cleaved into: Plasmin (EC 3.4.21.7); Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	biological process involved in interaction with symbiont [GO:0051702]; blood coagulation [GO:0007596]; collagen catabolic process [GO:0030574]; extracellular matrix disassembly [GO:0022617]; fibrinolysis [GO:0042730]; labyrinthine layer blood vessel development [GO:0060716]; mononuclear cell migration [GO:0071674]; muscle cell cellular homeostasis [GO:0046716]; myoblast differentiation [GO:0045445]; negative regulation of angiogenesis [GO:0016525]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of fibrinolysis [GO:0051918]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of fibrinolysis [GO:0051919]; protein catabolic process [GO:0030163]; protein processing [GO:0016485]; proteolysis [GO:0006508]; tissue regeneration [GO:0042246]; trans-synaptic signaling by BDNF, modulating synaptic transmission [GO:0099183]; trophoblast giant cell differentiation [GO:0060707]	hit with GO BP
GN018236	Chromosome_3A	5262	3	56	37.115165336374005	0.3091137965760322	88.08571428571429	56	1	89.88439306358381	26	1	86.90926275992439	30	1	0.7840574975498203	43	0	methylated (>=50%)	Q8N1W2	Zinc finger protein 710	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN018235	Chromosome_3A	549	1	20	42.98724954462659	0.8321333838575218	90.59350503919373	20	1	90.59350503919373	20	1	NA	NA	NA	91.11791730474732	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018234	Chromosome_3A	901	2	28	40.62153163152053	0.7654126213592233	0.47337278106508873	28	0	0.49019607843137253	24	0	0.4291845493562232	4	0	0.5325814536340853	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018233	Chromosome_3A	32083	16	575	34.644515787177006	0.597410364926411	85.12028709405875	548	0.9616788321167883	89.88079470198676	59	0.9152542372881356	84.68586071022796	489	0.967280163599182	28.45528455284553	19	0.2631578947368421	methylated (>=50%)	Q92541	RNA polymerase-associated protein RTF1 homolog	chromatin organization [GO:0006325]; endodermal cell fate commitment [GO:0001711]; negative regulation of transcription by RNA polymerase II [GO:0000122]; stem cell population maintenance [GO:0019827]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN018232	Chromosome_3A	39320	11	462	34.707527975584945	0.39582616092743456	85.35480273246898	448	0.9575892857142857	78.03360298693217	55	0.8909090909090909	86.27835779888531	393	0.9669211195928753	59.86842105263158	49	0.6326530612244898	methylated (>=50%)	Q9HBF4	Zinc finger FYVE domain-containing protein 1 (Double FYVE-containing protein 1) (SR3) (Tandem FYVE fingers-1)	cellular response to starvation [GO:0009267]; host-mediated activation of viral genome replication [GO:0044829]; lipid droplet formation [GO:0140042]; macroautophagy [GO:0016236]	hit with GO BP
GN018231	Chromosome_3A	616	2	13	42.857142857142854	0.4664492078285182	70.19867549668874	13	0.9230769230769231	70.58823529411765	11	0.9090909090909091	64.28571428571429	2	1	88.33233353329334	47	0.9574468085106383	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018230	Chromosome_3A	1623	2	32	36.290819470117064	0.5999029731790145	85.16624040920716	32	0.96875	72.8476821192053	3	1	86.01366742596811	29	0.9655172413793104	83.67748279252704	25	1	methylated (>=50%)	Q7ZVK3	NAD-dependent protein deacetylase sirtuin-2 (EC 2.3.1.286) (NAD-dependent protein deacylase sirtuin-2) (EC 2.3.1.-) (NAD-dependent protein defatty-acylase sirtuin-2) (EC 2.3.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2)	cellular response to caloric restriction [GO:0061433]; cellular response to hypoxia [GO:0071456]; cellular response to oxidative stress [GO:0034599]; cilium assembly [GO:0060271]; hemopoiesis [GO:0030097]; negative regulation of angiogenesis [GO:0016525]; negative regulation of autophagy [GO:0010507]; negative regulation of oligodendrocyte progenitor proliferation [GO:0070446]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA binding [GO:0043388]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein deacetylation [GO:0006476]; rDNA heterochromatin formation [GO:0000183]; regulation of cell cycle [GO:0051726]; regulation of tubulin deacetylation [GO:0090043]; swimming behavior [GO:0036269]; tubulin deacetylation [GO:0090042]	hit with GO BP
GN018229	Chromosome_3A	12092	8	117	34.775057889513725	0.3217161176417618	74.17732589920192	116	0.8620689655172413	88.37988826815642	12	1	72.63693650024237	104	0.8461538461538461	78.20823244552058	22	0.8181818181818182	methylated (>=50%)	Q7ZVK3	NAD-dependent protein deacetylase sirtuin-2 (EC 2.3.1.286) (NAD-dependent protein deacylase sirtuin-2) (EC 2.3.1.-) (NAD-dependent protein defatty-acylase sirtuin-2) (EC 2.3.1.-) (Regulatory protein SIR2 homolog 2) (SIR2-like protein 2)	cellular response to caloric restriction [GO:0061433]; cellular response to hypoxia [GO:0071456]; cellular response to oxidative stress [GO:0034599]; cilium assembly [GO:0060271]; hemopoiesis [GO:0030097]; negative regulation of angiogenesis [GO:0016525]; negative regulation of autophagy [GO:0010507]; negative regulation of oligodendrocyte progenitor proliferation [GO:0070446]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA binding [GO:0043388]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein deacetylation [GO:0006476]; rDNA heterochromatin formation [GO:0000183]; regulation of cell cycle [GO:0051726]; regulation of tubulin deacetylation [GO:0090043]; swimming behavior [GO:0036269]; tubulin deacetylation [GO:0090042]	hit with GO BP
GN018228	Chromosome_3A	2883	3	55	35.20638224072147	0.6156525182872851	94.55541237113403	55	1	96.99398797595191	10	1	94.08829174664108	45	1	94.02720283855707	25	1	methylated (>=50%)	Q8CFK2	Transcription factor IIIB 90 kDa subunit (TFIIIB90) (mTFIIIB90) (B-related factor 1) (BRF-1)	DNA-templated transcription initiation [GO:0006352]; positive regulation of transcription by RNA polymerase III [GO:0045945]; regulation of mRNA stability [GO:0043488]; transcription by RNA polymerase III [GO:0006383]; transcription preinitiation complex assembly [GO:0070897]	hit with GO BP
GN018227	Chromosome_3A	1797	2	38	40.95715080690039	0.5044769503546099	94.39946018893387	38	1	94.51476793248945	37	1	91.66666666666667	1	1	39.58916900093371	34	0.29411764705882354	methylated (>=50%)	P58545	BTB/POZ domain-containing protein 3	cerebral cortex development [GO:0021987]; dendrite morphogenesis [GO:0048813]; neurogenesis [GO:0022008]	hit with GO BP
GN018226	Chromosome_3A	33130	14	374	34.71174162390582	0.3748114503857204	79.52074651204929	360	0.8916666666666667	57.19313682358117	46	0.5869565217391305	82.08352269858102	314	0.9363057324840764	48.98989898989899	39	0.48717948717948717	methylated (>=50%)	O46606	Phospholipase DDHD1 (EC 3.1.1.111) (EC 3.1.1.32) (DDHD domain-containing protein 1) (Phosphatidic acid-preferring phospholipase A1) (PA-PLA1) (EC 3.1.1.118) (Phospholipid sn-1 acylhydrolase)	phosphatidylinositol metabolic process [GO:0046488]	hit with GO BP
GN018225	Chromosome_3A	1746	1	46	42.66895761741122	0.5841333566067376	92.7348643006263	46	1	92.7348643006263	46	1	NA	NA	NA	43.47826086956522	10	0.4	methylated (>=50%)	P57103	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3) (Solute carrier family 8 member 3)	calcium ion export across plasma membrane [GO:1990034]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport into cytosol [GO:0060402]; cell communication [GO:0007154]; cellular response to cAMP [GO:0071320]; cellular response to hypoxia [GO:0071456]; intracellular calcium ion homeostasis [GO:0006874]; learning [GO:0007612]; learning or memory [GO:0007611]; long-term synaptic potentiation [GO:0060291]; memory [GO:0007613]; mitochondrial calcium ion homeostasis [GO:0051560]; mitochondrial calcium ion transmembrane transport [GO:0006851]; modulation of excitatory postsynaptic potential [GO:0098815]; myelination [GO:0042552]; negative regulation of intracellular signal transduction [GO:1902532]; oligodendrocyte differentiation [GO:0048709]; regulation of cardiac conduction [GO:1903779]; regulation of skeletal muscle contraction [GO:0014819]; sodium ion transmembrane transport [GO:0035725]; synapse organization [GO:0050808]; telencephalon development [GO:0021537]	hit with GO BP
GN018224	Chromosome_3A	1389	2	36	39.23686105111591	0.6793467923810559	0.43343653250773995	36	0	0.7009345794392523	21	0	0.13175230566534915	15	0	1.0282776349614395	51	0	unmethylated (<10%)	Q66II5	Trans-L-3-hydroxyproline dehydratase (EC 4.2.1.77) (Trans-3-hydroxy-L-proline dehydratase)	NA	hit, no GO BP
GN018223	Chromosome_3A	10232	5	98	39.425332290852225	0.24925576446958925	91.222683763771	94	0.9574468085106383	93.15525876460768	23	1	90.68909887070754	71	0.9436619718309859	88.71742112482853	33	0.9393939393939394	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018222	Chromosome_3A	3476	5	74	36.85270425776755	0.6285284228633983	93.18600368324125	74	1	94.2450914014895	25	1	92.64039065224974	49	1	85.44949026876738	15	1	methylated (>=50%)	Q9BUH8	Brain-enriched guanylate kinase-associated protein	evoked excitatory postsynaptic potential [GO:0098817]	hit with GO BP
GN018221	Chromosome_3A	2414	6	20	32.062966031483015	0.3225009184729969	92.77929155313352	20	1	93.86281588447653	5	1	92.52728799328295	15	1	89.4308943089431	10	1	methylated (>=50%)	Q9VZF4	F-box/WD repeat-containing protein 7 (F-box and WD-40 domain-containing protein 7) (Protein archipelago)	branch fusion, open tracheal system [GO:0035147]; cellular response to hypoxia [GO:0071456]; DNA endoreduplication [GO:0042023]; negative regulation of cellular response to hypoxia [GO:1900038]; negative regulation of glial cell proliferation [GO:0060253]; negative regulation of growth [GO:0045926]; negative regulation of imaginal disc growth [GO:0045571]; protein ubiquitination [GO:0016567]; regulation of exit from mitosis [GO:0007096]; regulation of mitotic nuclear division [GO:0007088]; regulation of proteolysis [GO:0030162]; regulation of transcription by RNA polymerase II [GO:0006357]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; trachea development [GO:0060438]; ventral cord development [GO:0007419]	hit with GO BP
GN018250	Chromosome_3A	18804	7	445	36.8325888108913	0.6985024541720926	4.527442496014575	402	0	1.3117621337997376	60	0	4.901362619483425	342	0	0.6802721088435374	66	0	unmethylated (<10%)	Q504Y2	Extracellular tyrosine-protein kinase PKDCC (EC 2.7.10.2) (Protein kinase domain-containing protein, cytoplasmic) (Protein kinase-like protein SgK493) (Sugen kinase 493) (Vertebrate lonesome kinase)	embryonic digestive tract development [GO:0048566]; lung alveolus development [GO:0048286]; negative regulation of Golgi to plasma membrane protein transport [GO:0042997]; peptidyl-tyrosine phosphorylation [GO:0018108]; positive regulation of bone mineralization [GO:0030501]; positive regulation of chondrocyte differentiation [GO:0032332]; roof of mouth development [GO:0060021]; skeletal system development [GO:0001501]	hit with GO BP
GN018251	Chromosome_3A	14467	12	201	36.66274970622797	0.4138596669757473	84.32471379393164	198	0.898989898989899	71.18326568841711	57	0.7368421052631579	88.85658914728683	141	0.9645390070921985	0.9322974472807991	82	0	methylated (>=50%)	Q7TN31	Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (mVG5Q)	cell adhesion [GO:0007155]; positive regulation of angiogenesis [GO:0045766]; positive regulation of endothelial cell proliferation [GO:0001938]	hit with GO BP
GN018252	Chromosome_3A	573	1	26	47.4694589877836	0.8128990014732362	0.6611570247933884	26	0	0.6611570247933884	26	0	NA	NA	NA	1.5013246982631734	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018253	Chromosome_3A	2015	2	98	44.168734491315135	0.9973786422478016	0.7083333333333334	90	0	0.765420981539847	87	0	0	3	0	0.3497376967274544	58	0	unmethylated (<10%)	H2A0M3	Putative amine oxidase [copper-containing] (EC 1.4.3.-)	amine metabolic process [GO:0009308]	hit with GO BP
GN018254	Chromosome_3A	5032	4	171	37.83783783783784	0.9495146338152971	1.9393139841688654	168	0	3.0247479376718607	58	0	1.756819232547388	110	0	4.822777454968042	64	0	unmethylated (<10%)	Q8BQB6	Stabilizer of axonemal microtubules 2	NA	hit, no GO BP
GN018255	Chromosome_3A	1500	1	53	44.666666666666664	0.7252061592352039	5	53	0	5	53	0	NA	NA	NA	25.95108695652174	13	0.15384615384615385	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018256	Chromosome_3A	924	1	17	43.3982683982684	0.39716814159292035	88.35705045278137	17	1	88.35705045278137	17	1	NA	NA	NA	72.88414133114215	16	0.6875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018257	Chromosome_3A	20076	8	401	36.22733612273361	0.6087909355557652	84.50984731135208	373	0.9705093833780161	91.16047144152311	40	1	83.92082864942991	333	0.9669669669669669	78.51739788199697	21	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018258	Chromosome_3A	1329	2	33	40.481565086531226	0.6075049867021277	1.09460516028147	33	0	0.9873060648801129	23	0	1.2280701754385965	10	0	0.7986627043090639	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018265	Chromosome_3A	483	1	33	49.06832298136646	1.152327935222672	0.6796116504854369	33	0	0.6796116504854369	33	0	NA	NA	NA	0.4189108318372232	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018264	Chromosome_3A	590	2	6	37.45762711864407	0.2982810920121335	0.6993006993006993	6	0	0.6993006993006993	6	0	NA	NA	NA	3.8805970149253732	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016983	Chromosome_3A	601	1	26	56.07321131447588	0.5511816578483245	6.211180124223603	25	0	6.211180124223603	25	0	NA	NA	NA	0.8284023668639053	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018263	Chromosome_3A	987	1	28	47.82168186423505	0.4990970165426569	1.2345679012345678	18	0	1.2345679012345678	18	0	NA	NA	NA	0.5213764337851929	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018262	Chromosome_3A	315	1	10	47.301587301587304	0.5839822024471635	1.4705882352941178	10	0	1.4705882352941178	10	0	NA	NA	NA	1.7543859649122806	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018261	Chromosome_3A	9694	3	271	34.47493294821539	0.9413873013404447	2.3488841173791397	271	0	0.6472491909385113	44	0	2.497700417462676	227	0	0.5812263876780006	57	0	unmethylated (<10%)	Q96QS3	Homeobox protein ARX (Aristaless-related homeobox)	intestinal type D enteroendocrine cell differentiation [GO:7770025]; intestinal type G enteroendocrine cell differentiation [GO:7770021]; intestinal type I enteroendocrine cell differentiation [GO:7770022]; intestinal type L enteroendocrine cell differentiation [GO:7770023]; intestinal type N enteroendocrine cell differentiation [GO:7770024]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron development [GO:0048666]; pancreatic A cell differentiation [GO:0003310]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN018260	Chromosome_3A	168	1	7	54.166666666666664	0.5736585365853658	0	7	0	0	7	0	NA	NA	NA	0.5029337803855826	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018266	Chromosome_3A	4997	7	125	35.88152891735041	0.7777092982718263	0.6536918734214827	125	0	0.33809166040571	57	0	0.8601622020152372	68	0	1.941747572815534	41	0	unmethylated (<10%)	Q7Z442	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN018267	Chromosome_3A	20153	14	530	36.06907160224284	0.8102256733706757	0.6984595087501455	524	0	0.48887802493277926	96	0	0.7380073800738007	428	0	0.9009009009009009	40	0	unmethylated (<10%)	Q7Z442	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN018268	Chromosome_3A	2603	1	130	48.02151363810987	1.0235632183908046	0	15	0	0	15	0	NA	NA	NA	1.048313582497721	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018269	Chromosome_3A	1604	6	44	35.47381546134663	0.8752635364734479	0.5027652086475616	44	0	0.37509377344336087	31	0	0.7621951219512195	13	0	0.7593014426727411	55	0	unmethylated (<10%)	Q9Z0T6	Polycystin family receptor for egg jelly (PKD and REJ homolog) (Polycystic kidney disease and receptor for egg jelly-related protein)	detection of mechanical stimulus [GO:0050982]; regulation of acrosome reaction [GO:0060046]	hit with GO BP
GN018270	Chromosome_3A	24635	9	592	37.0123807590826	0.7017222747570531	1.9425464172003004	590	0	0.5526249686008541	140	0	2.173368930418822	450	0	0.5631003643590593	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018271	Chromosome_3A	903	1	33	42.74640088593577	0.8105263157894737	0.4604051565377532	33	0	0.4604051565377532	33	0	NA	NA	NA	0.37721614485099964	43	0	unmethylated (<10%)	O93529	Forkhead box protein B1 (FoxB1) (Transcription factor FKH-5)	anatomical structure morphogenesis [GO:0009653]; axon target recognition [GO:0007412]; cell differentiation [GO:0030154]; cell migration in diencephalon [GO:0061381]; ectoderm development [GO:0007398]; floor plate development [GO:0033504]; hypothalamus cell migration [GO:0021855]; inferior colliculus development [GO:0061379]; mammillary body development [GO:0021767]; mammillothalamic axonal tract development [GO:0061374]; midbrain development [GO:0030901]; negative regulation of neuron apoptotic process [GO:0043524]; neurogenesis [GO:0022008]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; somitogenesis [GO:0001756]; telencephalon cell migration [GO:0022029]; visual learning [GO:0008542]	hit with GO BP
GN018272	Chromosome_3A	2346	1	73	41.13384484228474	0.746599588463014	0.9154550350026925	73	0	0.9154550350026925	73	0	NA	NA	NA	0.28153153153153154	67	0	unmethylated (<10%)	H9JW43	Chitin deacetylase 8 (BmCDA8) (EC 3.5.1.41) (Chitin deacetylase 17)	polysaccharide catabolic process [GO:0000272]	hit with GO BP
GN015970	Chromosome_3A	1172	4	13	34.044368600682596	0.384844657741854	0.3885003885003885	13	0	0.45351473922902497	10	0	0.24691358024691357	3	0	0.5860415556739478	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002798	Chromosome_3A	1247	3	30	36.56776263031275	0.7199907619469197	0.5666957279860506	30	0	0.8308157099697885	21	0	0.20618556701030927	9	0	0.975800156128025	57	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN018277	Chromosome_3A	1110	1	52	41.98198198198198	1.1189299214888049	0.5529953917050692	52	0	0.5529953917050692	52	0	NA	NA	NA	0.4684572142410993	63	0	unmethylated (<10%)	Q26619	cAMP-dependent protein kinase type II regulatory subunit	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]	hit with GO BP
GN018276	Chromosome_3A	444	1	5	44.369369369369366	0.23255813953488372	1.5037593984962405	5	0	1.5037593984962405	5	0	NA	NA	NA	0.8491508491508492	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018275	Chromosome_3A	300	1	11	43	0.804093567251462	0.22573363431151242	11	0	0.22573363431151242	11	0	NA	NA	NA	3.1719532554257097	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018274	Chromosome_3A	4212	5	127	34.66286799620133	1.0271198156682029	0.6689401888772298	127	0	0.425531914893617	33	0	0.7359090148854324	94	0	0.3870967741935484	46	0	unmethylated (<10%)	Q497B8	Bifunctional peptidase and arginyl-hydroxylase JMJD5 (EC 1.14.11.73) (EC 3.4.-.-) (JmjC domain-containing protein 5) (Jumonji C domain-containing protein 5) (L-arginine (3R)-hydroxylase KDM8)	circadian regulation of gene expression [GO:0032922]; fibroblast proliferation [GO:0048144]; G2/M transition of mitotic cell cycle [GO:0000086]; in utero embryonic development [GO:0001701]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; protein destabilization [GO:0031648]; regulation of signal transduction by p53 class mediator [GO:1901796]	hit with GO BP
GN018273	Chromosome_3A	6722	7	66	34.12674799166915	0.33751834413250226	74.67622571692877	66	0.8333333333333334	64.23173803526448	13	0.7692307692307693	77.02549575070822	53	0.8490566037735849	3.1824294038547736	44	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010802	Chromosome_3A	1328	1	48	40.06024096385542	0.9013574660633484	NA	0	NA	NA	NA	NA	NA	NA	NA	74.7560975609756	14	0.7142857142857143	NA	NA	NA	NA	no Swiss-Prot hit
GN018283	Chromosome_3A	3339	4	57	34.38155136268344	0.5791318636176913	68.91078270388616	55	0.6909090909090909	45.01424501424501	8	0.375	71.45019679079624	47	0.7446808510638298	56.94760820045558	34	0.5588235294117647	methylated (>=50%)	Q9Y3U8	Large ribosomal subunit protein eL36 (60S ribosomal protein L36)	cytoplasmic translation [GO:0002181]; negative regulation of myoblast fusion [GO:1901740]; spermatogenesis [GO:0007283]; striated muscle contraction [GO:0006941]; translation [GO:0006412]	hit with GO BP
GN018282	Chromosome_3A	38734	24	573	36.04068776785253	0.4574429387668891	87.97051442910916	539	0.9628942486085343	92.5685638454733	63	1	87.52330417323964	476	0.957983193277311	83.24958123953098	31	0.967741935483871	methylated (>=50%)	O88700	RecQ-like DNA helicase BLM (EC 5.6.2.4) (Bloom syndrome protein homolog) (mBLM) (DNA 3'-5' helicase BLM) (RecQ helicase homolog)	alpha-beta T cell differentiation [GO:0046632]; cellular response to camptothecin [GO:0072757]; cellular response to hydroxyurea [GO:0072711]; cellular response to ionizing radiation [GO:0071479]; cellular response to xenobiotic stimulus [GO:0071466]; chromosome organization [GO:0051276]; DNA damage response [GO:0006974]; DNA double-strand break processing [GO:0000729]; DNA geometric change [GO:0032392]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of cell division [GO:0051782]; negative regulation of DNA recombination [GO:0045910]; negative regulation of mitotic recombination [GO:0045950]; negative regulation of thymocyte apoptotic process [GO:0070244]; positive regulation of alpha-beta T cell proliferation [GO:0046641]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; protein complex oligomerization [GO:0051259]; protein homooligomerization [GO:0051260]; regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0000079]; replication fork processing [GO:0031297]; replication-born double-strand break repair via sister chromatid exchange [GO:1990414]; resolution of DNA recombination intermediates [GO:0071139]; response to X-ray [GO:0010165]; telomere maintenance [GO:0000723]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN018281	Chromosome_3A	5426	2	62	40.950976778474015	0.27345566867849375	88.13485113835377	62	0.9516129032258065	88.13485113835377	62	0.9516129032258065	NA	NA	NA	85.94847775175644	10	1	methylated (>=50%)	Q9HCE3	Zinc finger protein 532	NA	hit, no GO BP
GN018280	Chromosome_3A	14910	8	165	35.63380281690141	0.350019918618217	83.28638497652582	157	0.9554140127388535	90.9423604757548	18	1	82.30098916627414	139	0.9496402877697842	66.2953995157385	58	0.5172413793103449	methylated (>=50%)	Q497B8	Bifunctional peptidase and arginyl-hydroxylase JMJD5 (EC 1.14.11.73) (EC 3.4.-.-) (JmjC domain-containing protein 5) (Jumonji C domain-containing protein 5) (L-arginine (3R)-hydroxylase KDM8)	circadian regulation of gene expression [GO:0032922]; fibroblast proliferation [GO:0048144]; G2/M transition of mitotic cell cycle [GO:0000086]; in utero embryonic development [GO:0001701]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; protein destabilization [GO:0031648]; regulation of signal transduction by p53 class mediator [GO:1901796]	hit with GO BP
GN018279	Chromosome_3A	1646	2	26	36.452004860267316	0.475939456622071	91.5534554046072	26	1	86.36363636363636	11	1	93.3758978451716	15	1	61.02877070619006	22	0.5909090909090909	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018278	Chromosome_3A	468	1	8	42.0940170940171	0.3944374209860936	29.72972972972973	8	0.25	29.72972972972973	8	0.25	NA	NA	NA	39.30064614215127	38	0.5263157894736842	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018284	Chromosome_3A	9574	5	205	36.317108836432006	0.6493940065711327	88.60116780908861	201	0.9651741293532339	80.53596614950635	12	0.9166666666666666	89.11595246669067	189	0.9682539682539683	81.05387803433985	24	1	methylated (>=50%)	E1B8U2	U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 (EC 2.1.1.-) (THUMP domain-containing protein 2)	regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; tRNA methylation [GO:0030488]	hit with GO BP
GN015696	Chromosome_3A	690	1	21	41.88405797101449	0.6943645773433007	0.5370569280343717	21	0	0.5370569280343717	21	0	NA	NA	NA	0.4663363450888954	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018285	Chromosome_3A	6433	4	141	33.421420799005126	0.7849358242123409	0.6425431180250254	141	0	0.5858230814294083	34	0	0.6560580681183696	107	0	0.5729693292888439	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016374	Chromosome_3A	598	2	5	52.675585284280935	0.12282287216562603	0	5	0	0	5	0	NA	NA	NA	8.368200836820083	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018286	Chromosome_3A	381	2	7	37.270341207349084	0.5397692774741955	30.406852248394003	7	0	30.406852248394003	7	0	NA	NA	NA	18.26625386996904	31	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018287	Chromosome_3A	622	2	4	33.440514469453376	0.24296875	0.7905138339920948	4	0	0.8310249307479224	3	0	0.6896551724137931	1	0	1.919431279620853	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018288	Chromosome_3A	2080	5	18	36.34615384615385	0.2631819427944805	24.300486618004864	18	0	23.656776263031276	13	0	26.32241813602015	5	0	4.382060938034919	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018290	Chromosome_3A	1914	1	27	40.90909090909091	0.33725771715721464	0	10	0	0	10	0	NA	NA	NA	1.3157894736842106	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018289	Chromosome_3A	1281	1	45	40.749414519906324	0.8486566065513433	2.293577981651376	11	0	2.293577981651376	11	0	NA	NA	NA	0.3125	25	0	unmethylated (<10%)	Q93075	3'-5' RNA nuclease TATDN2 (EC 3.1.13.-) (TatD DNase domain containing 2)	NA	hit, no GO BP
GN002563	Chromosome_3A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018292	Chromosome_3A	666	1	33	42.192192192192195	1.1165413533834587	0.4691164972634871	33	0	0.4691164972634871	33	0	NA	NA	NA	0.6872852233676976	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018293	Chromosome_3A	1720	2	78	41.86046511627907	1.0352570780378267	1.1372867587327375	78	0	0.4224757076468103	55	0	2.4132730015082955	23	0	0.711892797319933	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018294	Chromosome_3A	1197	1	71	45.02923976608187	1.172266821153687	0.746268656716418	71	0	0.746268656716418	71	0	NA	NA	NA	4.743912678421495	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018295	Chromosome_3A	933	1	41	41.264737406216504	1.0366666666666666	1.3029315960912051	41	0	1.3029315960912051	41	0	NA	NA	NA	32.33898305084746	31	0.3225806451612903	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018299	Chromosome_3A	11889	9	349	37.0342333249222	0.8562818531671149	1.5350376626341018	349	0	0.5410566518141311	59	0	1.7521902377972465	290	0	0.6394884092725819	38	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN018298	Chromosome_3A	8196	8	274	37.896534895070765	0.9311381118707148	1.1397026088505031	256	0	0.5518763796909493	55	0	1.3273816515916832	201	0	2.2716288061865635	51	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN018297	Chromosome_3A	10161	6	151	38.824918807204014	0.3946831470501228	93.26567164179104	150	1	94.19475655430712	40	1	93.04591761405581	110	1	72.55813953488372	26	0.7692307692307693	methylated (>=50%)	Q5VT52	Regulation of nuclear pre-mRNA domain-containing protein 2	mRNA 3'-end processing [GO:0031124]	hit with GO BP
GN002306	Chromosome_3A	323	1	6	44.89164086687307	0.3726923076923077	78.35051546391753	6	0.8333333333333334	78.35051546391753	6	0.8333333333333334	NA	NA	NA	80	12	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018300	Chromosome_3A	10885	9	153	35.03904455672944	0.45840422190837504	85.01945525291829	153	0.9281045751633987	69.78636826042727	19	0.7894736842105263	86.54571399449597	134	0.9477611940298507	24.873096446700508	29	0.41379310344827586	methylated (>=50%)	Q9D0C1	E3 ubiquitin-protein ligase RNF115 (EC 2.3.2.27) (RING finger protein 115) (RING-type E3 ubiquitin transferase RNF115) (Rab7-interacting RING finger protein) (Rabring 7) (Zinc finger protein 364)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi to plasma membrane transport [GO:0006893]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of toll-like receptor signaling pathway [GO:0034122]; positive regulation of toll-like receptor signaling pathway [GO:0034123]; protein autoubiquitination [GO:0051865]; protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; toll-like receptor 4 signaling pathway [GO:0034142]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]	hit with GO BP
GN018301	Chromosome_3A	1524	1	15	38.58267716535433	0.2646691057287084	67.69706336939721	15	0.8	67.69706336939721	15	0.8	NA	NA	NA	25.12184315463004	33	0.2727272727272727	methylated (>=50%)	Q6NXR4	TELO2-interacting protein 2	positive regulation of DNA damage checkpoint [GO:2000003]; protein stabilization [GO:0050821]	hit with GO BP
GN018304	Chromosome_3A	16793	23	253	35.65175966176383	0.47645582356339783	82.59319286871961	250	0.948	90.88368843870066	66	1	81.07624464753627	184	0.9293478260869565	1.2820512820512822	56	0	methylated (>=50%)	Q6TFL3	Coiled-coil domain-containing protein 171	NA	hit, no GO BP
GN018306	Chromosome_3A	18296	12	206	37.30323567993004	0.3237227129390104	53.332552418882514	195	0.6153846153846154	72.73467173087357	109	0.8440366972477065	38.5899814471243	86	0.32558139534883723	15.171288743882545	21	0	methylated (>=50%)	Q9ULL1	Pleckstrin homology domain-containing family G member 1	regulation of small GTPase mediated signal transduction [GO:0051056]	hit with GO BP
GN018307	Chromosome_3A	3414	5	101	39.04510837727006	0.7766395934970337	6.4646464646464645	98	0	4.21455938697318	40	0	7.570621468926554	58	0	0.648228176318064	71	0	unmethylated (<10%)	O95069	Potassium channel subfamily K member 2 (Outward rectifying potassium channel protein TREK-1) (TREK-1 K(+) channel subunit) (Two pore domain potassium channel TREK1) (Two pore potassium channel TPKC1) (K2P2.1)	cardiac ventricle development [GO:0003231]; cellular response to arachidonate [GO:1904551]; cellular response to hypoxia [GO:0071456]; chloride transmembrane transport [GO:1902476]; cochlea development [GO:0090102]; detection of mechanical stimulus involved in sensory perception of touch [GO:0050976]; glutamate secretion [GO:0014047]; memory [GO:0007613]; negative regulation of cardiac muscle cell proliferation [GO:0060044]; negative regulation of DNA biosynthetic process [GO:2000279]; neuronal action potential [GO:0019228]; positive regulation of cellular response to hypoxia [GO:1900039]; potassium ion transmembrane transport [GO:0071805]; regulation of synaptic transmission, GABAergic [GO:0032228]; response to axon injury [GO:0048678]	hit with GO BP
GN018308	Chromosome_3A	657	1	23	48.55403348554034	0.5976506881822496	0.5199306759098787	23	0	0.5199306759098787	23	0	NA	NA	NA	0.599128540305011	46	0	unmethylated (<10%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018311	Chromosome_3A	543	1	9	46.04051565377532	0.31439783839423574	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018310	Chromosome_3A	249	1	7	48.99598393574297	0.47467320261437906	NA	0	NA	NA	NA	NA	NA	NA	NA	37.37373737373738	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018312	Chromosome_3A	449	2	6	40.75723830734967	0.3229441380963798	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018309	Chromosome_3A	449	2	6	40.75723830734967	0.3229441380963798	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018313	Chromosome_3A	249	1	7	48.99598393574297	0.47467320261437906	NA	0	NA	NA	NA	NA	NA	NA	NA	83.36933045356372	29	0.896551724137931	NA	NA	NA	NA	no Swiss-Prot hit
GN018314	Chromosome_3A	543	1	9	46.04051565377532	0.31439783839423574	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018315	Chromosome_3A	4042	6	60	38.446313706086094	0.4031786141774172	60.52899287894201	53	0.71698113207547165	59.51704545454545	28	0.7142857142857143	61.09350237717908	25	0.72	66.50246305418719	18	0.8333333333333334	methylated (>=50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018316	Chromosome_3A	2596	5	39	39.32973805855162	0.38880184331797235	57.08920187793427	20	0.7	63.46153846153846	8	0.875	54.44887118193891	12	0.5833333333333334	48.69976359338062	20	0.35	methylated (>=50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018317	Chromosome_3A	1182	1	28	50.42301184433164	0.3971774193548387	57.608695652173914	25	0.6	57.608695652173914	25	0.6	NA	NA	NA	54.24575424575425	9	0.5555555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018318	Chromosome_3A	1125	1	25	50.577777777777776	0.3769096756901635	41.75	25	0.36	41.75	25	0.36	NA	NA	NA	38.17097415506958	7	0.14285714285714285	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018319	Chromosome_3A	1305	1	35	49.88505747126437	0.4745553154351259	57.659033078880405	35	0.8285714285714286	57.659033078880405	35	0.8285714285714286	NA	NA	NA	36.17363344051447	9	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018320	Chromosome_3A	1164	1	29	51.11683848797251	0.410726887791108	58.34038950042337	29	0.8275862068965517	58.34038950042337	29	0.8275862068965517	NA	NA	NA	26.952850105559467	6	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018321	Chromosome_3A	1036	2	5	44.01544401544402	0.10164835164835165	44.04332129963899	5	0.2	44.04332129963899	5	0.2	NA	NA	NA	56.027045931452555	42	0.7619047619047619	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018322	Chromosome_3A	2134	6	18	35.8950328022493	0.26406533575317603	49.120603015075375	18	0.4444444444444444	52.903225806451616	13	0.5384615384615384	43.80664652567976	5	0.2	33.333333333333336	7	0.5714285714285714	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018323	Chromosome_3A	2847	1	75	42.14963119072708	0.5946115288220551	20.309708159618822	61	0	20.309708159618822	61	0	NA	NA	NA	0.7275132275132276	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018324	Chromosome_3A	537	1	10	50.65176908752328	0.30134680134680136	6.578947368421052	5	0	6.578947368421052	5	0	NA	NA	NA	11.911357340720222	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018325	Chromosome_3A	216	1	10	43.98148148148148	1.128526645768025	15.909090909090908	4	0	15.909090909090908	4	0	NA	NA	NA	48.091603053435115	18	0.5555555555555556	NA	NA	NA	NA	no Swiss-Prot hit
GN018326	Chromosome_3A	562	2	8	38.96797153024911	0.3750417083750417	NA	0	NA	NA	NA	NA	NA	NA	NA	47.76371308016878	46	0.34782608695652173	NA	NA	NA	NA	no Swiss-Prot hit
GN018327	Chromosome_3A	183	1	4	53.005464480874316	0.5147679324894515	86.25954198473282	4	1	86.25954198473282	4	1	NA	NA	NA	35.88516746411483	50	0.22	NA	NA	NA	NA	no Swiss-Prot hit
GN018328	Chromosome_3A	1658	2	17	38.480096501809406	0.28785604134113585	32.608695652173914	3	0.3333333333333333	42.10526315789474	2	0.5	25.925925925925927	1	0	83.33333333333333	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018329	Chromosome_3A	1023	1	15	42.32649071358749	0.3275906237991546	23.382923673997414	15	0.06666666666666667	23.382923673997414	15	0.06666666666666667	NA	NA	NA	51.77048706460471	22	0.5909090909090909	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018330	Chromosome_3A	429	1	12	44.28904428904429	0.5726999666258761	33.27913279132791	5	0	33.27913279132791	5	0	NA	NA	NA	58.49428458809618	17	0.7647058823529411	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018331	Chromosome_3A	969	1	25	51.083591331269346	0.4180327868852459	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018332	Chromosome_3A	3965	7	63	38.511979823455235	0.428714859437751	32	9	0.2222222222222222	45.833333333333336	2	0	30.113636363636363	7	0.2857142857142857	36.597938144329895	12	0.3333333333333333	sparse (10-50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018333	Chromosome_3A	969	1	25	51.18679050567595	0.4175068507316064	21.53846153846154	4	0	21.53846153846154	4	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018339	Chromosome_3A	4017	7	63	38.38685586258402	0.425961553027434	31.773399014778324	12	0	30	1	0	31.818181818181817	11	0	17.647058823529413	9	0.2222222222222222	sparse (10-50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018338	Chromosome_3A	969	1	25	51.18679050567595	0.41584413355076816	NA	0	NA	NA	NA	NA	NA	NA	NA	17.391304347826086	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018337	Chromosome_3A	6985	11	91	37.523264137437366	0.370112553205117	29.170638703527167	36	0.1388888888888889	37.91469194312796	9	0.1111111111111111	26.968973747016708	27	0.14814814814814814	21.819526627218934	24	0.041666666666666664	sparse (10-50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018336	Chromosome_3A	969	1	25	51.18679050567595	0.4166666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018335	Chromosome_3A	7505	10	106	37.82811459027315	0.3948255239740135	35.51495016611295	62	0.3064516129032258	40.65934065934066	21	0.38095238095238093	33.591967138293015	41	0.2682926829268293	24.816889271865577	20	0	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018341	Chromosome_3A	969	1	25	51.289989680082556	0.4144851657940663	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018334	Chromosome_3A	1791	4	31	39.810161920714684	0.43710439300897497	NA	0	NA	NA	NA	NA	NA	NA	NA	39.823008849557525	9	0.2222222222222222	NA	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018353	Chromosome_3A	969	1	25	51.289989680082556	0.4144851657940663	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018354	Chromosome_3A	2596	5	39	39.21417565485362	0.3911209321012455	41.45077720207254	9	0.3333333333333333	46.38069705093834	8	0.375	32.52427184466019	1	0	60	5	0.8	sparse (10-50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018355	Chromosome_3A	969	1	25	51.289989680082556	0.4144851657940663	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018356	Chromosome_3A	2598	5	38	39.14549653579677	0.3821150169142521	NA	0	NA	NA	NA	NA	NA	NA	NA	61.206896551724135	6	0.8333333333333334	NA	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018351	Chromosome_3A	969	1	25	51.289989680082556	0.4144851657940663	30.76923076923077	2	0	30.76923076923077	2	0	NA	NA	NA	33.333333333333336	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018350	Chromosome_3A	2596	5	36	39.098613251155626	0.3630769230769231	10	1	0	10	1	0	NA	NA	NA	44.55569461827284	13	0.3076923076923077	NA	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018349	Chromosome_3A	906	1	22	51.324503311258276	0.38934250107434465	9.090909090909092	1	0	9.090909090909092	1	0	NA	NA	NA	31.03448275862069	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018348	Chromosome_3A	2586	5	38	39.327146171693734	0.38044134727061557	36.206896551724135	3	0.6666666666666666	31.914893617021278	2	0.5	54.54545454545455	1	1	58.90909090909091	11	0.7272727272727273	NA	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018347	Chromosome_3A	969	1	24	51.083591331269346	0.4021164021164021	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018352	Chromosome_3A	5629	5	87	40.30911351927518	0.3804974127080323	59.56006768189509	49	0.6530612244897959	56.25	3	0.3333333333333333	59.65217391304348	46	0.6739130434782609	60.51282051282051	10	0.9	methylated (>=50%)	Q8K3K1	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; retina development in camera-type eye [GO:0060041]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018370	Chromosome_3A	342	1	5	48.538011695906434	0.24836601307189543	2.051282051282051	3	0	2.051282051282051	3	0	NA	NA	NA	7.706366128540969	51	0	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN018369	Chromosome_3A	189	1	4	47.61904761904762	0.38009049773755654	7.092198581560283	4	0	7.092198581560283	4	0	NA	NA	NA	2.6573426573426575	28	0	NA	Q99NE9	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; embryonic organ development [GO:0048568]; eye development [GO:0001654]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN018368	Chromosome_3A	957	1	26	50.26123301985371	0.48914838405284267	3.9337474120082816	25	0	3.9337474120082816	25	0	NA	NA	NA	0.9259259259259259	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018367	Chromosome_3A	1187	2	30	50.46335299073294	0.42627307333189685	1.0309278350515463	13	0	1.0309278350515463	13	0	NA	NA	NA	8.072916666666666	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018366	Chromosome_3A	1363	2	32	48.3492296404989	0.4369114877589454	35.13513513513514	5	0.4	54.166666666666664	4	0.5	0	1	0	1.2330456226880395	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018365	Chromosome_3A	3634	6	42	35.82828838745184	0.3638808425419304	25.222363405336722	42	0.16666666666666666	20.187793427230048	20	0.1	28.663101604278076	22	0.22727272727272727	7.633587786259542	8	0	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018364	Chromosome_3A	1503	3	27	42.24883566200931	0.4035260425988903	34.26791277258567	17	0.17647058823529413	34.34782608695652	13	0.15384615384615385	34.065934065934066	4	0.25	41.35338345864662	6	0.3333333333333333	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018363	Chromosome_3A	1851	1	29	46.08319827120476	0.29516661167931374	34.6875	16	0.1875	34.6875	16	0.1875	NA	NA	NA	34.26791277258567	17	0.17647058823529413	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018362	Chromosome_3A	3378	3	46	37.38898756660746	0.3897992153242557	36.040419161676645	46	0.2608695652173913	49.056603773584904	19	0.5263157894736842	29.989035087719298	27	0.07407407407407407	13.157894736842104	12	0	sparse (10-50%)	Q2QI47	Usherin (Usher syndrome type IIa protein homolog) (Usher syndrome type-2A protein homolog)	animal organ morphogenesis [GO:0009887]; establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]; tissue development [GO:0009888]	hit with GO BP
GN018361	Chromosome_3A	1489	3	18	36.87038280725319	0.3581048581048581	42.304886943836614	18	0.2777777777777778	43.46201743462017	11	0.2727272727272727	40.66901408450704	7	0.2857142857142857	45.19450800915332	18	0.5	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018371	Chromosome_3A	5399	8	29	37.41433598814595	0.15644912613074416	69.5373665480427	29	0.8620689655172413	74.11444141689373	18	0.8888888888888888	64.53055141579732	11	0.8181818181818182	84.23127463863338	22	1	methylated (>=50%)	A5D8S0	Centrosomal protein kizuna (Polo-like kinase 1 substrate 1)	spindle organization [GO:0007051]	hit with GO BP
GN018372	Chromosome_3A	1421	4	25	39.549612948627725	0.45136903627469666	89.94464944649447	25	0.96	91.70013386880856	17	0.9411764705882353	86.05341246290801	8	1	86.69558929862617	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018373	Chromosome_3A	15923	5	294	36.312252716196696	0.5614680853283939	57.99028506942741	206	0.7184466019417476	73.44961240310077	8	0.75	57.58872388623207	198	0.7171717171717171	42.61363636363637	53	0.49056603773584906	methylated (>=50%)	Q9Y3B9	RRP15-like protein (Ribosomal RNA-processing protein 15)	maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]	hit with GO BP
GN018374	Chromosome_3A	18194	14	167	35.2313949653732	0.30338544995015465	88.92688323443629	161	0.9565217391304348	91.72274562584118	24	0.9583333333333334	88.43561546647747	137	0.9562043795620438	69.03896103896103	39	0.6923076923076923	methylated (>=50%)	Q9Y2R4	Probable ATP-dependent RNA helicase DDX52 (EC 3.6.4.13) (ATP-dependent RNA helicase ROK1-like) (DEAD box protein 52)	maturation of SSU-rRNA [GO:0030490]	hit with GO BP
GN018375	Chromosome_3A	1317	2	29	44.34320425208808	0.44802224099099097	90.28213166144201	29	0.9655172413793104	90.28213166144201	29	0.9655172413793104	NA	NA	NA	89.74042027194066	27	0.9629629629629629	methylated (>=50%)	Q0VC91	Suppressor of cytokine signaling 4 (SOCS-4)	cytokine-mediated signaling pathway [GO:0019221]; intracellular signal transduction [GO:0035556]; negative regulation of epidermal growth factor-activated receptor activity [GO:0007175]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein ubiquitination [GO:0016567]	hit with GO BP
GN018376	Chromosome_3A	853	2	31	41.031652989449	0.8652531003566637	20.14519056261343	31	0	20.91254752851711	29	0	4	2	0	0.4513888888888889	66	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018377	Chromosome_3A	396	1	17	45.707070707070706	0.8225806451612904	11.145510835913313	17	0	11.145510835913313	17	0	NA	NA	NA	33.333333333333336	29	0.20689655172413793	sparse (10-50%)	Q1JQ99	Large ribosomal subunit protein uL14m (39S ribosomal protein L14, mitochondrial) (L14mt) (MRP-L14)	translation [GO:0006412]	hit with GO BP
GN018378	Chromosome_3A	8539	12	244	37.3228715306242	0.820528694457703	0.801254136909946	235	0	1.153612629022465	68	0	0.6595017098192477	167	0	0.4466501240694789	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018379	Chromosome_3A	5467	9	151	35.19297603804646	0.9034089168071089	0.5106048703849175	149	0	0.4342162396873643	54	0	0.5435801312089972	95	0	0.5703422053231939	47	0	unmethylated (<10%)	P42674	Blastula protease 10 (EC 3.4.24.-)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN018380	Chromosome_3A	6981	11	197	35.23850451224753	0.9096361077231202	0.9508309062874765	196	0	0.36737692872887584	70	0	1.2646555131076274	126	0	0.5656108597285068	50	0	unmethylated (<10%)	P42674	Blastula protease 10 (EC 3.4.24.-)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN018381	Chromosome_3A	8791	10	136	36.03685587532704	0.4783352510870383	86.41120117907148	124	0.8870967741935484	81.5968841285297	22	0.8636363636363636	87.26988537686697	102	0.8921568627450981	1.9206145966709347	39	0	methylated (>=50%)	O93610	DNA polymerase delta subunit 2 (XlCdc1)	DNA strand elongation involved in DNA replication [GO:0006271]	hit with GO BP
GN018382	Chromosome_3A	19480	9	376	35.272073921971256	0.6207712518010001	65.43058713777623	339	0.504424778761062	92.12701174423663	34	0.9705882352941176	61.2981416644223	305	0.4524590163934426	63.868728305459136	53	0.7358490566037735	methylated (>=50%)	Q567G6	Nucleolus and neural progenitor protein	negative regulation of neuron differentiation [GO:0045665]; positive regulation of Notch signaling pathway [GO:0045747]; RNA processing [GO:0006396]	hit with GO BP
GN018383	Chromosome_3A	19152	15	328	35.8030492898914	0.5348399785446093	83.60305979081022	312	0.8910256410256411	90.65062875888464	35	1	82.86174373130895	277	0.8772563176895307	54.21221864951769	24	0.5833333333333334	methylated (>=50%)	P14408	Fumarate hydratase, mitochondrial (Fumarase) (EC 4.2.1.2)	arginine metabolic process [GO:0006525]; DNA damage response [GO:0006974]; fumarate metabolic process [GO:0006106]; malate metabolic process [GO:0006108]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; tricarboxylic acid cycle [GO:0006099]; urea cycle [GO:0000050]	hit with GO BP
GN018384	Chromosome_3A	8630	10	251	36.848203939745076	0.8583454423046976	0.5620170166263367	250	0	0.47337278106508873	65	0	0.5937864489449687	185	0	0.4728992360858494	39	0	unmethylated (<10%)	Q0VAA2	Leucine-rich repeat-containing protein 74A (Leucine-rich repeat-containing protein 74)	NA	hit, no GO BP
GN018385	Chromosome_3A	831	1	36	56.31768953068592	0.5463909994155465	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5390835579514824	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018387	Chromosome_3A	1320	1	63	45.75757575757576	0.9122922494651966	0.2824858757062147	51	0	0.2824858757062147	51	0	NA	NA	NA	3.4712482468443198	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018386	Chromosome_3A	2031	4	24	37.813884785819795	0.3406289308176101	59.93150684931507	24	0.5833333333333334	32.53796095444685	10	0.3	77.7934936350778	14	0.7857142857142857	44.48468883766875	51	0.4117647058823529	methylated (>=50%)	Q32PA9	Peptidyl-prolyl cis-trans isomerase FKBP2 (PPIase FKBP2) (EC 5.2.1.8) (FK506-binding protein 2) (FKBP-2) (Rotamase)	NA	hit, no GO BP
GN018388	Chromosome_3A	4962	4	68	36.01370415155179	0.4226681698609545	91.52858809801634	68	1	97.07927677329624	10	1	90.40942232192933	58	1	95.83916083916084	62	1	methylated (>=50%)	Q568K5	N-alpha-acetyltransferase 40 (EC 2.3.1.257) (N-acetyltransferase 11) (N-alpha-acetyltransferase D) (NatD)	NA	hit, no GO BP
GN018389	Chromosome_3A	64363	34	629	36.137221695694734	0.3002853652179758	78.12165218426378	620	0.8435483870967742	88.26616999661361	129	0.9612403100775194	75.95855296411293	491	0.8126272912423625	41.943957968476354	15	0.3333333333333333	methylated (>=50%)	Q6DFF9	Mitogen-activated protein kinase-binding protein 1	negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; positive regulation of JNK cascade [GO:0046330]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN018390	Chromosome_3A	915	1	32	43.387978142076506	0.7489257213014119	68.801191362621	32	0.71875	68.801191362621	32	0.71875	NA	NA	NA	3.4508627156789196	55	0	methylated (>=50%)	Q9GZT9	Egl nine homolog 1 (EC 1.14.11.29) (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-PH2) (HIF-prolyl hydroxylase 2) (HPH-2) (Prolyl hydroxylase domain-containing protein 2) (PHD2) (SM-20)	cellular response to hypoxia [GO:0071456]; intracellular iron ion homeostasis [GO:0006879]; intracellular oxygen homeostasis [GO:0032364]; negative regulation of hypoxia-inducible factor-1alpha signaling pathway [GO:1902072]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of angiogenesis [GO:0045765]; regulation of modification of postsynaptic structure [GO:0099159]; regulation of neuron apoptotic process [GO:0043523]; regulation protein catabolic process at postsynapse [GO:0140252]; response to hypoxia [GO:0001666]; response to nitric oxide [GO:0071731]	hit with GO BP
GN018391	Chromosome_3A	8481	7	110	36.375427426011086	0.3921279343078211	86.73974067638017	110	0.9727272727272728	93.93939393939394	12	1	86.08112051356872	98	0.9693877551020408	68.1551116333725	17	0.8235294117647058	methylated (>=50%)	Q9H6Z9	Prolyl hydroxylase EGLN3 (EC 1.14.11.-) (Egl nine homolog 3) (EC 1.14.11.29) (HPH-1) (Hypoxia-inducible factor prolyl hydroxylase 3) (HIF-PH3) (HIF-prolyl hydroxylase 3) (HPH-3) (Prolyl hydroxylase domain-containing protein 3) (PHD3)	cellular response to hypoxia [GO:0071456]; negative regulation of ferroptosis [GO:0110076]; protein hydroxylation [GO:0018126]; protein stabilization [GO:0050821]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN018392	Chromosome_3A	16809	16	223	36.24843833660539	0.4055084965792992	85.60750912567356	223	0.9775784753363229	93.47442680776014	36	1	84.24273329933708	187	0.9732620320855615	52.02863961813843	9	0.5555555555555556	methylated (>=50%)	Q07130	UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)	glycogen biosynthetic process [GO:0005978]; glycogen metabolic process [GO:0005977]; UDP-alpha-D-glucose metabolic process [GO:0006011]	hit with GO BP
GN018393	Chromosome_3A	14379	17	177	34.077474094165105	0.4285012927858057	90.64106031917771	177	0.9265536723163842	85.6	33	0.8181818181818182	91.37303492604352	144	0.9513888888888888	1.3071895424836601	43	0	methylated (>=50%)	Q86TJ2	Transcriptional adapter 2-beta (ADA2-like protein beta) (ADA2-beta)	chromatin remodeling [GO:0006338]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA repair [GO:0006282]; regulation of RNA splicing [GO:0043484]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN018394	Chromosome_3A	12020	8	161	34.78369384359401	0.4510598585114992	90.54220326470347	161	0.9937888198757764	92.29957805907173	23	1	90.39402294761184	138	0.9927536231884058	23.855198019801982	59	0.23728813559322035	methylated (>=50%)	Q5ZME2	Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic malate dehydrogenase)	gluconeogenesis [GO:0006094]; malate metabolic process [GO:0006108]	hit with GO BP
GN018395	Chromosome_3A	1833	3	34	39.87997817785052	0.46845262255896813	35.559006211180126	34	0.4117647058823529	17.46031746031746	24	0.20833333333333334	74.8768472906404	10	0.9	41.77746675997201	24	0.4166666666666667	sparse (10-50%)	Q6P9U1	Uridine diphosphate glucose pyrophosphatase NUDT22 (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 22) (Nudix motif 22)	NA	hit, no GO BP
GN018396	Chromosome_3A	2299	5	25	34.97172683775555	0.3588598901098901	58.442453480358374	25	0.64	44.78827361563518	13	0.5384615384615384	68.45878136200717	12	0.75	25.208466966003847	38	0.2894736842105263	methylated (>=50%)	Q2KIU7	Radial spoke head protein 9 homolog	axoneme assembly [GO:0035082]; cilium movement involved in cell motility [GO:0060294]; motile cilium assembly [GO:0044458]	hit with GO BP
GN018397	Chromosome_3A	558	1	9	42.473118279569896	0.3587142857142857	0.2898550724637681	9	0	0.2898550724637681	9	0	NA	NA	NA	1.4717906786590351	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018398	Chromosome_3A	18044	6	425	36.26690312569275	0.7164545277885737	0.5878510777269759	387	0	0.827300930713547	18	0	0.5765378414032345	369	0	0.743006993006993	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018399	Chromosome_3A	567	1	29	46.91358024691358	0.9371900826446281	0.75642965204236	29	0	0.75642965204236	29	0	NA	NA	NA	1.2481426448736999	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018400	Chromosome_3A	2148	1	53	38.03538175046555	0.6822235006472026	0.7894736842105263	53	0	0.7894736842105263	53	0	NA	NA	NA	0.5105296745373324	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018401	Chromosome_3A	1569	1	43	37.8585086042065	0.764992686494393	0.8662175168431184	43	0	0.8662175168431184	43	0	NA	NA	NA	0.3646677471636953	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011487	Chromosome_3A	377	1	3	43.236074270557026	0.17214611872146118	16.3265306122449	3	0	16.3265306122449	3	0	NA	NA	NA	3.3112582781456954	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011485	Chromosome_3A	620	2	10	40.96774193548387	0.38526067234201206	1.6326530612244898	10	0	0	7	0	3.225806451612903	3	0	4.193254329990884	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018402	Chromosome_3A	597	1	30	47.06867671691792	0.9092293633871459	0.3590664272890485	30	0	0.3590664272890485	30	0	NA	NA	NA	0.7604562737642585	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018403	Chromosome_3A	213	1	9	43.66197183098591	1.1576086956521738	0.5730659025787965	9	0	0.5730659025787965	9	0	NA	NA	NA	6.782608695652174	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018404	Chromosome_3A	567	1	29	47.44268077601411	0.9135	0.7952286282306164	27	0	0.7952286282306164	27	0	NA	NA	NA	0.938337801608579	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018405	Chromosome_3A	1779	1	64	39.516582349634625	0.9217467333754311	0.7215007215007215	38	0	0.7215007215007215	38	0	NA	NA	NA	0	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003115	Chromosome_3A	581	1	6	40.963855421686745	0.24962406015037594	4.3478260869565215	5	0	4.3478260869565215	5	0	NA	NA	NA	0.4568817818389492	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018406	Chromosome_3A	2319	3	18	36.222509702457955	0.23664472677177406	0.7623888182973316	18	0	0.6396588486140725	12	0	0.9433962264150944	6	0	0.42789223454833597	60	0	unmethylated (<10%)	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN018407	Chromosome_3A	1839	2	25	33.22457857531267	0.4934316440208642	1.364877161055505	21	0	1.36986301369863	16	0	1.3605442176870748	5	0	3.35195530726257	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018408	Chromosome_3A	552	1	15	44.02173913043478	0.5613559322033899	1.1235955056179776	15	0	1.1235955056179776	15	0	NA	NA	NA	0.3784295175023652	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018409	Chromosome_3A	732	2	19	43.98907103825137	0.623090363334976	0.5571030640668524	17	0	0.6144393241167435	16	0	0	1	0	1.9808306709265175	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018410	Chromosome_3A	465	1	10	47.74193548387097	0.46875	0	10	0	0	10	0	NA	NA	NA	0.4077933846850929	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018411	Chromosome_3A	507	1	13	42.603550295857985	0.5794285714285714	0.19011406844106463	13	0	0.19011406844106463	13	0	NA	NA	NA	0.5714285714285714	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018412	Chromosome_3A	1607	2	35	38.51897946484132	0.5872066315877391	0.8830022075055187	23	0	0.8793969849246231	21	0	0.9090909090909091	2	0	1.429275505174963	65	0	unmethylated (<10%)	Q9P6I3	Putative mannan endo-1,6-alpha-mannosidase C1198.07c (EC 3.2.1.101) (Endo-alpha-1->6-D-mannanase C1198.07c)	carbohydrate catabolic process [GO:0016052]; fungal-type cell wall biogenesis [GO:0009272]; septum digestion after cytokinesis [GO:0000920]	hit with GO BP
GN018413	Chromosome_3A	3147	2	95	38.67175087384811	0.8077602697532665	0.34629728289824185	82	0	0.2597402597402597	19	0	0.36863270777479895	63	0	0.5285013212533032	65	0	unmethylated (<10%)	Q9P6I3	Putative mannan endo-1,6-alpha-mannosidase C1198.07c (EC 3.2.1.101) (Endo-alpha-1->6-D-mannanase C1198.07c)	carbohydrate catabolic process [GO:0016052]; fungal-type cell wall biogenesis [GO:0009272]; septum digestion after cytokinesis [GO:0000920]	hit with GO BP
GN018414	Chromosome_3A	4044	15	89	35.361028684470824	0.7047558625875276	0.6116207951070336	89	0	0.5149662053427744	61	0	0.778642936596218	28	0	0.5689277899343544	42	0	unmethylated (<10%)	O35379	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	amygdala development [GO:0021764]; amyloid-beta clearance [GO:0097242]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of lipid antigen via MHC class Ib [GO:0048003]; apoptotic process [GO:0006915]; astrocyte differentiation [GO:0048708]; bilirubin transport [GO:0015723]; blood vessel diameter maintenance [GO:0097746]; carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cell redox homeostasis [GO:0045454]; cellular response to amyloid-beta [GO:1904646]; cellular response to type II interferon [GO:0071346]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; defense response to Gram-positive bacterium [GO:0050830]; DNA damage response [GO:0006974]; endothelial cell apoptotic process [GO:0072577]; endothelium development [GO:0003158]; exploration behavior [GO:0035640]; export across plasma membrane [GO:0140115]; export from cell [GO:0140352]; fibroblast apoptotic process [GO:0044346]; gene expression [GO:0010467]; glial cell differentiation [GO:0010001]; glucocorticoid metabolic process [GO:0008211]; glutathione metabolic process [GO:0006749]; glutathione transmembrane transport [GO:0034775]; glutathione transport [GO:0034635]; granuloma formation [GO:0002432]; hippocampus development [GO:0021766]; hydrogen peroxide biosynthetic process [GO:0050665]; immune response [GO:0006955]; inflammatory response [GO:0006954]; inflammatory response to antigenic stimulus [GO:0002437]; intracellular chemical homeostasis [GO:0055082]; intracellular nitrogen homeostasis [GO:0141067]; leukotriene biosynthetic process [GO:0019370]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; long-chain fatty acid import across plasma membrane [GO:0015911]; lymphocyte migration [GO:0072676]; macrophage activation [GO:0042116]; memory [GO:0007613]; multicellular organism growth [GO:0035264]; neural tissue regeneration [GO:0097719]; neurogenesis [GO:0022008]; NK T cell activation [GO:0051132]; phospholipid efflux [GO:0033700]; phospholipid translocation [GO:0045332]; pigment accumulation [GO:0043476]; positive regulation of cell migration [GO:0030335]; positive regulation of inflammatory response [GO:0050729]; protein localization to cell surface [GO:0034394]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of catalytic activity [GO:0050790]; regulation of cellular response to drug [GO:2001038]; regulation of membrane potential [GO:0042391]; response to fluid shear stress [GO:0034405]; response to glucocorticoid [GO:0051384]; response to oxidative stress [GO:0006979]; response to toxic substance [GO:0009636]; response to type II interferon [GO:0034341]; response to xenobiotic stimulus [GO:0009410]; sphingolipid translocation [GO:0099039]; superoxide anion generation [GO:0042554]; tetrahydrobiopterin metabolic process [GO:0046146]; tissue homeostasis [GO:0001894]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; vasodilation [GO:0042311]; xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN018415	Chromosome_3A	2235	7	46	34.317673378076066	0.7008562157445533	0.625229863920559	46	0	0.8365508365508365	31	0	0.34334763948497854	15	0	0.630119722747322	37	0	unmethylated (<10%)	O35379	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	amygdala development [GO:0021764]; amyloid-beta clearance [GO:0097242]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of lipid antigen via MHC class Ib [GO:0048003]; apoptotic process [GO:0006915]; astrocyte differentiation [GO:0048708]; bilirubin transport [GO:0015723]; blood vessel diameter maintenance [GO:0097746]; carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cell redox homeostasis [GO:0045454]; cellular response to amyloid-beta [GO:1904646]; cellular response to type II interferon [GO:0071346]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; defense response to Gram-positive bacterium [GO:0050830]; DNA damage response [GO:0006974]; endothelial cell apoptotic process [GO:0072577]; endothelium development [GO:0003158]; exploration behavior [GO:0035640]; export across plasma membrane [GO:0140115]; export from cell [GO:0140352]; fibroblast apoptotic process [GO:0044346]; gene expression [GO:0010467]; glial cell differentiation [GO:0010001]; glucocorticoid metabolic process [GO:0008211]; glutathione metabolic process [GO:0006749]; glutathione transmembrane transport [GO:0034775]; glutathione transport [GO:0034635]; granuloma formation [GO:0002432]; hippocampus development [GO:0021766]; hydrogen peroxide biosynthetic process [GO:0050665]; immune response [GO:0006955]; inflammatory response [GO:0006954]; inflammatory response to antigenic stimulus [GO:0002437]; intracellular chemical homeostasis [GO:0055082]; intracellular nitrogen homeostasis [GO:0141067]; leukotriene biosynthetic process [GO:0019370]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; long-chain fatty acid import across plasma membrane [GO:0015911]; lymphocyte migration [GO:0072676]; macrophage activation [GO:0042116]; memory [GO:0007613]; multicellular organism growth [GO:0035264]; neural tissue regeneration [GO:0097719]; neurogenesis [GO:0022008]; NK T cell activation [GO:0051132]; phospholipid efflux [GO:0033700]; phospholipid translocation [GO:0045332]; pigment accumulation [GO:0043476]; positive regulation of cell migration [GO:0030335]; positive regulation of inflammatory response [GO:0050729]; protein localization to cell surface [GO:0034394]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of catalytic activity [GO:0050790]; regulation of cellular response to drug [GO:2001038]; regulation of membrane potential [GO:0042391]; response to fluid shear stress [GO:0034405]; response to glucocorticoid [GO:0051384]; response to oxidative stress [GO:0006979]; response to toxic substance [GO:0009636]; response to type II interferon [GO:0034341]; response to xenobiotic stimulus [GO:0009410]; sphingolipid translocation [GO:0099039]; superoxide anion generation [GO:0042554]; tetrahydrobiopterin metabolic process [GO:0046146]; tissue homeostasis [GO:0001894]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; vasodilation [GO:0042311]; xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN018416	Chromosome_3A	1865	7	39	36.56836461126005	0.6288908487238016	0.5473453749315819	39	0	0.4750593824228028	28	0	0.7092198581560284	11	0	0.37262872628726285	57	0	unmethylated (<10%)	O88563	ATP-binding cassette sub-family C member 3 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (Canalicular multispecific organic anion transporter 2) (MRP-like protein 2) (MLP-2) (Multidrug resistance-associated protein 3)	bile acid and bile salt transport [GO:0015721]; canalicular bile acid transport [GO:0015722]; leukotriene transport [GO:0071716]; monoatomic anion transmembrane transport [GO:0098656]; response to estradiol [GO:0032355]; response to lipopolysaccharide [GO:0032496]; response to tetrachloromethane [GO:1904772]; transmembrane transport [GO:0055085]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN018417	Chromosome_3A	9517	6	210	33.7606388567826	0.7748089117155843	6.381733021077284	210	0.014285714285714285	14.186369958275382	51	0.058823529411764705	4.301075268817204	159	0	1.9857433808553973	40	0	unmethylated (<10%)	A0A0R3K2G2	Glycerol 3-phosphate dehydrogenase (EC 1.1.99.-)	glycerol catabolic process [GO:0019563]	hit with GO BP
GN018439	Chromosome_3A	6280	6	101	36.62420382165605	0.4805894244261992	65.3986675263271	99	0.7070707070707071	65.5937052932761	35	0.8	65.31490015360983	64	0.65625	3.0131826741996233	37	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018438	Chromosome_3A	3356	4	103	40.97139451728248	0.7363035291310942	0.9536784741144414	103	0	1.0627356873500171	92	0	0.5312084993359893	11	0	0.4121283485428319	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018437	Chromosome_3A	2120	2	58	43.160377358490564	0.596239077516899	0.8828250401284109	53	0	0.9514747859181731	51	0	0.5128205128205128	2	0	0.5577689243027888	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018436	Chromosome_3A	1290	1	44	50.775193798449614	0.5437094085867004	0.7598784194528876	44	0	0.7598784194528876	44	0	NA	NA	NA	0.7898894154818326	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011845	Chromosome_3A	270	1	8	42.592592592592595	0.6533575317604355	0.5698005698005698	8	0	0.5698005698005698	8	0	NA	NA	NA	0.554675118858954	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018435	Chromosome_3A	345	1	18	52.46376811594203	0.7587976539589443	0.5571030640668524	18	0	0.5571030640668524	18	0	NA	NA	NA	0.47581284694686754	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018434	Chromosome_3A	510	2	20	42.94117647058823	0.8601787822567043	0.5911330049261084	20	0	0.7363770250368189	15	0	0.2976190476190476	5	0	0.5907172995780591	19	0	unmethylated (<10%)	P55013	Solute carrier family 12 member 2 (Bumetanide-sensitive sodium-(potassium)-chloride cotransporter 2) (BSC2) (Na-K-2Cl cotransporter 1) (NKCC1) (Na-K-CL symporter)	cell volume homeostasis [GO:0006884]; chloride ion homeostasis [GO:0055064]; inorganic cation import across plasma membrane [GO:0098659]; potassium ion homeostasis [GO:0055075]; potassium ion import across plasma membrane [GO:1990573]; sodium ion homeostasis [GO:0055078]	hit with GO BP
GN018433	Chromosome_3A	750	1	38	48.13333333333333	0.876275980814168	0.32653061224489793	38	0	0.32653061224489793	38	0	NA	NA	NA	0.6255212677231026	86	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018432	Chromosome_3A	345	1	17	52.7536231884058	0.7090183752417795	0	17	0	0	17	0	NA	NA	NA	0.6082289803220036	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020437	Chromosome_3A	278	1	2	48.56115107913669	0.12203687445127305	4.166666666666667	2	0	4.166666666666667	2	0	NA	NA	NA	5.2301255230125525	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018431	Chromosome_3A	38262	22	509	34.42841461502274	0.45095354951228445	74.02123949912823	505	0.8871287128712871	77.62757688408246	53	0.8679245283018868	73.71543201031666	452	0.8893805309734514	0.7964319847085058	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018430	Chromosome_3A	1125	1	26	40.44444444444444	0.5663555744878597	1.1004126547455295	26	0	1.1004126547455295	26	0	NA	NA	NA	0.7424144609425436	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018429	Chromosome_3A	1326	1	58	40.19607843137255	1.089317583071301	0.4341534008683068	58	0	0.4341534008683068	58	0	NA	NA	NA	0.9063444108761329	54	0	unmethylated (<10%)	Q949V6	Probable E3 ubiquitin-protein ligase ARI1 (EC 2.3.2.31) (ARIADNE-like protein ARI1) (Protein ariadne homolog 1) (RING-type E3 ubiquitin transferase ARI1)	protein ubiquitination [GO:0016567]	hit with GO BP
GN018428	Chromosome_3A	3884	2	105	38.1307929969104	0.7437627662678727	0.5920663114268798	43	0	0.8620689655172413	20	0	0.4508566275924256	23	0	3.8907498067508373	78	0	unmethylated (<10%)	A2XJR0	Ring-type E3 ubiquitin ligase 454 (OsRING454) (RBR-type E3 ubiquitin transferase) (OsRBRL) (EC 2.3.2.31)	protein ubiquitination [GO:0016567]	hit with GO BP
GN018427	Chromosome_3A	1275	1	8	38.509803921568626	0.16991504247876063	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018426	Chromosome_3A	1662	2	49	41.03489771359808	0.7003792667509482	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018425	Chromosome_3A	2842	2	84	40.49964813511612	0.720862396956246	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	A2XJR0	Ring-type E3 ubiquitin ligase 454 (OsRING454) (RBR-type E3 ubiquitin transferase) (OsRBRL) (EC 2.3.2.31)	protein ubiquitination [GO:0016567]	hit with GO BP
GN018424	Chromosome_3A	1275	1	8	38.509803921568626	0.16991504247876063	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018423	Chromosome_3A	1662	2	49	41.03489771359808	0.7003792667509482	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018422	Chromosome_3A	2842	2	81	40.49964813511612	0.6950963222416813	1.791044776119403	20	0	1.791044776119403	20	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	A2XJR0	Ring-type E3 ubiquitin ligase 454 (OsRING454) (RBR-type E3 ubiquitin transferase) (OsRBRL) (EC 2.3.2.31)	protein ubiquitination [GO:0016567]	hit with GO BP
GN018421	Chromosome_3A	11014	2	175	34.84655892500454	0.5264047656502626	68.86060847086895	164	0.8475609756097561	42.2192151556157	18	0.3888888888888889	70.97328039489216	146	0.9041095890410958	68.88888888888889	22	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018420	Chromosome_3A	1821	1	38	39.64854475562878	0.5346736619250354	21.794871794871796	9	0.3333333333333333	21.794871794871796	9	0.3333333333333333	NA	NA	NA	28.031212484993997	56	0.35714285714285715	sparse (10-50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN018419	Chromosome_3A	447	1	8	45.41387024608501	0.3685837971552257	1.1173184357541899	8	0	1.1173184357541899	8	0	NA	NA	NA	6.948356807511737	33	0.09090909090909091	unmethylated (<10%)	Q8K4Q6	Endonuclease 8-like 1 (EC 3.2.2.-) (EC 4.2.99.18) (DNA glycosylase/AP lyase Neil1) (DNA-(apurinic or apyrimidinic site) lyase Neil1) (Endonuclease VIII-like 1) (Nei homolog 1) (NEH1) (Nei-like protein 1)	base-excision repair [GO:0006284]; DNA repair [GO:0006281]; response to oxidative stress [GO:0006979]	hit with GO BP
GN018418	Chromosome_3A	309	1	10	42.07119741100323	0.7399425287356322	0	10	0	0	10	0	NA	NA	NA	0.8465011286681715	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001759	Chromosome_3A	3854	7	43	30.35806953814219	0.48974971999018857	41.1764705882353	3	0	NA	NA	NA	41.1764705882353	3	0	4.3478260869565215	3	0	NA	Q5ZI27	Nuclear apoptosis-inducing factor 1	homologous chromosome pairing at meiosis [GO:0007129]; meiotic DNA double-strand break processing involved in reciprocal meiotic recombination [GO:0010705]; oogenesis [GO:0048477]; regulation of mitochondrial membrane permeability involved in apoptotic process [GO:1902108]; spermatogenesis [GO:0007283]	hit with GO BP
GN018443	Chromosome_3A	219	1	9	49.31506849315068	0.8257226644323419	0.9478672985781991	9	0	0.9478672985781991	9	0	NA	NA	NA	0.8148148148148148	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018442	Chromosome_3A	265	2	12	46.0377358490566	1.0628342245989304	0	12	0	0	12	0	NA	NA	NA	0.8658008658008658	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018441	Chromosome_3A	192	1	9	54.166666666666664	0.64501679731243	0	9	0	0	9	0	NA	NA	NA	0.4055496264674493	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018468	Chromosome_3A	432	2	26	51.620370370370374	1.1608102521703183	0.7288629737609329	26	0	0.7659574468085106	24	0	0.5076142131979695	2	0	0.8016877637130801	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018467	Chromosome_3A	219	1	9	49.77168949771689	0.815136476426799	0	9	0	0	9	0	NA	NA	NA	0.6259780907668232	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018466	Chromosome_3A	3854	6	43	30.35806953814219	0.48974971999018857	32.69230769230769	3	0	NA	NA	NA	32.69230769230769	3	0	32	8	0	NA	Q5ZI27	Nuclear apoptosis-inducing factor 1	homologous chromosome pairing at meiosis [GO:0007129]; meiotic DNA double-strand break processing involved in reciprocal meiotic recombination [GO:0010705]; oogenesis [GO:0048477]; regulation of mitochondrial membrane permeability involved in apoptotic process [GO:1902108]; spermatogenesis [GO:0007283]	hit with GO BP
GN018465	Chromosome_3A	1068	1	25	47.37827715355805	0.5462356792144026	0.5649717514124294	25	0	0.5649717514124294	25	0	NA	NA	NA	7.75899436497616	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018464	Chromosome_3A	603	1	17	44.776119402985074	0.5629633697622055	0.38684719535783363	17	0	0.38684719535783363	17	0	NA	NA	NA	0.6561679790026247	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018463	Chromosome_3A	1002	1	23	47.405189620758485	0.5380305364897044	0.4048582995951417	19	0	0.4048582995951417	19	0	NA	NA	NA	8.503100088573959	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018462	Chromosome_3A	321	1	9	48.598130841121495	0.4863636363636364	0.5405405405405406	9	0	0.5405405405405406	9	0	NA	NA	NA	0.3441156228492774	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018461	Chromosome_3A	866	2	10	42.609699769053115	0.26155240108728484	1.6018306636155606	10	0	1.7156862745098038	8	0	0	2	0	1.03026400515132	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018460	Chromosome_3A	5059	6	153	37.042893852540026	0.8825155147428537	0.988296488946684	153	0	0.5291005291005291	26	0	1.1006798316607316	127	0	2.1739130434782608	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018459	Chromosome_3A	468	2	12	39.1025641025641	0.7099873577749684	0.7561436672967864	12	0	0.7561436672967864	12	0	NA	NA	NA	1.0161386730424387	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018458	Chromosome_3A	7839	4	202	40.311264191861206	0.6347968942426109	1.108179419525066	129	0	0.5970149253731343	24	0	1.2658227848101267	105	0	0.46094750320102434	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018457	Chromosome_3A	468	2	10	38.888888888888886	0.6197033898305084	0.5689900426742532	10	0	0.5689900426742532	10	0	NA	NA	NA	0.5698607007176023	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018456	Chromosome_3A	471	2	10	39.06581740976645	0.6047765793528506	0.22675736961451248	10	0	0.22675736961451248	10	0	NA	NA	NA	0.49335863377609107	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018455	Chromosome_3A	1209	1	50	43.01075268817204	0.896471949103528	3.1433137986148108	50	0	3.1433137986148108	50	0	NA	NA	NA	1.3192612137203166	59	0	unmethylated (<10%)	Q80UC8	Probable G protein-coupled receptor 139 (G protein-coupled receptor PGR3) (G(q)-coupled orphan receptor GPRg1)	G protein-coupled receptor signaling pathway [GO:0007186]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]	hit with GO BP
GN018454	Chromosome_3A	2169	2	63	35.91516828031351	0.9014962593516209	0.6666666666666666	63	0	0.3856041131105398	21	0	0.744153082919915	42	0	0.36127167630057805	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018453	Chromosome_3A	1110	2	14	34.32432432432432	0.43145094119606864	40.55496264674493	14	0.35714285714285715	40.55496264674493	14	0.35714285714285715	NA	NA	NA	0.41025641025641024	69	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018452	Chromosome_3A	1575	1	64	43.111111111111114	0.8747721947409529	0.49186530457813094	64	0	0.49186530457813094	64	0	NA	NA	NA	0.6802721088435374	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018451	Chromosome_3A	44808	27	600	35.17229066238172	0.43486024844720494	70.79291438211725	571	0.8248686514886164	70.26591458501208	64	0.875	70.8594889891758	507	0.8185404339250493	42.953271028037385	66	0.3181818181818182	methylated (>=50%)	D3YXS5	Kinesin-like protein KIF28 (Kinesin family member 28) (Kinesin-like protein 6)	mitochondrion organization [GO:0007005]; organelle transport along microtubule [GO:0072384]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN018450	Chromosome_3A	8910	7	108	35.08417508417509	0.39447906405303995	87.07101834990895	108	0.9907407407407407	90.08403361344538	11	1	86.79706601466992	97	0.9896907216494846	81.49141630901288	27	0.8888888888888888	methylated (>=50%)	O15315	DNA repair protein RAD51 homolog 2 (R51H2) (RAD51 homolog B) (Rad51B) (RAD51-like protein 1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; reciprocal meiotic recombination [GO:0007131]; supramolecular fiber organization [GO:0097435]	hit with GO BP
GN018449	Chromosome_3A	12343	9	139	36.935915093575304	0.353591962965604	76.65876777251185	139	0.7841726618705036	89.53336240732665	38	0.9473684210526315	71.09183481048463	101	0.7227722772277227	56.96665143901325	31	0.6451612903225806	methylated (>=50%)	Q9H307	Pinin (140 kDa nuclear and cell adhesion-related phosphoprotein) (Desmosome-associated protein) (Domain-rich serine protein) (DRS protein) (DRSP) (Melanoma metastasis clone A protein) (Nuclear protein SDK3) (SR-like protein)	cell adhesion [GO:0007155]; mRNA splicing, via spliceosome [GO:0000398]; mRNA stabilization [GO:0048255]; positive regulation of apoptotic process [GO:0043065]; regulation of mRNA processing [GO:0050684]	hit with GO BP
GN018448	Chromosome_3A	15981	5	224	33.75883862086227	0.4933359058460351	80.41061369700563	224	0.8973214285714286	40.804597701149426	4	0.5	81.4592209373098	220	0.9045454545454545	55	70	0.5142857142857142	methylated (>=50%)	F1QMV3	Trafficking protein particle complex subunit 6b (TRAPP complex subunit 6B)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN018447	Chromosome_3A	4408	9	131	37.31851179673321	0.8535892409984419	0.9958992384299942	131	0	1.241295791704511	71	0	0.7659574468085106	60	0	0.7510729613733905	38	0	unmethylated (<10%)	Q5REV9	Sodium-dependent phosphate transport protein 2B (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (NaPi-2b) (Solute carrier family 34 member 2)	intracellular phosphate ion homeostasis [GO:0030643]; phosphate ion transport [GO:0006817]; sodium-dependent phosphate transport [GO:0044341]	hit with GO BP
GN018446	Chromosome_3A	8205	9	205	37.39183424741012	0.7154959138218825	0.9144418751313853	205	0	0.8409506398537477	82	0	0.94409204897477506	123	0	0.8347978910369068	65	0	unmethylated (<10%)	Q5REV9	Sodium-dependent phosphate transport protein 2B (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (NaPi-2b) (Solute carrier family 34 member 2)	intracellular phosphate ion homeostasis [GO:0030643]; phosphate ion transport [GO:0006817]; sodium-dependent phosphate transport [GO:0044341]	hit with GO BP
GN018445	Chromosome_3A	11219	8	298	37.72172207861663	0.7469547724502308	0.9243067699225581	287	0	0.6349206349206349	70	0	0.9893920848633211	217	0	0.8776458440887971	33	0	unmethylated (<10%)	Q5REV9	Sodium-dependent phosphate transport protein 2B (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (NaPi-2b) (Solute carrier family 34 member 2)	intracellular phosphate ion homeostasis [GO:0030643]; phosphate ion transport [GO:0006817]; sodium-dependent phosphate transport [GO:0044341]	hit with GO BP
GN018444	Chromosome_3A	12038	10	190	36.70875560724373	0.469181225202147	79.91485738612175	170	0.8705882352941177	91.39966273187184	10	1	79.3041606886657	160	0.8625	14.258734655335221	28	0.2857142857142857	methylated (>=50%)	Q58DU5	Proteasome subunit alpha type-3	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN018477	Chromosome_3A	21574	4	292	34.69917493278947	0.45240253260642804	72.89664640125515	246	0.8739837398373984	79.65023847376789	13	0.8461538461538461	72.6070357240251	233	0.8755364806866953	0.6779661016949152	57	0	methylated (>=50%)	B7QK46	Glutaminyl-peptide cyclotransferase (EC 2.3.2.5) (Glutaminyl cyclase) (QC) (Glutaminyl-tRNA cyclotransferase)	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase [GO:0017186]	hit with GO BP
GN018476	Chromosome_3A	29150	22	433	35.0188679245283	0.48591300960049644	90.41413839981432	431	0.9860788863109049	93.20463320463321	26	1	90.28894124168514	405	0.9851851851851852	45.40065021992733	54	0.46296296296296297	methylated (>=50%)	Q9BWT3	Poly(A) polymerase gamma (PAP-gamma) (EC 2.7.7.19) (Neo-poly(A) polymerase) (Neo-PAP) (Polynucleotide adenylyltransferase gamma) (SRP RNA 3'-adenylating enzyme) (Signal recognition particle RNA-adenylating enzyme) (SRP RNA-adenylating enzyme)	co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway [GO:0180010]	hit with GO BP
GN018475	Chromosome_3A	7136	5	71	36.04260089686099	0.3063779558032432	88.26516974071104	69	0.9855072463768116	89.5093062605753	10	1	88.03174603174604	59	0.9830508474576272	94.0990516332982	10	1	methylated (>=50%)	Q5FVJ6	Seipin (Bernardinelli-Seip congenital lipodystrophy type 2 protein homolog)	adipose tissue development [GO:0060612]; cytosolic lipolysis [GO:0061725]; fat cell differentiation [GO:0045444]; lipid droplet formation [GO:0140042]; lipid droplet organization [GO:0034389]; lipid storage [GO:0019915]; negative regulation of catalytic activity [GO:0043086]; negative regulation of lipid catabolic process [GO:0050995]; positive regulation of cold-induced thermogenesis [GO:0120162]; regulation of phosphatidic acid biosynthetic process [GO:1905693]; spermatid differentiation [GO:0048515]	hit with GO BP
GN018474	Chromosome_3A	10507	6	182	36.423336823070336	0.5227731877651423	77.51715750152029	182	0.8021978021978022	57.05747126436781	52	0.6153846153846154	82.28363324764354	130	0.8769230769230769	51.32669983416252	37	0.4594594594594595	methylated (>=50%)	Q9WVR8	Menin	cellular response to glucose stimulus [GO:0071333]; cellular response to peptide hormone stimulus [GO:0071375]; chromatin remodeling [GO:0006338]; decidualization [GO:0046697]; DNA damage response [GO:0006974]; embryonic skeletal system morphogenesis [GO:0048704]; hemopoiesis [GO:0030097]; leukocyte homeostasis [GO:0001776]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of cell cycle [GO:0045786]; negative regulation of cell cycle G1/S phase transition [GO:1902807]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of JNK cascade [GO:0046329]; negative regulation of organ growth [GO:0046621]; negative regulation of osteoblast differentiation [GO:0045668]; negative regulation of transcription by RNA polymerase II [GO:0000122]; ossification [GO:0001503]; osteoblast development [GO:0002076]; osteoblast fate commitment [GO:0002051]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell differentiation [GO:0045597]; positive regulation of cell division [GO:0051781]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; regulation of activin receptor signaling pathway [GO:0032925]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of type B pancreatic cell proliferation [GO:0061469]; response to gamma radiation [GO:0010332]; response to transforming growth factor beta [GO:0071559]; response to UV [GO:0009411]; roof of mouth development [GO:0060021]; T-helper 2 cell differentiation [GO:0045064]; transcription initiation-coupled chromatin remodeling [GO:0045815]; type B pancreatic cell differentiation [GO:0003309]	hit with GO BP
GN003697	Chromosome_3A	1746	3	14	32.13058419243986	0.31069985001398176	17.755775577557756	13	0	26.60996354799514	8	0	7.22543352601156	5	0	1.6869728209934396	33	0	sparse (10-50%)	Q9H5L6	DNA transposase THAP9 (EC 2.7.7.-) (THAP domain-containing protein 9) (hTh9)	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; DNA transposition [GO:0006313]	hit with GO BP
GN018472	Chromosome_3A	6163	7	172	36.832711341878955	0.8228681258883375	0.644431882419446	172	0	0.4286827747466875	50	0	0.7326007326007326	122	0	1.8155410312273057	61	0	unmethylated (<10%)	P54131	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN018481	Chromosome_3A	360	1	14	37.5	1.1076923076923078	0.41208791208791207	14	0	0.41208791208791207	14	0	NA	NA	NA	7.762557077625571	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018480	Chromosome_3A	671	2	19	41.28166915052161	0.6677666038131155	92.2883487007544	19	0.9473684210526315	88.11074918566776	12	0.9166666666666666	96.71848013816926	7	1	72.8780487804878	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018479	Chromosome_3A	2455	2	44	34.54175152749491	0.6016117983191406	87.57206918641896	36	0.9444444444444444	90.76923076923077	8	1	85.97502401536984	28	0.9285714285714286	26.588750913075238	57	0.3508771929824561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018483	Chromosome_3A	6073	6	125	37.47735880125144	0.5867641920992341	62.37962100031066	85	0.6470588235294118	34.04907975460123	10	0.3	65.57207051503629	75	0.6933333333333334	0.8309098462816784	62	0	methylated (>=50%)	Q2KI79	Ankyrin repeat family A protein 2	regulation of gene expression [GO:0010468]; regulation of protein-containing complex assembly [GO:0043254]	hit with GO BP
GN001003	Chromosome_3A	975	3	24	42.05128205128205	0.5581395348837209	41.05960264900662	6	0.6666666666666666	52.38095238095238	5	0.8	32.95454545454545	1	0	66.68831168831169	36	0.7777777777777778	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018484	Chromosome_3A	708	1	36	46.89265536723164	0.9385771100309324	96.03174603174604	6	1	96.03174603174604	6	1	NA	NA	NA	94.35382685069008	25	1	methylated (>=50%)	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN018485	Chromosome_3A	20417	9	334	36.92511142675222	0.47993382686827335	92.5137614678899	333	0.975975975975976	86.7212369258754	58	0.9482758620689655	93.16361410132136	275	0.9818181818181818	48.78048780487805	33	0.5454545454545454	methylated (>=50%)	Q6P4F7	Rho GTPase-activating protein 11A (Rho-type GTPase-activating protein 11A)	positive regulation of GTPase activity [GO:0043547]; regulation of small GTPase mediated signal transduction [GO:0051056]; signal transduction [GO:0007165]	hit with GO BP
GN018488	Chromosome_3A	7034	6	119	30.13932328689224	0.856829332457102	85.32342242606357	118	0.9576271186440678	61.278195488721806	6	0.6666666666666666	86.37939574046558	112	0.9732142857142857	56.94540428472702	52	0.6923076923076923	methylated (>=50%)	Q9CQ46	Dynein regulatory complex protein 8 (EF-hand calcium-binding domain-containing protein 2)	NA	hit, no GO BP
GN018489	Chromosome_3A	4871	2	96	34.489837815643604	0.6633566171672407	85.61275784364707	96	0.9270833333333334	25.81888246628131	11	0.36363636363636365	91.52380952380952	85	1	72.42565243779082	41	0.6829268292682927	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018491	Chromosome_3A	7549	4	168	33.51437276460458	0.792645	2.6605101143359717	167	0	0.4484304932735426	15	0	2.901023890784983	152	0	0.6618531889290012	64	0	unmethylated (<10%)	P04464	Calmodulin (CaM)	NA	hit, no GO BP
GN018492	Chromosome_3A	53256	22	521	34.49939912873667	0.32939727170725436	45.81655931293612	505	0.48316831683168315	74.74115097519865	94	0.851063829787234	41.13428181641006	411	0.39902676399026765	0.3601108033240997	70	0	sparse (10-50%)	P78504	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)	angiogenesis [GO:0001525]; aorta morphogenesis [GO:0035909]; aortic valve morphogenesis [GO:0003180]; cardiac neural crest cell development involved in outflow tract morphogenesis [GO:0061309]; cardiac right ventricle morphogenesis [GO:0003215]; cardiac septum morphogenesis [GO:0060411]; cell fate determination [GO:0001709]; distal tubule development [GO:0072017]; endocardial cushion cell development [GO:0061444]; endothelial cell differentiation [GO:0045446]; hemopoiesis [GO:0030097]; inner ear development [GO:0048839]; keratinocyte differentiation [GO:0030216]; loop of Henle development [GO:0072070]; myoblast differentiation [GO:0045445]; negative regulation of cell migration [GO:0030336]; negative regulation of cell-cell adhesion [GO:0022408]; negative regulation of cell-matrix adhesion [GO:0001953]; negative regulation of endothelial cell differentiation [GO:0045602]; negative regulation of stem cell differentiation [GO:2000737]; nephron development [GO:0072006]; nervous system development [GO:0007399]; neuronal stem cell population maintenance [GO:0097150]; Notch signaling pathway [GO:0007219]; podocyte development [GO:0072015]; positive regulation of cardiac epithelial to mesenchymal transition [GO:0062043]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pulmonary artery morphogenesis [GO:0061156]; pulmonary valve morphogenesis [GO:0003184]; regulation of cell population proliferation [GO:0042127]; response to muramyl dipeptide [GO:0032495]; T cell mediated immunity [GO:0002456]	hit with GO BP
GN018493	Chromosome_3A	3078	2	67	35.834957764782324	0.67864288534948	71.53311379436516	67	0.7611940298507462	77.56563245823389	7	0.8571428571428571	71.03229641371111	60	0.75	52.71446332366349	31	0.6129032258064516	methylated (>=50%)	Q0II25	Ribonuclease P protein subunit p20 (RNaseP protein p20)	tRNA 5'-leader removal [GO:0001682]; tRNA processing [GO:0008033]	hit with GO BP
GN018494	Chromosome_3A	81839	22	235	33.48770146262784	0.12115385711747448	81.0668447214185	227	0.9295154185022027	83.28254244666957	43	0.9767441860465116	80.61169737077446	184	0.9184782608695652	33.833333333333336	35	0.3142857142857143	methylated (>=50%)	A2RRH5	WD repeat-containing protein 27	NA	hit, no GO BP
GN018495	Chromosome_3A	273	1	7	43.223443223443226	0.559262510974539	9.836065573770492	7	0	9.836065573770492	7	0	NA	NA	NA	16.253101736972706	48	0.25	unmethylated (<10%)	A1L2P2	Small integral membrane protein 12-A	NA	hit, no GO BP
GN018496	Chromosome_3A	5240	4	148	40.0763358778626	0.7085098471649831	1.9529006318207927	143	0	0.6182380216383307	23	0	2.1416083916083917	120	0	0.6699147381242387	64	0	unmethylated (<10%)	Q59E04	Neuroendocrine protein 7B2	neuropeptide signaling pathway [GO:0007218]; positive regulation of proteolysis [GO:0045862]; regulation of hormone secretion [GO:0046883]	hit with GO BP
GN018498	Chromosome_3A	1476	1	60	51.28726287262872	0.6189544310875035	0.6684491978609626	44	0	0.6684491978609626	44	0	NA	NA	NA	8.869814020028612	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018499	Chromosome_3A	477	1	18	42.138364779874216	0.8577422577422578	1.0269576379974326	18	0	1.0269576379974326	18	0	NA	NA	NA	4.060366510959397	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018500	Chromosome_3A	291	1	13	46.391752577319586	0.8358373840035351	0	13	0	0	13	0	NA	NA	NA	0.5238344683080147	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018501	Chromosome_3A	8533	4	173	34.68885503339974	0.673975711089805	83.4192439862543	171	0.9181286549707602	55.968468468468465	15	0.6666666666666666	85.46492111446794	156	0.9423076923076923	53.86037910309755	36	0.5555555555555556	methylated (>=50%)	Q29081	Phosphomevalonate kinase (PMKase) (EC 2.7.4.2)	cholesterol biosynthetic process [GO:0006695]; cholesterol biosynthetic process via desmosterol [GO:0033489]; cholesterol biosynthetic process via lathosterol [GO:0033490]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; geranylgeranyl diphosphate biosynthetic process [GO:0033386]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]; response to cholesterol [GO:0070723]; zymosterol biosynthetic process [GO:0036197]	hit with GO BP
GN018502	Chromosome_3A	9232	7	123	35.008665511265164	0.4371994709880857	91.15993868165559	121	1	93.72937293729373	27	1	90.68923821039903	94	1	82.71375464684014	26	0.9230769230769231	methylated (>=50%)	Q3TX08	tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)	tRNA N2-guanine methylation [GO:0002940]	hit with GO BP
GN018503	Chromosome_3A	426	1	17	48.82629107981221	0.669625520110957	78.25242718446601	16	1	78.25242718446601	16	1	NA	NA	NA	77.03984819734346	23	0.8695652173913043	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018504	Chromosome_3A	12282	9	179	33.10535743364273	0.532296831149688	79.06133913201052	177	0.8983050847457628	65.58105107327906	22	0.7727272727272727	80.94156514557093	155	0.9161290322580645	64.26531259917486	59	0.7627118644067796	methylated (>=50%)	Q6PD74	Alpha- and gamma-adaptin-binding protein p34	NA	hit, no GO BP
GN018512	Chromosome_3A	5974	7	191	37.66320723133579	0.9041294744557358	1.7391304347826086	9	0	1.9047619047619047	8	0	0	1	0	0	3	0	unmethylated (<10%)	Q21565	Putative ammonium transporter 3	ammonium homeostasis [GO:0097272]	hit with GO BP
GN018511	Chromosome_3A	5411	3	82	36.11162446867492	0.46519396099811283	0.4681647940074906	82	0	0.6734006734006734	38	0	0.3472222222222222	44	0	0.33003300330033003	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018510	Chromosome_3A	1468	4	22	32.084468664850135	0.5830865891528851	60.24885396201703	22	0.5909090909090909	60.03649635036496	9	0.5555555555555556	60.36772216547497	13	0.6153846153846154	0.35353535353535354	44	0	methylated (>=50%)	A6NNX1	RIIa domain-containing protein 1	NA	hit, no GO BP
GN018509	Chromosome_3A	18940	7	490	36.51531151003168	0.7763043076750118	3.7976969970648002	443	0.03160270880361174	1.2280701754385965	45	0	4.012723268901395	398	0.035175879396984924	0.8326029798422436	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018508	Chromosome_3A	3588	4	154	40.07803790412486	1.0698482217020313	0.758259613648673	154	0	0.9174311926605505	49	0	0.7090522335145356	105	0	0.5246913580246914	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018507	Chromosome_3A	7028	12	94	35.97040409789414	0.4144556846876519	90.5762830618322	94	0.9680851063829787	96.70750382848392	26	1	88.75766522825346	68	0.9558823529411765	93.19899244332494	26	1	methylated (>=50%)	Q6NZ07	BOS complex subunit ncln (Nicalin-1) (Nicastrin-like protein 1)	determination of left/right asymmetry in lateral mesoderm [GO:0003140]; enteric nervous system development [GO:0048484]; multi-pass transmembrane protein insertion into ER membrane [GO:0160063]; negative regulation of nodal signaling pathway [GO:1900108]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN018506	Chromosome_3A	33032	18	392	37.72402518769678	0.33401805706031057	79.55808980755523	368	0.8858695652173914	87.60469011725293	30	0.9666666666666667	79.0741020603496	338	0.878698224852071	45.084193373166755	52	0.34615384615384615	methylated (>=50%)	A0JM64	KH homology domain-containing protein 4 (Brings lots of money 7) (Pre-mRNA splicing factor protein khdc4)	mRNA splice site recognition [GO:0006376]	hit with GO BP
GN018517	Chromosome_3A	34466	30	459	34.64863923866999	0.4447265187674021	73.34519443738427	457	0.8577680525164114	81.49511359309557	156	0.8846153846153846	70.07934086054318	301	0.8438538205980066	0.5300353356890459	57	0	methylated (>=50%)	Q05973	Sodium channel protein 1 brain (Sodium channel protein I brain)	membrane depolarization during action potential [GO:0086010]; neuronal action potential [GO:0019228]	hit with GO BP
GN018518	Chromosome_3A	7223	4	114	34.777793160736536	0.5239363275933487	85.67832167832168	114	0.9736842105263158	93.45794392523365	4	1	85.43829296424452	110	0.9727272727272728	91.4409534127844	24	1	methylated (>=50%)	Q9Z223	Molybdopterin synthase catalytic subunit (EC 2.8.1.12) (Molybdenum cofactor synthesis protein 2 large subunit) (Molybdenum cofactor synthesis protein 2B) (MOCS2B)	Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; molybdopterin cofactor biosynthetic process [GO:0032324]	hit with GO BP
GN018519	Chromosome_3A	12647	8	218	35.9848185340397	0.5337226972582559	89.04139915873367	218	0.9541284403669725	76.49930264993027	29	0.8275862068965517	90.52570768342	189	0.9735449735449735	74.39423706614276	23	0.8260869565217391	methylated (>=50%)	Q2TBL4	DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) (DNA-directed RNA polymerase III subunit C)	positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; termination of RNA polymerase III transcription [GO:0006386]; transcription initiation at RNA polymerase III promoter [GO:0006384]	hit with GO BP
GN018520	Chromosome_3A	3874	2	59	37.790397521941145	0.4271503191022155	56.516552341186994	59	0.6949152542372882	76.60933660933661	41	0.8780487804878049	25.493171471927162	18	0.2777777777777778	0.9000620732464308	53	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018521	Chromosome_3A	552	1	21	46.73913043478261	0.8972136222910216	1.28992628992629	21	0	1.28992628992629	21	0	NA	NA	NA	0.612088752869166	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018522	Chromosome_3A	330	1	13	47.57575757575758	0.9166666666666666	0.554016620498615	13	0	0.554016620498615	13	0	NA	NA	NA	1.536697247706422	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018523	Chromosome_3A	846	1	19	47.04491725768322	0.4632143165903	1.0382868267358858	19	0	1.0382868267358858	19	0	NA	NA	NA	1.3533834586466165	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018524	Chromosome_3A	678	1	1	47.78761061946903	0.026157407407407407	NA	0	NA	NA	NA	NA	NA	NA	NA	1.6304347826086956	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018948	Chromosome_3A	3786	7	30	32.673005810882195	0.29763214993239206	7.352941176470588	2	0	8.620689655172415	1	0	0	1	0	32.075471698113205	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018525	Chromosome_3A	186	1	10	51.075268817204304	0.8355795148247979	0.5586592178770949	10	0	0.5586592178770949	10	0	NA	NA	NA	0.8807588075880759	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018526	Chromosome_3A	1218	1	70	42.857142857142854	1.2613918806959403	0.9569377990430622	55	0	0.9569377990430622	55	0	NA	NA	NA	0.9821976672805403	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020577	Chromosome_3A	2468	1	39	47.60940032414911	0.27887005649717517	61.952506596306065	39	0.8205128205128205	61.952506596306065	39	0.8205128205128205	NA	NA	NA	76.71707624448645	60	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018534	Chromosome_3A	618	1	14	47.57281553398058	0.40055555555555555	91.2639405204461	14	1	91.2639405204461	14	1	NA	NA	NA	89.94708994708995	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018533	Chromosome_3A	303	1	15	46.53465346534654	0.9394377842083506	94.92099322799098	15	1	94.92099322799098	15	1	NA	NA	NA	40.94570928196147	45	0.37777777777777777	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018532	Chromosome_3A	174	1	0	43.67816091954023	0	NA	0	NA	NA	NA	NA	NA	NA	NA	89.87131589871316	24	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018531	Chromosome_3A	17038	7	366	35.13323159995305	0.6963586027240128	87.42416582406472	364	0.9505494505494505	70.8994708994709	16	0.75	88.10934140669562	348	0.9597701149425287	40.47424366312347	21	0.42857142857142855	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018530	Chromosome_3A	8226	6	96	35.776805251641136	0.3651162210071655	86.68598444410554	96	0.9791666666666666	89.98211091234347	20	1	86.00845743702887	76	0.9736842105263158	89.62264150943396	11	1	methylated (>=50%)	Q5BL29	Zinc transporter ZIP9 (Solute carrier family 39 member 9) (Zrt- and Irt-like protein 9) (ZIP-9)	bicellular tight junction assembly [GO:0070830]; egg activation [GO:0007343]; intracellular zinc ion homeostasis [GO:0006882]; regulation of cellular response to testosterone stimulus [GO:2000654]; regulation of vascular endothelial cell proliferation [GO:1905562]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN018529	Chromosome_3A	210	1	5	45.714285714285715	0.5050505050505051	0.746268656716418	5	0	0.746268656716418	5	0	NA	NA	NA	0.8779631255487269	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018528	Chromosome_3A	46774	17	1280	37.22367127036388	0.7916090816659698	0.8543857399333162	1223	0	0.4592422502870264	88	0	0.8840407382515638	1135	0	0.6646216768916156	56	0	unmethylated (<10%)	Q8NFF2	Sodium/potassium/calcium exchanger 4 (Na(+)/K(+)/Ca(2+)-exchange protein 4) (Solute carrier family 24 member 4)	amelogenesis [GO:0097186]; calcium ion export across plasma membrane [GO:1990034]; calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; cellular response to high light intensity [GO:0071486]; cone photoresponse recovery [GO:0036368]; detection of chemical stimulus involved in sensory perception of smell [GO:0050911]; drinking behavior [GO:0042756]; enamel mineralization [GO:0070166]; intracellular calcium ion homeostasis [GO:0006874]; membrane repolarization [GO:0086009]; negative regulation of calcium-mediated signaling [GO:0050849]; olfactory nerve maturation [GO:0021630]; phototransduction [GO:0007602]; potassium ion transmembrane transport [GO:0071805]; regulation of eating behavior [GO:1903998]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; response to high light intensity [GO:0009644]; response to melanocyte-stimulating hormone [GO:1990680]; response to odorant [GO:1990834]; sensory perception of smell [GO:0007608]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN018527	Chromosome_3A	1768	4	60	36.93438914027149	1.0002828854314003	0.5151843817787418	60	0	0.656624179219776	46	0	0.18198362147406733	14	0	0.6153846153846154	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019108	Chromosome_3A	943	2	28	39.978791092258746	0.7488372093023256	1.163586584531143	28	0	1.2853470437017995	18	0	1.0248901903367496	10	0	0.8688456764584195	44	0	unmethylated (<10%)	P12938	Cytochrome P450 2D3 (EC 1.14.14.1) (CYPIID3) (Cytochrome P450-DB3) (Debrisoquine 4-hydroxylase)	arachidonate metabolic process [GO:0019369]; liver development [GO:0001889]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN018545	Chromosome_3A	576	1	32	40.798611111111114	1.3356521739130436	0.26737967914438504	32	0	0.26737967914438504	32	0	NA	NA	NA	0.5304101838755304	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018544	Chromosome_3A	465	1	18	43.225806451612904	0.8516483516483516	0.6787330316742082	18	0	0.6787330316742082	18	0	NA	NA	NA	5.151793928242871	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018543	Chromosome_3A	1266	1	46	39.81042654028436	0.9222875061368639	0.435052827843381	46	0	0.435052827843381	46	0	NA	NA	NA	0.5040322580645161	42	0	unmethylated (<10%)	P04755	Acetylcholine receptor subunit beta-like 1 (Nicotinic acetylcholine receptor beta 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN018542	Chromosome_3A	1119	1	38	40.75067024128686	0.8279366810101443	0.45146726862302483	38	0	0.45146726862302483	38	0	NA	NA	NA	0.6084311169056932	53	0	unmethylated (<10%)	Q5IS76	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN018541	Chromosome_3A	1260	1	58	43.65079365079365	0.9665516009998809	0.7266629401900503	58	0	0.7266629401900503	58	0	NA	NA	NA	5.6978567694720335	57	0	unmethylated (<10%)	P04758	Acetylcholine receptor subunit beta	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic cation transport [GO:0006812]; monoatomic ion transmembrane transport [GO:0034220]; muscle cell development [GO:0055001]; muscle contraction [GO:0006936]; nervous system process [GO:0050877]; neuromuscular synaptic transmission [GO:0007274]; postsynaptic membrane organization [GO:0001941]; signal transduction [GO:0007165]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN018540	Chromosome_3A	4753	4	86	35.009467704607616	0.5944706224549157	86.30546075085324	83	0.8795180722891566	65.92844974446338	8	0.75	88.16136539953452	75	0.8933333333333333	33.56164383561644	27	0.37037037037037035	methylated (>=50%)	Q6P1K2	Polyamine-modulated factor 1 (PMF-1)	attachment of spindle microtubules to kinetochore [GO:0008608]; chromosome segregation [GO:0007059]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN018539	Chromosome_3A	21906	13	305	35.20040171642472	0.4494748245984392	85.0842332613391	305	0.9377049180327869	82.19339622641509	43	0.8837209302325582	85.44113365039308	262	0.9465648854961832	0.9316770186335404	54	0	methylated (>=50%)	Q8IW19	Aprataxin and PNK-like factor (EC 3.1.-.-) (Apurinic-apyrimidinic endonuclease APLF) (PNK and APTX-like FHA domain-containing protein) (XRCC1-interacting protein 1)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; double-strand break repair via nonhomologous end joining [GO:0006303]; embryo implantation [GO:0007566]; protein localization to chromatin [GO:0071168]; regulation of DNA repair [GO:0006282]; regulation of epithelial to mesenchymal transition [GO:0010717]; single strand break repair [GO:0000012]	hit with GO BP
GN018538	Chromosome_3A	342	1	12	59.35672514619883	0.39836924868957485	85.52036199095022	12	1	85.52036199095022	12	1	NA	NA	NA	94.20352082438815	97	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018537	Chromosome_3A	6563	7	109	35.547767789120826	0.5306617035070983	41.03058693855056	109	0.5137614678899083	93.45238095238095	19	1	34.169523215955124	90	0.4111111111111111	78.9489399820842	47	0.9361702127659575	sparse (10-50%)	Q7QC84	Probable methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) (EC 1.2.1.27) (Malonate-semialdehyde dehydrogenase [acylating])	L-valine catabolic process [GO:0006574]; thymine catabolic process [GO:0006210]	hit with GO BP
GN018554	Chromosome_3A	7153	5	203	37.34097581434363	0.8148122584982251	0.8972174900624645	201	0	0.4299226139294927	43	0	0.9683328971473436	158	0	0.5870841487279843	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018553	Chromosome_3A	4242	6	57	34.842055634134844	0.4431773193155325	90.10566762728146	57	0.9824561403508771	91.74397031539888	17	1	89.53337653920933	40	0.975	1.7537826685006876	50	0.02	methylated (>=50%)	Q9Y5K8	V-type proton ATPase subunit D (V-ATPase subunit D) (V-ATPase 28 kDa accessory protein) (Vacuolar proton pump subunit D)	cellular response to amino acid stimulus [GO:0071230]; cilium assembly [GO:0060271]; endosomal lumen acidification [GO:0048388]; Golgi lumen acidification [GO:0061795]; intracellular pH reduction [GO:0051452]; lysosomal lumen acidification [GO:0007042]; positive regulation of TORC1 signaling [GO:1904263]; protein localization to cilium [GO:0061512]; proton transmembrane transport [GO:1902600]; regulation of macroautophagy [GO:0016241]; synaptic vesicle lumen acidification [GO:0097401]; vacuolar acidification [GO:0007035]	hit with GO BP
GN018552	Chromosome_3A	34355	16	404	36.25964197351186	0.35781885957435927	76.5044502501882	378	0.8994708994708994	77.14769360981803	45	0.9333333333333333	76.42927794263106	333	0.8948948948948949	25.496688741721854	20	0.3	methylated (>=50%)	Q7ZYC4	Long-chain-fatty-acid--CoA ligase ACSBG2 (EC 6.2.1.3) (Acyl-CoA synthetase bubblegum family member 2) (Arachidonate--CoA ligase ACSBG2) (EC 6.2.1.15)	NA	hit, no GO BP
GN018551	Chromosome_3A	3938	5	32	36.312849162011176	0.24813088620705273	68.05555555555556	20	0.7	64.75409836065573	12	0.6666666666666666	71.65178571428571	8	0.75	87.98947022046725	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018550	Chromosome_3A	650	2	17	38.30769230769231	0.7170668397144712	0.3620564808110065	17	0	0.38639876352395675	16	0	0	1	0	7.5065616797900265	39	0.05128205128205128	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018549	Chromosome_3A	21328	10	323	36.252813203300825	0.4634958243995228	76.71486837226549	289	0.8339100346020761	72.5993883792049	37	0.6216216216216216	77.17742489860453	252	0.8650793650793651	0.5822862396567576	56	0	methylated (>=50%)	Q96L92	Sorting nexin-27	endocytic recycling [GO:0032456]; endosomal transport [GO:0016197]; endosome to lysosome transport [GO:0008333]; establishment of natural killer cell polarity [GO:0001770]; intracellular protein transport [GO:0006886]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; regulation of synapse maturation [GO:0090128]; signal transduction [GO:0007165]	hit with GO BP
GN018548	Chromosome_3A	10690	7	116	38.12909260991581	0.2985596406613557	63.23720930232558	115	0.8	76.25476959201643	83	0.9518072289156626	40.701219512195124	32	0.40625	30.017761989342805	21	0.2857142857142857	methylated (>=50%)	O62675	Pro-interleukin-16 [Cleaved into: Interleukin-16 (IL-16) (Lymphocyte chemoattractant factor) (LCF)]	cytokine-mediated signaling pathway [GO:0019221]; induction of positive chemotaxis [GO:0050930]; positive regulation of inflammatory response [GO:0050729]	hit with GO BP
GN018547	Chromosome_3A	2359	3	37	36.837643069097076	0.46299557601926605	69.92215145081387	35	0.8571428571428571	85.87570621468926	27	1	53.90070921985816	8	0.375	14.65149359886202	13	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018546	Chromosome_3A	603	1	25	44.61028192371476	0.8493914807302231	1.8784530386740332	25	0	1.8784530386740332	25	0	NA	NA	NA	0.6109201985490645	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018556	Chromosome_3A	354	1	20	46.89265536723164	1.0535714285714286	0.7936507936507936	20	0	0.7936507936507936	20	0	NA	NA	NA	0.9012875536480687	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018555	Chromosome_3A	624	1	26	47.43589743589744	0.7590175438596491	0.28846153846153844	26	0	0.28846153846153844	26	0	NA	NA	NA	0.4057971014492754	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018610	Chromosome_3A	4982	4	151	45.242874347651544	0.5963487332339792	0.5123339658444023	150	0	0.557194362504097	70	0	0.45065344749887337	80	0	0.7237635705669482	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018611	Chromosome_3A	345	1	25	51.30434782608695	1.105485772878749	1.792573623559539	25	0	1.792573623559539	25	0	NA	NA	NA	1.9935344827586208	36	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN018612	Chromosome_3A	5505	6	137	38.201634877384194	0.6876719898023382	0.9763124199743918	137	0	1.13464447806354	38	0	0.9338205440519691	99	0	1.0943396226415094	45	0	unmethylated (<10%)	A5PJS2	3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.1.22) (SR type 1) (Steroid 5-alpha-reductase 1) (S5AR 1)	androgen biosynthetic process [GO:0006702]; male gonad development [GO:0008584]	hit with GO BP
GN018613	Chromosome_3A	324	1	14	50.617283950617285	0.6746987951807228	0.6514657980456026	14	0	0.6514657980456026	14	0	NA	NA	NA	0.8009153318077803	67	0	unmethylated (<10%)	P0DMQ5	Putative transmembrane protein INAFM2 (InaF-motif-containing protein 2) (Osteogenesis up-regulated transcript 1)	NA	hit, no GO BP
GN018614	Chromosome_3A	466	2	13	46.78111587982833	0.5133898305084745	0	13	0	0	13	0	NA	NA	NA	0.43699927166788055	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018615	Chromosome_3A	1332	1	45	39.86486486486486	0.852219410242557	0.5157962604771116	45	0	0.5157962604771116	45	0	NA	NA	NA	0.45718304905925794	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018616	Chromosome_3A	807	1	25	39.77695167286245	0.7841041585697629	0.7567567567567568	25	0	0.7567567567567568	25	0	NA	NA	NA	1.1218765935747068	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018617	Chromosome_3A	786	2	29	39.31297709923664	0.9612043518596609	0.39643211100099107	29	0	0.39643211100099107	29	0	NA	NA	NA	0.5245410266017235	63	0	unmethylated (<10%)	P22122	Ras-like GTP-binding protein O-RHO (EC 3.6.5.2)	small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN018618	Chromosome_3A	939	1	26	37.912673056443026	0.7785076530612245	0.3005259203606311	26	0	0.3005259203606311	26	0	NA	NA	NA	0.869894099848714	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018619	Chromosome_3A	633	1	7	37.7567140600316	0.3104245481294662	1.5151515151515151	5	0	1.5151515151515151	5	0	NA	NA	NA	0.5347593582887701	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018620	Chromosome_3A	417	1	8	39.328537170263786	0.4997752808988764	0	8	0	0	8	0	NA	NA	NA	0.6298110566829951	28	0	unmethylated (<10%)	P0CT33	ATP-dependent DNA helicase tlh1 (EC 5.6.2.4) (DNA 3'-5' helicase tlh1) (Sub-telomeric helicase RecQ homolog 1) (Telomere-linked helicase 1)	telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN018621	Chromosome_3A	999	3	26	39.63963963963964	0.6628049402878432	0.46253469010175763	26	0	0.4775549188156638	25	0	0	1	0	0.2795527156549521	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018622	Chromosome_3A	1903	5	25	34.36678928008408	0.44492139644062884	0.2717391304347826	24	0	0.4781420765027322	15	0	0	9	0	0.4191114836546521	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018623	Chromosome_3A	5587	5	163	35.31412206908896	0.937130573300843	0.5742591618446432	158	0	0.6774361646690985	59	0	0.5219344608879493	99	0	0.691625319500827	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018624	Chromosome_3A	2872	6	62	36.420612813370475	0.6599656051710846	0.723410804986917	62	0	0.9002770083102493	29	0	0.5818786367414797	33	0	6.829896907216495	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018626	Chromosome_3A	5982	6	158	36.74356402540956	0.7903170780654224	0.9397798936564857	156	0	0.9385665529010239	25	0	0.9399855386840202	131	0	1.1823035850495804	72	0	unmethylated (<10%)	Q9VR91	Probable E3 ubiquitin-protein ligase HERC2 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 2) (HECT-type E3 ubiquitin transferase HERC2)	protein ubiquitination [GO:0016567]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN018627	Chromosome_3A	252	1	8	39.285714285714285	0.8235294117647058	0.5249343832020997	8	0	0.5249343832020997	8	0	NA	NA	NA	0.5322294500295683	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018629	Chromosome_3A	11299	10	127	32.70200902734755	0.42203275976972754	71.54429056702378	125	0.88	87.75337837837837	18	0.9444444444444444	69.68048946295038	107	0.8691588785046729	51.27887788778878	39	0.41025641025641024	methylated (>=50%)	Q3U3Q1	Serine/threonine-protein kinase ULK3 (EC 2.7.11.1) (Unc-51-like kinase 3)	autophagosome assembly [GO:0000045]; fibroblast activation [GO:0072537]; mitophagy [GO:0000423]; negative regulation of smoothened signaling pathway [GO:0045879]; piecemeal microautophagy of the nucleus [GO:0034727]; positive regulation of smoothened signaling pathway [GO:0045880]; protein autophosphorylation [GO:0046777]; regulation of autophagy [GO:0010506]; response to starvation [GO:0042594]; reticulophagy [GO:0061709]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN018630	Chromosome_3A	5891	7	56	37.03955185876761	0.2773407583205338	63.5409377186844	56	0.8035714285714286	62.066473988439306	33	0.7878787878787878	64.92537313432835	23	0.8260869565217391	17.81786185657721	43	0.18604651162790697	methylated (>=50%)	A6QQM4	Zinc finger protein 474	NA	hit, no GO BP
GN018631	Chromosome_3A	1215	2	45	45.4320987654321	0.7211633581745037	0.1145475372279496	41	0	0.15151515151515152	35	0	0	6	0	0.6955422067657288	76	0	unmethylated (<10%)	P86964	BPTI/Kunitz domain-containing protein 3 (Nacre serine protease inhibitor 2) (NSPI2)	NA	hit, no GO BP
GN018632	Chromosome_3A	1015	2	36	44.33497536945813	0.7218348116394382	0.5107252298263534	36	0	0.5611672278338945	33	0	0	3	0	0.33695245226506926	75	0	unmethylated (<10%)	P86964	BPTI/Kunitz domain-containing protein 3 (Nacre serine protease inhibitor 2) (NSPI2)	NA	hit, no GO BP
GN018633	Chromosome_3A	2313	2	66	42.84479031560743	0.6331782096906652	0.7394366197183099	66	0	0.6926952141057935	42	0	0.7987220447284346	24	0	0.43375394321766564	43	0	unmethylated (<10%)	P86964	BPTI/Kunitz domain-containing protein 3 (Nacre serine protease inhibitor 2) (NSPI2)	NA	hit, no GO BP
GN018635	Chromosome_3A	822	1	43	49.87834549878345	0.8455980861244019	0.49680624556423	43	0	0.49680624556423	43	0	NA	NA	NA	0.3775167785234899	43	0	unmethylated (<10%)	Q9DE25	Forkhead box C1-A	adrenal gland development [GO:0030325]; anatomical structure morphogenesis [GO:0009653]; blood vessel development [GO:0001568]; camera-type eye development [GO:0043010]; cartilage development [GO:0051216]; cell differentiation [GO:0030154]; cerebellum vasculature development [GO:0061300]; closure of optic fissure [GO:0061386]; determination of heart left/right asymmetry [GO:0061371]; determination of left/right symmetry [GO:0007368]; determination of liver left/right asymmetry [GO:0071910]; determination of pancreatic left/right asymmetry [GO:0035469]; embryonic retina morphogenesis in camera-type eye [GO:0060059]; heart development [GO:0007507]; motor neuron axon guidance [GO:0008045]; negative regulation of retinoic acid receptor signaling pathway [GO:0048387]; neural crest cell migration [GO:0001755]; pectoral fin development [GO:0033339]; podocyte cell fate commitment [GO:0072149]; podocyte development [GO:0072015]; pronephric glomerulus development [GO:0039021]; regulation of bone mineralization [GO:0030500]; regulation of fibroblast growth factor receptor signaling pathway [GO:0040036]; regulation of Notch signaling pathway [GO:0008593]; regulation of platelet-derived growth factor receptor-alpha signaling pathway [GO:2000583]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of vascular permeability [GO:0043114]; somitogenesis [GO:0001756]; vascular associated smooth muscle cell differentiation [GO:0035886]; vasculature development [GO:0001944]	hit with GO BP
GN018592	Chromosome_3A	3599	3	22	34.78744095582106	0.20379808088295856	50.03825554705432	22	0.45454545454545453	62.301587301587304	4	0.75	47.10900473933649	18	0.3888888888888889	80.43478260869566	11	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018593	Chromosome_3A	240	1	5	43.75	0.5333333333333333	78.7128712871287	5	1	78.7128712871287	5	1	NA	NA	NA	87.87966444894417	57	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018594	Chromosome_3A	1434	4	36	38.77266387726639	0.6680556454221934	91.49269311064718	36	1	92.14123006833712	18	1	90.94412331406551	18	1	75.93386405388856	50	1	methylated (>=50%)	Q0IIF9	Cytochrome P450 2U1 (Long-chain fatty acid omega-monooxygenase) (EC 1.14.14.80)	steroid metabolic process [GO:0008202]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN018595	Chromosome_3A	471	1	14	41.825902335456476	0.6817617866004962	81.36300417246176	14	1	81.36300417246176	14	1	NA	NA	NA	73.52071005917159	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018596	Chromosome_3A	840	1	33	42.976190476190474	0.853185595567867	13.785310734463277	33	0	13.785310734463277	33	0	NA	NA	NA	9.688810417126462	76	0.06578947368421052	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018597	Chromosome_3A	654	2	13	42.04892966360856	0.4579831932773109	90.76175040518639	13	1	90.77669902912622	10	1	90.73170731707317	3	1	89.63210702341136	4	1	methylated (>=50%)	Q3ZBD2	Actin-related protein 10	retrograde axonal transport of mitochondrion [GO:0098958]	hit with GO BP
GN018598	Chromosome_3A	3956	3	52	38.67542972699697	0.35191575043323997	93.2658757850663	52	1	95.0105411103303	24	1	91.54539154539154	28	1	90.55865921787709	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018599	Chromosome_3A	285	1	8	44.91228070175438	0.5588235294117647	0	8	0	0	8	0	NA	NA	NA	60.75949367088607	40	0.6	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018600	Chromosome_3A	4158	4	62	37.03703703703704	0.4349930143560046	73.84364820846906	62	0.7419354838709677	46.239554317548745	28	0.42857142857142855	88.76066231811339	34	1	11.515837104072398	76	0	methylated (>=50%)	Q5E9H5	Mitochondrial chaperone BCS1 (EC 3.6.1.-) (BCS1-like protein)	mitochondrial respiratory chain complex I assembly [GO:0032981]; mitochondrial respiratory chain complex III assembly [GO:0034551]; mitochondrial respiratory chain complex IV assembly [GO:0033617]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]	hit with GO BP
GN018601	Chromosome_3A	375	1	15	44.53333333333333	0.8173496076721883	0.9523809523809523	15	0	0.9523809523809523	15	0	NA	NA	NA	0.561447286338116	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018602	Chromosome_3A	300	1	12	43.333333333333336	0.8528784648187633	1.1182108626198084	12	0	1.1182108626198084	12	0	NA	NA	NA	1.1207970112079702	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018603	Chromosome_3A	3759	6	98	34.15802075019952	0.8946435336746291	1.3113651647612643	98	0	1.7771701982228298	30	0	1.1594202898550725	68	0	0.6700167504187605	62	0	unmethylated (<10%)	O08564	Phospholipid phosphatase 1 (EC 3.1.3.-) (EC 3.1.3.106) (EC 3.1.3.4) (EC 3.6.1.75) (Lipid phosphate phosphohydrolase 1) (PAP2-alpha) (Phosphatidate phosphohydrolase type 2a) (Phosphatidic acid phosphatase 2a) (PAP-2a) (PAP2a)	ceramide metabolic process [GO:0006672]; phospholipid catabolic process [GO:0009395]; phospholipid dephosphorylation [GO:0046839]; phospholipid metabolic process [GO:0006644]; signal transduction [GO:0007165]; sphingosine metabolic process [GO:0006670]	hit with GO BP
GN018604	Chromosome_3A	672	1	5	36.01190476190476	0.25460331893612187	0.6688963210702341	5	0	0.6688963210702341	5	0	NA	NA	NA	0.3516998827667057	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018605	Chromosome_3A	1734	3	51	39.965397923875436	0.7365817091454273	0.35410764872521244	49	0	0.22346368715083798	35	0	0.5802707930367504	14	0	0.4078857919782461	66	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN018606	Chromosome_3A	9180	6	264	35.54466230936819	0.9111319974435129	0.7423182233039245	250	0	0.7731958762886598	63	0	0.733987483581859	187	0	0.7208650380456548	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018607	Chromosome_3A	12353	10	379	37.367441107423296	0.8790127197913404	0.7475948281144678	367	0	0.38684719535783363	59	0	0.7999438635885201	308	0	0.6215722120658135	75	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN018608	Chromosome_3A	3031	3	86	37.38040250742329	0.813523669230001	0.37555479685899623	77	0	0.3194888178913738	40	0	0.4398826979472141	37	0	0.7122507122507122	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018590	Chromosome_3A	2097	3	16	33.09489747257987	0.27883784322850874	85.67251461988305	16	1	91.68443496801706	9	1	80.61041292639138	7	1	85.24173027989822	21	1	methylated (>=50%)	A7RZW4	Dipeptidyl peptidase 3 (EC 3.4.14.4) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) (Dipeptidyl peptidase III) (DPP III)	proteolysis [GO:0006508]	hit with GO BP
GN018589	Chromosome_3A	5814	6	49	34.8469212246302	0.27762093768180485	86.28200229270156	49	0.9795918367346939	91.9831223628692	18	1	83.04373876572798	31	0.967741935483871	77.91491596638656	44	1	methylated (>=50%)	Q9NY33	Dipeptidyl peptidase 3 (EC 3.4.14.4) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) (Dipeptidyl peptidase III) (DPP III) (Enkephalinase B)	proteolysis [GO:0006508]	hit with GO BP
GN018583	Chromosome_3A	45262	26	817	36.32848747293536	0.5473473975511306	76.10897470616909	711	0.849507735583685	81.57720344599072	67	0.8955223880597015	75.62227203019937	644	0.84472049689441	75.80529706513958	32	1	methylated (>=50%)	Q13395	tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 (EC 2.1.1.34) (TAR RNA-binding protein 1) (TAR RNA-binding protein of 185 kDa) (TRP-185)	regulation of transcription by RNA polymerase II [GO:0006357]; tRNA methylation [GO:0030488]	hit with GO BP
GN018582	Chromosome_3A	16306	5	191	36.863731141910954	0.34614578408353075	75.50200803212851	163	0.9141104294478528	83.57588357588358	10	0.9	74.96546007184305	153	0.9150326797385621	27.984966753396936	59	0.2033898305084746	methylated (>=50%)	Q5I0I4	Distal membrane-arm assembly complex protein 2 (ATP synthase subunit s-like protein)	mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN018581	Chromosome_3A	17772	15	287	35.803511141120865	0.5058808593866229	89.12406191369605	278	0.9532374100719424	87.47372845733501	45	0.9111111111111111	89.39156503372624	233	0.9613733905579399	28.34008097165992	14	0.2857142857142857	methylated (>=50%)	Q86UA1	Pre-mRNA-processing factor 39 (PRP39 homolog)	mRNA 5'-splice site recognition [GO:0000395]	hit with GO BP
GN018577	Chromosome_3A	18007	9	325	34.28111290053868	0.6175255693377296	84.64307755605843	305	0.9934426229508196	92.67605633802818	11	1	84.3386356357425	294	0.9931972789115646	49.798590130916416	27	0.5185185185185185	methylated (>=50%)	Q60969	Serine/threonine/tyrosine-interacting protein (Inactive tyrosine-protein phosphatase Styx) (Phosphoserine/threonine/tyrosine interaction protein)	negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process [GO:0062026]; regulation of ERK1 and ERK2 cascade [GO:0070372]; spermatogenesis [GO:0007283]	hit with GO BP
GN018578	Chromosome_3A	2638	5	37	35.36770280515542	0.44929617661409854	93.49255797853928	35	1	96.71232876712328	9	1	93.026941362916	26	1	81.37651821862349	11	1	methylated (>=50%)	P91809	TATA-box-binding protein (TATA sequence-binding protein) (TBP) (TATA-binding factor) (TATA-box factor) (Transcription initiation factor TFIID TBP subunit)	DNA-templated transcription initiation [GO:0006352]	hit with GO BP
GN018579	Chromosome_3A	8244	11	89	36.923823386705486	0.31674799246935875	81.70699973978662	89	0.9550561797752809	85.94339622641509	48	0.9375	76.49448636099825	41	0.975609756097561	86.57342657342657	12	1	methylated (>=50%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN018580	Chromosome_3A	876	2	8	35.50228310502283	0.2909090909090909	84.3956043956044	8	1	84.3956043956044	8	1	NA	NA	NA	57.214554579673774	13	0.6153846153846154	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018573	Chromosome_3A	9787	5	156	34.872790436293045	0.525279089738085	79.22643907753768	156	0.8974358974358975	72.4401913875598	22	0.7272727272727273	79.93780720232722	134	0.9253731343283582	67.91899813482547	62	0.6612903225806451	methylated (>=50%)	Q5F3X0	Lysocardiolipin acyltransferase 1 (EC 2.3.1.-) (1-acylglycerol-3-phosphate O-acyltransferase 8) (1-AGP acyltransferase 8) (1-AGPAT 8) (EC 2.3.1.51) (Acyl-CoA:lysocardiolipin acyltransferase 1)	CDP-diacylglycerol biosynthetic process [GO:0016024]; phosphatidylinositol acyl-chain remodeling [GO:0036149]	hit with GO BP
GN018574	Chromosome_3A	3550	4	57	34.816901408450704	0.5348590097376852	90.87313659872224	57	1	89.875173370319	13	1	91.153546375682	44	1	88.09657495788883	24	0.9583333333333334	methylated (>=50%)	Q08CA1	GDP-D-glucose phosphorylase 1 (EC 2.7.7.78)	glucose metabolic process [GO:0006006]	hit with GO BP
GN018575	Chromosome_3A	6396	9	84	33.72420262664165	0.4638255698711596	87.18576558929155	83	1	83.33333333333333	15	1	87.77276147479307	68	1	88.10061270557884	37	1	methylated (>=50%)	B6NXD5	BRISC and BRCA1-A complex member 2 (BRCA1-A complex subunit BRE) (BRCA1/BRCA2-containing complex subunit 45) (Brain and reproductive organ-expressed protein)	double-strand break repair [GO:0006302]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; positive regulation of DNA repair [GO:0045739]; response to ionizing radiation [GO:0010212]	hit with GO BP
GN018572	Chromosome_3A	819	1	0	37.362637362637365	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6435466571326421	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018571	Chromosome_3A	957	1	4	40.334378265412745	0.13052373158756136	0	3	0	0	3	0	NA	NA	NA	0	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018570	Chromosome_3A	1044	1	5	39.6551724137931	0.1552047096601552	0	5	0	0	5	0	NA	NA	NA	0	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018569	Chromosome_3A	204	1	0	38.72549019607843	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018568	Chromosome_3A	1665	1	5	39.15915915915916	0.09765281345673364	0.7142857142857143	5	0	0.7142857142857143	5	0	NA	NA	NA	0	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018567	Chromosome_3A	1233	1	2	39.01054339010543	0.05327975110189266	0	2	0	0	2	0	NA	NA	NA	0.5899705014749262	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018566	Chromosome_3A	177	1	0	38.983050847457626	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018565	Chromosome_3A	1014	1	3	39.447731755424066	0.09536050156739811	1.1764705882352942	3	0	1.1764705882352942	3	0	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018564	Chromosome_3A	1596	1	45	48.1203007518797	0.5058458937878575	0	12	0	0	12	0	NA	NA	NA	1.4357780364765231	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018563	Chromosome_3A	1929	1	53	47.95230689476413	0.4987754663960659	0	9	0	0	9	0	NA	NA	NA	0.22727272727272727	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018562	Chromosome_3A	2847	1	79	48.050579557428875	0.502703355110671	1.3824884792626728	8	0	1.3824884792626728	8	0	NA	NA	NA	0	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018561	Chromosome_3A	11764	7	313	35.97415844950697	0.8246406883554472	0.9318355884605566	311	0	0.5622837370242214	53	0	0.9958071278825996	258	0	0.3362474781439139	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018559	Chromosome_3A	192	1	8	38.020833333333336	1.2037617554858935	0.4819277108433735	8	0	0.4819277108433735	8	0	NA	NA	NA	0.6932409012131716	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018560	Chromosome_3A	878	3	29	37.12984054669704	0.9592374924653405	0.5312084993359893	29	0	0.872093023255814	15	0	0.24449877750611246	14	0	0.4752851711026616	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018678	Chromosome_3A	21796	16	371	36.30482657368324	0.5180776137839395	90.0845773083369	370	0.9972972972972973	96.12803304078471	83	1	89.00977826745627	287	0.9965156794425087	96.33879781420765	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018679	Chromosome_3A	3884	6	130	38.95468589083419	0.8824464942972691	32.566248256624824	130	0.18461538461538463	20.809614168247943	60	0.1	37.03971119133574	70	0.2571428571428571	0.9373326191751473	66	0	sparse (10-50%)	Q6GM78	Isoaspartyl peptidase/L-asparaginase (EC 3.4.19.5) (EC 3.5.1.1) (Asparaginase-like protein 1) (Beta-aspartyl-peptidase) (Isoaspartyl dipeptidase) (L-asparagine amidohydrolase) [Cleaved into: Isoaspartyl peptidase/L-asparaginase alpha chain; Isoaspartyl peptidase/L-asparaginase beta chain]	L-asparagine catabolic process [GO:0006530]	hit with GO BP
GN019927	Chromosome_3A	279	1	18	56.630824372759854	0.8058408215661104	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018666	Chromosome_3A	354	1	17	53.67231638418079	0.6686666666666666	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018665	Chromosome_3A	468	1	19	38.034188034188034	1.1510679611650485	0.6276150627615062	19	0	0.6276150627615062	19	0	NA	NA	NA	0.5128205128205128	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018664	Chromosome_3A	399	1	13	47.11779448621554	0.5894318181818182	0.7220216606498195	13	0	0.7220216606498195	13	0	NA	NA	NA	0.6134969325153374	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018663	Chromosome_3A	1020	1	38	36.96078431372549	1.1492616972069027	0.333667000333667	38	0	0.333667000333667	38	0	NA	NA	NA	0.5330490405117271	40	0	unmethylated (<10%)	O50655	Integrase/recombinase xerD homolog	DNA integration [GO:0015074]; DNA recombination [GO:0006310]	hit with GO BP
GN018662	Chromosome_3A	567	1	24	41.7989417989418	0.9711675706537254	0.4889975550122249	24	0	0.4889975550122249	24	0	NA	NA	NA	0.5381165919282511	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018661	Chromosome_3A	180	1	5	49.44444444444444	0.46439628482972134	0.591715976331361	5	0	0.591715976331361	5	0	NA	NA	NA	0.43347782594198064	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018660	Chromosome_3A	498	1	5	42.16867469879518	0.22993812909779296	1.1204481792717087	5	0	1.1204481792717087	5	0	NA	NA	NA	0.29739776951672864	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018659	Chromosome_3A	366	1	9	42.622950819672134	0.5487256371814093	0.5813953488372093	9	0	0.5813953488372093	9	0	NA	NA	NA	0.5353319057815846	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018658	Chromosome_3A	330	1	7	47.57575757575758	0.3793103448275862	0	7	0	0	7	0	NA	NA	NA	0.43782837127845886	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018657	Chromosome_3A	345	1	3	38.26086956521739	0.25054466230936817	1.092896174863388	3	0	1.092896174863388	3	0	NA	NA	NA	4.397705544933078	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018656	Chromosome_3A	342	1	21	53.21637426900585	0.9811475409836066	1.1494252873563218	7	0	1.1494252873563218	7	0	NA	NA	NA	0.5085823267641449	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018655	Chromosome_3A	336	1	4	42.857142857142854	0.26006191950464397	13.740458015267176	4	0	13.740458015267176	4	0	NA	NA	NA	15.502555366269165	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018654	Chromosome_3A	27839	22	516	36.95894249075039	0.5435807223346221	0.6351328764833696	516	0	0.36775973030953113	75	0	0.6773428806425081	441	0	0.3991130820399113	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018653	Chromosome_3A	2442	4	53	34.643734643734646	0.7236647879763822	0.6302521008403361	52	0	0.7731958762886598	17	0	0.5868544600938967	35	0	1.407442748091603	53	0	unmethylated (<10%)	A0ZT93	Type-2 ice-structuring protein (Type II antifreeze protein) (lpAFP)	NA	hit, no GO BP
GN018652	Chromosome_3A	606	1	22	39.76897689768977	0.9189412737799835	0.5555555555555556	22	0	0.5555555555555556	22	0	NA	NA	NA	1.3550135501355014	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018651	Chromosome_3A	1065	1	51	41.502347417840376	1.1120779672815873	0.3257328990228013	51	0	0.3257328990228013	51	0	NA	NA	NA	1.1078998073217727	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018650	Chromosome_3A	360	1	3	38.888888888888886	0.22203947368421054	0.6896551724137931	3	0	0.6896551724137931	3	0	NA	NA	NA	0.872093023255814	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018649	Chromosome_3A	4991	4	130	35.52394309757564	0.8256515321184974	3.2359081419624216	130	0	0.13986013986013987	14	0	3.605408112168252	116	0	0.35952747817154596	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018648	Chromosome_3A	770	2	26	42.33766233766234	0.8187134502923976	1.3291634089132134	26	0	1.3291634089132134	26	0	NA	NA	NA	0.311262026032824	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018647	Chromosome_3A	1519	3	28	39.49967083607637	0.5014619883040936	0.6357856494096276	28	0	0.8559201141226819	19	0	0.25	9	0	0.7479431563201197	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018646	Chromosome_3A	11133	7	318	37.60891044642055	0.8082143370795751	0.5694578119987167	250	0	0.31364349189754315	44	0	0.6158218853623875	206	0	0.3877847794474067	76	0	unmethylated (<10%)	P49109	Flavin-containing monooxygenase 5 (FMO 5) (Dimethylaniline monooxygenase [N-oxide-forming] 5) (EC 1.14.13.8) (Dimethylaniline oxidase 5) (Hepatic flavin-containing monooxygenase 5) (NADPH oxidase) (EC 1.6.3.1)	regulation of cholesterol metabolic process [GO:0090181]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN018645	Chromosome_3A	957	1	16	43.573667711598745	0.3653368963542661	48.20415879017013	16	0.5	48.20415879017013	16	0.5	NA	NA	NA	46.77312042581504	18	0.3888888888888889	sparse (10-50%)	Q9D0T2	Dual specificity protein phosphatase 12 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity phosphatase T-DSP4) (Dual specificity phosphatase VH1)	dephosphorylation [GO:0016311]; positive regulation of hexokinase activity [GO:1903301]; protein dephosphorylation [GO:0006470]	hit with GO BP
GN018644	Chromosome_3A	27181	16	321	35.15691107759096	0.3836119276296007	47.154119647549855	320	0.53125	63.28560063643596	32	0.71875	45.79464315644799	288	0.5104166666666666	39.41958887545345	15	0.26666666666666666	sparse (10-50%)	Q21279	Probable tubulin polyglutamylase ttll-15 (EC 6.-.-.-) (Tubulin--tyrosine ligase-like protein 15)	egg-laying behavior [GO:0018991]	hit with GO BP
GN013176	Chromosome_3A	1432	3	12	36.03351955307262	0.2583477411110276	45.97349643221203	12	0.25	47.121212121212125	9	0.3333333333333333	43.613707165109034	3	0	26.726279185295578	40	0.125	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018643	Chromosome_3A	533	2	4	45.40337711069419	0.14683195592286502	90.9090909090909	4	1	90.9090909090909	4	1	NA	NA	NA	84	25	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018642	Chromosome_3A	378	1	6	43.386243386243386	0.375	85.38205980066445	6	1	85.38205980066445	6	1	NA	NA	NA	86.26226583407671	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018641	Chromosome_3A	765	1	12	45.62091503267974	0.3014976353126642	89.44723618090453	12	1	89.44723618090453	12	1	NA	NA	NA	86.2700228832952	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018640	Chromosome_3A	23135	9	371	32.362221741949426	0.6190043784948916	85.4585152838428	370	0.9702702702702702	32.675044883303414	12	0.5	86.55053300152287	358	0.9860335195530726	26.51834034876729	24	0.16666666666666666	methylated (>=50%)	Q8WNV7	Dehydrogenase/reductase SDR family member 4 (EC 1.1.1.184) (EC 1.1.1.300) (NADPH-dependent carbonyl reductase) (CR) (PHCR) (NADPH-dependent retinol dehydrogenase/reductase) (NDRD) (Peroxisomal carbonyl reductase) (PerCR) (Peroxisomal short-chain alcohol dehydrogenase) (PSCD) (Short chain dehydrogenase/reductase family 25C member 2) (Protein SDR25C2)	ketone metabolic process [GO:0042180]; retinal metabolic process [GO:0042574]; retinoid metabolic process [GO:0001523]; steroid metabolic process [GO:0008202]	hit with GO BP
GN018639	Chromosome_3A	10183	11	126	34.0567612687813	0.4268703929691669	82.66632016632016	125	0.968	88.42443729903538	34	1	80.39499909403878	91	0.9560439560439561	90.21765712888237	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018638	Chromosome_3A	10014	6	141	35.08088675853805	0.45995754761234636	86.97328818660647	139	0.9568345323741008	93.06466729147141	15	1	86.29377940407737	124	0.9516129032258065	42.508038585209	49	0.4897959183673469	methylated (>=50%)	O15182	Centrin-3	centrosome cycle [GO:0007098]; microtubule cytoskeleton organization [GO:0000226]; mRNA export from nucleus [GO:0006406]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN018637	Chromosome_3A	9763	6	109	33.811328485096794	0.39171772185633286	74.93504717626145	107	0.9065420560747663	58.48623853211009	6	0.6666666666666666	75.97789733895594	101	0.9207920792079208	47.01540436456996	49	0.5306122448979592	methylated (>=50%)	Q5ZJQ3	Protein lin-52 homolog	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN018636	Chromosome_3A	2860	3	111	42.37762237762238	0.8668749249068846	0.7128309572301426	99	0	0.8946322067594433	48	0	0.6185567010309279	51	0	16.41598624838848	53	0.1320754716981132	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003854	Chromosome_3A	362	1	15	45.027624309392266	0.861904761904762	95.82441113490364	15	1	95.82441113490364	15	1	NA	NA	NA	87.22259583053128	53	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018667	Chromosome_3A	975	1	40	42.46153846153846	0.9112149532710281	0.7189072609633357	40	0	0.7189072609633357	40	0	NA	NA	NA	3.5135135135135136	12	0	unmethylated (<10%)	Q865K9	Membrane progestin receptor beta (mPR beta) (Progestin and adipoQ receptor family member VIII)	response to steroid hormone [GO:0048545]	hit with GO BP
GN018668	Chromosome_3A	1641	2	41	38.634978671541745	0.6712459968273922	0.7096069868995634	41	0	0.9803921568627451	12	0	0.6553079947575361	29	0	57.734375	26	0.5	unmethylated (<10%)	Q96M34	Testis-specific expressed protein 55 (Testis-specific conserved, cAMP-dependent type II PK-anchoring protein)	NA	hit, no GO BP
GN018669	Chromosome_3A	1745	4	23	35.24355300859599	0.4372004357298475	71.59904534606206	23	0.6956521739130435	65.60509554140127	18	0.6111111111111112	89.52380952380952	5	1	0.6196377502383222	48	0	methylated (>=50%)	Q9DBT3	Coiled-coil domain-containing protein 97	NA	hit, no GO BP
GN018670	Chromosome_3A	1496	3	27	27.072192513368982	0.9900970683400333	0.5357142857142857	27	0	0.47619047619047616	14	0	0.5714285714285714	13	0	0.8408071748878924	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018671	Chromosome_3A	878	2	30	39.521640091116176	0.9110403984504704	0.783289817232376	29	0	1.1111111111111112	23	0	0	6	0	0.7619047619047619	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018672	Chromosome_3A	1219	3	38	38.884331419196066	0.8599647266313933	0.5972696245733788	38	0	0.8356545961002786	26	0	0.22026431718061673	12	0	0.7414272474513438	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018673	Chromosome_3A	1552	3	54	40.27061855670103	0.8589877621302503	0.8976660682226212	54	0	0.8010680907877169	32	0	0.9761388286334056	22	0	0.4434589800443459	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018674	Chromosome_3A	23853	10	318	35.341466482203494	0.4274468852337628	70.43301759133965	231	0.8614718614718615	63.028169014084504	15	0.8	71.04954558780416	216	0.8657407407407407	76.19583567810918	28	0.8928571428571429	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008669	Chromosome_4A	590	2	11	40.67796610169491	0.45524691358024694	77.26396917148362	11	0.7272727272727273	84.57446808510639	9	0.7777777777777778	58.04195804195804	2	0.5	74.75035663338089	19	0.8947368421052632	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008670	Chromosome_4A	1339	2	64	41.822255414488424	1.0934098883572567	0.7102272727272727	64	0	0.7249879168680522	63	0	0	1	0	0.5833996287456908	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016011	Chromosome_4A	401	1	26	53.61596009975062	0.9031531531531531	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008671	Chromosome_4A	276	1	18	56.52173913043478	0.8177777777777778	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008672	Chromosome_4A	276	1	18	56.52173913043478	0.8177777777777778	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008673	Chromosome_4A	276	1	18	56.52173913043478	0.8177777777777778	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008674	Chromosome_4A	276	1	18	56.52173913043478	0.8177777777777778	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008675	Chromosome_4A	306	1	21	47.38562091503268	1.2540983606557377	0.6591337099811676	21	0	0.6591337099811676	21	0	NA	NA	NA	1.4661654135338347	119	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008676	Chromosome_4A	753	2	13	39.9734395750332	0.43229994700582935	0.5639097744360902	13	0	0.5639097744360902	13	0	NA	NA	NA	1.3881748071979434	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008677	Chromosome_4A	906	1	32	40.06622516556291	2.5254355400696866	0	7	0	0	7	0	NA	NA	NA	0	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008678	Chromosome_4A	318	1	9	38.679245283018865	2.1486486486486487	0	4	0	0	4	0	NA	NA	NA	0.2770083102493075	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008679	Chromosome_4A	1185	1	38	38.734177215189874	2.370249499947363	0	3	0	0	3	0	NA	NA	NA	0.33557046979865773	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008680	Chromosome_4A	942	1	34	39.91507430997877	2.0342987804878048	0.30303030303030304	18	0	0.30303030303030304	18	0	NA	NA	NA	0	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008681	Chromosome_4A	333	1	9	42.94294294294294	0.5864970645792563	0	9	0	0	9	0	NA	NA	NA	0.6185567010309279	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008682	Chromosome_4A	243	1	7	44.44444444444444	0.5964235624123422	4.519774011299435	7	0	4.519774011299435	7	0	NA	NA	NA	3.5472972972972974	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008683	Chromosome_4A	659	2	11	34.749620637329286	0.5867735146511251	41.07142857142857	4	0.25	43.85964912280702	2	0.5	38.18181818181818	2	0	10.972933430870519	32	0.1875	NA	NA	NA	NA	no Swiss-Prot hit
GN008684	Chromosome_4A	11612	5	280	35.26524285222184	0.7756835923987131	1.338543398736282	235	0	0.4195804195804196	11	0	1.3966233536639265	224	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003679	Chromosome_4A	781	2	28	42.765685019206146	0.7863924050632911	0.32310177705977383	20	0	0.35335689045936397	19	0	0	1	0	0.46826222684703434	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008685	Chromosome_4A	186	1	0	48.924731182795696	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1711711711711712	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008686	Chromosome_4A	10948	9	183	34.846547314578004	0.5523478901437853	84.1055538508745	165	0.896969696969697	86.91239316239316	47	0.9361702127659575	83.44086021505376	118	0.8813559322033898	88.75802997858672	32	1	methylated (>=50%)	Q3ZC48	DNA damage-regulated autophagy modulator protein 2 (Transmembrane protein 77)	photoreceptor cell maintenance [GO:0045494]; regulation of autophagy [GO:0010506]; visual perception [GO:0007601]	hit with GO BP
GN008687	Chromosome_4A	13937	6	240	32.6253856640597	0.648370525355977	72.62096774193549	240	0.8041666666666667	57.884231536926144	17	0.5882352941176471	73.52365814891796	223	0.820627802690583	0.7562736335510485	69	0	methylated (>=50%)	Q6P8D9	NEDD8-conjugating enzyme Ubc12 (EC 2.3.2.34) (NEDD8 carrier protein) (Ubiquitin-conjugating enzyme E2 M)	protein modification process [GO:0036211]; protein neddylation [GO:0045116]	hit with GO BP
GN008688	Chromosome_4A	543	1	23	43.83057090239411	0.90030276816609	1.216089803554724	23	0	1.216089803554724	23	0	NA	NA	NA	0.724112961622013	46	0	unmethylated (<10%)	P02518	Heat shock protein 27	behavioral response to starvation [GO:0042595]; defense response to bacterium [GO:0042742]; defense response to fungus [GO:0050832]; determination of adult lifespan [GO:0008340]; protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN008689	Chromosome_4A	4923	2	86	35.97399959374365	0.5399513329864406	79.34683451924832	86	0.8953488372093024	77.29226361031519	25	0.84	80.04895960832313	61	0.9180327868852459	0.3411178168459722	41	0	methylated (>=50%)	O08848	RNA-binding protein Ro60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2)	cellular response to interferon-alpha [GO:0035457]; cilium assembly [GO:0060271]; immune system development [GO:0002520]; regulation of gene expression [GO:0010468]; response to UV [GO:0009411]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN008690	Chromosome_4A	6396	2	145	37.6641651031895	0.6392437869104665	82.711546477699045	145	0.8827586206896552	71.75810473815461	31	0.7741935483870968	84.90990990990991	114	0.9122807017543859	0.8789722785665991	54	0	methylated (>=50%)	P10155	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Ro60 autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)	cellular response to interferon-alpha [GO:0035457]; regulation of gene expression [GO:0010468]; transcription by RNA polymerase III [GO:0006383]	hit with GO BP
GN008691	Chromosome_4A	1701	1	62	41.91651969429747	0.8351441241685145	0.4013133892739876	62	0	0.4013133892739876	62	0	NA	NA	NA	0.6749555950266429	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008692	Chromosome_4A	324	1	15	44.75308641975309	0.9375	0.3333333333333333	15	0	0.3333333333333333	15	0	NA	NA	NA	0.7669223074358119	58	0	unmethylated (<10%)	A5PJJ7	Short-chain dehydrogenase/reductase family 16C member 6 (EC 1.1.1.-)	NA	hit, no GO BP
GN008693	Chromosome_4A	150	1	7	52.666666666666664	1.3059701492537314	0.9900990099009901	7	0	0.9900990099009901	7	0	NA	NA	NA	1.444043321299639	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008694	Chromosome_4A	21723	38	579	37.25084012337154	0.7700439614329572	0.5931198102016607	546	0	0.6534192624418188	303	0	0.5349900767969626	243	0	2.3230088495575223	48	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN008695	Chromosome_4A	28921	17	441	36.551294906815116	0.4577847003349891	82.26402748241452	435	0.9563218390804598	91.38198757763975	58	1	81.42484547500804	377	0.9496021220159151	47.088122605363985	33	0.5151515151515151	methylated (>=50%)	Q3TUF7	YEATS domain-containing protein 2	chromatin remodeling [GO:0006338]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of DNA-templated transcription [GO:0006355]; regulation of embryonic development [GO:0045995]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of tubulin deacetylation [GO:0090043]	hit with GO BP
GN008696	Chromosome_4A	1837	3	61	36.799129014697876	0.9814065510597303	0.8460236886632826	61	0	0.8125	33	0	0.8856088560885609	28	0	0.5641748942172073	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008697	Chromosome_4A	3036	1	121	41.46903820816864	0.928219848192357	1.6315539363218754	121	0	1.6315539363218754	121	0	NA	NA	NA	0.6682867557715675	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008698	Chromosome_4A	1047	1	50	44.22158548233047	0.9908017260958437	0.5347593582887701	50	0	0.5347593582887701	50	0	NA	NA	NA	0.5398539218799618	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008699	Chromosome_4A	1098	1	39	41.07468123861567	0.8456161137440759	0.478796169630643	39	0	0.478796169630643	39	0	NA	NA	NA	0.39298669891172916	60	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN008700	Chromosome_4A	324	1	8	42.901234567901234	0.54	0.4032258064516129	8	0	0.4032258064516129	8	0	NA	NA	NA	0.6483482556344551	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008701	Chromosome_4A	675	1	23	45.18518518518518	0.6679143004646361	1.256544502617801	23	0	1.256544502617801	23	0	NA	NA	NA	0.7684918347742555	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008702	Chromosome_4A	381	1	15	40.68241469816273	0.966024340770791	0.29850746268656714	15	0	0.29850746268656714	15	0	NA	NA	NA	0.5488474204171241	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008703	Chromosome_4A	6866	4	210	38.27556073405185	0.8360687962397605	7.198700375672657	210	0	9.722222222222221	27	0	6.864436012418075	183	0	3.3057851239669422	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008704	Chromosome_4A	1296	1	35	43.59567901234568	0.6096446427611418	11.505922165820643	34	0	11.505922165820643	34	0	NA	NA	NA	14.826498422712934	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008705	Chromosome_4A	1617	1	18	36.42547928262214	0.3445557212870232	94.3298969072165	18	1	94.3298969072165	18	1	NA	NA	NA	95.60943643512451	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008706	Chromosome_4A	51164	14	766	34.094285044171684	0.5157139788515237	93.09654737221672	762	0.989501312335958	89.21815889029004	28	0.9285714285714286	93.21071289370627	734	0.9918256130790191	4.688332445391582	35	0.02857142857142857	methylated (>=50%)	A4IFE9	Transmembrane 9 superfamily member 1	protein localization to membrane [GO:0072657]	hit with GO BP
GN008707	Chromosome_4A	26082	6	281	34.21133348669581	0.3697799345207192	71.69080919080919	257	0.7898832684824902	81.79362506753107	41	0.8780487804878049	70.37063183903989	216	0.7731481481481481	22.829964328180736	42	0.19047619047619047	methylated (>=50%)	Q86MI0	Homeobox protein dve-1 (Defective proventriculus homolog protein)	chromatin remodeling [GO:0006338]; embryo development ending in birth or egg hatching [GO:0009792]; mitochondrial unfolded protein response [GO:0034514]; regulation of innate immune response [GO:0045088]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008708	Chromosome_4A	183	1	18	49.72677595628415	1.7210031347962382	0.8620689655172413	7	0	0.8620689655172413	7	0	NA	NA	NA	0.8179959100204499	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008709	Chromosome_4A	11463	9	145	33.52525516880398	0.4563534227845182	91.2557603686636	143	1	94.5945945945946	31	1	90.4849688031764	112	1	50.5859375	26	0.5	methylated (>=50%)	P61962	DDB1- and CUL4-associated factor 7 (WD repeat-containing protein 68) (WD repeat-containing protein An11 homolog)	protein ubiquitination [GO:0016567]	hit with GO BP
GN008710	Chromosome_4A	744	1	37	47.8494623655914	0.8788430226989752	0.4317789291882556	37	0	0.4317789291882556	37	0	NA	NA	NA	0.1725625539257981	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008711	Chromosome_4A	1382	2	40	38.42257597684515	0.7869039145907474	0.26229508196721313	40	0	0.19011406844106463	13	0	0.3003003003003003	27	0	0.608596424496006	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020027	Chromosome_4A	1445	2	24	37.2318339100346	0.48021933893681545	NA	0	NA	NA	NA	NA	NA	NA	NA	4.359165424739195	68	0	NA	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN020589	Chromosome_4A	3584	3	34	29.296875	0.44281644281644283	NA	0	NA	NA	NA	NA	NA	NA	NA	1.6299918500407498	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008712	Chromosome_4A	327	1	4	36.08562691131498	0.37618636755823986	0.5714285714285714	4	0	0.5714285714285714	4	0	NA	NA	NA	0.5022601707684581	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008713	Chromosome_4A	381	1	10	47.76902887139108	0.4657132379904657	7.8817733990147785	10	0	7.8817733990147785	10	0	NA	NA	NA	0.840630472854641	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008714	Chromosome_4A	12506	6	301	35.10315048776587	0.7813127020449675	5.170880447211282	293	0	4.595669465311533	51	0	5.267453075153943	242	0	3.544929925803792	38	0	unmethylated (<10%)	Q8CBH5	Major facilitator superfamily domain-containing protein 6 (Macrophage MHC class I receptor 2)	antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]	hit with GO BP
GN008715	Chromosome_4A	1149	4	26	37.24978241949521	0.6547439016371885	52.24257738471257	26	0.6153846153846154	65.64814814814815	19	0.7368421052631579	23.45924453280318	7	0.2857142857142857	0.6350550381033023	32	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008716	Chromosome_4A	29493	24	343	32.7569253721222	0.43594088878668963	84.65481339099792	342	0.9532163742690059	86.45381984036489	69	0.927536231884058	84.271627726235	273	0.9597069597069597	2.074688796680498	26	0	methylated (>=50%)	A0A286Y9D1	PHD finger protein 14	lung alveolus development [GO:0048286]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of mesenchymal cell proliferation [GO:0072201]; negative regulation of mesenchymal cell proliferation involved in lung development [GO:2000791]; negative regulation of platelet-derived growth factor receptor-alpha signaling pathway [GO:2000584]; negative regulation of transcription by RNA polymerase II [GO:0000122]	hit with GO BP
GN008717	Chromosome_4A	7178	4	118	35.734187796043464	0.5157249707128052	78.67562178612656	111	0.8288288288288288	72.24770642201835	7	0.7142857142857143	78.98383371824481	104	0.8365384615384616	2.3798832510103276	24	0	methylated (>=50%)	Q9NRX3	Cytochrome c oxidase hypoxia associated subunit FA4L2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2) (NADH-ubiquinone oxidoreductase MLRQ subunit homolog) (NUOMS)	cellular response to hypoxia [GO:0071456]; negative regulation of mitochondrial electron transport, NADH to ubiquinone [GO:1902957]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; response to hypoxia [GO:0001666]	hit with GO BP
GN008718	Chromosome_4A	3320	4	59	37.34939759036145	0.517768214931433	89.6200814111262	59	0.9830508474576272	94.44444444444444	6	1	88.91050583657588	53	0.9811320754716981	39.59466139396935	69	0.30434782608695654	methylated (>=50%)	Q3T0D5	Large ribosomal subunit protein eL30 (60S ribosomal protein L30)	antimicrobial humoral immune response mediated by antimicrobial peptide [GO:0061844]; cytoplasmic translation [GO:0002181]; defense response to Gram-negative bacterium [GO:0050829]; killing of cells of another organism [GO:0031640]	hit with GO BP
GN008719	Chromosome_4A	19020	9	223	34.97896950578338	0.3989341590183578	85.45264259549974	218	0.9311926605504587	78.63083813179783	33	0.8787878787878788	86.52933454508735	185	0.9405405405405406	35.041407867494826	37	0.3783783783783784	methylated (>=50%)	Q91W90	Thioredoxin domain-containing protein 5 (EC 1.8.4.-) (EC 5.3.4.1) (Endoplasmic reticulum resident protein 46) (ER protein 46) (ERp46) (Plasma cell-specific thioredoxin-related protein) (PC-TRP) (Thioredoxin-like protein p46)	protein folding [GO:0006457]	hit with GO BP
GN008720	Chromosome_4A	1890	4	32	36.82539682539682	0.5042184946810284	54.13070283600493	32	0.53125	61.392405063291136	6	0.6666666666666666	52.373660030627875	26	0.5	40.30701754385965	36	0.3888888888888889	methylated (>=50%)	P08570	Large ribosomal subunit protein P1 (60S acidic ribosomal protein P1) (Acidic ribosomal protein RPA2) (RP21C)	cytoplasmic translation [GO:0002181]; translational elongation [GO:0006414]	hit with GO BP
GN008721	Chromosome_4A	2781	1	63	45.99065084501978	0.42841737701550786	93.30065359477125	63	1	93.30065359477125	63	1	NA	NA	NA	45.15151515151515	6	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008722	Chromosome_4A	444	1	5	43.91891891891892	0.33965728274173806	56.22406639004149	5	0.8	56.22406639004149	5	0.8	NA	NA	NA	42.792792792792795	66	0.5606060606060606	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008723	Chromosome_4A	21957	11	243	33.73411668260692	0.38908264443283513	79.84081502706144	242	0.9173553719008265	88.78411910669975	40	1	78.5244704163623	202	0.900990099009901	86.50852483320979	18	1	methylated (>=50%)	Q9Y2H5	Pleckstrin homology domain-containing family A member 6 (PH domain-containing family A member 6) (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)	NA	hit, no GO BP
GN008724	Chromosome_4A	27353	23	450	36.544437538844	0.4955228089001796	88.11765989164819	447	0.9731543624161074	91.29043126684635	117	1	87.2444011684518	330	0.9636363636363636	25.61038961038961	33	0.30303030303030304	methylated (>=50%)	Q94887	Neurexin-4 (Neurexin IV)	axon ensheathment [GO:0008366]; cell adhesion involved in heart morphogenesis [GO:0061343]; cell-cell junction organization [GO:0045216]; dorsal closure [GO:0007391]; establishment of glial blood-brain barrier [GO:0060857]; heart process [GO:0003015]; intracellular protein localization [GO:0008104]; nerve maturation [GO:0021682]; nervous system development [GO:0007399]; presynaptic membrane assembly [GO:0097105]; regulation of tube size, open tracheal system [GO:0035151]; septate junction assembly [GO:0019991]; signal transduction [GO:0007165]; synaptic target recognition [GO:0008039]; terminal button organization [GO:0072553]	hit with GO BP
GN008725	Chromosome_4A	24438	10	433	36.19363286684671	0.5435519440399548	51.46466115427764	430	0.5023255813953489	65.98188645902364	92	0.6521739130434783	48.10133060388946	338	0.46153846153846156	31.520815632965167	48	0.25	methylated (>=50%)	Q03172	Zinc finger protein 40 (Alpha A-crystallin-binding protein 1) (Alpha A-CRYBP1) (Alpha A-crystallin-binding protein I) (Transcription factor alphaA-CRYBP1)	BMP signaling pathway [GO:0030509]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008726	Chromosome_4A	26139	16	407	36.46658250124335	0.46984078740332746	86.20037807183365	388	0.9278350515463918	64.78276227481456	54	0.6296296296296297	89.41563262275957	334	0.9760479041916168	38.93069306930693	46	0.3695652173913043	methylated (>=50%)	Q5R9I5	Aspartate--tRNA ligase, cytoplasmic (EC 6.1.1.12) (Aspartyl-tRNA synthetase) (AspRS)	aspartyl-tRNA aminoacylation [GO:0006422]	hit with GO BP
GN013670	Chromosome_4A	234	1	4	47.43589743589744	0.3058823529411765	19.55719557195572	4	0	19.55719557195572	4	0	NA	NA	NA	8.414239482200648	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008727	Chromosome_4A	255	1	13	47.05882352941177	0.9661906149810551	1.1135857461024499	13	0	1.1135857461024499	13	0	NA	NA	NA	0.5805515239477503	109	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008728	Chromosome_4A	19818	3	421	36.40125138762741	0.6418164266637374	64.22322262804722	415	0.7807228915662651	48.530646515533164	24	0.4583333333333333	64.77086263478668	391	0.8005115089514067	1.313868613138686	112	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008729	Chromosome_4A	25276	17	378	34.96201930685235	0.4933777898590539	89.34089140824719	371	0.9622641509433962	89.81333333333333	33	0.9696969696969697	89.30562191431757	338	0.9615384615384616	75.60080106809079	43	0.7441860465116279	methylated (>=50%)	Q9UJ83	2-hydroxyacyl-CoA lyase 1 (EC 4.1.2.63) (2-hydroxyphytanoyl-CoA lyase) (2-HPCL) (Phytanoyl-CoA 2-hydroxylase 2)	fatty acid alpha-oxidation [GO:0001561]; fatty acid metabolic process [GO:0006631]; methyl-branched fatty acid metabolic process [GO:0097089]; phytanic acid metabolic process [GO:1903512]; protein targeting to peroxisome [GO:0006625]	hit with GO BP
GN008730	Chromosome_4A	11099	8	183	34.46256419497252	0.5558992815600411	78.10524958080742	182	0.8901098901098901	74.58715596330275	25	0.8	78.37125416204218	157	0.9044585987261147	50.29624753127057	24	0.5	methylated (>=50%)	Q6DHF7	GTP-binding protein 10	mitochondrial large ribosomal subunit assembly [GO:1902775]	hit with GO BP
GN008731	Chromosome_4A	6613	4	72	35.30923937698473	0.3498463613879937	89.55061082024433	70	1	94.42508710801394	6	1	89.22504072608797	64	1	91.5659904262594	55	1	methylated (>=50%)	Q3ZCF3	S-phase kinase-associated protein 1 (Cyclin-A/CDK2-associated protein p19) (S-phase kinase-associated protein 1A) (p19A) (p19skp1)	protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN008732	Chromosome_4A	1045	2	25	39.42583732057416	0.620369490881459	0.730816077953715	25	0	0.7233273056057866	19	0	0.746268656716418	6	0	0.6354249404289118	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008733	Chromosome_4A	1908	1	33	40.77568134171908	0.4167152009318579	2.450980392156863	9	0	2.450980392156863	9	0	NA	NA	NA	0.9394081728511038	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008734	Chromosome_4A	1081	3	13	34.96762257169288	0.39742647058823527	27.430093209054593	13	0	31.221020092735703	11	0	3.8461538461538463	2	0	14.797864225781845	20	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008735	Chromosome_4A	4175	3	105	34.51497005988024	0.8444611822360234	0.48486875104497573	105	0	0.44776119402985076	14	0	0.4895499905855771	91	0	0.5003752814610958	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008736	Chromosome_4A	771	1	30	39.688715953307394	0.9891378720492644	0.4099653106275623	30	0	0.4099653106275623	30	0	NA	NA	NA	1.828049128820337	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008737	Chromosome_4A	1515	1	39	38.679867986798676	0.689214725643897	0.4728132387706856	39	0	0.4728132387706856	39	0	NA	NA	NA	1.466275659824047	35	0	unmethylated (<10%)	P08430	UDP-glucuronosyltransferase 1A6 (UGT1A6) (EC 2.4.1.17) (A1) (P-nitrophenol-specific UDPGT) (UDP-glucuronosyltransferase 1-6) (UDPGT 1-6) (UGT1*6) (UGT1-06) (UGT1.6)	4-chlorobiphenyl metabolic process [GO:0018880]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to hormone stimulus [GO:0032870]; estrogen metabolic process [GO:0008210]; flavone metabolic process [GO:0051552]; liver development [GO:0001889]; response to 3-methylcholanthrene [GO:1904681]; response to Aroclor 1254 [GO:1904010]; response to lipopolysaccharide [GO:0032496]; response to peptide hormone [GO:0043434]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN008738	Chromosome_4A	6276	5	194	38.01784576163161	0.8564308067603185	0.7185175847724694	194	0	0.08438818565400844	28	0	0.8298755186721992	166	0	0.6112054329371817	50	0	unmethylated (<10%)	P78417	Glutathione S-transferase omega-1 (GSTO-1) (EC 2.5.1.18) (Glutathione S-transferase omega 1-1) (GSTO 1-1) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) (Monomethylarsonic acid reductase) (MMA(V) reductase) (EC 1.20.4.2) (S-(Phenacyl)glutathione reductase) (SPG-R)	cellular response to arsenic-containing substance [GO:0071243]; glutathione metabolic process [GO:0006749]; L-ascorbic acid metabolic process [GO:0019852]; negative regulation of release of sequestered calcium ion into cytosol [GO:0051280]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion [GO:0014810]; regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion [GO:0010881]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN008739	Chromosome_4A	26382	13	778	38.74990523842013	0.7866615063697703	1.074044438973349	675	0	0.4369356248179435	79	0	1.1493066308798734	596	0	2.024856863566541	91	0	unmethylated (<10%)	P07872	Peroxisomal acyl-coenzyme A oxidase 1 (ACO) (AOX) (EC 1.3.3.6) (Palmitoyl-CoA oxidase) (Peroxisomal fatty acyl-CoA oxidase) (Straight-chain acyl-CoA oxidase) [Cleaved into: Peroxisomal acyl-CoA oxidase 1, A chain; Peroxisomal acyl-CoA oxidase 1, B chain; Peroxisomal acyl-CoA oxidase 1, C chain]	cholesterol homeostasis [GO:0042632]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid biosynthetic process [GO:0006633]; fatty acid catabolic process [GO:0009062]; fatty acid oxidation [GO:0019395]; generation of precursor metabolites and energy [GO:0006091]; hydrogen peroxide biosynthetic process [GO:0050665]; lipid homeostasis [GO:0055088]; lipid metabolic process [GO:0006629]; peroxisome fission [GO:0016559]; prostaglandin metabolic process [GO:0006693]; spermatogenesis [GO:0007283]; very long-chain fatty acid beta-oxidation [GO:0140493]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN008740	Chromosome_4A	767	2	11	34.94132985658409	0.4750563063063063	18.3206106870229	11	0.09090909090909091	18.3206106870229	11	0.09090909090909091	NA	NA	NA	1.99056734637259	94	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008741	Chromosome_4A	4108	5	34	35.41869522882181	0.2657402263335337	48.95694629383045	34	0.4411764705882353	53.69458128078818	14	0.5714285714285714	45.07269789983845	20	0.35	64.97545008183306	19	0.7894736842105263	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019858	Chromosome_4A	3619	4	40	36.501796076264164	0.3318524224126469	55.00149298298	40	0.625	59.171597633136095	21	0.7142857142857143	51.53172866520788	19	0.5263157894736842	70.39064443891515	42	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008742	Chromosome_4A	288	1	6	42.013888888888886	0.4968372627947096	84.45229681978799	6	1	84.45229681978799	6	1	NA	NA	NA	49.6124031007752	15	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008743	Chromosome_4A	11939	14	356	36.89588742775777	0.8770897588762775	0.5938562867785996	356	0	0.6924279651552379	88	0	0.5624377046846077	268	0	0.4433934377771209	58	0	unmethylated (<10%)	Q9Z1N0	Peroxisomal acyl-coenzyme A oxidase 1 (AOX) (EC 1.3.3.6) (Palmitoyl-CoA oxidase) (Peroxisomal fatty acyl-CoA oxidase) (Straight-chain acyl-CoA oxidase) [Cleaved into: Peroxisomal acyl-CoA oxidase 1, A chain; Peroxisomal acyl-CoA oxidase 1, B chain; Peroxisomal acyl-CoA oxidase 1, C chain]	fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid oxidation [GO:0019395]; generation of precursor metabolites and energy [GO:0006091]; lipid homeostasis [GO:0055088]; lipid metabolic process [GO:0006629]; prostaglandin metabolic process [GO:0006693]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN008744	Chromosome_4A	411	1	18	43.7956204379562	0.9137845849802372	0.5016722408026756	18	0	0.5016722408026756	18	0	NA	NA	NA	0.6466632177961718	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008745	Chromosome_4A	2331	3	63	36.67953667953668	0.8039427151193983	1.1081948089822105	61	0	1.5037593984962405	15	0	1.0355540214014498	46	0	0.4638833664678595	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008746	Chromosome_4A	4157	2	156	42.987731537166226	0.820718039060839	0.6109535238926468	156	0	0.6224066390041494	153	0	0.40816326530612246	3	0	0.7216494845360825	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008747	Chromosome_4A	1035	1	24	41.35265700483092	0.5956834532374101	0.9933774834437086	8	0	0.9933774834437086	8	0	NA	NA	NA	0.839278220730172	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008748	Chromosome_4A	8301	4	247	37.64606673894711	0.8400458710334011	1.443736730360934	247	0	1.4207650273224044	31	0	1.445672191528545	216	0	0.516295579219103	66	0	unmethylated (<10%)	Q6P8A7	RNA-binding protein 24 (RNA-binding motif protein 24)	3'-UTR-mediated mRNA destabilization [GO:0061158]; DNA damage response [GO:0006974]; mRNA destabilization [GO:0061157]; mRNA stabilization [GO:0048255]; negative regulation of cytoplasmic translation [GO:2000766]; positive regulation of 3'-UTR-mediated mRNA stabilization [GO:1905870]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of myotube differentiation [GO:0010831]; positive regulation of skeletal muscle fiber differentiation [GO:1902811]; positive regulation of stem cell differentiation [GO:2000738]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of mRNA stability [GO:0043488]; regulation of myotube differentiation [GO:0010830]	hit with GO BP
GN008749	Chromosome_4A	432	1	7	44.44444444444444	0.3333333333333333	72.41379310344827	7	0.8571428571428571	72.41379310344827	7	0.8571428571428571	NA	NA	NA	90.44792228818133	28	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008750	Chromosome_4A	423	1	9	40.66193853427896	0.6240983606557376	90.5940594059406	9	1	90.5940594059406	9	1	NA	NA	NA	74.22434367541766	21	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008751	Chromosome_4A	8490	3	194	36.478209658421676	0.6879053356454797	1.3094489838675885	194	0	0.3472222222222222	39	0	1.4803849000740192	155	0	0.5489478499542544	51	0	unmethylated (<10%)	A2VE54	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN008752	Chromosome_4A	6271	3	154	35.050231223090414	0.7996605060943296	0.5268568491390389	154	0	0.14792899408284024	35	0	0.6065318818040435	119	0	0.5725971370143149	62	0	unmethylated (<10%)	Q9Y115	UNC93-like protein	inorganic ion homeostasis [GO:0098771]; regulation of muscle contraction [GO:0006937]; regulation of potassium ion transport [GO:0043266]; renal system process [GO:0003014]; transmembrane transport [GO:0055085]	hit with GO BP
GN008753	Chromosome_4A	8068	3	219	36.886465047099655	0.7980729448026783	0.7301346482078513	219	0	0.46547711404189296	39	0	0.7669871448633466	180	0	2.753712871287129	75	0	unmethylated (<10%)	Q6DDL7	N-acetylglucosamine transporter UNC93A (Protein unc-93 homolog A) (Unc-93A)	NA	hit, no GO BP
GN008754	Chromosome_4A	6616	5	153	35.822249093107615	0.7208608901305421	2.1648626144879266	146	0	0.5123825789923142	30	0	2.4322830292979547	116	0	0.508130081300813	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008755	Chromosome_4A	77899	40	1312	34.973491315678	0.5523606545531408	67.7632809577254	1297	0.6754047802621435	64.52473824676657	94	0.7127659574468085	67.95884212483729	1203	0.6724854530340815	1.4833924540470815	54	0	methylated (>=50%)	P10351	Xanthine dehydrogenase (XD) (EC 1.17.1.4) (Protein rosy locus)	compound eye pigmentation [GO:0048072]; determination of adult lifespan [GO:0008340]; glycerophospholipid metabolic process [GO:0006650]; purine nucleobase metabolic process [GO:0006144]; pyrimidine nucleobase metabolic process [GO:0006206]; xanthine catabolic process [GO:0009115]	hit with GO BP
GN008756	Chromosome_4A	5681	6	136	38.8663967611336	0.6363929146537842	86.04218362282879	136	0.9044117647058824	63.484087102177554	31	0.6451612903225806	89.96504515001456	105	0.9809523809523809	3.6288942143101677	51	0.0392156862745098	methylated (>=50%)	Q92005	Elongation factor 1-alpha (EF-1-alpha) (EC 3.6.5.-)	translation [GO:0006412]; translational elongation [GO:0006414]	hit with GO BP
GN008757	Chromosome_4A	997	2	32	39.518555667001	0.8429507503699006	NA	0	NA	NA	NA	NA	NA	NA	NA	2.8526148969889067	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008758	Chromosome_4A	183	1	18	49.72677595628415	1.7210031347962382	20.454545454545453	18	0	20.454545454545453	18	0	NA	NA	NA	16.666666666666668	1	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008759	Chromosome_4A	563	2	11	44.93783303730018	0.4092651334919376	55.172413793103445	5	0.6	53.46534653465346	4	0.5	66.66666666666667	1	1	18.58678955453149	31	0.03225806451612903	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008760	Chromosome_4A	41215	19	522	35.26143394395245	0.41169164996304114	85.66561844863732	510	0.9549019607843138	91.68458781362007	56	1	85.06020621530031	454	0.9493392070484582	82.31776765375854	50	0.98	methylated (>=50%)	Q92609	TBC1 domain family member 5	autophagy [GO:0006914]; macroautophagy [GO:0016236]; positive regulation of receptor internalization [GO:0002092]; response to starvation [GO:0042594]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN008761	Chromosome_4A	663	1	16	44.042232277526395	0.4978645515558267	89.60396039603961	16	1	89.60396039603961	16	1	NA	NA	NA	92.00230149597238	28	1	methylated (>=50%)	Q2TBG9	Transmembrane protein 169	NA	hit, no GO BP
GN008762	Chromosome_4A	222	1	5	49.549549549549546	0.3680371352785146	0	5	0	0	5	0	NA	NA	NA	0.7294640025372661	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008763	Chromosome_4A	759	1	1	41.23847167325428	0.03643433179723502	0	1	0	0	1	0	NA	NA	NA	0.43956043956043955	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008764	Chromosome_4A	2848	5	52	39.00983146067416	0.49392005016041995	1.184330397813544	52	0	1.3814274750575595	39	0	0.4366812227074236	13	0	0.4428452809299751	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008765	Chromosome_4A	10072	5	265	36.894360603653695	0.7735757459826131	3.3630069238377844	264	0	7.615807380266946	79	0	1.6198240720875348	185	0	1.2751159196290571	66	0	unmethylated (<10%)	O02827	Myosin light chain kinase, smooth muscle (MLCK) (smMLCK) (EC 2.7.11.18) (Telokin) [Cleaved into: Myosin light chain kinase, smooth muscle, deglutamylated form]	positive regulation of vascular associated smooth muscle contraction [GO:1904695]; tonic smooth muscle contraction [GO:0014820]	hit with GO BP
GN008766	Chromosome_4A	198	1	8	53.535353535353536	0.5647058823529412	7.5	8	0	7.5	8	0	NA	NA	NA	7.5	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008767	Chromosome_4A	13788	7	195	34.58804757760371	0.4741620431931771	88.84156081235263	195	0.9846153846153847	93.60068259385666	20	1	88.37578288100208	175	0.9828571428571429	93.77179870453413	28	1	methylated (>=50%)	O88873	Glucocorticoid modulatory element-binding protein 2 (GMEB-2)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN008768	Chromosome_4A	60857	22	779	34.5974990551621	0.4326058058470274	85.8952478476884	767	0.9661016949152542	89.12248628884826	41	0.975609756097561	85.75554940054603	726	0.9655647382920111	63.49456023069865	62	0.6612903225806451	methylated (>=50%)	O60645	Exocyst complex component 3 (Exocyst complex component Sec6)	exocyst localization [GO:0051601]; exocytosis [GO:0006887]; membrane fission [GO:0090148]; mitotic cytokinesis [GO:0000281]; vesicle docking involved in exocytosis [GO:0006904]; vesicle tethering involved in exocytosis [GO:0090522]	hit with GO BP
GN008769	Chromosome_4A	648	2	5	39.660493827160494	0.1965780851838369	56.52173913043478	5	0.6	56.52173913043478	5	0.6	NA	NA	NA	2.134646962233169	32	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008770	Chromosome_4A	3877	4	80	40.41784885220531	0.5053259952230597	87.79139629896659	80	0.925	80.0657894736842	45	0.8666666666666667	92.2377887163953	35	1	0.7891414141414141	49	0	methylated (>=50%)	Q8IYG6	Leucine-rich repeat-containing protein 56	NA	hit, no GO BP
GN008771	Chromosome_4A	591	1	35	44.67005076142132	1.1896135265700483	0.8979591836734694	35	0	0.8979591836734694	35	0	NA	NA	NA	0.5055880787653007	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008772	Chromosome_4A	240	1	10	49.166666666666664	0.6926406926406926	0.9727626459143969	10	0	0.9727626459143969	10	0	NA	NA	NA	0.4063664070436844	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008773	Chromosome_4A	1380	3	52	40.289855072463766	0.9308841843088418	0.855188141391106	52	0	0.9749303621169917	47	0	0.31446540880503143	5	0	0.7068607068607069	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008774	Chromosome_4A	486	1	4	40.946502057613166	0.21016216216216216	0	4	0	0	4	0	NA	NA	NA	0.7606084867894315	61	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008775	Chromosome_4A	1232	3	47	40.34090909090909	0.9385373443983402	0.42042042042042044	47	0	0.25996533795493937	37	0	0.7827788649706457	10	0	0.4578987534978377	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008776	Chromosome_4A	11081	13	219	31.802183918418915	0.7823559280232507	0.5401512423478574	202	0	0.42539267015706805	54	0	0.583705911574764	148	0	0.5248533497993207	65	0	unmethylated (<10%)	Q0V8J4	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN008777	Chromosome_4A	716	3	20	34.91620111731844	0.9170081967213115	0.5123825789923142	20	0	0.6030150753768844	18	0	0	2	0	0.2915451895043732	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008778	Chromosome_4A	23539	20	561	34.90377671099027	0.7830120378197302	0.6325002564190229	561	0	0.4672897196261682	112	0	0.6641946130964509	449	0	0.45745654162854527	35	0	unmethylated (<10%)	Q9JHA8	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN008779	Chromosome_4A	381	1	25	55.90551181102362	0.8556413941789436	0.5681818181818182	12	0	0.5681818181818182	12	0	NA	NA	NA	0.5491990846681922	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008780	Chromosome_4A	418	2	23	41.38755980861244	1.285294117647059	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008781	Chromosome_4A	1154	2	9	36.39514731369151	0.23559568097268851	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN008782	Chromosome_4A	2019	2	27	33.53145121347202	0.476753948680275	10	2	0	NA	NA	NA	10	2	0	2.7027027027027026	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008783	Chromosome_4A	456	1	28	53.728070175438596	0.8685714285714285	NA	0	NA	NA	NA	NA	NA	NA	NA	2.7027027027027026	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008784	Chromosome_4A	418	2	23	41.14832535885167	1.3005952380952381	0	23	0	0	20	0	0	3	0	0.5594405594405595	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008785	Chromosome_4A	1365	2	34	38.827838827838825	0.6611111111111111	0.7415858528237308	34	0	0.8136094674556213	26	0	0.49875311720698257	8	0	0.7007007007007007	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008786	Chromosome_4A	396	1	19	44.94949494949495	0.9509605662285137	1.0344827586206897	19	0	1.0344827586206897	19	0	NA	NA	NA	0.547945205479452	66	0	unmethylated (<10%)	Q5ZMD4	Tripartite motif-containing protein 59	innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]	hit with GO BP
GN008787	Chromosome_4A	1464	1	33	37.295081967213115	0.6566985645933014	2.1902377972465583	33	0	2.1902377972465583	33	0	NA	NA	NA	0.6428387760349704	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008788	Chromosome_4A	15175	21	414	37.82537067545305	0.7627216797031499	0.619928431026662	411	0	0.6430277420540144	103	0	0.6111959994443673	308	0	0.5697050938337802	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008789	Chromosome_4A	2327	2	18	36.01203266007735	0.23858917616500624	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN008790	Chromosome_4A	4901	5	50	32.40155070393797	0.3910838312650018	12.408759124087592	5	0	NA	NA	NA	12.408759124087592	5	0	NA	NA	NA	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008791	Chromosome_4A	456	1	28	53.728070175438596	0.8685714285714285	NA	0	NA	NA	NA	NA	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008792	Chromosome_4A	8288	9	125	33.09604247104247	0.5514856576466467	92.6489226869455	125	0.992	94.46564885496183	27	1	92.19689775245331	98	0.9897959183673469	53.99548532731377	35	0.6285714285714286	methylated (>=50%)	Q99K70	Ras-related GTP-binding protein C (Rag C) (RagC) (EC 3.6.5.-) (GTPase-interacting protein 2) (TIB929)	autophagosome assembly [GO:0000045]; cellular response to amino acid starvation [GO:0034198]; cellular response to nutrient levels [GO:0031669]; cellular response to starvation [GO:0009267]; cytoplasmic translation [GO:0002181]; lysosome organization [GO:0007040]; negative regulation of autophagy [GO:0010507]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of translational initiation [GO:0045947]; positive regulation of TOR signaling [GO:0032008]; positive regulation of TORC1 signaling [GO:1904263]; positive regulation of translational initiation [GO:0045948]; protein destabilization [GO:0031648]; protein localization to lysosome [GO:0061462]; protein localization to membrane [GO:0072657]; regulation of TOR signaling [GO:0032006]; regulation of TORC1 signaling [GO:1903432]; response to amino acid [GO:0043200]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; TORC1 signaling [GO:0038202]	hit with GO BP
GN008793	Chromosome_4A	51681	15	813	36.08289313287282	0.4840831730356959	91.0322695667677	755	0.9774834437086093	95.53478712357217	36	1	90.85367109463495	719	0.9763560500695411	96.86423156443831	42	1	methylated (>=50%)	Q5U4X5	Kinetochore protein NDC80 homolog (Kinetochore protein Hec1) (Kinetochore-associated protein 2)	attachment of mitotic spindle microtubules to kinetochore [GO:0051315]; chromosome segregation [GO:0007059]; G2/MI transition of meiotic cell cycle [GO:0008315]; metaphase chromosome alignment [GO:0051310]; mitotic spindle organization [GO:0007052]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; spindle assembly involved in female meiosis I [GO:0007057]	hit with GO BP
GN008794	Chromosome_4A	7736	7	142	34.307135470527406	0.6241882374332706	81.46714314075838	142	0.8732394366197183	84.47146866230122	14	0.9285714285714286	81.1104941699056	128	0.8671875	45.289726270885176	46	0.5217391304347826	methylated (>=50%)	A1A5V7	Transmembrane protein 41B (Protein stasimon)	autophagosome assembly [GO:0000045]; motor neuron axon guidance [GO:0008045]	hit with GO BP
GN008795	Chromosome_4A	1998	1	46	40.94094094094094	0.5787037911558587	65.94827586206897	46	0.717391304347826	65.94827586206897	46	0.717391304347826	NA	NA	NA	39.163023110555905	54	0.5185185185185185	methylated (>=50%)	Q2KHP8	S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 (EC 4.1.3.44) (Radical S-adenosyl methionine and flavodoxin domain-containing protein 1) (tRNA wybutosine-synthesizing protein 1 homolog) (tRNA-yW-synthesizing protein)	wybutosine biosynthetic process [GO:0031591]	hit with GO BP
GN008796	Chromosome_4A	14428	14	223	34.994455225949544	0.5051473328855617	88.49738391105298	215	0.9906976744186047	80.34557235421167	17	1	89.16504510879179	198	0.98989898989899	81.41650422352177	21	1	methylated (>=50%)	O95922	Polyglutamylase complex subunit TTLL1 (EC 6.3.2.-) (Tubulin polyglutamylase TTLL1) (Tubulin polyglutamylase complex subunit 3) (PGs3) (Tubulin--tyrosine ligase-like protein 1)	microtubule cytoskeleton organization [GO:0000226]; protein polyglutamylation [GO:0018095]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN008797	Chromosome_4A	25321	15	455	35.58706212234904	0.5684251102875623	87.33108720066659	442	0.9660633484162896	72.89461573861021	36	0.8055555555555556	88.56468737711364	406	0.9802955665024631	58.051489146895506	40	0.65	methylated (>=50%)	Q5ZL77	Chaperone Ric-8A (Synembryn-A)	G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN008798	Chromosome_4A	18133	5	252	36.77273479291899	0.41177717341349873	86.48164084911073	252	0.9722222222222222	87.5	74	0.9459459459459459	86.15936555891238	178	0.9831460674157303	32.8732747804266	45	0.4888888888888889	methylated (>=50%)	Q7S8J7	Dicer-like protein 1 [Includes: Endoribonuclease dcl-1 (EC 3.1.26.-); ATP-dependent helicase dcl-1 (EC 3.6.4.-)]	siRNA processing [GO:0030422]	hit with GO BP
GN008799	Chromosome_4A	747	1	28	45.78313253012048	0.7216146282559944	0.7884362680683311	28	0	0.7884362680683311	28	0	NA	NA	NA	1.4546965918536992	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008800	Chromosome_4A	3152	3	94	38.8007614213198	0.7937377103637464	2.523977788995457	94	0	3.005008347245409	27	0	2.3154848046309695	67	0	0.6975585450921774	49	0	unmethylated (<10%)	P51452	Dual specificity protein phosphatase 3 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase VHR) (Vaccinia H1-related phosphatase) (VHR)	cellular response to epidermal growth factor stimulus [GO:0071364]; dephosphorylation [GO:0016311]; negative regulation of cell migration [GO:0030336]; negative regulation of chemotaxis [GO:0050922]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of JNK cascade [GO:0046329]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; peptidyl-tyrosine dephosphorylation [GO:0035335]; positive regulation of focal adhesion disassembly [GO:0120183]; positive regulation of mitotic cell cycle [GO:0045931]; regulation of focal adhesion assembly [GO:0051893]	hit with GO BP
GN008801	Chromosome_4A	1554	1	80	43.11454311454312	1.1078140454995054	0.38058991436726924	78	0	0.38058991436726924	78	0	NA	NA	NA	0.5455165359699966	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008802	Chromosome_4A	1057	2	11	33.01797540208136	0.3882914774245258	66.66666666666667	9	0.7777777777777778	67.26943942133815	8	0.875	42.857142857142854	1	0	53.21507760532151	10	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008803	Chromosome_4A	7171	5	181	35.8666852600753	0.7849685547143133	0.5815229317533465	181	0	0.6959706959706959	74	0	0.5325814536340853	107	0	2.594735859622923	80	0	unmethylated (<10%)	Q9UMX9	Membrane-associated transporter protein (Melanoma antigen AIM1) (Protein AIM-1) (Solute carrier family 45 member 2)	developmental pigmentation [GO:0048066]; lysosomal lumen pH elevation [GO:0035752]; melanin biosynthetic process from tyrosine [GO:0006583]; sucrose transport [GO:0015770]	hit with GO BP
GN002972	Chromosome_4A	777	1	20	49.163449163449165	0.43280880100264585	0.37593984962406013	15	0	0.37593984962406013	15	0	NA	NA	NA	0.33222591362126247	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002973	Chromosome_4A	351	1	14	50.427350427350426	0.6332474226804123	NA	0	NA	NA	NA	NA	NA	NA	NA	0.33222591362126247	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002974	Chromosome_4A	441	1	11	42.40362811791383	0.5561797752808989	0	9	0	0	9	0	NA	NA	NA	1.492537313432836	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008804	Chromosome_4A	492	1	42	48.170731707317074	1.483204134366925	0.4713275726630008	42	0	0.4713275726630008	42	0	NA	NA	NA	0.5405405405405406	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008805	Chromosome_4A	9657	3	317	38.66625245935591	0.8787053940479471	0.5523495465787304	317	0	0.528071150639244	109	0	0.5625879043600562	208	0	0.462198745460548	50	0	unmethylated (<10%)	Q0EEE2	Patched domain-containing protein 3 (RND-type protein RNDEu-3)	NA	hit, no GO BP
GN008806	Chromosome_4A	582	1	26	41.75257731958763	1.0313522355507088	4.441260744985673	26	0	4.441260744985673	26	0	NA	NA	NA	2.4519549370444005	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008807	Chromosome_4A	18355	12	498	38.04412966494143	0.7503511734018409	0.9187423438138016	475	0	0.9202453987730062	70	0	0.9185115402731983	405	0	0.5524861878453039	28	0	unmethylated (<10%)	Q711G3	Isoamyl acetate-hydrolyzing esterase 1 homolog (EC 3.1.-.-) (Hypertrophic agonist-responsive protein B64)	gene expression [GO:0010467]	hit with GO BP
GN008808	Chromosome_4A	7863	14	241	35.965916316927384	0.9486146597571524	0.5415825224894437	223	0	0.5164737310774711	101	0	0.5682894487592347	122	0	0.43478260869565216	3	0	unmethylated (<10%)	Q9TU53	Cubilin	NA	hit, no GO BP
GN008809	Chromosome_4A	1202	2	45	37.021630615640596	1.1028872033276242	0.5574614065180102	45	0	0.5319148936170213	26	0	0.5813953488372093	19	0	0.5945303210463734	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008810	Chromosome_4A	2464	3	69	38.758116883116884	0.7485207100591716	0.5124312013664832	69	0	0.6548175865294668	20	0	0.47619047619047616	49	0	3.6214644462067143	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008811	Chromosome_4A	674	2	4	36.49851632047478	0.17821258593336858	0.26737967914438504	4	0	0.26737967914438504	4	0	NA	NA	NA	1.4098201263976664	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008812	Chromosome_4A	1076	3	9	35.87360594795539	0.26252439817826934	0.6600660066006601	9	0	0.6600660066006601	9	0	NA	NA	NA	0.6008010680907877	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008813	Chromosome_4A	1019	2	14	39.450441609421	0.35381944444444446	0.5045408678102926	14	0	0.6198347107438017	8	0	0.39447731755424065	6	0	0.4961020552799433	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008814	Chromosome_4A	2455	3	57	36.08961303462322	0.7149754751686083	0.5098572399728076	43	0	0.449438202247191	7	0	0.5206247496996396	36	0	0.4632693580410324	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008815	Chromosome_4A	3330	3	93	37.087087087087085	0.8143008145900493	91.56088715301995	93	1	94.18360196215838	28	1	90.9090909090909	65	1	49.036918138041734	32	0.59375	methylated (>=50%)	Q6NZG4	DNA damage-induced apoptosis suppressor protein (Nitric oxide-inducible gene protein)	cellular response to cytokine stimulus [GO:0071345]; cellular response to gamma radiation [GO:0071480]; cellular response to hydroperoxide [GO:0071447]; cellular response to UV [GO:0034644]; DNA damage response [GO:0006974]; hemopoiesis [GO:0030097]; negative regulation of fibroblast apoptotic process [GO:2000270]; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage [GO:1902230]; regulation of cell cycle [GO:0051726]; regulation of DNA stability [GO:0097752]; spermatid development [GO:0007286]	hit with GO BP
GN008816	Chromosome_4A	2154	3	58	37.41875580315692	0.770780763179813	1.155268022181146	56	0	1.3910355486862442	22	0	1.054713249835201	34	0	0.7256894049346879	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008817	Chromosome_4A	8473	9	223	37.66080490971321	0.7424366495479318	1.2137989778534923	220	0	1.0360843158270812	66	0	1.2892461701804945	154	0	0.870105655686762	29	0	unmethylated (<10%)	P15287	Adenosine deaminase AGSA (EC 3.5.4.4) (Atrial gland-specific antigen) (AGSA) (Mollusk-derived growth factor) (MDGF)	adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]	hit with GO BP
GN008818	Chromosome_4A	9257	8	127	34.622447877282056	0.46053752143763166	86.51592281283295	126	0.9206349206349206	75.30186608122942	21	0.8571428571428571	87.87154989384288	105	0.9333333333333333	0.6816245384833854	63	0	methylated (>=50%)	Q9H6K1	Protein ILRUN (Inflammation and lipid regulator with UBA-like and NBR1-like domains protein)	macroautophagy [GO:0016236]; negative regulation of defense response to virus [GO:0050687]; negative regulation of DNA binding [GO:0043392]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of tumor necrosis factor production [GO:0032720]; negative regulation of type I interferon production [GO:0032480]	hit with GO BP
GN008819	Chromosome_4A	1434	1	15	42.46861924686193	0.2382851445663011	90	12	1	90	12	1	NA	NA	NA	90.3782894736842	20	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008820	Chromosome_4A	4876	5	115	38.10500410172272	0.6505466661716661	0.5519982336056525	110	0	0.6299212598425197	28	0	0.5216324025774778	82	0	0.9040880503144654	60	0	unmethylated (<10%)	B0BNF8	Protein HTATIP2	positive regulation of programmed cell death [GO:0043068]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autophosphorylation [GO:0046777]	hit with GO BP
GN008821	Chromosome_4A	450	1	17	44.44444444444444	0.8406593406593407	0.7616974972796517	17	0	0.7616974972796517	17	0	NA	NA	NA	1.5655577299412915	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008822	Chromosome_4A	642	1	21	40.654205607476634	0.7968085106382978	0.5773672055427251	21	0	0.5773672055427251	21	0	NA	NA	NA	0.5448106782892945	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008823	Chromosome_4A	3389	3	60	37.0905871938625	0.5179818729270791	6.600517687661777	60	0	12.23021582733813	30	0	3.4366576819407006	30	0	0.9664292980671414	55	0	unmethylated (<10%)	Q5GLH2	Tribbles homolog 2 (TRB-2)	negative regulation of fat cell differentiation [GO:0045599]; negative regulation of interleukin-10 production [GO:0032693]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; regulation of MAP kinase activity [GO:0043405]	hit with GO BP
GN008824	Chromosome_4A	965	3	10	33.26424870466321	0.38145307929480593	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	A1Z7A6	ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein	compound eye morphogenesis [GO:0001745]; mitotic cleavage furrow ingression [GO:1990386]; positive regulation of protein localization [GO:1903829]; regulation of Golgi organization [GO:1903358]	hit with GO BP
GN008825	Chromosome_4A	1869	1	49	40.34242910647405	0.719721796534245	0.5367599219258296	40	0	0.5367599219258296	40	0	NA	NA	NA	0.5319148936170213	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008826	Chromosome_4A	1944	1	41	40.58641975308642	0.5619923285198556	0.4886391399951136	41	0	0.4886391399951136	41	0	NA	NA	NA	0.5342278543918499	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008827	Chromosome_4A	5760	4	149	39.375	0.6784876012999919	0.7170795306388527	52	0	0.702247191011236	45	0	0.9090909090909091	7	0	0.4920049200492005	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008828	Chromosome_4A	7878	6	208	39.81975120588982	0.6762410364090171	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008829	Chromosome_4A	2936	3	73	39.40735694822888	0.6515281400283316	0	3	0	0	3	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008830	Chromosome_4A	433	2	16	42.494226327944574	0.8200757575757576	0.411522633744856	16	0	0.48	14	0	0	2	0	1.2021036814425243	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008831	Chromosome_4A	1568	5	49	40.17857142857143	0.775446351974647	0.6144393241167435	49	0	0.6134969325153374	32	0	0.6163328197226502	17	0	0.8835758835758836	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008832	Chromosome_4A	378	1	22	47.08994708994709	1.0498674409796742	0.6451612903225806	22	0	0.6451612903225806	22	0	NA	NA	NA	0.5924170616113744	51	0	unmethylated (<10%)	O42412	Thyroxine 5-deiodinase (EC 1.21.99.3) (5DIII) (DIOIII) (Type 3 DI) (Type III iodothyronine deiodinase)	thyroid hormone catabolic process [GO:0042404]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN008833	Chromosome_4A	10546	4	195	35.75763322586763	0.578456627637269	85.84179747614651	194	0.9123711340206185	84.46833930704898	17	0.8823529411764706	85.93634344929681	177	0.9152542372881356	0.37006578947368424	37	0	methylated (>=50%)	Q0P5F3	Protein lin-7 homolog C (Lin-7C)	neurotransmitter secretion [GO:0007269]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; synaptic vesicle transport [GO:0048489]	hit with GO BP
GN008834	Chromosome_4A	1360	2	55	44.19117647058823	0.830557406173662	1.566579634464752	55	0	1.6249153689911984	54	0	0	1	0	0.5530973451327433	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008835	Chromosome_4A	1817	2	54	38.80022014309301	0.7934754480170796	0.4362050163576881	40	0	0.6639004149377593	17	0	0	23	0	0.4502251125562781	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008836	Chromosome_4A	429	1	20	44.05594405594405	0.9608062709966405	0.23255813953488372	20	0	0.23255813953488372	20	0	NA	NA	NA	0.1292824822236587	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008837	Chromosome_4A	729	1	27	44.718792866941016	0.7409373235460192	0.32751091703056767	27	0	0.32751091703056767	27	0	NA	NA	NA	0.47867711053089645	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008838	Chromosome_4A	79371	13	1182	35.22571216187272	0.48380291855054863	32.89789600050547	1146	0.35602094240837695	50.67425831585256	102	0.6078431372549019	31.908755898684365	1044	0.3314176245210728	0.4791056694170881	57	0	sparse (10-50%)	P28166	Zinc finger protein 1 (Zinc finger homeodomain protein 1)	axonal fasciculation [GO:0007413]; central nervous system development [GO:0007417]; epithelial to mesenchymal transition [GO:0001837]; garland nephrocyte differentiation [GO:0061321]; germ cell migration [GO:0008354]; hemocyte development [GO:0007516]; lymph gland development [GO:0048542]; mesoderm development [GO:0007498]; motor neuron axon guidance [GO:0008045]; muscle cell cellular homeostasis [GO:0046716]; negative regulation of muscle cell differentiation [GO:0051148]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; regulation of transcription by RNA polymerase II [GO:0006357]; somatic stem cell division [GO:0048103]; somatic stem cell population maintenance [GO:0035019]	hit with GO BP
GN008839	Chromosome_4A	2661	2	40	40.51108605787298	0.37266167403657297	86.76103247293922	40	0.95	89.68888888888888	38	0.9736842105263158	43.421052631578945	2	0.5	12.383770076077768	50	0.06	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008840	Chromosome_4A	20755	8	343	36.0539629005059	0.5086442802065739	82.98643882569172	342	0.9824561403508771	88.72521246458923	45	0.9777777777777777	82.43493411739082	297	0.9831649831649831	11.175337186897881	44	0.11363636363636363	methylated (>=50%)	Q5SUD9	Chaperonin-containing T-complex member BBS12 (Bardet-Biedl syndrome 12 protein homolog)	chaperone-mediated protein complex assembly [GO:0051131]; eating behavior [GO:0042755]; intraciliary transport [GO:0042073]; negative regulation of fat cell differentiation [GO:0045599]; photoreceptor cell maintenance [GO:0045494]	hit with GO BP
GN008841	Chromosome_4A	14872	9	147	34.13125336202259	0.34009171125003673	76.2640099626401	146	0.8904109589041096	86.48967551622418	35	0.9714285714285714	73.52801894238358	111	0.8648648648648649	12.8428927680798	43	0.06976744186046512	methylated (>=50%)	Q91YN5	UDP-N-acetylhexosamine pyrophosphorylase (Protein-pyrophosphorylation enzyme) (EC 2.7.4.-) (UDP-N-acetylgalactosamine pyrophosphorylase) (EC 2.7.7.83) (UDP-N-acetylglucosamine pyrophosphorylase) (EC 2.7.7.23)	antiviral innate immune response [GO:0140374]; positive regulation of type I interferon production [GO:0032481]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]; UDP-N-acetylglucosamine metabolic process [GO:0006047]	hit with GO BP
GN008842	Chromosome_4A	1290	4	15	32.17054263565891	0.44943559251172943	84.58574181117534	15	1	84.39897698209718	8	1	84.69860896445131	7	1	87.7385959236493	62	0.9516129032258065	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008843	Chromosome_4A	4497	2	109	35.512563931509895	0.7704748222245974	87.9746835443038	109	0.908256880733945	55.303030303030305	13	0.5384615384615384	90.00943618778014	96	0.9583333333333334	5.334150827713059	46	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008844	Chromosome_4A	4126	4	146	39.723703344643724	0.8972638038637413	0.5728011825572801	144	0	0.5340453938584779	93	0	0.6003159557661928	51	0	0.6984866123399301	47	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN008845	Chromosome_4A	2790	5	92	36.738351254480285	0.9802783336643193	0.9575104727707959	92	0	0.36585365853658536	18	0	1.0732172668733604	74	0	0.46434494195688225	55	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008846	Chromosome_4A	5627	5	119	35.04531722054381	0.6891064430613186	0.6727211570803902	108	0	0.8810572687224669	18	0	0.6457739791073125	90	0	0.3598298985933922	61	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008847	Chromosome_4A	1781	5	54	37.90005614823133	0.8458872783563186	0.34071550255536626	54	0	0.49261083743842365	19	0	0.2875215641173088	35	0	0.3932244404113733	50	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008848	Chromosome_4A	198	1	11	50.505050505050505	0.874347651545564	0.7220216606498195	11	0	0.7220216606498195	11	0	NA	NA	NA	0.4059539918809202	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008849	Chromosome_4A	1723	5	45	38.7695879280325	0.6989479946994077	0.7434944237918215	45	0	0.5997001499250375	17	0	0.8447729672650475	28	0	0.3334722801167153	46	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008850	Chromosome_4A	485	2	17	38.55670103092783	0.9433638443935927	1.375515818431912	17	0	1.3015184381778742	11	0	1.5037593984962405	6	0	0.3937007874015748	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008851	Chromosome_4A	1715	5	42	38.89212827988338	0.6496212121212122	0.7485029940119761	42	0	0.9933774834437086	21	0	0.546448087431694	21	0	0.4752475247524752	50	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008852	Chromosome_4A	1524	5	37	37.664041994750654	0.685251798561151	0.5330490405117271	37	0	0.6611570247933884	17	0	0.47206923682140045	20	0	0.6698564593301436	44	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008853	Chromosome_4A	3082	5	97	38.44905905256327	0.8515849323184905	0.5023723137036004	97	0	0.6075334143377886	20	0	0.47101449275362317	77	0	0.676818950930626	47	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN008854	Chromosome_4A	1032	1	53	44.08914728682171	1.0570500927643784	0.8871989860583016	53	0	0.8871989860583016	53	0	NA	NA	NA	0.5378151260504201	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008855	Chromosome_4A	379	2	5	39.050131926121374	0.36088364121119787	0.3225806451612903	5	0	0.3225806451612903	5	0	NA	NA	NA	1.2611879576891782	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008856	Chromosome_4A	210	1	4	46.19047619047619	0.358974358974359	1.3333333333333333	4	0	1.3333333333333333	4	0	NA	NA	NA	2.489795918367347	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008857	Chromosome_4A	1701	2	60	38.56554967666079	0.9490863439810294	0.4645760743321719	60	0	0.40816326530612246	21	0	0.4990642545227698	39	0	0.8468424872973627	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018074	Chromosome_4A	463	1	8	42.33261339092873	0.3863162286191072	0.27932960893854747	8	0	0.27932960893854747	8	0	NA	NA	NA	0.6104328523862376	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008858	Chromosome_4A	231	1	3	43.722943722943725	0.275	1.3986013986013985	3	0	1.3986013986013985	3	0	NA	NA	NA	0.9824561403508771	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008859	Chromosome_4A	1014	1	47	41.02564102564103	1.1017917003814588	0.6784968684759917	47	0	0.6784968684759917	47	0	NA	NA	NA	0.5973715651135006	57	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN008860	Chromosome_4A	192	1	9	52.083333333333336	0.75	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8781558726673985	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008861	Chromosome_4A	1701	2	32	41.91651969429747	0.43282442748091604	0.4909983633387889	32	0	0.3768844221105528	21	0	0.704225352112676	11	0	0.5794302269435055	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008862	Chromosome_4A	975	3	29	44.82051282051282	0.6632653061224489	0.47365304914150386	29	0	0.5594405594405595	25	0	0	4	0	0.8225616921269095	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008863	Chromosome_4A	1055	2	6	29.28909952606635	0.26552013422818793	0.42105263157894735	6	0	0	1	0	0.4576659038901602	5	0	3.002040221509764	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008864	Chromosome_4A	459	1	12	49.23747276688453	0.553012048192771	0.6825938566552902	12	0	0.6825938566552902	12	0	NA	NA	NA	0.4573170731707317	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008865	Chromosome_4A	369	1	7	47.96747967479675	0.41183035714285715	1.1904761904761905	7	0	1.1904761904761905	7	0	NA	NA	NA	0.78031212484994	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008866	Chromosome_4A	1519	3	9	37.26135615536537	0.17619765688435216	70.27027027027027	9	0.6666666666666666	94.04761904761905	2	1	64.08668730650155	7	0.5714285714285714	77.5623268698061	11	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008867	Chromosome_4A	1631	3	72	40.4659717964439	1.0928379988088148	0.5519144532597448	72	0	0.6042296072507553	62	0	0.3436426116838488	10	0	0.6276747503566333	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008868	Chromosome_4A	8457	11	188	34.161050017736784	0.762005089887802	0.5670481990969233	188	0	0.783289817232376	65	0	0.48231511254019294	123	0	0.5836575875486382	47	0	unmethylated (<10%)	Q9JLB4	Cubilin (Intrinsic factor-cobalamin receptor)	cobalamin catabolic process [GO:0042366]; cobalamin transport [GO:0015889]; endocytic hemoglobin import into cell [GO:0020028]; in utero embryonic development [GO:0001701]; lipoprotein transport [GO:0042953]; receptor-mediated endocytosis [GO:0006898]; response to bacterium [GO:0009617]; response to nutrient [GO:0007584]	hit with GO BP
GN008869	Chromosome_4A	1011	1	55	40.75173095944609	1.31640625	0.6074168797953964	55	0	0.6074168797953964	55	0	NA	NA	NA	0.8845829823083403	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008870	Chromosome_4A	3324	6	85	34.356197352587245	0.8681117785322539	0.6512463507747586	85	0	0.7236842105263158	36	0	0.6137061029662462	49	0	0.7565643079661771	46	0	unmethylated (<10%)	F1RWC3	Cubilin (Intrinsic factor-cobalamin receptor)	NA	hit, no GO BP
GN008871	Chromosome_4A	16858	17	224	33.72286154941274	0.4702169562371805	69.7502142769683	221	0.7194570135746606	66.8581275129236	29	0.6206896551724138	70.0952511478106	192	0.734375	67.37288135593221	36	0.6666666666666666	methylated (>=50%)	Q5RKH6	Protein OS-9	endoplasmic reticulum unfolded protein response [GO:0030968]; ERAD pathway [GO:0036503]; negative regulation of retrograde protein transport, ER to cytosol [GO:1904153]; protein retention in ER lumen [GO:0006621]; protein targeting [GO:0006605]; protein ubiquitination [GO:0016567]; response to endoplasmic reticulum stress [GO:0034976]; retrograde protein transport, ER to cytosol [GO:0030970]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN008872	Chromosome_4A	9356	4	52	32.19324497648568	0.21765196676024204	86.32091890010442	50	1	85.19781718963165	23	1	87.4911158493248	27	1	92.62490087232355	24	1	methylated (>=50%)	Q32PP1	MRN complex-interacting protein (MRN-interacting protein)	DNA damage response [GO:0006974]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of protein kinase activity [GO:0045860]; protein localization to chromatin [GO:0071168]; regulation of double-strand break repair via nonhomologous end joining [GO:2001032]; response to ionizing radiation [GO:0010212]	hit with GO BP
GN008873	Chromosome_4A	1040	3	31	32.59615384615385	1.1328976034858387	0.580046403712297	28	0	0.9208103130755064	17	0	0	11	0	8.341416100872939	45	0	unmethylated (<10%)	P14198	AAC-rich mRNA AAC4 protein	NA	hit, no GO BP
GN008874	Chromosome_4A	6457	7	89	36.410097568530276	0.4159203584016675	88.32191780821918	89	0.9775280898876404	91.41696292534282	29	1	86.74761043657969	60	0.9666666666666667	90.73446327683615	35	1	methylated (>=50%)	Q6DE37	Glucoside xylosyltransferase 2 (EC 2.4.2.42) (Glycosyltransferase 8 domain-containing protein 4)	protein O-linked glycosylation via glucose [GO:0180059]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN008875	Chromosome_4A	5679	7	91	35.904208487409754	0.4990844772538953	85.29202279202279	91	0.978021978021978	81.90789473684211	28	0.9642857142857143	86.5478515625	63	0.9841269841269841	80.03132341425216	42	1	methylated (>=50%)	Q6DJM6	Integrator complex subunit 12 (Int12)	RNA polymerase II transcription initiation surveillance [GO:0160240]; snRNA 3'-end processing [GO:0034472]	hit with GO BP
GN008876	Chromosome_4A	3850	3	63	36.12987012987013	0.5033055690434393	83.70640291514836	62	0.8870967741935484	91.970802919708035	3	1	83.40080971659918	59	0.8813559322033898	37.30484798685292	30	0.7	methylated (>=50%)	Q8K2P6	Rieske domain-containing protein	NA	hit, no GO BP
GN008877	Chromosome_4A	11134	11	167	36.7163642895635	0.44646027059260535	85.28306059265812	164	0.9573170731707317	88.26530612244898	46	1	84.45793337097685	118	0.940677966101695	93.27097947518835	44	1	methylated (>=50%)	Q9NTG7	NAD-dependent protein deacetylase sirtuin-3, mitochondrial (hSIRT3) (EC 2.3.1.286) (NAD-dependent protein delactylase sirtuin-3) (EC 2.3.1.-) (Regulatory protein SIR2 homolog 3) (SIR2-like protein 3)	aerobic respiration [GO:0009060]; cellular response to stress [GO:0033554]; mitochondrial fusion [GO:0008053]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; peptidyl-lysine deacetylation [GO:0034983]; positive regulation of catalase activity [GO:1902553]; positive regulation of ceramide biosynthetic process [GO:2000304]; positive regulation of insulin secretion [GO:0032024]; positive regulation of oxidative phosphorylation [GO:1903862]; positive regulation of superoxide dismutase activity [GO:1901671]; protein deacetylation [GO:0006476]	hit with GO BP
GN008878	Chromosome_4A	3053	3	73	36.095643629217165	0.7351530544926771	92.80846484935438	73	0.9726027397260274	96.47527003979533	26	1	91.11867959130207	47	0.9574468085106383	28.071833648393195	31	0.2903225806451613	methylated (>=50%)	Q8AVR2	FGFR1 oncogene partner 2 homolog	response to wounding [GO:0009611]	hit with GO BP
GN008879	Chromosome_4A	3343	3	117	37.481304217768475	1.0052714094787705	0.9559110417479516	111	0	0.7518796992481203	29	0	1.0093549975381586	82	0	0.5775577557755776	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008880	Chromosome_4A	6167	9	92	36.92232852278255	0.43991867888861147	94.2759900990099	63	1	93.81294964028777	15	1	94.402837997635	48	1	82.79569892473118	11	0.9090909090909091	methylated (>=50%)	Q922R8	Protein disulfide-isomerase A6 (EC 5.3.4.1) (Thioredoxin domain-containing protein 7)	IRE1-mediated unfolded protein response [GO:0036498]; negative regulation of IRE1-mediated unfolded protein response [GO:1903895]; platelet activation [GO:0030168]; platelet aggregation [GO:0070527]	hit with GO BP
GN008881	Chromosome_4A	5047	4	87	37.11115514166832	0.5042872959141484	78.0753733112112	87	0.9540229885057471	84.1105354058722	13	0.9230769230769231	77.11538461538461	74	0.9594594594594594	64.22801753981075	51	0.6078431372549019	methylated (>=50%)	Q8VCM4	Lipoyl amidotransferase LIPT1, mitochondrial (EC 2.3.1.200) (Lipoate biosynthesis protein) (Lipoate-protein ligase) (Lipoyl ligase) (Lipoyltransferase 1) (EC 2.3.1.-)	protein lipoylation [GO:0009249]	hit with GO BP
GN008882	Chromosome_4A	6383	10	92	36.39354535484882	0.4445302363465973	91.4418284928682	92	1	92.63913824057451	38	1	90.69896964633807	54	1	94.50836820083683	59	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008883	Chromosome_4A	255	1	15	45.88235294117647	1.5740740740740742	0.9803921568627451	15	0	0.9803921568627451	15	0	NA	NA	NA	2.519496100779844	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008884	Chromosome_4A	1274	2	7	38.93249607535322	0.21875	1.2096774193548387	7	0	0.704225352112676	5	0	1.8867924528301887	2	0	1.9918849133161196	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008885	Chromosome_4A	246	1	10	48.78048780487805	0.6902356902356902	0	10	0	0	10	0	NA	NA	NA	0.9313154831199069	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008886	Chromosome_4A	22152	10	332	35.08486818345973	0.4881009180881748	85.999810999811	331	0.9486404833836858	89.02640264026402	21	0.9047619047619048	85.81595829991981	310	0.9516129032258065	0.671892497200448	52	0	methylated (>=50%)	Q5T2R2	All trans-polyprenyl-diphosphate synthase PDSS1 (All-trans-decaprenyl-diphosphate synthase subunit 1) (EC 2.5.1.91) (Decaprenyl pyrophosphate synthase subunit 1) (Decaprenyl-diphosphate synthase subunit 1) (Solanesyl-diphosphate synthase subunit 1) (Trans-prenyltransferase 1) (TPT 1)	isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN008887	Chromosome_4A	1590	2	24	33.39622641509434	0.5437136669326342	91.9047619047619	23	1	95.59412550066756	15	1	88.07212205270457	8	1	52.13592233009709	13	0.6153846153846154	methylated (>=50%)	O75884	Serine hydrolase RBBP9 (EC 3.1.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 10) (RBBP-10) (Retinoblastoma-binding protein 9) (RBBP-9)	xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN008888	Chromosome_4A	19412	7	189	36.492890995260666	0.293264974317409	39.42051509769094	184	0.41847826086956524	71.45390070921985	58	0.8793103448275862	28.717417061611375	126	0.20634920634920634	20.539152759948653	25	0.08	sparse (10-50%)	Q8MIB8	Homeobox protein TGIF2LX (TGF-beta-induced transcription factor 2-like protein) (TGFB-induced factor 2-like protein, X-linked) (TGIF-like on the X)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN008889	Chromosome_4A	4122	1	74	42.309558466763704	0.40231872588782275	91.88752424046541	74	1	91.88752424046541	74	1	NA	NA	NA	88.79227053140097	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008890	Chromosome_4A	369	1	9	44.71544715447155	0.4879518072289157	93.1159420289855	9	1	93.1159420289855	9	1	NA	NA	NA	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008891	Chromosome_4A	408	1	1	48.28431372549019	0.04415584415584416	92.3076923076923	1	1	92.3076923076923	1	1	NA	NA	NA	63.073639274279614	32	0.625	NA	NA	NA	NA	no Swiss-Prot hit
GN008892	Chromosome_4A	264	1	10	45.833333333333336	0.7296849087893864	74.08536585365853	10	0.8	74.08536585365853	10	0.8	NA	NA	NA	23.626373626373628	12	0.16666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008893	Chromosome_4A	2064	4	28	36.24031007751938	0.4192352612603463	87.40865654862282	28	0.9642857142857143	87.60045924225028	14	1	87.22466960352423	14	0.9285714285714286	74.40652818991099	22	0.9545454545454546	methylated (>=50%)	Q0IIF6	Fas apoptotic inhibitory molecule 1	negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902042]	hit with GO BP
GN008894	Chromosome_4A	1967	6	26	34.31621759023894	0.45117066887802815	81.95342820181112	26	1	76.03305785123968	6	1	83.77007607776838	20	1	5.702507729302645	41	0.04878048780487805	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008895	Chromosome_4A	606	1	1	42.244224422442244	0.041216078351356863	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008896	Chromosome_4A	423	1	1	42.08037825059102	0.058385093167701865	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008897	Chromosome_4A	1494	1	8	42.971887550200805	0.1271272974812798	0	5	0	0	5	0	NA	NA	NA	0	2	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008898	Chromosome_4A	7137	12	192	34.93064312736444	0.8824206705939628	0.6268685504870286	192	0	0.645682001614205	57	0	0.6209605880116589	135	0	0.5797101449275363	56	0	unmethylated (<10%)	Q8N0N3	Beta-1,3-glucan-binding protein (GBP)	carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]	hit with GO BP
GN008899	Chromosome_4A	3620	3	50	36.21546961325967	0.4248626825031689	0.6515580736543909	50	0	0.5286343612334802	21	0	0.7098121085594989	29	0	0.7099391480730223	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008900	Chromosome_4A	486	1	26	44.44444444444444	1.0848214285714286	0.1264222503160556	26	0	0.1264222503160556	26	0	NA	NA	NA	0.7367387033398821	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008901	Chromosome_4A	27488	18	778	36.59778812572759	0.8452707669780811	0.8532320308731307	699	0	0.6167129201356768	69	0	0.8788638262322472	630	0	2.0366598778004072	61	0	unmethylated (<10%)	Q6YHK3	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)	negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of wound healing [GO:0061045]	hit with GO BP
GN008902	Chromosome_4A	663	1	19	43.13725490196079	0.6161408657373441	0.4398826979472141	19	0	0.4398826979472141	19	0	NA	NA	NA	0.5729166666666666	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008903	Chromosome_4A	4404	7	132	38.98728428701181	0.7896225261813885	0.5288766659614977	130	0	0.7234726688102894	29	0	0.4593741027849555	101	0	0.5809347768682335	48	0	unmethylated (<10%)	Q6YHK3	CD109 antigen (150 kDa TGF-beta-1-binding protein) (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 7) (Platelet-specific Gov antigen) (p180) (r150) (CD antigen CD109)	negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of wound healing [GO:0061045]	hit with GO BP
GN008904	Chromosome_4A	8451	11	126	36.16140101763105	0.4565790934930921	0.6622516556291391	126	0	0.44554455445544555	48	0	0.7753941586973379	78	0	0.49297510475720974	55	0	unmethylated (<10%)	A8K2U0	Alpha-2-macroglobulin-like protein 1 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 9)	regulation of endopeptidase activity [GO:0052548]	hit with GO BP
GN008905	Chromosome_4A	18312	14	191	33.45893403232853	0.3742648657625621	73.43696324287187	186	0.8440860215053764	66.09907120743034	35	0.8	74.90212239851638	151	0.8543046357615894	25.52107457156091	34	0.29411764705882354	methylated (>=50%)	Q8BP00	IQ calmodulin-binding motif-containing protein 1	cilium assembly [GO:0060271]; cytosolic ciliogenesis [GO:0061824]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]	hit with GO BP
GN008906	Chromosome_4A	2421	4	50	37.67038413878563	0.5848532431453074	NA	0	NA	NA	NA	NA	NA	NA	NA	0.851063829787234	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008907	Chromosome_4A	420	1	10	55.476190476190474	0.3143242029636282	4	2	0	4	2	0	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008908	Chromosome_4A	231	1	10	52.81385281385281	0.6214689265536724	0.44052863436123346	10	0	0.44052863436123346	10	0	NA	NA	NA	2.147820593809223	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008909	Chromosome_4A	489	1	7	51.329243353783234	0.21833141982395712	0.3067484662576687	7	0	0.3067484662576687	7	0	NA	NA	NA	0.8949416342412452	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008910	Chromosome_4A	192	1	14	54.6875	1.068362480127186	0.6944444444444444	14	0	0.6944444444444444	14	0	NA	NA	NA	0.9143407122232916	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008911	Chromosome_4A	398	2	5	34.17085427135678	0.491600790513834	0	5	0	0	4	0	0	1	0	0.8339952343129468	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008912	Chromosome_4A	1416	1	44	38.983050847457626	0.8241269841269842	0.5639097744360902	44	0	0.5639097744360902	44	0	NA	NA	NA	0.7736943907156673	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015587	Chromosome_4A	372	1	17	47.58064516129032	0.8443257676902537	0.6289308176100629	13	0	0.6289308176100629	13	0	NA	NA	NA	0.5440158259149357	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008913	Chromosome_4A	813	1	34	43.665436654366545	0.8785278413424866	0.7173601147776184	34	0	0.7173601147776184	34	0	NA	NA	NA	0.5533421868083223	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008914	Chromosome_4A	3348	1	47	39.69534050179212	0.35762727272727274	0.38852361028093246	47	0	0.38852361028093246	47	0	NA	NA	NA	0.554016620498615	31	0	unmethylated (<10%)	Q59RQ0	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	double-strand break repair via break-induced replication [GO:0000727]; negative regulation of telomere maintenance via telomerase [GO:0032211]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]; telomere maintenance via recombination [GO:0000722]; translesion synthesis [GO:0019985]	hit with GO BP
GN008915	Chromosome_4A	25090	22	375	35.88680749302511	0.46469232293463	82.03558530784815	375	0.9333333333333333	95.45304777594728	63	1	79.96543134563571	312	0.9198717948717948	0.6509078451524495	35	0	methylated (>=50%)	P17427	AP-2 complex subunit alpha-2 (100 kDa coated vesicle protein C) (Adaptor protein complex AP-2 subunit alpha-2) (Adaptor-related protein complex 2 subunit alpha-2) (Alpha-adaptin C) (Alpha2-adaptin) (Clathrin assembly protein complex 2 alpha-C large chain) (Plasma membrane adaptor HA2/AP2 adaptin alpha C subunit)	clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; postsynaptic neurotransmitter receptor internalization [GO:0098884]; regulation of hematopoietic stem cell differentiation [GO:1902036]; synaptic vesicle endocytosis [GO:0048488]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN008916	Chromosome_4A	23693	38	355	36.06972523530157	0.4618423925974006	69.06942241776231	330	0.796969696969697	73.37302124205114	143	0.8391608391608392	66.45278051990786	187	0.7647058823529411	2.720348204570185	45	0.022222222222222223	methylated (>=50%)	M0R2J8	Doublecortin domain-containing protein 1 (Doublecortin domain-containing 5 protein)	intracellular signal transduction [GO:0035556]; regulation of mitotic cytokinesis [GO:1902412]	hit with GO BP
GN008917	Chromosome_4A	10612	6	181	36.17602713908782	0.5222100180525046	75.55575158786168	177	0.8248587570621468	76.65024630541872	20	0.8	75.44811549268482	157	0.8280254777070064	48.33745534487497	67	0.4925373134328358	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008918	Chromosome_4A	31829	12	691	36.63954255553112	0.6470460018536589	82.53919771940542	567	0.9118165784832452	81.41660319878142	22	0.9090909090909091	82.59155329804994	545	0.9119266055045872	46.620237607537895	39	0.46153846153846156	methylated (>=50%)	Q9UKZ1	CCR4-NOT transcription complex subunit 11	nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]	hit with GO BP
GN008919	Chromosome_4A	17613	14	383	35.72361324022029	0.6818414202819799	87.57757252128734	375	0.9013333333333333	74.30240103828683	78	0.6923076923076923	89.23845092149062	297	0.9562289562289562	0.4172461752433936	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008920	Chromosome_4A	39991	23	518	32.95991598109575	0.4791997173750934	65.7263179258207	464	0.8125	93.73595505617978	66	0.9848484848484849	62.94550727871047	398	0.7839195979899497	97.24137931034483	3	1	methylated (>=50%)	Q9Z0W3	Nuclear pore complex protein Nup160 (160 kDa nucleoporin) (Gene trap locus 1-13 protein) (GTL-13) (Nucleoporin Nup160)	mRNA export from nucleus [GO:0006406]; nephron development [GO:0072006]; nucleocytoplasmic transport [GO:0006913]	hit with GO BP
GN008921	Chromosome_4A	3273	4	116	36.999694469905286	1.0371232360316653	0.435334663522583	116	0	0.44077134986225897	43	0	0.43266630611141155	73	0	0.9259259259259259	38	0	unmethylated (<10%)	O75973	C1q-related factor (C1q and tumor necrosis factor-related protein 14) (C1q/TNF-related protein 14) (Complement component 1 Q subcomponent-like 1)	locomotory behavior [GO:0007626]; maintenance of synapse structure [GO:0099558]; regulation of synapse pruning [GO:1905806]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN008922	Chromosome_4A	456	1	20	40.78947368421053	1.054945054945055	0	19	0	0	19	0	NA	NA	NA	1.1204481792717087	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008923	Chromosome_4A	22625	12	507	34.07734806629834	0.7721765552364689	0.5761571478287769	388	0	0.3211745813259922	70	0	0.6278485722258395	318	0	1.4058106841611997	34	0	unmethylated (<10%)	O75973	C1q-related factor (C1q and tumor necrosis factor-related protein 14) (C1q/TNF-related protein 14) (Complement component 1 Q subcomponent-like 1)	locomotory behavior [GO:0007626]; maintenance of synapse structure [GO:0099558]; regulation of synapse pruning [GO:1905806]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN008924	Chromosome_4A	626	2	20	44.88817891373802	0.6346309813463098	0	5	0	0	2	0	0	3	0	0.48614487117160915	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008925	Chromosome_4A	5330	7	89	36.228893058161354	0.5100094611447985	83.08790718429273	89	0.9550561797752809	80.28985507246377	23	0.9565217391304348	83.92805337975051	66	0.9545454545454546	84.1309823677582	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008926	Chromosome_4A	23733	8	231	38.098849702945266	0.28066782104687027	81.3877736535111	229	0.9301310043668122	74.55068296189792	32	0.84375	82.1930567315834	197	0.9441624365482234	0.6060606060606061	22	0	methylated (>=50%)	Q8BM89	Arylsulfatase J (ASJ) (EC 3.1.6.-)	NA	hit, no GO BP
GN008927	Chromosome_4A	969	3	25	42.208462332301345	0.5802673181948836	1.6528925619834711	2	0	0	1	0	2.857142857142857	1	0	3.5616438356164384	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008928	Chromosome_4A	23285	15	610	37.079665020399396	0.7634215729499101	1.1494252873563218	587	0	0.293398533007335	52	0	1.2146503222921867	535	0	1.116751269035533	20	0	unmethylated (<10%)	P49282	Natural resistance-associated macrophage protein 2 (NRAMP 2) (Divalent cation transporter 1) (Divalent metal transporter 1) (DMT-1) (Solute carrier family 11 member 2)	cadmium ion transmembrane transport [GO:0070574]; cellular response to oxidative stress [GO:0034599]; cobalt ion transport [GO:0006824]; copper ion import across plasma membrane [GO:0098705]; copper ion transport [GO:0006825]; dendrite morphogenesis [GO:0048813]; erythrocyte development [GO:0048821]; heme biosynthetic process [GO:0006783]; intracellular iron ion homeostasis [GO:0006879]; intracellular manganese ion homeostasis [GO:0030026]; iron import into cell [GO:0033212]; iron ion transmembrane transport [GO:0034755]; iron ion transport [GO:0006826]; lead ion transport [GO:0015692]; learning or memory [GO:0007611]; manganese ion transport [GO:0006828]; multicellular organismal-level iron ion homeostasis [GO:0060586]; nickel cation transport [GO:0015675]; porphyrin-containing compound biosynthetic process [GO:0006779]; porphyrin-containing compound metabolic process [GO:0006778]; proton transmembrane transport [GO:1902600]; response to iron ion [GO:0010039]; response to manganese ion [GO:0010042]; transition metal ion transport [GO:0000041]; vanadium ion transport [GO:0015676]	hit with GO BP
GN008929	Chromosome_4A	966	1	43	44.3064182194617	0.9252049180327869	43.80412063302478	43	0.46511627906976744	43.80412063302478	43	0.46511627906976744	NA	NA	NA	2.632554690396737	50	0	sparse (10-50%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN008930	Chromosome_4A	1693	3	45	39.33845245126994	0.6961030654666728	14.41784548422198	45	0	25.88699080157687	12	0	6.3138347260909935	33	0	2.4429102496016992	46	0	sparse (10-50%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN008931	Chromosome_4A	23877	20	311	36.86392762909913	0.38453056337614633	60.90990889663705	308	0.7045454545454546	79.08872013335802	128	0.921875	52.98392958087701	180	0.55	30.84004602991945	18	0.16666666666666666	methylated (>=50%)	F1LTE0	Protein TANC2	dense core granule cytoskeletal transport [GO:0099519]; in utero embryonic development [GO:0001701]; regulation of dendritic spine development [GO:0060998]; regulation of dendritic spine morphogenesis [GO:0061001]	hit with GO BP
GN008932	Chromosome_4A	315	1	7	46.34920634920635	0.47934782608695653	94.15584415584415	7	1	94.15584415584415	7	1	NA	NA	NA	56.256358087487286	27	0.7037037037037037	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008933	Chromosome_4A	6009	8	78	36.661674155433516	0.3879373277381869	89.45065629557608	77	0.987012987012987	92.09809264305177	27	1	88.48323929638234	50	0.98	74.1167129813418	43	0.5348837209302325	methylated (>=50%)	Q6P3W7	SCY1-like protein 2 (Coated vesicle-associated kinase of 104 kDa)	brain development [GO:0007420]; clathrin-dependent endocytosis [GO:0072583]; endosome to lysosome transport [GO:0008333]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; pyramidal neuron development [GO:0021860]; receptor internalization [GO:0031623]	hit with GO BP
GN008934	Chromosome_4A	24965	17	352	34.856799519327055	0.4643433856663369	72.96346021263471	348	0.8448275862068966	76.51117858128623	61	0.819672131147541	72.42647058823529	287	0.8501742160278746	30.0148588410104	49	0.32653061224489793	methylated (>=50%)	Q4R9E0	Tectonic-3	cilium assembly [GO:0060271]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN008935	Chromosome_4A	7693	5	172	35.343819056284936	0.7183786483669214	77.09067309475246	163	0.8466257668711656	59.25537493445202	26	0.6153846153846154	80.92127491834665	137	0.8905109489051095	1.4063873425139173	55	0	methylated (>=50%)	Q78WZ7	DNA-directed RNA polymerase I subunit RPA43 (DNA-directed RNA polymerase I subunit F) (Twist neighbor protein)	cellular response to leukemia inhibitory factor [GO:1990830]; DNA-templated transcription initiation [GO:0006352]; transcription elongation by RNA polymerase I [GO:0006362]	hit with GO BP
GN008936	Chromosome_4A	5854	5	155	41.01469080970277	0.6431827042353359	2.8600787806131187	155	0	0.5555555555555556	64	0	4.042498056491319	91	0	0.7007007007007007	33	0	unmethylated (<10%)	A0A0E0RTV6	FAD-linked oxidoreductase ZEB1 (EC 1.-.-.-) (Zearalenone biosynthesis protein 1)	zearalenone biosynthetic process [GO:0106150]	hit with GO BP
GN008937	Chromosome_4A	40739	36	1117	35.61697636171727	0.8646024490847819	0.7614785845899297	1079	0	0.5461496450027308	204	0	0.8062501419454475	875	0	0.4784688995215311	49	0	unmethylated (<10%)	B3EWY9	Mucin-like protein	cell-matrix adhesion [GO:0007160]	hit with GO BP
GN008938	Chromosome_4A	1275	1	53	46.03921568627451	0.7899628252788105	NA	0	NA	NA	NA	NA	NA	NA	NA	76.51245551601423	37	0.7567567567567568	NA	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN008939	Chromosome_4A	18768	12	342	34.58013640238704	0.609664580075409	71.63537186614917	283	0.6784452296819788	68.95268474215843	42	0.7142857142857143	71.9290078556881	241	0.6721991701244814	0.48225973131243544	51	0	methylated (>=50%)	E1BYJ2	DNA mismatch repair protein Msh6	mismatch repair [GO:0006298]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of DNA endoreduplication [GO:0032876]; positive regulation of B cell proliferation [GO:0030890]	hit with GO BP
GN008940	Chromosome_4A	14482	9	129	36.40381162822815	0.26886092694645114	82.6944667201283	123	0.8861788617886179	90.66265060240964	23	1	81.17961443023478	100	0.86	85.62945368171022	22	0.9090909090909091	methylated (>=50%)	Q4QQW3	Hydroxyacid-oxoacid transhydrogenase, mitochondrial (HOT) (EC 1.1.99.24) (Alcohol dehydrogenase iron-containing protein 1) (ADHFe1)	ketone body catabolic process [GO:0046952]	hit with GO BP
GN008941	Chromosome_4A	12844	5	180	34.77109934599813	0.46365999229880633	84.83025708635465	178	0.9325842696629213	90.44890162368672	22	0.9545454545454546	84.29975651546577	156	0.9294871794871795	15.015974440894569	28	0.17857142857142858	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008942	Chromosome_4A	8078	6	136	35.92473384501114	0.5238198999571354	81.94330078814257	136	0.8970588235294118	70.32854209445586	19	0.7894736842105263	83.44626013019796	117	0.9145299145299145	25.22704339051463	34	0.29411764705882354	methylated (>=50%)	O01802	Large ribosomal subunit protein uL30 (60S ribosomal protein L7)	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	hit with GO BP
GN008943	Chromosome_4A	1338	1	19	40.95665171898356	0.33950320512820514	89.44246737841044	19	1	89.44246737841044	19	1	NA	NA	NA	18.9794945159752	34	0.20588235294117646	methylated (>=50%)	O08848	RNA-binding protein Ro60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2)	cellular response to interferon-alpha [GO:0035457]; cilium assembly [GO:0060271]; immune system development [GO:0002520]; regulation of gene expression [GO:0010468]; response to UV [GO:0009411]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN008944	Chromosome_4A	12177	6	158	32.75847909994251	0.4838099347750319	89.92511912865895	154	0.974025974025974	94.4927536231884	17	1	89.41392733564014	137	0.9708029197080292	59.78552278820376	12	0.75	methylated (>=50%)	Q9GZR5	Very long chain fatty acid elongase 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELOVL4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Elongation of very long chain fatty acids protein 4) (Very long chain 3-ketoacyl-CoA synthase 4) (Very long chain 3-oxoacyl-CoA synthase 4)	circadian rhythm [GO:0007623]; fatty acid biosynthetic process [GO:0006633]; fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty-acyl-CoA biosynthetic process [GO:0035338]; negative regulation of mini excitatory postsynaptic potential [GO:0061886]; positive regulation of inhibitory postsynaptic potential [GO:0097151]; short-term synaptic potentiation [GO:1990926]; sphingolipid biosynthetic process [GO:0030148]; unsaturated fatty acid biosynthetic process [GO:0006636]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN008945	Chromosome_4A	4701	7	59	35.41799617102744	0.40057278533114965	84.9090909090909	59	0.9661016949152542	80	16	0.875	86.79245283018868	43	1	81.61683277962348	16	1	methylated (>=50%)	Q9EQC4	Very long chain fatty acid elongase 4 (EC 2.3.1.199) (3-keto acyl-CoA synthase Elovl4) (ELOVL fatty acid elongase 4) (ELOVL FA elongase 4) (Elongation of very long chain fatty acids protein 4) (Very long chain 3-ketoacyl-CoA synthase 4) (Very long chain 3-oxoacyl-CoA synthase 4)	circadian rhythm [GO:0007623]; fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty-acyl-CoA biosynthetic process [GO:0035338]; negative regulation of mini excitatory postsynaptic potential [GO:0061886]; positive regulation of inhibitory postsynaptic potential [GO:0097151]; short-term synaptic potentiation [GO:1990926]; sphingolipid biosynthetic process [GO:0030148]; unsaturated fatty acid biosynthetic process [GO:0006636]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN008946	Chromosome_4A	1395	6	46	37.634408602150536	0.9322427869947991	0.5179282868525896	46	0	0.5254860746190226	35	0	0.4942339373970346	11	0	0.6315007429420505	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008947	Chromosome_4A	534	1	19	38.57677902621723	0.9578023222883036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008948	Chromosome_4A	1071	3	34	40.98972922502334	0.7558221594918842	0.5444646098003629	24	0	0.5444646098003629	24	0	NA	NA	NA	2.8593508500772797	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008949	Chromosome_4A	765	2	15	35.55555555555556	0.6209415584415584	0.12594458438287154	15	0	0.32786885245901637	9	0	0	6	0	0.7451991974777873	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008950	Chromosome_4A	1268	3	31	36.35646687697161	0.7476130701053673	0.5220883534136547	31	0	0.30637254901960786	20	0	0.9324009324009324	11	0	0.45030556449018977	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008951	Chromosome_4A	387	1	10	38.75968992248062	0.6899625601711535	0.69713400464756	10	0	0.69713400464756	10	0	NA	NA	NA	0.2803738317757009	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016128	Chromosome_4A	260	2	2	38.46153846153846	0.21215830273357814	0	2	0	0	2	0	NA	NA	NA	0.27603513174404015	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008952	Chromosome_4A	1377	3	22	35.22149600580973	0.5185020367644542	0.825643516270034	22	0	1.2432012432012431	13	0	0.12953367875647667	9	0	0.7031488841332926	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016130	Chromosome_4A	786	2	25	40.5852417302799	0.7818095010742421	0.2664890073284477	25	0	0.2766251728907331	24	0	0	1	0	0.6301991429291656	41	0	unmethylated (<10%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN016125	Chromosome_4A	162	1	6	49.382716049382715	0.6923076923076923	0.7092198581560284	5	0	0.7092198581560284	5	0	NA	NA	NA	0.6772673733804476	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017758	Chromosome_4A	340	1	1	38.529411764705884	0.07981220657276995	0	1	0	0	1	0	NA	NA	NA	1.6153846153846154	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008953	Chromosome_4A	639	1	26	41.47104851330204	0.9502402196293754	0.5929363237947924	23	0	0.5929363237947924	23	0	NA	NA	NA	1.0377358490566038	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008954	Chromosome_4A	399	1	11	40.100250626566414	0.806949806949807	0.5340453938584779	11	0	0.5340453938584779	11	0	NA	NA	NA	1.1111111111111112	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008955	Chromosome_4A	3438	1	257	43.251890634089584	1.5986878530511217	0.4982561036372696	104	0	0.4982561036372696	104	0	NA	NA	NA	4.322084073416223	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008956	Chromosome_4A	558	1	17	37.81362007168459	0.8522911051212938	0.774526678141136	17	0	0.774526678141136	17	0	NA	NA	NA	0.6092916984006093	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008957	Chromosome_4A	9149	8	222	34.29883047327577	0.8253525900081313	1.11787072243346	221	0	0.5931198102016607	32	0	1.1950453593859036	189	0	0.45056983832494035	58	0	unmethylated (<10%)	Q6UX65	DNA damage-regulated autophagy modulator protein 2 (Transmembrane protein 77)	photoreceptor cell maintenance [GO:0045494]; regulation of autophagy [GO:0010506]; visual perception [GO:0007601]	hit with GO BP
GN008958	Chromosome_4A	1466	2	42	42.63301500682128	0.6305118069920331	0.5244755244755245	39	0	1.3774104683195592	19	0	0.12804097311139565	20	0	4.016913319238901	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008959	Chromosome_4A	210	1	13	54.76190476190476	0.8272727272727273	1.2302284710017575	13	0	1.2302284710017575	13	0	NA	NA	NA	0.5034324942791762	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008960	Chromosome_4A	2347	4	53	37.23902854708138	0.6614677777009673	3.214695752009185	53	0	4.513064133016627	22	0	2.800908402725208	31	0	1.756007393715342	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008961	Chromosome_4A	549	1	16	46.26593806921676	0.5495151704723178	0	2	0	0	2	0	NA	NA	NA	4.8169556840077075	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008962	Chromosome_4A	2583	3	68	36.043360433604335	0.8117236024844721	0.51440329218107	68	0	0.21231422505307856	18	0	0.6109979633401222	50	0	0.481637567730283	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008963	Chromosome_4A	681	1	25	43.906020558002936	0.7679989173583543	1.4634146341463414	15	0	1.4634146341463414	15	0	NA	NA	NA	0.5524861878453039	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008964	Chromosome_4A	528	1	23	40.90909090909091	1.0425824175824177	0.6472491909385113	19	0	0.6472491909385113	19	0	NA	NA	NA	1.1627906976744187	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008965	Chromosome_4A	1308	1	56	42.813455657492355	0.9350490196078431	0.5196733481811433	56	0	0.5196733481811433	56	0	NA	NA	NA	0.5856011023079573	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008966	Chromosome_4A	339	1	14	36.87315634218289	1.237871674491393	0.6533278889342589	14	0	0.6533278889342589	14	0	NA	NA	NA	0.5020395356134295	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008967	Chromosome_4A	603	1	38	53.565505804311776	0.8789413118527043	0.6396588486140725	31	0	0.6396588486140725	31	0	NA	NA	NA	1.3850415512465375	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016480	Chromosome_4A	465	1	7	39.354838709677416	0.3901941980340446	1.0101010101010102	7	0	1.0101010101010102	7	0	NA	NA	NA	0.3463203463203463	29	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN003338	Chromosome_4A	497	1	17	49.496981891348085	0.5621797857475547	0	7	0	0	7	0	NA	NA	NA	0.3389830508474576	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008968	Chromosome_4A	495	1	19	43.23232323232323	0.8221153846153846	0.2247191011235955	19	0	0.2247191011235955	19	0	NA	NA	NA	0.6155740227762388	61	0	unmethylated (<10%)	P09479	Acetylcholine receptor subunit alpha	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN008969	Chromosome_4A	1933	3	72	39.26539058458355	0.9667416854213553	0.5660377358490566	72	0	0.6369426751592356	25	0	0.5361930294906166	47	0	0.23592854735422986	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008970	Chromosome_4A	16792	10	190	34.611719866603146	0.3780034162102577	83.56600768293825	169	0.8994082840236687	69.86986986986987	21	0.6666666666666666	84.98035972710358	148	0.9324324324324325	0.5427408412483039	34	0	methylated (>=50%)	Q53GQ0	Very-long-chain 3-oxoacyl-CoA reductase (EC 1.1.1.330) (17-beta-hydroxysteroid dehydrogenase 12) (17-beta-HSD 12) (3-ketoacyl-CoA reductase) (KAR) (Estradiol 17-beta-dehydrogenase 12) (EC 1.1.1.62) (Short chain dehydrogenase/reductase family 12C member 1)	androgen biosynthetic process [GO:0006702]; estrogen biosynthetic process [GO:0006703]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty-acyl-CoA biosynthetic process [GO:0035338]	hit with GO BP
GN008971	Chromosome_4A	288	1	8	45.138888888888886	0.555984555984556	7.291666666666667	8	0	7.291666666666667	8	0	NA	NA	NA	1.0897768552153606	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008972	Chromosome_4A	876	1	16	40.06849315068493	0.47934336525307797	1.1288805268109126	16	0	1.1288805268109126	16	0	NA	NA	NA	0.9205983889528193	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008973	Chromosome_4A	14410	5	212	35.29493407356003	0.47892967779965634	85.80323785803238	212	0.9905660377358491	85.83992963940193	35	1	85.79638752052546	177	0.9887005649717514	89.23666560204407	37	0.8918918918918919	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008974	Chromosome_4A	1804	2	35	39.467849223946786	0.5017642010235545	89.61447678992918	35	0.9714285714285714	89.61447678992918	35	0.9714285714285714	NA	NA	NA	0.4997620180866254	61	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008975	Chromosome_4A	1116	2	44	45.60931899641577	0.7617274758004468	6.183368869936034	39	0.02564102564102564	0.8064516129032258	24	0	26.804123711340207	15	0.06666666666666667	2.6828212894850716	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008976	Chromosome_4A	363	1	24	46.28099173553719	1.236270753512133	1.1627906976744187	24	0	1.1627906976744187	24	0	NA	NA	NA	0.916310323762981	31	0	unmethylated (<10%)	P49894	Type I iodothyronine deiodinase (EC 1.21.99.3) (EC 1.21.99.4) (5DI) (DIOI) (Type 1 DI) (Type-I 5'-deiodinase)	amino acid metabolic process [GO:0006520]; thyroid hormone catabolic process [GO:0042404]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN008977	Chromosome_4A	5567	4	105	38.009700017963	0.523944487618351	91.84792219274978	104	0.9807692307692307	94.41048034934498	43	1	90.10401188707282	61	0.9672131147540983	90.68100358422939	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008978	Chromosome_4A	513	1	11	44.2495126705653	0.4453125	92.3076923076923	11	1	92.3076923076923	11	1	NA	NA	NA	93.265465935787	30	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008979	Chromosome_4A	351	1	14	44.15954415954416	0.8621052631578947	0.36363636363636365	14	0	0.36363636363636365	14	0	NA	NA	NA	3.0170049369171696	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008980	Chromosome_4A	2061	2	46	35.56525958272683	0.7059690822982754	0.5494505494505495	35	0	0.5681818181818182	8	0	0.5458515283842795	27	0	0.4798464491362764	51	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN008981	Chromosome_4A	195	1	7	47.17948717948718	0.65625	0.5208333333333334	7	0	0.5208333333333334	7	0	NA	NA	NA	0.6280843427545985	53	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN008982	Chromosome_4A	41877	27	737	35.30816438617857	0.5648040385658176	40.286200266232804	565	0.4814159292035398	82.76165347405453	54	0.9074074074074074	36.38675817521195	511	0.436399217221135	0.2789400278940028	15	0	sparse (10-50%)	Q8BLA8	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Wasabi receptor)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cellular response to caffeine [GO:0071313]; cellular response to carbon dioxide [GO:0071244]; cellular response to cold [GO:0070417]; cellular response to food [GO:0071240]; cellular response to heat [GO:0034605]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; intracellular calcium ion homeostasis [GO:0006874]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of monoatomic anion transport [GO:1903793]; protein homotetramerization [GO:0051289]; regulation of blood circulation [GO:1903522]; regulation of neuronal action potential [GO:0098908]; response to cold [GO:0009409]; response to hydrogen peroxide [GO:0042542]; response to pain [GO:0048265]; response to xenobiotic stimulus [GO:0009410]; sensory perception of pain [GO:0019233]; thermoception [GO:0050955]; ureteric peristalsis [GO:0072105]; urinary bladder smooth muscle contraction [GO:0014832]; vasodilation [GO:0042311]	hit with GO BP
GN008983	Chromosome_4A	4923	7	69	34.91773308957953	0.46593867535025607	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008984	Chromosome_4A	342	1	21	49.12280701754386	1.024975024975025	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN008985	Chromosome_4A	46813	5	780	34.763847649157285	0.5525350903984738	72.89855072463769	762	0.847769028871391	86.49155722326454	26	0.9615384615384616	72.5221246601202	736	0.84375	95.72307692307692	49	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008986	Chromosome_4A	969	1	10	41.38286893704851	0.24122479462285287	83.53413654618474	8	1	83.53413654618474	8	1	NA	NA	NA	74.04255319148936	9	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008987	Chromosome_4A	19254	14	520	36.59499324815623	0.8066867772750126	29.33496674833742	507	0.1755424063116371	40.448318804483186	80	0.225	27.51781714518428	427	0.16627634660421545	14.28	42	0	sparse (10-50%)	Q8HYL8	Peroxisomal acyl-coenzyme A oxidase 1 (AOX) (EC 1.3.3.6) (Palmitoyl-CoA oxidase) (Peroxisomal fatty acyl-CoA oxidase) (Straight-chain acyl-CoA oxidase)	fatty acid catabolic process [GO:0009062]; fatty acid oxidation [GO:0019395]; generation of precursor metabolites and energy [GO:0006091]; hydrogen peroxide biosynthetic process [GO:0050665]; lipid homeostasis [GO:0055088]; lipid metabolic process [GO:0006629]; prostaglandin metabolic process [GO:0006693]; very long-chain fatty acid beta-oxidation [GO:0140493]	hit with GO BP
GN008988	Chromosome_4A	11360	7	152	34.066901408450704	0.4614769925635903	84.27796375389588	148	0.9662162162162162	46.31578947368421	10	0.6	87.43435858964742	138	0.9927536231884058	59.478842935692086	52	0.5769230769230769	methylated (>=50%)	Q0V9A9	Endoribonuclease LACTB2 (Beta-lactamase-like protein 2) (EC 3.1.27.-)	NA	hit, no GO BP
GN008989	Chromosome_4A	1226	2	6	36.541598694942905	0.1484531089180844	NA	0	NA	NA	NA	NA	NA	NA	NA	40.50632911392405	6	0.5	NA	NA	NA	NA	no Swiss-Prot hit
GN008990	Chromosome_4A	4695	8	122	33.22683706070288	0.9435926666018705	0.5	121	0	0.4331348132106118	31	0	0.5230711750420325	90	0	0.8488964346349746	50	0	unmethylated (<10%)	Q6YP21	Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7) (Cysteine-S-conjugate beta-lyase 2) (EC 4.4.1.13) (Kynurenine aminotransferase 3) (Kynurenine aminotransferase III) (KATIII) (Kynurenine--glyoxylate transaminase) (EC 2.6.1.63) (Kynurenine--oxoglutarate transaminase III)	NA	hit, no GO BP
GN008991	Chromosome_4A	1763	4	27	34.82699943278502	0.5059630102040816	90.45936395759718	16	1	89.22716627634661	10	1	94.24460431654676	6	1	95.99524187153052	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN008992	Chromosome_4A	1245	1	32	39.83935742971887	0.6484375	38.58079904591533	32	0.53125	38.58079904591533	32	0.53125	NA	NA	NA	0.7941176470588235	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008993	Chromosome_4A	414	1	12	42.51207729468599	0.6428571428571429	0.16286644951140064	12	0	0.16286644951140064	12	0	NA	NA	NA	3.9813289401427787	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013000	Chromosome_4A	390	1	9	42.05128205128205	0.5232558139534884	1.0600706713780919	9	0	1.0600706713780919	9	0	NA	NA	NA	1.4632405424696646	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008994	Chromosome_4A	918	1	21	46.187363834422655	0.42901969511516636	2.7906976744186047	21	0	2.7906976744186047	21	0	NA	NA	NA	1.0188087774294672	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008995	Chromosome_4A	330	1	9	43.333333333333336	0.6024340770791075	0.9560229445506692	9	0	0.9560229445506692	9	0	NA	NA	NA	0.38022813688212925	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN008996	Chromosome_4A	594	1	4	38.215488215488215	0.18473021303063286	0	4	0	0	4	0	NA	NA	NA	0.8088235294117647	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN008997	Chromosome_4A	1014	1	26	44.57593688362919	0.5178855560139077	2.004008016032064	26	0	2.004008016032064	26	0	NA	NA	NA	0.6979695431472082	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013127	Chromosome_4A	563	2	11	45.11545293072824	0.40665834920218	23.863636363636363	5	0.2	23.863636363636363	5	0.2	NA	NA	NA	2.4027959807776322	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN008998	Chromosome_4A	12711	6	309	35.71709542915585	0.7623232455565745	0.7744087686900578	309	0	1.1727078891257996	38	0	0.7242974984910469	271	0	7.380952380952381	36	0	unmethylated (<10%)	P97872	Flavin-containing monooxygenase 5 (FMO 5) (Dimethylaniline monooxygenase [N-oxide-forming] 5) (EC 1.14.13.8) (Dimethylaniline oxidase 5) (Hepatic flavin-containing monooxygenase 5) (NADPH oxidase) (EC 1.6.3.1)	regulation of cholesterol metabolic process [GO:0090181]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN008999	Chromosome_4A	3322	4	102	36.604455147501504	0.9185751463890696	1.1774426771328237	102	0	0.6329113924050633	19	0	1.3100436681222707	83	0	0.5849753694581281	72	0	unmethylated (<10%)	Q71UH5	Calmodulin (CaM)	NA	hit, no GO BP
GN009000	Chromosome_4A	438	1	0	31.735159817351597	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4470426409903714	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009001	Chromosome_4A	2067	1	67	49.10498306724722	0.5389599775837108	0.2702702702702703	26	0	0.2702702702702703	26	0	NA	NA	NA	0.6126616746085772	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009002	Chromosome_4A	2051	2	59	38.6153096050707	0.7717853703337564	0.18876828692779613	59	0	0	15	0	0.22948938611589215	44	0	0.4153207198892478	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009003	Chromosome_4A	210	1	14	59.04761904761905	0.765625	0.851063829787234	14	0	0.851063829787234	14	0	NA	NA	NA	0.501432664756447	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009004	Chromosome_4A	10769	4	220	34.859318413966015	0.672541089592756	78.40859409156205	217	0.9493087557603687	93.51032448377582	10	1	77.74082045261854	207	0.9468599033816425	95.2228278294325	42	1	methylated (>=50%)	P83916	Chromobox protein homolog 1 (HP1Hsbeta) (Heterochromatin protein 1 homolog beta) (HP1 beta) (Heterochromatin protein p25) (M31) (Modifier 1 protein) (p25beta)	DNA damage response [GO:0006974]; heterochromatin formation [GO:0031507]	hit with GO BP
GN009005	Chromosome_4A	375	1	15	50.4	0.6320224719101124	0.21551724137931033	15	0	0.21551724137931033	15	0	NA	NA	NA	0.9049773755656109	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009006	Chromosome_4A	636	1	13	43.081761006289305	0.4474025974025974	1.6556291390728477	13	0	1.6556291390728477	13	0	NA	NA	NA	0.4301916308173641	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009007	Chromosome_4A	8213	3	316	47.98490198465847	0.67191326797433	2.1223653395784545	166	0.024096385542168676	0.5387484459179445	62	0	2.9871011541072643	104	0.038461538461538464	0.8676182479708928	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009008	Chromosome_4A	4053	3	125	40.14310387367382	0.7663595933926303	1.391762271957871	125	0	1.0023866348448687	59	0	1.6449410304158907	66	0	0.7388252678241596	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009009	Chromosome_4A	43882	14	449	33.904562235085	0.35681588250277235	73.44999298639361	444	0.8716216216216216	82.07945900253593	44	0.9318181818181818	72.66921606118547	400	0.865	29.82359426681367	60	0.25	methylated (>=50%)	O43028	Vacuolar protein 8	autophagosome assembly [GO:0000045]; nucleus-vacuole junction assembly [GO:0071562]; vacuole fusion, non-autophagic [GO:0042144]	hit with GO BP
GN009010	Chromosome_4A	970	2	36	41.54639175257732	0.8699551569506726	0.337609723160027	36	0	0.353045013239188	31	0	0.28735632183908044	5	0	2.552286423254165	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009011	Chromosome_4A	2340	1	91	42.69230769230769	0.8566600957476768	0.5363984674329502	91	0	0.5363984674329502	91	0	NA	NA	NA	0.5660377358490566	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009012	Chromosome_4A	11503	5	164	35.88629053290446	0.4444849701476361	48.438818565400844	163	0.5337423312883436	90.30668127053669	54	1	36.62080692533622	109	0.30275229357798167	24.92522432701894	15	0.06666666666666667	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009013	Chromosome_4A	17136	9	352	38.124416433239965	0.5695096995262734	88.67195308855867	295	0.9661016949152542	91.43297380585516	51	1	87.9102193504506	244	0.9590163934426229	80.63982349696636	26	0.8076923076923077	methylated (>=50%)	O94782	Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.4.19.12) (Deubiquitinating enzyme 1) (hUBP) (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) [Cleaved into: Ubiquitin carboxyl-terminal hydrolase 1, N-terminal fragment]	monoubiquitinated protein deubiquitination [GO:0035520]; positive regulation of error-prone translesion synthesis [GO:1904333]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; protein deubiquitination [GO:0016579]; regulation of DNA repair [GO:0006282]; response to UV [GO:0009411]	hit with GO BP
GN009014	Chromosome_4A	9616	7	155	36.67845257903494	0.48101878596393843	77.44539411206078	155	0.8580645161290322	76.41843971631205	42	0.8809523809523809	77.70350564468211	113	0.8495575221238938	37.66519823788546	41	0.4146341463414634	methylated (>=50%)	Q5R9X9	SH3 domain-binding protein 5-like (SH3BP-5-like)	intracellular signal transduction [GO:0035556]	hit with GO BP
GN009015	Chromosome_4A	777	1	4	40.7979407979408	0.1238148354712772	85.48387096774194	4	1	85.48387096774194	4	1	NA	NA	NA	72.84427284427285	22	0.9545454545454546	NA	NA	NA	NA	no Swiss-Prot hit
GN009016	Chromosome_4A	30352	23	481	36.84106483921982	0.4680051925379146	81.19355409952188	473	0.9534883720930233	87.7258080265599	211	0.985781990521327	77.4758252750917	262	0.9274809160305344	50.46040515653775	20	0.6	methylated (>=50%)	Q69ZU6	Thrombospondin type-1 domain-containing protein 7A [Cleaved into: Thrombospondin type-1 domain-containing protein 7A, soluble form]	actin cytoskeleton organization [GO:0030036]	hit with GO BP
GN009017	Chromosome_4A	15419	7	399	36.143718788507684	0.7923481664994954	0.8502125531382846	390	0	0.7515657620041754	100	0	0.8636363636363636	290	0	0.7452574525745257	72	0	unmethylated (<10%)	P52168	GATA-binding factor A (Protein pannier) (Transcription factor GATA-A) (dGATA-A)	blastoderm segmentation [GO:0007350]; cardioblast cell fate determination [GO:0007510]; cardioblast differentiation [GO:0010002]; cardiocyte differentiation [GO:0035051]; cell fate commitment [GO:0045165]; chaeta development [GO:0022416]; embryonic heart tube development [GO:0035050]; heart contraction [GO:0060047]; imaginal disc fusion, thorax closure [GO:0046529]; lymph gland development [GO:0048542]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pericardial nephrocyte differentiation [GO:0061320]; pigment metabolic process [GO:0042440]; positive regulation of antibacterial peptide biosynthetic process [GO:0006963]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN009018	Chromosome_4A	686	2	20	36.29737609329446	0.8927641853201458	0.2926829268292683	20	0	0.11428571428571428	18	0	1.3333333333333333	2	0	0.5244182235332678	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009019	Chromosome_4A	1836	3	56	39.869281045751634	0.7679024885728797	75.83425009167584	56	0.7142857142857143	74.03718459495352	36	0.6388888888888888	78.05077805077805	20	0.85	0.6077348066298343	73	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009020	Chromosome_4A	15774	6	229	38.86775706859389	0.43219489082797014	23.624538583230795	217	0.22580645161290322	59.07692307692308	17	0.5294117647058824	21.476510067114095	200	0.2	0.995850622406639	69	0	sparse (10-50%)	Q9NVV5	Androgen-induced gene 1 protein (AIG-1) (Fatty acid esters of hydroxy fatty acids hydrolase AIG1) (FAHFA hydrolase AIG1) (EC 3.1.-.-)	long-chain fatty acid catabolic process [GO:0042758]	hit with GO BP
GN009021	Chromosome_4A	47422	44	521	35.32959385939016	0.354863500597822	78.8147273085253	519	0.9402697495183044	88.42625264643613	88	0.9886363636363636	77.50942431793496	431	0.9303944315545244	89.70588235294117	30	1	methylated (>=50%)	Q9Y2I7	1-phosphatidylinositol 3-phosphate 5-kinase (Phosphatidylinositol 3-phosphate 5-kinase) (EC 2.7.1.150) (FYVE finger-containing phosphoinositide kinase) (PIKfyve) (Phosphatidylinositol 3-phosphate 5-kinase type III) (PIPkin-III) (Type III PIP kinase) (Serine-protein kinase PIKFYVE) (EC 2.7.11.1)	1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process [GO:1903100]; antigen processing and presentation of exogenous peptide antigen via MHC class II [GO:0019886]; intracellular signal transduction [GO:0035556]; melanosome organization [GO:0032438]; neutrophil chemotaxis [GO:0030593]; peptidyl-serine autophosphorylation [GO:0036289]; phagosome maturation [GO:0090382]; phagosome-lysosome fusion [GO:0090385]; phosphatidylinositol 5-phosphate metabolic process [GO:1904562]; phosphatidylinositol biosynthetic process [GO:0006661]; positive regulation of cGAS/STING signaling pathway [GO:0141111]; protein localization to nucleus [GO:0034504]; protein targeting to membrane [GO:0006612]; receptor-mediated endocytosis of virus by host cell [GO:0019065]; regulation of autophagosome assembly [GO:2000785]; regulation of reactive oxygen species biosynthetic process [GO:1903426]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN009022	Chromosome_4A	18729	12	270	34.07015857760692	0.4985913359916563	64.07694848084545	185	0.6648648648648648	37.18381112984823	24	0.3333333333333333	66.9961559582647	161	0.7142857142857143	1.2797074954296161	51	0	methylated (>=50%)	Q28HU3	Centromere protein O (CENP-O)	kinetochore assembly [GO:0051382]	hit with GO BP
GN009023	Chromosome_4A	1002	1	39	41.71656686626746	0.8998963730569948	0.5925925925925926	39	0	0.5925925925925926	39	0	NA	NA	NA	1.10803324099723	34	0	unmethylated (<10%)	Q24157	Beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase brn (EC 2.4.1.-) (Glycolipid-specific beta-1,3-N-Acetylglucosaminyltransferase brn) (Neurogenic secreted-signaling protein brn) (Protein brainiac) (UDP-GlcNAc:beta-Man/beta-Gal beta-1,3GlcNAc transferase) (beta3GlcNAc-transferase)	arthro-series glucosylceramide biosynthetic process [GO:0140269]; border follicle cell migration [GO:0007298]; follicle cell of egg chamber development [GO:0030707]; follicle cell of egg chamber-cell adhesion [GO:0007299]; germarium-derived egg chamber formation [GO:0007293]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; insect visual primordium formation [GO:0001744]; maintenance of polarity of follicular epithelium [GO:0042248]; morphogenesis of follicular epithelium [GO:0016333]	hit with GO BP
GN009024	Chromosome_4A	756	1	17	38.75661375661376	0.5991608391608392	0.9615384615384616	17	0	0.9615384615384616	17	0	NA	NA	NA	2.549019607843137	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009025	Chromosome_4A	390	1	13	47.94871794871795	0.5963302752293578	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009026	Chromosome_4A	390	1	13	47.94871794871795	0.5963302752293578	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009027	Chromosome_4A	2262	6	77	38.06366047745358	0.939906103286385	0.37978381536663747	60	0	0.45325779036827196	38	0	0.30156815440289503	22	0	1.1075949367088607	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009028	Chromosome_4A	2954	7	91	36.899119837508465	0.9053902945059683	0	4	0	NA	NA	NA	0	4	0	4.929577464788732	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009029	Chromosome_4A	2252	6	77	38.36589698046181	0.9292868664891023	1.4705882352941178	4	0	NA	NA	NA	1.4705882352941178	4	0	10.606060606060606	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009030	Chromosome_4A	2954	7	91	36.899119837508465	0.9053902945059683	0	4	0	NA	NA	NA	0	4	0	2.1970705725699067	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009031	Chromosome_4A	2268	6	78	38.18342151675485	0.9436238818389848	0.4222972972972973	46	0	0.1404494382022472	30	0	0.847457627118644	16	0	0.8126410835214447	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009032	Chromosome_4A	2976	7	93	36.79435483870968	0.9237917222963952	0.5164319248826291	60	0	0.5882352941176471	40	0	0.425531914893617	20	0	0.4767580452920143	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009033	Chromosome_4A	2249	5	73	38.32814584259671	0.8838505103578965	0.5054151624548736	73	0	0.5191127890514393	46	0	0.4911591355599214	27	0	2.660989888238425	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009034	Chromosome_4A	1523	4	45	36.37557452396586	0.894374192538073	0.35949670461354105	37	0	0.39308176100628933	30	0	0.2518891687657431	7	0	0.2386634844868735	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009035	Chromosome_4A	552	2	20	39.85507246376812	0.9172482552342971	0.37037037037037035	9	0	0	5	0	0.6711409395973155	4	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009036	Chromosome_4A	3003	3	67	41.49184149184149	0.5766310811779035	0.9891512444160817	54	0	1.1070110701107012	22	0	0.9645061728395061	32	0	0.5181347150259067	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009037	Chromosome_4A	448	2	11	42.1875	0.5544554455445545	88.65671641791045	11	1	88.65671641791045	11	1	NA	NA	NA	4.07488986784141	29	0.034482758620689655	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009038	Chromosome_4A	18578	12	215	35.251372591236944	0.37370454262647695	86.56074630129	212	0.9528301886792453	89.31623931623932	26	0.9615384615384616	86.24665097020379	186	0.9516129032258065	83.8351822503962	32	0.9375	methylated (>=50%)	Q8N584	Tetratricopeptide repeat protein 39C (TPR repeat protein 39C)	cilium assembly [GO:0060271]; otolith morphogenesis [GO:0032474]	hit with GO BP
GN009039	Chromosome_4A	2350	2	15	37.4468085106383	0.18436288892724334	86.7132867132867	15	1	89.77272727272727	2	1	86.28389154704944	13	1	89.20086393088553	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009040	Chromosome_4A	2227	7	55	38.751683879658735	0.6578848426254162	NA	0	NA	NA	NA	NA	NA	NA	NA	14.827018121911038	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009041	Chromosome_4A	1714	4	26	34.830805134189035	0.5002581890842145	87.63683193818416	26	1	89.94845360824742	11	1	85.32818532818533	15	1	61.855670103092784	14	0.5	methylated (>=50%)	Q25074	Aquaporin (BfWC1) (Water channel 1)	chemical homeostasis [GO:0048878]	hit with GO BP
GN009042	Chromosome_4A	15321	4	414	38.90085503557209	0.7175547389269826	0.7276749330539062	352	0	0.24088093599449414	93	0	0.8267937219730942	259	0	1.1430990685859441	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009043	Chromosome_4A	4499	4	148	37.05267837297177	0.9585210734367308	0.5689206762028609	148	0	0.6213450292397661	85	0	0.5269320843091335	63	0	0.6628369421122404	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009044	Chromosome_4A	4474	3	170	38.846669646848454	1.0082988652030969	0.7005461885537877	170	0	0.5915215248110417	81	0	0.7622234616099647	89	0	0.2596559558584875	108	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009045	Chromosome_4A	54491	44	875	36.165605329320435	0.49328926815719687	85.76395554702331	704	0.9389204545454546	93.89788293897882	106	0.9811320754716981	84.65584100824043	598	0.931438127090301	0.467047223663726	32	0	methylated (>=50%)	Q14008	Cytoskeleton-associated protein 5 (Colonic and hepatic tumor overexpressed gene protein) (Ch-TOG)	centrosome cycle [GO:0007098]; centrosome duplication [GO:0051298]; chromosome segregation [GO:0007059]; establishment or maintenance of microtubule cytoskeleton polarity [GO:0030951]; microtubule depolymerization [GO:0007019]; microtubule polymerization [GO:0046785]; mitotic cell cycle [GO:0000278]; mitotic spindle organization [GO:0007052]; positive regulation of microtubule nucleation [GO:0090063]; RNA transport [GO:0050658]; spindle organization [GO:0007051]	hit with GO BP
GN009046	Chromosome_4A	2109	1	56	38.40682788051209	0.7214616892993934	76.11350574712644	56	0.6607142857142857	76.11350574712644	56	0.6607142857142857	NA	NA	NA	65.5345426476264	54	0.5740740740740741	methylated (>=50%)	Q62318	Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-A-interacting protein) (KRIP-1) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)	antiviral innate immune response [GO:0140374]; chromatin organization [GO:0006325]; convergent extension involved in axis elongation [GO:0060028]; DNA damage response [GO:0006974]; DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; DNA repair [GO:0006281]; embryo implantation [GO:0007566]; embryonic placenta morphogenesis [GO:0060669]; epigenetic programming of gene expression [GO:0043045]; epithelial to mesenchymal transition [GO:0001837]; genomic imprinting [GO:0071514]; in utero embryonic development [GO:0001701]; innate immune response [GO:0045087]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of single stranded viral RNA replication via double stranded DNA intermediate [GO:0045869]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of type I interferon production [GO:0032481]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; protein sumoylation [GO:0016925]; protein ubiquitination [GO:0016567]; suppression of viral release by host [GO:0044790]	hit with GO BP
GN009047	Chromosome_4A	216	1	6	41.2037037037037	0.7105263157894737	0.33112582781456956	6	0	0.33112582781456956	6	0	NA	NA	NA	0.9349289454001496	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009048	Chromosome_4A	1373	3	25	37.65477057538237	0.5259569121387637	1.5957446808510638	20	0	1.646542261251372	19	0	0	1	0	5.480710349050827	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009049	Chromosome_4A	2258	4	32	36.403897254207266	0.42866635026103467	7.459677419354839	30	0	5.278592375366569	17	0	9.305210918114144	13	0	22.386172006745362	45	0.15555555555555556	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009050	Chromosome_4A	2082	1	7	49.711815561959654	0.05445699937225361	NA	0	NA	NA	NA	NA	NA	NA	NA	1.8620689655172413	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009051	Chromosome_4A	168	1	9	38.69047619047619	1.5983086680761098	0.6376195536663124	9	0	0.6376195536663124	9	0	NA	NA	NA	0.8810572687224669	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009052	Chromosome_4A	381	1	2	37.00787401574803	0.15557370355247038	0	2	0	0	2	0	NA	NA	NA	0.39447731755424065	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009053	Chromosome_4A	3877	3	37	35.25922104720144	0.3075559157490309	0.17857142857142858	26	0	0.19120458891013384	24	0	0	2	0	0.7658643326039387	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009054	Chromosome_4A	1330	4	11	37.669172932330824	0.23471843414086316	0	2	0	0	2	0	NA	NA	NA	0.3448275862068966	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009055	Chromosome_4A	1255	2	24	36.57370517928287	0.5814671814671815	0.4889975550122249	24	0	0.4087193460490463	13	0	0.5543237250554324	11	0	0.6474396703943496	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009056	Chromosome_4A	3850	4	24	28.649350649350648	0.3042576311370147	0.6519377037305324	24	0	0.5611672278338945	9	0	0.6951871657754011	15	0	1.0367298578199051	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009057	Chromosome_4A	3072	2	16	33.756510416666664	0.18320474113832047	1.561439239646979	15	0	0	4	0	1.8414731785428342	11	0	0.5192107995846313	55	0	unmethylated (<10%)	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN009058	Chromosome_4A	606	1	13	42.9042904290429	0.47015994270709	0.7751937984496124	13	0	0.7751937984496124	13	0	NA	NA	NA	0.4520166898470097	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009059	Chromosome_4A	449	2	16	46.102449888641424	0.6719042274597831	0.3058103975535168	16	0	0.3058103975535168	16	0	NA	NA	NA	0.604351329572925	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011666	Chromosome_4A	211	2	4	42.18009478672986	0.4768361581920904	1.092896174863388	4	0	1.092896174863388	4	0	NA	NA	NA	1.9230769230769231	34	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009060	Chromosome_4A	528	1	10	54.166666666666664	0.2586586978886004	0	8	0	0	8	0	NA	NA	NA	0.7936507936507936	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001539	Chromosome_4A	2604	2	54	36.175115207373274	0.6351219512195122	1.800614844093105	54	0	0.34458993797381116	17	0	2.481469545601031	37	0	0.9460359760159893	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009061	Chromosome_4A	639	1	8	41.158059467918626	0.29831932773109243	0.9380863039399625	8	0	0.9380863039399625	8	0	NA	NA	NA	0.718132854578097	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009062	Chromosome_4A	261	1	12	45.21072796934866	0.9007765314926661	22.037735849056602	11	0	22.037735849056602	11	0	NA	NA	NA	4.970760233918129	65	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009063	Chromosome_4A	662	2	8	35.04531722054381	0.3959626168224299	8.016443987667008	8	0	10.169491525423728	3	0	7.079646017699115	5	0	3.1713267029461436	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009064	Chromosome_4A	1048	2	10	39.217557251908396	0.24869482676791646	0	10	0	0	10	0	NA	NA	NA	1.0784313725490196	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009065	Chromosome_4A	474	1	2	40.08438818565401	0.10772727272727273	24.770642201834864	2	0	24.770642201834864	2	0	NA	NA	NA	8.88888888888889	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015554	Chromosome_4A	182	1	10	57.69230769230769	0.6632653061224489	NA	0	NA	NA	NA	NA	NA	NA	NA	1.7391304347826086	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009066	Chromosome_4A	6331	6	225	39.15653135365661	0.9280245531787923	0.6476399560922064	200	0	0.25614754098360654	42	0	0.7544006705783739	158	0	0.6932409012131716	28	0	unmethylated (<10%)	O73853	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN009067	Chromosome_4A	9509	4	210	35.324429487853614	0.7079965112321307	0.5752177039226651	204	0	0.9221311475409836	13	0	0.5458799064205875	191	0	1.6552716804605974	52	0	unmethylated (<10%)	Q8TC57	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)	chromatin organization [GO:0006325]; female gamete generation [GO:0007292]; homologous chromosome pairing at meiosis [GO:0007129]; male meiosis chromosome separation [GO:0051308]; meiotic DNA double-strand break formation [GO:0042138]; resolution of meiotic recombination intermediates [GO:0000712]; RNA processing [GO:0006396]; spermatogenesis [GO:0007283]	hit with GO BP
GN009068	Chromosome_4A	5305	3	143	36.47502356267672	0.8115300022678745	0.6065400843881856	143	0	0	5	0	0.631347790282734	138	0	0.6152584085315833	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009069	Chromosome_4A	1959	3	54	34.60949464012251	0.9205186216498433	0.4997369805365597	53	0	0.7616146230007617	21	0	0.3615910004017678	32	0	1.1162179908076166	18	0	unmethylated (<10%)	Q8TC57	Meiosis 1 arrest protein (Meiosis 1-arresting protein) (Meiosis 1-associated protein) (Spermatogenesis-associated protein 37)	chromatin organization [GO:0006325]; female gamete generation [GO:0007292]; homologous chromosome pairing at meiosis [GO:0007129]; male meiosis chromosome separation [GO:0051308]; meiotic DNA double-strand break formation [GO:0042138]; resolution of meiotic recombination intermediates [GO:0000712]; RNA processing [GO:0006396]; spermatogenesis [GO:0007283]	hit with GO BP
GN009070	Chromosome_4A	486	1	24	40.32921810699588	1.2190635451505016	0.7722007722007722	24	0	0.7722007722007722	24	0	NA	NA	NA	0.4871447902571042	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009071	Chromosome_4A	1350	1	39	38.666666666666664	0.8023346184910318	0.3770028275212064	39	0	0.3770028275212064	39	0	NA	NA	NA	0.7779349363507779	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009072	Chromosome_4A	378	2	5	45.767195767195766	0.31105990783410137	0	5	0	0	5	0	NA	NA	NA	0.5274261603375527	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009073	Chromosome_4A	192	1	2	53.645833333333336	0.14883720930232558	NA	0	NA	NA	NA	NA	NA	NA	NA	27.77777777777778	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009074	Chromosome_4A	15644	8	224	34.63308616722066	0.4786586298687391	77.1358024691358	192	0.90625	58.035714285714285	2	1	77.34944572056327	190	0.9052631578947369	2.1939953810623556	36	0	methylated (>=50%)	Q8IZU3	Synaptonemal complex protein 3 (SCP-3)	homologous chromosome pairing at meiosis [GO:0007129]; homologous recombination [GO:0035825]; male meiosis I [GO:0007141]; meiotic cell cycle [GO:0051321]; reciprocal meiotic recombination [GO:0007131]; sperm DNA condensation [GO:0035092]; spermatid development [GO:0007286]	hit with GO BP
GN009075	Chromosome_4A	8050	6	112	34.63354037267081	0.4665152665258221	86.52116207049107	110	0.8818181818181818	60.78629032258065	23	0.5217391304347826	90.9310761789601	87	0.9770114942528736	49.088145896656535	33	0.42424242424242425	methylated (>=50%)	O14756	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.239) (EC 1.1.1.53) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase) (Short chain dehydrogenase/reductase family 9C member 6)	androgen biosynthetic process [GO:0006702]; androgen catabolic process [GO:0006710]; brexanolone catabolic process [GO:0062175]; estrogen biosynthetic process [GO:0006703]; retinol metabolic process [GO:0042572]	hit with GO BP
GN009076	Chromosome_4A	1560	1	72	45.64102564102564	0.9439290036304961	97.2373188405797	72	0.9861111111111112	97.2373188405797	72	0.9861111111111112	NA	NA	NA	91.30434782608695	19	0.8947368421052632	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009077	Chromosome_4A	6553	4	98	37.75370059514726	0.42664886178294653	94.92588369441278	88	1	95.72139303482587	40	1	93.8584779706275	48	1	76.95627157652474	46	0.7391304347826086	methylated (>=50%)	Q96BK5	PIN2/TERF1-interacting telomerase inhibitor 1 (Liver-related putative tumor suppressor) (Pin2-interacting protein X1) (Protein 67-11-3) (TRF1-interacting protein 1)	mitotic metaphase chromosome alignment [GO:0007080]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of G2/M transition of mitotic cell cycle [GO:0010972]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of telomere maintenance via telomerase [GO:0032211]; negative regulation of telomere maintenance via telomere lengthening [GO:1904357]; positive regulation of protein localization to nucleolus [GO:1904751]; protein localization to chromosome, telomeric region [GO:0070198]; protein localization to nucleolus [GO:1902570]; regulation of protein stability [GO:0031647]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN009078	Chromosome_4A	16704	12	387	35.75191570881226	0.7261959272039036	86.19670340262829	386	0.8963730569948186	94.08536585365853	30	1	85.7578943798121	356	0.8876404494382022	93.77491567003986	43	1	methylated (>=50%)	P62205	Serine/threonine-protein kinase PLK1 (EC 2.7.11.21) (Plx1) (Polo-like kinase 1) (PLK-1)	mitotic cell cycle [GO:0000278]; mitotic cleavage furrow formation [GO:1903673]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; mitotic spindle organization [GO:0007052]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; protein localization to chromatin [GO:0071168]	hit with GO BP
GN009079	Chromosome_4A	1173	1	53	41.94373401534527	1.027332066429811	0.7299270072992701	53	0	0.7299270072992701	53	0	NA	NA	NA	0.397456279809221	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009080	Chromosome_4A	5106	4	76	35.330983157070115	0.47726962457337885	71.04653611286587	63	0.8412698412698413	81.22866894197952	7	0.5714285714285714	70.3770197486535	56	0.875	13.30316742081448	35	0	methylated (>=50%)	Q2KIM0	Tissue alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucosidase I) (Alpha-L-fucoside fucohydrolase 1) (Alpha-L-fucosidase 1)	fucose metabolic process [GO:0006004]; glycolipid catabolic process [GO:0019377]; glycoside catabolic process [GO:0016139]	hit with GO BP
GN009081	Chromosome_4A	396	1	18	43.93939393939394	0.9428571428571428	0.8635578583765112	18	0	0.8635578583765112	18	0	NA	NA	NA	0.8615384615384616	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009082	Chromosome_4A	7278	10	242	37.26298433635614	0.9579904607587335	2.65807490938381	238	0.01680672268907563	10.56142301278488	50	0.08	0.909873355465388	188	0	1.5596330275229358	46	0	unmethylated (<10%)	O05527	Poly(3-hydroxybutyrate) depolymerase (P(3HB) depolymerase) (EC 3.1.1.75) (Polyhydroxybutyrate depolymerase) (PHB depolymerase)	NA	hit, no GO BP
GN009083	Chromosome_4A	14187	12	165	35.52548107422288	0.36883862680798846	85.85459700283515	164	0.9390243902439024	84.97560975609755	19	0.9473684210526315	85.95638910857531	145	0.9379310344827586	80.65503520048975	50	0.94	methylated (>=50%)	Q3UUJ4	STE20-related kinase adapter protein alpha (STRAD alpha) (STE20-related adapter protein)	activation of protein kinase activity [GO:0032147]; G1 to G0 transition [GO:0070314]; protein export from nucleus [GO:0006611]	hit with GO BP
GN009084	Chromosome_4A	9125	6	174	35.95616438356164	0.5916144451176298	83.49113862588007	174	0.9137931034482759	67.94773251345119	28	0.8214285714285714	85.32018813314038	146	0.9315068493150684	62.124542124542124	17	0.5294117647058824	methylated (>=50%)	Q7ZYA2	Transcription initiation factor TFIID subunit 8 (TBP-associated factor 8)	transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN009085	Chromosome_4A	34508	25	387	34.64703836791469	0.37883156244904553	40.68868587491216	377	0.4509283819628647	79.39221272554606	49	0.9387755102040817	36.4519985446229	328	0.3780487804878049	39.325113562621674	25	0.16	sparse (10-50%)	Q9Y4F9	Rho family-interacting cell polarization regulator 2	cellular response to chemokine [GO:1990869]; negative regulation of cell adhesion [GO:0007162]; negative regulation of establishment of T cell polarity [GO:1903904]; negative regulation of protein localization to cell leading edge [GO:1905872]; negative regulation of Rho guanyl-nucleotide exchange factor activity [GO:2001107]; negative regulation of Rho protein signal transduction [GO:0035024]; negative regulation of T cell migration [GO:2000405]; negative regulation of T cell proliferation [GO:0042130]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of myoblast fusion [GO:1901741]; positive regulation of neutrophil chemotaxis [GO:0090023]; positive regulation of neutrophil extravasation [GO:2000391]; regulation of cell cycle [GO:0051726]; regulation of establishment of cell polarity [GO:2000114]; regulation of mitotic spindle assembly [GO:1901673]; sensory perception of sound [GO:0007605]	hit with GO BP
GN009086	Chromosome_4A	270	1	14	50.370370370370374	0.8355437665782494	0.5333333333333333	14	0	0.5333333333333333	14	0	NA	NA	NA	2.2132796780684103	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009087	Chromosome_4A	10475	10	255	36.840095465393794	0.7178533132311562	0.4528100861227027	255	0	0.5422153369481022	70	0	0.42621817762930536	185	0	0.40160642570281124	34	0	unmethylated (<10%)	P54145	Putative ammonium transporter 1	ammonium homeostasis [GO:0097272]	hit with GO BP
GN009088	Chromosome_4A	987	1	19	40.3242147922999	0.4735964845821653	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5213764337851929	40	0	NA	Q9WUM7	Homeodomain-interacting protein kinase 2 (EC 2.7.11.1) (Mx-interacting protein kinase) (PKM)	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of transcription by RNA polymerase II [GO:0045944]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN009089	Chromosome_4A	3338	3	30	39.27501497902936	0.2336313412221434	100	1	1	100	1	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009090	Chromosome_4A	237	1	3	47.257383966244724	0.22701149425287356	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q9H2X6	Homeodomain-interacting protein kinase 2 (hHIPk2) (EC 2.7.11.1)	cellular response to hypoxia [GO:0071456]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; embryonic camera-type eye morphogenesis [GO:0048596]; embryonic retina morphogenesis in camera-type eye [GO:0060059]; epigenetic regulation of gene expression [GO:0040029]; erythrocyte differentiation [GO:0030218]; eye development [GO:0001654]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; iris morphogenesis [GO:0061072]; lens induction in camera-type eye [GO:0060235]; negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; neuron differentiation [GO:0030182]; peptidyl-serine phosphorylation [GO:0018105]; PML body organization [GO:0030578]; positive regulation of angiogenesis [GO:0045766]; positive regulation of JNK cascade [GO:0046330]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; protein phosphorylation [GO:0006468]; regulation of cell cycle [GO:0051726]; regulation of signal transduction by p53 class mediator [GO:1901796]; retina layer formation [GO:0010842]; SMAD protein signal transduction [GO:0060395]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN009091	Chromosome_4A	494	3	10	35.020242914979754	0.660781166399144	0.5303030303030303	10	0	0.5042016806722689	9	0	0.7692307692307693	1	0	0.45513654096228867	43	0	unmethylated (<10%)	Q9YH37	Ras-related protein Rap-1b (EC 3.6.5.2)	Rap protein signal transduction [GO:0032486]	hit with GO BP
GN009092	Chromosome_4A	25720	7	445	34.56842923794712	0.5792591087019543	82.72656045965005	444	0.9527027027027027	88.443976115209	49	0.9795918367346939	82.26730242925261	395	0.9493670886075949	2.8925619834710745	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009093	Chromosome_4A	582	1	11	36.94158075601374	0.5673520028358738	4.713375796178344	11	0	4.713375796178344	11	0	NA	NA	NA	1.7782426778242677	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009094	Chromosome_4A	1266	3	42	40.12638230647709	0.8252036936447583	0.8579599618684461	42	0	0.9953161592505855	36	0	0.2564102564102564	6	0	0.4223521767381416	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009095	Chromosome_4A	492	2	9	44.71544715447155	0.36643495531281034	0	2	0	0	2	0	NA	NA	NA	4.647348277747403	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009096	Chromosome_4A	285	1	17	52.280701754385966	0.8729729729729729	0.8264462809917356	17	0	0.8264462809917356	17	0	NA	NA	NA	0.734341252699784	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009097	Chromosome_4A	153	1	12	52.94117647058823	1.1845161290322581	1.5779092702169626	12	0	1.5779092702169626	12	0	NA	NA	NA	2.001819836214741	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009098	Chromosome_4A	18361	11	511	34.86193562442133	0.9163428407350689	1.042605225897799	509	0	1.0594467333725721	71	0	1.0405376110990678	438	0	1.1790714812085483	55	0	unmethylated (<10%)	O73917	Paired box protein Pax-6	brain development [GO:0007420]; forebrain development [GO:0030900]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; sensory organ development [GO:0007423]; sensory organ morphogenesis [GO:0090596]; type B pancreatic cell differentiation [GO:0003309]	hit with GO BP
GN009099	Chromosome_4A	543	1	23	40.331491712707184	1.0553489944228494	0	3	0	0	3	0	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009100	Chromosome_4A	543	1	23	40.515653775322285	1.0445801271328203	0.819672131147541	23	0	0.819672131147541	23	0	NA	NA	NA	0.38095238095238093	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009101	Chromosome_4A	714	1	31	43.55742296918768	0.9181184668989547	0.7633587786259542	8	0	0.7633587786259542	8	0	NA	NA	NA	1.17096018735363	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009102	Chromosome_4A	1289	2	23	40.65166795965865	0.43265764779709004	94.0212150433944	23	1	94.0212150433944	23	1	NA	NA	NA	67.05969049373618	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009103	Chromosome_4A	543	1	12	47.882136279926335	0.38668328289122306	91.76829268292683	12	1	91.76829268292683	12	1	NA	NA	NA	59.26229508196721	19	0.6842105263157895	methylated (>=50%)	Q9D8N3	Lysoplasmalogenase TMEM86A (EC 3.3.2.2) (Transmembrane protein 86A)	NA	hit, no GO BP
GN009104	Chromosome_4A	10940	2	180	36.29798903107861	0.4995175287732446	81.02046537706757	180	0.9555555555555556	28.07017543859649	3	0.3333333333333333	82.17320729494891	177	0.9661016949152542	0.7604562737642585	72	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009105	Chromosome_4A	13702	10	195	35.75390453948329	0.46026375301285344	87.7268532759151	194	0.9587628865979382	90.27611044417768	26	1	87.35226671370611	168	0.9523809523809523	73.24913892078071	23	0.9130434782608695	methylated (>=50%)	Q8BSY0	Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16) (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)	activation of store-operated calcium channel activity [GO:0032237]; calcium ion homeostasis [GO:0055074]; calcium ion transmembrane transport [GO:0070588]; cellular response to calcium ion [GO:0071277]; face morphogenesis [GO:0060325]; limb morphogenesis [GO:0035108]; negative regulation of cell population proliferation [GO:0008285]; pattern specification process [GO:0007389]; peptidyl-aspartic acid hydroxylation [GO:0042264]; phosphatidylinositol-mediated signaling [GO:0048015]; positive regulation of calcium ion transport into cytosol [GO:0010524]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of intracellular protein transport [GO:0090316]; positive regulation of proteolysis [GO:0045862]; regulation of cytosolic calcium ion concentration [GO:0051480]; regulation of protein depolymerization [GO:1901879]; regulation of protein stability [GO:0031647]; response to ATP [GO:0033198]; roof of mouth development [GO:0060021]	hit with GO BP
GN009106	Chromosome_4A	8509	7	242	34.89246679985897	0.9352044282802446	1.926291490885935	242	0	2.931937172774869	71	0	1.6292018972984121	171	0	12.409638554216867	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009107	Chromosome_4A	2292	3	90	41.361256544502616	0.918383701672217	0.4023408924652524	90	0	0.4066877541798464	81	0	0.3838771593090211	9	0	0.3005259203606311	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009108	Chromosome_4A	294	1	8	43.53741496598639	0.5747800586510264	0.3937007874015748	8	0	0.3937007874015748	8	0	NA	NA	NA	0.6750241080038573	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009109	Chromosome_4A	393	1	18	40.966921119592875	1.1105180533751962	1.0033444816053512	14	0	1.0033444816053512	14	0	NA	NA	NA	0.6554989075018208	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009110	Chromosome_4A	786	1	35	42.87531806615776	0.9708498023715415	0.9478672985781991	9	0	0.9478672985781991	9	0	NA	NA	NA	1.3253527148353998	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009111	Chromosome_4A	1023	1	55	45.06353861192571	1.0590062111801242	1.3241220495106505	55	0	1.3241220495106505	55	0	NA	NA	NA	1.37434554973822	53	0	unmethylated (<10%)	P29371	Neuromedin-K receptor (NKR) (NK-3 receptor) (NK-3R) (Neurokinin B receptor) (Tachykinin receptor 3)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; conditioned place preference [GO:1990708]; drinking behavior [GO:0042756]; phospholipase C-activating tachykinin receptor signaling pathway [GO:0007209]; positive regulation of blood pressure [GO:0045777]; positive regulation of flagellated sperm motility [GO:1902093]; positive regulation of heart rate [GO:0010460]; positive regulation of luteinizing hormone secretion [GO:0033686]; positive regulation of uterine smooth muscle contraction [GO:0070474]; regulation of dopamine metabolic process [GO:0042053]; regulation of feeding behavior [GO:0060259]; response to cocaine [GO:0042220]; response to estradiol [GO:0032355]; tachykinin receptor signaling pathway [GO:0007217]; vagina development [GO:0060068]	hit with GO BP
GN009112	Chromosome_4A	297	1	14	45.45454545454545	0.9166666666666666	0.3033367037411527	14	0	0.3033367037411527	14	0	NA	NA	NA	0.30927835051546393	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009113	Chromosome_4A	3452	3	123	39.10776361529548	0.9398270400924341	0.6698764915218757	123	0	0.7643884892086331	63	0	0.5875440658049353	60	0	1.048951048951049	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009114	Chromosome_4A	21765	22	297	37.486790719044336	0.3884201702889625	87.70124376538922	293	0.9931740614334471	88.90163464295956	88	1	87.36237046632124	205	0.9902439024390244	0.6148867313915858	57	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009115	Chromosome_4A	1619	4	10	31.192093885114268	0.25446372438073683	NA	0	NA	NA	NA	NA	NA	NA	NA	17.9860302677532	36	0.027777777777777776	NA	NA	NA	NA	no Swiss-Prot hit
GN009116	Chromosome_4A	22113	17	301	38.447971781305114	0.36834783700108775	86.58384473382229	300	0.9933333333333333	92.52839210998206	56	1	85.3925854944002	244	0.9918032786885246	90.60185185185185	58	1	methylated (>=50%)	Q9R1X4	Protein timeless homolog (mTim)	branching involved in ureteric bud morphogenesis [GO:0001658]; branching morphogenesis of an epithelial tube [GO:0048754]; cell cycle phase transition [GO:0044770]; cellular response to bleomycin [GO:1904976]; cellular response to cisplatin [GO:0072719]; cellular response to hydroxyurea [GO:0072711]; circadian rhythm [GO:0007623]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA replication checkpoint signaling [GO:0000076]; kidney development [GO:0001822]; lung development [GO:0030324]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; morphogenesis of an epithelium [GO:0002009]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of circadian rhythm [GO:0042753]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; regulation of circadian rhythm [GO:0042752]; replication fork arrest [GO:0043111]; replication fork processing [GO:0031297]	hit with GO BP
GN009117	Chromosome_4A	1857	1	42	40.44157242864836	0.5683948170065152	76.64556962025317	42	0.9761904761904762	76.64556962025317	42	0.9761904761904762	NA	NA	NA	70.51136363636364	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009118	Chromosome_4A	22730	18	249	33.81874175098988	0.38720828040929717	84.37330765990734	247	0.9838056680161943	91.95876288659794	38	0.9736842105263158	83.37080182573744	209	0.9856459330143541	49.41531497548095	48	0.4791666666666667	methylated (>=50%)	Q9UNS1	Protein timeless homolog (hTIM)	cell cycle phase transition [GO:0044770]; cellular response to bleomycin [GO:1904976]; cellular response to cisplatin [GO:0072719]; cellular response to hydroxyurea [GO:0072711]; circadian rhythm [GO:0007623]; detection of abiotic stimulus [GO:0009582]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; DNA replication checkpoint signaling [GO:0000076]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; morphogenesis of an epithelium [GO:0002009]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; regulation of circadian rhythm [GO:0042752]; replication fork arrest [GO:0043111]; replication fork processing [GO:0031297]	hit with GO BP
GN009119	Chromosome_4A	33081	9	434	35.39493969347964	0.42385770437327186	91.09110947832477	414	0.9758454106280193	84.61926374180534	43	0.9069767441860465	91.59963545587827	371	0.9838274932614556	57.17619603267211	45	0.5555555555555556	methylated (>=50%)	Q8IZP0	Abl interactor 1 (Abelson interactor 1) (Abi-1) (Abl-binding protein 4) (AblBP4) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (Nap1-binding protein) (Nap1BP) (Spectrin SH3 domain-binding protein 1) (e3B1)	actin polymerization or depolymerization [GO:0008154]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; negative regulation of cell population proliferation [GO:0008285]; neuron migration [GO:0001764]; positive regulation of protein tyrosine kinase activity [GO:0061098]	hit with GO BP
GN009120	Chromosome_4A	429	1	22	54.07925407925408	0.7960526315789473	0	22	0	0	22	0	NA	NA	NA	0.9306803594351734	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009121	Chromosome_4A	10267	3	300	35.60923346644589	0.9250983035209059	2.0255624486134987	255	0	1.606425702811245	30	0	2.050348321722609	225	0	2.7027027027027026	7	0	unmethylated (<10%)	P20009	Homeotic protein distal-less (Protein brista)	analia development [GO:0007487]; antennal development [GO:0007469]; cell differentiation [GO:0030154]; determination of ventral identity [GO:0048264]; genital disc development [GO:0035215]; imaginal disc-derived appendage morphogenesis [GO:0035114]; imaginal disc-derived leg morphogenesis [GO:0007480]; imaginal disc-derived male genitalia development [GO:0007485]; imaginal disc-derived wing margin morphogenesis [GO:0008587]; leg disc proximal/distal pattern formation [GO:0007479]; mushroom body development [GO:0016319]; negative regulation of gene expression [GO:0010629]; positive regulation of DNA-templated transcription [GO:0045893]; proboscis development [GO:0048728]; proximal/distal pattern formation, imaginal disc [GO:0007449]; regulation of transcription by RNA polymerase II [GO:0006357]; specification of animal organ identity [GO:0010092]	hit with GO BP
GN009122	Chromosome_4A	929	2	13	38.85898815931109	0.3801624276001007	3.1847133757961785	6	0	3.787878787878788	4	0	0	2	0	1.7182130584192439	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009123	Chromosome_4A	606	1	17	37.95379537953795	0.7875544683128202	0.6063668519454269	17	0	0.6063668519454269	17	0	NA	NA	NA	0.4961411245865491	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009124	Chromosome_4A	255	1	11	42.745098039215684	0.9482758620689655	0	11	0	0	11	0	NA	NA	NA	0.8417508417508418	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009125	Chromosome_4A	228	1	11	50	0.8017902813299232	0.6651884700665188	11	0	0.6651884700665188	11	0	NA	NA	NA	5.063091482649842	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009126	Chromosome_4A	150	1	8	40.666666666666664	1.3729977116704806	0.22935779816513763	8	0	0.22935779816513763	8	0	NA	NA	NA	1.2468827930174564	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009127	Chromosome_4A	186	1	6	47.31182795698925	0.58125	0.6329113924050633	6	0	0.6329113924050633	6	0	NA	NA	NA	0.3771213073538655	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009128	Chromosome_4A	6165	1	179	39.35117599351176	0.7800349891321635	0.41841004184100417	151	0	0.41841004184100417	151	0	NA	NA	NA	0.6568144499178982	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009129	Chromosome_4A	715	2	35	51.60839160839161	0.7352941176470589	1.0235414534288638	35	0	1.0235414534288638	35	0	NA	NA	NA	1.0215664018161181	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009130	Chromosome_4A	249	1	7	42.570281124497996	0.6349726775956284	1.607717041800643	7	0	1.607717041800643	7	0	NA	NA	NA	0.5145797598627787	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009131	Chromosome_4A	21545	9	322	36.077976328614525	0.46012228028375013	82.64388489208633	317	0.9305993690851735	86.73862760215883	31	1	82.37607785789925	286	0.9230769230769231	86.25604479511325	42	0.9761904761904762	methylated (>=50%)	Q4KLQ5	WD repeat-containing protein 76	regulation of DNA damage checkpoint [GO:2000001]	hit with GO BP
GN009132	Chromosome_4A	7286	7	99	35.75349986275048	0.42567302006578833	84.3991002570694	99	0.9797979797979798	87.19560094265515	27	1	83.6800646334074	72	0.9722222222222222	51.24497991967871	19	0.631578947368421	methylated (>=50%)	P40237	CD82 antigen (C33 antigen) (IA4) (Inducible membrane protein R2) (Metastasis suppressor Kangai-1 homolog) (CD antigen CD82)	NA	hit, no GO BP
GN009133	Chromosome_4A	7937	6	104	35.756583091848306	0.4100032186410977	90.23652854348212	104	0.9807692307692307	92.76274386406546	31	1	89.24144769459593	73	0.9726027397260274	35.79063767047549	44	0.36363636363636365	methylated (>=50%)	A6NJ78	12S rRNA N(4)-cytidine methyltransferase METTL15 (12S rRNA m4C methyltransferase) (EC 2.1.1.-) (Methyltransferase 5 domain-containing protein 1) (Methyltransferase-like protein 15)	mitochondrial small ribosomal subunit assembly [GO:0180026]; rRNA base methylation [GO:0070475]	hit with GO BP
GN009134	Chromosome_4A	3218	2	42	37.880671224362956	0.3676873857404022	54.123711340206185	20	0.5	54.123711340206185	20	0.5	NA	NA	NA	54.03973509933775	17	0.5882352941176471	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009135	Chromosome_4A	4195	4	122	36.7342073897497	0.8621392521916083	0.9042553191489362	119	0	0.3333333333333333	38	0	1.0585585585585586	81	0	1.2195121951219512	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009136	Chromosome_4A	285	1	13	46.666666666666664	0.9461184882533197	1.3392857142857142	13	0	1.3392857142857142	13	0	NA	NA	NA	3.134796238244514	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009137	Chromosome_4A	1221	1	60	44.22604422604422	1.0056141988442162	0.45632333767926986	60	0	0.45632333767926986	60	0	NA	NA	NA	0.9582477754962354	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009138	Chromosome_4A	321	1	21	48.28660436137071	1.1227514990006662	0.7682458386683739	21	0	0.7682458386683739	21	0	NA	NA	NA	1.7682643089809214	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009139	Chromosome_4A	6124	3	221	37.90006531678642	1.0050691456417675	0.7618482240031661	221	0	0.48115477145148355	30	0	0.801354401805869	191	0	0.8909630886720408	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009140	Chromosome_4A	10945	5	139	35.68752855185016	0.39956953211897095	75.04860661049902	139	0.7913669064748201	51.04408352668214	23	0.34782608695652173	78.06799941631402	116	0.8793103448275862	0.875	55	0	methylated (>=50%)	Q9UBU6	Protein FAM8A1 (Autosomal highly conserved protein)	ERAD pathway [GO:0036503]	hit with GO BP
GN009141	Chromosome_4A	5532	3	184	39.497469269703544	0.8529139685476411	3.1290184312044578	167	0	0.3424657534246575	33	0	3.5276825085742285	134	0	1.3358778625954197	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009142	Chromosome_4A	492	1	26	46.951219512195124	0.9933219444013045	0	19	0	0	19	0	NA	NA	NA	1.4297061159650517	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009143	Chromosome_4A	981	1	35	39.65341488277268	0.9199174793698425	0.6610576923076923	35	0	0.6610576923076923	35	0	NA	NA	NA	0.07668711656441718	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009144	Chromosome_4A	16668	8	229	34.077273818094554	0.4733818426160634	52.92370945637277	226	0.6283185840707964	86.21456364647027	33	0.9696969696969697	47.64005293339215	193	0.5699481865284974	1.157580283793876	46	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009145	Chromosome_4A	11052	5	163	34.86246833152371	0.4861165529546242	86.8959801077497	162	0.9259259259259259	95.95141700404858	16	1	86.08829105353435	146	0.9178082191780822	96.35658914728683	36	1	methylated (>=50%)	Q7ZXH2	E3 SUMO-protein ligase NSE2 (EC 2.3.2.-) (E3 SUMO-protein transferase NSE2) (MMS21 homolog) (Non-structural maintenance of chromosomes element 2 homolog) (Non-SMC element 2 homolog)	cellular senescence [GO:0090398]; double-strand break repair via homologous recombination [GO:0000724]; positive regulation of maintenance of mitotic sister chromatid cohesion [GO:0034184]; positive regulation of mitotic metaphase/anaphase transition [GO:0045842]; protein sumoylation [GO:0016925]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN009146	Chromosome_4A	1095	1	19	40	0.43379899916597164	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009147	Chromosome_4A	1677	1	41	41.97972570065593	0.5549932196822936	0	7	0	0	7	0	NA	NA	NA	0.4775549188156638	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009148	Chromosome_4A	1027	2	28	37.877312560856865	0.7756379133624642	6.245297215951844	28	0	6.074074074074074	17	0	6.422018348623853	11	0	1.3015184381778742	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009149	Chromosome_4A	216	1	9	49.074074074074076	0.6982758620689655	0.3861003861003861	9	0	0.3861003861003861	9	0	NA	NA	NA	0.7545671167593329	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009150	Chromosome_4A	18678	13	243	34.32380340507549	0.4436128600945722	79.82365907421014	232	0.8275862068965517	92.22520107238606	22	1	78.71267312464975	210	0.8095238095238095	80.33240997229917	37	1	methylated (>=50%)	A4FUZ5	Serine incorporator 3	antiviral innate immune response [GO:0140374]; plasma membrane phospholipid scrambling [GO:0017121]	hit with GO BP
GN009151	Chromosome_4A	3966	1	54	40.97327281896117	0.32557418319134573	93.79157427937916	48	1	93.79157427937916	48	1	NA	NA	NA	81.86304750154225	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019906	Chromosome_4A	504	1	17	48.41269841269841	0.5766202301635373	1.0570824524312896	15	0	1.0570824524312896	15	0	NA	NA	NA	0.449162923642303	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019907	Chromosome_4A	1455	1	46	48.65979381443299	0.5353243699360938	0.9868421052631579	20	0	0.9868421052631579	20	0	NA	NA	NA	0.37122969837587005	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009152	Chromosome_4A	588	1	11	36.054421768707485	0.5757009345794393	10.636079249217936	11	0	10.636079249217936	11	0	NA	NA	NA	24.070631970260223	14	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009153	Chromosome_4A	1758	3	30	39.81797497155859	0.43809808612440193	92.40426867545511	30	1	90.27237354085604	5	1	92.81437125748504	25	1	93.1610337972167	37	1	methylated (>=50%)	Q9UQ80	Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1)	negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of cell differentiation [GO:0045597]	hit with GO BP
GN009154	Chromosome_4A	1344	1	54	43.080357142857146	0.8707587464606229	1.7745302713987474	54	0	1.7745302713987474	54	0	NA	NA	NA	0.7159904534606205	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009155	Chromosome_4A	1077	3	34	40.575673166202414	0.7784438775510204	0.7674597083653109	34	0	0.7312614259597806	29	0	0.9569377990430622	5	0	2.4732069249793898	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009156	Chromosome_4A	9428	4	95	34.492999575731865	0.34301821252606646	51.19929453262787	95	0.49473684210526314	46.23287671232877	7	0.42857142857142855	51.46894756415024	88	0.5	89.64896489648964	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009157	Chromosome_4A	7545	6	102	34.27435387673956	0.4603931698685027	75.63924927572742	100	0.89	48.24707846410684	11	0.6363636363636364	77.87465940054496	89	0.9213483146067416	24.515322076297686	28	0.35714285714285715	methylated (>=50%)	Q3SZ45	Stromal cell-derived factor 2 (SDF-2)	NA	hit, no GO BP
GN009158	Chromosome_4A	36477	13	401	35.54568632288839	0.3495997759468054	79.32803194602224	399	0.9197994987468672	75.97816196542311	20	0.9	79.4597495527728	379	0.920844327176781	68.65912762520193	21	0.7619047619047619	methylated (>=50%)	Q6DEJ5	Alanyl-tRNA editing protein Aarsd1 (Alanyl-tRNA synthetase domain-containing protein 1)	regulation of translational fidelity [GO:0006450]; tRNA aminoacylation [GO:0043039]	hit with GO BP
GN009159	Chromosome_4A	591	1	15	39.59390862944162	0.6785823637477036	5.541561712846348	15	0	5.541561712846348	15	0	NA	NA	NA	2.2739432851792403	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009160	Chromosome_4A	231	1	8	45.887445887445885	0.6875	2.990033222591362	8	0	2.990033222591362	8	0	NA	NA	NA	2.8609154929577465	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009161	Chromosome_4A	1594	3	57	39.96235884567127	0.9096533910013817	0.5291005291005291	57	0	0.6459948320413437	50	0	0	7	0	0.5240590757503573	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009162	Chromosome_4A	16900	8	215	35.81065088757396	0.399368572292801	85.00410172272355	213	0.9389671361502347	95.02196193265007	31	1	83.73983739837398	182	0.9285714285714286	92.40717563621193	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009163	Chromosome_4A	1905	5	55	37.95275590551181	0.8043404830265158	1.271186440677966	55	0	1.4035087719298245	28	0	1.1820330969267139	27	0	0.5390835579514824	45	0	unmethylated (<10%)	P47875	Cysteine and glycine-rich protein 1 (Cysteine-rich protein 1) (CRP) (CRP1)	muscle tissue development [GO:0060537]; nervous system development [GO:0007399]; sarcomere organization [GO:0045214]	hit with GO BP
GN009164	Chromosome_4A	2141	3	60	38.86034563288183	0.7423030695266272	0.5376344086021505	16	0	0.4024144869215292	13	0	1.639344262295082	3	0	4.385964912280702	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009165	Chromosome_4A	672	1	28	43.30357142857143	0.8918380889183809	0	12	0	0	12	0	NA	NA	NA	1.2906097018246552	58	0	unmethylated (<10%)	Q8N8K9	Uncharacterized protein KIAA1958	NA	hit, no GO BP
GN009166	Chromosome_4A	1263	1	55	43.151227236737924	0.9389192257785467	0.5084745762711864	49	0	0.5084745762711864	49	0	NA	NA	NA	0.4568106312292359	49	0	unmethylated (<10%)	Q61212	Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic polypeptide receptor 2) (PP2)	NA	hit, no GO BP
GN009167	Chromosome_4A	195	1	11	51.794871794871796	0.8511904761904762	0.9771986970684039	11	0	0.9771986970684039	11	0	NA	NA	NA	0.9200438116100766	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009168	Chromosome_4A	1050	1	18	40.857142857142854	0.41385652973635806	90.49858889934148	18	1	90.49858889934148	18	1	NA	NA	NA	95.85342333654773	26	1	methylated (>=50%)	B4F6I5	Protein adenylyltransferase FICD (EC 2.7.7.108) (AMPylator FICD) (De-AMPylase FICD) (EC 3.1.4.-) (FIC domain-containing protein)	protein adenylylation [GO:0018117]; protein deadenylylation [GO:0044602]; regulation of IRE1-mediated unfolded protein response [GO:1903894]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN009169	Chromosome_4A	16642	14	224	34.94171373632977	0.44295738715827965	88.6598596043395	223	0.9820627802690582	94.02197802197803	42	1	87.7491601343785	181	0.9779005524861878	76.92731277533039	27	0.7407407407407407	methylated (>=50%)	Q6DRI7	ATP-dependent RNA helicase DDX51 (EC 3.6.4.13) (DEAD box protein 51)	NA	hit, no GO BP
GN009170	Chromosome_4A	303	1	11	53.79537953795379	0.5027149321266968	0.49019607843137253	11	0	0.49019607843137253	11	0	NA	NA	NA	32.4282982791587	44	0.29545454545454547	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009171	Chromosome_4A	2055	3	79	40.5352798053528	0.9362456747404845	0.4551096400496483	79	0	0.5042864346949067	71	0	0.2304147465437788	8	0	0.46296296296296297	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009172	Chromosome_4A	751	2	24	44.207723035952064	0.671860439109852	1.2269938650306749	24	0	1.2269938650306749	24	0	NA	NA	NA	2.1534320323014806	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009173	Chromosome_4A	725	2	27	43.172413793103445	0.8082163501238646	0.39254170755642787	27	0	0.6644518272425249	17	0	0	10	0	0.4708904109589041	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009174	Chromosome_4A	216	1	13	54.629629629629626	0.8547945205479452	92.94871794871794	13	1	92.94871794871794	13	1	NA	NA	NA	56.83836589698046	9	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009175	Chromosome_4A	6378	3	100	36.98651614926309	0.46344536532835734	17.247305108576786	100	0.17	9.005714285714285	70	0.1	35.04442250740375	30	0.3333333333333333	53.99449035812672	10	0.7	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009176	Chromosome_4A	1405	2	48	40.213523131672595	0.8454942079133444	0.8843537414965986	47	0	0.931899641577061	45	0	0	2	0	0.41306796845662785	46	0	unmethylated (<10%)	Q5IS76	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN009177	Chromosome_4A	1233	1	45	41.68694241686942	0.8405162619484041	0.5813953488372093	45	0	0.5813953488372093	45	0	NA	NA	NA	1.0362694300518134	40	0	unmethylated (<10%)	Q5IS76	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN009178	Chromosome_4A	1191	1	44	40.890008396305625	0.8851727982162765	0.6781750924784217	44	0	0.6781750924784217	44	0	NA	NA	NA	0.33444816053511706	43	0	unmethylated (<10%)	Q9R0W9	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN009179	Chromosome_4A	12379	8	164	32.94288714758866	0.48880599889822446	84.61829176114891	159	0.9559748427672956	93.03030303030303	13	1	84.17661097852029	146	0.952054794520548	91.16615519508987	52	1	methylated (>=50%)	Q9XYM0	Adapter molecule Crk	border follicle cell migration [GO:0007298]; cell migration [GO:0016477]; enzyme-linked receptor protein signaling pathway [GO:0007167]; ephrin receptor signaling pathway [GO:0048013]; imaginal disc fusion, thorax closure [GO:0046529]; myoblast fusion [GO:0007520]; phagocytosis, engulfment [GO:0006911]; positive regulation of JNK cascade [GO:0046330]; regulation of actin cytoskeleton organization [GO:0032956]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]	hit with GO BP
GN009180	Chromosome_4A	363	1	21	47.107438016528924	1.045679012345679	0.7005253940455342	21	0	0.7005253940455342	21	0	NA	NA	NA	0.688360450563204	44	0	unmethylated (<10%)	O42412	Thyroxine 5-deiodinase (EC 1.21.99.3) (5DIII) (DIOIII) (Type 3 DI) (Type III iodothyronine deiodinase)	thyroid hormone catabolic process [GO:0042404]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN009181	Chromosome_4A	405	1	11	42.71604938271605	0.5955882352941176	1.0067114093959733	11	0	1.0067114093959733	11	0	NA	NA	NA	1.3377926421404682	56	0	unmethylated (<10%)	Q6U6H1	Thyroxine 5'-deiodinase (EC 1.21.99.4) (Iodothyronine deiodinase)	thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN009182	Chromosome_4A	375	1	22	46.93333333333333	1.0654784967067028	0.14184397163120568	22	0	0.14184397163120568	22	0	NA	NA	NA	1.4157621519584709	62	0	unmethylated (<10%)	O42412	Thyroxine 5-deiodinase (EC 1.21.99.3) (5DIII) (DIOIII) (Type 3 DI) (Type III iodothyronine deiodinase)	thyroid hormone catabolic process [GO:0042404]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN009183	Chromosome_4A	1248	1	52	40.78525641025641	1.0030603728090512	0.693000693000693	52	0	0.693000693000693	52	0	NA	NA	NA	1.0195412064570943	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009184	Chromosome_4A	1514	3	38	35.53500660501982	0.7986451406915891	0.8373732921992068	38	0	0.8495145631067961	17	0	0.8304498269896193	21	0	0.6442705936493327	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009185	Chromosome_4A	871	2	39	44.776119402985074	0.8941798941798942	7.6923076923076925	12	0	7.142857142857143	11	0	11.11111111111111	1	0	0.47058823529411764	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009186	Chromosome_4A	456	1	6	35.526315789473685	0.4201474201474201	0.4784688995215311	6	0	0.4784688995215311	6	0	NA	NA	NA	0.6809848088004191	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009187	Chromosome_4A	186	1	5	54.30107526881721	0.37289494787489974	2.0408163265306123	5	0	2.0408163265306123	5	0	NA	NA	NA	0.35714285714285715	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009188	Chromosome_4A	4477	3	57	42.908197453652	0.2790323109726095	86.3529411764706	57	1	88.55721393034825	52	1	75.7679180887372	5	1	68.48944233892799	29	0.9655172413793104	methylated (>=50%)	Q52V16	Zinc finger Y-chromosomal protein	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009189	Chromosome_4A	17246	16	197	33.97309521048359	0.39674505432344254	86.04427333974976	197	0.9746192893401016	89.4006309148265	28	1	85.6338245505748	169	0.9704142011834319	74.85002307337332	33	0.9393939393939394	methylated (>=50%)	Q6P3R8	Serine/threonine-protein kinase Nek5 (EC 2.7.11.1) (Never in mitosis A-related kinase 5) (NimA-related protein kinase 5)	NA	hit, no GO BP
GN009190	Chromosome_4A	1596	4	57	39.473684210526315	0.9174171297183369	0.6321112515802781	57	0	0.7471980074719801	23	0	0.5732484076433121	34	0	0.7327586206896551	58	0	unmethylated (<10%)	P20807	Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (New calpain 1) (nCL-1)	apoptotic process [GO:0006915]; calcium-dependent self proteolysis [GO:1990092]; cellular response to calcium ion [GO:0071277]; cellular response to salt stress [GO:0071472]; G1 to G0 transition involved in cell differentiation [GO:0070315]; muscle cell cellular homeostasis [GO:0046716]; muscle organ development [GO:0007517]; muscle structure development [GO:0061061]; myofibril assembly [GO:0030239]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of protein sumoylation [GO:0033234]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of proteolysis [GO:0045862]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; positive regulation of satellite cell activation involved in skeletal muscle regeneration [GO:0014718]; protein catabolic process [GO:0030163]; protein destabilization [GO:0031648]; protein localization to membrane [GO:0072657]; protein-containing complex assembly [GO:0065003]; proteolysis [GO:0006508]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of myoblast differentiation [GO:0045661]; response to calcium ion [GO:0051592]; response to muscle activity [GO:0014850]; sarcomere organization [GO:0045214]; self proteolysis [GO:0097264]	hit with GO BP
GN009191	Chromosome_4A	252	1	8	42.06349206349206	0.7218045112781954	0.8968609865470852	8	0	0.8968609865470852	8	0	NA	NA	NA	4.325860435743606	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009192	Chromosome_4A	37685	35	503	34.71673079474592	0.44412509870394246	83.37187713755252	460	0.9456521739130435	81.7967409948542	85	0.9529411764705882	83.65403080231978	375	0.944	44.745262121585036	58	0.5344827586206896	methylated (>=50%)	Q8C761	Cytoplasmic dynein 2 intermediate chain 1 (Dynein 2 intermediate chain 1) (WD repeat-containing protein 60)	cilium assembly [GO:0060271]; embryonic skeletal system morphogenesis [GO:0048704]; intraciliary retrograde transport [GO:0035721]	hit with GO BP
GN009193	Chromosome_4A	7929	7	92	36.22146550636902	0.35871917621285104	85.18151160484031	92	0.9456521739130435	90.3866248693835	35	1	81.99552286536617	57	0.9122807017543859	85.08771929824562	10	1	methylated (>=50%)	Q7XR46	Polyamine oxidase 4 (OsPAO4) (EC 1.5.3.-)	spermine catabolic process [GO:0046208]; thermospermine catabolic process [GO:1903602]	hit with GO BP
GN009194	Chromosome_4A	366	1	14	39.61748633879781	0.9748858447488584	7.479224376731302	14	0	7.479224376731302	14	0	NA	NA	NA	53.79818594104309	26	0.4230769230769231	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009195	Chromosome_4A	6550	5	65	35.14503816793893	0.32136926328502413	92.81464530892448	64	1	94.98412698412699	29	1	91.59212880143113	35	1	92.71910112359551	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009196	Chromosome_4A	12137	15	212	36.401087583422594	0.5274705360571094	75.74316290130797	212	0.8679245283018868	78.64734299516908	41	0.9024390243902439	75.0648764526684	171	0.8596491228070176	0.8151287903488751	43	0	methylated (>=50%)	Q8N0X2	Sperm-associated antigen 16 protein (Pf20 protein homolog)	axoneme assembly [GO:0035082]; cilium assembly [GO:0060271]	hit with GO BP
GN009197	Chromosome_4A	9020	4	129	39.77827050997783	0.36191413442684955	87.30559875583204	120	0.9666666666666667	94.0427993059572	69	1	83.89458272327965	51	0.9215686274509803	50.49961568024597	19	0.3684210526315789	methylated (>=50%)	Q961D9	Protein BCL9 homolog (Protein legless)	canonical Wnt signaling pathway [GO:0060070]; chitin-based larval cuticle pattern formation [GO:0035293]; imaginal disc-derived wing margin morphogenesis [GO:0008587]; leg disc pattern formation [GO:0035223]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; segment polarity determination [GO:0007367]; sternite morphogenesis [GO:0007491]	hit with GO BP
GN009198	Chromosome_4A	468	2	6	40.17094017094017	0.3207310108509423	0.33222591362126247	6	0	0.4032258064516129	5	0	0	1	0	0.5458799064205875	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009199	Chromosome_4A	399	1	26	39.849624060150376	1.6466666666666667	0.5714285714285714	15	0	0.5714285714285714	15	0	NA	NA	NA	0.5925250683682771	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009200	Chromosome_4A	3492	8	93	35.967926689576174	0.8241283053342131	1.0015240583496625	92	0	0.9855072463768116	41	0	1.0111576011157601	51	0	0.5693371289141927	33	0	unmethylated (<10%)	Q7PD79	Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein)	adenylate cyclase-activating dopamine receptor signaling pathway [GO:0007191]; sensory perception of chemical stimulus [GO:0007606]	hit with GO BP
GN009201	Chromosome_4A	5878	14	144	35.69241238516502	0.7692039258451472	0.7579933847850056	143	0	0.736235595390525	70	0	0.7744433688286544	73	0	0.5369127516778524	43	0	unmethylated (<10%)	Q7PD79	Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein)	adenylate cyclase-activating dopamine receptor signaling pathway [GO:0007191]; sensory perception of chemical stimulus [GO:0007606]	hit with GO BP
GN009202	Chromosome_4A	477	1	6	39.41299790356394	0.32926829268292684	0.4291845493562232	6	0	0.4291845493562232	6	0	NA	NA	NA	0.5369127516778524	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009203	Chromosome_4A	342	1	6	44.15204678362573	0.4105642256902761	1.0050251256281406	6	0	1.0050251256281406	6	0	NA	NA	NA	0.5602240896358543	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009204	Chromosome_4A	954	2	39	39.937106918238996	1.0260893546607832	0.4878048780487805	39	0	0.6306306306306306	33	0	0	6	0	0.4706734250543085	48	0	unmethylated (<10%)	O16118	Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein)	adenylate cyclase-activating dopamine receptor signaling pathway [GO:0007191]; sensory perception of chemical stimulus [GO:0007606]	hit with GO BP
GN009205	Chromosome_4A	1077	1	14	37.79015784586815	0.3742367833209233	89.47368421052632	3	1	89.47368421052632	3	1	NA	NA	NA	80.08658008658008	3	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009206	Chromosome_4A	19077	10	252	36.2163862242491	0.40393770454612293	87.04189279834137	249	0.9357429718875502	92.96254256526674	14	1	86.70576105168192	235	0.9319148936170213	89.79157805189281	38	1	methylated (>=50%)	Q67ER4	E3 ubiquitin-protein ligase RNF113A (EC 2.3.2.27) (RING finger protein 113A) (Zinc finger protein 183)	mRNA splicing, via spliceosome [GO:0000398]; negative regulation of chemokine-mediated signaling pathway [GO:0070100]; protein ubiquitination [GO:0016567]	hit with GO BP
GN009207	Chromosome_4A	1719	1	67	45.20069808027923	0.7638682548946782	0.5607476635514018	67	0	0.5607476635514018	67	0	NA	NA	NA	0.363901018922853	56	0	unmethylated (<10%)	Q1LUQ4	Major facilitator superfamily domain-containing protein 6-A (Macrophage MHC class I receptor 2 homolog A)	antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]	hit with GO BP
GN009208	Chromosome_4A	7049	7	212	38.53028798411122	0.8118144285093437	0.6185085774302719	212	0	0.2824858757062147	22	0	0.6487724208116016	190	0	0.3367003367003367	20	0	unmethylated (<10%)	Q8CBH5	Major facilitator superfamily domain-containing protein 6 (Macrophage MHC class I receptor 2)	antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]	hit with GO BP
GN009209	Chromosome_4A	18878	5	329	35.04608539040152	0.5680603249384573	89.11464364669965	266	0.9323308270676691	50.14299332697807	21	0.42857142857142855	91.39227812134381	245	0.9755102040816327	0.6747638326585695	40	0	methylated (>=50%)	Q20655	14-3-3-like protein 2	dauer larval development [GO:0040024]; intracellular protein localization [GO:0008104]; maintenance of protein location in nucleus [GO:0051457]; negative regulation of gene expression [GO:0010629]; negative regulation of protein import into nucleus [GO:0042308]; regulation of gene expression [GO:0010468]	hit with GO BP
GN009210	Chromosome_4A	372	1	14	48.655913978494624	0.6368305209097579	0.6600660066006601	14	0	0.6600660066006601	14	0	NA	NA	NA	0.3831417624521073	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009211	Chromosome_4A	24091	14	385	35.37420613507119	0.5123029008331146	89.34999256284397	379	0.9868073878627969	95.04168494953927	42	0.9761904761904762	88.82297972616097	337	0.9881305637982196	90.34978138663335	46	1	methylated (>=50%)	Q3L1C9	Double-stranded RNA-binding protein Staufen homolog	anterograde dendritic transport of messenger ribonucleoprotein complex [GO:0098964]; germ cell development [GO:0007281]; intracellular mRNA localization [GO:0008298]; protein localization to synapse [GO:0035418]; regulation of protein localization [GO:0032880]	hit with GO BP
GN009212	Chromosome_4A	5393	8	77	34.19247172260337	0.49419183774990094	83.8177874186551	74	0.8648648648648649	79.04059040590406	26	0.8461538461538461	85.80645161290323	48	0.875	50.07507507507508	49	0.6326530612244898	methylated (>=50%)	Q8IX29	F-box only protein 16	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN009213	Chromosome_4A	7616	4	233	39.08876050420168	0.8009171247777146	0.6278538812785388	233	0	0.4048582995951417	34	0	0.6644518272425249	199	0	0.622975330176925	50	0	unmethylated (<10%)	P02597	Calmodulin, striated muscle	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN009214	Chromosome_4A	1242	1	53	43.15619967793881	0.9186518735608122	0.7672634271099744	53	0	0.7672634271099744	53	0	NA	NA	NA	0.7918552036199095	55	0	unmethylated (<10%)	Q61212	Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic polypeptide receptor 2) (PP2)	NA	hit, no GO BP
GN009215	Chromosome_4A	5318	7	132	36.53629183903723	0.7451262618221189	1.3305876762236655	131	0	1.1104256631708822	33	0	1.4066496163682864	98	0	0.2079002079002079	40	0	unmethylated (<10%)	Q53T59	HCLS1-binding protein 3 (HS1-binding protein 3) (HSP1BP-3)	regulation of apoptotic process [GO:0042981]	hit with GO BP
GN009216	Chromosome_4A	5767	3	155	41.33865094503208	0.6484814585890594	0.5387931034482759	94	0	0.6357856494096276	65	0	0.47534165181224003	29	0	0.6770680011775095	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009217	Chromosome_4A	7952	3	231	43.80030181086519	0.6363768640118399	0.7505518763796909	134	0	0.7864488808227466	113	0	0.6535947712418301	21	0	0.20080321285140562	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009218	Chromosome_4A	4362	1	126	44.56671251719395	0.613748743718593	0.6993006993006993	57	0	0.6993006993006993	57	0	NA	NA	NA	0.944386149003148	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009219	Chromosome_4A	3852	1	111	44.13291796469367	0.6264791208791208	0.9906759906759907	92	0	0.9906759906759907	92	0	NA	NA	NA	0.8443908323281062	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009220	Chromosome_4A	2407	2	65	44.12131283755713	0.5868859838325488	0.6952491309385863	49	0	0.7471980074719801	47	0	0	2	0	0.9051929490233445	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009221	Chromosome_4A	870	1	17	43.333333333333336	0.4324561403508772	0	6	0	0	6	0	NA	NA	NA	0.46403712296983757	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009222	Chromosome_4A	2088	4	51	43.82183908045977	0.5276280323450134	1.0101010101010102	7	0	1.2658227848101267	5	0	0	2	0	0.2457002457002457	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009223	Chromosome_4A	873	1	20	43.75715922107675	0.4933318264014466	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0101010101010102	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009224	Chromosome_4A	726	1	21	47.107438016528924	0.5531930333817127	5.2631578947368425	2	0	5.2631578947368425	2	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009225	Chromosome_4A	873	1	20	43.8717067583047	0.4930532023043036	NA	0	NA	NA	NA	NA	NA	NA	NA	5.2631578947368425	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009226	Chromosome_4A	3236	5	74	43.66501854140915	0.4997996326598764	NA	0	NA	NA	NA	NA	NA	NA	NA	5.2631578947368425	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009227	Chromosome_4A	873	1	18	43.06987399770905	0.4625165562913907	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009228	Chromosome_4A	873	1	18	43.75715922107675	0.44318470259751247	NA	0	NA	NA	NA	NA	NA	NA	NA	0	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009229	Chromosome_4A	873	1	21	43.8717067583047	0.5177058624195188	NA	0	NA	NA	NA	NA	NA	NA	NA	0	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009230	Chromosome_4A	873	1	21	43.986254295532646	0.5154352226720648	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009231	Chromosome_4A	873	1	21	43.8717067583047	0.5177058624195188	5	2	0	5	2	0	NA	NA	NA	0.7246376811594203	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009232	Chromosome_4A	873	1	21	43.8717067583047	0.5177058624195188	NA	0	NA	NA	NA	NA	NA	NA	NA	1.2658227848101267	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009233	Chromosome_4A	873	1	19	43.6426116838488	0.4744836661136221	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009234	Chromosome_4A	3236	6	72	43.63411619283065	0.48546068258532316	0	1	0	NA	NA	NA	0	1	0	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009235	Chromosome_4A	873	1	20	43.75715922107675	0.4952348536419333	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009236	Chromosome_4A	873	1	21	43.8717067583047	0.5177058624195188	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009237	Chromosome_4A	873	1	21	43.8717067583047	0.5177058624195188	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009238	Chromosome_4A	49433	54	777	39.044767665324784	0.4146918689843972	64.68295968440296	436	0.7041284403669725	66.87348260048557	192	0.6510416666666666	63.46844151959318	244	0.7459016393442623	0	1	0	methylated (>=50%)	B3EWY9	Mucin-like protein	cell-matrix adhesion [GO:0007160]	hit with GO BP
GN009239	Chromosome_4A	798	1	41	45.48872180451128	0.9953757225433526	1.6304347826086956	41	0	1.6304347826086956	41	0	NA	NA	NA	0.4196642685851319	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009240	Chromosome_4A	17851	7	294	36.20525460758501	0.5056140546262651	78.9226448812867	294	0.9013605442176871	94.61827284105131	49	0.9795918367346939	76.73376774493833	245	0.8857142857142857	37.50905141202028	31	0.1935483870967742	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009241	Chromosome_4A	4004	4	152	38.63636363636363	1.0172594194710856	0.7434330084255741	152	0	0.2564102564102564	12	0	0.776973335687798	140	0	0.8620689655172413	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009242	Chromosome_4A	888	1	33	44.48198198198198	0.7516544400554045	3.600654664484452	32	0	3.600654664484452	32	0	NA	NA	NA	0.5194805194805194	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009243	Chromosome_4A	1550	3	47	37.354838709677416	0.8692280157499105	0.39781203381402286	47	0	0.8042895442359249	11	0	0.3052503052503053	36	0	0.6292134831460674	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009244	Chromosome_4A	1750	3	35	33.82857142857143	0.7073401699926091	0.6649616368286445	35	0	0.8912655971479501	12	0	0.5738880918220947	23	0	0.45610034207525657	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009245	Chromosome_4A	1467	3	50	37.55964553510566	0.9665559772296015	0.4155124653739612	50	0	0.6651884700665188	13	0	0.3498542274052478	37	0	0.9131450414100658	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009246	Chromosome_4A	2171	2	83	43.251957623215105	0.8180402589502166	1.1671529804085035	83	0	0.2932551319648094	8	0	1.3119533527696794	75	0	0.2594033722438392	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009247	Chromosome_4A	225	1	21	50.666666666666664	1.4705882352941178	0.8547008547008547	19	0	0.8547008547008547	19	0	NA	NA	NA	0.48525569242254574	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009248	Chromosome_4A	6112	8	166	36.69829842931937	0.8075197185676878	0.6742330598943701	166	0	0.6989951944080385	42	0	0.6656580937972768	124	0	0.730816077953715	51	0	unmethylated (<10%)	Q09621	Beta-lactamase domain-containing protein 2	NA	hit, no GO BP
GN009249	Chromosome_4A	11949	7	297	35.75194576952046	0.778667745012941	1.3882635449497223	269	0	1.8796992481203008	56	0	1.30844382414515	213	0	0.4244031830238727	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009250	Chromosome_4A	3017	5	116	44.912164401723565	0.7913693141218716	0.823045267489712	113	0	0.8362369337979094	103	0	0.7518796992481203	10	0	1.33385641428011	42	0	unmethylated (<10%)	Q9ZQ47	Glycine-rich domain-containing protein 1 (AtGRDP1)	cellular response to osmotic stress [GO:0071470]; regulation of abscisic acid-activated signaling pathway [GO:0009787]; response to osmotic stress [GO:0006970]	hit with GO BP
GN009251	Chromosome_4A	4705	4	96	34.41020191285866	0.6903276488694754	77.96068403388205	96	0.8541666666666666	55.604075691411936	11	0.7272727272727273	80.7181328545781	85	0.8705882352941177	1.5144344533838145	44	0	methylated (>=50%)	Q7Z7K0	COX assembly mitochondrial protein homolog (Cmc1p)	mitochondrial respiratory chain complex IV assembly [GO:0033617]	hit with GO BP
GN009252	Chromosome_4A	7517	6	98	35.85206864440601	0.40607436349164	78.71827818824285	98	0.8775510204081632	85.44542032622334	21	0.9523809523809523	77.73070547062073	77	0.8571428571428571	0.4945054945054945	82	0	methylated (>=50%)	Q17QJ7	Pyrroline-5-carboxylate reductase 2 (P5C reductase 2) (P5CR 2) (EC 1.5.1.2)	cellular response to oxidative stress [GO:0034599]; L-proline biosynthetic process [GO:0055129]	hit with GO BP
GN009253	Chromosome_4A	3951	5	122	36.34522905593521	0.9364378132649493	0.8882572392965002	122	0	0.9846827133479212	31	0	0.8695652173913043	91	0	0.5366726296958855	42	0	unmethylated (<10%)	Q58DT4	Pyrroline-5-carboxylate reductase 1, mitochondrial (P5C reductase 1) (P5CR 1) (EC 1.5.1.2)	cellular response to oxidative stress [GO:0034599]; L-glutamate catabolic process [GO:0006538]; L-glutamine catabolic process [GO:0006543]; L-proline biosynthetic process [GO:0055129]; negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway [GO:1903377]; regulation of mitochondrial membrane potential [GO:0051881]	hit with GO BP
GN009254	Chromosome_4A	1567	4	48	40.52329291640076	0.74816479996817	NA	0	NA	NA	NA	NA	NA	NA	NA	2.807017543859649	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009255	Chromosome_4A	2021	3	65	36.961900049480455	0.9429012345679012	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009256	Chromosome_4A	5840	4	62	35.54794520547945	0.3363742776982962	NA	0	NA	NA	NA	NA	NA	NA	NA	6.410256410256411	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009257	Chromosome_4A	1204	3	29	40.4485049833887	0.5891802504134184	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009258	Chromosome_4A	1575	2	33	38.095238095238095	0.5869167532408871	NA	0	NA	NA	NA	NA	NA	NA	NA	14.912280701754385	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009259	Chromosome_4A	1406	2	25	38.12233285917497	0.5230654761904762	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009260	Chromosome_4A	1204	2	29	40.4485049833887	0.5891802504134184	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009261	Chromosome_4A	759	1	42	49.143610013175234	0.916561242093157	1.2684989429175475	42	0	1.2684989429175475	42	0	NA	NA	NA	1.205895489057615	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009262	Chromosome_4A	19923	10	347	34.98971038498218	0.5702339109511144	92.41003695779031	344	1	96.04694255713403	67	1	91.88587706413851	277	1	48.73498594428827	60	0.55	methylated (>=50%)	Q4KMD7	Speckle targeted PIP5K1A-regulated poly(A) polymerase (Star-PAP) (EC 2.7.7.19) (RNA-binding motif protein 21) (RNA-binding protein 21) (U6 snRNA-specific terminal uridylyltransferase 1) (U6-TUTase) (EC 2.7.7.52)	co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway [GO:0180010]; polyuridylation-dependent mRNA catabolic process [GO:1990074]; snRNA processing [GO:0016180]	hit with GO BP
GN009263	Chromosome_4A	31760	13	890	36.445214105793454	0.8439999813681265	1.5821463369368534	878	0	0.9457236842105263	67	0	1.6201996361311894	811	0	0.27453671928620454	76	0	unmethylated (<10%)	Q86YT5	Na(+)/citrate cotransporter (NaCT) (Sodium-coupled citrate transporter) (Sodium-dependent citrate transporter) (Solute carrier family 13 member 5)	alpha-ketoglutarate transport [GO:0015742]; cellular response to lithium ion [GO:0071285]; citrate transport [GO:0015746]; fumarate transport [GO:0015741]; oxaloacetate transport [GO:0015729]; succinate transport [GO:0015744]; transmembrane transport [GO:0055085]	hit with GO BP
GN009264	Chromosome_4A	750	3	25	37.6	0.968892104175279	0.547945205479452	25	0	0.5181347150259067	18	0	0.6191950464396285	7	0	0.2881844380403458	83	0	unmethylated (<10%)	Q91Y63	Na(+)/dicarboxylate cotransporter 3 (NaDC-3) (mNaDC3) (Na(+)-coupled carboxylate transporter 3) (NaC3) (Sodium-dependent high-affinity dicarboxylate transporter 2) (Solute carrier family 13 member 3)	aspartate transmembrane transport [GO:0015810]; carboxylic acid transport [GO:0046942]; citrate transport [GO:0015746]; dicarboxylic acid transport [GO:0006835]; glutathione transmembrane transport [GO:0034775]; succinate transmembrane transport [GO:0071422]; succinate transport [GO:0015744]	hit with GO BP
GN009265	Chromosome_4A	195	1	7	53.84615384615385	0.5158730158730159	0	7	0	0	7	0	NA	NA	NA	4.858125537403267	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009266	Chromosome_4A	1721	2	40	43.927948866937825	0.4846419746133213	50.57747834456208	40	0.55	70.60027285129604	32	0.6875	2.6143790849673203	8	0	1.1632571199358204	37	0	methylated (>=50%)	O95429	BAG family molecular chaperone regulator 4 (BAG-4) (Bcl-2-associated athanogene 4) (Silencer of death domains)	cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to tumor necrosis factor [GO:0071356]; negative regulation of apoptotic process [GO:0043066]; negative regulation of protein localization to mitochondrion [GO:1903748]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of cell adhesion [GO:0045785]; positive regulation of fibroblast migration [GO:0010763]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of stress fiber assembly [GO:0051496]; protein folding [GO:0006457]; protein localization to plasma membrane [GO:0072659]; protein stabilization [GO:0050821]; ruffle assembly [GO:0097178]	hit with GO BP
GN009267	Chromosome_4A	32850	21	506	35.29680365296804	0.494641112684055	82.17533432392274	502	0.9402390438247012	93.37899543378995	57	1	81.22622654890078	445	0.9325842696629213	95.14925373134328	43	1	methylated (>=50%)	P52034	ATP-dependent 6-phosphofructokinase (ATP-PFK) (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)	canonical glycolysis [GO:0061621]; fructose 1,6-bisphosphate metabolic process [GO:0030388]; fructose 6-phosphate metabolic process [GO:0006002]; glucose homeostasis [GO:0042593]; glycolytic process [GO:0006096]; response to sucrose [GO:0009744]	hit with GO BP
GN009268	Chromosome_4A	288	1	0	61.111111111111114	0	NA	0	NA	NA	NA	NA	NA	NA	NA	85.92814371257485	22	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009269	Chromosome_4A	1618	5	33	37.14462299134734	0.6039498687901548	68.88346552776083	32	0.6875	86.5520728008089	22	0.8636363636363636	42	10	0.3	37.113127001067234	59	0.3898305084745763	methylated (>=50%)	Q3T0W9	Large ribosomal subunit protein eL19 (60S ribosomal protein L19)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN009270	Chromosome_4A	8692	15	125	37.264150943396224	0.41452726341805485	85.50045358330813	122	0.9180327868852459	81.59278737791135	27	0.8518518518518519	86.48495173197047	95	0.9368421052631579	70.71531445031205	41	0.6341463414634146	methylated (>=50%)	Q96D46	60S ribosomal export protein NMD3 (hNMD3)	positive regulation of protein localization to nucleolus [GO:1904751]; positive regulation of RNA biosynthetic process [GO:1902680]; ribosomal large subunit export from nucleus [GO:0000055]	hit with GO BP
GN009271	Chromosome_4A	8442	5	138	35.00355366027008	0.5345921300426206	90.67841178017355	138	1	93.51949420442571	87	1	87.8477690288714	51	1	92.90836653386454	19	1	methylated (>=50%)	P17012	Zinc finger X-chromosomal protein	fertilization [GO:0009566]; germ cell development [GO:0007281]; homeostasis of number of cells [GO:0048872]; multicellular organism growth [GO:0035264]; oocyte development [GO:0048599]; ovarian follicle development [GO:0001541]; parental behavior [GO:0060746]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-embryonic development [GO:0009791]; regulation of transcription by RNA polymerase II [GO:0006357]; spermatogenesis [GO:0007283]	hit with GO BP
GN009272	Chromosome_4A	5909	6	40	34.13437129801997	0.23343828640732592	79.23627684964201	38	0.9210526315789473	63.333333333333336	3	0.6666666666666666	80.68576388888889	35	0.9428571428571428	82.60661236224246	40	0.925	methylated (>=50%)	E7E2N8	Gamma-interferon-inducible lysosomal thiol reductase (EC 1.8.4.-)	antigen processing and presentation [GO:0019882]	hit with GO BP
GN009273	Chromosome_4A	267	1	11	52.80898876404494	0.65150842945874	76	11	0.9090909090909091	76	11	0.9090909090909091	NA	NA	NA	85.65365025466893	33	0.9696969696969697	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009274	Chromosome_4A	4932	9	80	37.93592862935929	0.45138793553169876	83.67139959432049	80	0.9375	84.95454545454545	46	0.9565217391304348	82.63736263736264	34	0.9117647058823529	3.7698412698412698	29	0	methylated (>=50%)	Q5NUA6	Nuclear factor erythroid 2-related factor 2 (NF-E2-related factor 2) (NFE2-related factor 2) (Nuclear factor, erythroid derived 2, like 2)	cell redox homeostasis [GO:0045454]; cellular response to fluid shear stress [GO:0071498]; cellular response to oxidative stress [GO:0034599]; negative regulation of ferroptosis [GO:0110076]; positive regulation of transcription by RNA polymerase II [GO:0045944]; proteasomal ubiquitin-independent protein catabolic process [GO:0010499]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of innate immune response [GO:0045088]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009275	Chromosome_4A	7643	12	157	37.66845479523747	0.5959960344777918	73.7230846269404	157	0.7643312101910829	79.69072164948453	66	0.7727272727272727	70.3032690035447	91	0.7582417582417582	0.7397737162750218	53	0	methylated (>=50%)	Q9FFU6	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 (Protein b561A.tha1)	NA	hit, no GO BP
GN009276	Chromosome_4A	37110	31	454	35.173807599029914	0.3984856168128984	75.64664130191514	443	0.9164785553047404	78.6746490503716	83	0.9397590361445783	75.09174138387621	360	0.9111111111111111	30.690537084398976	23	0.21739130434782608	methylated (>=50%)	Q0P5X1	Leucine-rich repeat- and IQ domain-containing protein 1	apoptotic process [GO:0006915]; gene expression [GO:0010467]; single fertilization [GO:0007338]	hit with GO BP
GN009277	Chromosome_4A	11410	5	377	36.59947414548642	0.987897391708549	1.085726047133889	377	0	0.8278867102396514	45	0	1.1202520567127603	332	0	0.3476749239461104	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009278	Chromosome_4A	249	1	9	42.570281124497996	0.7980769230769231	0	9	0	0	9	0	NA	NA	NA	1.592797783933518	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009279	Chromosome_4A	1298	6	49	39.676425269645605	0.9598273572377158	0.4235493434985176	49	0	0.42036431574030825	45	0	0.45454545454545453	4	0	0.3897550111358575	55	0	unmethylated (<10%)	P78545	ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)	cell differentiation [GO:0030154]; inflammatory response [GO:0006954]; mammary gland involution [GO:0060056]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009280	Chromosome_4A	6918	4	249	38.060132986412256	0.9941548210606507	0.5715374357020385	249	0	0.587820362097343	132	0	0.5604483586869495	117	0	0.4728789986091794	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009281	Chromosome_4A	589	2	22	42.95415959252971	0.8097737782777152	0.6410256410256411	22	0	0.6410256410256411	22	0	NA	NA	NA	0.35398230088495575	45	0	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN009282	Chromosome_4A	14772	13	238	34.80909829406986	0.5318793801838874	0.8472071717072209	236	0	0.7714915503306392	71	0	0.8749495221429533	165	0	1.307639366827254	35	0	unmethylated (<10%)	Q5XGP7	Src kinase-associated phosphoprotein 2-A	NA	hit, no GO BP
GN009283	Chromosome_4A	12418	9	317	35.971976163633435	0.7907780931198293	0.6900058105752469	293	0	0.6480218281036835	62	0	0.7013658176448874	231	0	0.7075471698113207	50	0	unmethylated (<10%)	Q9I8C7	Neuronal acetylcholine receptor subunit alpha-10 (Alpha 10 nAChR) (Nicotinic acetylcholine receptor subunit alpha-10) (NACHR alpha-10)	calcium ion transport [GO:0006816]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN009284	Chromosome_4A	1851	5	55	40.62668827660724	0.7283439217032966	0.5847953216374269	54	0	0.6274509803921569	42	0	0.45977011494252873	12	0	3.6059806508355323	65	0	unmethylated (<10%)	Q6EV56	GDP-fucose protein O-fucosyltransferase 2 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 2) (O-FucT-2)	protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN009285	Chromosome_4A	10044	9	155	35.68299482277977	0.48702020851379724	81.23579251911552	152	0.8881578947368421	73.71037911746426	30	0.7666666666666667	82.7363985623993	122	0.9180327868852459	0.5252100840336135	33	0	methylated (>=50%)	Q9Y2G5	GDP-fucose protein O-fucosyltransferase 2 (EC 2.4.1.221) (Peptide-O-fucosyltransferase 2) (O-FucT-2)	positive regulation of protein folding [GO:1903334]; protein O-linked glycosylation via fucose [GO:0036066]; regulation of secretion [GO:0051046]	hit with GO BP
GN009286	Chromosome_4A	24963	16	256	34.751432119536915	0.3439800075314094	85.98291687914329	255	0.9686274509803922	90.5389685924777	45	0.9555555555555556	85.08658173773743	210	0.9714285714285714	44.95509772847332	30	0.3333333333333333	methylated (>=50%)	Q8K0Q5	Rho GTPase-activating protein 18 (Rho-type GTPase-activating protein 18)	regulation of actin cytoskeleton organization [GO:0032956]; regulation of actin filament polymerization [GO:0030833]; regulation of cell motility [GO:2000145]; regulation of cell shape [GO:0008360]; regulation of small GTPase mediated signal transduction [GO:0051056]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN009287	Chromosome_4A	4221	4	126	36.93437574034589	0.8752937691320233	0.9702850212249848	126	0	0	4	0	1.0037641154328734	122	0	0.4457652303120357	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009288	Chromosome_4A	16790	15	433	35.51518761167362	0.8183799385151557	1.6832129963898916	421	0	1.1490866234531527	80	0	1.779814558243632	341	0	0.5136309758988542	42	0	unmethylated (<10%)	Q6Q4G4	Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) (TtACE)	proteolysis [GO:0006508]	hit with GO BP
GN009289	Chromosome_4A	2967	3	74	39.130434782608695	0.6587003480139205	67.55852842809365	74	0.7567567567567568	83.30049261083744	49	0.8979591836734694	50.350026925148086	25	0.48	3.8100997883277894	42	0	methylated (>=50%)	P59326	YTH domain-containing family protein 1 (Dermatomyositis associated with cancer putative autoantigen 1 homolog) (DACA-1 homolog)	learning [GO:0007612]; memory [GO:0007613]; mRNA destabilization [GO:0061157]; organelle assembly [GO:0070925]; positive regulation of translation [GO:0045727]; positive regulation of translational initiation [GO:0045948]; regulation of antigen processing and presentation [GO:0002577]; regulation of axon guidance [GO:1902667]; regulation of long-term synaptic potentiation [GO:1900271]; regulation of mRNA stability [GO:0043488]; stress granule assembly [GO:0034063]	hit with GO BP
GN009290	Chromosome_4A	12819	8	148	35.361572665574535	0.3696300527672203	87.34669095324833	146	0.9863013698630136	87.49673714434873	80	0.975	87.21616712079927	66	1	5.546995377503852	40	0.05	methylated (>=50%)	P57071	PR domain zinc finger protein 15 (EC 2.1.1.-) (PR domain-containing protein 15) (Zinc finger protein 298)	negative regulation of MAPK cascade [GO:0043409]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of stem cell division [GO:2000035]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009291	Chromosome_4A	6038	7	72	35.044716793640276	0.39102172612756847	71.41168124852211	71	0.7605633802816901	73.35329341317366	11	0.9090909090909091	71.04745857905083	60	0.7333333333333333	52.24625623960067	37	0.5945945945945946	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009292	Chromosome_4A	3230	4	27	32.29102167182663	0.3243430203583728	85.83333333333333	26	0.8846153846153846	88.45528455284553	11	0.9090909090909091	84.31924882629107	15	0.8666666666666667	76.87420584498093	15	0.8666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009293	Chromosome_4A	6200	10	75	35.67741935483871	0.3818953672396192	89.05424867978877	75	1	89.51612903225806	14	1	88.97349125775521	61	1	85.87650816181689	39	0.9743589743589743	methylated (>=50%)	Q6P0I8	Exosome complex component MTR3 (Exosome component 6) (mRNA transport regulator 3 homolog)	nuclear mRNA surveillance [GO:0071028]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; rRNA catabolic process [GO:0016075]; U4 snRNA 3'-end processing [GO:0034475]	hit with GO BP
GN009294	Chromosome_4A	12103	6	113	35.660580021482275	0.30605481617541747	75.79681274900399	112	0.8035714285714286	77.84037558685446	20	0.8	75.2465233881163	92	0.8043478260869565	55.91070522577372	45	0.6444444444444445	methylated (>=50%)	Q8N3Y7	Epidermal retinol dehydrogenase 2 (EPHD-2) (RDH-E2) (EC 1.1.1.105) (Retinal short-chain dehydrogenase reductase 2) (retSDR2) (Short-chain dehydrogenase/reductase family 16C member 5)	keratinocyte proliferation [GO:0043616]; negative regulation of gene expression, epigenetic [GO:0045814]; negative regulation of transcription by RNA polymerase II [GO:0000122]; retinal metabolic process [GO:0042574]; retinol metabolic process [GO:0042572]	hit with GO BP
GN009295	Chromosome_4A	8482	3	171	33.35298278707852	0.7249217562192685	75.84818861414607	171	0.8888888888888888	78.03425167535369	20	0.85	75.61460736733233	151	0.8940397350993378	42.76803118908382	48	0.375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009296	Chromosome_4A	6346	8	85	35.62874251497006	0.42243450585320164	92.76779987171264	82	0.975609756097561	92.40506329113924	9	1	92.79763970843457	73	0.9726027397260274	93.51166761525327	21	1	methylated (>=50%)	Q15428	Splicing factor 3A subunit 2 (SF3a66) (Spliceosome-associated protein 62) (SAP 62)	mRNA 3'-splice site recognition [GO:0000389]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of neuron projection development [GO:0010976]; spliceosomal complex assembly [GO:0000245]; spliceosomal snRNP assembly [GO:0000387]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN009297	Chromosome_4A	492	1	15	49.390243902439025	0.5009503122454521	69.47368421052632	15	0.8666666666666667	69.47368421052632	15	0.8666666666666667	NA	NA	NA	60.407725321888414	19	0.7368421052631579	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009298	Chromosome_4A	10082	8	302	37.37353699662766	0.8579748533298768	1.0337698139214335	302	0	0.7362608466999737	89	0	1.1394414868777436	213	0	0.4811250925240563	52	0	unmethylated (<10%)	B7Z0W9	Proton channel OtopLc (Otopetrin-Lc) (DmOtopLc)	proton transmembrane transport [GO:1902600]	hit with GO BP
GN009299	Chromosome_4A	4591	3	106	36.615116532345894	0.689839647996734	3.5936850851682594	106	0	2.0222446916076846	31	0	4	75	0	0.47307132459970885	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009300	Chromosome_4A	921	1	40	43.105320304017376	0.9440828250730358	0.46403712296983757	40	0	0.46403712296983757	40	0	NA	NA	NA	1.0447137484329294	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009301	Chromosome_4A	5777	6	135	34.03150424095551	0.8071241399865875	1.0293935259828848	135	0	1.4834205933682374	25	0	0.9541708833309238	110	0	0.32419687592101387	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009302	Chromosome_4A	2477	2	46	33.42753330641906	0.6648500408449061	2.443220922229869	46	0	2.2929936305732483	19	0	2.498821310702499	27	0	1.607445008460237	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009303	Chromosome_4A	786	1	14	39.82188295165395	0.4500613496932515	0.9009009009009009	14	0	0.9009009009009009	14	0	NA	NA	NA	0.5806010928961749	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009304	Chromosome_4A	714	1	19	47.47899159663866	0.47616707616707615	0	12	0	0	12	0	NA	NA	NA	0.6140350877192983	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009305	Chromosome_4A	6107	5	169	37.31783199607008	0.7987393006949711	0.5093378607809848	169	0	0.6058507876060238	138	0	0.2127659574468085	31	0	0.460617227084293	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009306	Chromosome_4A	894	1	13	37.24832214765101	0.42123957955781083	0.3766478342749529	13	0	0.3766478342749529	13	0	NA	NA	NA	0.3201280512204882	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009307	Chromosome_4A	348	1	13	48.275862068965516	0.6486021505376344	0	13	0	0	13	0	NA	NA	NA	0.8395061728395061	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009308	Chromosome_4A	1250	2	28	43.44	0.4898119122257053	0.43859649122807015	28	0	0.40160642570281124	23	0	0.6060606060606061	5	0	0.6054490413723511	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009309	Chromosome_4A	1076	4	18	38.19702602230483	0.4652414124429498	0.697350069735007	18	0	0.3389830508474576	15	0	2.3622047244094486	3	0	0.9821659343499612	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009310	Chromosome_4A	6430	10	93	33.32814930015552	0.524672293681015	1.8135449135732502	93	0	1.9396551724137931	54	0	1.6308119361554476	39	0	0.46296296296296297	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009311	Chromosome_4A	459	1	5	38.3442265795207	0.30522675887751033	0	5	0	0	5	0	NA	NA	NA	0.8333333333333334	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009312	Chromosome_4A	279	2	8	37.634408602150536	0.8372093023255814	0.9933774834437086	8	0	1.1494252873563218	7	0	0	1	0	0.77007700770077	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009313	Chromosome_4A	2655	4	76	37.40112994350282	0.8261004847373248	0.7102693104468778	76	0	0.48959608323133413	18	0	0.78064012490242	58	0	0.4819277108433735	36	0	unmethylated (<10%)	P46197	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN009314	Chromosome_4A	679	3	13	34.609720176730484	0.6594202898550725	0.21929824561403508	13	0	0	5	0	0.35714285714285715	8	0	1.9309537741369223	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009315	Chromosome_4A	2471	4	24	32.861189801699716	0.3648758398346172	8.004926108374384	24	0	7.8416728902165795	20	0	8.771929824561404	4	0	0.9836065573770492	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009316	Chromosome_4A	480	1	19	42.5	0.8765859284890427	0.9560229445506692	19	0	0.9560229445506692	19	0	NA	NA	NA	0.3778932451582428	68	0	unmethylated (<10%)	A7UXI1	Carotenoid dioxygenase (EC 1.13.11.59)	NA	hit, no GO BP
GN009317	Chromosome_4A	696	1	30	41.37931034482759	1.0071387227474435	0.43103448275862066	30	0	0.43103448275862066	30	0	NA	NA	NA	0.36585365853658536	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009318	Chromosome_4A	617	2	3	28.52512155591572	0.2391472868217054	7.441860465116279	3	0	7.441860465116279	3	0	NA	NA	NA	0.39382005452893065	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009319	Chromosome_4A	2224	4	26	33.58812949640288	0.4147170623251811	86.27118644067797	24	0.9166666666666666	75.75757575757575	8	0.75	89.30131004366812	16	1	27.678571428571427	22	0.18181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009320	Chromosome_4A	1263	1	45	47.90182106096596	0.7382511105915361	0.546448087431694	19	0	0.546448087431694	19	0	NA	NA	NA	3.5320926699582227	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009321	Chromosome_4A	1074	1	49	41.154562383612664	1.0792863002461033	0.35294117647058826	48	0	0.35294117647058826	48	0	NA	NA	NA	0.3835939805252287	62	0	unmethylated (<10%)	Q91XT5	Beta,beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) (Beta-carotene dioxygenase 1) (Beta-carotene oxygenase 1)	beta-carotene metabolic process [GO:1901810]; carotene catabolic process [GO:0016121]; retinal metabolic process [GO:0042574]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]	hit with GO BP
GN009322	Chromosome_4A	2982	3	100	41.91817572099262	0.7873392053735505	0.33393269971744155	100	0	0.27472527472527475	47	0	0.3693065244152647	53	0	0.9006304413089162	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009323	Chromosome_4A	375	1	5	38.4	0.3887621812150114	3.2710280373831777	5	0	3.2710280373831777	5	0	NA	NA	NA	4.37956204379562	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009324	Chromosome_4A	46609	42	727	35.91581025123903	0.4866183393618601	88.43286406297305	719	0.9680111265646731	89.17568692756036	120	0.9416666666666667	88.31558652118663	599	0.9732888146911519	39.64705882352941	34	0.47058823529411764	methylated (>=50%)	A6NHR9	Structural maintenance of chromosomes flexible hinge domain-containing protein 1 (SMC hinge domain-containing protein 1) (EC 3.6.1.-)	chromosome organization [GO:0051276]; dosage compensation by inactivation of X chromosome [GO:0009048]; double-strand break repair [GO:0006302]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; nose development [GO:0043584]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]	hit with GO BP
GN009325	Chromosome_4A	7740	4	217	35.671834625322994	0.8819248412138321	0.6173816685135349	216	0	0.6259027443428021	49	0	0.6157052192857819	167	0	0.7810153199158907	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009326	Chromosome_4A	1653	1	37	43.920145190562614	0.46494708994708994	96.291936433196	37	1	96.291936433196	37	1	NA	NA	NA	2.4809923969587837	44	0.022727272727272728	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003203	Chromosome_4A	465	1	7	43.225806451612904	0.32407407407407407	0	1	0	0	1	0	NA	NA	NA	3.9958304378040306	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009327	Chromosome_4A	1171	2	21	38.17250213492741	0.5090039741679085	6.075533661740558	19	0	12.149532710280374	8	0	3.9018952062430325	11	0	6.045589692765114	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009328	Chromosome_4A	1387	2	26	38.13987022350396	0.5158789196612498	1.1655011655011656	26	0	1.1226252158894645	23	0	1.550387596899225	3	0	0.38476337052712584	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009329	Chromosome_4A	570	1	6	37.89473684210526	0.34258239006310726	0.2506265664160401	6	0	0.2506265664160401	6	0	NA	NA	NA	0.5040806529044647	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009330	Chromosome_4A	1372	3	36	38.48396501457726	0.7091762746421238	0.5603985056039851	36	0	0.6295907660020986	24	0	0.45941807044410415	12	0	2.2966507177033493	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009331	Chromosome_4A	321	1	18	42.99065420560748	1.2138655462184873	0.47961630695443647	18	0	0.47961630695443647	18	0	NA	NA	NA	0.40536326785157467	40	0	unmethylated (<10%)	Q3UKC1	Tax1-binding protein 1 homolog	cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; negative regulation of apoptotic process [GO:0043066]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cytoplasmic pattern recognition receptor signaling pathway [GO:0039532]; negative regulation of interleukin-1-mediated signaling pathway [GO:2000660]; negative regulation of toll-like receptor 4 signaling pathway [GO:0034144]; negative regulation of tumor necrosis factor-mediated signaling pathway [GO:0010804]; protein K48-linked ubiquitination [GO:0070936]; protein localization to phagocytic vesicle [GO:1905161]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN009332	Chromosome_4A	2428	2	100	44.02800658978583	0.8588002263723826	0.7550018875047187	98	0	0.8538899430740038	91	0	0.36968576709796674	7	0	1.2955465587044535	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009333	Chromosome_4A	396	1	20	45.95959595959596	1.0157752981916122	0.783289817232376	20	0	0.783289817232376	20	0	NA	NA	NA	0.48479506390480387	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009334	Chromosome_4A	369	1	15	45.25745257452574	0.7961737629459148	0.28169014084507044	15	0	0.28169014084507044	15	0	NA	NA	NA	1.9951632406287787	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009335	Chromosome_4A	3642	4	99	36.847885777045576	0.8014537209922646	1.0223490252020921	99	0	0.6009013520280421	59	0	1.403349932095971	40	0	1.1445527766002543	40	0	unmethylated (<10%)	P00179	Cytochrome P450 2C5 (EC 1.14.14.1) (CYPIIC5) (Cytochrome P450 1) (Cytochrome P450IIC5) (Progesterone 21-hydroxylase)	xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN009336	Chromosome_4A	5369	6	92	36.580368783758615	0.512911358755924	76.57094594594595	92	0.9021739130434783	37.44769874476987	15	0.6	84.10556003223208	77	0.961038961038961	0.6050955414012739	63	0	methylated (>=50%)	Q08BH7	Ubiquitin-conjugating enzyme E2 T (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme T) (Ubiquitin carrier protein T) (Ubiquitin-protein ligase T)	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; protein autoubiquitination [GO:0051865]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN009337	Chromosome_4A	3858	7	51	35.38102643856921	0.4236821705426357	87.71766169154229	51	1	87.75510204081633	17	1	87.70351328191946	34	1	88.8147357180993	49	0.9795918367346939	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009338	Chromosome_4A	3792	4	80	40.664556962025316	0.5103702607033742	91.8809201623816	80	1	94.21793921423277	45	1	90.53708439897699	35	1	12.971772914684427	54	0.16666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009339	Chromosome_4A	6491	12	187	39.85518410106301	0.7315076633062864	0.4251594347880455	187	0	0.38946587537091987	135	0	0.4990403071017274	52	0	0.5629838142153413	44	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN009340	Chromosome_4A	2832	6	69	37.0409604519774	0.710321412732917	0.5938634114153745	69	0	0.3351206434316354	32	0	0.8447043534762833	37	0	0.3997093023255814	50	0	unmethylated (<10%)	P86856	Nacrein-like protein	one-carbon metabolic process [GO:0006730]	hit with GO BP
GN009341	Chromosome_4A	5060	7	154	35.88932806324111	0.9464744664208291	0.538003663003663	154	0	0.7161458333333334	30	0	0.5	124	0	0.6088992974238876	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009342	Chromosome_4A	843	3	39	44.12811387900356	0.9513020833333333	0.5120702267739575	39	0	0.6910167818361304	36	0	0	3	0	0.502706883217324	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009343	Chromosome_4A	822	1	29	44.40389294403893	0.7161569428588596	0	23	0	0	23	0	NA	NA	NA	0.6128702757916241	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009344	Chromosome_4A	1971	2	53	37.69660071029934	0.7580659206687856	1.042654028436019	53	0	0.8393285371702638	37	0	1.1755485893416928	16	0	0.507399577167019	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009345	Chromosome_4A	977	2	6	38.792221084953944	0.16395368350394363	0.3861003861003861	6	0	0.3861003861003861	6	0	NA	NA	NA	0.30175015087507545	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009346	Chromosome_4A	2016	3	16	31.89484126984127	0.31933471933471935	0	12	0	0	8	0	0	4	0	0.5260243632336655	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009347	Chromosome_4A	246	1	6	42.68292682926829	0.656	0	6	0	0	6	0	NA	NA	NA	0	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009348	Chromosome_4A	2012	3	17	32.10735586481113	0.3355702064202182	0.6993006993006993	13	0	0.5813953488372093	7	0	0.7782101167315175	6	0	0.7512520868113522	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009349	Chromosome_4A	3326	6	53	39.9579073962718	0.39925439053447426	0.7386888273314867	53	0	1.0325655281969817	31	0	0.33076074972436603	22	0	0.7478081485301702	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009350	Chromosome_4A	1002	1	25	42.01596806387226	0.5654882838954355	0	1	0	0	1	0	NA	NA	NA	12.931034482758621	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009351	Chromosome_4A	282	1	6	41.13475177304964	0.5444015444015444	17.94871794871795	3	0	17.94871794871795	3	0	NA	NA	NA	0.9793253536452666	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009352	Chromosome_4A	222	1	6	42.34234234234234	0.6129774505292223	0.9025270758122743	6	0	0.9025270758122743	6	0	NA	NA	NA	0.44039929536112743	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009353	Chromosome_4A	2410	2	17	34.85477178423236	0.23268361389400033	17.44	14	0.07142857142857142	16.80594243268338	8	0.125	18.295739348370926	6	0	11.840562719812427	17	0	sparse (10-50%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN009354	Chromosome_4A	363	1	8	38.56749311294766	0.5926530612244898	29.238754325259517	8	0	29.238754325259517	8	0	NA	NA	NA	7.140338504936531	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009355	Chromosome_4A	19126	20	439	35.883091080204956	0.7130656668494275	0.768775872264932	420	0	0.45098039215686275	97	0	0.8647752176745839	323	0	0.6008010680907877	57	0	unmethylated (<10%)	Q6MG64	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009356	Chromosome_4A	11791	20	352	36.799253668051904	0.8818791632581512	0.8506616257088847	352	0	0.44307455210942015	113	0	1.0309278350515463	239	0	0.7109004739336493	53	0	unmethylated (<10%)	Q6MG64	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009357	Chromosome_4A	8833	5	204	32.96728178421827	0.850379074788518	1.8827766863130322	204	0	1.5852047556142668	29	0	1.9248738553541394	175	0	1.6089712335446125	47	0	unmethylated (<10%)	O43704	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase 1B2) (Sulfotransferase family cytosolic 1B member 1) (Thyroid hormone sulfotransferase)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; biogenic amine metabolic process [GO:0006576]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; phenol-containing compound metabolic process [GO:0018958]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN009358	Chromosome_4A	14663	6	396	35.60662892995976	0.8521421883576018	1.292146174035938	396	0	1.2987012987012987	26	0	1.2917115177610334	370	0	2.035968781812012	41	0	unmethylated (<10%)	Q95JD5	Sulfotransferase 1B1 (ST1B1) (cSULT1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN009359	Chromosome_4A	1554	1	55	41.184041184041185	0.8360477741585234	0.5021971123666039	55	0	0.5021971123666039	55	0	NA	NA	NA	0.7139214686384497	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009360	Chromosome_4A	324	1	39	53.08641975308642	1.731907894736842	0.5208333333333334	39	0	0.5208333333333334	39	0	NA	NA	NA	0.42171850289931473	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009361	Chromosome_4A	35467	24	552	37.27690529224349	0.44827190168298214	90.19596038650252	526	0.9885931558935361	95.27095595697179	79	1	89.31222167243939	447	0.9865771812080537	91.74603174603175	17	1	methylated (>=50%)	Q6ZQ38	Cullin-associated NEDD8-dissociated protein 1 (Cullin-associated and neddylation-dissociated protein 1) (p120 CAND1)	cell differentiation [GO:0030154]; negative regulation of catalytic activity [GO:0043086]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of RNA polymerase II transcription preinitiation complex assembly [GO:0045899]; protein ubiquitination [GO:0016567]; SCF complex assembly [GO:0010265]	hit with GO BP
GN009362	Chromosome_4A	6408	7	105	36.87578027465668	0.4860205173990491	88.96541398412936	103	0.8932038834951457	68.26196473551637	10	0.7	90.27379815345431	93	0.9139784946236559	0.5869797225186766	57	0	methylated (>=50%)	A7MBJ5	Cullin-associated NEDD8-dissociated protein 1 (Cullin-associated and neddylation-dissociated protein 1)	protein ubiquitination [GO:0016567]; SCF complex assembly [GO:0010265]	hit with GO BP
GN009363	Chromosome_4A	20009	10	317	35.6389624668899	0.5019096430922718	88.52291105121294	316	0.9715189873417721	94.56333140543667	88	1	87.13888152663662	228	0.9605263157894737	53.47269049224545	26	0.6153846153846154	methylated (>=50%)	Q9NV58	E3 ubiquitin-protein ligase RNF19A (EC 2.3.2.31) (Double ring-finger protein) (Dorfin) (RING finger protein 19A) (p38)	microtubule cytoskeleton organization [GO:0000226]; protein ubiquitination [GO:0016567]	hit with GO BP
GN009364	Chromosome_4A	9146	11	243	38.24622785917341	0.7270622273285196	59.232744533499336	243	0.5267489711934157	85.15169194865811	64	0.828125	49.80367186670912	179	0.41899441340782123	0.7735792918774175	51	0	methylated (>=50%)	Q9C509	Sphingosine-1-phosphate lyase (AtSPL1) (S1PL) (SP-lyase) (SPL) (EC 4.1.2.27) (Dihydrosphingosine phosphate lyase 1) (AtDPL1) (Sphingosine-1-phosphate aldolase)	sphingolipid catabolic process [GO:0030149]	hit with GO BP
GN009365	Chromosome_4A	25930	13	365	36.09718472811415	0.43317465816231093	68.81885975463074	364	0.760989010989011	87.0539419087137	78	0.8974358974358975	64.97961560861968	286	0.7237762237762237	32.78855975485189	18	0.3888888888888889	methylated (>=50%)	Q8K078	Solute carrier organic anion transporter family member 4A1 (Organic anion-transporting polypeptide E) (OATP-E) (Sodium-independent organic anion transporter E) (Solute carrier family 21 member 12)	sodium-independent organic anion transport [GO:0043252]; thyroid hormone metabolic process [GO:0042403]; transmembrane transport [GO:0055085]	hit with GO BP
GN009366	Chromosome_4A	4003	4	126	38.29627779165626	0.8585011318956273	0.35398230088495575	126	0	0.4084758743936686	80	0	0.26109660574412535	46	0	0.29980013324450366	60	0	unmethylated (<10%)	Q5G268	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)	exocytosis [GO:0006887]; proteolysis [GO:0006508]	hit with GO BP
GN009367	Chromosome_4A	492	1	27	42.27642276422764	1.2374476013041453	0.09009009009009009	27	0	0.09009009009009009	27	0	NA	NA	NA	0.7818608287724785	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009368	Chromosome_4A	522	1	19	40.99616858237548	0.8662765307013713	0.18050541516245489	19	0	0.18050541516245489	19	0	NA	NA	NA	3.2684824902723735	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009369	Chromosome_4A	522	1	18	40.03831417624521	0.8604395604395605	0.4612546125461255	18	0	0.4612546125461255	18	0	NA	NA	NA	1.1089367253750815	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009370	Chromosome_4A	372	1	14	46.236559139784944	0.7065527065527065	0.7561436672967864	14	0	0.7561436672967864	14	0	NA	NA	NA	0.8849557522123894	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009371	Chromosome_4A	35025	21	482	37.69022127052106	0.3875743062826155	81.498076679207	481	0.9230769230769231	91.59394479073909	144	0.9583333333333334	78.35605808668662	337	0.9080118694362018	47.75086505190311	21	0.42857142857142855	methylated (>=50%)	P70365	Nuclear receptor coactivator 1 (NCoA-1) (EC 2.3.1.48) (Nuclear receptor coactivator protein 1) (mNRC-1) (Steroid receptor coactivator 1) (SRC-1)	cellular response to hormone stimulus [GO:0032870]; cellular response to Thyroglobulin triiodothyronine [GO:1904017]; cerebellum development [GO:0021549]; cerebral cortex development [GO:0021987]; estrogen receptor signaling pathway [GO:0030520]; estrous cycle [GO:0044849]; hippocampus development [GO:0021766]; hypothalamus development [GO:0021854]; labyrinthine layer morphogenesis [GO:0060713]; lactation [GO:0007595]; male gonad development [GO:0008584]; male mating behavior [GO:0060179]; mRNA transcription by RNA polymerase II [GO:0042789]; peroxisome proliferator activated receptor signaling pathway [GO:0035357]; positive regulation of adipose tissue development [GO:1904179]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of female receptivity [GO:0045925]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription from RNA polymerase II promoter by galactose [GO:0000435]; progesterone receptor signaling pathway [GO:0050847]; regulation of cellular response to insulin stimulus [GO:1900076]; regulation of thyroid hormone receptor signaling pathway [GO:0002155]; response to estradiol [GO:0032355]; response to progesterone [GO:0032570]; response to retinoic acid [GO:0032526]	hit with GO BP
GN009372	Chromosome_4A	45500	7	1064	36.9010989010989	0.6874765549080362	0.9579621140039789	864	0	0.457217504898759	42	0	0.9751079104510992	822	0	0.7667031763417306	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009373	Chromosome_4A	10698	10	104	32.51074967283604	0.3684206343529711	82.02282319837424	100	0.8	54.63743676222597	17	0.35294117647058826	84.82081323225361	83	0.891566265060241	0.5957108816521048	30	0	methylated (>=50%)	Q9UHR5	SAP30-binding protein (Transcriptional regulator protein HCNGP)	regulation of DNA-templated transcription [GO:0006355]; regulation of mRNA splicing, via spliceosome [GO:0048024]; response to virus [GO:0009615]	hit with GO BP
GN009374	Chromosome_4A	192	1	1	56.770833333333336	0.06477732793522267	0	1	0	0	1	0	NA	NA	NA	1.3646702047005308	74	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009375	Chromosome_4A	1222	2	30	39.11620294599018	0.6483331859580865	0.9188361408882083	30	0	0.8856682769726248	29	0	1.5625	1	0	0.8658008658008658	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009376	Chromosome_4A	37352	37	454	35.37427714714072	0.39129855504023303	82.37074988355846	453	0.9271523178807947	88.15004262574595	86	0.9767441860465116	81.30174248994717	367	0.9155313351498637	85.55555555555556	6	1	methylated (>=50%)	Q7M6Z5	Kinesin-like protein KIF27	cilium assembly [GO:0060271]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; ventricular system development [GO:0021591]	hit with GO BP
GN009377	Chromosome_4A	13396	19	135	35.56285458345775	0.322756697639621	65.76286764705883	135	0.7407407407407407	61.938202247191015	26	0.7307692307692307	66.51098901098901	109	0.7431192660550459	5.579710144927536	43	0.09302325581395349	methylated (>=50%)	Q8T880	Dynein axonemal intermediate chain 7 homolog (Axonemal 84 kDa protein) (Ci-AXP83.9) (p83.9)	NA	hit, no GO BP
GN009378	Chromosome_4A	26109	15	442	35.22923129955188	0.5459152849995721	88.76058761249338	440	0.9522727272727273	86.56237464901724	50	0.92	88.95820561826115	390	0.9564102564102565	37.70937075599819	53	0.41509433962264153	methylated (>=50%)	P79955	Carboxy-terminal kinesin 2 (XCTK2)	microtubule-based movement [GO:0007018]	hit with GO BP
GN009379	Chromosome_4A	3362	5	99	37.328970850684115	0.8469160305343512	7.935270033144863	98	0.061224489795918366	21.367521367521366	42	0.14285714285714285	2.87248322147651	56	0	9.465020576131687	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009380	Chromosome_4A	5490	10	77	35.537340619307834	0.44630470724615645	78.14207650273224	77	0.8051948051948052	82.88190682556879	19	0.8947368421052632	76.81071211199026	58	0.7758620689655172	0.6445215666831928	34	0	methylated (>=50%)	Q969R8	KICSTOR complex protein ITFG2 (Integrin-alpha FG-GAP repeat-containing protein 2)	cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; negative regulation of TORC1 signaling [GO:1904262]; regulation of TOR signaling [GO:0032006]	hit with GO BP
GN009381	Chromosome_4A	5234	4	123	38.03974016048911	0.6523539306487243	0.5961935335932126	123	0	0.7211538461538461	35	0	0.5667327854916407	88	0	57.5875486381323	46	0.5217391304347826	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009382	Chromosome_4A	7546	4	254	38.841770474423534	0.8924522503562017	0.5176088500964173	251	0	0.4432624113475177	37	0	0.5272206303724928	214	0	0.5399568034557235	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009383	Chromosome_4A	7464	10	113	36.72293676312969	0.45231560284828964	NA	0	NA	NA	NA	NA	NA	NA	NA	22.61904761904762	6	0	NA	Q14444	Caprin-1 (Cell cycle-associated protein 1) (Cytoplasmic activation- and proliferation-associated protein 1) (GPI-anchored membrane protein 1) (GPI-anchored protein p137) (GPI-p137) (p137GPI) (Membrane component chromosome 11 surface marker 1) (RNA granule protein 105)	membraneless organelle assembly [GO:0140694]; negative regulation of translation [GO:0017148]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of stress granule assembly [GO:0062029]; regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0106288]	hit with GO BP
GN009384	Chromosome_4A	420	1	18	45.95238095238095	0.8118556701030928	0.9596928982725528	18	0	0.9596928982725528	18	0	NA	NA	NA	0.7100591715976331	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009385	Chromosome_4A	5355	9	154	37.75910364145658	0.8068609647852597	1.7401791867677463	154	0	1.4918625678119348	66	0	1.8930957683741647	88	0	0.43138312213534646	66	0	unmethylated (<10%)	Q09660	Probable cytochrome P450 CYP44 (EC 1.14.-.-)	NA	hit, no GO BP
GN009386	Chromosome_4A	8884	6	120	33.54344889689329	0.4811968172979531	90.10375099760574	119	0.9495798319327731	92.01604083120671	42	0.9761904761904762	89.23357664233576	77	0.935064935064935	0.8	39	0	methylated (>=50%)	E1BUG7	Protein SPT2 homolog	heterochromatin formation [GO:0031507]; nucleosome assembly [GO:0006334]; regulation of DNA-templated transcription [GO:0006355]; transcription by RNA polymerase I [GO:0006360]	hit with GO BP
GN009387	Chromosome_4A	798	1	6	35.21303258145363	0.25538724130573925	64.28571428571429	6	0.6666666666666666	64.28571428571429	6	0.6666666666666666	NA	NA	NA	1.3905683192261185	20	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009388	Chromosome_4A	1021	3	15	39.27522037218413	0.38245430026970334	89.48106591865357	15	1	89.0795631825273	14	1	93.05555555555556	1	1	94.29373246024322	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009389	Chromosome_4A	435	1	1	48.96551724137931	0.0385980479148181	100	1	1	100	1	1	NA	NA	NA	89.75501113585746	21	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009390	Chromosome_4A	11071	11	132	35.19103965314786	0.38513428040125997	82.5594423005104	130	0.9153846153846154	88.32116788321167	22	1	81.90264873110526	108	0.8981481481481481	93.51669941060904	11	1	methylated (>=50%)	Q9NR21	Protein mono-ADP-ribosyltransferase PARP11 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 11) (ARTD11) (Poly [ADP-ribose] polymerase 11) (PARP-11)	protein auto-ADP-ribosylation [GO:0070213]	hit with GO BP
GN009391	Chromosome_4A	5600	5	51	38.714285714285715	0.24343530169867722	78.08965228320066	51	0.803921568627451	73.33333333333333	32	0.71875	84.9539406345957	19	0.9473684210526315	0.47551117451260105	47	0	methylated (>=50%)	Q3UY23	Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog (FDX-ACDB domain-containing protein 1)	rRNA base methylation [GO:0070475]	hit with GO BP
GN009392	Chromosome_4A	15935	14	206	37.427047379981175	0.3696448476725767	89.29274101687895	199	0.9899497487437185	91.70267934312878	60	1	88.53329701756775	139	0.9856115107913669	31.04602510460251	34	0.2647058823529412	methylated (>=50%)	Q9ULL5	Proline-rich protein 12	intracellular protein localization [GO:0008104]	hit with GO BP
GN009393	Chromosome_4A	10732	11	183	36.06969809914275	0.5255378588401516	20	5	0	NA	NA	NA	20	5	0	0.8147360963513992	59	0	sparse (10-50%)	Q5M9G3	Caprin-1 (Cytoplasmic activation- and proliferation-associated protein 1) (GPI-anchored protein p137) (GPI-p137) (p137GPI) (RNA granule protein 105)	generation of neurons [GO:0048699]; intracellular mRNA localization [GO:0008298]; membraneless organelle assembly [GO:0140694]; negative regulation of translation [GO:0017148]; nervous system development [GO:0007399]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of stress granule assembly [GO:0062029]; regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0106288]; synapse assembly [GO:0007416]; synapse organization [GO:0050808]	hit with GO BP
GN009394	Chromosome_4A	756	1	37	46.6931216931217	0.912745545911375	75	4	1	75	4	1	NA	NA	NA	90.52783803326102	29	1	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN009395	Chromosome_4A	2298	3	31	42.210617928633596	0.30326818532062444	97.4907063197026	31	1	97.4869109947644	29	1	97.52066115702479	2	1	96.4041095890411	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009396	Chromosome_4A	822	1	11	40.14598540145985	0.3338872272072671	16.953316953316953	11	0.09090909090909091	16.953316953316953	11	0.09090909090909091	NA	NA	NA	53.6764705882353	26	0.5769230769230769	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009397	Chromosome_4A	204	1	7	45.588235294117645	0.6832535885167464	2.074688796680498	7	0	2.074688796680498	7	0	NA	NA	NA	2.376425855513308	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009398	Chromosome_4A	1595	2	37	37.99373040752351	0.6479468599033816	0.6699419383653417	37	0	0.6548175865294668	35	0	0.9900990099009901	2	0	0.722635494155154	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009399	Chromosome_4A	12533	11	228	35.31476900981409	0.5853791043027206	47.73964796758263	226	0.4646017699115044	42.46201791975068	56	0.44642857142857145	48.76389203901111	170	0.47058823529411764	92.62172284644194	35	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009400	Chromosome_4A	42402	6	1003	34.5054478562332	0.7946930405788717	1.9811562999980248	989	0	0.9414225941422594	42	0	2.0219644873242326	947	0	1.492537313432836	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009401	Chromosome_4A	29658	9	516	32.97929732281341	0.671935357333195	2.3620580455273648	513	0.01364522417153996	1.2063765618267988	42	0	2.471451876019576	471	0.014861995753715499	0.6371359223300971	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009402	Chromosome_4A	8236	8	256	39.42447790189412	0.8002119308249286	1.1868221812973194	232	0	1.204335608189482	49	0	1.180832074694494	183	0	0.542189088444595	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002338	Chromosome_4A	612	1	14	44.28104575163399	0.468503937007874	1.492537313432836	14	0	1.492537313432836	14	0	NA	NA	NA	2.8846153846153846	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009403	Chromosome_4A	3595	4	86	40.111265646731574	0.6102649738658076	5.335489086499596	86	0	4.8956083513318935	24	0	5.598621877691645	62	0	4.132841328413284	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009404	Chromosome_4A	10152	8	156	36.928684003152085	0.485915998564078	40.958969465648856	148	0.47297297297297297	33.46521595779756	27	0.37037037037037035	43.34066855286598	121	0.49586776859504134	53.24568611339359	44	0.75	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009405	Chromosome_4A	8854	5	147	34.26699796702056	0.566810727761113	91.68280501477933	147	0.9727891156462585	97.40973312401884	20	1	90.82815977509664	127	0.968503937007874	73.93561786085151	32	0.6875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009406	Chromosome_4A	13276	5	210	36.2006628502561	0.48370172455671606	90.57152519445384	206	0.970873786407767	96.69781931464175	44	1	89.82549317147193	162	0.9629629629629629	29.739336492890995	34	0.14705882352941177	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009407	Chromosome_4A	9336	5	172	34.87574978577549	0.6066682458707403	76.10337126449005	161	0.8819875776397516	89.1566265060241	22	0.9545454545454546	73.63762801871286	139	0.8705035971223022	0.5039899202015959	56	0	methylated (>=50%)	P35295	Ras-related protein Rab-20 (EC 3.6.5.2)	cellular response to type II interferon [GO:0071346]; endocytosis [GO:0006897]; phagosome acidification [GO:0090383]; phagosome-lysosome fusion [GO:0090385]	hit with GO BP
GN009408	Chromosome_4A	705	1	17	37.02127659574468	0.7166347763692896	0.3838771593090211	16	0	0.3838771593090211	16	0	NA	NA	NA	0.7074490220557637	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009409	Chromosome_4A	1444	3	12	31.786703601108034	0.33310265282583623	1.4462809917355373	12	0	2.5	2	0	1.3513513513513513	10	0	1.3520280420630946	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009410	Chromosome_4A	549	1	13	37.34061930783242	0.7048192771084337	0.56657223796034	13	0	0.56657223796034	13	0	NA	NA	NA	0.46104195481788846	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009411	Chromosome_4A	819	1	17	47.00854700854701	0.385401096163428	0.8130081300813008	9	0	0.8130081300813008	9	0	NA	NA	NA	1.0062893081761006	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009412	Chromosome_4A	45301	17	1157	36.102955784640514	0.7852085107657967	0.677710843373494	1017	0	0.38999770589584765	74	0	0.7021024174883793	943	0	2.3355869698832206	62	0	unmethylated (<10%)	Q9JHA8	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009413	Chromosome_4A	1362	1	59	41.70337738619677	1.001782708969644	0.47598442232799654	59	0	0.47598442232799654	59	0	NA	NA	NA	1.0046885465505693	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009414	Chromosome_4A	213	1	8	45.070422535211264	0.742483660130719	0	8	0	0	8	0	NA	NA	NA	0.45146726862302483	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009415	Chromosome_4A	20097	13	257	36.93586107379211	0.3764459110852418	86.43683374914947	256	0.98828125	92.6131850675139	26	1	85.96201990596569	230	0.9869565217391304	89.84289367921082	37	1	methylated (>=50%)	Q68FL6	Methionine--tRNA ligase, cytoplasmic (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)	cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to platelet-derived growth factor stimulus [GO:0036120]; homocysteine metabolic process [GO:0050667]; methionyl-tRNA aminoacylation [GO:0006431]; positive regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901838]; rRNA transcription [GO:0009303]	hit with GO BP
GN009416	Chromosome_4A	4704	3	80	33.14200680272109	0.6195200168576875	89.20375521557719	80	0.9875	85.48601864181092	12	1	89.7620475904819	68	0.9852941176470589	90.9781152300134	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009417	Chromosome_4A	3517	5	25	35.82598805800398	0.22836535339814398	92.42424242424242	25	1	96.50959860383944	15	1	89.54489544895449	10	1	93.18181818181819	6	1	methylated (>=50%)	A0A9J7F5X6	Methionine--tRNA ligase, cytoplasmic (EC 6.1.1.10) (Methionyl-tRNA synthetase)	methionyl-tRNA aminoacylation [GO:0006431]	hit with GO BP
GN009418	Chromosome_4A	11012	8	118	34.28078459861969	0.36475695146215376	79.99723145071982	118	0.8983050847457628	63.7546468401487	19	0.7368421052631579	82.83994795055303	99	0.9292929292929293	1.1887608069164266	51	0	methylated (>=50%)	Q6PF21	Methionine--tRNA ligase, cytoplasmic (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)	methionyl-tRNA aminoacylation [GO:0006431]	hit with GO BP
GN009419	Chromosome_4A	18530	13	535	37.29627630868861	0.8311125173205205	1.2013821922211507	535	0	1.7108433734939759	210	0	0.9464673257776706	325	0	1.1336310546204054	50	0	unmethylated (<10%)	Q5CZC0	Fibrous sheath-interacting protein 2	flagellated sperm motility [GO:0030317]; protein localization to cilium [GO:0061512]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN009420	Chromosome_4A	4070	8	119	36.68304668304668	0.8691275167785235	0.4418262150220913	118	0	0.5475989890480202	57	0	0.3746320578003746	61	0	1.193238316208154	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009421	Chromosome_4A	336	1	4	48.51190476190476	0.20804953560371517	80	4	0.75	80	4	0.75	NA	NA	NA	83.11817279046673	13	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009422	Chromosome_4A	957	2	18	40.43887147335423	0.4634382566585956	94.79034307496823	18	1	94.40993788819875	16	1	96.5034965034965	2	1	93.54317998385795	18	1	methylated (>=50%)	Q8N7N6	E3 ubiquitin ligase TRAF3IP2 (EC 2.3.2.27) (Adapter protein CIKS) (Connection to IKK and SAPK/JNK) (E3 ubiquitin-protein ligase CIKS) (Nuclear factor NF-kappa-B activator 1) (ACT1) (TRAF3-interacting protein 2)	B cell affinity maturation [GO:0002344]; B cell apoptotic process [GO:0001783]; B cell homeostasis [GO:0001782]; B cell mediated immunity [GO:0019724]; CD40 signaling pathway [GO:0023035]; cellular response to cytokine stimulus [GO:0071345]; cellular response to interleukin-17 [GO:0097398]; cytokine-mediated signaling pathway [GO:0019221]; eosinophil homeostasis [GO:1990959]; eosinophil mediated immunity [GO:0002447]; establishment of T cell polarity [GO:0001768]; gene expression [GO:0010467]; heart development [GO:0007507]; humoral immune response [GO:0006959]; immune response [GO:0006955]; inflammatory response [GO:0006954]; interleukin-17-mediated signaling pathway [GO:0097400]; interleukin-17A-mediated signaling pathway [GO:0038173]; kidney development [GO:0001822]; lymph node development [GO:0048535]; mRNA stabilization [GO:0048255]; mucus secretion [GO:0070254]; negative regulation of interleukin-17-mediated signaling pathway [GO:1903882]; neutrophil activation [GO:0042119]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of defense response to virus by host [GO:0002230]; protein import into nucleus [GO:0006606]; protein K63-linked ubiquitination [GO:0070534]; protein localization to nucleus [GO:0034504]; protein localization to P-body [GO:0110012]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; response to cytokine [GO:0034097]; response to xenobiotic stimulus [GO:0009410]; skin development [GO:0043588]; spleen development [GO:0048536]; T cell activation [GO:0042110]; T cell differentiation [GO:0030217]; T-helper 17 type immune response [GO:0072538]; transitional two stage B cell differentiation [GO:0002334]; tumor necrosis factor-mediated signaling pathway [GO:0033209]; type 2 immune response [GO:0042092]	hit with GO BP
GN009423	Chromosome_4A	1218	1	18	47.947454844006565	0.259029525396094	92.36641221374046	18	1	92.36641221374046	18	1	NA	NA	NA	85.88528678304239	25	0.96	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016162	Chromosome_4A	1987	6	14	32.71263210870659	0.2637877408587468	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009424	Chromosome_4A	17635	6	268	35.27076835837823	0.4892637812935472	91.88288502737443	266	0.9962406015037594	95.04132231404958	17	1	91.66401527203308	249	0.9959839357429718	90.4833836858006	12	1	methylated (>=50%)	Q3ZC01	CCR4-NOT transcription complex subunit 7 (EC 3.1.13.4) (CCR4-associated factor 1) (CAF-1)	deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; defense response to virus [GO:0051607]; miRNA-mediated gene silencing by mRNA destabilization [GO:0035279]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; piRNA-mediated gene silencing by mRNA destabilization [GO:0140991]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; positive regulation of viral genome replication [GO:0045070]; regulatory ncRNA-mediated gene silencing [GO:0031047]	hit with GO BP
GN009425	Chromosome_4A	4174	5	103	35.98466698610446	0.7628681950457804	1.071558300036324	103	0	1.1083743842364533	18	0	1.0651896037494675	85	0	1.4444444444444444	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009426	Chromosome_4A	1200	1	53	43.583333333333336	0.9347442680776014	0.47493403693931396	53	0	0.47493403693931396	53	0	NA	NA	NA	0.5102040816326531	42	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN009427	Chromosome_4A	23234	24	312	37.647413273650685	0.3800391436216091	87.30646495686089	285	0.9403508771929825	86.84843624699278	79	0.9113924050632911	87.43646157347698	206	0.9514563106796117	0.7954922108054359	59	0	methylated (>=50%)	Q8TAQ2	SWI/SNF complex subunit SMARCC2 (BRG1-associated factor 170) (BAF170) (SWI/SNF complex 170 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2)	chromatin remodeling [GO:0006338]; negative regulation of DNA-templated transcription [GO:0045892]; nucleosome disassembly [GO:0006337]; positive regulation of cell differentiation [GO:0045597]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of T cell differentiation [GO:0045582]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009428	Chromosome_4A	1372	2	18	41.180758017492714	0.31108759730934926	0.33783783783783783	18	0	0.45977011494252873	12	0	0	6	0	0.8534850640113798	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009429	Chromosome_4A	624	1	22	49.03846153846154	0.5900709219858156	12.355212355212355	14	0.07142857142857142	12.355212355212355	14	0.07142857142857142	NA	NA	NA	7.352941176470588	15	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009430	Chromosome_4A	1291	3	19	37.490317583268784	0.42117101648351646	1.023890784982935	15	0	1.1194029850746268	14	0	0	1	0	1.903772931810315	49	0	unmethylated (<10%)	P38766	ATP-dependent DNA helicase RRM3 (EC 5.6.2.3) (DNA 5'-3' helicase RRM3) (Regulation of Ty1 transposition protein 104) (rDNA recombination mutation protein 3)	DNA repair [GO:0006281]; DNA replication [GO:0006260]; replication fork progression beyond termination site [GO:0097046]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN003693	Chromosome_4A	309	1	24	57.92880258899677	0.9342403628117913	0.6134969325153374	23	0	0.6134969325153374	23	0	NA	NA	NA	0.7843137254901961	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009431	Chromosome_4A	525	1	16	48	0.5303030303030303	2.5157232704402515	16	0	2.5157232704402515	16	0	NA	NA	NA	2.1357742181540806	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009432	Chromosome_4A	8906	2	224	33.876038625645634	0.8767057789496814	7.343146122851739	222	0	6.759443339960239	41	0	7.425835523845287	181	0	2.118003025718608	54	0	unmethylated (<10%)	Q01622	Homeobox protein LOX2	anterior/posterior pattern specification [GO:0009952]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009433	Chromosome_4A	9126	2	248	34.4071882533421	0.9187575277697829	3.4139294403892944	248	0	2.2580645161290325	29	0	3.5018818523973163	219	0	1.0227563283047814	56	0	unmethylated (<10%)	Q9TT89	Homeobox protein Hox-B7	anterior/posterior pattern specification [GO:0009952]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009434	Chromosome_4A	429	1	12	41.02564102564103	0.6753246753246753	0.9943181818181818	12	0	0.9943181818181818	12	0	NA	NA	NA	2.026431718061674	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009435	Chromosome_4A	446	2	10	33.408071748878925	0.8168498168498168	0.5602240896358543	10	0	0	7	0	1.36986301369863	3	0	0.7411982705373688	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009436	Chromosome_4A	855	1	16	36.14035087719298	0.5744520030234316	0.8968609865470852	16	0	0.8968609865470852	16	0	NA	NA	NA	3.167898627243928	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009437	Chromosome_4A	180	1	6	43.888888888888886	0.9473684210526315	NA	0	NA	NA	NA	NA	NA	NA	NA	1.408450704225352	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009438	Chromosome_4A	426	1	10	40.375586854460096	0.589456205894562	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009439	Chromosome_4A	1263	1	3	36.26286619160729	0.07476764607218264	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009440	Chromosome_4A	1725	3	11	35.82608695652174	0.1988055948451988	1.2170385395537526	11	0	1.5479876160990713	9	0	0.5882352941176471	2	0	0.5742411812961444	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009441	Chromosome_4A	990	1	8	39.696969696969695	0.20518134715025907	0.32894736842105265	8	0	0.32894736842105265	8	0	NA	NA	NA	0.3519061583577713	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009442	Chromosome_4A	402	1	9	48.507462686567166	0.4249471458773784	0	9	0	0	9	0	NA	NA	NA	1.5728056823947234	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009443	Chromosome_4A	9353	2	225	33.85010157168823	0.839984864166673	4.169018627530038	218	0	3.4518828451882846	27	0	4.228920926168633	191	0	0.9641873278236914	71	0	unmethylated (<10%)	Q9IA11	Homeobox protein Hox-D5	anterior/posterior pattern specification [GO:0009952]	hit with GO BP
GN009444	Chromosome_4A	3903	2	127	35.15244683576736	1.0540304334512793	1.13341526696709	127	0	0.29354207436399216	29	0	1.2696397397238535	98	0	1.712450945415626	38	0	unmethylated (<10%)	Q1KKS8	Homeobox protein Hox-D4a	anterior/posterior pattern specification [GO:0009952]; embryonic skeletal system morphogenesis [GO:0048704]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN009445	Chromosome_4A	2302	2	82	40.877497827975674	0.8538884666883798	3.436123348017621	82	0	3.5570854847963282	57	0	3.309265944645006	25	0	0.8620689655172413	43	0	unmethylated (<10%)	Q1KL12	Homeobox protein Hox-A3a	anterior/posterior pattern specification [GO:0009952]; embryonic skeletal system morphogenesis [GO:0048704]	hit with GO BP
GN009446	Chromosome_4A	1602	1	42	40.0749063670412	0.6552785352551617	0.6369426751592356	42	0	0.6369426751592356	42	0	NA	NA	NA	0.7076139258420606	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009447	Chromosome_4A	1443	1	76	45.53014553014553	1.0168001780151312	2.610441767068273	76	0	2.610441767068273	76	0	NA	NA	NA	3.726006774557772	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009448	Chromosome_4A	1117	2	32	49.14950760966875	0.47850066934404284	0.5889281507656066	27	0	0.5889281507656066	27	0	NA	NA	NA	0.4166666666666667	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002965	Chromosome_4A	441	1	12	43.08390022675737	0.5874125874125874	0	9	0	0	9	0	NA	NA	NA	0.5842259006815969	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009449	Chromosome_4A	13495	2	390	34.32382363838459	0.9816280808243584	0.6261030338683923	387	0	0.3707136237256719	45	0	0.638232316563229	342	0	0.48795364440378164	59	0	unmethylated (<10%)	P09022	Homeobox protein Hox-A1 (Early retinoic acid 1) (Homeobox protein Hox-1.6) (Homeoboxless protein ERA-1-399) (Homeotic protein ERA-1-993)	abducens nerve formation [GO:0021599]; anatomical structure formation involved in morphogenesis [GO:0048646]; anatomical structure morphogenesis [GO:0009653]; anterior/posterior pattern specification [GO:0009952]; artery development [GO:0060840]; artery morphogenesis [GO:0048844]; cellular response to ethanol [GO:0071361]; cellular response to retinoic acid [GO:0071300]; central nervous system neuron differentiation [GO:0021953]; cochlea development [GO:0090102]; cochlea morphogenesis [GO:0090103]; cognition [GO:0050890]; embryonic neurocranium morphogenesis [GO:0048702]; facial nerve structural organization [GO:0021612]; facial nucleus development [GO:0021754]; hindbrain development [GO:0030902]; inner ear development [GO:0048839]; inner ear morphogenesis [GO:0042472]; motor neuron axon guidance [GO:0008045]; nervous system development [GO:0007399]; neuromuscular process [GO:0050905]; optokinetic behavior [GO:0007634]; outer ear morphogenesis [GO:0042473]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of behavior [GO:0050795]; regulation of transcription by RNA polymerase II [GO:0006357]; rhombomere 3 development [GO:0021569]; rhombomere 4 development [GO:0021570]; rhombomere 5 development [GO:0021571]; semicircular canal formation [GO:0060876]; sensory perception of sound [GO:0007605]	hit with GO BP
GN009450	Chromosome_4A	3652	4	103	35.049288061336256	0.9192473118279569	0.9164610504053577	103	0	0.9532062391681109	22	0	0.9070796460176991	81	0	0.6819590824550527	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009451	Chromosome_4A	1430	4	33	35.24475524475525	0.7488099016185338	0.5122367672168469	33	0	0.5681818181818182	15	0	0.45610034207525657	18	0	0.8317025440313112	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009452	Chromosome_4A	399	2	15	39.34837092731829	0.976027397260274	0.5586592178770949	15	0	0.5586592178770949	15	0	NA	NA	NA	0.5235602094240838	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009453	Chromosome_4A	1023	1	39	39.49169110459433	0.9831932773109243	0.5622188905547226	39	0	0.5622188905547226	39	0	NA	NA	NA	4.0028591851322375	54	0	unmethylated (<10%)	A0A8V0YZK7	Neuromedin-U receptor 1 (NMU-R1) (G protein-coupled receptor 66) (G protein-coupled receptor FM-3)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; calcium-mediated signaling [GO:0019722]; neuropeptide signaling pathway [GO:0007218]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of calcium-mediated signaling [GO:0050850]	hit with GO BP
GN009454	Chromosome_4A	2829	1	88	40.93319194061506	0.7614142402740396	93.50352112676056	88	0.9772727272727273	93.50352112676056	88	0.9772727272727273	NA	NA	NA	83.78378378378379	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009455	Chromosome_4A	4925	7	200	40.203045685279186	1.0052959193150515	0.9461940403897755	200	0	1.0554089709762533	93	0	0.8807588075880759	107	0	7.603503184713376	49	0.10204081632653061	unmethylated (<10%)	Q6DFC8	Zinc finger protein 395	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009456	Chromosome_4A	38248	17	556	35.607090566827026	0.4591191196507516	74.59892346068006	518	0.8822393822393823	81.0610734114744	67	0.9402985074626866	73.99764658611485	451	0.8736141906873615	16.03194103194103	28	0	methylated (>=50%)	Q4FZV0	Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)	carbohydrate metabolic process [GO:0005975]; glycoprotein catabolic process [GO:0006516]	hit with GO BP
GN009457	Chromosome_4A	633	1	20	44.07582938388626	0.6515697375193	0.7656967840735069	20	0	0.7656967840735069	20	0	NA	NA	NA	0.5245901639344263	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009458	Chromosome_4A	8659	2	194	37.11745005196905	0.650812253283707	0.6918180979614427	192	0	0.43383947939262474	10	0	0.7032755298651252	182	0	0.3281999495077001	59	0	unmethylated (<10%)	Q5E9E1	PDZ and LIM domain protein 1 (Elfin)	actin cytoskeleton organization [GO:0030036]; heart development [GO:0007507]; muscle structure development [GO:0061061]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN009459	Chromosome_4A	1139	4	48	48.639157155399474	0.7193684210526315	0.6145741878841089	42	0	0.6628787878787878	40	0	0	2	0	1.1979463776383343	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009460	Chromosome_4A	7129	4	79	37.7332024126806	0.31269210439819134	69.51152579582876	79	0.8481012658227848	76.20365246264527	53	0.9056603773584906	62.928688078388674	26	0.7307692307692307	34.97942386831276	15	0.2	methylated (>=50%)	A2VDW9	Zinc finger protein Aiolos (Ikaros family zinc finger protein 3)	B cell differentiation [GO:0030183]; regulation of apoptotic process [GO:0042981]; regulation of B cell differentiation [GO:0045577]; regulation of B cell proliferation [GO:0030888]; regulation of lymphocyte differentiation [GO:0045619]; regulation of transcription by RNA polymerase II [GO:0006357]; T cell differentiation [GO:0030217]	hit with GO BP
GN009461	Chromosome_4A	1296	1	47	34.876543209876544	1.2019891072697135	75.96899224806202	5	0.6	75.96899224806202	5	0.6	NA	NA	NA	75.62700964630226	20	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009462	Chromosome_4A	36335	5	400	37.060685289665614	0.32397620043280045	81.28354591100594	296	0.8918918918918919	88.60435339308579	20	0.95	80.93799105523993	276	0.8876811594202898	74.81188118811882	35	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009463	Chromosome_4A	16081	6	312	37.67800509918538	0.5628411696051283	73.86941138629784	262	0.8854961832061069	91.0394265232975	10	1	73.23013278174417	252	0.8809523809523809	65.6686626746507	47	0.8723404255319149	methylated (>=50%)	Q3SXD3	5'-deoxynucleotidase HDDC2 (EC 3.1.3.89) (HD domain-containing protein 2)	deoxyribonucleoside monophosphate catabolic process [GO:0009159]	hit with GO BP
GN009464	Chromosome_4A	2794	2	58	40.01431639226915	0.5187041678269748	45.1063829787234	57	0.47368421052631576	25.148279952550414	21	0.19047619047619047	56.27073656270736	36	0.6388888888888888	2.5908600215905	54	0	sparse (10-50%)	Q9CY16	Small ribosomal subunit protein bS1m (28S ribosomal protein S28, mitochondrial) (MRP-S28) (S28mt)	mitochondrial translation [GO:0032543]	hit with GO BP
GN009465	Chromosome_4A	1119	2	40	39.41018766756032	0.9246023548853542	0.9248554913294798	40	0	0.6949270326615705	36	0	2.0618556701030926	4	0	0.4686373467916366	49	0	unmethylated (<10%)	Q29043	Galactoside alpha-(1,2)-fucosyltransferase 1 (Alpha(1,2)FT 1) (Fucosyltransferase 1) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT1) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT1) (EC 2.4.1.344)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; olfactory bulb development [GO:0021772]; positive regulation of cell-matrix adhesion [GO:0001954]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell-matrix adhesion [GO:1904906]; positive regulation of sprouting angiogenesis [GO:1903672]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN009466	Chromosome_4A	204	1	10	46.07843137254902	1.0134128166915053	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9795191451469278	73	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009467	Chromosome_4A	15505	12	316	34.756530151564014	0.6748855488832579	25.354385156159964	315	0.29523809523809524	56.52034604293495	64	0.65625	18.52034005480222	251	0.20318725099601595	3.6260375709916994	44	0	sparse (10-50%)	Q58715	Uncharacterized sodium-dependent transporter MJ1319	sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN009468	Chromosome_4A	3228	2	87	38.04213135068154	0.7464833657618577	1.9482407676650189	87	0	1.608187134502924	27	0	2.0326678765880217	60	0	3.347826086956522	66	0	unmethylated (<10%)	P46209	Protein usf	NA	hit, no GO BP
GN009469	Chromosome_4A	210	1	9	48.57142857142857	0.75	0.3412969283276451	9	0	0.3412969283276451	9	0	NA	NA	NA	0.87527352297593	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009470	Chromosome_4A	1824	1	77	40.46052631578947	1.0331920903954803	4.131886477462437	77	0.012987012987012988	4.131886477462437	77	0.012987012987012988	NA	NA	NA	3.3416183374758353	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009471	Chromosome_4A	1739	2	15	41.74813110983324	0.22316807118107543	0.4282655246252677	15	0	0	4	0	0.6191950464396285	11	0	1.606425702811245	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009472	Chromosome_4A	8630	8	197	35.94438006952491	0.7100462961996187	70.96133751306165	193	0.5906735751295337	69.89795918367346	23	0.5652173913043478	71.08265424912689	170	0.5941176470588235	0.4749568221070812	50	0	methylated (>=50%)	Q5ZK10	NSFL1 cofactor p47 (p97 cofactor p47)	autophagosome assembly [GO:0000045]; establishment of mitotic spindle orientation [GO:0000132]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; negative regulation of protein localization to centrosome [GO:1904780]; nuclear membrane reassembly [GO:0031468]; positive regulation of mitotic centrosome separation [GO:0046604]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN009473	Chromosome_4A	27164	6	373	35.69798262406126	0.44533257454029596	69.00672463271512	361	0.7229916897506925	45.0910530482977	54	0.42592592592592593	71.90816963642476	307	0.7752442996742671	0.5414410662224073	45	0	methylated (>=50%)	P18075	Bone morphogenetic protein 7 (BMP-7) (Osteogenic protein 1) (OP-1) (Eptotermin alfa)	allantois development [GO:1905069]; BMP signaling pathway [GO:0030509]; cardiac muscle tissue development [GO:0048738]; cardiac septum morphogenesis [GO:0060411]; cellular response to BMP stimulus [GO:0071773]; cellular response to hypoxia [GO:0071456]; chorio-allantoic fusion [GO:0060710]; dendrite development [GO:0016358]; endocardial cushion formation [GO:0003272]; epithelial to mesenchymal transition [GO:0001837]; eye development [GO:0001654]; heart development [GO:0007507]; heart trabecula morphogenesis [GO:0061384]; hindbrain development [GO:0030902]; mesenchymal cell differentiation [GO:0048762]; mesenchyme development [GO:0060485]; mesonephros development [GO:0001823]; metanephric mesenchymal cell proliferation involved in metanephros development [GO:0072136]; metanephric mesenchyme morphogenesis [GO:0072133]; metanephros development [GO:0001656]; monocyte aggregation [GO:0070487]; negative regulation of cell cycle [GO:0045786]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of glomerular mesangial cell proliferation [GO:0072125]; negative regulation of mitotic nuclear division [GO:0045839]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of striated muscle cell apoptotic process [GO:0010664]; nephrogenic mesenchyme morphogenesis [GO:0072134]; neural fold elevation formation [GO:0021502]; neuron projection morphogenesis [GO:0048812]; osteoblast differentiation [GO:0001649]; pericardium morphogenesis [GO:0003344]; pharyngeal system development [GO:0060037]; positive regulation of bone mineralization [GO:0030501]; positive regulation of brown fat cell differentiation [GO:0090336]; positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis [GO:1905312]; positive regulation of dendrite development [GO:1900006]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of gene expression [GO:0010628]; positive regulation of heterotypic cell-cell adhesion [GO:0034116]; positive regulation of hyaluranon cable assembly [GO:1900106]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of SMAD protein signal transduction [GO:0060391]; regulation of removal of superoxide radicals [GO:2000121]; response to estradiol [GO:0032355]; response to peptide hormone [GO:0043434]; response to vitamin D [GO:0033280]; skeletal system development [GO:0001501]; ureteric bud development [GO:0001657]	hit with GO BP
GN009474	Chromosome_4A	13383	3	165	30.942240155421057	0.5226227380457056	86.18608200929717	163	0.9877300613496932	93.14845024469821	19	1	85.8768115942029	144	0.9861111111111112	64.77869467366841	57	0.631578947368421	methylated (>=50%)	Q5F477	Lipid droplet-associated hydrolase (EC 3.1.1.13) (Lipid droplet-associated serine hydrolase)	cholesterol homeostasis [GO:0042632]; intracellular triglyceride homeostasis [GO:0035356]; lipid droplet fusion [GO:0160077]; lipid droplet organization [GO:0034389]; lipid storage [GO:0019915]	hit with GO BP
GN009475	Chromosome_4A	23053	21	443	35.3446406107665	0.6164018331360441	89.76599200948326	421	0.9928741092636579	90.97222222222223	63	1	89.5813294183162	358	0.9916201117318436	60.67503924646782	21	0.6190476190476191	methylated (>=50%)	Q9Z1G4	V-type proton ATPase 116 kDa subunit a 1 (V-ATPase 116 kDa subunit a 1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar adenosine triphosphatase subunit Ac116) (Vacuolar proton pump subunit 1) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1)	regulation of macroautophagy [GO:0016241]; synaptic vesicle lumen acidification [GO:0097401]; vacuolar acidification [GO:0007035]	hit with GO BP
GN009476	Chromosome_4A	966	1	38	42.7536231884058	0.8626621545403271	0.4508566275924256	38	0	0.4508566275924256	38	0	NA	NA	NA	1.2591815320041972	64	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN009477	Chromosome_4A	7945	2	107	32.93895531780994	0.4969654135478998	91.09994086339444	107	0.9906542056074766	93.41339155749637	53	1	89.51693227091633	54	0.9814814814814815	71.0377358490566	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009478	Chromosome_4A	2355	3	84	41.740976645435246	0.819191492533605	0.7879185817465528	83	0	0.5326231691078562	34	0	1.0362694300518134	49	0	0.4004004004004004	67	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN009479	Chromosome_4A	6649	7	192	39.32922243946458	0.7477770670640416	1.2727048066230076	192	0	0.39860488290981566	45	0	1.5609595793624713	147	0	3.450980392156863	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009480	Chromosome_4A	315	1	5	41.26984126984127	0.3728693181818182	0	5	0	0	5	0	NA	NA	NA	0.6308100929614874	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009481	Chromosome_4A	3405	4	77	35.30102790014684	0.7284839054750559	0.5777777777777777	77	0	0.41360294117647056	41	0	0.7314974182444062	36	0	0.6493506493506493	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009482	Chromosome_4A	1349	2	41	36.8421052631579	0.8983108656813383	0.4147465437788018	41	0	0.3019627579265224	38	0	1.639344262295082	3	0	0.749802683504341	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009483	Chromosome_4A	3449	3	35	34.70571180052189	0.3385526219843954	60.011607661056296	33	0.696969696969697	89.95633187772926	11	0.9090909090909091	49.1699604743083	22	0.5909090909090909	77.70295548073325	70	0.7285714285714285	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009484	Chromosome_4A	29096	18	615	33.36541105306571	0.7594978938135695	0.8083140877598153	586	0	0.7502679528403001	103	0	0.8185281581230432	483	0	NA	NA	NA	unmethylated (<10%)	G5EBQ8	Chitin synthase chs-2 (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase chs-2)	chitin biosynthetic process [GO:0006031]; positive regulation of nematode larval development [GO:0061063]	hit with GO BP
GN009485	Chromosome_4A	14598	11	190	35.78572407179065	0.41242193540712546	83.41107101997711	190	0.8947368421052632	74.12687099073415	24	0.7916666666666666	84.71887550200803	166	0.9096385542168675	39.07486305538649	26	0.34615384615384615	methylated (>=50%)	P11172	Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10); Orotidine 5'-phosphate decarboxylase (ODC) (OMPD) (EC 4.1.1.23) (OMPdecase)]	'de novo' CTP biosynthetic process [GO:0044210]; 'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; 'de novo' UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]; UDP biosynthetic process [GO:0006225]; UMP biosynthetic process [GO:0006222]	hit with GO BP
GN009486	Chromosome_4A	8998	5	173	36.074683262947325	0.5909668650914172	75.98350798831815	173	0.815028901734104	61.12759643916914	7	0.5714285714285714	76.42636001769128	166	0.8253012048192772	3.414405986903648	43	0	methylated (>=50%)	Q1JQ91	DNA-directed RNA polymerase II subunit RPB4 (RNA polymerase II subunit B4) (DNA-directed RNA polymerase II subunit D)	transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN009487	Chromosome_4A	468	1	7	40.81196581196581	0.35928931783285806	68.93732970027249	7	1	68.93732970027249	7	1	NA	NA	NA	57.770270270270274	6	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009488	Chromosome_4A	1806	1	75	42.46954595791805	0.9218048182931808	0.5436424041075204	75	0	0.5436424041075204	75	0	NA	NA	NA	1.0468821119708693	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009489	Chromosome_4A	569	2	12	36.37961335676626	0.644029428409734	95.6	12	1	95.57625145518044	11	1	95.74468085106383	1	1	93.24141659908084	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009490	Chromosome_4A	6848	4	119	34.57943925233645	0.5823066836732871	86.48937433218568	119	0.9411764705882353	92.81376518218623	15	0.9333333333333333	85.64895763281775	104	0.9423076923076923	0.5336617405582923	43	0	methylated (>=50%)	Q3T0V4	Small ribosomal subunit protein uS17 (40S ribosomal protein S11)	ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	hit with GO BP
GN009491	Chromosome_4A	5824	3	142	40.09271978021978	0.6100795677698156	2.5219844035175045	141	0	1.639344262295082	35	0	2.853881278538813	106	0	0.3473227206946454	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009492	Chromosome_4A	8205	4	154	35.39305301645338	0.5997627662649642	71.16602316602317	131	0.8625954198473282	38.92529488859764	17	0.47058823529411764	75.47268907563026	114	0.9210526315789473	1.5522875816993464	49	0	methylated (>=50%)	Q7T3B2	Heme transporter hrg1-A (zHRG-1) (Heme-responsive gene 1 protein homolog A) (HRG-1A) (Solute carrier family 48 member 1-B)	erythrocyte development [GO:0048821]; heme transport [GO:0015886]	hit with GO BP
GN009493	Chromosome_4A	1650	1	43	46.72727272727273	0.4822331575227013	44.48757763975155	43	0.5116279069767442	44.48757763975155	43	0.5116279069767442	NA	NA	NA	62.410841654778885	52	0.5576923076923077	sparse (10-50%)	O95394	Phosphoacetylglucosamine mutase (PAGM) (EC 5.4.2.3) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase-3) (PGM 3)	carbohydrate metabolic process [GO:0005975]; D-glucosamine metabolic process [GO:0006041]; hemopoiesis [GO:0030097]; protein N-linked glycosylation [GO:0006487]; protein O-linked glycosylation [GO:0006493]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	hit with GO BP
GN009494	Chromosome_4A	3602	5	119	35.61910049972238	1.042367028520291	2.2794712705691933	118	0	0.30450669914738127	32	0	2.8413028413028414	86	0	0.6175221922037823	56	0	unmethylated (<10%)	B0BNF8	Protein HTATIP2	positive regulation of programmed cell death [GO:0043068]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autophosphorylation [GO:0046777]	hit with GO BP
GN009495	Chromosome_4A	3397	3	43	34.3538416249632	0.4291384385778331	76.87793427230046	40	0.85	74.87828627069133	22	0.7272727272727273	79.91137370753323	18	1	86.8402533427164	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009496	Chromosome_4A	2313	3	19	36.057068741893644	0.2527360036805935	62.2093023255814	11	1	59.19282511210762	4	1	64.50511945392492	7	1	0.872515753756665	53	0	methylated (>=50%)	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN009497	Chromosome_4A	1201	2	43	40.54954204829309	0.8772081804593015	0.814663951120163	43	0	0.9329940627650551	37	0	0.3401360544217687	6	0	0.6657156443176415	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012000	Chromosome_4A	756	1	36	46.560846560846564	0.8938811705586758	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6951340615690169	30	0	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN009498	Chromosome_4A	1476	1	50	41.93766937669377	0.7845388442403368	0.7295719844357976	50	0	0.7295719844357976	50	0	NA	NA	NA	3.662420382165605	30	0.06666666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009499	Chromosome_4A	1750	2	56	36.68571428571428	0.9594580041315437	0.8050089445438283	56	0	0.9803921568627451	43	0	0.24875621890547264	13	0	0.6629448709002094	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009500	Chromosome_4A	327	1	20	49.235474006116206	1.0384248967926326	0	3	0	0	3	0	NA	NA	NA	1.1039558417663293	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009501	Chromosome_4A	327	1	18	49.235474006116206	0.938755980861244	9.090909090909092	1	0	9.090909090909092	1	0	NA	NA	NA	1.3106159895150722	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009502	Chromosome_4A	34278	12	833	35.67886107707567	0.7636127557485021	1.9382275168334107	758	0	1.0632014176018902	75	0	2.0272096585277954	683	0	0.9032258064516129	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009503	Chromosome_4A	1014	1	46	46.44970414201183	0.8434109648488355	0.2364066193853428	45	0	0.2364066193853428	45	0	NA	NA	NA	0.7078507078507078	48	0	unmethylated (<10%)	Q8TDV5	Glucose-dependent insulinotropic receptor (G protein-coupled receptor 119)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]	hit with GO BP
GN009504	Chromosome_4A	6153	5	87	36.92507719811474	0.41600979192166465	48.11893203883495	82	0.5121951219512195	48.06973848069738	18	0.5555555555555556	48.13477737665463	64	0.5	0.6609808102345416	62	0	sparse (10-50%)	Q9JIQ3	Diablo IAP-binding mitochondrial protein (Diablo homolog, mitochondrial) (Direct IAP-binding protein with low pI) (Second mitochondria-derived activator of caspase) (Smac) [Cleaved into: Diablo IAP-binding mitochondrial protein, cleaved form]	apoptotic signaling pathway [GO:0097190]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; neuron apoptotic process [GO:0051402]; positive regulation of apoptotic process [GO:0043065]	hit with GO BP
GN009505	Chromosome_4A	2321	4	40	32.95993106419647	0.6351334710687263	0.8719778042013476	40	0	0.6980802792321117	20	0	1.016702977487291	20	0	0.8583690987124464	44	0	unmethylated (<10%)	Q9Y2P5	Long-chain fatty acid transport protein 5 (FATP-5) (Fatty acid transport protein 5) (Bile acid-CoA ligase) (BA-CoA ligase) (BAL) (Bile acyl-CoA synthetase) (BACS) (EC 6.2.1.7) (Cholate--CoA ligase) (Fatty-acid-coenzyme A ligase, very long-chain 3) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Solute carrier family 27 member 5) (Very long-chain acyl-CoA synthetase homolog 2) (VLCS-H2) (VLCSH2) (EC 6.2.1.-) (Very long-chain acyl-CoA synthetase-related protein) (VLACS-related) (VLACSR)	bile acid and bile salt transport [GO:0015721]; bile acid biosynthetic process [GO:0006699]; bile acid metabolic process [GO:0008206]; long-chain fatty acid import into cell [GO:0044539]; long-chain fatty acid metabolic process [GO:0001676]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN009506	Chromosome_4A	12228	10	254	35.377821393523064	0.6638645062458681	0.7956353716753808	246	0	0.6652283351312478	55	0	0.8397736262398832	191	0	0.6320691949434465	77	0	unmethylated (<10%)	O14975	Long-chain fatty acid transport protein 2 (Arachidonate--CoA ligase) (EC 6.2.1.15) (Fatty acid transport protein 2) (FATP-2) (Fatty-acid-coenzyme A ligase, very long-chain 1) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Phytanate--CoA ligase) (EC 6.2.1.24) (Solute carrier family 27 member 2) (THCA-CoA ligase) (EC 6.2.1.7) (Very long-chain acyl-CoA synthetase) (VLACS) (VLCS) (EC 6.2.1.-) (Very long-chain-fatty-acid-CoA ligase)	bile acid biosynthetic process [GO:0006699]; bile acid metabolic process [GO:0008206]; fatty acid alpha-oxidation [GO:0001561]; fatty acid beta-oxidation [GO:0006635]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty-acyl-CoA biosynthetic process [GO:0046949]; long-chain fatty acid import into cell [GO:0044539]; long-chain fatty acid metabolic process [GO:0001676]; methyl-branched fatty acid metabolic process [GO:0097089]	hit with GO BP
GN009507	Chromosome_4A	7436	6	8	38.62291554599247	0.03440269216333645	1.408450704225352	7	0	4.761904761904762	2	0	0	5	0	2.042360060514372	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009508	Chromosome_4A	13717	3	324	32.99555296347598	0.8782084051208411	0.6996921354603974	240	0	0	9	0	0.7316359379572724	231	0	2.710413694721826	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009509	Chromosome_4A	1697	2	76	44.01885680612846	0.9252467860422406	0.29411764705882354	76	0	0.3523608174770965	68	0	0	8	0	1.0067114093959733	51	0	unmethylated (<10%)	Q4WBR2	Endo-1,6-beta-D-glucanase neg1 (EC 3.2.1.75) (Beta-1,6-glucanase neg1) (Glucan endo-1,6-beta-glucosidase neg1)	glucosylceramide catabolic process [GO:0006680]	hit with GO BP
GN009510	Chromosome_4A	8024	5	214	40.35393818544367	0.6757525957548625	1.7351686700271423	212	0	0.6753904601097509	59	0	2.051088461054486	153	0	1.2163336229365769	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009511	Chromosome_4A	6994	4	193	36.78867600800686	0.8162675155229924	0.9469279894296411	193	0	0.8281573498964804	33	0	0.9694746495480152	160	0	0.6361323155216285	55	0	unmethylated (<10%)	A8E627	Uridylate-specific endoribonuclease D (EC 4.6.1.-) (Protein endoU-D) (XendoU-D)	NA	hit, no GO BP
GN009512	Chromosome_4A	3059	2	104	38.4766263484799	0.9204525070161733	0.5419466724474312	100	0	0.42613636363636365	23	0	0.5628037861345613	77	0	0.5903187721369539	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017961	Chromosome_4A	1546	4	40	38.745148771021995	0.6897320930647571	2.5806451612903225	40	0	3.3333333333333335	36	0	0.3225806451612903	4	0	6.220095693779904	23	0	unmethylated (<10%)	Q3T0G1	THAP domain-containing protein 1	DNA-templated transcription [GO:0006351]; endothelial cell proliferation [GO:0001935]; regulation of DNA-templated transcription [GO:0006355]; regulation of mitotic cell cycle [GO:0007346]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009513	Chromosome_4A	14625	5	377	36.02051282051282	0.7951034505135572	1.2131058759815867	372	0	0.2245508982035928	57	0	1.3803583866269866	315	0	0.5887681159420289	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009514	Chromosome_4A	1485	1	56	41.61616161616162	0.8816326530612245	0.5596211795092553	56	0	0.5596211795092553	56	0	NA	NA	NA	0.47355958958168903	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009515	Chromosome_4A	40625	18	583	34.788923076923076	0.47430626097581863	87.36156119796304	507	0.9763313609467456	91.5810502283105	77	0.987012987012987	86.75997884200676	430	0.9744186046511628	92.38754325259515	11	1	methylated (>=50%)	Q9BVI0	PHD finger protein 20 (Glioma-expressed antigen 2) (Hepatocellular carcinoma-associated antigen 58) (Novel zinc finger protein) (Transcription factor TZP)	positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009516	Chromosome_4A	2035	3	25	34.2014742014742	0.4217791411042945	94.47513812154696	25	1	95.92592592592592	14	1	93.04029304029304	11	1	89.64912280701755	41	1	methylated (>=50%)	A2VE56	PHD finger protein 20-like protein 1	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN009517	Chromosome_4A	1269	1	47	43.183609141055946	0.7954945582586428	1.001669449081803	31	0	1.001669449081803	31	0	NA	NA	NA	1.9646365422396856	59	0	unmethylated (<10%)	Q9Y6R7	IgGFc-binding protein (Fcgamma-binding protein antigen) (FcgammaBP)	NA	hit, no GO BP
GN009518	Chromosome_4A	1269	1	44	42.868400315208824	0.7564316195895143	0.4132231404958678	40	0	0.4132231404958678	40	0	NA	NA	NA	0.5586592178770949	49	0	unmethylated (<10%)	Q9Y6R7	IgGFc-binding protein (Fcgamma-binding protein antigen) (FcgammaBP)	NA	hit, no GO BP
GN009519	Chromosome_4A	348	1	9	41.666666666666664	0.6172644856129287	0.7731958762886598	9	0	0.7731958762886598	9	0	NA	NA	NA	0.3981797497155859	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009520	Chromosome_4A	705	1	27	43.687943262411345	0.8053733869261688	0.3454231433506045	27	0	0.3454231433506045	27	0	NA	NA	NA	0.2846975088967972	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009521	Chromosome_4A	1512	1	54	42.79100529100529	0.7830290010741139	0.4192872117400419	40	0	0.4192872117400419	40	0	NA	NA	NA	1.8974566007266855	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009522	Chromosome_4A	1259	2	46	42.33518665607625	0.8175324675324676	0.46511627906976744	31	0	0.46511627906976744	31	0	NA	NA	NA	0.4336513443191674	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009523	Chromosome_4A	853	3	14	39.507620164126614	0.4210563429941471	0	3	0	0	1	0	0	2	0	0.3448275862068966	36	0	NA	B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Skeletal organic matrix MAM and LDL-receptor 2) (SOM MAM and LDL-receptor 2)	NA	hit, no GO BP
GN009524	Chromosome_4A	2907	8	41	34.46852425180599	0.47655547158947786	3.5859820700896496	39	0	3.0681818181818183	27	0	4.899135446685879	12	0	0.19646365422396855	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009525	Chromosome_4A	2570	4	46	35.36964980544747	0.5729656375708816	1.1267605633802817	42	0	2.6315789473684212	6	0	0.8762322015334063	36	0	0.1965923984272608	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009526	Chromosome_4A	21422	23	511	34.1844832415274	0.8170116234843704	0.684776200625822	454	0	0.6438113632705618	125	0	0.7008460664225281	329	0	0.3751563151313047	33	0	unmethylated (<10%)	Q58PK4	Peptidylaminoacyl-L/D-isomerase (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN009527	Chromosome_4A	5123	4	157	41.24536404450517	0.7206119249204856	0.9637544521265452	137	0	0.9636443276390714	65	0	0.963855421686747	72	0	0.7326007326007326	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009528	Chromosome_4A	11376	5	269	37.07805907172996	0.6913134676662378	0.9566082497895462	263	0	1.206140350877193	43	0	0.9161255892555368	220	0	2.3492063492063493	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009529	Chromosome_4A	42635	11	769	36.418435557640436	0.5485677392998779	81.01023017902813	759	0.922266139657444	85.88235294117646	49	0.9591836734693877	80.75380266523085	710	0.9197183098591549	83.87319090282564	32	1	methylated (>=50%)	Q6NTJ3	Serine/threonine-protein kinase greatwall (GW) (GWL) (EC 2.7.11.1) (Microtubule-associated serine/threonine-protein kinase-like) (MAST-L)	DNA damage response [GO:0006974]; G2/M transition of mitotic cell cycle [GO:0000086]; intracellular signal transduction [GO:0035556]; mitotic cell cycle [GO:0000278]; protein autophosphorylation [GO:0046777]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN009530	Chromosome_4A	28066	7	659	35.313190337062636	0.7533413329162472	1.3323524603563839	634	0.0015772870662460567	0.36496350364963503	24	0	1.3777169262365223	610	0.001639344262295082	0.5457853244390539	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009531	Chromosome_4A	43563	9	820	34.34795583407938	0.6384615607343368	1.0809113742375314	747	0	0.5322687957418496	27	0	1.10004873633642	720	0	1.3234077750206783	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009532	Chromosome_4A	357	1	9	47.338935574229694	0.45	1.6736401673640167	9	0	1.6736401673640167	9	0	NA	NA	NA	0.5866666666666667	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009533	Chromosome_4A	4736	5	67	35.15625	0.45804691447131	75.72921201567262	67	0.8059701492537313	75.53191489361703	7	0.7142857142857143	75.74211502782931	60	0.8166666666666667	6.277533039647577	21	0	methylated (>=50%)	Q9WU28	Prefoldin subunit 5 (EIG-1) (Myc modulator 1) (c-Myc-binding protein Mm-1)	negative regulation of amyloid fibril formation [GO:1905907]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of DNA-templated transcription [GO:0045892]; protein folding [GO:0006457]; retina development in camera-type eye [GO:0060041]; RNA polymerase I assembly [GO:1990113]; RNA polymerase II core complex assembly [GO:1990114]; RNA polymerase III assembly [GO:1990115]	hit with GO BP
GN009534	Chromosome_4A	24233	17	316	34.55205711220237	0.43807083408322334	89.73038192027472	316	0.990506329113924	92.79383429672447	57	1	89.31096338503745	259	0.9884169884169884	14.83160621761658	48	0.125	methylated (>=50%)	Q66HA4	Tax1-binding protein 1 homolog (Liver regeneration-related protein LRRG004)	negative regulation of apoptotic process [GO:0043066]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cytoplasmic pattern recognition receptor signaling pathway [GO:0039532]; negative regulation of interleukin-1-mediated signaling pathway [GO:2000660]; negative regulation of toll-like receptor 4 signaling pathway [GO:0034144]; negative regulation of tumor necrosis factor-mediated signaling pathway [GO:0010804]; protein localization to phagocytic vesicle [GO:1905161]	hit with GO BP
GN009535	Chromosome_4A	45306	9	710	34.41045336158566	0.5307327884386553	71.47700377406768	543	0.8802946593001841	87.25	14	0.9285714285714286	71.20327989761167	529	0.8790170132325141	47.012061403508774	57	0.5087719298245614	methylated (>=50%)	Q27567	Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic (GPD-C) (GPDH-C) (EC 1.1.1.8)	carbohydrate metabolic process [GO:0005975]; glycerol-3-phosphate catabolic process [GO:0046168]; glycerophospholipid metabolic process [GO:0006650]	hit with GO BP
GN009536	Chromosome_4A	1005	1	40	42.288557213930346	0.9043055743015251	0.321285140562249	40	0	0.321285140562249	40	0	NA	NA	NA	0.2693343593689881	53	0	unmethylated (<10%)	Q1ERI0	2-oxoglutarate-dependent dioxygenase mpl2 (EC 1.14.-.-) (Citrinin synthesis protein A)	NA	hit, no GO BP
GN009537	Chromosome_4A	414	1	11	42.028985507246375	0.6023809523809524	1.0121457489878543	11	0	1.0121457489878543	11	0	NA	NA	NA	0.4977187888842804	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009538	Chromosome_4A	18760	16	380	36.28464818763326	0.6191783744083593	89.0709918478261	353	0.9858356940509915	96.13899613899613	47	1	88.38919925512104	306	0.9836601307189542	91.33289560078792	18	1	methylated (>=50%)	P11024	NAD(P) transhydrogenase, mitochondrial (EC 7.1.1.1) (Nicotinamide nucleotide transhydrogenase) (Pyridine nucleotide transhydrogenase)	NADPH regeneration [GO:0006740]; reactive oxygen species metabolic process [GO:0072593]	hit with GO BP
GN009539	Chromosome_4A	9783	11	186	35.99100480425228	0.5873013106525377	90.51987767584097	179	0.9329608938547486	88.18332413031474	32	0.84375	90.94468426864772	147	0.9523809523809523	61.90622126877107	47	0.6382978723404256	methylated (>=50%)	P48735	Isocitrate dehydrogenase [NADP], mitochondrial (IDH) (EC 1.1.1.42) (ICD-M) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)	2-oxoglutarate metabolic process [GO:0006103]; carbohydrate metabolic process [GO:0005975]; isocitrate metabolic process [GO:0006102]; NADP+ biosynthetic process [GO:0006741]; NADP+ metabolic process [GO:0006739]; negative regulation of glial cell migration [GO:1903976]; negative regulation of glial cell proliferation [GO:0060253]; negative regulation of matrix metallopeptidase secretion [GO:1904465]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN009540	Chromosome_4A	57303	16	822	34.49557614784566	0.4842725604661298	43.16365166175852	816	0.44607843137254904	57.78798316111749	53	0.6415094339622641	42.313085672312866	763	0.4325032765399738	0.3857693956279469	49	0	sparse (10-50%)	Q9UHG0	Doublecortin domain-containing protein 2 (Protein RU2S)	cellular defense response [GO:0006968]; cilium assembly [GO:0060271]; intracellular signal transduction [GO:0035556]; neuron migration [GO:0001764]; positive regulation of smoothened signaling pathway [GO:0045880]; regulation of cilium assembly [GO:1902017]; regulation of Wnt signaling pathway [GO:0030111]; sensory perception of sound [GO:0007605]	hit with GO BP
GN009541	Chromosome_4A	12109	17	154	35.5190354281939	0.4075906681844331	96.22093023255815	13	1	94.79166666666667	2	1	96.7741935483871	11	1	NA	NA	NA	methylated (>=50%)	Q8K4L0	ATP-dependent RNA helicase DDX54 (EC 3.6.4.13) (DEAD box protein 54)	RNA metabolic process [GO:0016070]; RNA processing [GO:0006396]; rRNA processing [GO:0006364]	hit with GO BP
GN009542	Chromosome_4A	1020	1	9	39.80392156862745	0.22311337951148377	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009543	Chromosome_4A	1020	1	9	39.80392156862745	0.22311337951148377	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009544	Chromosome_4A	11913	16	149	35.532611432888444	0.4004807021961227	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q8K4L0	ATP-dependent RNA helicase DDX54 (EC 3.6.4.13) (DEAD box protein 54)	RNA metabolic process [GO:0016070]; RNA processing [GO:0006396]; rRNA processing [GO:0006364]	hit with GO BP
GN009545	Chromosome_4A	39229	3	1060	36.61067067730505	0.8063891443514437	16.260987153482084	963	0.12357217030114226	74.71929227628445	52	0.7884615384615384	12.63226814792912	911	0.08562019758507135	0.6045949214026602	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016041	Chromosome_4A	213	1	12	54.460093896713616	0.7654986522911051	0	12	0	0	12	0	NA	NA	NA	2.025111381125962	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009546	Chromosome_4A	867	1	39	43.483275663206456	1.005142687277051	0.532724505327245	39	0	0.532724505327245	39	0	NA	NA	NA	0.3206709422792304	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002280	Chromosome_4A	1328	2	39	43.825301204819276	0.6117936117936118	1.075268817204301	9	0	1.075268817204301	9	0	NA	NA	NA	0.7692307692307693	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009547	Chromosome_4A	648	1	18	40.123456790123456	0.695154657607724	0.8064516129032258	18	0	0.8064516129032258	18	0	NA	NA	NA	0.20289119959421761	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009548	Chromosome_4A	426	1	13	42.48826291079812	0.744955609362389	0.5822416302765647	13	0	0.5822416302765647	13	0	NA	NA	NA	0.6103437198843559	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009549	Chromosome_4A	432	1	8	44.44444444444444	0.3783251231527094	0	8	0	0	8	0	NA	NA	NA	2.1164021164021163	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009550	Chromosome_4A	477	1	11	40.880503144654085	0.5552380952380952	0.19455252918287938	11	0	0.19455252918287938	11	0	NA	NA	NA	1.2411347517730495	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009551	Chromosome_4A	1098	1	41	39.61748633879781	0.9578297872340426	0.6381620931716656	41	0	0.6381620931716656	41	0	NA	NA	NA	0.7417873542917697	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009552	Chromosome_4A	1400	3	47	45.642857142857146	0.645743782998685	1.5384615384615385	38	0	1.5384615384615385	38	0	NA	NA	NA	0.5505308690523004	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009553	Chromosome_4A	348	1	1	45.97701149425287	0.07021791767554479	NA	0	NA	NA	NA	NA	NA	NA	NA	0.484027105517909	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009554	Chromosome_4A	11667	6	123	34.52472786491815	0.3556332556910228	84.95177698507068	123	0.8943089430894309	71.1340206185567	20	0.5	86.75328554360813	103	0.970873786407767	0.8426966292134831	58	0	methylated (>=50%)	P30568	Glutathione S-transferase A (GST-A) (EC 2.5.1.18) (GST class-theta)	glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]	hit with GO BP
GN009555	Chromosome_4A	6584	6	211	36.482381530984206	0.963349391190623	5.0234546642123385	211	0	0.5055611729019212	17	0	5.305324249306081	194	0	4.557935200439319	56	0.017857142857142856	unmethylated (<10%)	P30568	Glutathione S-transferase A (GST-A) (EC 2.5.1.18) (GST class-theta)	glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]	hit with GO BP
GN009556	Chromosome_4A	8024	7	144	34.22233300099701	0.6138816382630446	8.254716981132075	140	0	7.969639468690702	28	0	8.316263826300696	112	0	9.929078014184396	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009557	Chromosome_4A	2194	4	64	38.78760255241568	0.7768777940069933	0.5689900426742532	64	0	0.5773672055427251	26	0	0.5652620760534429	38	0	0.7923930269413629	15	0	unmethylated (<10%)	Q3B8D7	Dynein light chain Tctex-type 5-A (Tctex1 domain-containing protein 1-A)	microtubule-based movement [GO:0007018]	hit with GO BP
GN009558	Chromosome_4A	30180	18	318	33.9662027833002	0.3743607998927148	87.04635188490454	314	0.9713375796178344	89.81181051265412	61	0.9508196721311475	86.4931524631661	253	0.9762845849802372	2.5977653631284916	56	0	methylated (>=50%)	P78524	DENN domain-containing protein 2B (HeLa tumor suppression 1) (Suppression of tumorigenicity 5 protein)	positive regulation of ERK1 and ERK2 cascade [GO:0070374]	hit with GO BP
GN016778	Chromosome_4A	1527	3	29	38.89980353634578	0.5033074195308238	90.60895084372707	29	1	89.94974874371859	14	1	91.12271540469973	15	1	61.38228941684665	30	0.7	methylated (>=50%)	Q00454	Large ribosomal subunit protein uL15 (60S ribosomal protein L27a)	translation [GO:0006412]	hit with GO BP
GN009559	Chromosome_4A	14552	7	252	34.81995601979109	0.5775703672436957	45.39420631474474	244	0.3237704918032787	42.02643171806167	22	0.2727272727272727	45.649272654477514	222	0.32882882882882886	3.704690831556503	69	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009560	Chromosome_4A	1295	2	74	49.034749034749034	0.951166253101737	1.16751269035533	71	0	1.16751269035533	71	0	NA	NA	NA	0.7005253940455342	69	0	unmethylated (<10%)	P12812	Major egg antigen (p40)	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN009561	Chromosome_4A	2211	6	33	38.6250565355043	0.40073487007958347	45.066836409929984	33	0.5454545454545454	73.83918459796149	22	0.7727272727272727	8.13953488372093	11	0.09090909090909091	0.43640897755610975	27	0	sparse (10-50%)	A0A1B0GTJ6	Stabilizer of axonemal microtubules 3	NA	hit, no GO BP
GN009562	Chromosome_4A	21467	9	312	34.587972236455954	0.4866387138568687	87.55272143000603	311	0.9292604501607717	78.82534775888718	26	0.8461538461538461	88.15916657716679	285	0.9368421052631579	0.6610576923076923	25	0	methylated (>=50%)	Q3UE31	Uncharacterized protein KIAA0930 homolog	NA	hit, no GO BP
GN009563	Chromosome_4A	576	1	10	44.44444444444444	0.3533092068944366	NA	0	NA	NA	NA	NA	NA	NA	NA	86.95402298850574	26	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009564	Chromosome_4A	1686	5	7	34.57888493475682	0.1398805290854786	0.39777247414478917	6	0	0.39777247414478917	6	0	NA	NA	NA	0.40338846308995563	51	0	unmethylated (<10%)	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN009565	Chromosome_4A	216	1	7	44.44444444444444	0.6608391608391608	0.373134328358209	7	0	0.373134328358209	7	0	NA	NA	NA	0.43848336342532884	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009566	Chromosome_4A	10941	5	308	34.5032446759894	0.9459309699010174	0.7046691492409052	306	0	0.31413612565445026	18	0	0.7272727272727273	288	0	2.717900656044986	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009567	Chromosome_4A	30164	30	425	36.68280068956372	0.42329687699972834	75.8085151752079	424	0.8820754716981132	79.48164146868251	122	0.9262295081967213	74.9047914268001	302	0.8642384105960265	84.33235867446393	60	0.9833333333333333	methylated (>=50%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN009568	Chromosome_4A	4387	3	47	34.78459083656257	0.35582649512912773	90.91233071988596	47	1	84.52012383900929	7	1	91.74385823600483	40	1	93.9580764488286	24	1	methylated (>=50%)	P48445	Biotin--protein ligase (EC 6.3.4.-) (Biotin apo-protein ligase) [Includes: Biotin--[methylmalonyl-CoA-carboxytransferase] ligase (EC 6.3.4.9); Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase (EC 6.3.4.10) (Holocarboxylase synthetase) (HCS); Biotin--[methylcrotonoyl-CoA-carboxylase] ligase (EC 6.3.4.11); Biotin--[acetyl-CoA-carboxylase] ligase (EC 6.3.4.15)]	NA	hit, no GO BP
GN009569	Chromosome_4A	26673	6	440	36.572564016046186	0.49368575809392806	86.64819157251475	392	0.9617346938775511	78.60696517412936	11	0.9090909090909091	86.82423846349344	381	0.963254593175853	21.14590920126244	55	0.18181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009570	Chromosome_4A	4997	8	69	34.62077246347809	0.4616141560978353	46.01990049751244	56	0.42857142857142855	46.9984607491021	35	0.4	44.514601420678765	21	0.47619047619047616	3.094825451844516	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009571	Chromosome_4A	14488	10	155	35.86416344561016	0.3333715351859846	91.49279414927942	153	0.9869281045751634	96.55430711610487	29	1	90.64422956172297	124	0.9838709677419355	80.22598870056497	35	0.9428571428571428	methylated (>=50%)	Q8N3X1	Formin-binding protein 4 (Formin-binding protein 30)	NA	hit, no GO BP
GN009572	Chromosome_4A	834	2	9	37.52997601918465	0.32211827310960434	95	9	1	96.21052631578948	8	1	88.23529411764706	1	1	91.41104294478528	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002497	Chromosome_4A	837	2	8	33.930704898446834	0.33408172429277055	26.666666666666668	1	0	26.666666666666668	1	0	NA	NA	NA	1.1489698890649762	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009573	Chromosome_4A	309	1	8	43.689320388349515	0.5425812115891132	0.44052863436123346	8	0	0.44052863436123346	8	0	NA	NA	NA	0.5544554455445545	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012540	Chromosome_4A	306	1	3	42.810457516339866	0.21428571428571427	0.5952380952380952	3	0	0.5952380952380952	3	0	NA	NA	NA	0.5148005148005148	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009574	Chromosome_4A	594	1	3	39.225589225589225	0.13170731707317074	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009575	Chromosome_4A	639	1	3	39.436619718309856	0.12136752136752137	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009576	Chromosome_4A	402	1	15	44.776119402985074	0.75375	2.4475524475524475	15	0	2.4475524475524475	15	0	NA	NA	NA	1.937984496124031	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009577	Chromosome_4A	876	1	21	38.470319634703195	0.6486143431351808	46.13180515759312	21	0.38095238095238093	46.13180515759312	21	0.38095238095238093	NA	NA	NA	38.65664631282292	36	0.3611111111111111	sparse (10-50%)	Q5HZI9	Mitochondrial nicotinamide adenine dinucleotide transporter SLC25A51 (Mitochondrial NAD(+) transporter SLC25A51) (Mitochondrial carrier triple repeat protein 1) (Solute carrier family 25 member 51)	aerobic electron transport chain [GO:0019646]; mitochondrial NAD transmembrane transport [GO:1990549]; NAD+ biosynthetic process via the salvage pathway [GO:0034355]	hit with GO BP
GN009578	Chromosome_4A	467	2	9	37.687366167023555	0.547265625	87.32897085068412	9	1	83.68495077355837	5	1	90	4	1	92.34006734006734	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009579	Chromosome_4A	1578	3	12	35.42458808618505	0.24383836822993124	15.005727376861397	12	0	14.499121265377855	8	0	15.953947368421053	4	0	11.123133520882925	27	0	sparse (10-50%)	P71359	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN009580	Chromosome_4A	579	1	4	37.47841105354059	0.19693877551020408	9.266409266409266	4	0	9.266409266409266	4	0	NA	NA	NA	19.012738853503183	23	0.17391304347826086	NA	NA	NA	NA	no Swiss-Prot hit
GN009581	Chromosome_4A	1653	1	21	38.53599516031458	0.3470050781718581	38.89127632144392	21	0.19047619047619047	38.89127632144392	21	0.19047619047619047	NA	NA	NA	50.45825360056401	55	0.5818181818181818	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009582	Chromosome_4A	1813	2	19	36.569222283508	0.31366782006920413	33.87978142076503	19	0.2631578947368421	35.298804780876495	18	0.2777777777777778	25.358851674641148	1	0	41.845318860244234	29	0.20689655172413793	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009583	Chromosome_4A	426	1	15	42.95774647887324	0.7634408602150538	0.48674959437533805	14	0	0.48674959437533805	14	0	NA	NA	NA	0.5300353356890459	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009584	Chromosome_4A	195	1	8	51.794871794871796	0.6295399515738499	1.8648018648018647	8	0	1.8648018648018647	8	0	NA	NA	NA	0.9554140127388535	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009585	Chromosome_4A	939	1	32	38.12566560170394	0.9378277153558052	0.6587615283267457	32	0	0.6587615283267457	32	0	NA	NA	NA	0.8910212474297464	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009586	Chromosome_4A	408	1	19	40.931372549019606	1.1373239436619718	NA	0	NA	NA	NA	NA	NA	NA	NA	85.60057887120115	25	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009587	Chromosome_4A	723	1	20	40.387275242047025	0.6913367756741251	94.66437177280551	20	1	94.66437177280551	20	1	NA	NA	NA	92.66192437289405	55	0.9818181818181818	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009588	Chromosome_4A	1046	2	29	38.814531548757174	0.7456735496558505	97.16312056737588	8	1	96.1038961038961	4	1	98.4375	4	1	89.78599221789884	40	0.975	methylated (>=50%)	Q8N414	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac domain-related protein 5) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN009589	Chromosome_4A	312	1	4	42.94871794871795	0.27956989247311825	97.88732394366197	4	1	97.88732394366197	4	1	NA	NA	NA	87.98798798798799	34	1	NA	Q13705	Activin receptor type-2B (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB)	activin receptor signaling pathway [GO:0032924]; anterior/posterior pattern specification [GO:0009952]; artery development [GO:0060840]; blood vessel remodeling [GO:0001974]; BMP signaling pathway [GO:0030509]; cell surface receptor protein serine/threonine kinase signaling pathway [GO:0007178]; cellular response to growth factor stimulus [GO:0071363]; intracellular iron ion homeostasis [GO:0006879]; lymphangiogenesis [GO:0001946]; lymphatic endothelial cell differentiation [GO:0060836]; negative regulation of adipose tissue development [GO:1904178]; negative regulation of cold-induced thermogenesis [GO:0120163]; negative regulation of ossification [GO:0030279]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pattern specification process [GO:0007389]; positive regulation of activin receptor signaling pathway [GO:0032927]; positive regulation of bone mineralization [GO:0030501]; positive regulation of osteoblast differentiation [GO:0045669]; regulation of DNA-templated transcription [GO:0006355]; retina vasculature development in camera-type eye [GO:0061298]; signal transduction [GO:0007165]; trophoblast cell migration [GO:0061450]; venous blood vessel development [GO:0060841]	hit with GO BP
GN009590	Chromosome_4A	613	2	19	43.06688417618271	0.6715677795075823	6.184210526315789	19	0	5.029585798816568	18	0	15.476190476190476	1	0	10.581456259821897	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009591	Chromosome_4A	2927	3	76	34.062179706183805	0.8957341773171301	76.85548700691719	76	0.7763157894736842	64.42721791559	24	0.5416666666666666	80.30085959885386	52	0.8846153846153846	12.393822393822393	51	0.1568627450980392	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009592	Chromosome_4A	2690	3	73	36.50557620817844	0.8149485391766268	0.8975317875841436	73	0	0.8075842696629213	50	0	1.117798796216681	23	0	0.6469500924214417	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015658	Chromosome_4A	324	1	11	39.19753086419753	0.9041095890410958	0.1545595054095827	11	0	0.1545595054095827	11	0	NA	NA	NA	0.8736349453978159	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009593	Chromosome_4A	753	1	2	51.66002656042497	0.040063846767757386	0	1	0	0	1	0	NA	NA	NA	4.200626959247649	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009594	Chromosome_4A	735	3	3	34.285714285714285	0.13976926977687626	0.4694835680751174	3	0	0	2	0	1.2195121951219512	1	0	0.4963898916967509	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009595	Chromosome_4A	639	1	3	39.436619718309856	0.12136752136752137	NA	0	NA	NA	NA	NA	NA	NA	NA	17.293233082706767	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009596	Chromosome_4A	15464	6	309	36.02560786342473	0.6169093183675525	92.03398300849575	309	0.9870550161812298	95.22900763358778	9	1	91.94806527763522	300	0.9866666666666667	87.8556557945871	52	1	methylated (>=50%)	P43332	U1 small nuclear ribonucleoprotein A (U1 snRNP A) (U1-A) (U1A) (Sex determination protein snf)	female germ-line sex determination [GO:0019099]; mRNA splicing, via spliceosome [GO:0000398]; oogenesis [GO:0048477]; primary sex determination, soma [GO:0007539]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; RNA splicing [GO:0008380]	hit with GO BP
GN009597	Chromosome_4A	375	1	22	45.86666666666667	1.1192511192511192	94.35612082670906	22	1	94.35612082670906	22	1	NA	NA	NA	88.96522112494632	74	0.9594594594594594	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009598	Chromosome_4A	213	1	1	48.82629107981221	0.08179723502304148	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009599	Chromosome_4A	267	1	20	55.43071161048689	0.9796367638965328	1.4354066985645932	10	0	1.4354066985645932	10	0	NA	NA	NA	0.7779772591262717	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009600	Chromosome_4A	2490	1	78	41.726907630522085	0.7437446867173678	0.42168674698795183	77	0	0.42168674698795183	77	0	NA	NA	NA	0.8966493629070316	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009601	Chromosome_4A	3277	5	50	39.7009459871834	0.3872533726613536	0.436442989634479	47	0	0.41279669762641896	25	0	0.46296296296296297	22	0	0.42232277526395173	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009602	Chromosome_4A	8295	10	226	37.20313441832429	0.7973027285312374	0.6612410986775178	226	0	0.5196032120925839	99	0	0.7405448294102089	127	0	0.5317263381779511	49	0	unmethylated (<10%)	Q20191	Zinc metalloproteinase nas-13 (EC 3.4.24.-) (Nematode astacin 13)	proteolysis [GO:0006508]	hit with GO BP
GN009603	Chromosome_4A	519	1	6	51.445086705202314	0.19548022598870057	0	6	0	0	6	0	NA	NA	NA	5.012098167991704	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009604	Chromosome_4A	524	2	13	40.0763358778626	0.6192727272727273	0.36991368680641185	13	0	0.36991368680641185	13	0	NA	NA	NA	0.5437642518856342	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009605	Chromosome_4A	2807	5	78	37.976487353045954	0.7707629266644137	1.0298389226300502	78	0	0.9918845807033363	23	0	1.0455563853622105	55	0	0.9656004828002414	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009606	Chromosome_4A	15644	11	169	35.32983891587829	0.34847014227004686	86.40736526326678	168	0.9702380952380952	86.32872503840245	11	1	86.41304347826087	157	0.9681528662420382	48.36942992282798	56	0.4642857142857143	methylated (>=50%)	Q3T0R7	3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) (Acetyl-CoA acetyltransferase) (EC 2.3.1.9) (Acetyl-CoA acyltransferase) (Acyl-CoA hydrolase, mitochondrial) (EC 3.1.2.-, EC 3.1.2.1, EC 3.1.2.2) (Beta-ketothiolase) (Mitochondrial 3-oxoacyl-CoA thiolase)	fatty acid beta-oxidation [GO:0006635]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]	hit with GO BP
GN009607	Chromosome_4A	26921	10	274	33.691170461721335	0.3591681974161679	83.70971709717097	272	0.9632352941176471	90.42076991942703	16	1	83.31945022907122	256	0.9609375	91.37254901960785	60	1	methylated (>=50%)	Q9VVK7	Nucleobindin [Cleaved into: Nesfatin-1]	carbohydrate metabolic process [GO:0005975]; defense response to Gram-negative bacterium [GO:0050829]; insemination [GO:0007320]	hit with GO BP
GN009608	Chromosome_4A	2807	7	80	36.44460277876737	0.8594282215163228	0.4423691324649791	80	0	0.4715127701375246	53	0	0.3937007874015748	27	0	0.37860861334595364	53	0	unmethylated (<10%)	C7G0B5	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]	NA	hit, no GO BP
GN009609	Chromosome_4A	519	1	10	51.05973025048169	0.3158086893026652	0	2	0	0	2	0	NA	NA	NA	0.5633802816901409	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009610	Chromosome_4A	9354	19	211	34.94761599315801	0.7389239688840069	0.7090971982013144	211	0	0.7727101394647569	110	0	0.655161393416427	101	0	0.6277695716395865	46	0	unmethylated (<10%)	Q20930	Metalloprotease mig-17 (EC 3.4.24.-) (Abnormal cell migration protein 17)	gonad morphogenesis [GO:0035262]; intracellular protein localization [GO:0008104]; protein autoprocessing [GO:0016540]; regulation of cell migration [GO:0030334]; regulation of distal tip cell migration [GO:1903354]; zymogen activation [GO:0031638]	hit with GO BP
GN009611	Chromosome_4A	546	1	19	43.772893772893774	0.7373134328358208	3.7344398340248963	19	0	3.7344398340248963	19	0	NA	NA	NA	0.5975395430579965	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009612	Chromosome_4A	664	2	22	53.31325301204819	0.46651550474243925	0	4	0	0	3	0	0	1	0	1.561216105176664	64	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009613	Chromosome_4A	339	1	6	57.227138643067846	0.22147212543554007	0	1	0	0	1	0	NA	NA	NA	0	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009614	Chromosome_4A	330	1	7	41.515151515151516	0.49295774647887325	0	7	0	0	7	0	NA	NA	NA	0.28957528957528955	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009615	Chromosome_4A	2800	2	80	40.57142857142857	0.6957645334029098	1.6194331983805668	26	0	0.8928571428571429	10	0	1.9342359767891684	16	0	0.9470512268618166	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009616	Chromosome_4A	1701	1	33	42.857142857142854	0.42474159717913407	0.8281573498964804	20	0	0.8281573498964804	20	0	NA	NA	NA	0.6211180124223602	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009617	Chromosome_4A	1646	3	53	40.826245443499396	0.7747120516486542	0	8	0	0	6	0	0	2	0	13.130223779994608	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009618	Chromosome_4A	1392	1	31	53.23275862068966	0.3151437251694321	0.6896551724137931	10	0	0.6896551724137931	10	0	NA	NA	NA	0.8142116950407106	97	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009619	Chromosome_4A	15367	9	449	35.17928027591592	0.94444697673699185	2.293927279649724	434	0	0.8064516129032258	34	0	2.449022493167963	400	0	0.6510416666666666	26	0	unmethylated (<10%)	Q6DHQ1	Voltage-gated hydrogen channel 1 (Hydrogen voltage-gated channel 1) (HV1)	cellular response to pH [GO:0071467]; cellular response to zinc ion [GO:0071294]; proton transmembrane transport [GO:1902600]; response to zinc ion [GO:0010043]	hit with GO BP
GN009620	Chromosome_4A	810	1	7	43.20987654320987	0.21694214876033058	1.1363636363636365	5	0	1.1363636363636365	5	0	NA	NA	NA	0.4995004995004995	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009621	Chromosome_4A	285	1	8	47.01754385964912	0.658008658008658	0	3	0	0	3	0	NA	NA	NA	0.8817635270541082	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009622	Chromosome_4A	1542	1	52	39.81841763942931	0.8584275436793423	0.40792540792540793	52	0	0.40792540792540793	52	0	NA	NA	NA	2.746066029003394	49	0	unmethylated (<10%)	Q8N0W4	Neuroligin-4, X-linked (Neuroligin X) (HNLX)	adult behavior [GO:0030534]; brainstem development [GO:0003360]; cell-cell junction organization [GO:0045216]; cerebellum development [GO:0021549]; learning [GO:0007612]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of excitatory postsynaptic potential [GO:0090394]; neuron cell-cell adhesion [GO:0007158]; neuron differentiation [GO:0030182]; organ growth [GO:0035265]; presynapse assembly [GO:0099054]; presynaptic membrane assembly [GO:0097105]; regulation of synapse assembly [GO:0051963]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; synapse organization [GO:0050808]; vocalization behavior [GO:0071625]	hit with GO BP
GN009623	Chromosome_4A	1301	4	21	34.66564181398924	0.5405389363722697	0.38022813688212925	21	0	0.5328596802841918	12	0	0.20449897750511248	9	0	1.2243113248797552	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009624	Chromosome_4A	657	1	28	42.61796042617961	0.9397701149425287	0	28	0	0	28	0	NA	NA	NA	11.910851297040555	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009625	Chromosome_4A	4758	3	125	36.38083228247163	0.7955372334164429	2.2104757328207594	125	0	1.8138801261829653	30	0	2.3115577889447234	95	0	0.541097655243494	60	0	unmethylated (<10%)	Q5T4F7	Secreted frizzled-related protein 5 (sFRP-5) (Frizzled-related protein 1b) (FRP-1b) (Secreted apoptosis-related protein 3) (SARP-3)	anatomical structure morphogenesis [GO:0009653]; apoptotic process [GO:0006915]; canonical Wnt signaling pathway [GO:0060070]; digestive tract morphogenesis [GO:0048546]; establishment or maintenance of cell polarity [GO:0007163]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of Wnt signaling pathway [GO:0030178]; non-canonical Wnt signaling pathway [GO:0035567]; regulation of transcription by RNA polymerase II [GO:0006357]; signal transduction [GO:0007165]; visual perception [GO:0007601]	hit with GO BP
GN009626	Chromosome_4A	21866	18	267	34.97210280801244	0.400131453056592	74.16796671866875	265	0.7886792452830189	75.06234413965088	19	0.8947368421052632	74.0920950567661	246	0.7804878048780488	48.86185243328101	37	0.4864864864864865	methylated (>=50%)	O96019	Actin-like protein 6A (53 kDa BRG1-associated factor A) (Actin-related protein Baf53a) (ArpNbeta) (BRG1-associated factor 53A) (BAF53A) (INO80 complex subunit K)	chromatin remodeling [GO:0006338]; negative regulation of cell differentiation [GO:0045596]; nervous system development [GO:0007399]; neural retina development [GO:0003407]; positive regulation of cell differentiation [GO:0045597]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of T cell differentiation [GO:0045582]; positive regulation of telomere maintenance in response to DNA damage [GO:1904507]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of chromosome organization [GO:0033044]; regulation of DNA replication [GO:0006275]; regulation of DNA strand elongation [GO:0060382]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair [GO:2000779]; regulation of embryonic development [GO:0045995]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]; signal transduction [GO:0007165]; spinal cord development [GO:0021510]; telomere maintenance [GO:0000723]	hit with GO BP
GN009627	Chromosome_4A	861	1	10	41.11498257839721	0.2860085038533085	88.69969040247678	10	1	88.69969040247678	10	1	NA	NA	NA	47.01926016508713	52	0.40384615384615385	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009628	Chromosome_4A	25428	14	354	35.21708352996696	0.45348727547082207	90.3739100448298	349	0.9914040114613181	93.62776025236593	112	0.9910714285714286	89.37853834276892	237	0.9915611814345991	50.4302925989673	13	0.46153846153846156	methylated (>=50%)	O75581	Low-density lipoprotein receptor-related protein 6 (LRP-6)	canonical Wnt signaling pathway [GO:0060070]; cell-cell adhesion [GO:0098609]; cellular response to cholesterol [GO:0071397]; chemical synaptic transmission [GO:0007268]; dopaminergic neuron differentiation [GO:0071542]; midbrain dopaminergic neuron differentiation [GO:1904948]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; nervous system development [GO:0007399]; neural crest cell differentiation [GO:0014033]; neural crest formation [GO:0014029]; positive regulation of cell cycle [GO:0045787]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to plasma membrane [GO:0072659]; response to peptide hormone [GO:0043434]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN009629	Chromosome_4A	168	1	3	49.404761904761905	0.3054545454545455	21.9959266802444	3	0	21.9959266802444	3	0	NA	NA	NA	5.425531914893617	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009630	Chromosome_4A	3968	4	69	36.819556451612904	0.513093832574352	1.102072946733141	69	0	1.5217391304347827	28	0	0.8638420403126286	41	0	9.473365617433414	43	0	unmethylated (<10%)	O88572	Low-density lipoprotein receptor-related protein 6 (LRP-6)	anterior/posterior pattern specification [GO:0009952]; axis elongation [GO:0003401]; axis elongation involved in somitogenesis [GO:0090245]; bone remodeling [GO:0046849]; branching involved in mammary gland duct morphogenesis [GO:0060444]; canonical Wnt signaling pathway [GO:0060070]; cell migration involved in gastrulation [GO:0042074]; cell-cell adhesion [GO:0098609]; cellular response to cholesterol [GO:0071397]; cerebellum morphogenesis [GO:0021587]; cerebral cortex cell migration [GO:0021795]; cerebral cortex development [GO:0021987]; chemical synaptic transmission [GO:0007268]; convergent extension [GO:0060026]; dopaminergic neuron differentiation [GO:0071542]; dorsal/ventral axis specification [GO:0009950]; embryonic camera-type eye morphogenesis [GO:0048596]; embryonic digit morphogenesis [GO:0042733]; embryonic forelimb morphogenesis [GO:0035115]; embryonic hindlimb morphogenesis [GO:0035116]; embryonic limb morphogenesis [GO:0030326]; embryonic pattern specification [GO:0009880]; embryonic retina morphogenesis in camera-type eye [GO:0060059]; establishment of blood-brain barrier [GO:0060856]; establishment of blood-retinal barrier [GO:1990963]; external genitalia morphogenesis [GO:0035261]; face morphogenesis [GO:0060325]; forebrain development [GO:0030900]; forebrain generation of neurons [GO:0021872]; forebrain radial glial cell differentiation [GO:0021861]; formation of radial glial scaffolds [GO:0021943]; gastrulation with mouth forming second [GO:0001702]; generation of neurons [GO:0048699]; heart looping [GO:0001947]; limb morphogenesis [GO:0035108]; mammary gland duct morphogenesis [GO:0060603]; mammary placode formation [GO:0060596]; midbrain development [GO:0030901]; midbrain-hindbrain boundary development [GO:0030917]; negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; nervous system development [GO:0007399]; neural crest cell differentiation [GO:0014033]; neural crest formation [GO:0014029]; neural tube closure [GO:0001843]; neural tube development [GO:0021915]; Norrin signaling pathway [GO:0110135]; odontogenesis of dentin-containing tooth [GO:0042475]; pericardium morphogenesis [GO:0003344]; positive regulation of apoptotic process [GO:0043065]; positive regulation of bone resorption [GO:0045780]; positive regulation of cell cycle [GO:0045787]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of mesenchymal cell proliferation [GO:0002053]; positive regulation of neuron projection development [GO:0010976]; positive regulation of ossification [GO:0045778]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-anal tail morphogenesis [GO:0036342]; primitive streak formation [GO:0090009]; protein localization to plasma membrane [GO:0072659]; receptor-mediated endocytosis involved in cholesterol transport [GO:0090118]; regulation of cell development [GO:0060284]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; response to folic acid [GO:0051593]; retina morphogenesis in camera-type eye [GO:0060042]; roof of mouth development [GO:0060021]; skeletal system morphogenesis [GO:0048705]; somitogenesis [GO:0001756]; thalamus development [GO:0021794]; trachea cartilage morphogenesis [GO:0060535]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN009631	Chromosome_4A	1459	2	49	39.82179575051405	0.8537258180081204	1.0539367637941723	49	0	0.5457025920873124	30	0	1.4772727272727273	19	0	0.9362621534029528	66	0	unmethylated (<10%)	O75581	Low-density lipoprotein receptor-related protein 6 (LRP-6)	canonical Wnt signaling pathway [GO:0060070]; cell-cell adhesion [GO:0098609]; cellular response to cholesterol [GO:0071397]; chemical synaptic transmission [GO:0007268]; dopaminergic neuron differentiation [GO:0071542]; midbrain dopaminergic neuron differentiation [GO:1904948]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; nervous system development [GO:0007399]; neural crest cell differentiation [GO:0014033]; neural crest formation [GO:0014029]; positive regulation of cell cycle [GO:0045787]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to plasma membrane [GO:0072659]; response to peptide hormone [GO:0043434]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN009632	Chromosome_4A	1582	2	14	38.24273072060683	0.24326699178419225	95.16129032258064	14	1	91.37931034482759	4	1	96.63677130044843	10	1	35.91160220994475	32	0.3125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009633	Chromosome_4A	3688	6	135	39.58785249457701	0.9348524905365619	0.6105968091392555	135	0	0.6530612244897959	64	0	0.5709935287400076	71	0	1.0027347310847767	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009634	Chromosome_4A	8235	7	195	35.1183970856102	0.7680947643327944	1.9603267211201867	182	0	0.3508771929824561	27	0	2.2072678331090176	155	0	0.5340453938584779	38	0	unmethylated (<10%)	Q8BYF6	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; monocarboxylic acid transport [GO:0015718]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; short-chain fatty acid transmembrane transport [GO:0015913]; sodium ion transport [GO:0006814]	hit with GO BP
GN009635	Chromosome_4A	354	1	16	44.067796610169495	0.9385252692626346	0.2604166666666667	16	0	0.2604166666666667	16	0	NA	NA	NA	0.23264831329972857	58	0	unmethylated (<10%)	Q5BL81	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]	hit with GO BP
GN009636	Chromosome_4A	1743	4	21	31.78427997705106	0.4795425067798609	14.873200822481152	18	0	22.29038854805726	7	0	11.1340206185567	11	0	15.84938704028021	27	0.07407407407407407	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009637	Chromosome_4A	1340	2	48	38.208955223880594	0.9829451677975426	0.41455550437586364	48	0	0.41455550437586364	48	0	NA	NA	NA	9.132581100141044	39	0.1794871794871795	unmethylated (<10%)	Q9D306	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C (EC 2.4.1.145) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVc) (GnT-IVc) (N-acetylglucosaminyltransferase IVc) (UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVc)	protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN009638	Chromosome_4A	231	1	0	41.99134199134199	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4554794520547945	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009639	Chromosome_4A	948	1	31	42.29957805907173	0.7311539035676967	0.47438330170777987	31	0	0.47438330170777987	31	0	NA	NA	NA	0.968421052631579	32	0	unmethylated (<10%)	Q9VCZ3	Octopamine receptor beta-1R (DmOA2) (DmOct-beta-1R)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; negative regulation of synaptic assembly at neuromuscular junction [GO:0045886]; positive regulation of MAPK cascade [GO:0043410]	hit with GO BP
GN009640	Chromosome_4A	456	1	12	49.56140350877193	0.429075511644319	0	5	0	0	5	0	NA	NA	NA	0.723589001447178	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009641	Chromosome_4A	1077	1	38	39.09006499535747	0.9236289776574137	0.8004574042309891	38	0	0.8004574042309891	38	0	NA	NA	NA	0.8045292014302742	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009642	Chromosome_4A	1248	1	35	38.70192307692308	0.7490225667055354	0.7990165949600492	35	0	0.7990165949600492	35	0	NA	NA	NA	1.6048910966755827	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009643	Chromosome_4A	1146	1	33	38.30715532286213	0.7948297604035309	0.3799873337555415	33	0	0.3799873337555415	33	0	NA	NA	NA	0.5716463414634146	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009644	Chromosome_4A	630	1	23	43.80952380952381	0.7648859797297297	0.6993006993006993	23	0	0.6993006993006993	23	0	NA	NA	NA	0.7346585998271391	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009645	Chromosome_4A	1051	2	17	39.10561370123692	0.4249191400304414	17.106652587117214	17	0	19.9438202247191	10	0	8.51063829787234	7	0	13.782274947662247	32	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009646	Chromosome_4A	22417	15	507	33.80024088861132	0.7930995140255158	3.1174480425326245	503	0	2.3285899094437257	66	0	3.2117183272783487	437	0	0.7601351351351351	39	0	unmethylated (<10%)	Q61245	Collagen alpha-1(XI) chain	cartilage condensation [GO:0001502]; cartilage development [GO:0051216]; chondrocyte development [GO:0002063]; collagen fibril organization [GO:0030199]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; embryonic skeletal system morphogenesis [GO:0048704]; endodermal cell differentiation [GO:0035987]; heart morphogenesis [GO:0003007]; inner ear morphogenesis [GO:0042472]; proteoglycan metabolic process [GO:0006029]; sensory perception of sound [GO:0007605]; skeletal system morphogenesis [GO:0048705]; tendon development [GO:0035989]; ventricular cardiac muscle tissue morphogenesis [GO:0055010]; visual perception [GO:0007601]	hit with GO BP
GN009647	Chromosome_4A	306	1	8	45.42483660130719	0.508939708939709	1.2578616352201257	8	0	1.2578616352201257	8	0	NA	NA	NA	0.7729468599033816	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009648	Chromosome_4A	27636	16	424	36.66232450426979	0.45827843422911646	88.6254852447895	419	0.9761336515513126	93.52828379674017	43	1	88.20714198061111	376	0.973404255319149	89.67337512372154	39	1	methylated (>=50%)	Q7ZY18	Zygotic DNA replication licensing factor mcm6-B (EC 3.6.4.12) (Zygotic minichromosome maintenance protein 6-B) (zMCM6-B) (zMCM6b)	DNA replication initiation [GO:0006270]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication [GO:1902969]; premeiotic DNA replication [GO:0006279]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN009649	Chromosome_4A	12507	11	142	33.10146318061885	0.41505165611077993	86.38426626323752	141	0.9219858156028369	88.58585858585859	14	1	86.15689547256416	127	0.9133858267716536	0.4009355162044771	53	0	methylated (>=50%)	Q6P6R0	Protein lifeguard 1 (Glutamate [NMDA] receptor-associated protein 1) (NMDA receptor glutamate-binding subunit)	endoplasmic reticulum calcium ion homeostasis [GO:0032469]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902042]; negative regulation of neuron apoptotic process [GO:0043524]	hit with GO BP
GN009650	Chromosome_4A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009651	Chromosome_4A	474	1	9	35.44303797468354	0.6371919342793129	0	3	0	0	3	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009652	Chromosome_4A	30464	22	868	36.35438550420168	0.8623657487797359	1.5035740695094897	842	0	0.768775872264932	114	0	1.6085866411246021	728	0	0.37778617302606726	40	0	unmethylated (<10%)	Q9JHA8	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009653	Chromosome_4A	7899	10	176	36.814786681858465	0.6575961402015041	0.5150415544890554	176	0	0.6565656565656566	39	0	0.4723449641932043	137	0	0.8631713554987213	65	0	unmethylated (<10%)	Q9JHA8	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009654	Chromosome_4A	20970	24	416	33.648068669527895	0.7023831454840817	0.7176373171404913	344	0	0.466786355475763	113	0	0.8290155440414507	231	0	0.555247084952804	36	0	unmethylated (<10%)	Q9JHA8	von Willebrand factor A domain-containing protein 7 (Protein G7c)	NA	hit, no GO BP
GN009655	Chromosome_4A	711	1	17	39.09985935302391	0.6329597821533305	3.816793893129771	14	0	3.816793893129771	14	0	NA	NA	NA	1.0438413361169103	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009656	Chromosome_4A	620	2	5	39.67741935483871	0.20759391950713185	0	5	0	0	5	0	NA	NA	NA	0.421417947446703	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009657	Chromosome_4A	2196	1	80	41.666666666666664	0.845021645021645	1.0487144790257104	80	0	1.0487144790257104	80	0	NA	NA	NA	1.7015070491006319	39	0	unmethylated (<10%)	O14132	Sporulation protein kinase pit1 (EC 2.7.11.1)	ascospore formation [GO:0030437]; intracellular signal transduction [GO:0035556]; regulation of meiotic nuclear division [GO:0040020]	hit with GO BP
GN009658	Chromosome_4A	381	1	17	45.40682414698163	0.8705645161290323	0.6861063464837049	17	0	0.6861063464837049	17	0	NA	NA	NA	0.5482918599746942	52	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN009659	Chromosome_4A	1977	3	89	43.90490642387456	0.9417560949500896	0.9445100354191264	89	0	0.9381663113006397	82	0	1.0204081632653061	7	0	0.4291845493562232	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009660	Chromosome_4A	22918	8	344	34.318003316170696	0.5116795695443712	57.42726534797283	329	0.7386018237082067	80.04750593824228	21	0.8571428571428571	56.137102601156066	308	0.7305194805194806	1.155366372757677	49	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009661	Chromosome_4A	7559	8	61	35.13692287339595	0.26271650941246183	71.45069695405266	60	0.7833333333333333	66.32934682612695	18	0.7777777777777778	73.44815213491209	42	0.7857142857142857	3.207096554077107	48	0	methylated (>=50%)	Q6SKR2	Methyltransferase HEMK2 (HemK methyltransferase family member 2) (M.HsaHemK2P) (Lysine N-methyltransferase 9) (EC 2.1.1.-) (Methylarsonite methyltransferase N6AMT1) (EC 2.1.1.-) (Methyltransferase N6AMT1) (Protein N(5)-glutamine methyltransferase) (EC 2.1.1.-)	arsonoacetate metabolic process [GO:0018872]; methylation [GO:0032259]; negative regulation of gene expression, epigenetic [GO:0045814]; positive regulation of cell growth [GO:0030307]; toxin metabolic process [GO:0009404]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN009662	Chromosome_4A	3875	8	110	34.55483870967742	0.9510517907663748	0.39539281416537736	109	0	0.6024096385542169	40	0	0.2875816993464052	69	0	0.7200338839474799	44	0	unmethylated (<10%)	P07584	Astacin (EC 3.4.24.21) (Crayfish small molecule proteinase)	cell adhesion [GO:0007155]; fertilization [GO:0009566]; negative regulation of binding of sperm to zona pellucida [GO:2000360]; positive regulation of protein processing [GO:0010954]; prevention of polyspermy [GO:0060468]; proteolysis [GO:0006508]	hit with GO BP
GN009663	Chromosome_4A	4447	4	126	38.34045423881268	0.7721826706025352	0.5758946935417524	125	0	0.5651397977394408	81	0	0.6	44	0	0.6060606060606061	48	0	unmethylated (<10%)	Q6PFY8	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99) (Tripartite motif-containing protein 45)	bone development [GO:0060348]; inflammatory response [GO:0006954]; negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN009664	Chromosome_4A	2898	4	39	34.09247757073844	0.4698384984722829	74.0587931923672	39	0.6410256410256411	65.64516129032258	14	0.5714285714285714	78.01364670204701	25	0.68	0.5272407732864675	46	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009665	Chromosome_4A	3459	4	105	33.42006360219717	1.0879704518494555	2.7682737169517884	105	0	1.130952380952381	28	0	3.3473684210526318	77	0	0.6226650062266501	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009666	Chromosome_4A	5430	4	101	36.70349907918969	0.5546128237592683	0.6620950579333176	99	0	0.48439181916038754	49	0	0.8013496415014761	50	0	0.6187529747739172	34	0	unmethylated (<10%)	Q5F226	Protocadherin Fat 2 (FAT tumor suppressor homolog 2)	cell-cell adhesion mediated by cadherin [GO:0044331]; cell-substrate adhesion [GO:0031589]; epithelial cell migration [GO:0010631]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN009667	Chromosome_4A	2013	2	47	34.87332339791356	0.767996298460939	0.7922218221101909	47	0	0.7072135785007072	25	0	0.880410858400587	22	0	0.5733558178752108	46	0	unmethylated (<10%)	Q5RFZ7	Protein FAM167A	NA	hit, no GO BP
GN009668	Chromosome_4A	10038	2	282	40.11755329746961	0.7007309027339416	0.6177156177156177	237	0	0.4825090470446321	19	0	0.632176493355696	218	0	0.45146726862302483	48	0	unmethylated (<10%)	Q6P1G6	Protein FAM167A	NA	hit, no GO BP
GN009669	Chromosome_4A	916	2	22	46.61572052401747	0.4422984065668759	45.45454545454545	1	0	45.45454545454545	1	0	NA	NA	NA	7.287449392712551	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009670	Chromosome_4A	714	1	17	46.49859943977591	0.44074074074074077	9.18918918918919	8	0	9.18918918918919	8	0	NA	NA	NA	3.7745604963805586	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009671	Chromosome_4A	20161	16	545	35.76707504588066	0.8458665051877116	2.492058690062018	533	0	2.1715988929103682	119	0	2.561272819239435	414	0	0.6746626686656672	52	0	unmethylated (<10%)	Q14517	Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]	anatomical structure morphogenesis [GO:0009653]; cell adhesion [GO:0007155]; cell migration [GO:0016477]; cell-cell adhesion mediated by cadherin [GO:0044331]; cell-cell signaling [GO:0007267]; cellular response to angiotensin [GO:1904385]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]	hit with GO BP
GN009672	Chromosome_4A	8030	2	165	36.612702366127024	0.6151559722988295	2.142759656066603	144	0	5.247813411078718	13	0	1.9902634593356243	131	0	2.3608174770965467	63	0	unmethylated (<10%)	Q6AY39	UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 (Beta-1,3-GalNAc-T1) (EC 2.4.1.79) (Beta-1,3-galactosyltransferase 3) (Beta-1,3-GalTase 3) (Beta3Gal-T3) (Beta3GalT3) (b3Gal-T3) (Beta-3-Gx-T3) (Galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase) (Globoside synthase) (UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-acetylgalactosaminyltransferase)	glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN009673	Chromosome_4A	4169	4	65	34.51667066442792	0.5237032312925171	1.0495156081808397	65	0	0.3257328990228013	5	0	1.114696391903784	60	0	0.632295719844358	37	0	unmethylated (<10%)	P47787	Thromboxane-A synthase (TXA synthase) (TXS) (EC 5.3.99.5) (Cytochrome P450 5A1) (Hydroperoxy icosatetraenoate dehydratase) (EC 4.2.1.152)	icosanoid metabolic process [GO:0006690]; prostaglandin biosynthetic process [GO:0001516]	hit with GO BP
GN009674	Chromosome_4A	1328	2	39	43.825301204819276	0.6117936117936118	0	14	0	0	14	0	NA	NA	NA	0	2	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009675	Chromosome_4A	8936	5	145	34.05326768128917	0.5598271764960034	76.46406955928735	145	0.8344827586206897	96.34387351778656	23	1	74.58718164007837	122	0.8032786885245902	96.7551622418879	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009676	Chromosome_4A	24549	14	579	36.04627479734409	0.7263697718685584	0.7282369197445568	565	0	0.44052863436123346	41	0	0.7520012937656667	524	0	0.21873860736419978	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009677	Chromosome_4A	6981	9	199	37.530439765076636	0.811056536733201	1.2667904335481053	199	0	0.468384074941452	39	0	1.4498590414820782	160	0	0.46982291290206	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009678	Chromosome_4A	357	1	8	47.89915966386555	0.403960396039604	0	8	0	0	8	0	NA	NA	NA	0.9221902017291066	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009679	Chromosome_4A	1294	2	49	37.24884080370943	1.097141472868217	0.49504950495049505	49	0	0.4665629860031104	43	0	0.6060606060606061	6	0	1.6078294302691367	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016562	Chromosome_4A	390	1	13	43.333333333333336	0.7102829924348557	0.7142857142857143	13	0	0.7142857142857143	13	0	NA	NA	NA	0.42656916514320536	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016563	Chromosome_4A	1935	1	73	39.84496124031008	0.9506999596177144	0.528806011689396	73	0	0.528806011689396	73	0	NA	NA	NA	0.46985121378230227	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009681	Chromosome_4A	12068	12	174	34.33046072257209	0.4918042462496926	84.6264367816092	12	1	91.35446685878962	5	1	77.93696275071633	7	1	NA	NA	NA	methylated (>=50%)	Q9Y6N9	Harmonin (Antigen NY-CO-38/NY-CO-37) (Autoimmune enteropathy-related antigen AIE-75) (Protein PDZ-73) (Renal carcinoma antigen NY-REN-3) (Usher syndrome type-1C protein)	actin filament bundle assembly [GO:0051017]; auditory receptor cell morphogenesis [GO:0002093]; brush border assembly [GO:1904970]; equilibrioception [GO:0050957]; G2/M transition of mitotic cell cycle [GO:0000086]; inner ear auditory receptor cell differentiation [GO:0042491]; inner ear morphogenesis [GO:0042472]; inner ear receptor cell stereocilium organization [GO:0060122]; parallel actin filament bundle assembly [GO:0030046]; photoreceptor cell maintenance [GO:0045494]; protein localization to microvillus [GO:1904106]; protein-containing complex assembly [GO:0065003]; regulation of microvillus length [GO:0032532]; retinal cone cell development [GO:0046549]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN009682	Chromosome_4A	9642	8	100	34.0904376685335	0.35825354185012204	84.17277653809371	100	0.99	91.02416570771001	14	1	83.07123034227567	86	0.9883720930232558	84.9825378346915	8	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009683	Chromosome_4A	504	1	7	38.29365079365079	0.3933110367892977	0.228310502283105	7	0	0.228310502283105	7	0	NA	NA	NA	1.4184397163120568	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009684	Chromosome_4A	3141	1	95	39.98726520216491	0.7771107870201573	0.7841518778373917	95	0	0.7841518778373917	95	0	NA	NA	NA	1.2410601598653765	53	0	unmethylated (<10%)	Q01262	Putative D-/L-hydantoinase subunit A (EC 3.5.2.-) (Hydantoin utilization protein A)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN009685	Chromosome_4A	1059	3	10	32.861189801699716	0.3571549020269131	26.187245590230663	10	0.3	0.6557377049180327	4	0	44.21296296296296	6	0.5	0.7844129554655871	68	0	sparse (10-50%)	Q3ZBR6	26S proteasome complex subunit SEM1 (26S proteasome complex subunit DSS1) (Split hand/foot malformation type 1 protein homolog)	double-strand break repair via homologous recombination [GO:0000724]; mRNA export from nucleus [GO:0006406]; proteasome assembly [GO:0043248]	hit with GO BP
GN009686	Chromosome_4A	1941	1	47	38.53683668212262	0.6540695173363159	1.0351966873706004	32	0	1.0351966873706004	32	0	NA	NA	NA	0.351150994927819	44	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN009687	Chromosome_4A	594	1	16	41.07744107744108	0.6511819116135663	NA	0	NA	NA	NA	NA	NA	NA	NA	1.951219512195122	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009688	Chromosome_4A	804	1	18	38.43283582089552	0.6062840385421031	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009689	Chromosome_4A	594	1	16	41.07744107744108	0.6511819116135663	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009690	Chromosome_4A	804	1	18	38.43283582089552	0.6062840385421031	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009691	Chromosome_4A	594	1	16	41.07744107744108	0.6511819116135663	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009692	Chromosome_4A	804	1	18	38.55721393034826	0.6023976023976024	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009693	Chromosome_4A	1941	1	44	38.794435857805254	0.6036471586089907	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN009694	Chromosome_4A	1941	1	44	38.639876352395675	0.6084249371299931	0.26666666666666666	24	0	0.26666666666666666	24	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN009695	Chromosome_4A	2827	3	106	45.17155995755218	0.7665715045841519	0.7204610951008645	106	0	0.860479409956976	71	0	0.5221932114882507	35	0	0.4807692307692308	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009696	Chromosome_4A	10496	8	307	36.1375762195122	0.8995859797037926	0.5401051783768418	299	0	0.3583312004095214	49	0	0.5813953488372093	250	0	0.6610356224752112	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009697	Chromosome_4A	10572	15	248	36.16155883465758	0.7189351935637781	1.8105399288716457	248	0	1.6058016058016058	86	0	1.9034191046880509	162	0	0.4118050789293068	37	0	unmethylated (<10%)	Q8BFR4	N-acetylglucosamine-6-sulfatase (EC 3.1.6.14) (Glucosamine-6-sulfatase) (G6S)	glycosaminoglycan metabolic process [GO:0030203]; heparan sulfate proteoglycan catabolic process [GO:0030200]; keratan sulfate proteoglycan catabolic process [GO:0042340]	hit with GO BP
GN009698	Chromosome_4A	22847	27	246	35.41383989145183	0.3435288828060077	87.45169818995322	233	0.9613733905579399	89.17654398003744	61	0.9508196721311475	86.97271546123864	172	0.9651162790697675	0.44411547002220575	33	0	methylated (>=50%)	Q9UPZ3	BLOC-2 complex member HPS5 (Alpha-integrin-binding protein 63) (Hermansky-Pudlak syndrome 5 protein) (Ruby-eye protein 2 homolog) (Ru2)	developmental pigmentation [GO:0048066]; melanosome assembly [GO:1903232]; platelet dense granule organization [GO:0060155]	hit with GO BP
GN009699	Chromosome_4A	17217	11	193	34.04774350932218	0.3886985163654603	73.67070689197558	176	0.8125	58.44806007509387	15	0.6	74.82863670982483	161	0.8322981366459627	6.41319285387082	43	0.023255813953488372	methylated (>=50%)	Q2HZX7	Protein fuzzy homolog (Xfy)	cilium assembly [GO:0060271]; embryonic body morphogenesis [GO:0010172]; embryonic skeletal system morphogenesis [GO:0048704]; establishment of planar polarity [GO:0001736]; neural tube closure [GO:0001843]; non-motile cilium assembly [GO:1905515]; regulation of smoothened signaling pathway [GO:0008589]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN009700	Chromosome_4A	3362	2	38	39.53004164187983	0.28933005403593637	78.89196675900277	38	0.9736842105263158	92.07317073170732	28	1	63.09378806333739	10	0.9	67.24550898203593	31	0.9354838709677419	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009701	Chromosome_4A	615	1	13	39.83739837398374	0.5403487429034874	NA	0	NA	NA	NA	NA	NA	NA	NA	36.47540983606557	16	0.3125	NA	NA	NA	NA	no Swiss-Prot hit
GN009702	Chromosome_4A	588	1	18	41.156462585034014	0.7374581939799331	36	11	0.36363636363636365	36	11	0.36363636363636365	NA	NA	NA	47.53363228699551	13	0.5384615384615384	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009703	Chromosome_4A	294	1	2	42.51700680272109	0.1540880503144654	67.74193548387096	2	0.5	67.74193548387096	2	0.5	NA	NA	NA	66.76283900750144	33	0.7575757575757576	NA	NA	NA	NA	no Swiss-Prot hit
GN009704	Chromosome_4A	1417	4	39	36.97953422724065	0.8073720196353437	12.559241706161137	10	0	12.371134020618557	7	0	12.719298245614034	3	0	1.2770897832817338	61	0	sparse (10-50%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN009705	Chromosome_4A	966	1	36	44.927536231884055	0.7501294219154443	0.3103180760279286	36	0	0.3103180760279286	36	0	NA	NA	NA	1.6548463356973995	33	0	unmethylated (<10%)	Q6B9X6	Alpha-protein kinase vwkA (EC 2.7.11.1) (von Willebrand factor A alpha-kinase) (vWF kinase)	contractile vacuole discharge [GO:0070177]; contractile vacuole organization [GO:0033298]; hypotonic response [GO:0006971]; mitotic cytokinesis [GO:0000281]; myosin II filament organization [GO:0031038]; regulation of sorocarp development [GO:0031156]; sorocarp morphogenesis [GO:0031288]	hit with GO BP
GN009706	Chromosome_4A	966	1	39	45.65217391304348	0.7880271084337349	0.7412898443291327	38	0	0.7412898443291327	38	0	NA	NA	NA	5.366098294884654	56	0	unmethylated (<10%)	Q5UQ35	Putative ariadne-like RING finger protein R811	NA	hit, no GO BP
GN009707	Chromosome_4A	4221	3	74	37.38450604122246	0.5023892739212883	58.6522462562396	74	0.5945945945945946	82.60381593714926	14	0.9285714285714286	50.79189686924494	60	0.5166666666666667	39.4910941475827	64	0.609375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009708	Chromosome_4A	573	3	15	38.917975567190226	0.6920289855072463	1.0507880910683012	15	0	0.6012024048096193	13	0	4.166666666666667	2	0	0.5555555555555556	6	0	unmethylated (<10%)	A7Y2W8	Sodium- and chloride-dependent glycine transporter 1 (GlyT-1) (GlyT1) (xGlyT1) (Solute carrier family 6 member 9)	glycine import across plasma membrane [GO:1903804]; neurotransmitter transport [GO:0006836]; regulation of synaptic transmission, glycinergic [GO:0060092]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN009709	Chromosome_4A	585	1	22	47.863247863247864	0.6587837837837838	0.5797101449275363	22	0	0.5797101449275363	22	0	NA	NA	NA	0.5774783445620789	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009710	Chromosome_4A	4813	5	66	33.28485352171203	0.4978957713232424	78.09885931558935	66	0.8636363636363636	72.45934959349593	18	0.8888888888888888	79.39663236669784	48	0.8541666666666666	0.6539235412474849	32	0	methylated (>=50%)	Q4KMZ8	Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 (Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 1) (Protein FAM77C)	regulation of sodium ion transport [GO:0002028]	hit with GO BP
GN009711	Chromosome_4A	13370	5	128	33.02169035153328	0.3562643537462549	70.35340314136126	127	0.6929133858267716	69.88847583643123	6	0.8333333333333334	70.36539752565454	121	0.6859504132231405	45.16460905349794	19	0.3684210526315789	methylated (>=50%)	Q15208	Serine/threonine-protein kinase 38 (EC 2.7.11.1) (NDR1 protein kinase) (Nuclear Dbf2-related kinase 1)	DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; intracellular signal transduction [GO:0035556]; negative regulation of MAP kinase activity [GO:0043407]; postsynapse organization [GO:0099173]; protein modification process [GO:0036211]; protein phosphorylation [GO:0006468]	hit with GO BP
GN009712	Chromosome_4A	11947	4	197	33.69883652799866	0.5809042182437115	72.06963576438773	189	0.7195767195767195	37.380497131931165	20	0.35	75.43339204598128	169	0.7633136094674556	22.286821705426355	34	0.2647058823529412	methylated (>=50%)	Q99JX1	Transcription initiation factor TFIID subunit 11 (TFIID subunit p30-beta) (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28)	host-mediated activation of viral transcription [GO:0043923]; mRNA transcription by RNA polymerase II [GO:0042789]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN009713	Chromosome_4A	4941	8	62	36.20724549686298	0.3842917356615987	72.64429530201342	62	0.8387096774193549	76.53365098272782	29	0.7931034482758621	69.45259042033236	33	0.8787878787878788	42.62536873156342	17	0.4117647058823529	methylated (>=50%)	Q92753	Nuclear receptor ROR-beta (Nuclear receptor RZR-beta) (Nuclear receptor subfamily 1 group F member 2) (Retinoid-related orphan receptor-beta)	amacrine cell differentiation [GO:0035881]; cellular response to retinoic acid [GO:0071300]; eye photoreceptor cell development [GO:0042462]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; retinal cone cell development [GO:0046549]; retinal rod cell development [GO:0046548]	hit with GO BP
GN009714	Chromosome_4A	21326	8	239	34.877614179874335	0.36985657928775467	82.34794908062234	199	0.9597989949748744	90.44988161010261	24	1	81.24866138359391	175	0.9542857142857143	54.891661195009846	22	0.7727272727272727	methylated (>=50%)	Q92753	Nuclear receptor ROR-beta (Nuclear receptor RZR-beta) (Nuclear receptor subfamily 1 group F member 2) (Retinoid-related orphan receptor-beta)	amacrine cell differentiation [GO:0035881]; cellular response to retinoic acid [GO:0071300]; eye photoreceptor cell development [GO:0042462]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; retinal cone cell development [GO:0046549]; retinal rod cell development [GO:0046548]	hit with GO BP
GN009715	Chromosome_4A	6589	4	81	35.04325390802853	0.4019195722569471	71.92134644225962	81	0.9135802469135802	78.81811204911742	19	0.9473684210526315	70.00851426138783	62	0.9032258064516129	82.24719101123596	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009716	Chromosome_4A	1203	1	51	48.12967581047381	0.7328356426182513	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4275165176836378	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009717	Chromosome_4A	642	1	31	51.71339563862929	0.7519552650470397	0.5336179295624333	21	0	0.5336179295624333	21	0	NA	NA	NA	0.5152868430092752	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009718	Chromosome_4A	1239	1	54	48.264729620661825	0.7492189337185474	NA	0	NA	NA	NA	NA	NA	NA	NA	0.43772383605252685	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009719	Chromosome_4A	3052	3	102	38.17169069462648	0.9174727237360967	0.6031363088057901	102	0	0.684931506849315	24	0	0.5812174977057204	78	0	0.64	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009720	Chromosome_4A	2708	7	144	59.30576070901034	0.6071096621719453	4.237288135593221	10	0	0	1	0	4.62962962962963	9	0	7.042253521126761	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009721	Chromosome_4A	4807	6	154	37.07093821510298	0.9346566805381601	0.7484542792059876	151	0	0.8599068434252956	74	0	0.6557377049180327	77	0	0.5981703026038001	44	0	unmethylated (<10%)	F1QJF4	Nuclear receptor ROR-alpha B (Retinoid-related orphan receptor alpha 1) (Retinoid-related orphan receptor-alpha B)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN009722	Chromosome_4A	12308	8	158	34.140396490087745	0.4418027120241309	91.72583287820864	158	0.9873417721518988	94.36846339501207	24	1	91.38868931540593	134	0.9850746268656716	83.01165331391114	57	1	methylated (>=50%)	Q8C0E2	Vacuolar protein sorting-associated protein 26B (Vesicle protein sorting 26B)	cellular response to type II interferon [GO:0071346]; intracellular protein transport [GO:0006886]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN009723	Chromosome_4A	930	1	41	41.82795698924731	1.007930214115781	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009724	Chromosome_4A	930	1	41	41.82795698924731	1.007930214115781	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009725	Chromosome_4A	930	1	41	41.82795698924731	1.007930214115781	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009726	Chromosome_4A	930	1	41	41.82795698924731	1.007930214115781	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009727	Chromosome_4A	20992	4	449	36.099466463414636	0.6578801875097238	2.6089840439252683	420	0	0.6086956521739131	23	0	2.6975025974525724	397	0	2.675189393939394	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009728	Chromosome_4A	588	1	22	41.156462585034014	0.9414161996943454	0.3683241252302026	21	0	0.3683241252302026	21	0	NA	NA	NA	1.2681159420289856	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009729	Chromosome_4A	234	1	4	49.14529914529915	0.29714285714285715	0	4	0	0	4	0	NA	NA	NA	1.5523932729624839	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009730	Chromosome_4A	348	1	8	44.54022988505747	0.4758974358974359	0.5434782608695652	8	0	0.5434782608695652	8	0	NA	NA	NA	0.4893964110929853	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020219	Chromosome_4A	189	1	7	46.560846560846564	0.6837209302325581	0	5	0	0	5	0	NA	NA	NA	1.7391304347826086	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009731	Chromosome_4A	588	1	22	41.326530612244895	0.9311834149150591	0.3424657534246575	13	0	0.3424657534246575	13	0	NA	NA	NA	1.0819165378670788	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009732	Chromosome_4A	1174	2	25	40.630323679727425	0.5276689079860487	0.8254716981132075	25	0	0.5625879043600562	22	0	2.18978102189781	3	0	1.1627906976744187	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009733	Chromosome_4A	14633	14	129	36.46552313264539	0.26790997781251213	89.12724066999706	129	0.9844961240310077	92.55952380952381	28	1	88.28268033687294	101	0.9801980198019802	19.37984496124031	39	0.2564102564102564	methylated (>=50%)	Q96QG7	Myotubularin-related protein 9 (Inactive phosphatidylinositol 3-phosphatase 9)	negative regulation of autophagy [GO:0010507]; phosphatidylinositol biosynthetic process [GO:0006661]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of phosphatase activity [GO:0010922]; protein stabilization [GO:0050821]; regulation of phosphatidylinositol dephosphorylation [GO:0060304]	hit with GO BP
GN009734	Chromosome_4A	420	1	20	56.904761904761905	0.6383948928408573	0.6557377049180327	15	0	0.6557377049180327	15	0	NA	NA	NA	1.094890510948905	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009735	Chromosome_4A	420	1	13	46.666666666666664	0.5685723211496407	1.8691588785046729	13	0	1.8691588785046729	13	0	NA	NA	NA	0.587467362924282	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009736	Chromosome_4A	1161	1	58	42.204995693367785	1.1223	0.45317220543806647	58	0	0.45317220543806647	58	0	NA	NA	NA	0.6791720569210866	64	0	unmethylated (<10%)	O88319	Neurotensin receptor type 1 (NT-R-1) (NTR1)	adult locomotory behavior [GO:0008344]; associative learning [GO:0008306]; cAMP biosynthetic process [GO:0006171]; conditioned place preference [GO:1990708]; D-aspartate import across plasma membrane [GO:0070779]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; inositol phosphate catabolic process [GO:0071545]; L-glutamate import across plasma membrane [GO:0098712]; learning [GO:0007612]; negative regulation of apoptotic process [GO:0043066]; negative regulation of release of sequestered calcium ion into cytosol [GO:0051280]; negative regulation of systemic arterial blood pressure [GO:0003085]; neuropeptide signaling pathway [GO:0007218]; positive regulation of apoptotic process [GO:0043065]; positive regulation of arachidonate secretion [GO:0090238]; positive regulation of cation channel activity [GO:2001259]; positive regulation of gamma-aminobutyric acid secretion [GO:0014054]; positive regulation of gene expression [GO:0010628]; positive regulation of glutamate secretion [GO:0014049]; positive regulation of inhibitory postsynaptic potential [GO:0097151]; positive regulation of inositol phosphate biosynthetic process [GO:0060732]; positive regulation of locomotion [GO:0040017]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]; regulation of behavioral fear response [GO:2000822]; regulation of inositol trisphosphate biosynthetic process [GO:0032960]; regulation of membrane depolarization [GO:0003254]; regulation of respiratory gaseous exchange [GO:0043576]; response to food [GO:0032094]; response to lipid [GO:0033993]; response to stress [GO:0006950]; temperature homeostasis [GO:0001659]; vocalization behavior [GO:0071625]	hit with GO BP
GN009737	Chromosome_4A	4054	3	155	38.110508140108536	1.053170556745541	1.1610297829379101	155	0	0.9608785175017158	25	0	1.2061233957012525	130	0	2.048997772828508	41	0	unmethylated (<10%)	P05419	Neo-calmodulin (NeoCaM)	calcineurin-mediated signaling [GO:0097720]; detection of calcium ion [GO:0005513]; regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum [GO:0010880]	hit with GO BP
GN009738	Chromosome_4A	929	2	13	38.85898815931109	0.3808577735730054	1.2820512820512822	6	0	4.761904761904762	2	0	0	4	0	1.8411967779056386	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009739	Chromosome_4A	12682	25	379	37.03674499290333	0.8719614096577447	0.5114494943624317	375	0	0.47156726768377255	189	0	0.5402160864345739	186	0	0.5524861878453039	40	0	unmethylated (<10%)	B3EWY9	Mucin-like protein	cell-matrix adhesion [GO:0007160]	hit with GO BP
GN009740	Chromosome_4A	783	2	18	37.42017879948914	0.6844405594405595	1.8987341772151898	18	0	1.0741138560687433	12	0	3.0816640986132513	6	0	0.8614501076812635	45	0	unmethylated (<10%)	Q6P949	Lysine-specific demethylase phf2 (EC 1.14.11.-) (PHD finger protein 2)	brain development [GO:0007420]; chromatin remodeling [GO:0006338]; negative regulation of rDNA heterochromatin formation [GO:0061188]; protein demethylation [GO:0006482]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN009741	Chromosome_4A	9166	4	316	36.78813004582151	1.0193620136268935	1.0690061928634622	278	0	1.007838745800672	23	0	1.0733170231236682	255	0	1.6627868307283007	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009742	Chromosome_4A	945	1	40	43.06878306878307	0.9168081494057725	0.6300630063006301	40	0	0.6300630063006301	40	0	NA	NA	NA	0.9668063164679342	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009743	Chromosome_4A	20619	17	597	37.32964741258063	0.8379824364341877	1.1893044619422573	587	0	0.9833134684147795	202	0	1.2675418741511997	385	0	0.554016620498615	37	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN009744	Chromosome_4A	35244	18	1026	38.403699920553855	0.7907150296266032	1.3913602214313958	930	0	0.6272113219684786	201	0	1.5301057057758571	729	0	0.604982206405694	34	0	unmethylated (<10%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN009745	Chromosome_4A	12609	6	179	35.46673011341105	0.45396190962360367	72.23429576736004	178	0.6629213483146067	84.34718100890208	29	0.7931034482758621	70.2705953096813	149	0.6375838926174496	0.8201892744479495	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009746	Chromosome_4A	20262	16	301	37.439541999802586	0.42466546828312896	85.6898950297205	298	0.9328859060402684	85.63664596273291	57	0.9298245614035088	85.70025683638012	241	0.9336099585062241	24.117276166456495	62	0.25806451612903225	methylated (>=50%)	Q6NV04	2-hydroxyacyl-CoA lyase 2 (EC 4.1.2.-) (Acetolactate synthase-like protein) (IlvB-like protein)	embryonic cranial skeleton morphogenesis [GO:0048701]; fatty acid alpha-oxidation [GO:0001561]	hit with GO BP
GN009747	Chromosome_4A	4844	3	71	38.85218827415359	0.3926624400458055	90.37089871611983	71	0.971830985915493	91.57355679702049	60	0.9833333333333333	86.4329268292683	11	0.9090909090909091	93.20785597381342	51	1	methylated (>=50%)	Q5TF39	Solute carrier family 60 member 2 (Major facilitator superfamily domain-containing protein 4B) (Sodium-dependent glucose transporter 1)	D-glucose import across plasma membrane [GO:0098708]	hit with GO BP
GN009748	Chromosome_4A	1047	1	57	44.50811843361986	1.1091720100362419	0.8987701040681173	57	0	0.8987701040681173	57	0	NA	NA	NA	0.429042904290429	57	0	unmethylated (<10%)	P12812	Major egg antigen (p40)	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN009749	Chromosome_4A	2163	3	55	36.33841886269071	0.7733838672768879	0.4433833560709413	55	0	0.4934210526315789	38	0	0.36101083032490977	17	0	0.5020080321285141	50	0	unmethylated (<10%)	P25067	Collagen alpha-2(VIII) chain (Endothelial collagen)	basement membrane assembly [GO:0070831]; cell-cell adhesion [GO:0098609]; extracellular matrix organization [GO:0030198]	hit with GO BP
GN009750	Chromosome_4A	162	1	4	46.91358024691358	0.453781512605042	1.8633540372670807	4	0	1.8633540372670807	4	0	NA	NA	NA	0.7246376811594203	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009751	Chromosome_4A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009752	Chromosome_4A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009753	Chromosome_4A	1593	2	81	43.75392341494037	1.071738263729692	0.6765899864682002	81	0	0.6753497346840328	77	0	0.6944444444444444	4	0	0.6056018168054504	52	0	unmethylated (<10%)	Q8K0H7	Solute carrier family 45 member 3 (Prostate cancer-associated protein 6) (Prostein)	positive regulation of fatty acid biosynthetic process [GO:0045723]; positive regulation of glucose metabolic process [GO:0010907]; regulation of oligodendrocyte differentiation [GO:0048713]; sucrose transport [GO:0015770]	hit with GO BP
GN009754	Chromosome_4A	16353	13	246	36.54375343973583	0.4506862402851526	93.53713009491904	241	0.995850622406639	95.29737206085754	70	1	93.09199020636586	171	0.9941520467836257	82.0659062103929	36	1	methylated (>=50%)	A6QQW0	Zinc finger protein 143 (Selenocysteine tRNA gene transcription-activating factor)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN009755	Chromosome_4A	18875	7	299	34.34701986754967	0.5374616828353959	77.65674027588656	282	0.8936170212765957	80.39591315453384	27	0.9629629629629629	77.3768352365416	255	0.8862745098039215	36.420395421436005	43	0.4186046511627907	methylated (>=50%)	Q6IMK3	DnaJ homolog subfamily C member 27 (Rab and DnaJ domain-containing protein)	NA	hit, no GO BP
GN009756	Chromosome_4A	621	1	25	43.96135265700483	0.8414634146341463	0.7125890736342043	25	0	0.7125890736342043	25	0	NA	NA	NA	0.5712109672505712	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009757	Chromosome_4A	2928	1	53	38.86612021857923	0.5008569021775966	0.5558987029030266	53	0	0.5558987029030266	53	0	NA	NA	NA	0.14684287812041116	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009758	Chromosome_4A	246	1	14	52.4390243902439	0.8424657534246576	0.5385996409335727	14	0	0.5385996409335727	14	0	NA	NA	NA	0.4654983570646221	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009759	Chromosome_4A	2055	1	36	40.24330900243309	0.47210629092162193	0.4175365344467641	36	0	0.4175365344467641	36	0	NA	NA	NA	0.43343653250773995	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009760	Chromosome_4A	524	2	3	40.0763358778626	0.1479529411764706	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q8K1R3	Polyribonucleotide nucleotidyltransferase 1, mitochondrial (EC 2.7.7.8) (3'-5' RNA exonuclease OLD35) (PNPase old-35) (Polynucleotide phosphorylase 1) (PNPase 1) (Polynucleotide phosphorylase-like protein)	cellular response to interferon-beta [GO:0035458]; cellular response to oxidative stress [GO:0034599]; liver regeneration [GO:0097421]; mitochondrial mRNA catabolic process [GO:0000958]; mitochondrial mRNA polyadenylation [GO:0097222]; mitochondrial RNA 3'-end processing [GO:0000965]; mitochondrial RNA 5'-end processing [GO:0000964]; mitochondrial RNA catabolic process [GO:0000957]; mitochondrion organization [GO:0007005]; mRNA catabolic process [GO:0006402]; nuclear polyadenylation-dependent mRNA catabolic process [GO:0071042]; positive regulation of miRNA catabolic process [GO:2000627]; positive regulation of mitochondrial RNA catabolic process [GO:0000962]; positive regulation of mRNA catabolic process [GO:0061014]; protein homooligomerization [GO:0051260]; protein homotrimerization [GO:0070207]; regulation of cellular respiration [GO:0043457]; regulation of cellular senescence [GO:2000772]; response to cAMP [GO:0051591]; response to growth hormone [GO:0060416]; RNA catabolic process [GO:0006401]; RNA import into mitochondrion [GO:0035927]; rRNA import into mitochondrion [GO:0035928]	hit with GO BP
GN017927	Chromosome_4A	3564	4	32	34.25925925925926	0.3060130403284231	52.67723601555489	30	0.6	40.056022408963585	13	0.46153846153846156	58.62676056338028	17	0.7058823529411765	0.4601226993865031	21	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017926	Chromosome_4A	888	4	7	36.03603603603604	0.24793586215148977	67.14285714285714	7	0.7142857142857143	64.28571428571429	6	0.6666666666666666	80.95238095238095	1	1	70.36158861885004	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020880	Chromosome_4A	1145	5	18	35.28384279475983	0.5078981739323295	31.03614457831325	18	0.4444444444444444	53.41922695738355	10	0.8	9.849906191369605	8	0	7.288343558282208	81	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009761	Chromosome_4A	1698	1	104	46.113074204947	1.1566757493188011	0.6415396952686447	100	0	0.6415396952686447	100	0	NA	NA	NA	0.6631927996210327	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009762	Chromosome_4A	16791	6	386	35.078315764397594	0.7497660930741339	89.04109589041096	385	0.974025974025974	76.76470588235294	25	0.72	89.4960578425317	360	0.9916666666666667	25.22704339051463	35	0.2857142857142857	methylated (>=50%)	Q5E9A1	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)	protein targeting to membrane [GO:0006612]	hit with GO BP
GN009763	Chromosome_4A	10474	5	159	35.65972885239641	0.48248458851226345	81.10297706198145	150	0.9066666666666666	68.5678073510773	18	0.7222222222222222	82.14890016920474	132	0.9318181818181818	44.7356529597831	34	0.5	methylated (>=50%)	Q9Y296	Trafficking protein particle complex subunit 4 (Hematopoietic stem/progenitor cell protein 172) (Synbindin) (TRS23 homolog)	autophagy [GO:0006914]; COPII vesicle coating [GO:0048208]; dendrite development [GO:0016358]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; vesicle coating [GO:0006901]; vesicle tethering [GO:0099022]	hit with GO BP
GN009764	Chromosome_4A	11053	16	96	36.125938659187554	0.2669625402863634	68.35833162112183	96	0.7916666666666666	71.35416666666667	17	0.8823529411764706	67.62221653442539	79	0.7721518987341772	57.519640852974184	54	0.5740740740740741	methylated (>=50%)	Q32NQ7	Dynein axonemal assembly factor 3	axonemal dynein complex assembly [GO:0070286]; motile cilium assembly [GO:0044458]	hit with GO BP
GN009765	Chromosome_4A	15221	13	191	34.603508310886276	0.42069376584903356	88.89325886887438	190	0.9842105263157894	90.79297498669506	32	1	88.56378069041905	158	0.9810126582278481	91.35367762128325	43	1	methylated (>=50%)	Q8CI33	Pre-mRNA splicing factor CWF19L1 (CWF19-like protein 1)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN009766	Chromosome_4A	9156	7	149	36.052861511577106	0.5015153052446766	82.03300061112243	148	0.8648648648648649	70.80745341614907	22	0.6818181818181818	83.48866643654355	126	0.8968253968253969	1.2465373961218837	26	0	methylated (>=50%)	Q8VDG5	Phosphopantothenate--cysteine ligase (EC 6.3.2.51) (Phosphopantothenoylcysteine synthetase) (PPC synthetase)	acetyl-CoA biosynthetic process [GO:0006085]; coenzyme A biosynthetic process [GO:0015937]; heart process [GO:0003015]	hit with GO BP
GN009767	Chromosome_4A	21865	10	362	34.14132174708438	0.5681514256956995	77.84604733676605	347	0.9106628242074928	69.18641896220372	34	0.8529411764705882	78.47331786542924	313	0.9169329073482428	0.46511627906976744	71	0	methylated (>=50%)	Q13895	Bystin	regulation of protein localization to nucleolus [GO:1904749]; ribosome biogenesis [GO:0042254]	hit with GO BP
GN009768	Chromosome_4A	8296	6	242	35.22179363548698	0.945437147044308	0.7578053955744165	242	0	0.6683375104427736	58	0	0.7776337715237919	184	0	57.114427860696516	48	0.6458333333333334	unmethylated (<10%)	Q6AYS8	Estradiol 17-beta-dehydrogenase 11 (EC 1.1.1.62) (17-beta-hydroxysteroid dehydrogenase 11) (17-beta-HSD 11) (17bHSD11) (17betaHSD11) (17-beta-hydroxysteroid dehydrogenase XI) (17-beta-HSD XI) (17betaHSDXI) (Dehydrogenase/reductase SDR family member 8)	androgen catabolic process [GO:0006710]	hit with GO BP
GN009769	Chromosome_4A	11137	6	312	37.48765376672353	0.797932158598806	0.5241251734237706	311	0	0.7150518412584912	81	0	0.471651763781075	230	0	0.9254066180594503	70	0	unmethylated (<10%)	Q02846	Retinal guanylyl cyclase 1 (RETGC-1) (EC 4.6.1.2) (CG-E) (Guanylate cyclase 2D, retinal) (Rod outer segment membrane guanylate cyclase) (ROS-GC)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of opsin-mediated signaling pathway [GO:0022400]; visual perception [GO:0007601]	hit with GO BP
GN009770	Chromosome_4A	11565	3	80	35.3307392996109	0.2805546685879749	2.07667731629393	49	0	0.5714285714285714	18	0	2.6607538802660753	31	0	0.622524052065648	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009771	Chromosome_4A	1044	1	13	41.0919540229885	0.29582806573957016	0.5076142131979695	13	0	0.5076142131979695	13	0	NA	NA	NA	0.6937874487543362	43	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN009772	Chromosome_4A	336	1	10	41.07142857142857	0.7111111111111111	0.9950248756218906	10	0	0.9950248756218906	10	0	NA	NA	NA	0.5535983895319577	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009773	Chromosome_4A	390	1	7	41.02564102564103	0.455	0.3125	7	0	0.3125	7	0	NA	NA	NA	0.3801076971808679	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009774	Chromosome_4A	384	1	10	43.229166666666664	0.5882352941176471	0.9689922480620154	10	0	0.9689922480620154	10	0	NA	NA	NA	0.25125628140703515	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009775	Chromosome_4A	1928	2	69	41.70124481327801	0.8275038410579548	23.28669670381788	69	0.028985507246376812	0.7945516458569807	25	0	29.22661870503597	44	0.045454545454545456	2.0819778789850356	51	0	sparse (10-50%)	Q3A8Q0	Pyridoxal 5'-phosphate synthase subunit PdxT (EC 4.3.3.6) (Pdx2) (Pyridoxal 5'-phosphate synthase glutaminase subunit) (EC 3.5.1.2)	L-glutamine catabolic process [GO:0006543]; pyridoxal 5'-phosphate biosynthetic process [GO:0042823]; pyridoxine metabolic process [GO:0008614]	hit with GO BP
GN009776	Chromosome_4A	9146	9	272	37.808878198119395	0.8323402979641437	0.6539991162174105	257	0	0.4424778761061947	59	0	0.7135575942915392	198	0	2.1944632005401754	49	0	unmethylated (<10%)	Q8WPW2	Pyridoxal 5'-phosphate synthase subunit SNZERR (PLP synthase subunit SNZERR) (EC 4.3.3.6) (Ethylene response protein) (PDX1)	amino acid metabolic process [GO:0006520]; pyridoxal 5'-phosphate biosynthetic process [GO:0042823]; pyridoxine biosynthetic process [GO:0008615]	hit with GO BP
GN009777	Chromosome_4A	459	1	22	42.0479302832244	1.1028833551769333	0.9668508287292817	22	0	0.9668508287292817	22	0	NA	NA	NA	1.4198782961460445	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015771	Chromosome_4A	738	1	6	40.10840108401084	0.20349264705882353	7.699711260827719	5	0	7.699711260827719	5	0	NA	NA	NA	0.975609756097561	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009778	Chromosome_4A	1044	1	37	40.03831417624521	0.8848268279274326	15.007215007215008	28	0	15.007215007215008	28	0	NA	NA	NA	0.704225352112676	16	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009779	Chromosome_4A	1275	1	43	40.470588235294116	0.8260758196721312	2.185792349726776	26	0	2.185792349726776	26	0	NA	NA	NA	12.995780590717299	44	0	unmethylated (<10%)	Q93075	3'-5' RNA nuclease TATDN2 (EC 3.1.13.-) (TatD DNase domain containing 2)	NA	hit, no GO BP
GN009780	Chromosome_4A	674	2	14	37.388724035608305	0.6081856268127619	0.3442340791738382	14	0	0.3795066413662239	13	0	0	1	0	0.7349762213575444	46	0	unmethylated (<10%)	A8Y1P7	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN001972	Chromosome_4A	916	3	21	46.069868995633186	0.4320754716981132	2.5179856115107913	13	0	2.5641025641025643	9	0	2.272727272727273	4	0	0.7118771075309105	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009781	Chromosome_4A	195	1	6	46.15384615384615	0.5966343702192759	1.6304347826086956	6	0	1.6304347826086956	6	0	NA	NA	NA	1.056499770326137	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009782	Chromosome_4A	324	1	9	42.592592592592595	0.6136363636363636	0.6993006993006993	9	0	0.6993006993006993	9	0	NA	NA	NA	0.421455938697318	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020457	Chromosome_4A	264	1	7	51.13636363636363	0.40561896400351183	0	6	0	0	6	0	NA	NA	NA	2.8139656070870247	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009783	Chromosome_4A	673	2	19	40.41604754829123	0.709915611814346	0.9929078014184397	19	0	1.0542168674698795	18	0	0	1	0	0.35714285714285715	36	0	unmethylated (<10%)	A0A1S6M251	Beta-1,4-galactosyltransferase 5 (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5) (EC 2.4.1.-) (Beta-1,4-GalT II) (Glucosylceramide beta-1,4-galactosyltransferase) (EC 2.4.1.274) (Lactosylceramide synthase) (LacCer synthase) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 5)	carbohydrate metabolic process [GO:0005975]; central nervous system myelination [GO:0022010]; central nervous system neuron axonogenesis [GO:0021955]; ganglioside biosynthetic process [GO:0001574]; glycoprotein biosynthetic process [GO:0009101]; neuron maturation [GO:0042551]; positive regulation of embryonic development [GO:0040019]; regulation of protein stability [GO:0031647]	hit with GO BP
GN009784	Chromosome_4A	1328	2	39	43.975903614457835	0.6076091929750467	NA	0	NA	NA	NA	NA	NA	NA	NA	0.32362459546925565	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009785	Chromosome_4A	348	1	19	52.01149425287356	0.8075232046897899	0.554016620498615	19	0	0.554016620498615	19	0	NA	NA	NA	2.421984163949697	56	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN009786	Chromosome_4A	766	2	24	37.0757180156658	0.9301760777170613	0.4767143381004767	22	0	0.7073386383731212	12	0	0.3132832080200501	10	0	0.9253903990746096	33	0	unmethylated (<10%)	P71359	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN009787	Chromosome_4A	2966	6	27	34.15374241402562	0.31447869624975455	0.5780346820809249	27	0	1.1345218800648298	16	0	0	11	0	5.386565272496831	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009788	Chromosome_4A	336	1	21	44.642857142857146	1.2564102564102564	0.5208333333333334	21	0	0.5208333333333334	21	0	NA	NA	NA	0.4961832061068702	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009789	Chromosome_4A	1161	2	0	32.55813953488372	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009790	Chromosome_4A	896	3	13	37.83482142857143	0.41337213428916175	94.77234401349072	13	1	94.8076923076923	12	1	94.52054794520548	1	1	1.035569563259793	36	0	methylated (>=50%)	Q4G163	F-box only protein 43 (Endogenous meiotic inhibitor 2)	cellular response to nerve growth factor stimulus [GO:1990090]; negative regulation of cell cycle process [GO:0010948]; negative regulation of meiotic nuclear division [GO:0045835]; protein ubiquitination [GO:0016567]; regulation of mitotic nuclear division [GO:0007088]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN009791	Chromosome_4A	7677	5	121	36.56376188615344	0.4779840136337955	90.44117647058823	118	1	95.33169533169533	17	1	89.76068376068376	101	1	49.419303163796556	47	0.425531914893617	methylated (>=50%)	Q9BSV6	tRNA-splicing endonuclease subunit Sen34 (EC 4.6.1.16) (Leukocyte receptor cluster member 5) (tRNA-intron endonuclease Sen34) (HsSen34)	tRNA-type intron splice site recognition and cleavage [GO:0000379]	hit with GO BP
GN009792	Chromosome_4A	22615	20	433	37.78465620163608	0.5364538793398617	90.92682165704478	421	0.9691211401425178	93.81868131868131	90	0.9666666666666667	90.3328944893737	331	0.9697885196374623	63.510282161645144	38	0.5789473684210527	methylated (>=50%)	Q7ZXZ0	Zygotic DNA replication licensing factor mcm3 (EC 3.6.4.12) (Zygotic minichromosome maintenance protein 3) (zMCM3)	DNA strand elongation involved in DNA replication [GO:0006271]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication initiation [GO:1902975]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN009793	Chromosome_4A	924	2	10	35.28138528138528	0.3507440024293957	55.81395348837209	5	0.6	55.81395348837209	5	0.6	NA	NA	NA	3.185378590078329	43	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009794	Chromosome_4A	7928	5	105	34.93945509586276	0.43904507537879267	79.20274708868318	100	0.82	58.92597968069666	11	0.6363636363636364	81.52770843734399	89	0.8426966292134831	0.9155645981688708	20	0	methylated (>=50%)	P37209	ATPase inhibitor mai-1, mitochondrial (ATP synthase F1 subunit epsilon)	NA	hit, no GO BP
GN009795	Chromosome_4A	5320	8	80	34.32330827067669	0.5130183220829315	88.87478849407783	80	0.875	87.2	15	0.7333333333333333	89.19054801407742	65	0.9076923076923077	4.077513120710537	71	0	methylated (>=50%)	Q6DED0	Translocating chain-associated membrane protein 1-like 1	protein insertion into ER membrane [GO:0045048]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	hit with GO BP
GN009796	Chromosome_4A	25706	9	446	35.415856220337666	0.554024469541807	58.05470161315881	445	0.6	75.68058076225046	27	0.7407407407407407	57.41683360152376	418	0.5909090909090909	3.363914373088685	57	0	methylated (>=50%)	Q568B7	tRNA-queuosine alpha-mannosyltransferase (QTMAN) (EC 2.4.1.110) (Glycosyltransferase-like domain-containing protein 1)	central nervous system development [GO:0007417]; regulation of translation [GO:0006417]; tRNA modification [GO:0006400]	hit with GO BP
GN009797	Chromosome_4A	8922	14	125	36.10177090338489	0.43216693792141364	87.72652388797364	125	0.96	94.93487698986975	50	1	84.25183118242064	75	0.9333333333333333	56.596173212487415	16	0.6875	methylated (>=50%)	Q61609	Sodium-dependent phosphate transporter 1 (Gibbon ape leukemia virus receptor 1) (GLVR-1) (Leukemia virus receptor 1 homolog) (Phosphate transporter 1) (PiT-1) (Solute carrier family 20 member 1)	biomineral tissue development [GO:0031214]; cell population proliferation [GO:0008283]; phosphate ion transmembrane transport [GO:0035435]; phosphate ion transport [GO:0006817]; sodium ion transport [GO:0006814]	hit with GO BP
GN009798	Chromosome_4A	774	1	43	46.51162790697674	1.0344055944055943	0.9994121105232217	43	0	0.9994121105232217	43	0	NA	NA	NA	0.5003335557038026	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009799	Chromosome_4A	12464	5	343	37.48395378690629	0.7836816697417058	3.4847583151491106	262	0	0.6617647058823529	23	0	3.7637143064738794	239	0	3.483511379470506	66	0	unmethylated (<10%)	Q7Z4M0	Meiotic recombination protein REC114	meiotic DNA double-strand break formation [GO:0042138]; oogenesis [GO:0048477]; spermatogenesis [GO:0007283]	hit with GO BP
GN009800	Chromosome_4A	11007	4	249	36.095212137730535	0.6972250841403943	59.9970001499925	249	0.5542168674698795	59.44540727902946	28	0.5	60.04926108374384	221	0.5610859728506787	1.1470281543274243	68	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009801	Chromosome_4A	603	1	28	44.94195688225539	0.9288150511607438	21.0801393728223	28	0.25	21.0801393728223	28	0.25	NA	NA	NA	76.57058388765707	21	0.9523809523809523	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009802	Chromosome_4A	882	1	37	44.44444444444444	0.8526860367892977	0.6456241032998565	37	0	0.6456241032998565	37	0	NA	NA	NA	0.8775137111517367	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009803	Chromosome_4A	4641	8	120	37.59965524671407	0.7352331565175835	1.11003861003861	120	0	0.9238728750923872	86	0	1.4603616133518775	34	0	1.1904761904761905	17	0	unmethylated (<10%)	Q96NG3	Outer dynein arm-docking complex subunit 4 (Tetratricopeptide repeat protein 25) (TPR repeat protein 25)	cilium movement [GO:0003341]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; flagellated sperm motility [GO:0030317]; mucociliary clearance [GO:0120197]; outer dynein arm assembly [GO:0036158]; protein localization to motile cilium [GO:0120229]	hit with GO BP
GN009804	Chromosome_4A	40892	14	992	35.89699696762203	0.7531852145189716	17.64431084210099	986	0.17545638945233266	64.39273190946764	70	0.6571428571428571	14.46298023732564	916	0.13864628820960698	1.753970135103105	68	0	sparse (10-50%)	Q59E55	NGFI-A-binding protein homolog (dNAB)	locomotory behavior [GO:0007626]; negative regulation of DNA-templated transcription [GO:0045892]; neuroblast development [GO:0014019]; neuron development [GO:0048666]; regulation of DNA-templated transcription [GO:0006355]; wing disc pattern formation [GO:0035222]	hit with GO BP
GN009805	Chromosome_4A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	55.55555555555556	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN009806	Chromosome_4A	15006	13	228	36.252165800346525	0.4649862007320197	83.1486057183198	228	0.9254385964912281	81.6137566137566	40	0.825	83.44120366478944	188	0.9468085106382979	20.06149116064566	28	0	methylated (>=50%)	A1A4L0	Sorting nexin-4	endocytic recycling [GO:0032456]; positive regulation of autophagosome assembly [GO:2000786]; protein transport [GO:0015031]	hit with GO BP
GN009807	Chromosome_4A	1626	2	49	40.77490774907749	0.7349322018263997	37.45583038869258	15	0.3333333333333333	37.45583038869258	15	0.3333333333333333	NA	NA	NA	13.787638668779715	30	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009808	Chromosome_4A	474	1	11	45.358649789029535	0.4906832298136646	20	9	0	20	9	0	NA	NA	NA	11.119812059514487	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009809	Chromosome_4A	5902	9	92	39.1562182311081	0.4067905304165418	95.33948426780222	92	1	95.77464788732394	50	1	94.92619926199262	42	1	39.90963855421687	9	0.1111111111111111	methylated (>=50%)	A2AG06	Meiosis-specific coiled-coil domain-containing protein MEIOC (Meiosis-specific with coiled-coil domain protein)	chromosome organization involved in meiotic cell cycle [GO:0070192]; double-strand break repair [GO:0006302]; female meiosis I [GO:0007144]; germline cell cycle switching, mitotic to meiotic cell cycle [GO:0051729]; male meiosis I [GO:0007141]; metaphase chromosome alignment [GO:0051310]; mRNA stabilization [GO:0048255]; oocyte development [GO:0048599]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]; synaptonemal complex assembly [GO:0007130]	hit with GO BP
GN009810	Chromosome_4A	39509	26	517	35.422308841023565	0.41952419255856	84.25722518615731	514	0.9513618677042801	89.20875711084295	127	0.968503937007874	83.27521367521368	387	0.9457364341085271	0.4870738104158861	45	0	methylated (>=50%)	Q14674	Separin (EC 3.4.22.49) (Caspase-like protein ESPL1) (Extra spindle poles-like 1 protein) (Separase)	apoptotic process [GO:0006915]; establishment of mitotic spindle localization [GO:0040001]; maintenance of meiotic sister chromatid cohesion [GO:0034090]; maintenance of mitotic sister chromatid cohesion [GO:0034088]; mitotic cytokinesis [GO:0000281]; mitotic sister chromatid segregation [GO:0000070]; mitotic sister chromatid separation [GO:0051306]; negative regulation of sister chromatid cohesion [GO:0045875]; positive regulation of mitotic metaphase/anaphase transition [GO:0045842]; proteolysis [GO:0006508]	hit with GO BP
GN009811	Chromosome_4A	567	2	23	41.44620811287478	0.9713242961418144	0.32615786040443573	23	0	0.42105263157894735	16	0	0.17152658662092624	7	0	2.1954944635357005	65	0	unmethylated (<10%)	Q5ZKP6	Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)	adenosine catabolic process [GO:0006154]; hypoxanthine salvage [GO:0043103]; inosine biosynthetic process [GO:0046103]; negative regulation of adenosine receptor signaling pathway [GO:0060169]; purine ribonucleoside monophosphate biosynthetic process [GO:0009168]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; T cell activation [GO:0042110]	hit with GO BP
GN009812	Chromosome_4A	25031	18	707	36.83033039031601	0.8370943074860432	0.7046481499036243	687	0	0.5065856129685917	100	0	0.7328784432650999	587	0	0.934094447327452	45	0	unmethylated (<10%)	Q8IW92	Beta-galactosidase-1-like protein 2 (EC 3.2.1.23)	galactose catabolic process [GO:0019388]	hit with GO BP
GN009813	Chromosome_4A	420	1	14	43.57142857142857	0.7028448481950753	0.44493882091212456	14	0	0.44493882091212456	14	0	NA	NA	NA	0.5697151424287856	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009814	Chromosome_4A	324	1	12	46.2962962962963	0.6912	1.0869565217391304	12	0	1.0869565217391304	12	0	NA	NA	NA	1.8662886841483581	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009815	Chromosome_4A	7551	2	204	35.42577142100384	0.8616603532104652	1.2054507337526206	203	0	0.16025641025641027	22	0	1.2657058388765705	181	0	0.6178039876439202	53	0	unmethylated (<10%)	Q0V7M8	Protein FAM167A	NA	hit, no GO BP
GN009816	Chromosome_4A	1113	1	45	42.94699011680144	0.8949343339587242	0	9	0	0	9	0	NA	NA	NA	0.5755395683453237	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009817	Chromosome_4A	3716	3	83	36.67922497308934	0.6649419414369548	0.5521811154058531	83	0	0.5961251862891207	17	0	0.542189088444595	66	0	0.6216696269982238	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009818	Chromosome_4A	8912	4	123	35.45780969479354	0.4396749334476732	84.37007874015748	122	0.9836065573770492	87.89808917197452	13	1	84.05320366132723	109	0.981651376146789	13.053348467650398	41	0.0975609756097561	methylated (>=50%)	Q5ZKQ7	Glucose-induced degradation protein 8 homolog	positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of cell population proliferation [GO:0008284]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN009819	Chromosome_4A	29999	13	428	36.514550485016166	0.4297459728380781	68.20934469006941	407	0.7469287469287469	90.78363725973387	125	0.96	62.57306343444287	282	0.6524822695035462	76.86206896551724	41	0.8048780487804879	methylated (>=50%)	Q9C0H5	Rho GTPase-activating protein 39	postsynapse organization [GO:0099173]; regulation of small GTPase mediated signal transduction [GO:0051056]; signal transduction [GO:0007165]	hit with GO BP
GN009820	Chromosome_4A	2743	4	62	39.30003645643456	0.5872018948902186	56.01586602027325	62	0.4032258064516129	86.08198284080076	27	0.7407407407407407	30.16393442622951	35	0.14285714285714285	52.42718446601942	27	0.5925925925925926	methylated (>=50%)	Q86YI8	PHD finger protein 13 (Survival time-associated PHD finger protein in ovarian cancer 1) (SPOC1)	chromosome segregation [GO:0007059]; DNA damage response [GO:0006974]; mitotic cell cycle [GO:0000278]; mitotic chromosome condensation [GO:0007076]	hit with GO BP
GN009821	Chromosome_4A	10003	13	171	34.55963211036689	0.574951530324135	75.84238756704717	171	0.8771929824561403	85.5	39	0.8974358974358975	74.30234412374422	132	0.8712121212121212	60.196779964221825	39	0.5384615384615384	methylated (>=50%)	Q5ZIM6	Protein AATF (Apoptosis-antagonizing transcription factor)	NA	hit, no GO BP
GN020608	Chromosome_4A	1686	1	52	43.357058125741396	0.66183531116949	NA	0	NA	NA	NA	NA	NA	NA	NA	57.142857142857146	3	0.6666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN020609	Chromosome_4A	727	2	15	40.44016506189821	0.5250866718027735	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009822	Chromosome_4A	13162	8	298	36.369852605986935	0.6866025299225255	78.69441533163648	296	0.847972972972973	94.1637630662021	25	1	77.75424850442056	271	0.8339483394833949	96.50688919076266	64	1	methylated (>=50%)	Q9JK81	MYG1 exonuclease (EC 3.1.-.-) (Protein Gamm1)	locomotory exploration behavior [GO:0035641]; mitochondrial RNA metabolic process [GO:0000959]; mRNA processing [GO:0006397]; rRNA processing [GO:0006364]	hit with GO BP
GN009823	Chromosome_4A	4210	3	122	42.019002375296914	0.6639365665371421	9.980430528375734	121	0.09917355371900827	11.995933581836665	106	0.11320754716981132	0.4792332268370607	15	0	1.8471156578573458	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009824	Chromosome_4A	4714	4	144	42.46924056003394	0.6833589704354549	0.8011049723756906	135	0	0.9294696555494806	103	0	0.6700167504187605	32	0	0.4852798447104497	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009825	Chromosome_4A	1983	2	65	45.284921835602624	0.6444717776411117	0.7371007371007371	50	0	0.7304601899196493	47	0	0.7722007722007722	3	0	0.6338231057332181	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009826	Chromosome_4A	1229	3	36	40.76484947111473	0.7051061388410786	1.873767258382643	36	0	1.954732510288066	34	0	0	2	0	0.6046645551396487	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009827	Chromosome_4A	1652	4	25	40.012106537530265	0.3792888105209022	3.3298647242455774	25	0	3.2967032967032965	19	0	3.4334763948497855	6	0	1.2987012987012987	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009828	Chromosome_4A	56790	6	1673	37.26184187356929	0.8487759546913406	0.788895115747726	1580	0	0.8860011813349085	48	0	0.7864738283896433	1532	0	0.4704875962360992	46	0	unmethylated (<10%)	Q9DF60	Myeloid differentiation primary response protein MyD88-A (Toll/IL-1 receptor binding protein MyD88-A)	defense response to Gram-positive bacterium [GO:0050830]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN009829	Chromosome_4A	783	3	35	40.61302681992337	1.0840156639373442	NA	0	NA	NA	NA	NA	NA	NA	NA	0	5	0	NA	C8BKC7	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; defense response to virus [GO:0051607]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor 8 signaling pathway [GO:0034158]	hit with GO BP
GN009830	Chromosome_4A	915	3	42	41.74863387978142	1.0548418972332017	0.4329004329004329	12	0	0.4329004329004329	12	0	NA	NA	NA	0	4	0	unmethylated (<10%)	C8BKC7	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; defense response to virus [GO:0051607]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor 8 signaling pathway [GO:0034158]	hit with GO BP
GN009831	Chromosome_4A	423	1	22	47.04491725768322	0.9816455696202532	0.199203187250996	22	0	0.199203187250996	22	0	NA	NA	NA	0.2903225806451613	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009832	Chromosome_4A	699	1	32	44.92131616595136	0.9104526212959948	1.4035087719298245	32	0	1.4035087719298245	32	0	NA	NA	NA	0.3669724770642202	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009833	Chromosome_4A	21835	6	337	37.99862605907946	0.43287446867187734	65.73766739155316	334	0.6946107784431138	90.311986863711	83	0.927710843373494	60.551666782174784	251	0.6175298804780877	62.648221343873516	9	0.6666666666666666	methylated (>=50%)	O14490	Disks large-associated protein 1 (DAP-1) (Guanylate kinase-associated protein) (hGKAP) (PSD-95/SAP90-binding protein 1) (SAP90/PSD-95-associated protein 1) (SAPAP1)	chemical synaptic transmission [GO:0007268]; modulation of chemical synaptic transmission [GO:0050804]	hit with GO BP
GN009834	Chromosome_4A	37242	7	820	35.28543042801139	0.7076676344952343	88.20905693105087	784	0.9323979591836735	70.40289256198348	45	0.7333333333333333	88.95054956873373	739	0.9445196211096076	12.16696269982238	44	0.06818181818181818	methylated (>=50%)	C8BKC7	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; defense response to virus [GO:0051607]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor 8 signaling pathway [GO:0034158]	hit with GO BP
GN009835	Chromosome_4A	28206	11	426	35.049280294972704	0.4926345013591798	87.90956263899184	426	0.9647887323943662	91.24474906035817	110	0.9636363636363636	87.2378323017322	316	0.9651898734177216	19.1912025540972	52	0.17307692307692307	methylated (>=50%)	P35569	Insulin receptor substrate 1 (IRS-1)	cellular response to fatty acid [GO:0071398]; cellular response to insulin stimulus [GO:0032869]; cytokine-mediated signaling pathway [GO:0019221]; insulin receptor signaling pathway [GO:0008286]; insulin-like growth factor receptor signaling pathway [GO:0048009]; lipid catabolic process [GO:0016042]; mammary gland development [GO:0030879]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of insulin secretion [GO:0046676]; negative regulation of somatostatin secretion [GO:0090275]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of cell migration [GO:0030335]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of fatty acid beta-oxidation [GO:0032000]; positive regulation of glucagon secretion [GO:0070094]; positive regulation of glucose metabolic process [GO:0010907]; positive regulation of glycogen biosynthetic process [GO:0045725]; positive regulation of insulin receptor signaling pathway [GO:0046628]; positive regulation of mesenchymal cell proliferation [GO:0002053]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of phosphorylation [GO:0042327]; protein localization to nucleus [GO:0034504]; regulation of gene expression [GO:0010468]; response to caffeine [GO:0031000]; response to ethanol [GO:0045471]; response to insulin [GO:0032868]	hit with GO BP
GN009836	Chromosome_4A	16769	4	433	36.26334307352853	0.7857366859359072	78.49167180752622	415	0.927710843373494	70.7740916271722	21	0.7142857142857143	78.8052898504205	394	0.9390862944162437	71.4327743453957	45	0.7333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009837	Chromosome_4A	8803	6	115	33.46586391003067	0.4711421396339375	87.47653526414588	114	0.956140350877193	82.75391956373551	30	0.9	88.6329494241362	84	0.9761904761904762	63.758389261744966	34	0.6764705882352942	methylated (>=50%)	Q9VPD5	Transcription termination factor 3, mitochondrial (Mitochondrial transcription termination factor 3) (mTerf3)	mitochondrial large ribosomal subunit assembly [GO:1902775]; mitochondrial ribosome assembly [GO:0061668]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of mitochondrial transcription [GO:1903108]	hit with GO BP
GN009838	Chromosome_4A	1424	2	32	37.21910112359551	0.6491168091168091	0.30441400304414	23	0	0	8	0	0.3968253968253968	15	0	0.6	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009839	Chromosome_4A	360	1	2	39.166666666666664	0.14545454545454545	0	1	0	0	1	0	NA	NA	NA	0.704225352112676	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009840	Chromosome_4A	318	1	14	43.39622641509434	0.9512820512820512	1.3793103448275863	14	0	1.3793103448275863	14	0	NA	NA	NA	0.5706134094151213	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009841	Chromosome_4A	24493	11	655	35.75307230637325	0.8368729653180228	0.936885169107773	613	0	0.6903605216057275	94	0	0.9711846318036286	519	0	2.456538170823885	46	0	unmethylated (<10%)	B7Z0W9	Proton channel OtopLc (Otopetrin-Lc) (DmOtopLc)	proton transmembrane transport [GO:1902600]	hit with GO BP
GN009842	Chromosome_4A	558	1	26	41.577060931899645	1.0810730253353205	0.970873786407767	20	0	0.970873786407767	20	0	NA	NA	NA	5.096153846153846	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009843	Chromosome_4A	5264	3	128	35.86626139817629	0.7600483693396142	3.298045602605863	127	0	0.7532956685499058	19	0	3.495685242065233	108	0	2.2737405260811414	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009844	Chromosome_4A	15391	10	231	34.39672535897603	0.5087472296885803	77.53058954393771	224	0.7901785714285714	93.296853625171	20	1	75.74678842284476	204	0.7696078431372549	82.53424657534246	15	0.7333333333333333	methylated (>=50%)	Q9W6I0	Ubiquinol-cytochrome-c reductase complex assembly factor 1 (Basic FGF-repressed Zic-binding protein homolog) (Ubiquinol-cytochrome c reductase complex chaperone CBP3 homolog) (Zic3-binding protein)	mitochondrial respiratory chain complex III assembly [GO:0034551]	hit with GO BP
GN009845	Chromosome_4A	2436	8	59	38.25944170771757	0.6631935952749002	9.165873771011736	38	0	9.043478260869565	32	0	9.495896834701055	6	0	14.994446501295817	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009846	Chromosome_4A	17369	11	241	34.90701825090679	0.45723691828013086	81.48121798520205	237	0.9071729957805907	66.2873399715505	33	0.7575757575757576	83.1699604743083	204	0.9313725490196079	10.058977719528178	41	0	methylated (>=50%)	Q8BKZ9	Pyruvate dehydrogenase protein X component, mitochondrial (Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex) (Lipoyl-containing pyruvate dehydrogenase complex component X)	pyruvate decarboxylation to acetyl-CoA [GO:0006086]	hit with GO BP
GN009847	Chromosome_4A	3431	3	114	38.70591664237831	0.8873356382544306	1.8055847155154314	106	0	5.098039215686274	39	0	0.9083622762489981	67	0	0.3595505617977528	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009848	Chromosome_4A	5304	12	177	38.55580693815988	0.9023581450873419	0.5486417770640974	176	0	0.608457560085184	99	0	0.5016722408026756	77	0	NA	NA	NA	unmethylated (<10%)	A2RU67	Protein FAM234B	NA	hit, no GO BP
GN009849	Chromosome_4A	2022	1	66	39.317507418397625	0.8568346709470305	0.39463299131807417	66	0	0.39463299131807417	66	0	NA	NA	NA	1.4805278403604762	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009850	Chromosome_4A	532	2	17	36.46616541353384	0.9737295434969854	0.31446540880503143	17	0	0.1485884101040119	11	0	0.7117437722419929	6	0	2.4363833243096913	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009851	Chromosome_4A	453	1	12	43.92935982339956	0.6581113801452785	0.8968609865470852	12	0	0.8968609865470852	12	0	NA	NA	NA	0.46210720887245843	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009852	Chromosome_4A	21838	14	376	35.928198552981044	0.5356772140647196	84.76583234657629	376	0.9388297872340425	93.05109489051095	74	0.9459459459459459	83.41877907528719	302	0.9370860927152318	0.517799352750809	86	0	methylated (>=50%)	Q9VFC8	Glycogen [starch] synthase (EC 2.4.1.11) (Glycogen synthase)	cellular response to starvation [GO:0009267]; cellular response to sucrose stimulus [GO:0071329]; glycogen biosynthetic process [GO:0005978]; glycogen biosynthetic process via UDP-glucose [GO:0160249]; response to sucrose [GO:0009744]	hit with GO BP
GN009853	Chromosome_4A	10120	6	348	37.33201581027668	0.9869692681889225	1.5020538287045553	348	0	0.6925207756232687	56	0	1.6260162601626016	292	0	0.6487761722205839	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009854	Chromosome_4A	360	1	1	39.166666666666664	0.07272727272727272	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4563106796116505	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009855	Chromosome_4A	1123	3	27	38.46838824577026	0.650107204116638	0.4648074369189907	27	0	0.3184713375796178	16	0	0.5694760820045558	11	0	0.8706467661691543	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009856	Chromosome_4A	25966	17	213	34.62219825926211	0.2749239725652543	81.49405772495756	212	0.910377358490566	88.97795591182364	30	0.9333333333333333	80.40455120101137	182	0.9065934065934066	0.3899142188718482	53	0	methylated (>=50%)	Q9QZH7	F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat protein 20) (F-box/LRR-repeat protein 2-like)	behavioral fear response [GO:0001662]; regulation of protein catabolic process at presynapse, modulating synaptic transmission [GO:0099575]; regulation of synaptic vesicle exocytosis [GO:2000300]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN009857	Chromosome_4A	26823	19	382	35.540394437609514	0.4566513944233761	85.15064002497658	377	0.9522546419098143	83.90137781000725	50	0.92	85.30132073821395	327	0.9571865443425076	0.3640776699029126	40	0	methylated (>=50%)	E7F6H7	Dynein, cytoplasmic 1, intermediate chain 2a	mitotic spindle organization [GO:0007052]; transport along microtubule [GO:0010970]	hit with GO BP
GN009858	Chromosome_4A	15315	7	409	36.820111002285344	0.7880375912890868	1.8390295241788068	399	0.022556390977443608	14.388489208633093	21	0.19047619047619047	1.2311980951274755	378	0.013227513227513227	66.80294358135731	23	0.7391304347826086	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009859	Chromosome_4A	9019	8	242	39.28373433861847	0.6955002437726445	0.8476491862567812	233	0	0.9473060982830077	49	0	0.8241374493644363	184	0	0.47393364928909953	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009860	Chromosome_4A	7620	9	209	36.58792650918635	0.8266293642410574	1.2748133309051175	209	0	1.5091342335186657	50	0	1.2051039697542534	159	0	0.48247024766806046	58	0	unmethylated (<10%)	Q28262	Platelet-activating factor acetylhydrolase (PAF acetylhydrolase) (EC 3.1.1.47) (1-alkyl-2-acetylglycerophosphocholine esterase) (2-acetyl-1-alkylglycerophosphocholine esterase) (LDL-associated phospholipase A2) (LDL-PLA(2)) (PAF 2-acylhydrolase)	phosphatidylcholine catabolic process [GO:0034638]; platelet activating factor catabolic process [GO:0062234]; platelet activating factor metabolic process [GO:0046469]	hit with GO BP
GN009861	Chromosome_4A	811	3	19	37.85450061652281	0.6543099787685775	1.075268817204301	19	0	1.2965964343598055	16	0	0	3	0	0.927246790299572	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009862	Chromosome_4A	507	2	21	41.222879684418146	0.9755360087960417	0.8974358974358975	21	0	0.9602194787379973	20	0	0	1	0	0.8522727272727273	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009863	Chromosome_4A	1398	1	48	41.3447782546495	0.8036792181661397	1.0832769126607988	48	0	1.0832769126607988	48	0	NA	NA	NA	3.512396694214876	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009864	Chromosome_4A	1825	2	53	38.68493150684932	0.7763277230663039	0.8060182697474476	53	0	0.7648183556405354	49	0	1.0273972602739727	4	0	0.6076975016880486	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009865	Chromosome_4A	20361	13	627	36.122980207258976	0.9440801879885737	1.9102305352625146	625	0	0.6692913385826772	69	0	2.006801678973008	556	0	0.4163197335553705	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009866	Chromosome_4A	243	1	12	56.37860082304527	0.6241438356164384	1.0582010582010581	12	0	1.0582010582010581	12	0	NA	NA	NA	0.548159749412686	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009867	Chromosome_4A	27573	29	291	36.26373626373626	0.32162825269213957	70.3883495145631	288	0.8368055555555556	71.01661779081134	90	0.8555555555555555	70.17731078640617	198	0.8282828282828283	1.216685979142526	34	0	methylated (>=50%)	A3RL54	Sperm-specific sodium:proton exchanger (Solute carrier family 9 member C1) (Voltage-gated Na(+)/H(+) exchanger)	regulation of intracellular pH [GO:0051453]; sodium ion import across plasma membrane [GO:0098719]	hit with GO BP
GN009868	Chromosome_4A	9124	12	114	34.995615957913195	0.4082772090993091	87.61593016912165	112	1	89.10751932536894	33	1	87.25672702656964	79	1	25.486725663716815	42	0.2857142857142857	methylated (>=50%)	Q2HJ55	Sorting and assembly machinery component 50 homolog	cristae formation [GO:0042407]; protein insertion into mitochondrial outer membrane [GO:0045040]	hit with GO BP
GN009869	Chromosome_4A	8282	6	116	33.74788698382034	0.4950092642400335	83.72191606612972	116	0.853448275862069	48.1	22	0.45454545454545453	87.94452347083926	94	0.9468085106382979	0.945273631840796	44	0	methylated (>=50%)	A2BGM5	Forkhead box protein N4	amacrine cell differentiation [GO:0035881]; atrioventricular canal development [GO:0036302]; heart looping [GO:0001947]; heart valve development [GO:0003170]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of heart contraction [GO:0008016]; retina layer formation [GO:0010842]; ventral spinal cord interneuron fate commitment [GO:0060579]	hit with GO BP
GN012940	Chromosome_4A	1804	4	16	35.6430155210643	0.28231611893583725	45.52075746540422	16	0.5	46.508058326937835	15	0.5333333333333333	27.142857142857142	1	0	56.91676436107855	28	0.5714285714285714	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009870	Chromosome_4A	1164	1	39	42.09621993127148	0.7564865270209469	0.6917755572636434	39	0	0.6917755572636434	39	0	NA	NA	NA	0.47493403693931396	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009871	Chromosome_4A	10355	8	117	37.382906808305165	0.32781755308786287	73.62270450751252	114	0.8333333333333334	84.25011753643629	41	0.9512195121951219	68.55670103092784	73	0.7671232876712328	88.17980022197558	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009872	Chromosome_4A	375	1	10	41.06666666666667	0.648228176318064	0.5649717514124294	10	0	0.5649717514124294	10	0	NA	NA	NA	0.7726718178121188	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009873	Chromosome_4A	18861	16	218	39.3987593446795	0.2999371923904314	89.44755466356818	210	1	91.30434782608695	98	1	87.83996846669294	112	1	63.80597014925373	49	0.5510204081632653	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009874	Chromosome_4A	43379	26	522	35.035385785748865	0.40322234008778324	84.17687621342974	458	0.8973799126637555	88.05503439649782	30	0.9333333333333333	83.95755968169762	428	0.8948598130841121	0.8250257820556892	39	0	methylated (>=50%)	P27641	DNA repair protein Ku80 (EC 4.2.99.18) (EC 5.6.2.4) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit) (CTC box-binding factor 85 kDa subunit) (CTC85) (CTCBF) (DNA repair protein XRCC5) (Ku autoantigen protein p86 homolog) (Ku80) (Nuclear factor IV) (X-ray repair cross-complementing protein 5)	activation of innate immune response [GO:0002218]; cell population proliferation [GO:0008283]; cellular hyperosmotic salinity response [GO:0071475]; cellular response to gamma radiation [GO:0071480]; cellular response to leukemia inhibitory factor [GO:1990830]; cellular response to X-ray [GO:0071481]; DNA damage response [GO:0006974]; double-strand break repair [GO:0006302]; double-strand break repair via nonhomologous end joining [GO:0006303]; hematopoietic stem cell differentiation [GO:0060218]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of t-circle formation [GO:1904430]; positive regulation of neurogenesis [GO:0050769]; protein localization to chromosome, telomeric region [GO:0070198]; recombinational repair [GO:0000725]; regulation of smooth muscle cell proliferation [GO:0048660]; small-subunit processome assembly [GO:0034462]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN009875	Chromosome_4A	935	3	37	39.893048128342244	1.0067807461730982	0.4699248120300752	37	0	0.4700352526439483	30	0	0.4694835680751174	7	0	9.87963891675025	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009876	Chromosome_4A	1920	4	64	38.541666666666664	0.8990671300530455	0.7238883143743536	64	0	0.3094059405940594	41	0	1.245136186770428	23	0	1.8625561978163134	71	0	unmethylated (<10%)	Q9BDB7	Interferon-induced protein 44-like [Cleaved into: Minor histocompatibility antigen HA-28 (HLA-HA28) (IFL8)]	cellular response to virus [GO:0098586]; defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN009877	Chromosome_4A	3827	6	112	39.717794617193626	0.7446883551231377	77.02358730697438	112	0.7946428571428571	72.5828729281768	63	0.6825396825396826	81.31464798131465	49	0.9387755102040817	12.840531561461795	65	0	methylated (>=50%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN009878	Chromosome_4A	3612	6	112	40.14396456256922	0.7723607038123167	0.6430041152263375	112	0	0.5865102639296188	66	0	0.7057546145494028	46	0	0.9158557527189468	52	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN009879	Chromosome_4A	1051	2	40	41.294005708848715	0.8946774777075486	32.51262626262626	40	0.275	46.80589680589681	21	0.5238095238095238	17.4025974025974	19	0	4.231560387893036	71	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009880	Chromosome_4A	32334	13	477	34.72505721531515	0.4896440653429438	73.60610005579319	455	0.810989010989011	82.92098962490024	51	0.9019607843137255	72.6485910004512	404	0.7995049504950495	0.8323874385168369	45	0	methylated (>=50%)	P34416	LIM and SH3 domain protein F42H10.3	NA	hit, no GO BP
GN009881	Chromosome_4A	7990	5	119	34.8811013767209	0.49397551553086744	82.66806722689076	114	0.8245614035087719	71.24463519313305	16	0.625	83.82246638716207	98	0.8571428571428571	0.6219765031098825	31	0	methylated (>=50%)	Q9GNE2	Large ribosomal subunit protein uL14 (60S ribosomal protein L23) (AeRpL17A) (L17A)	translation [GO:0006412]	hit with GO BP
GN009882	Chromosome_4A	8527	5	217	38.067315585786325	0.7054649198423267	9.119170984455959	214	0.0514018691588785	32.08955223880597	24	0.2916666666666667	4.526237254414325	190	0.021052631578947368	0.6772009029345373	48	0	unmethylated (<10%)	Q03206	Ras-related protein ced-10 (EC 3.6.5.2) (CErac1) (Cell death protein 10) (Cell-corpse engulfment protein ced-10) (Ras-related protein rac-1)	actin filament organization [GO:0007015]; axon extension involved in axon guidance [GO:0048846]; axon regeneration [GO:0031103]; body morphogenesis [GO:0010171]; cell chemotaxis [GO:0060326]; cell migration [GO:0016477]; chemorepulsion of axon [GO:0061643]; distal tip cell migration [GO:0097628]; dorsal/ventral axon guidance [GO:0033563]; embryonic body morphogenesis [GO:0010172]; embryonic morphogenesis [GO:0048598]; engulfment of apoptotic cell [GO:0043652]; establishment of mitotic spindle orientation [GO:0000132]; establishment or maintenance of actin cytoskeleton polarity [GO:0030950]; establishment or maintenance of cell polarity [GO:0007163]; gastrulation [GO:0007369]; left/right axis specification [GO:0070986]; motor neuron axon guidance [GO:0008045]; negative regulation of microtubule polymerization [GO:0031115]; nematode larval development [GO:0002119]; nematode male tail tip morphogenesis [GO:0045138]; netrin-activated signaling pathway [GO:0038007]; neuron migration [GO:0001764]; neuron projection morphogenesis [GO:0048812]; positive regulation of distal tip cell migration [GO:1903356]; positive regulation of engulfment of apoptotic cell [GO:1901076]; Rac protein signal transduction [GO:0016601]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; regulation of dorsal/ventral axon guidance [GO:1905815]; regulation of phagocytosis [GO:0050764]; regulation of synaptic transmission, GABAergic [GO:0032228]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN009883	Chromosome_4A	4940	9	141	37.08502024291498	0.8329357235362279	1.150427052466446	141	0	0.6035458317615994	67	0	1.6202203499675956	74	0	0.9643201542912246	44	0	unmethylated (<10%)	P34147	Rho-related protein racA (EC 3.6.5.2)	actin filament organization [GO:0007015]; establishment or maintenance of cell polarity [GO:0007163]; mitotic cytokinesis [GO:0000281]; regulation of cell shape [GO:0008360]; response to bacterium [GO:0009617]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN009884	Chromosome_4A	4602	4	124	36.027813993915686	0.8305831495753553	0.9249915909855365	124	0	0.8587786259541985	31	0	0.9391588403429971	93	0	1.0587612493382743	45	0	unmethylated (<10%)	A1Z6E0	Protein gustavus	cuticle pattern formation [GO:0035017]; dorsal appendage formation [GO:0046843]; germ cell development [GO:0007281]; germ cell migration [GO:0008354]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; oocyte anterior/posterior axis specification [GO:0007314]; pole plasm assembly [GO:0007315]; positive regulation of protein catabolic process [GO:0045732]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; wing disc morphogenesis [GO:0007472]	hit with GO BP
GN021403	Chromosome_4A	926	2	13	38.76889848812095	0.3825959827103992	8.333333333333334	2	0	8.333333333333334	2	0	NA	NA	NA	1.0448171569975255	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009885	Chromosome_4A	4271	5	114	35.026925778506204	0.872358837915558	0.7830745981590878	114	0	0.966542750929368	23	0	0.741489720256151	91	0	1.285189718482252	31	0	unmethylated (<10%)	P34147	Rho-related protein racA (EC 3.6.5.2)	actin filament organization [GO:0007015]; establishment or maintenance of cell polarity [GO:0007163]; mitotic cytokinesis [GO:0000281]; regulation of cell shape [GO:0008360]; response to bacterium [GO:0009617]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN009886	Chromosome_4A	4122	5	71	37.06938379427462	0.5023317605178105	82.67370272647318	70	0.8571428571428571	89.87566607460036	10	1	81.65621079046424	60	0.8333333333333334	0.3795620437956204	66	0	methylated (>=50%)	Q3T0K9	DAZ-associated protein 2 (Deleted in azoospermia-associated protein 2) (Proline-rich transcript in brain protein)	protein destabilization [GO:0031648]; stress granule assembly [GO:0034063]	hit with GO BP
GN009887	Chromosome_4A	20821	7	342	34.74857115412324	0.5445436751009666	42.08747975005786	341	0.4574780058651026	39.77987421383648	19	0.42105263157894735	42.23183986622732	322	0.45962732919254656	57.79816513761468	5	0.6	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009888	Chromosome_4A	6263	7	155	35.82947469263931	0.7724297563273412	0.5329070077271516	153	0	0.5813953488372093	59	0	0.5145167217934583	94	0	1.2337445815271757	62	0	unmethylated (<10%)	O75581	Low-density lipoprotein receptor-related protein 6 (LRP-6)	canonical Wnt signaling pathway [GO:0060070]; cell-cell adhesion [GO:0098609]; cellular response to cholesterol [GO:0071397]; chemical synaptic transmission [GO:0007268]; dopaminergic neuron differentiation [GO:0071542]; midbrain dopaminergic neuron differentiation [GO:1904948]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; nervous system development [GO:0007399]; neural crest cell differentiation [GO:0014033]; neural crest formation [GO:0014029]; positive regulation of cell cycle [GO:0045787]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to plasma membrane [GO:0072659]; response to peptide hormone [GO:0043434]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN009889	Chromosome_4A	204	1	16	53.431372549019606	1.1262939958592133	1.1799410029498525	16	0	1.1799410029498525	16	0	NA	NA	NA	0.5371530886302597	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009890	Chromosome_4A	573	1	18	41.8848167539267	0.8334545454545454	0.37082818294190356	18	0	0.37082818294190356	18	0	NA	NA	NA	0.9034443817052513	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009891	Chromosome_4A	18533	9	476	37.948524254033345	0.7246654821255039	1.4018472502227015	475	0	2.711124961047055	105	0	1.1699779249448123	370	0	0.7954183900731785	63	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN009892	Chromosome_4A	6321	8	80	34.51985445340927	0.4302205978065283	87.70744886144345	79	1	87.5	31	1	87.80837636259324	48	1	91.16321009918846	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009893	Chromosome_4A	20827	14	264	36.39986555912998	0.38391105078383564	85.17465282714821	258	0.9806201550387597	87.48984565393988	22	1	85.03120595933159	236	0.9788135593220338	85.1400730816078	21	0.9523809523809523	methylated (>=50%)	Q96KP4	Cytosolic non-specific dipeptidase (EC 3.4.13.18) (CNDP dipeptidase 2) (Glutamate carboxypeptidase-like protein 1) (N-lactoyl-amino acid synthase/hydrolase) (EC 3.4.-.-) (Peptidase A) (Threonyl dipeptidase)	glutathione metabolic process [GO:0006749]; nonribosomal peptide biosynthetic process [GO:0019184]; proteolysis [GO:0006508]	hit with GO BP
GN009894	Chromosome_4A	21074	16	315	36.07763120432761	0.46311326504301353	85.84309754568687	315	0.9079365079365079	93.600812595226	146	0.9657534246575342	81.0930576070901	169	0.8579881656804734	84.50281425891183	47	0.9574468085106383	methylated (>=50%)	A6H619	PHD and RING finger domain-containing protein 1	mRNA processing [GO:0006397]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN009895	Chromosome_4A	633	1	16	46.91943127962085	0.5193313506307046	0.4914004914004914	16	0	0.4914004914004914	16	0	NA	NA	NA	0.3865267807840972	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009896	Chromosome_4A	4046	6	45	34.7256549678695	0.37141982864137085	59.590623968306375	45	0.7111111111111111	64.1025641025641	8	0.75	58.68358445678033	37	0.7027027027027027	57.64203787676714	37	0.6486486486486487	methylated (>=50%)	Q2TBS4	Ciliary microtubule-associated protein 3 (Protein pitchfork)	positive regulation of kinase activity [GO:0033674]; regulation of cell projection organization [GO:0031344]	hit with GO BP
GN009897	Chromosome_4A	14437	13	200	34.24534183002009	0.47260916135689274	84.52123830093592	198	0.9343434343434344	86.74568965517241	32	0.9375	84.21366311554794	166	0.9337349397590361	92.99340964273327	33	1	methylated (>=50%)	P32780	General transcription factor IIH subunit 1 (Basic transcription factor 2 62 kDa subunit) (BTF2 p62) (General transcription factor IIH polypeptide 1) (TFIIH basal transcription factor complex p62 subunit)	DNA repair [GO:0006281]; hormone-mediated signaling pathway [GO:0009755]; nucleotide-excision repair [GO:0006289]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0000079]; transcription by RNA polymerase I [GO:0006360]; transcription by RNA polymerase II [GO:0006366]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN009898	Chromosome_4A	8899	8	314	40.521406899651645	0.8683170667435662	0.6383148487991702	301	0	0.5524861878453039	66	0	0.6581532416502947	235	0	1.6157205240174672	44	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN009899	Chromosome_4A	1194	1	53	42.29480737018425	0.9979184407228687	0.5046863734679163	53	0	0.5046863734679163	53	0	NA	NA	NA	0.5991800693787449	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009900	Chromosome_4A	12238	12	227	33.95162608269325	0.6438777487389107	0.5582693649685974	227	0	0.6728971962616822	64	0	0.5165851005981512	163	0	0.5729564553093965	59	0	unmethylated (<10%)	Q9JI12	Vesicular glutamate transporter 2 (VGluT2) (Differentiation-associated BNPI) (Differentiation-associated Na(+)-dependent inorganic phosphate cotransporter) (Solute carrier family 17 member 6)	hippocampus development [GO:0021766]; hyaloid vascular plexus regression [GO:1990384]; L-glutamate import [GO:0051938]; L-glutamate transmembrane transport [GO:0015813]; neural retina development [GO:0003407]; neurotransmitter loading into synaptic vesicle [GO:0098700]; neurotransmitter uptake [GO:0001504]; phosphate ion homeostasis [GO:0055062]; phosphate ion transport [GO:0006817]; regulation of synapse structure or activity [GO:0050803]; sodium-dependent phosphate transport [GO:0044341]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN009901	Chromosome_4A	927	1	39	40.668824163969795	1.0190833239373098	0.6180469715698393	39	0	0.6180469715698393	39	0	NA	NA	NA	1.565377532228361	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009902	Chromosome_4A	9781	3	275	38.88150495859319	0.7461685616494979	1.0945989133908598	273	0	1.1662679425837321	209	0	0.8051529790660226	64	0	1.8583042973286876	26	0	unmethylated (<10%)	Q8R151	NFX1-type zinc finger-containing protein 1 (ATP- dependent RNA translocase ZNFX1) (EC 3.6.4.-) (E3 ubiquitin-protein and -ssRNA ligase ZNFX1) (EC 2.3.2.27)	activation of innate immune response [GO:0002218]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; negative regulation of viral genome replication [GO:0045071]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN009903	Chromosome_4A	513	1	11	39.57115009746589	0.5536695447409733	1.7525773195876289	11	0	1.7525773195876289	11	0	NA	NA	NA	2.356902356902357	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009904	Chromosome_4A	24271	6	348	35.766964690371225	0.44958713054531346	80.61704422869471	340	0.9294117647058824	77.96336206896552	32	0.9375	80.84806979689479	308	0.9285714285714286	69.23918992884511	35	0.6857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017458	Chromosome_4A	234	1	10	54.7008547008547	0.5763546798029556	1.1428571428571428	10	0	1.1428571428571428	10	0	NA	NA	NA	0.6428284451586983	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009905	Chromosome_4A	711	1	22	40.92827004219409	0.7399243140964995	3.089430894308943	22	0	3.089430894308943	22	0	NA	NA	NA	2.72	24	0	unmethylated (<10%)	Q5SVZ6	Zinc finger MYM-type protein 1	NA	hit, no GO BP
GN009906	Chromosome_4A	282	1	5	40.780141843971634	0.46473302570863545	1.2048192771084338	5	0	1.2048192771084338	5	0	NA	NA	NA	1.054481546572935	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009907	Chromosome_4A	264	1	11	45.07575757575758	0.825	0.45871559633027525	11	0	0.45871559633027525	11	0	NA	NA	NA	0.8539709649871904	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009908	Chromosome_4A	4156	8	124	36.742059672762274	0.8840732862142318	0.9608138658628486	113	0	1.053864168618267	59	0	0.8739985433357611	54	0	2.8864059590316575	37	0	unmethylated (<10%)	P37233	Peroxisome proliferator-activated receptor delta (PPAR-delta) (Nuclear receptor subfamily 1 group C member 2) (Peroxisome proliferator-activated receptor beta) (PPAR-beta)	cell differentiation [GO:0030154]; energy homeostasis [GO:0097009]; fatty acid metabolic process [GO:0006631]; hormone-mediated signaling pathway [GO:0009755]; intracellular receptor signaling pathway [GO:0030522]; negative regulation of cholesterol storage [GO:0010887]; negative regulation of inflammatory response [GO:0050728]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of fatty acid metabolic process [GO:0045923]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of skeletal muscle satellite cell proliferation [GO:0014842]	hit with GO BP
GN009909	Chromosome_4A	255	1	3	52.94117647058823	0.16798418972332016	0	3	0	0	3	0	NA	NA	NA	4.0853381752156155	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009910	Chromosome_4A	705	1	17	46.52482269503546	0.44800388755980863	0.24213075060532688	17	0	0.24213075060532688	17	0	NA	NA	NA	2.1710526315789473	58	0	unmethylated (<10%)	Q64337	Sequestosome-1 (STONE14) (Ubiquitin-binding protein p62)	aggrephagy [GO:0035973]; autophagy [GO:0006914]; brown fat cell proliferation [GO:0070342]; cellular response to stress [GO:0033554]; endosome organization [GO:0007032]; energy homeostasis [GO:0097009]; macroautophagy [GO:0016236]; membraneless organelle assembly [GO:0140694]; mitophagy [GO:0000423]; negative regulation of ferroptosis [GO:0110076]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of toll-like receptor 4 signaling pathway [GO:0034144]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pexophagy [GO:0000425]; positive regulation of autophagy [GO:0010508]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of protein localization to plasma membrane [GO:1903078]; positive regulation of protein phosphorylation [GO:0001934]; protein catabolic process [GO:0030163]; protein import into nucleus [GO:0006606]; protein K63-linked ubiquitination [GO:0070534]; protein localization to perinuclear region of cytoplasm [GO:1905719]; protein phosphorylation [GO:0006468]; protein targeting to vacuole involved in autophagy [GO:0071211]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of protein complex stability [GO:0061635]; response to ischemia [GO:0002931]; response to mitochondrial depolarisation [GO:0098780]; temperature homeostasis [GO:0001659]; toll-like receptor 4 signaling pathway [GO:0034142]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN009911	Chromosome_4A	591	2	8	39.424703891708965	0.35121081562917844	0	8	0	0	8	0	NA	NA	NA	0.6362672322375398	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009912	Chromosome_4A	930	1	16	47.31182795698925	0.3196494167687053	61.47403685092127	12	0.5833333333333334	61.47403685092127	12	0.5833333333333334	NA	NA	NA	60.30075187969925	23	0.6956521739130435	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009913	Chromosome_4A	682	2	8	42.961876832844574	0.27307307307307305	69.5852534562212	8	1	70.76923076923077	7	1	59.09090909090909	1	1	70.87378640776699	23	0.782608695652174	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009914	Chromosome_4A	396	1	8	42.92929292929293	0.43902439024390244	74.3801652892562	8	1	74.3801652892562	8	1	NA	NA	NA	75.86515513126491	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009915	Chromosome_4A	814	4	17	41.154791154791155	0.5150748157522519	26.96969696969697	17	0.35294117647058826	25.454545454545453	16	0.3125	52.72727272727273	1	1	1.036144578313253	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009916	Chromosome_4A	2006	3	23	34.74576271186441	0.3816211745244003	24.259313581695512	22	0.09090909090909091	30	8	0.25	23.057821922667614	14	0	58.78260869565217	13	0.7692307692307693	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009917	Chromosome_4A	394	2	15	44.67005076142132	0.76564321803342406	3.5250463821892395	15	0	4.112554112554113	13	0	0	2	0	0.5257228689447991	66	0	unmethylated (<10%)	P07314	Glutathione hydrolase 1 proenzyme (EC 3.4.19.13) (Gamma-glutamyltransferase 1) (Gamma-glutamyltranspeptidase 1) (GGT 1) (EC 2.3.2.2) (Leukotriene-C4 hydrolase) (EC 3.4.19.14) (CD antigen CD224) [Cleaved into: Glutathione hydrolase 1 heavy chain; Glutathione hydrolase 1 light chain]	amino acid metabolic process [GO:0006520]; cellular response to oxidative stress [GO:0034599]; fatty acid metabolic process [GO:0006631]; glutamate metabolic process [GO:0006536]; glutathione biosynthetic process [GO:0006750]; glutathione catabolic process [GO:0006751]; hepatoblast differentiation [GO:0061017]; hepatocyte differentiation [GO:0070365]; L-cysteine biosynthetic process [GO:0019344]; leukotriene D4 biosynthetic process [GO:1901750]; leukotriene metabolic process [GO:0006691]; liver regeneration [GO:0097421]; peptide modification [GO:0031179]; proteolysis [GO:0006508]; regulation of immune system process [GO:0002682]; regulation of inflammatory response [GO:0050727]; response to alcohol [GO:0097305]; response to estradiol [GO:0032355]; response to lipopolysaccharide [GO:0032496]; response to tumor necrosis factor [GO:0034612]; spermatogenesis [GO:0007283]; zymogen activation [GO:0031638]	hit with GO BP
GN009918	Chromosome_4A	417	1	21	44.36450839328537	1.0321782178217822	0.673924313115604	17	0	0.673924313115604	17	0	NA	NA	NA	0.42515500442869797	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009919	Chromosome_4A	14585	9	451	37.3808707576277	0.8851937604251405	0.572358453509904	430	0	0.379041248606466	122	0	0.637372525494901	308	0	0.6578947368421053	51	0	unmethylated (<10%)	Q13003	Glutamate receptor ionotropic, kainate 3 (GluK3) (Excitatory amino acid receptor 5) (EAA5) (Glutamate receptor 7) (GluR-7) (GluR7)	G protein-coupled glutamate receptor signaling pathway [GO:0007216]; glutamate receptor signaling pathway [GO:0007215]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; regulation of membrane potential [GO:0042391]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN009920	Chromosome_4A	2132	3	77	38.88367729831145	0.9566666666666667	0.6625891946992865	77	0	1.0031678986272439	50	0	0.3448275862068966	27	0	0.7346938775510204	89	0	unmethylated (<10%)	Q13002	Glutamate receptor ionotropic, kainate 2 (GluK2) (Excitatory amino acid receptor 4) (EAA4) (Glutamate receptor 6) (GluR-6) (GluR6)	chemical synaptic transmission [GO:0007268]; detection of cold stimulus involved in thermoception [GO:0120169]; glutamate receptor signaling pathway [GO:0007215]; modulation of chemical synaptic transmission [GO:0050804]; modulation of excitatory postsynaptic potential [GO:0098815]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; neuron apoptotic process [GO:0051402]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of synaptic transmission [GO:0050806]; receptor clustering [GO:0043113]; regulation of JNK cascade [GO:0046328]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN009921	Chromosome_4A	13757	23	225	37.16653340117758	0.48032831454585573	93.3080808080808	203	0.9901477832512315	96.46812331637234	78	1	91.7900790797987	125	0.984	97.5	1	1	methylated (>=50%)	P53621	Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP) (HEP-COP) (HEPCOP) [Cleaved into: Xenin (Xenopsin-related peptide); Proxenin]	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; pancreatic juice secretion [GO:0030157]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN009922	Chromosome_4A	11391	7	321	35.185672899657625	0.9107143924570709	5.20218210449356	321	0.003115264797507788	0.7553747821034282	48	0	5.678704856787048	273	0.003663003663003663	0.40106951871657753	66	0	unmethylated (<10%)	A4D9B0	Hercynylcysteine sulfoxide lyase (EC 4.4.1.-)	selenoneine biosynthetic process [GO:1903257]	hit with GO BP
GN009923	Chromosome_4A	7973	7	185	33.40022576194657	0.8331281115111367	2.1308312872676254	184	0	0.7640878701050621	44	0	2.438238453276047	140	0	1.3601036269430051	50	0	unmethylated (<10%)	A4D9B0	Hercynylcysteine sulfoxide lyase (EC 4.4.1.-)	selenoneine biosynthetic process [GO:1903257]	hit with GO BP
GN009924	Chromosome_4A	813	1	41	44.03444034440344	1.0406156343656343	0.35739814152966404	41	0	0.35739814152966404	41	0	NA	NA	NA	5.561535701471116	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009925	Chromosome_4A	7982	5	158	35.04134302179905	0.645773039622313	1.4335664335664335	140	0	0.18066847335140018	30	0	1.6191623176769705	110	0	0.7148530579825259	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009926	Chromosome_4A	1437	1	57	45.093945720250524	0.7826797385620915	0.48496605237633367	50	0	0.48496605237633367	50	0	NA	NA	NA	0.1757469244288225	43	0	unmethylated (<10%)	O35015	Glycosyl hydrolase YngK (EC 3.2.1.-)	NA	hit, no GO BP
GN009927	Chromosome_4A	2301	1	95	45.980008691873095	0.8049602297834733	0.6444053895723492	85	0	0.6444053895723492	85	0	NA	NA	NA	0.4336224149432955	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009928	Chromosome_4A	429	1	14	46.15384615384615	0.6133578431372549	NA	0	NA	NA	NA	NA	NA	NA	NA	0.31446540880503143	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009929	Chromosome_4A	895	2	33	39.10614525139665	0.9759119746233148	0.4056795131845842	33	0	0.5159958720330238	26	0	0.19607843137254902	7	0	0.5102040816326531	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009930	Chromosome_4A	9598	6	284	38.62262971452386	0.7971527668111339	1.0782147591692444	272	0	1.0899182561307903	177	0	1.0532150776053215	95	0	0.6433823529411765	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009931	Chromosome_4A	672	1	22	51.339285714285715	0.499054820415879	1.0075566750629723	22	0	1.0075566750629723	22	0	NA	NA	NA	1.4220877458396368	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009932	Chromosome_4A	25247	30	434	36.14686893492296	0.5266040539657274	90.51412829008599	433	0.9907621247113164	91.37365213314581	127	0.984251968503937	90.24533281204184	306	0.9934640522875817	4.357625845229151	30	0.1	methylated (>=50%)	G5E8P0	Gamma-tubulin complex component 6 (GCP-6)	meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; spindle assembly [GO:0051225]	hit with GO BP
GN009933	Chromosome_4A	10518	9	322	36.96520250998289	0.897379636707608	1.0376231710958495	321	0	2.113770593720858	64	0	0.6975144906179389	257	0	0.6839945280437757	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009934	Chromosome_4A	300	1	7	46.666666666666664	0.6363636363636364	0	7	0	0	7	0	NA	NA	NA	0.49889135254988914	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009935	Chromosome_4A	19314	10	396	36.79196437817127	0.6061439211642575	87.84907183212268	385	0.9584415584415584	95.31428571428572	17	1	87.57582095795858	368	0.9565217391304348	0.853398354160317	48	0	methylated (>=50%)	Q28F07	Protein arginine N-methyltransferase 1 (EC 2.1.1.319) (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 2) (Histone-arginine N-methyltransferase PRMT1)	cardiac muscle tissue development [GO:0048738]; cellular response to methionine [GO:0061431]; metamorphosis [GO:0007552]; negative regulation of megakaryocyte differentiation [GO:0045653]; neurogenesis [GO:0022008]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of TORC1 signaling [GO:1904263]; regulation of megakaryocyte differentiation [GO:0045652]; RNA splicing [GO:0008380]	hit with GO BP
GN009936	Chromosome_4A	2316	2	40	38.6873920552677	0.4639423076923077	93.34763948497854	40	1	89.26829268292683	21	1	96.55172413793103	19	1	8.852459016393443	33	0.21212121212121213	methylated (>=50%)	A2XYY8	Probable protein arginine N-methyltransferase 6.1 (EC 2.1.1.-)	NA	hit, no GO BP
GN009937	Chromosome_4A	300	1	10	54.333333333333336	0.45248868778280543	84.01360544217687	10	1	84.01360544217687	10	1	NA	NA	NA	85.79117330462863	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009938	Chromosome_4A	59767	20	914	34.89049140830224	0.5029929195050753	70.60185617448788	819	0.7802197802197802	78.99029982363315	54	0.8703703703703703	69.82556360297868	765	0.7738562091503268	45.63037249283668	19	0.5789473684210527	methylated (>=50%)	Q7ZU90	ATP-dependent chromatin remodeler CHD1l (EC 3.6.4.-) (Chromo domain-containing protein 1-like)	brain development [GO:0007420]; chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]	hit with GO BP
GN009939	Chromosome_4A	50219	28	664	34.21015950138394	0.45226376518362216	76.78936238844486	463	0.8401727861771058	91.64198749588681	56	1	74.97385568337222	407	0.8181818181818182	68.29868708971554	51	0.7450980392156863	methylated (>=50%)	Q96JG6	Syndetin (Coiled-coil domain-containing protein 132) (EARP/GARPII complex subunit VPS50)	endocytic recycling [GO:0032456]	hit with GO BP
GN009940	Chromosome_4A	6347	10	80	37.2459429651804	0.3669666422870226	85.08793061912792	77	0.948051948051948	91.39240506329114	31	1	81.21353558926488	46	0.9130434782608695	3.672727272727273	45	0.022222222222222223	methylated (>=50%)	Q8NCJ5	SPRY domain-containing protein 3	NA	hit, no GO BP
GN009941	Chromosome_4A	4123	3	129	36.76934271161775	0.9272388742736701	1.5717398070339246	129	0	0.12091898428053205	34	0	2.074601844090528	95	0	6.221484861053505	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009942	Chromosome_4A	8944	3	250	33.340787119856884	1.0066100426008535	1.194551678927817	250	0	0.22271714922049	26	0	1.300274592149895	224	0	0.13345195729537365	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009943	Chromosome_4A	1194	2	11	36.01340033500838	0.28552173913043477	91.5351506456241	11	1	91.5351506456241	11	1	NA	NA	NA	62.53776435045317	31	0.7419354838709677	methylated (>=50%)	Q400C8	Archaemetzincin-2 (EC 3.4.-.-) (Archeobacterial metalloproteinase-like protein 2)	proteolysis [GO:0006508]	hit with GO BP
GN009944	Chromosome_4A	23532	8	530	37.7188509263981	0.6344030577186046	72.4989741485433	285	0.8280701754385965	83.8562464346834	37	0.8648648648648649	70.59049079754601	248	0.8225806451612904	51.58730158730159	17	0.6470588235294118	methylated (>=50%)	Q6ZMV9	Kinesin-like protein KIF6	microtubule-based movement [GO:0007018]	hit with GO BP
GN009945	Chromosome_4A	24091	21	240	34.921755012245235	0.33481256405306054	78.95080539834566	228	0.8640350877192983	89.21471172962227	35	0.9428571428571428	77.19626168224299	193	0.8497409326424871	40.35874439461883	37	0.4594594594594595	methylated (>=50%)	P56701	26S proteasome non-ATPase regulatory subunit 2 (26S proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor-associated protein 2)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of protein catabolic process [GO:0042176]	hit with GO BP
GN009946	Chromosome_4A	25249	21	270	32.62307418115569	0.4048768644523692	76.34136326307144	242	0.9256198347107438	84.30656934306569	76	0.9736842105263158	73.50593912397922	166	0.9036144578313253	77.9324055666004	10	1	methylated (>=50%)	Q99PW8	Kinesin-like protein KIF17 (MmKIF17)	anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; intraciliary transport [GO:0042073]; microtubule-based process [GO:0007017]; protein-containing complex localization [GO:0031503]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN009947	Chromosome_4A	13696	11	359	36.26606308411215	0.797556493119932	0.7161458333333334	359	0	0.6172839506172839	101	0	0.7367668097281831	258	0	0.8112094395280236	37	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN009948	Chromosome_4A	7809	8	126	34.319375080035854	0.5484581939799331	71.25815890164303	94	0.7659574468085106	55.93385214007782	24	0.4583333333333333	75.87115666178623	70	0.8714285714285714	5.438066465256798	19	0	methylated (>=50%)	O95985	DNA topoisomerase 3-beta-1 (EC 5.6.2.1) (DNA topoisomerase III beta-1)	DNA topological change [GO:0006265]	hit with GO BP
GN009949	Chromosome_4A	968	3	24	41.52892561983471	0.5767626613704071	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6588235294117647	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009950	Chromosome_4A	7899	7	62	35.0044309406254	0.25800180803246875	84.5412130637636	62	0.9193548387096774	87.73903262092239	18	1	83.31900257953568	44	0.8863636363636364	87.2945638432364	46	0.9782608695652174	methylated (>=50%)	O95045	Uridine phosphorylase 2 (UPase 2) (UrdPase 2) (EC 2.4.2.3)	CMP catabolic process [GO:0006248]; dCMP catabolic process [GO:0006249]; dTMP catabolic process [GO:0046074]; dUMP catabolic process [GO:0046079]; nucleoside metabolic process [GO:0009116]; UMP catabolic process [GO:0046050]; UMP salvage [GO:0044206]; uridine catabolic process [GO:0006218]; uridine metabolic process [GO:0046108]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN009951	Chromosome_4A	25055	9	404	35.38615046896827	0.5151169702823866	84.55022869727257	362	0.9558011049723757	88.29694323144105	49	0.9183673469387755	84.14782853390864	313	0.9616613418530351	29.36111111111111	59	0.22033898305084745	methylated (>=50%)	Q7TQK0	Cyclin-T2 (CycT2)	early viral transcription [GO:0019085]; late viral transcription [GO:0019086]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; regulation of muscle cell differentiation [GO:0051147]; skeletal muscle tissue development [GO:0007519]	hit with GO BP
GN009952	Chromosome_4A	19876	8	437	35.78687864761521	0.6874596447072139	88.07579222476315	391	0.9641943734015346	78.32131822863028	39	0.8717948717948718	88.91599396788787	352	0.9744318181818182	91.24559341950646	50	1	methylated (>=50%)	Q9H9L4	KAT8 regulatory NSL complex subunit 2 (NSL complex protein NSL2) (Non-specific lethal 2 homolog)	positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN009953	Chromosome_4A	2052	4	23	37.67056530214425	0.31962616822429907	90.85072231139647	23	1	89.9830220713073	12	1	91.62861491628615	11	1	94.42379182156134	25	1	methylated (>=50%)	Q7T330	Speckle-type POZ protein (HIB homolog 1) (SPOP1)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of proteolysis [GO:0030162]	hit with GO BP
GN009954	Chromosome_4A	5575	5	71	32.84304932735426	0.4740714391794459	90.94326114193665	71	1	96.35343618513323	13	1	90.15182601559295	58	1	25.766103814884303	30	0.23333333333333334	methylated (>=50%)	Q9VFP2	Protein roadkill (Hh-induced MATH and BTB domain-containing protein)	compound eye morphogenesis [GO:0001745]; eye development [GO:0001654]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of smoothened signaling pathway [GO:0045879]; positive regulation of apoptotic process [GO:0043065]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein catabolic process [GO:0045732]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein destabilization [GO:0031648]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; regulation of proteolysis [GO:0030162]; segment polarity determination [GO:0007367]	hit with GO BP
GN009955	Chromosome_4A	717	1	28	39.8884239888424	0.9825282631038027	0.5181347150259067	28	0	0.5181347150259067	28	0	NA	NA	NA	0.6247396917950854	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009956	Chromosome_4A	19270	9	236	34.21899325376233	0.4184949725518308	77.48449093784211	235	0.9106382978723404	79.56487956487956	22	0.8636363636363636	77.30781920158364	213	0.9154929577464789	0.9136212624584718	45	0	methylated (>=50%)	Q8AVX5	Protein XRP2	post-Golgi vesicle-mediated transport [GO:0006892]	hit with GO BP
GN009957	Chromosome_4A	1719	1	56	42.524723676556135	0.7246939789511722	46.271393643031786	56	0.375	46.271393643031786	56	0.375	NA	NA	NA	0.5084745762711864	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009958	Chromosome_4A	49508	30	594	34.493415205623336	0.40385568980721054	84.41237951457438	547	0.9341864716636198	94.42628903413217	113	1	82.50622062482721	434	0.9170506912442397	91.7728852838934	16	1	methylated (>=50%)	Q7Z4S6	Kinesin-like protein KIF21A (Kinesin-like protein KIF2) (Renal carcinoma antigen NY-REN-62)	anterograde axonal transport [GO:0008089]; cortical microtubule organization [GO:0043622]; establishment or maintenance of cell polarity [GO:0007163]; regulation of axon guidance [GO:1902667]; regulation of microtubule depolymerization [GO:0031114]; regulation of microtubule polymerization [GO:0031113]	hit with GO BP
GN009959	Chromosome_4A	390	1	9	51.794871794871796	0.4968152866242038	89.2116182572614	9	1	89.2116182572614	9	1	NA	NA	NA	89.79591836734694	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009960	Chromosome_4A	15747	22	393	35.809995554708834	0.7785012340647148	21.49541917052507	385	0.18181818181818182	23.92166006062019	90	0.2222222222222222	20.845562980078686	295	0.1694915254237288	1.8153727307840866	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN009961	Chromosome_4A	9489	9	123	35.17757403309095	0.421400628591338	74.20378124603477	123	0.8211382113821138	80.99945085118067	29	0.9310344827586207	72.16171617161716	94	0.7872340425531915	21.449792038027333	57	0.19298245614035087	methylated (>=50%)	Q80YV2	Zinc finger C3HC-type protein 1 (Nuclear-interacting partner of ALK) (mNIPA) (Nuclear-interacting partner of anaplastic lymphoma kinase)	NA	hit, no GO BP
GN009962	Chromosome_4A	7221	6	85	35.0505470156488	0.3856911253683886	45.12516469038208	85	0.49411764705882355	62.358845671267254	22	0.8181818181818182	41.469257386212405	63	0.38095238095238093	40.33918837068443	25	0.24	sparse (10-50%)	Q5ZEQ8	Four-jointed box protein 1 (Four-jointed protein homolog)	cell-cell signaling [GO:0007267]	hit with GO BP
GN009963	Chromosome_4A	877	2	26	41.04903078677309	0.7051583374567046	0.6622516556291391	26	0	0.7722007722007722	23	0	0	3	0	24.13657770800628	60	0.15	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN009964	Chromosome_4A	378	1	15	46.560846560846564	0.7399190917395276	88.2262996941896	15	1	88.2262996941896	15	1	NA	NA	NA	75.83141257820218	46	0.9347826086956522	methylated (>=50%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN009965	Chromosome_4A	21736	20	331	37.407986750092014	0.4357822554531414	89.05544971422842	319	0.9247648902821317	92.79731993299832	23	0.9565217391304348	88.8171928327645	296	0.9222972972972973	17.68920734437976	49	0.1836734693877551	methylated (>=50%)	Q3SZI6	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit) (Ribophorin II) (RPN-II) (Ribophorin-2)	protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN009966	Chromosome_4A	2995	4	58	35.32554257095158	0.6213137328540516	76.38238050609185	58	0.8448275862068966	70.79439252336448	11	0.8181818181818182	77.78429073856975	47	0.851063829787234	12.788906009244993	24	0.125	methylated (>=50%)	Q9VRV7	Splicing factor 3B subunit 6 (Pre-mRNA branch site p14-like protein)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN009967	Chromosome_4A	4518	3	107	42.18680832226649	0.5384532275939653	90.1986183074266	105	1	93.27086882453152	19	1	89.15558126084441	86	1	92.45752175714878	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009968	Chromosome_4A	2257	3	30	38.63535666814355	0.35625591918341576	89.48529411764706	30	0.9666666666666667	94.20423183072677	25	1	70.6959706959707	5	0.8	65.8438576349024	40	0.675	methylated (>=50%)	F1MBP6	Kelch-like protein 3	distal tubule morphogenesis [GO:0072156]; monoatomic ion homeostasis [GO:0050801]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; renal sodium ion absorption [GO:0070294]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN009969	Chromosome_4A	30030	22	356	34.35231435231435	0.401952651259938	61.784709792891846	330	0.7090909090909091	78.55717137154262	72	0.9305555555555556	58.119391824526424	258	0.6472868217054264	0.6957621758380772	39	0	methylated (>=50%)	Q3ZAV0	Coiled-coil domain-containing protein 60	NA	hit, no GO BP
GN009970	Chromosome_4A	5546	6	57	35.19653804543815	0.33187720663036324	89.46853602869254	57	0.9649122807017544	95.42961608775137	10	1	88.17460317460318	47	0.9574468085106383	78.4591732148958	72	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN009971	Chromosome_4A	783	1	18	40.229885057471265	0.6127826086956522	1.8561484918793503	18	0	1.8561484918793503	18	0	NA	NA	NA	2.792181890706023	38	0	unmethylated (<10%)	Q6DF57	G patch domain-containing protein 11 (Coiled-coil domain-containing protein 75)	NA	hit, no GO BP
GN009972	Chromosome_4A	309	1	6	41.10032362459547	0.4600496277915633	0.5181347150259067	6	0	0.5181347150259067	6	0	NA	NA	NA	0.6528835690968444	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009973	Chromosome_4A	5024	6	169	37.97770700636943	0.9329106761233471	0.746474979264584	169	0	0.4412763068567549	72	0	0.9561567164179104	97	0	0.3032600454890068	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009974	Chromosome_4A	1621	5	28	31.832202344231955	0.6827008408164493	0.5903187721369539	28	0	0.6666666666666666	19	0	0.4658385093167702	9	0	0.3808487486398259	32	0	unmethylated (<10%)	Q91ZW9	CD209 antigen-like protein C (DC-SIGN-related protein 2) (DC-SIGNR2) (CD antigen CD209)	B cell adhesion [GO:0097323]; dendritic cell migration [GO:0036336]; immature T cell proliferation [GO:0033079]; immune response [GO:0006955]; leukocyte cell-cell adhesion [GO:0007159]; positive regulation of T cell proliferation [GO:0042102]; positive regulation of viral life cycle [GO:1903902]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN009975	Chromosome_4A	345	1	6	37.971014492753625	0.4831932773109244	0.5154639175257731	6	0	0.5154639175257731	6	0	NA	NA	NA	1.0071942446043165	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009976	Chromosome_4A	414	1	13	42.270531400966185	0.706855791962175	1.2594458438287153	13	0	1.2594458438287153	13	0	NA	NA	NA	0.7801743919229004	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009977	Chromosome_4A	1596	1	68	43.233082706766915	0.9192302480010841	0.6529850746268657	68	0	0.6529850746268657	68	0	NA	NA	NA	38.159111933395	36	0.4166666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009978	Chromosome_4A	351	1	23	51.851851851851855	0.9824753559693319	1.1406844106463878	23	0	1.1406844106463878	23	0	NA	NA	NA	0.9326845093268451	52	0	unmethylated (<10%)	Q23551	Twitchin (EC 2.7.11.1) (Uncoordinated protein 22)	adult locomotory behavior [GO:0008344]; negative regulation of cell division [GO:0051782]; positive regulation of locomotion [GO:0040017]; positive regulation of sarcomere organization [GO:0060298]; positive regulation of striated muscle contraction [GO:0045989]; sarcomere organization [GO:0045214]	hit with GO BP
GN009979	Chromosome_4A	14905	10	389	36.283126467628314	0.7929918826326415	1.9078641228478361	338	0	0.80393032603841	70	0	2.052391533154017	268	0	0.804093567251462	54	0	unmethylated (<10%)	O89110	Caspase-8 (CASP-8) (EC 3.4.22.61) [Cleaved into: Caspase-8 subunit p18; Caspase-8 subunit p10]	angiogenesis [GO:0001525]; apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cardiac muscle tissue development [GO:0048738]; cellular response to mechanical stimulus [GO:0071260]; execution phase of apoptosis [GO:0097194]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; heart development [GO:0007507]; hepatocyte apoptotic process [GO:0097284]; macrophage differentiation [GO:0030225]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of necroptotic process [GO:0060546]; neural tube formation [GO:0001841]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cell migration [GO:0030335]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of macrophage differentiation [GO:0045651]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of proteolysis [GO:0045862]; positive regulation of pyroptotic inflammatory response [GO:0140639]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of apoptotic signaling pathway [GO:2001233]; regulation of cytokine production [GO:0001817]; regulation of innate immune response [GO:0045088]; regulation of thymocyte apoptotic process [GO:0070243]; response to ethanol [GO:0045471]; response to tumor necrosis factor [GO:0034612]; self proteolysis [GO:0097264]; TRAIL-activated apoptotic signaling pathway [GO:0036462]	hit with GO BP
GN009980	Chromosome_4A	336	1	19	50.595238095238095	1.6056338028169015	0.2915451895043732	19	0	0.2915451895043732	19	0	NA	NA	NA	0.5523166615526235	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009981	Chromosome_4A	768	1	22	49.348958333333336	0.7265846736045412	0.5805515239477503	22	0	0.5805515239477503	22	0	NA	NA	NA	1.9768234492160872	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009982	Chromosome_4A	576	1	15	50.34722222222222	0.604153555695406	0.9009009009009009	15	0	0.9009009009009009	15	0	NA	NA	NA	0	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009983	Chromosome_4A	426	1	15	49.06103286384977	0.8392434988179669	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009984	Chromosome_4A	489	1	13	48.057259713701434	0.6974983541803819	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN009985	Chromosome_4A	426	1	15	49.06103286384977	0.8392434988179669	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9448818897637795	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009986	Chromosome_4A	402	1	11	49.50248756218905	0.6592128801431127	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1668611435239207	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN009987	Chromosome_4A	1842	1	59	49.7828447339848	0.7748214056551311	1.243781094527363	43	0	1.243781094527363	43	0	NA	NA	NA	0.6595218466611706	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009988	Chromosome_4A	666	1	20	50.150150150150154	0.6793145654834761	0.4158004158004158	20	0	0.4158004158004158	20	0	NA	NA	NA	1.2626262626262625	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009989	Chromosome_4A	1335	1	42	50.78651685393258	0.7366775278536893	1.4880952380952381	42	0	1.4880952380952381	42	0	NA	NA	NA	0.7299270072992701	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009990	Chromosome_4A	411	1	16	51.09489051094891	0.8856565656565657	0.5063291139240507	16	0	0.5063291139240507	16	0	NA	NA	NA	0.5460218408736349	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009991	Chromosome_4A	3015	1	110	50.01658374792703	0.8368850163137694	0.45203415369161226	98	0	0.45203415369161226	98	0	NA	NA	NA	0.9018036072144289	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009992	Chromosome_4A	498	1	17	49.799196787148595	0.8191582002902758	2.112676056338028	8	0	2.112676056338028	8	0	NA	NA	NA	0.8797653958944281	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009993	Chromosome_4A	2043	1	65	50.122369065100344	0.7507632293080054	1.2104283054003724	55	0	1.2104283054003724	55	0	NA	NA	NA	0.6647673314339981	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009994	Chromosome_4A	2472	1	90	51.213592233009706	0.8017644006227296	0.532319391634981	72	0	0.532319391634981	72	0	NA	NA	NA	0.8738394320043692	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009995	Chromosome_4A	1326	1	55	41.4027149321267	0.9679602888086642	0.539568345323741	55	0	0.539568345323741	55	0	NA	NA	NA	0.5961251862891207	51	0	unmethylated (<10%)	Q56H79	Neuropeptide S receptor (G protein-coupled receptor 154)	neuropeptide signaling pathway [GO:0007218]; positive regulation of cAMP/PKA signal transduction [GO:0141163]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of release of sequestered calcium ion into cytosol [GO:0051281]	hit with GO BP
GN009996	Chromosome_4A	14789	3	397	34.005003718980326	0.9285973217095888	0.5637428977272727	388	0	0.6773101112723754	43	0	0.5522701725233371	345	0	0.518754988028731	36	0	unmethylated (<10%)	P50219	Motor neuron and pancreas homeobox protein 1 (Homeobox protein HB9)	central nervous system development [GO:0007417]; endocrine pancreas development [GO:0031018]; neuron projection morphogenesis [GO:0048812]; spinal cord motor neuron cell fate specification [GO:0021520]	hit with GO BP
GN009997	Chromosome_4A	14521	5	263	36.16142138971145	0.5545980241384468	85.06413635564927	202	0.8712871287128713	68.04860614724804	30	0.6666666666666666	87.44866272663528	172	0.9069767441860465	21.107847251363825	31	0.2903225806451613	methylated (>=50%)	Q8JHJ2	ATP-dependent RNA helicase DDX55 (EC 3.6.4.13) (DEAD box protein 55)	NA	hit, no GO BP
GN009998	Chromosome_4A	615	1	23	43.08943089430894	0.8062585499316005	0.4784688995215311	23	0	0.4784688995215311	23	0	NA	NA	NA	0.29739776951672864	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN009999	Chromosome_4A	423	1	19	44.917257683215134	0.8953877005347594	0.6564551422319475	19	0	0.6564551422319475	19	0	NA	NA	NA	0.650142218610321	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010000	Chromosome_4A	1011	1	26	39.861523244312565	0.6517728737912224	0.7412398921832885	26	0	0.7412398921832885	26	0	NA	NA	NA	2.47599797877716	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010001	Chromosome_4A	10794	6	142	32.51806559199555	0.5018650314462114	82.92658631337783	142	0.9154929577464789	62.63297872340426	11	0.7272727272727273	84.56982879293636	131	0.9312977099236641	56.813819577735124	37	0.7027027027027027	methylated (>=50%)	O14095	Thioredoxin domain-containing protein plp1 (Phosducin-like protein 1)	protein folding [GO:0006457]	hit with GO BP
GN010002	Chromosome_4A	33484	27	543	34.80468283359216	0.5376879946059122	89.21199889918356	462	0.9891774891774892	94.33826181031374	53	1	88.7370531239559	409	0.9877750611246944	92.19190968955786	16	0.875	methylated (>=50%)	O95373	Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)	negative regulation of cell cycle [GO:0045786]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of odontoblast differentiation [GO:1901331]; positive regulation of protein localization to nucleus [GO:1900182]; protein import into nucleus [GO:0006606]	hit with GO BP
GN010003	Chromosome_4A	489	1	22	46.012269938650306	0.8763440860215054	98.42105263157895	11	1	98.42105263157895	11	1	NA	NA	NA	87.40204942736588	37	0.972972972972973	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010004	Chromosome_4A	2004	2	27	33.483033932135726	0.4818680535765175	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010005	Chromosome_4A	1283	2	10	37.178487918939986	0.22556258790436007	NA	0	NA	NA	NA	NA	NA	NA	NA	4.218852999340804	65	0	NA	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN010006	Chromosome_4A	294	1	7	41.156462585034014	0.5873287671232876	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	D2YVH7	C-type lectin mannose-binding isoform (CTL) (Venom C-type lectin mannose-binding isoform 1)	NA	hit, no GO BP
GN010007	Chromosome_4A	1812	5	36	32.22958057395144	0.7698353690918747	0.5668934240362812	32	0	0.7614213197969543	16	0	0.4098360655737705	16	0	0.5206738131699847	36	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN010008	Chromosome_4A	52666	22	576	35.55994379675692	0.3464556321320972	68.9073305670816	568	0.7922535211267606	85.53119730185497	56	0.9642857142857143	67.42202802470996	512	0.7734375	86.52988403211418	20	0.95	methylated (>=50%)	O75096	Low-density lipoprotein receptor-related protein 4 (LRP-4) (Multiple epidermal growth factor-like domains 7)	amyloid-beta clearance by cellular catabolic process [GO:0150094]; dendrite morphogenesis [GO:0048813]; enzyme-linked receptor protein signaling pathway [GO:0007167]; generation of neurons [GO:0048699]; kidney development [GO:0001822]; limb development [GO:0060173]; negative regulation of axonogenesis [GO:0050771]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of ossification [GO:0030279]; positive regulation of presynaptic membrane organization [GO:1901631]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of skeletal muscle acetylcholine-gated channel clustering [GO:1904395]; postsynaptic membrane assembly [GO:0097104]; presynaptic membrane assembly [GO:0097105]; regulation of postsynapse assembly [GO:0150052]; skeletal muscle acetylcholine-gated channel clustering [GO:0071340]; synapse organization [GO:0050808]; synaptic assembly at neuromuscular junction [GO:0051124]	hit with GO BP
GN010009	Chromosome_4A	4424	8	130	39.10488245931284	0.7686622320768662	0.6705783738474435	128	0	0.7926361544362056	103	0	0.43816942551119764	25	0	0.5152224824355972	36	0	unmethylated (<10%)	H2A0L6	Putative beta-hexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Chitobiase) (N-acetyl-beta-glucosaminidase)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]; glycosaminoglycan metabolic process [GO:0030203]	hit with GO BP
GN010010	Chromosome_4A	6620	3	164	37.220543806646525	0.7161595672751859	94.6403133903134	163	1	95.6386292834891	10	1	94.57979225684608	153	1	37.11758201253225	42	0.30952380952380953	methylated (>=50%)	Q3SZQ6	Large ribosomal subunit protein eL32 (60S ribosomal protein L32)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN010011	Chromosome_4A	33127	11	497	35.11938901802155	0.4870517615665748	87.23263688165827	497	0.9818913480885312	75.70680628272251	15	0.8666666666666667	87.54381997059821	482	0.9854771784232366	34.08262454434994	28	0.35714285714285715	methylated (>=50%)	Q3ZBT5	Syntaxin-7	intracellular protein transport [GO:0006886]; positive regulation of receptor localization to synapse [GO:1902685]; positive regulation of T cell mediated cytotoxicity [GO:0001916]; regulation of protein localization to plasma membrane [GO:1903076]; vesicle docking [GO:0048278]	hit with GO BP
GN010012	Chromosome_4A	1740	3	7	36.666666666666664	0.11970280682443589	84.24821002386635	7	1	91.2	5	1	73.96449704142012	2	1	88.94927536231884	24	1	methylated (>=50%)	P0C0T0	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Estrogen-enhanced transcript protein 1) (Eet-1)	cellular response to lipopolysaccharide [GO:0071222]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cytokine production [GO:0001817]; response to lipopolysaccharide [GO:0032496]	hit with GO BP
GN010013	Chromosome_4A	2762	5	56	35.01086169442433	0.6654276372397178	0.8467153284671532	56	0	0.75642965204236	23	0	0.9034712315739419	33	0	0.9459459459459459	28	0	unmethylated (<10%)	O73888	Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase)	glutathione metabolic process [GO:0006749]; prostaglandin metabolic process [GO:0006693]	hit with GO BP
GN010014	Chromosome_4A	12857	11	166	34.60371781908688	0.43265867947860287	89.08318760929303	165	0.9939393939393939	91.4651493598862	36	0.9722222222222222	88.57575757575758	129	1	88.78725287695485	54	1	methylated (>=50%)	Q571C7	Transcription factor TFIIIB component B'' homolog (Transcription factor IIIB 150) (TFIIIB150) (Transcription factor-like nuclear regulator)	positive regulation of transcription by RNA polymerase III [GO:0045945]; regulation of DNA-templated transcription [GO:0006355]; RNA polymerase III preinitiation complex assembly [GO:0070898]	hit with GO BP
GN010015	Chromosome_4A	15810	8	356	36.173308032890574	0.6886774860915134	5.6969576456552	352	0	5.872756933115824	26	0	5.685547908946533	326	0	2.2489705416534687	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010016	Chromosome_4A	12474	11	121	34.20715087381754	0.3361910667653843	84.85861540604542	110	0.9	82.79792746113989	30	0.8666666666666667	85.61630786816536	80	0.9125	59.06886517943744	29	0.6551724137931034	methylated (>=50%)	C0HKD8	Microfibrillar-associated protein 1A (Spliceosome B complex protein MFAP1A)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN010017	Chromosome_4A	5681	5	82	36.34923428973772	0.43746537122980733	64.54891994917408	82	0.6951219512195121	80.98495212038304	35	0.8857142857142857	54.83218762636474	47	0.5531914893617021	7.128514056224899	26	0.038461538461538464	methylated (>=50%)	Q6DFF6	Kelch-like protein 20	Golgi to endosome transport [GO:0006895]; negative regulation of apoptotic process [GO:0043066]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K33-linked ubiquitination [GO:1990390]; protein ubiquitination [GO:0016567]	hit with GO BP
GN010018	Chromosome_4A	37972	21	542	35.1996207732013	0.46466644426185655	87.97873224225306	537	0.9553072625698324	81.3215859030837	38	0.9210526315789473	88.42528294081144	499	0.9579158316633266	63.17356356058351	54	0.6666666666666666	methylated (>=50%)	Q96RT8	Gamma-tubulin complex component 5 (GCP-5)	meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; spindle assembly [GO:0051225]	hit with GO BP
GN010019	Chromosome_4A	8962	9	95	35.97411292122294	0.3276866948940856	75.82396646980378	94	0.8723404255319149	77.90697674418605	23	0.9130434782608695	75.26022754780925	71	0.8591549295774648	59.0032154340836	21	0.5238095238095238	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010020	Chromosome_4A	549	1	9	50.81967213114754	0.3202618615504278	82.47078464106845	9	1	82.47078464106845	9	1	NA	NA	NA	40.605296343001264	14	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010021	Chromosome_4A	1485	1	27	42.62626262626262	0.40048543689320387	78.1940441882805	27	0.8888888888888888	78.1940441882805	27	0.8888888888888888	NA	NA	NA	46.666666666666664	19	0.5263157894736842	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010022	Chromosome_4A	12286	3	138	34.73058766075208	0.3726581766549588	72.6374156219865	138	0.8405797101449275	55.21023765996344	10	0.5	73.86759581881533	128	0.8671875	44.98044328552803	12	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010023	Chromosome_4A	4585	3	66	35.35441657579062	0.46204937932298107	81.39240506329114	65	0.9846153846153847	83.38485316846986	22	0.9545454545454546	80.42168674698796	43	1	47.03087885985748	12	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010024	Chromosome_4A	6832	3	104	35.94847775175644	0.47175585189906616	69.35050993022007	103	0.8349514563106796	76.85873605947955	19	1	67.56038112120541	84	0.7976190476190477	79.72318339100346	20	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010025	Chromosome_4A	570	1	3	37.36842105263158	0.15494744472635014	34.64912280701754	3	0.6666666666666666	34.64912280701754	3	0.6666666666666666	NA	NA	NA	74.96021220159152	25	0.96	NA	NA	NA	NA	no Swiss-Prot hit
GN010026	Chromosome_4A	1283	2	16	36.86671862821512	0.37133244093918455	86.61417322834646	16	1	88.21007502679528	15	1	68.67469879518072	1	1	72.94469357249626	26	0.8076923076923077	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010027	Chromosome_4A	2924	2	46	37.85909712722298	0.44074816824610386	74.01174168297456	46	0.9347826086956522	81.41025641025641	19	1	68.4894053315106	27	0.8888888888888888	66.64050235478807	20	0.65	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010028	Chromosome_4A	1221	1	24	38.73873873873874	0.5282855597620335	70.13081395348837	24	0.7083333333333334	70.13081395348837	24	0.7083333333333334	NA	NA	NA	50.39761431411531	11	0.45454545454545453	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010029	Chromosome_4A	1551	1	13	38.87814313346228	0.2220301281768929	65.9270998415214	13	0.9230769230769231	65.9270998415214	13	0.9230769230769231	NA	NA	NA	46.01156069364162	15	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010030	Chromosome_4A	1575	1	29	39.80952380952381	0.46653796653796653	81.18876551273678	29	0.9655172413793104	81.18876551273678	29	0.9655172413793104	NA	NA	NA	58.84450784593438	17	0.6470588235294118	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010031	Chromosome_4A	1293	2	26	38.36040216550657	0.5478813559322034	74.3342776203966	26	0.9615384615384616	75.10398098633392	25	0.96	58.53658536585366	1	1	56.51162790697674	12	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010032	Chromosome_4A	1125	2	20	39.022222222222226	0.4669987546699875	77.81402936378467	20	0.85	77.81402936378467	20	0.85	NA	NA	NA	76.38062871707731	33	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010033	Chromosome_4A	1296	2	24	36.574074074074076	0.556621331424481	81.53942428035043	24	1	82.23552894211576	23	1	70.52631578947368	1	1	45.88607594936709	14	0.42857142857142855	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010034	Chromosome_4A	3553	6	51	35.94145792288207	0.4467397414277684	80.9119830328738	51	0.9411764705882353	78.74564459930313	8	0.875	81.46341463414635	43	0.9534883720930233	23.581560283687942	28	0.17857142857142858	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010035	Chromosome_4A	8417	10	86	34.02637519306166	0.36038153957061614	77.92672028596962	84	0.8690476190476191	66.16161616161617	21	0.6666666666666666	81.80090282727488	63	0.9365079365079365	32.912234042553195	29	0.3793103448275862	methylated (>=50%)	Q9DBU3	Serine/threonine-protein kinase RIO3 (EC 2.7.11.1) (RIO kinase 3)	cellular response to dsDNA [GO:1990786]; cellular response to dsRNA [GO:0071359]; cellular response to virus [GO:0098586]; maturation of SSU-rRNA [GO:0030490]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of MDA-5 signaling pathway [GO:0039534]; negative regulation of protein-containing complex assembly [GO:0031333]; nonfunctional rRNA decay [GO:0070651]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN010036	Chromosome_4A	11338	8	202	35.64120656200388	0.5612461397535422	86.07145498927436	202	0.995049504950495	94.43938012762078	19	1	85.3324746417646	183	0.994535519125683	17.15616045845272	38	0.15789473684210525	methylated (>=50%)	A1E295	Cathepsin B (EC 3.4.22.1) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]	proteolysis [GO:0006508]	hit with GO BP
GN006196	Chromosome_4A	714	3	3	36.27450980392157	0.12857142857142856	2.0408163265306123	3	0	2.0408163265306123	3	0	NA	NA	NA	7.856712823600241	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010037	Chromosome_4A	477	1	23	46.540880503144656	0.8977170444317158	0.8849557522123894	23	0	0.8849557522123894	23	0	NA	NA	NA	1.6690510252742012	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010038	Chromosome_4A	11998	5	331	36.989498249708284	0.8080455852745158	0.8528921380017955	330	0	0.8641975308641975	20	0	0.8522727272727273	310	0	0.45694200351493847	47	0	unmethylated (<10%)	A0T2M3	Polcalcin Cup a 4 (Calcium-binding pollen allergen Cup a 4) (allergen Cup a 4)	NA	hit, no GO BP
GN010039	Chromosome_4A	741	1	19	48.178137651821864	0.4437125748502994	1.8140589569160999	19	0	1.8140589569160999	19	0	NA	NA	NA	1.0005885815185402	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010040	Chromosome_4A	23493	10	601	34.844421742646745	0.8428677372219897	0.5909510618651893	595	0	0.7522986904430203	71	0	0.5709145012283312	524	0	0.6242197253433208	48	0	unmethylated (<10%)	P50549	ETS translocation variant 1 (Ets-related protein 81)	cell differentiation [GO:0030154]; peripheral nervous system neuron development [GO:0048935]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN010041	Chromosome_4A	315	1	17	55.23809523809524	0.7291666666666666	86.95652173913044	17	1	86.95652173913044	17	1	NA	NA	NA	66.86626746506985	59	0.8135593220338984	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010042	Chromosome_4A	411	1	14	40.87591240875913	0.8387755102040816	0.5274261603375527	14	0	0.5274261603375527	14	0	NA	NA	NA	0.47619047619047616	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010043	Chromosome_4A	10919	3	283	36.43190768385383	0.7812773693099647	0.8871989860583016	245	0	0.39904229848363926	29	0	0.9496579189216787	216	0	0.8029441284710606	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010044	Chromosome_4A	1047	1	41	42.311365807067816	0.8782119476268413	0.3427592116538132	41	0	0.3427592116538132	41	0	NA	NA	NA	0.47633224173861266	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010045	Chromosome_4A	312	1	17	57.69230769230769	0.6735238095238095	2.0408163265306123	17	0	2.0408163265306123	17	0	NA	NA	NA	0.42803638309256287	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010046	Chromosome_4A	1759	3	62	43.60432063672541	0.7766004415011037	0.8184882041405874	49	0	0.7173601147776184	22	0	0.8695652173913043	27	0	0.5499541704857929	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010047	Chromosome_4A	762	1	38	43.963254593175854	1.0448148949989176	0.7541478129713424	32	0	0.7541478129713424	32	0	NA	NA	NA	0.6313574184496668	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010048	Chromosome_4A	6406	11	203	37.8707461754605	0.8852011313318335	1.165450386668119	203	0	1.1505507955936352	97	0	1.1773940345368916	106	0	2.2712090848363395	42	0	unmethylated (<10%)	P18173	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	glucose metabolic process [GO:0006006]; pupal chitin-based cuticle development [GO:0008364]; sperm storage [GO:0046693]	hit with GO BP
GN010049	Chromosome_4A	4154	5	120	33.72652864708714	1.016418312168147	0.5706134094151213	118	0	0.7931665649786455	32	0	0.5167577144544515	86	0	3.736991485335856	40	0	unmethylated (<10%)	Q7YT83	Cysteine-rich venom protein (CRVP) (EC 3.4.-.-) (Substrate-specific endoprotease Tex31)	NA	hit, no GO BP
GN010050	Chromosome_4A	6811	6	87	34.70855968286595	0.42463719406668704	79.8475867908552	86	0.8372093023255814	94.33465085638998	13	1	77.71084337349397	73	0.8082191780821918	0.5922693266832918	61	0	methylated (>=50%)	O02703	Apoptosis regulator BAX	apoptotic mitochondrial changes [GO:0008637]; apoptotic signaling pathway [GO:0097190]; B cell apoptotic process [GO:0001783]; establishment or maintenance of transmembrane electrochemical gradient [GO:0010248]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; mitochondrial fusion [GO:0008053]; negative regulation of apoptotic process [GO:0043066]; negative regulation of mitochondrial membrane potential [GO:0010917]; negative regulation of protein binding [GO:0032091]; positive regulation of apoptotic process [GO:0043065]; positive regulation of intrinsic apoptotic signaling pathway [GO:2001244]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein-containing complex assembly [GO:0031334]; positive regulation of release of cytochrome c from mitochondria [GO:0090200]; regulation of apoptotic process [GO:0042981]; regulation of mitochondrial membrane potential [GO:0051881]; release of cytochrome c from mitochondria [GO:0001836]; release of matrix enzymes from mitochondria [GO:0032976]; response to toxic substance [GO:0009636]	hit with GO BP
GN010051	Chromosome_4A	4205	5	128	38.763376932223544	0.8150446484680813	0.9878285411889222	128	0	1.173512154233026	31	0	0.938337801608579	97	0	1.3385569702905649	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010052	Chromosome_4A	1494	5	47	37.48326639892905	0.8970221898593492	0.5699254712845243	47	0	0.7987220447284346	31	0	0.2915451895043732	16	0	0	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010053	Chromosome_4A	4518	4	126	37.47233289065959	0.7960899479778486	0.43766765494846815	125	0	0.36877688998156116	34	0	0.45821114369501464	91	0	0.6205673758865248	74	0	unmethylated (<10%)	Q9PTU1	Homeobox protein DBX1-A (Developing brain homeobox protein 1-A) (Homeobox protein hlx1)	cell differentiation in spinal cord [GO:0021515]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010054	Chromosome_4A	1506	1	72	42.430278884462155	1.0832367632367632	0.9345794392523364	72	0	0.9345794392523364	72	0	NA	NA	NA	0.512214342001576	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010055	Chromosome_4A	11082	2	366	35.80581122541057	1.0329440958862666	0.628596724214254	357	0	0.6001021450459653	80	0	0.6437186610651849	277	0	0.4976671850699845	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010056	Chromosome_4A	786	1	33	42.87531806615776	0.9332901554404145	4.862023653088042	33	0	4.862023653088042	33	0	NA	NA	NA	4.6683046683046685	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010057	Chromosome_4A	63531	19	1035	34.96560734129795	0.533674631323502	78.36955766960628	937	0.8025613660618997	93.01435406698565	38	0.9736842105263158	77.81820801959866	899	0.7953281423804227	88.84816753926701	24	0.9166666666666666	methylated (>=50%)	Q8NB78	Lysine-specific histone demethylase 2 (EC 1.14.99.66) (Flavin-containing amine oxidase domain-containing protein 1) (Lysine-specific histone demethylase 1B)	genomic imprinting [GO:0071514]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN001232	Chromosome_4A	1285	1	34	44.5136186770428	0.536501504267207	31.419939577039276	21	0.19047619047619047	31.419939577039276	21	0.19047619047619047	NA	NA	NA	58.90473999079614	39	0.6410256410256411	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010058	Chromosome_4A	294	1	11	53.74149659863946	0.5235551238465275	0.6410256410256411	9	0	0.6410256410256411	9	0	NA	NA	NA	0.398406374501992	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010059	Chromosome_4A	31676	14	531	36.01149134991792	0.5172518711373992	75.94239860661857	527	0.7609108159392789	91.57573112178088	100	0.94	73.34421472615162	427	0.7189695550351288	3.9469808541973492	50	0	methylated (>=50%)	Q03172	Zinc finger protein 40 (Alpha A-crystallin-binding protein 1) (Alpha A-CRYBP1) (Alpha A-crystallin-binding protein I) (Transcription factor alphaA-CRYBP1)	BMP signaling pathway [GO:0030509]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010060	Chromosome_4A	312	1	13	40.06410256410256	1.0816	0.5199306759098787	13	0	0.5199306759098787	13	0	NA	NA	NA	0.45287291253891876	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010061	Chromosome_4A	540	1	32	46.666666666666664	1.0953346855983772	0.6150061500615006	32	0	0.6150061500615006	32	0	NA	NA	NA	0.44136191677175285	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010062	Chromosome_4A	216	1	7	41.2037037037037	0.8409343715239155	1.9230769230769231	7	0	1.9230769230769231	7	0	NA	NA	NA	1.7432115320147503	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010063	Chromosome_4A	15279	13	434	36.83487139210681	0.8376712460283453	0.8641837644959858	413	0	0.7140023800079334	68	0	0.8887447291599092	345	0	0.6172839506172839	47	0	unmethylated (<10%)	P48065	Sodium- and chloride-dependent betaine transporter (BGT-1) (Na(+)/Cl(-) betaine/GABA transporter) (Solute carrier family 6 member 12)	amino acid transport [GO:0006865]; gamma-aminobutyric acid reuptake [GO:0051936]; gamma-aminobutyric acid transport [GO:0015812]; glycine betaine transport [GO:0031460]; monocarboxylic acid transport [GO:0015718]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN010064	Chromosome_4A	570	1	22	42.63157894736842	0.853641933287951	0.5610098176718092	21	0	0.5610098176718092	21	0	NA	NA	NA	1.4397905759162304	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010065	Chromosome_4A	498	1	7	44.377510040160644	0.28620689655172415	2.3622047244094486	7	0	2.3622047244094486	7	0	NA	NA	NA	1.519213583556747	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010066	Chromosome_4A	585	1	23	42.05128205128205	0.9027777777777778	0.9472259810554804	23	0	0.9472259810554804	23	0	NA	NA	NA	1.6877637130801688	67	0	unmethylated (<10%)	O13997	Protein IMPACT homolog	cellular response to amino acid starvation [GO:0034198]; GCN2-mediated signaling [GO:0140469]; regulation of cytoplasmic translational initiation in response to stress [GO:1990611]; regulation of translational initiation [GO:0006446]	hit with GO BP
GN005080	Chromosome_4A	705	1	13	52.340425531914896	0.27068934963671804	0	13	0	0	13	0	NA	NA	NA	0.4473363155754372	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010067	Chromosome_4A	306	1	3	37.58169934640523	0.2776769509981851	0.6289308176100629	3	0	0.6289308176100629	3	0	NA	NA	NA	0.6155567991046447	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010068	Chromosome_4A	2616	2	28	39.296636085626915	0.2790240557682418	0.44642857142857145	22	0	0.44642857142857145	22	0	NA	NA	NA	0.7314524555903866	26	0	unmethylated (<10%)	Q9Y4A0	Jerky protein homolog-like (Human homolog of mouse jerky gene protein) (HHMJG)	central nervous system development [GO:0007417]	hit with GO BP
GN010069	Chromosome_4A	519	1	19	42.38921001926782	0.82175	0.8810572687224669	19	0	0.8810572687224669	19	0	NA	NA	NA	0.22490863086870957	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010070	Chromosome_4A	225	1	9	42.22222222222222	0.9146341463414634	0.32786885245901637	9	0	0.32786885245901637	9	0	NA	NA	NA	0.49242424242424243	66	0	unmethylated (<10%)	P20483	M-phase inducer phosphatase (EC 3.1.3.48) (Cdc25-like protein) (Protein string)	centriole replication [GO:0007099]; G2/M transition of mitotic cell cycle [GO:0000086]; gastrulation [GO:0007369]; Golgi organization [GO:0007030]; histoblast morphogenesis [GO:0007488]; negative regulation of cell size [GO:0045792]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of G2/MI transition of meiotic cell cycle [GO:0110032]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of mitotic cell cycle, embryonic [GO:0045977]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN010071	Chromosome_4A	1593	1	44	48.336472065285626	0.47681632653061223	0.3546099290780142	17	0	0.3546099290780142	17	0	NA	NA	NA	0.6072874493927125	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010072	Chromosome_4A	495	2	17	41.41414141414141	0.8009708737864077	0.2839295854628052	17	0	0.2960331557134399	16	0	0	1	0	0.43355733795794493	67	0	unmethylated (<10%)	P20483	M-phase inducer phosphatase (EC 3.1.3.48) (Cdc25-like protein) (Protein string)	centriole replication [GO:0007099]; G2/M transition of mitotic cell cycle [GO:0000086]; gastrulation [GO:0007369]; Golgi organization [GO:0007030]; histoblast morphogenesis [GO:0007488]; negative regulation of cell size [GO:0045792]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of G2/MI transition of meiotic cell cycle [GO:0110032]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of mitotic cell cycle, embryonic [GO:0045977]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN010073	Chromosome_4A	225	1	9	41.77777777777778	0.9375	0	9	0	0	9	0	NA	NA	NA	0.7637231503579952	64	0	unmethylated (<10%)	P20483	M-phase inducer phosphatase (EC 3.1.3.48) (Cdc25-like protein) (Protein string)	centriole replication [GO:0007099]; G2/M transition of mitotic cell cycle [GO:0000086]; gastrulation [GO:0007369]; Golgi organization [GO:0007030]; histoblast morphogenesis [GO:0007488]; negative regulation of cell size [GO:0045792]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of G2/MI transition of meiotic cell cycle [GO:0110032]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of mitotic cell cycle, embryonic [GO:0045977]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN010074	Chromosome_4A	225	1	8	41.77777777777778	0.8333333333333334	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	P20483	M-phase inducer phosphatase (EC 3.1.3.48) (Cdc25-like protein) (Protein string)	centriole replication [GO:0007099]; G2/M transition of mitotic cell cycle [GO:0000086]; gastrulation [GO:0007369]; Golgi organization [GO:0007030]; histoblast morphogenesis [GO:0007488]; negative regulation of cell size [GO:0045792]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of G2/MI transition of meiotic cell cycle [GO:0110032]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of mitotic cell cycle, embryonic [GO:0045977]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN010075	Chromosome_4A	153	1	8	52.287581699346404	0.7891682785299806	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010076	Chromosome_4A	2798	3	17	35.9542530378842	0.19071484990517584	83.40425531914893	17	1	81.18279569892474	14	1	91.83673469387755	3	1	82.70814272644098	25	0.96	methylated (>=50%)	Q8CFX1	GDH/6PGL endoplasmic bifunctional protein [Includes: Hexose-6-phosphate dehydrogenase (Glucose 1-dehydrogenase) (EC 1.1.1.47) (Glucose-6-phosphate dehydrogenase) (EC 1.1.1.363); 6-phosphogluconolactonase (6PGL) (EC 3.1.1.31)]	glucose metabolic process [GO:0006006]; NADP+ metabolic process [GO:0006739]; pentose-phosphate shunt [GO:0006098]; pentose-phosphate shunt, oxidative branch [GO:0009051]; regulation of cortisol biosynthetic process [GO:2000064]; response to alcohol [GO:0097305]; response to nutrient levels [GO:0031667]	hit with GO BP
GN010077	Chromosome_4A	33629	22	386	34.684349817122126	0.3823036852969607	76.68426197458456	384	0.84375	61.033369214208825	65	0.6461538461538462	78.5983851149728	319	0.8840125391849529	70.00562746201463	51	0.6666666666666666	methylated (>=50%)	Q5REB8	Acyl-CoA synthetase short-chain family member 3, mitochondrial (EC 6.2.1.1) (Acetate--CoA ligase 3) (Propionate--CoA ligase) (EC 6.2.1.17)	NA	hit, no GO BP
GN010078	Chromosome_4A	7252	12	58	33.328736900165474	0.29000559856367886	90.06378802747793	58	0.9827586206896551	92.29287090558766	9	1	89.73854371661513	49	0.9795918367346939	76.37931034482759	12	0.8333333333333334	methylated (>=50%)	Q5XH14	V-type proton ATPase subunit C 1 (V-ATPase subunit C 1) (Vacuolar proton pump subunit C 1)	NA	hit, no GO BP
GN010079	Chromosome_4A	3120	3	32	37.66025641025641	0.29132842728169334	81.30841121495327	32	0.96875	84.10462776659959	12	1	79.92007992007991	20	0.95	82.46844319775596	36	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010080	Chromosome_4A	2233	3	64	35.82624272279445	0.8946314102564102	0.8891084218325512	64	0	0.5123825789923142	18	0	1.0423905489923557	46	0	1.0282776349614395	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010081	Chromosome_4A	15331	14	413	37.12738895049247	0.7938631201437546	1.1310942578548213	405	0	0.7512744834987926	83	0	1.2042588381228034	322	0	0.5963029218843172	55	0	unmethylated (<10%)	Q9R0M0	Cadherin EGF LAG seven-pass G-type receptor 2 (Flamingo homolog)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebrospinal fluid secretion [GO:0033326]; cilium assembly [GO:0060271]; cilium movement [GO:0003341]; dendrite morphogenesis [GO:0048813]; homophilic cell-cell adhesion [GO:0007156]; neural plate anterior/posterior regionalization [GO:0021999]; neuron migration [GO:0001764]; regulation of cell-cell adhesion [GO:0022407]; regulation of DNA-templated transcription [GO:0006355]; regulation of protein localization [GO:0032880]; ventricular system development [GO:0021591]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN010082	Chromosome_4A	8125	18	262	38.43692307692308	0.8822583492827131	0.6129233326407646	261	0	0.5689360895126114	180	0	0.666207213416035	81	0	0.4455997029335314	38	0	unmethylated (<10%)	P33450	Cadherin-related tumor suppressor (Protein fat) [Cleaved into: Ft-mito]	axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; equator specification [GO:0045317]; establishment of body hair planar orientation [GO:0048105]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; establishment of tissue polarity [GO:0007164]; establishment or maintenance of polarity of larval imaginal disc epithelium [GO:0016336]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc growth [GO:0007446]; imaginal disc pattern formation [GO:0007447]; imaginal disc-derived wing morphogenesis [GO:0007476]; microtubule cytoskeleton organization involved in establishment of planar polarity [GO:0090176]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of growth [GO:0045926]; negative regulation of imaginal disc growth [GO:0045571]; negative regulation of organ growth [GO:0046621]; positive regulation of apoptotic process [GO:0043065]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]; pupal development [GO:0035209]; regulation of establishment of planar polarity [GO:0090175]; regulation of growth [GO:0040008]; regulation of imaginal disc growth [GO:0045570]; regulation of protein localization [GO:0032880]; regulation of tube length, open tracheal system [GO:0035159]; tissue development [GO:0009888]; wing disc development [GO:0035220]	hit with GO BP
GN010083	Chromosome_4A	1492	4	37	39.41018766756032	0.6388538496256264	11.1328125	19	0	11.973392461197339	17	0	4.918032786885246	2	0	1.9946298427311087	60	0	sparse (10-50%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN010084	Chromosome_4A	246	1	9	43.90243902439025	0.763448275862069	0.6711409395973155	9	0	0.6711409395973155	9	0	NA	NA	NA	0.8964955175224124	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010085	Chromosome_4A	20414	16	361	34.32448319780543	0.6022047392856816	88.5505176722599	361	0.9445983379501385	90.4517453798768	37	0.9459459459459459	88.40841071291536	324	0.9444444444444444	57.05218617771509	29	0.4827586206896552	methylated (>=50%)	Q6PD62	RNA polymerase-associated protein CTR9 homolog (SH2 domain-binding protein 1)	cell surface receptor signaling pathway via JAK-STAT [GO:0007259]; cellular response to lipopolysaccharide [GO:0071222]; chromatin organization [GO:0006325]; endodermal cell fate commitment [GO:0001711]; interleukin-6-mediated signaling pathway [GO:0070102]; negative regulation of myeloid cell differentiation [GO:0045638]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; stem cell population maintenance [GO:0019827]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN010086	Chromosome_4A	1233	1	34	44.52554744525548	0.572798819478603	96.61971830985915	34	1	96.61971830985915	34	1	NA	NA	NA	93.6268829663963	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010087	Chromosome_4A	1350	1	36	42.666666666666664	0.5986696230598669	95.80838323353294	36	1	95.80838323353294	36	1	NA	NA	NA	50.23952095808383	24	0.5416666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010088	Chromosome_4A	38967	20	406	35.070700849436705	0.34223364370926573	80.57245518761994	390	0.9179487179487179	91.48698884758365	48	1	79.22572359066098	342	0.9064327485380117	68.4913217623498	13	0.8461538461538461	methylated (>=50%)	B9EJ86	Oxysterol-binding protein-related protein 8 (ORP-8) (OSBP-related protein 8)	fat cell differentiation [GO:0045444]; intermembrane phospholipid transfer [GO:0120010]; negative regulation of cell migration [GO:0030336]; phospholipid transport [GO:0015914]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of insulin receptor signaling pathway [GO:0046628]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; protein localization to nuclear pore [GO:0090204]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN010089	Chromosome_4A	14728	9	201	35.74823465507876	0.42817669009806475	79.37341712784917	177	0.9209039548022598	88.11715481171548	21	1	78.26959645045426	156	0.9102564102564102	80.77651515151516	38	0.8947368421052632	methylated (>=50%)	Q4R6K2	Proton-coupled zinc antiporter SLC30A1 (Solute carrier family 30 member 1)	defense response to bacterium [GO:0042742]; detoxification of zinc ion [GO:0010312]; intracellular zinc ion homeostasis [GO:0006882]; zinc export across plasma membrane [GO:0140882]; zinc ion import into organelle [GO:0062111]	hit with GO BP
GN010090	Chromosome_4A	1888	4	59	39.40677966101695	0.8068376068376069	2.257941063911213	59	0	3.314917127071823	31	0	1.5062213490504257	28	0	0.6467840459935321	67	0	unmethylated (<10%)	Q7KM13	Hairy/enhancer-of-split related with YRPW motif protein	anterior/posterior pattern specification [GO:0009952]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron fate determination [GO:0048664]; Notch signaling pathway [GO:0007219]; regulation of neurogenesis [GO:0050767]	hit with GO BP
GN010091	Chromosome_4A	4142	3	83	38.725253500724286	0.535756752165789	1.7009847806624887	83	0	0.38461538461538464	35	0	2.2933794893985286	48	0	0.6841817186644773	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010092	Chromosome_4A	3143	4	105	36.430162265351576	1.0079440708094338	0.6358087487283826	105	0	0.8626410086264101	45	0	0.4948453608247423	60	0	0.5518763796909493	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010093	Chromosome_4A	1224	1	42	40.032679738562095	0.857872340425532	1.1942174732872408	42	0	1.1942174732872408	42	0	NA	NA	NA	0.5553627212773342	59	0	unmethylated (<10%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN010094	Chromosome_4A	9873	10	246	35.521118201154664	0.7901560624249699	0.657988842797883	245	0	0.899491591709034	62	0	0.6039387308533917	183	0	0.35587188612099646	48	0	unmethylated (<10%)	Q9UIG8	Solute carrier organic anion transporter family member 3A1 (OATP3A1) (Organic anion transporter polypeptide-related protein 3) (OATP-RP3) (OATPRP3) (Organic anion-transporting polypeptide D) (OATP-D) (PGE1 transporter) (Sodium-independent organic anion transporter D) (Solute carrier family 21 member 11)	phenylalanine transport [GO:0015823]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of MAPK cascade [GO:0043410]; prostaglandin transport [GO:0015732]; sodium-independent organic anion transport [GO:0043252]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]; tryptophan transport [GO:0015827]; tyrosine transport [GO:0015828]	hit with GO BP
GN010095	Chromosome_4A	1665	1	64	40.84084084084084	0.9276492761445447	0.774593338497289	64	0	0.774593338497289	64	0	NA	NA	NA	1.7105871474803513	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010096	Chromosome_4A	192	1	6	51.5625	0.47058823529411764	1.1764705882352942	6	0	1.1764705882352942	6	0	NA	NA	NA	0.8434370057986295	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010097	Chromosome_4A	423	1	16	51.30023640661938	0.5750212404418011	0.7352941176470589	14	0	0.7352941176470589	14	0	NA	NA	NA	1.0909090909090908	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010098	Chromosome_4A	1680	2	52	35.654761904761905	0.9768752515990518	0.7017543859649122	52	0	0.9332023575638507	38	0	0.12285012285012285	14	0	0.3711558854718982	31	0	unmethylated (<10%)	Q8MQJ9	Protein brain tumor	asymmetric cell division [GO:0008356]; asymmetric neuroblast division resulting in ganglion mother cell formation [GO:0055060]; brain development [GO:0007420]; ganglion mother cell fate determination [GO:0007402]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of neuroblast proliferation [GO:0007406]; negative regulation of translation [GO:0017148]; neural precursor cell proliferation [GO:0061351]; neuroblast development [GO:0014019]; neuroblast differentiation [GO:0014016]; neuroblast fate determination [GO:0007400]; neuroblast proliferation [GO:0007405]; neuron differentiation [GO:0030182]; oogenesis [GO:0048477]; regulation of neuroblast proliferation [GO:1902692]; regulation of neurogenesis [GO:0050767]; regulation of synaptic assembly at neuromuscular junction [GO:0008582]; regulation of synaptic vesicle endocytosis [GO:1900242]; regulation of translation [GO:0006417]; rRNA transcription [GO:0009303]; segmentation [GO:0035282]; ventral cord development [GO:0007419]	hit with GO BP
GN010099	Chromosome_4A	2905	3	92	39.036144578313255	0.8319817702415381	0.4484304932735426	10	0	NA	NA	NA	0.4484304932735426	10	0	0	2	0	unmethylated (<10%)	G2QDQ9	VAO-type flavoprotein oxidase VAO615	NA	hit, no GO BP
GN010100	Chromosome_4A	2351	3	72	38.706933219906425	0.820318974165128	0.4357298474945534	15	0	0.4830917874396135	12	0	0	3	0	0	1	0	unmethylated (<10%)	A0A0E0RTV6	FAD-linked oxidoreductase ZEB1 (EC 1.-.-.-) (Zearalenone biosynthesis protein 1)	zearalenone biosynthetic process [GO:0106150]	hit with GO BP
GN010101	Chromosome_4A	10645	7	317	36.41146077970878	0.9015768206456688	2.2362869198312234	164	0	0.8	15	0	2.316258351893096	149	0	23.272727272727273	19	0.3157894736842105	unmethylated (<10%)	A0R4Q3	Enoyl-CoA hydratase EchA19 (EC 4.2.1.-)	cholesterol catabolic process [GO:0006707]; fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN010102	Chromosome_4A	171	1	4	46.198830409356724	0.43902439024390244	0	1	0	0	1	0	NA	NA	NA	0.5617977528089888	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010103	Chromosome_4A	939	1	73	67.83812566560171	0.676606455433817	NA	0	NA	NA	NA	NA	NA	NA	NA	19.416058394160583	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010104	Chromosome_4A	753	1	52	52.855245683930946	1.047175866495507	0.6723716381418093	52	0	0.6723716381418093	52	0	NA	NA	NA	0.4656938838869916	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010105	Chromosome_4A	3500	3	114	40.857142857142854	0.780919723801024	0.5736636245110821	109	0	0.27932960893854747	39	0	0.6881564650488954	70	0	1.076320939334638	17	0	unmethylated (<10%)	A0A0E0RTV6	FAD-linked oxidoreductase ZEB1 (EC 1.-.-.-) (Zearalenone biosynthesis protein 1)	zearalenone biosynthetic process [GO:0106150]	hit with GO BP
GN010106	Chromosome_4A	3022	3	95	39.11317008603574	0.8225485280424039	0.425531914893617	15	0	2.272727272727273	4	0	0	11	0	0	4	0	unmethylated (<10%)	G2QDQ9	VAO-type flavoprotein oxidase VAO615	NA	hit, no GO BP
GN010107	Chromosome_4A	2351	3	71	38.62186303700553	0.8125048676012461	1.5202702702702702	31	0	0.205761316872428	23	0	7.547169811320755	8	0	0	12	0	unmethylated (<10%)	A0A0E0RTV6	FAD-linked oxidoreductase ZEB1 (EC 1.-.-.-) (Zearalenone biosynthesis protein 1)	zearalenone biosynthetic process [GO:0106150]	hit with GO BP
GN010108	Chromosome_4A	13629	13	129	34.404578472375086	0.3224544555853693	89.99586606035552	72	0.9861111111111112	91.96428571428571	18	1	89.67834853576572	54	0.9814814814814815	74.76635514018692	5	1	methylated (>=50%)	Q8CEE6	PAS domain-containing serine/threonine-protein kinase (PAS-kinase) (PASKIN) (EC 2.7.11.1)	energy homeostasis [GO:0097009]; intracellular signal transduction [GO:0035556]; negative regulation of glycogen biosynthetic process [GO:0045719]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of DNA-templated transcription [GO:0006355]; regulation of glucagon secretion [GO:0070092]; regulation of respiratory gaseous exchange [GO:0043576]	hit with GO BP
GN010109	Chromosome_4A	4580	8	126	36.09170305676856	0.845129827336233	0.7401177460050462	126	0	1.1758691206543967	51	0	0.5264477312609677	75	0	0.37746023186842814	56	0	unmethylated (<10%)	Q6DDK3	Dual oxidase maturation factor 1 (Dual oxidase activator 1)	protein localization to plasma membrane [GO:0072659]; protein transport [GO:0015031]	hit with GO BP
GN010110	Chromosome_4A	3833	2	128	40.62092355857031	0.8108549424033583	0.6638217164532954	128	0	0.6230529595015576	127	0	4.444444444444445	1	0	1.132342533616419	47	0	unmethylated (<10%)	Q9XSM3	Transient receptor potential cation channel subfamily V member 5 (TrpV5) (Epithelial calcium channel 1) (ECaC1) (Osm-9-like TRP channel 3) (OTRPC3)	calcium ion homeostasis [GO:0055074]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; protein homotetramerization [GO:0051289]; regulation of urine volume [GO:0035809]	hit with GO BP
GN010111	Chromosome_4A	8792	4	90	35.805277525022746	0.3216863899191271	72.73281821878813	90	0.8	15.856777493606138	7	0.2857142857142857	77.64523967307268	83	0.8433734939759037	95.22388059701493	20	1	methylated (>=50%)	Q8WUD4	Coiled-coil domain-containing protein 12	NA	hit, no GO BP
GN010112	Chromosome_4A	990	1	37	42.72727272727273	0.8213004484304933	0.8885298869143781	37	0	0.8885298869143781	37	0	NA	NA	NA	0.7392996108949417	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010113	Chromosome_4A	10701	9	172	34.89393514624801	0.5285826984893264	91.03307964735137	172	1	92.75730622617534	13	1	90.92438321050945	159	1	94.75542107917298	32	1	methylated (>=50%)	Q9DG68	Large ribosomal subunit protein uL10 (60S acidic ribosomal protein P0) (60S ribosomal protein L10E)	cytoplasmic translation [GO:0002181]; ribosomal large subunit assembly [GO:0000027]	hit with GO BP
GN010114	Chromosome_4A	15483	12	424	36.259122908996964	0.8345513422972792	2.314814814814815	419	0.002386634844868735	1.8170805572380375	94	0	2.42396068534998	325	0.003076923076923077	6.033755274261603	50	0.06	unmethylated (<10%)	Q71MB6	Solute carrier organic anion transporter family member 4C1 (SLCO4C1) (Organic anion transporting polypeptide 4C1) (OATP4C1) (Solute carrier family 21 member 20)	sodium-independent organic anion transport [GO:0043252]; transmembrane transport [GO:0055085]	hit with GO BP
GN010115	Chromosome_4A	1749	1	68	40.880503144654085	0.9320981848960782	0.49586776859504134	68	0	0.49586776859504134	68	0	NA	NA	NA	0.6648936170212766	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010116	Chromosome_4A	855	1	38	43.9766081871345	0.9259575923392613	0.6114130434782609	38	0	0.6114130434782609	38	0	NA	NA	NA	0.67543547813722	46	0	unmethylated (<10%)	Q8K354	Carbonyl reductase [NADPH] 3 (EC 1.1.1.184) (NADPH-dependent carbonyl reductase 3) (Quinone reductase CBR3) (EC 1.6.5.10)	cognition [GO:0050890]; phylloquinone catabolic process [GO:0042376]	hit with GO BP
GN010117	Chromosome_4A	1059	2	32	39.18791312559018	0.788093023255814	0.7501442585112522	32	0	0.7501442585112522	32	0	NA	NA	NA	0.7717041800643086	60	0	unmethylated (<10%)	Q96KE9	BTB/POZ domain-containing protein 6 (Lens BTB domain protein)	neurogenesis [GO:0022008]	hit with GO BP
GN010118	Chromosome_4A	8543	12	247	35.479339810371066	0.9190486519069819	0.6074994762935549	247	0	0.6495340299350466	84	0	0.5936920222634509	163	0	0.893407270486753	48	0	unmethylated (<10%)	H2A0N4	Protein PIF [Cleaved into: Protein Pif97; Protein Pif80 (Aragonite-binding protein)]	NA	hit, no GO BP
GN010119	Chromosome_4A	4414	3	58	37.313094698686	0.38046295415636294	63.79847155392018	58	0.8620689655172413	77.17190388170056	26	0.9615384615384616	57.89473684210526	32	0.78125	33.8689740420272	14	0.14285714285714285	methylated (>=50%)	Q8CJ96	Ras association domain-containing protein 8 (Carcinoma-associated protein HOJ-1 homolog)	signal transduction [GO:0007165]	hit with GO BP
GN010120	Chromosome_4A	6218	5	74	35.734963010614344	0.3787094650205761	89.5118025751073	74	0.9864864864864865	85.99033816425121	13	1	90.2156420984873	61	0.9836065573770492	67.1875	2	1	methylated (>=50%)	Q6IV56	RING finger protein 141	NA	hit, no GO BP
GN010121	Chromosome_4A	32213	19	295	35.212491851116006	0.2957085880206536	68.12058545110318	266	0.8270676691729323	76.74116424116424	84	0.9404761904761905	64.76479514415782	182	0.7747252747252747	72.51324308416716	22	0.8181818181818182	methylated (>=50%)	Q9D4C1	Lamin tail domain-containing protein 1 (Intermediate filament tail domain-containing protein 1) (Lamin-A-related sequence 1 protein)	cell population proliferation [GO:0008283]	hit with GO BP
GN010122	Chromosome_4A	997	2	29	36.81043129388164	0.8614802455157619	0.5949429846306395	29	0	0.47748976807639837	21	0	0.9074410163339383	8	0	0.45001607200257154	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010123	Chromosome_4A	1178	3	37	38.030560271646856	0.8687315634218289	0.6690997566909975	37	0	0.7303077725612936	27	0	0.5835156819839533	10	0	0.41293874741913283	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010124	Chromosome_4A	426	1	21	43.89671361502347	1.0240384615384615	0.3952569169960474	21	0	0.3952569169960474	21	0	NA	NA	NA	0.6970509383378016	41	0	unmethylated (<10%)	P86437	Cerebellin-1 (Precerebellin) [Cleaved into: Cerebellin (CER); [des-Ser1]-cerebellin]	cerebellar granule cell differentiation [GO:0021707]; heterophilic cell-cell adhesion [GO:0007157]; maintenance of synapse structure [GO:0099558]; negative regulation of excitatory postsynaptic potential [GO:0090394]; negative regulation of inhibitory synapse assembly [GO:1905703]; positive regulation of long-term synaptic depression [GO:1900454]; regulation of postsynaptic density assembly [GO:0099151]; regulation of presynapse assembly [GO:1905606]; synapse organization [GO:0050808]; trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission [GO:0099557]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010125	Chromosome_4A	2598	1	81	38.33718244803695	0.8500381721016469	1.5709502961627608	81	0	1.5709502961627608	81	0	NA	NA	NA	5.717574827321566	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010126	Chromosome_4A	1139	2	40	39.85952589991221	0.8844369382485975	1.2055837563451777	40	0	0.8706467661691543	20	0	1.5544041450777202	20	0	0.6134969325153374	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015590	Chromosome_4A	919	3	7	33.623503808487484	0.27432835820895524	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010127	Chromosome_4A	2229	2	26	37.55047106325706	0.33343305908750936	81.83108587650815	26	0.8846153846153846	72.76785714285714	9	0.7777777777777778	86.05619146722164	17	0.9411764705882353	70.6786171574904	11	1	methylated (>=50%)	Q9JJW0	Peroxisomal membrane protein 4 (24 kDa peroxisomal intrinsic membrane protein)	ether lipid metabolic process [GO:0046485]	hit with GO BP
GN010128	Chromosome_4A	3487	3	48	34.528247777459136	0.4627801202737264	95	8	1	NA	NA	NA	95	8	1	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010129	Chromosome_4A	8521	5	130	38.29362750850839	0.41730552326216563	38.095238095238095	9	0.1111111111111111	NA	NA	NA	38.095238095238095	9	0.1111111111111111	NA	NA	NA	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010130	Chromosome_4A	10670	5	146	33.70196813495782	0.48207214712140584	86.283386147578085	145	0.9448275862068966	89.28974069898534	14	1	85.94791797710404	131	0.9389312977099237	4.135148764498235	26	0	methylated (>=50%)	Q29RP8	Histone-lysine N-methyltransferase KMT5B (Lysine-specific methyltransferase 5B) (Suppressor of variegation 4-20 homolog 1) (Su(var)4-20 homolog 1) (Suv4-20h1) ([histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B) (EC 2.1.1.362) ([histone H4]-lysine20 N-methyltransferase KMT5B) (EC 2.1.1.361)	DNA repair [GO:0006281]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of isotype switching [GO:0045830]	hit with GO BP
GN010131	Chromosome_4A	5908	6	50	35.02031144211239	0.2762818486379511	79.31646693297824	50	0.94	85.25835866261399	11	1	76.86520376175548	39	0.9230769230769231	70.23882424984691	27	0.7037037037037037	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010132	Chromosome_4A	5719	5	143	34.44658157020458	0.842946065148131	0.7574044765995931	142	0	0.9582477754962354	30	0	0.7176709546377793	112	0	0.5386875612144956	57	0	unmethylated (<10%)	Q9IA95	Secreted frizzled-related protein 3 (sFRP-3) (Frizzled-related protein 1) (FrzB-1)	canonical Wnt signaling pathway [GO:0060070]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of Wnt signaling pathway [GO:0030178]; neural crest cell differentiation [GO:0014033]; non-canonical Wnt signaling pathway [GO:0035567]; regulation of cell differentiation [GO:0045595]; somite development [GO:0061053]	hit with GO BP
GN010133	Chromosome_4A	12348	16	281	33.98121153223194	0.789721971293787	0.6394640682095006	278	0	0.41237113402061853	85	0	0.7487595850248083	193	0	0.7518796992481203	37	0	unmethylated (<10%)	Q6Q899	Antiviral innate immune response receptor RIG-I (ATP-dependent RNA helicase DDX58) (EC 3.6.4.13) (DEAD box protein 58) (RIG-I-like receptor 1) (RLR-1) (RNA sensor RIG-I) (Retinoic acid-inducible gene 1 protein) (RIG-1) (Retinoic acid-inducible gene I protein) (RIG-I)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; gene expression [GO:0010467]; innate immune response [GO:0045087]; mRNA transcription [GO:0009299]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; regulation of cell migration [GO:0030334]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN010134	Chromosome_4A	7212	12	151	37.174154187465334	0.6087504821317771	0.8127949659150498	151	0	0.7019303083479569	71	0	0.9343226161033251	80	0	0.681635926222935	47	0	unmethylated (<10%)	O95786	Antiviral innate immune response receptor RIG-I (ATP-dependent RNA helicase DDX58) (EC 3.6.4.13) (DEAD box protein 58) (RIG-I-like receptor 1) (RLR-1) (RNA sensor RIG-I) (Retinoic acid-inducible gene 1 protein) (RIG-1) (Retinoic acid-inducible gene I protein) (RIG-I)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; gene expression [GO:0010467]; innate immune response [GO:0045087]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; regulation of cell migration [GO:0030334]; regulation of type III interferon production [GO:0034344]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN010135	Chromosome_4A	12010	16	301	35.3955037468776	0.8015376176194997	1.4704925499381873	297	0.003367003367003367	1.1992804317409553	112	0	1.601389156858962	185	0.005405405405405406	3.627267041901188	23	0	unmethylated (<10%)	Q6Q899	Antiviral innate immune response receptor RIG-I (ATP-dependent RNA helicase DDX58) (EC 3.6.4.13) (DEAD box protein 58) (RIG-I-like receptor 1) (RLR-1) (RNA sensor RIG-I) (Retinoic acid-inducible gene 1 protein) (RIG-1) (Retinoic acid-inducible gene I protein) (RIG-I)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; gene expression [GO:0010467]; innate immune response [GO:0045087]; mRNA transcription [GO:0009299]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; regulation of cell migration [GO:0030334]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN010136	Chromosome_4A	603	1	77	53.39966832504146	1.8048979591836736	1.9896193771626298	74	0	1.9896193771626298	74	0	NA	NA	NA	2.848297213622291	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010137	Chromosome_4A	1989	1	73	42.4333836098542	0.8153332996411785	0.5174035747883349	73	0	0.5174035747883349	73	0	NA	NA	NA	0.5882352941176471	67	0	unmethylated (<10%)	Q09388	Muscarinic acetylcholine receptor gar-2 (G protein-linked acetylcholine receptor 2)	adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway [GO:0007197]; chemical synaptic transmission [GO:0007268]; G protein-coupled receptor signaling pathway [GO:0007186]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; negative regulation of synaptic transmission, cholinergic [GO:0032223]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN003155	Chromosome_4A	614	1	19	40.87947882736157	0.7407924815849631	0.37735849056603776	18	0	0.37735849056603776	18	0	NA	NA	NA	0.5674378000872982	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010138	Chromosome_4A	165	1	4	46.666666666666664	0.44715447154471544	0	1	0	0	1	0	NA	NA	NA	1.9157088122605364	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010139	Chromosome_4A	516	2	16	41.86046511627907	0.7087912087912088	0.5873715124816447	16	0	0.5873715124816447	16	0	NA	NA	NA	11.82225845902976	41	0.0975609756097561	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010140	Chromosome_4A	20258	11	238	35.556323427781614	0.3730727351174945	85.28245001586798	213	0.9154929577464789	88.92713711990821	30	1	84.6975416628303	183	0.9016393442622951	85.15748031496064	33	1	methylated (>=50%)	Q6DJB3	Differentially expressed in FDCP 8 homolog (DEF-8)	lysosome localization [GO:0032418]; positive regulation of bone resorption [GO:0045780]; positive regulation of ruffle assembly [GO:1900029]	hit with GO BP
GN010141	Chromosome_4A	3169	3	65	40.80151467339855	0.49286726070269804	52.216960826517436	60	0.5	76.47783251231527	19	0.8421052631578947	39.17935142289874	41	0.34146341463414637	0.4923903312444047	54	0	methylated (>=50%)	P24032	Myosin regulatory light chain 2, smooth muscle minor isoform (MLC-2) (DTNB) (G1) (Isoform L20-B1)	NA	hit, no GO BP
GN010142	Chromosome_4A	18146	17	132	35.34112201036041	0.23331763772603184	81.65838283428295	132	0.9015151515151515	88.73465029364655	34	0.9705882352941176	79.57967377666249	98	0.8775510204081632	74.14918414918415	48	0.7708333333333334	methylated (>=50%)	Q5ZJK1	THO complex subunit 5 homolog	mRNA export from nucleus [GO:0006406]	hit with GO BP
GN010143	Chromosome_4A	7818	11	141	38.02762854950115	0.4989919108427299	90.18248175182482	141	1	94.07979407979408	29	1	89.27392739273927	112	1	94.14348462664715	24	1	methylated (>=50%)	Q6UX01	Protein LMBR1L (Limb region 1 protein homolog-like) (Lipocalin-1-interacting membrane receptor) (LIMR)	hematopoietic stem cell differentiation [GO:0060218]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; receptor-mediated endocytosis [GO:0006898]; signal transduction [GO:0007165]; T cell apoptotic process [GO:0070231]; T cell differentiation [GO:0030217]; T cell proliferation [GO:0042098]	hit with GO BP
GN010144	Chromosome_4A	16360	13	253	36.35085574572127	0.4686669530624229	87.97885609075252	236	0.9915254237288136	92.74891774891775	41	1	87.39075321902729	195	0.9897435897435898	82.1917808219178	22	0.9090909090909091	methylated (>=50%)	Q6A4L1	Solute carrier family 12 member 8	cell volume homeostasis [GO:0006884]; chloride ion homeostasis [GO:0055064]; potassium ion homeostasis [GO:0055075]; potassium ion import across plasma membrane [GO:1990573]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN010145	Chromosome_4A	554	2	15	41.335740072202164	0.6344480073293632	1.0135135135135136	15	0	0.9208103130755064	14	0	2.0408163265306123	1	0	1.1115095016134815	38	0	unmethylated (<10%)	Q9CXS4	Centromere protein V (CENP-V) (Proline-rich protein 6)	ameboidal-type cell migration [GO:0001667]; chromosome segregation [GO:0007059]; kinetochore assembly [GO:0051382]; meiotic metaphase chromosome alignment [GO:0051311]; pericentric heterochromatin formation [GO:0031508]; polar body extrusion after meiotic divisions [GO:0040038]; positive regulation of cytokinesis [GO:0032467]; regulation of chromosome organization [GO:0033044]; spindle assembly [GO:0051225]	hit with GO BP
GN010146	Chromosome_4A	21361	7	596	36.94583586910725	0.8180496383173842	5.515540593439286	565	0.0017699115044247787	2.5641025641025643	69	0	5.824109304738845	496	0.0020161290322580645	1.394169835234474	37	0	unmethylated (<10%)	P10826	Retinoic acid receptor beta (RAR-beta) (HBV-activated protein) (Nuclear receptor subfamily 1 group B member 2) (RAR-epsilon)	cell differentiation [GO:0030154]; embryonic digestive tract development [GO:0048566]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; retinoic acid receptor signaling pathway [GO:0048384]; signal transduction [GO:0007165]	hit with GO BP
GN010147	Chromosome_4A	705	1	26	39.290780141843975	0.9814735489398158	0.5139920045688178	26	0	0.5139920045688178	26	0	NA	NA	NA	0.6124234470691163	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN006064	Chromosome_4A	222	1	11	43.693693693693696	1.2149253731343284	35.15625	11	0	35.15625	11	0	NA	NA	NA	0.8996539792387543	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010148	Chromosome_4A	2078	2	32	39.41289701636189	0.3965696155727048	87.88881535407015	32	0.9375	87.88881535407015	32	0.9375	NA	NA	NA	89.739663093415	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010149	Chromosome_4A	447	1	15	48.09843400447427	0.5823345492443981	0	6	0	0	6	0	NA	NA	NA	0.2820874471086037	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010150	Chromosome_4A	285	1	9	49.12280701754386	0.6149604411412132	0	9	0	0	9	0	NA	NA	NA	0.17152658662092624	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010151	Chromosome_4A	3152	4	111	37.753807106598984	0.9886713330187267	0.44382801664355065	93	0	0.4147465437788018	76	0	0.4878048780487805	17	0	0.4006868918145392	54	0	unmethylated (<10%)	O00222	Metabotropic glutamate receptor 8 (mGluR8)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; regulation of synaptic transmission, glutamatergic [GO:0051966]; visual perception [GO:0007601]	hit with GO BP
GN010152	Chromosome_4A	10310	3	163	36.624636275460716	0.47278356942550154	77.86063027075011	162	0.8641975308641975	87.23792160437557	16	0.9375	76.84893784421715	146	0.8561643835616438	81.51515151515152	11	0.9090909090909091	methylated (>=50%)	Q8IXX5	Transmembrane protein 183A	NA	hit, no GO BP
GN010153	Chromosome_4A	10989	5	247	35.45363545363546	0.7153363561972004	2.4283803758710496	244	0	0.6881948120698782	42	0	2.695242734210099	202	0	40.78733766233766	43	0.4418604651162791	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010154	Chromosome_4A	17383	19	196	35.40815739515619	0.36103425613698303	82.47056786703601	195	0.9282051282051282	70.77877325982081	25	0.84	84.15008415008415	170	0.9411764705882353	0.8205689277899344	38	0	methylated (>=50%)	P48147	Prolyl endopeptidase (PE) (EC 3.4.21.26) (Post-proline cleaving enzyme)	angiotensin maturation [GO:0002003]; proteolysis [GO:0006508]	hit with GO BP
GN010155	Chromosome_4A	16830	7	209	33.42840166369578	0.44553061533907545	80.75280825067333	202	0.9405940594059405	78.16091954022988	9	1	80.82905058155261	193	0.9378238341968912	79.83446200150489	22	0.8636363636363636	methylated (>=50%)	Q29RK9	MOB kinase activator 3B (Mob1 homolog 2b) (Mps one binder kinase activator-like 2B)	regulation of hippo signaling [GO:0035330]	hit with GO BP
GN010156	Chromosome_4A	1809	6	50	40.35378662244334	0.6789724957963007	0.5889520714865962	48	0	0.6163328197226502	44	0	0.26246719160104987	4	0	0.3674969375255206	42	0	unmethylated (<10%)	P53470	Actin-1 (EC 3.6.4.-)	NA	hit, no GO BP
GN010157	Chromosome_4A	216	1	1	45.370370370370374	0.11267605633802817	NA	0	NA	NA	NA	NA	NA	NA	NA	18.072289156626507	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010158	Chromosome_4A	219	1	8	40.182648401826484	0.9358974358974359	0.8982035928143712	8	0	0.8982035928143712	8	0	NA	NA	NA	0.9664582148948266	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010159	Chromosome_4A	1167	4	27	33.67609254498715	0.8451984978540773	0.28785261945883706	27	0	0.3404255319148936	20	0	0.17793594306049823	7	0	0.778485491861288	36	0	unmethylated (<10%)	P04464	Calmodulin (CaM)	NA	hit, no GO BP
GN010160	Chromosome_4A	1952	2	43	39.1905737704918	0.5760641291367549	95.1846657316503	43	1	95.40816326530613	30	1	94.91173416407061	13	1	77.67441860465117	31	0.8064516129032258	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010161	Chromosome_4A	447	1	1	37.360178970917225	0.0707054729515976	61.111111111111114	1	1	61.111111111111114	1	1	NA	NA	NA	6.179966044142614	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010162	Chromosome_4A	567	1	22	38.447971781305114	1.0571186440677967	0.35842293906810035	22	0	0.35842293906810035	22	0	NA	NA	NA	3.615002259376412	48	0	unmethylated (<10%)	Q5RJQ0	Carbohydrate sulfotransferase 1 (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 1) (GST-1) (Keratan sulfate Gal-6 sulfotransferase) (KS6ST) (KSGal6ST) (KSST) (EC 2.8.2.21)	galactose metabolic process [GO:0006012]; keratan sulfate proteoglycan biosynthetic process [GO:0018146]; keratan sulfate proteoglycan metabolic process [GO:0042339]; N-acetylglucosamine metabolic process [GO:0006044]; sulfur compound metabolic process [GO:0006790]	hit with GO BP
GN010163	Chromosome_4A	7024	4	161	33.12927107061503	0.835380051295992	0.8519224302208273	161	0	0.7531380753138075	23	0	0.8672016567434636	138	0	0.8717595778848359	63	0	unmethylated (<10%)	O45035	Fatty acid-binding protein (Sj-FABPc) (Sj14FABP)	NA	hit, no GO BP
GN010164	Chromosome_4A	1249	2	21	40.27221777421938	0.4152655077419968	82.93577981651376	8	1	82.93577981651376	8	1	NA	NA	NA	84.822695035461	9	0.8888888888888888	methylated (>=50%)	Q9BX70	BTB/POZ domain-containing protein 2	neurogenesis [GO:0022008]	hit with GO BP
GN010165	Chromosome_4A	3067	3	113	39.55004890772742	0.9434713722586406	0.9801686801914749	111	0	0.8344923504867872	25	0	1.0087241003271539	86	0	0.39308176100628933	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010166	Chromosome_4A	1968	1	63	38.0589430894309	0.8848541943219287	0.7391304347826086	63	0	0.7391304347826086	63	0	NA	NA	NA	0.45977011494252873	58	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN010167	Chromosome_4A	591	1	23	51.43824027072758	0.6021262458471761	1.1650485436893203	18	0	1.1650485436893203	18	0	NA	NA	NA	0.6822833750284285	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010168	Chromosome_4A	558	1	30	45.340501792114694	1.04625	0.7228915662650602	30	0	0.7228915662650602	30	0	NA	NA	NA	0.5241935483870968	65	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN010169	Chromosome_4A	1297	2	43	38.16499614494988	0.9140389406057428	0.6635700066357001	43	0	0.9354536950420954	35	0	0	8	0	0.5659709939865581	56	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN010170	Chromosome_4A	604	2	11	38.41059602649007	0.5104878985785632	1.443001443001443	11	0	1.443001443001443	11	0	NA	NA	NA	0.8620689655172413	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010171	Chromosome_4A	18731	13	253	35.758902354385775	0.42360251500817003	67.76565281324974	231	0.7142857142857143	72.0594665500656	40	0.8	66.84220425051721	191	0.6963350785340314	0.6491288008199522	60	0	methylated (>=50%)	Q15119	[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2) (PDKII)	cellular response to nutrient [GO:0031670]; cellular response to reactive oxygen species [GO:0034614]; glucose homeostasis [GO:0042593]; glucose metabolic process [GO:0006006]; insulin receptor signaling pathway [GO:0008286]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; regulation of gluconeogenesis [GO:0006111]; regulation of glucose metabolic process [GO:0010906]; regulation of ketone metabolic process [GO:0010565]; regulation of pH [GO:0006885]; regulation of pyruvate decarboxylation to acetyl-CoA [GO:0010510]	hit with GO BP
GN010172	Chromosome_4A	12482	11	307	35.386957218394485	0.7860917436010632	0.526883768171142	307	0	0.43999022243950137	92	0	0.5573658034642428	215	0	0.5828220858895705	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010173	Chromosome_4A	1090	2	33	36.14678899082569	0.9297456575682382	0.7270323859881032	33	0	0.7177033492822966	13	0	0.730593607305936	20	0	0.5154639175257731	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010174	Chromosome_4A	1167	1	50	40.87403598971722	1.0271079035381094	0.5838198498748958	50	0	0.5838198498748958	50	0	NA	NA	NA	1.0620220900594732	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010175	Chromosome_4A	21942	5	404	35.30671771032723	0.5918044606806383	25.216723362229782	399	0.3107769423558897	45.8974358974359	65	0.4153846153846154	23.28093123724949	334	0.2904191616766467	86.56716417910448	27	1	sparse (10-50%)	Q8VDK3	ETS-related transcription factor Elf-5 (E74-like factor 5)	cell differentiation [GO:0030154]; ectoderm development [GO:0007398]; ectodermal cell fate commitment [GO:0001712]; mammary gland epithelial cell differentiation [GO:0060644]; negative regulation of cell differentiation [GO:0045596]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; somatic stem cell population maintenance [GO:0035019]	hit with GO BP
GN010176	Chromosome_4A	273	1	14	42.49084249084249	1.2429268292682927	96.61458333333333	14	1	96.61458333333333	14	1	NA	NA	NA	81.18659698739624	57	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010177	Chromosome_4A	2576	2	42	36.21894409937888	0.5045562654479318	24.874715261958997	42	0.3333333333333333	13.285457809694794	10	0.2	28.815628815628816	32	0.375	0.8945210585165859	41	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010178	Chromosome_4A	6158	8	60	34.54043520623579	0.3297379980473456	92.88444575124963	60	0.9833333333333333	95.92074592074592	17	1	91.8600078647267	43	0.9767441860465116	85.85326307255777	34	0.9705882352941176	methylated (>=50%)	Q7T3B0	Eukaryotic translation initiation factor 3 subunit M (eIF3m)	cytoplasmic translational initiation [GO:0002183]; formation of cytoplasmic translation initiation complex [GO:0001732]	hit with GO BP
GN010179	Chromosome_4A	1955	2	59	39.64194373401534	0.7688436516823974	0.7759784075573549	59	0	0.8659981768459435	49	0	0.5194805194805194	10	0	4.848484848484849	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010180	Chromosome_4A	162	1	4	46.2962962962963	0.4648493543758967	0.32894736842105265	4	0	0.32894736842105265	4	0	NA	NA	NA	0.4122938530734633	61	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018342	Chromosome_4A	8140	12	121	37.85012285012285	0.41504011596548	13.633377135348226	54	0.018518518518518517	7.269155206286837	17	0	14.911242603550296	37	0.02702702702702703	14.135338345864662	16	0	sparse (10-50%)	O75445	Usherin (Usher syndrome type IIa protein) (Usher syndrome type-2A protein)	establishment of protein localization [GO:0045184]; hair cell differentiation [GO:0035315]; inner ear receptor cell differentiation [GO:0060113]; maintenance of animal organ identity [GO:0048496]; photoreceptor cell maintenance [GO:0045494]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN018343	Chromosome_4A	1197	1	33	49.79114452798663	0.5051601764818723	3.9473684210526314	11	0	3.9473684210526314	11	0	NA	NA	NA	7.484076433121019	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018344	Chromosome_4A	563	2	7	37.12255772646537	0.37011645379413977	NA	0	NA	NA	NA	NA	NA	NA	NA	24.444444444444443	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018345	Chromosome_4A	761	2	9	33.90275952693824	0.41219306692344726	50.62240663900415	7	0.8571428571428571	46.614583333333336	5	0.8	55.1622418879056	2	1	65.02032826381568	42	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010184	Chromosome_4A	1230	1	8	37.642276422764226	0.18375350140056024	0.7751937984496124	8	0	0.7751937984496124	8	0	NA	NA	NA	0.8909853249475891	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010185	Chromosome_4A	465	1	9	41.29032258064516	0.46707589285714285	0.7125890736342043	9	0	0.7125890736342043	9	0	NA	NA	NA	0.8058608058608059	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010186	Chromosome_4A	17925	6	243	38.53835425383542	0.36510999339063127	78.90111840937334	226	0.915929203539823	69.34673366834171	10	0.8	79.62750716332378	216	0.9212962962962963	36.733870967741936	35	0.34285714285714286	methylated (>=50%)	P82890	Low molecular weight phosphotyrosine protein phosphatase 1 (EC 3.1.3.48) (Low molecular weight cytosolic acid phosphatase 1) (EC 3.1.3.2) (PTPase 1)	NA	hit, no GO BP
GN010187	Chromosome_4A	4152	5	49	36.65703275529865	0.352278098978219	54.36265709156194	48	0.625	41.09494109494109	27	0.48148148148148145	68.62891207153503	21	0.8095238095238095	28.71794871794872	19	0.3684210526315789	methylated (>=50%)	F6UF99	Transmembrane protein 237	cilium assembly [GO:0060271]; regulation of Wnt signaling pathway [GO:0030111]	hit with GO BP
GN010188	Chromosome_4A	228	1	7	42.54385964912281	0.6909090909090909	0	7	0	0	7	0	NA	NA	NA	0.3698224852071006	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010189	Chromosome_4A	745	2	27	37.986577181208055	1.0101948573724386	0.7856341189674523	27	0	1.0169491525423728	21	0	0.33222591362126247	6	0	0.4484304932735426	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010190	Chromosome_4A	3586	6	115	35.49916341327384	1.017920173771382	0.5771450557906888	114	0	0.5536332179930796	44	0	0.5861977084998667	70	0	0.5251312828207052	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010191	Chromosome_4A	6938	5	212	37.86393773421735	0.8528778021315335	2.572917821891982	194	0	0.44025157232704404	35	0	3.0294870068668374	159	0	0.4619648906683092	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010192	Chromosome_4A	2439	1	104	43.58343583435834	0.9010870337477798	0.33769523005487545	104	0	0.33769523005487545	104	0	NA	NA	NA	0.4605641911341393	57	0	unmethylated (<10%)	Q7T2C4	Prestin (Solute carrier family 26 member 5)	chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; oxalate transport [GO:0019532]; regulation of membrane potential [GO:0042391]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN010193	Chromosome_4A	354	1	18	39.548022598870055	1.3004081632653062	0.29985007496251875	18	0	0.29985007496251875	18	0	NA	NA	NA	0.8047210300429185	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010194	Chromosome_4A	1410	1	59	43.54609929078014	0.8876440460947503	0.7525083612040134	59	0	0.7525083612040134	59	0	NA	NA	NA	0.5652173913043478	65	0	unmethylated (<10%)	Q7T2C4	Prestin (Solute carrier family 26 member 5)	chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; oxalate transport [GO:0019532]; regulation of membrane potential [GO:0042391]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN010195	Chromosome_4A	2052	1	88	41.228070175438596	1.0094812164579607	0.7855973813420621	88	0	0.7855973813420621	88	0	NA	NA	NA	0.27280994240678996	58	0	unmethylated (<10%)	A0FKN5	Prestin (Solute carrier family 26 member 5)	NA	hit, no GO BP
GN010196	Chromosome_4A	6742	4	172	33.81785820231385	0.8924688150328166	1.4645577035735209	169	0	1.5363128491620113	21	0	1.4591643921897963	148	0	9.25	18	0	unmethylated (<10%)	Q6UX65	DNA damage-regulated autophagy modulator protein 2 (Transmembrane protein 77)	photoreceptor cell maintenance [GO:0045494]; regulation of autophagy [GO:0010506]; visual perception [GO:0007601]	hit with GO BP
GN010197	Chromosome_4A	11124	4	301	32.263574253865514	1.039806964914569	0.7484690405987753	300	0	0.42161747796090454	52	0	0.7923441037250463	248	0	0.3912127595546193	74	0	unmethylated (<10%)	Q15699	ALX homeobox protein 1 (Cartilage homeoprotein 1) (CART-1)	embryonic skeletal system morphogenesis [GO:0048704]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron development [GO:0048666]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN010198	Chromosome_4A	5256	5	54	37.233637747336374	0.29663507564704455	89.33539412673879	54	1	92.11045364891518	12	1	88.81964809384164	42	1	57.46980292434838	58	0.4827586206896552	methylated (>=50%)	Q172Y1	Mediator of RNA polymerase II transcription subunit 30 (Mediator complex subunit 30)	positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN010199	Chromosome_4A	14816	11	181	33.538066954643625	0.43602048000208116	83.92193308550186	180	0.9111111111111111	84.58117123795404	24	0.9166666666666666	83.83713168685038	156	0.9102564102564102	60.05089058524173	47	0.6382978723404256	methylated (>=50%)	P13706	Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic (GPD-C) (GPDH-C) (EC 1.1.1.8)	ethanol metabolic process [GO:0006067]; flight behavior [GO:0007629]; glycerol-3-phosphate biosynthetic process [GO:0046167]; glycerol-3-phosphate catabolic process [GO:0046168]; glycerol-3-phosphate metabolic process [GO:0006072]; glycerol-3-phosphate shuttle [GO:0006127]; glycerophospholipid metabolic process [GO:0006650]; glycolytic process [GO:0006096]; response to hyperoxia [GO:0055093]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN010200	Chromosome_4A	11879	9	139	32.056570418385384	0.4554730773474567	85.1303317535545	139	0.8992805755395683	58.34018077239113	20	0.6	88.78913702165862	119	0.9495798319327731	40.224215246636774	32	0.40625	methylated (>=50%)	P78318	Immunoglobulin-binding protein 1 (B-cell signal transduction molecule alpha 4) (Protein alpha-4) (CD79a-binding protein 1) (Protein phosphatase 2/4/6 regulatory subunit) (Renal carcinoma antigen NY-REN-16)	intracellular signal transduction [GO:0035556]; negative regulation of stress-activated MAPK cascade [GO:0032873]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of microtubule-based movement [GO:0060632]; response to interleukin-1 [GO:0070555]; response to tumor necrosis factor [GO:0034612]; signal transduction [GO:0007165]	hit with GO BP
GN010201	Chromosome_4A	656	2	6	35.36585365853659	0.2974831834328471	76.696832579185525	6	0.8333333333333334	16	1	0	89.1008174386921	5	1	42.857142857142854	41	0.2682926829268293	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010202	Chromosome_4A	4118	4	72	35.18698397280233	0.5663789842863528	74.5014245014245	72	0.7777777777777778	60.74766355140187	26	0.5769230769230769	80.5327868852459	46	0.8913043478260869	3.0991735537190084	9	0.1111111111111111	methylated (>=50%)	Q1L8G7	GATA zinc finger domain-containing protein 1	chromatin organization [GO:0006325]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN010203	Chromosome_4A	8509	12	101	35.08050299682689	0.3906699323676241	88.3394294074616	100	0.92	89.3320518981259	36	0.8611111111111112	87.90492217080353	64	0.953125	NA	NA	NA	methylated (>=50%)	Q3SZ20	Serine hydroxymethyltransferase, mitochondrial (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (Serine methylase)	glycine metabolic process [GO:0006544]; L-serine metabolic process [GO:0006563]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; protein K63-linked deubiquitination [GO:0070536]; protein tetramerization [GO:0051262]; regulation of aerobic respiration [GO:1903715]; regulation of mitochondrial translation [GO:0070129]; regulation of oxidative phosphorylation [GO:0002082]; response to type I interferon [GO:0034340]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	hit with GO BP
GN010204	Chromosome_4A	192	1	0	42.708333333333336	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010205	Chromosome_4A	387	1	0	41.08527131782946	0	NA	0	NA	NA	NA	NA	NA	NA	NA	5.607476635514018	17	0.058823529411764705	NA	NA	NA	NA	no Swiss-Prot hit
GN010206	Chromosome_4A	1773	1	62	40.496333897349125	0.8678003031451307	0.6497948016415869	62	0	0.6497948016415869	62	0	NA	NA	NA	0.6993006993006993	75	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN010207	Chromosome_4A	1395	1	58	40.28673835125448	1.0322127958155258	0.755984880302394	58	0	0.755984880302394	58	0	NA	NA	NA	0.6183249016301293	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010208	Chromosome_4A	8305	11	224	36.941601444912706	0.7905668451652191	1.9121951219512194	224	0	1.724770642201835	75	0	1.9800664451827243	149	0	0.6100040666937779	68	0	unmethylated (<10%)	Q95WY5	Alpha-glucosidase (EC 3.2.1.20) (Binary toxin-binding alpha-glucosidase) (Culex pipiens maltase 1) (Cpm1)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN010209	Chromosome_4A	402	1	21	50.995024875621894	0.8199300699300699	0.4807692307692308	21	0	0.4807692307692308	21	0	NA	NA	NA	0.7827788649706457	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010210	Chromosome_4A	2600	5	69	39.07692307692308	0.6956319432327109	1.0298661174047374	66	0	1.1269722013523666	34	0	0.9481668773704172	32	0	0.48259220958290244	42	0	unmethylated (<10%)	A0A0E0SNE8	Delta(7)-sterol 5(6)-desaturase ERG3B (EC 1.14.19.20) (C-5 sterol desaturase ERG3B) (Ergosterol Delta(5,6) desaturase ERG3B) (Ergosterol biosynthetic protein 3B)	sterol biosynthetic process [GO:0016126]	hit with GO BP
GN010211	Chromosome_4A	22606	16	599	35.34017517473237	0.8486449438700808	0.8754707264475844	598	0	0.6921241050119332	89	0	0.9040514900107891	509	0	0.8276358402302987	49	0.02040816326530612	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010212	Chromosome_4A	5777	5	54	36.956898043967456	0.2738549216248104	68.07909604519774	54	0.7962962962962963	52.95774647887324	8	0.75	70.60763071125766	46	0.8043478260869565	43.55488418932528	36	0.4722222222222222	methylated (>=50%)	P31478	V-type proton ATPase subunit F (V-ATPase subunit F) (V-ATPase 14 kDa subunit) (Vacuolar proton pump subunit F)	NA	hit, no GO BP
GN010213	Chromosome_4A	2573	2	31	37.388262728332684	0.3449359972323128	92.58630447085456	31	1	92.90989660265879	14	1	92.38532110091744	17	1	23.306370070778563	36	0.25	methylated (>=50%)	Q6P135	Transmembrane and ubiquitin-like domain-containing protein 1	ERAD pathway [GO:0036503]	hit with GO BP
GN010214	Chromosome_4A	34631	39	393	36.27674626779475	0.34782929712837296	88.0860476211129	373	0.9597855227882037	92.97902826624984	142	0.9788732394366197	85.64369310793238	231	0.948051948051948	38.503850385038504	13	0.15384615384615385	methylated (>=50%)	A2AUY4	Bromodomain adjacent to zinc finger domain protein 2B	NA	hit, no GO BP
GN010215	Chromosome_4A	10983	10	177	35.65510334152781	0.5070795836919947	90.76312307013674	177	0.9830508474576272	89.30675124603535	39	0.9743589743589743	91.11524978089395	138	0.9855072463768116	56.57754010695187	42	0.5714285714285714	methylated (>=50%)	Q8N9V3	WD repeat, SAM and U-box domain-containing protein 1	protein ubiquitination [GO:0016567]	hit with GO BP
GN010216	Chromosome_4A	74463	18	805	35.135570686112565	0.3516615460791279	73.77830061326031	793	0.8448928121059268	68.16635160680529	58	0.8620689655172413	74.07994472555833	735	0.8435374149659864	27.025495750708217	44	0.38636363636363635	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010217	Chromosome_4A	12985	9	119	35.53330766268772	0.29495995974595357	81.5947242206235	114	0.9473684210526315	89.05388205345778	55	0.9818181818181818	77.52027809965237	59	0.9152542372881356	55	5	0.6	methylated (>=50%)	Q00969	Cyclic AMP-dependent transcription factor ATF-2 (cAMP-dependent transcription factor ATF-2) (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1)	abducens nucleus development [GO:0021742]; adipose tissue development [GO:0060612]; amelogenesis [GO:0097186]; apoptotic process [GO:0006915]; BMP signaling pathway [GO:0030509]; brainstem development [GO:0003360]; cellular response to anisomycin [GO:0072740]; cellular response to leucine starvation [GO:1990253]; cellular response to oxidative stress [GO:0034599]; cellular response to virus [GO:0098586]; detection of cell density [GO:0060245]; DNA damage response [GO:0006974]; facial nucleus development [GO:0021754]; fat cell differentiation [GO:0045444]; gene expression [GO:0010467]; growth plate cartilage chondrocyte differentiation [GO:0003418]; growth plate cartilage chondrocyte proliferation [GO:0003419]; heart development [GO:0007507]; hematopoietic progenitor cell differentiation [GO:0002244]; hepatocyte apoptotic process [GO:0097284]; hypoglossal nucleus development [GO:0021743]; in utero embryonic development [GO:0001701]; intracellular glucose homeostasis [GO:0001678]; intrinsic apoptotic signaling pathway in response to hypoxia [GO:1990144]; JNK cascade [GO:0007254]; lipid metabolic process [GO:0006629]; liver development [GO:0001889]; MAPK cascade [GO:0000165]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; motor neuron apoptotic process [GO:0097049]; mRNA transcription by RNA polymerase II [GO:0042789]; negative regulation of angiogenesis [GO:0016525]; negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neurofilament cytoskeleton organization [GO:0060052]; NK T cell differentiation [GO:0001865]; outflow tract morphogenesis [GO:0003151]; p38MAPK cascade [GO:0038066]; peptidyl-threonine phosphorylation [GO:0018107]; positive regulation of cardiac muscle myoblast proliferation [GO:0110024]; positive regulation of gene expression [GO:0010628]; positive regulation of mitochondrial membrane permeability involved in apoptotic process [GO:1902110]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transforming growth factor beta2 production [GO:0032915]; protein import into nucleus [GO:0006606]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; response to osmotic stress [GO:0006970]; transcription initiation-coupled chromatin remodeling [GO:0045815]; vacuole organization [GO:0007033]; white fat cell differentiation [GO:0050872]	hit with GO BP
GN010218	Chromosome_4A	1158	1	46	42.141623488773746	0.8996149429169763	0.691085003455425	46	0	0.691085003455425	46	0	NA	NA	NA	0.5471956224350205	50	0	unmethylated (<10%)	Q11082	Probable G protein-coupled receptor B0563.6	NA	hit, no GO BP
GN010219	Chromosome_4A	2151	1	88	41.88749418874942	0.9330967169476486	0.3093239063190455	88	0	0.3093239063190455	88	0	NA	NA	NA	0.5104408352668214	57	0	unmethylated (<10%)	Q5RBP9	Macrophage-expressed gene 1 protein (Macrophage gene 1 protein) (Mpg-1) (Perforin-2) (P-2) [Cleaved into: Macrophage-expressed gene 1 protein, processed form]	antibacterial innate immune response [GO:0140367]; antigen processing and presentation of exogenous peptide antigen [GO:0002478]; antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]; defense response to bacterium [GO:0042742]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; dendritic cell antigen processing and presentation [GO:0002468]	hit with GO BP
GN015594	Chromosome_4A	649	2	15	37.750385208012325	0.653531149301826	0.6622516556291391	15	0	0.5961251862891207	13	0	0.851063829787234	2	0	1.4104372355430184	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015593	Chromosome_4A	661	1	15	37.518910741301056	0.6657937147461724	0.15408320493066255	15	0	0.15408320493066255	15	0	NA	NA	NA	1.5082266910420474	55	0	unmethylated (<10%)	Q17QR8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN018730	Chromosome_4A	231	1	9	48.917748917748916	0.6537735849056604	NA	0	NA	NA	NA	NA	NA	NA	NA	1	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010220	Chromosome_4A	10160	3	226	33.96653543307087	0.771769716737228	1.3912375096079939	225	0	0.5201560468140443	13	0	1.4459602973613266	212	0	1.0248901903367496	47	0	unmethylated (<10%)	Q9P2N4	A disintegrin and metalloproteinase with thrombospondin motifs 9 (ADAM-TS 9) (ADAM-TS9) (ADAMTS-9) (EC 3.4.24.-)	aorta morphogenesis [GO:0035909]; endothelial cell-matrix adhesion [GO:0090673]; extracellular matrix organization [GO:0030198]; heart valve morphogenesis [GO:0003179]; negative regulation of endothelial cell migration [GO:0010596]; negative regulation of sprouting angiogenesis [GO:1903671]; proteolysis [GO:0006508]; ventricular cardiac muscle tissue development [GO:0003229]	hit with GO BP
GN010221	Chromosome_4A	276	1	18	52.17391304347826	0.9585182326837739	0	18	0	0	18	0	NA	NA	NA	0.6048387096774194	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010222	Chromosome_4A	2658	3	70	34.838224228743414	0.8794668179239932	0.7191288267926854	68	0	0.8783783783783784	45	0	0.47194546407970633	23	0	0.5561172901921132	64	0	unmethylated (<10%)	P50476	Homeobox protein XHOX-3	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010223	Chromosome_4A	1155	3	49	44.935064935064936	0.8838273417247088	1.3089005235602094	49	0	1.993704092339979	37	0	0.17391304347826086	12	0	0.45882637044192226	61	0	unmethylated (<10%)	P50476	Homeobox protein XHOX-3	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010224	Chromosome_4A	905	3	30	39.11602209944751	0.8688556067588326	0.6926406926406926	30	0	0.7551240560949298	25	0	0.43859649122807015	5	0	0.8226950354609929	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010225	Chromosome_4A	849	1	53	46.996466431095406	1.195520484616611	0.42656916514320536	53	0	0.42656916514320536	53	0	NA	NA	NA	1.2235817575083425	36	0	unmethylated (<10%)	Q5M9G1	Protein HEXIM1 (Cardiac lineage protein 1)	activation of innate immune response [GO:0002218]; heart development [GO:0007507]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; negative regulation of viral transcription [GO:0032897]; positive regulation of signal transduction by p53 class mediator [GO:1901798]	hit with GO BP
GN010226	Chromosome_4A	23833	18	204	33.66340787983049	0.3059554539745189	87.44619292922165	203	0.9408866995073891	83.20746334962239	48	0.8541666666666666	88.24664429530202	155	0.967741935483871	2.875112309074573	34	0	methylated (>=50%)	Q9WU78	Programmed cell death 6-interacting protein (ALG-2-interacting protein 1) (ALG-2-interacting protein X) (E2F1-inducible protein) (Eig2)	actomyosin contractile ring assembly [GO:0000915]; apoptotic process [GO:0006915]; bicellular tight junction assembly [GO:0070830]; extracellular exosome biogenesis [GO:0097734]; macroautophagy [GO:0016236]; maintenance of epithelial cell apical/basal polarity [GO:0045199]; midbody abscission [GO:0061952]; mitotic cytokinesis [GO:0000281]; positive regulation of exosomal secretion [GO:1903543]; positive regulation of extracellular exosome assembly [GO:1903553]; protein homooligomerization [GO:0051260]; regulation of centrosome duplication [GO:0010824]; regulation of extracellular exosome assembly [GO:1903551]; regulation of membrane permeability [GO:0090559]; ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway [GO:0090611]; viral budding [GO:0046755]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN010227	Chromosome_4A	15370	7	152	35.18542615484711	0.3204586916862132	59.44671876938345	152	0.5855263157894737	78.08580858085809	30	0.8	55.13290559120073	122	0.5327868852459017	12.342908438061041	25	0	methylated (>=50%)	Q00534	Cyclin-dependent kinase 6 (EC 2.7.11.22) (Cell division protein kinase 6) (Serine/threonine-protein kinase PLSTIRE)	astrocyte development [GO:0014002]; cell dedifferentiation [GO:0043697]; dentate gyrus development [GO:0021542]; DNA damage response [GO:0006974]; G1/S transition of mitotic cell cycle [GO:0000082]; G2/M transition of mitotic cell cycle [GO:0000086]; generation of neurons [GO:0048699]; gliogenesis [GO:0042063]; hemopoiesis [GO:0030097]; lateral ventricle development [GO:0021670]; negative regulation of cell cycle [GO:0045786]; negative regulation of cell differentiation [GO:0045596]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cellular senescence [GO:2000773]; negative regulation of epithelial cell proliferation [GO:0050680]; negative regulation of monocyte differentiation [GO:0045656]; negative regulation of myeloid cell differentiation [GO:0045638]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of cell-matrix adhesion [GO:0001954]; positive regulation of fibroblast proliferation [GO:0048146]; regulation of cell cycle [GO:0051726]; regulation of cell motility [GO:2000145]; regulation of erythrocyte differentiation [GO:0045646]; regulation of gene expression [GO:0010468]; response to virus [GO:0009615]; type B pancreatic cell development [GO:0003323]	hit with GO BP
GN010228	Chromosome_4A	4156	3	111	35.99615014436959	0.8255062380553587	13.453990405582207	111	0.04504504504504504	4.332344213649852	49	0.02040816326530612	18.752154429507065	62	0.06451612903225806	0.3290826820238585	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010229	Chromosome_4A	9970	7	133	36.06820461384152	0.41139550757011667	76.5860400829302	133	0.849624060150376	49.93581514762516	15	0.4666666666666667	79.80173482032218	118	0.8983050847457628	71.94719471947195	39	0.7948717948717948	methylated (>=50%)	Q8BHL8	Proteasome inhibitor PI31 subunit	negative regulation of proteasomal protein catabolic process [GO:1901799]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN010230	Chromosome_4A	12923	14	210	36.03652402692873	0.5015209195742164	86.49033892936332	209	0.9473684210526315	89.48948948948949	26	0.9615384615384616	86.03484447687677	183	0.9453551912568307	52.293577981651374	42	0.6666666666666666	methylated (>=50%)	Q6NS23	tRNA (guanine(10)-N(2))-methyltransferase TRMT11 (EC 2.1.1.214) (tRNA methyltransferase 11 homolog)	NA	hit, no GO BP
GN010231	Chromosome_4A	12300	10	173	30.926829268292682	0.5902536989675623	92.84862932061978	171	1	92.78688524590164	14	1	92.85347043701799	157	1	48.24561403508772	41	0.4634146341463415	methylated (>=50%)	Q6TGY8	ER membrane protein complex subunit 2 (Tetratricopeptide repeat protein 35) (TPR repeat protein 35)	protein insertion into ER membrane by stop-transfer membrane-anchor sequence [GO:0045050]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN010232	Chromosome_4A	3513	6	31	33.731853116994024	0.3142943722943723	61.20894811994288	31	0.6129032258064516	70.25371828521435	17	0.7058823529411765	50.41753653444676	14	0.5	54.93454179254783	37	0.5405405405405406	methylated (>=50%)	Q26630	33 kDa inner dynein arm light chain, axonemal (p33)	NA	hit, no GO BP
GN010233	Chromosome_4A	10375	7	228	35.06506024096385	0.7165593518947095	93.69126174765047	142	1	94.68864468864469	26	1	93.4959349593496	116	1	28.433367243133265	31	0.2903225806451613	methylated (>=50%)	B5X4E0	Calumenin-B	NA	hit, no GO BP
GN010234	Chromosome_4A	10550	9	306	36.843601895734594	0.8547368354164946	1.3168141592920355	291	0	0.5612998522895125	79	0	1.5549348230912476	212	0	0.36821110770174903	53	0	unmethylated (<10%)	Q8INF0	Soluble guanylate cyclase 88E (EC 4.6.1.2)	nitric oxide-cGMP-mediated signaling [GO:0038060]; response to hypoxia [GO:0001666]; response to oxygen levels [GO:0070482]; response to reactive oxygen species [GO:0000302]	hit with GO BP
GN010235	Chromosome_4A	1584	3	60	39.77272727272727	0.9616999747027574	0.6244796003330558	60	0	0.865265760197775	48	0	0.12755102040816327	12	0	0.6160164271047228	51	0	unmethylated (<10%)	Q3SZZ7	Fibrinogen-like protein 1	blood coagulation [GO:0007596]; hepatocyte proliferation [GO:0072574]; negative regulation of T cell activation [GO:0050868]; regulation of immune response [GO:0050776]	hit with GO BP
GN010236	Chromosome_4A	10162	10	133	34.442038968706946	0.4445875	69.18131723956967	133	0.6992481203007519	70.85714285714286	18	0.7222222222222222	68.86040331405346	115	0.6956521739130435	0.5137614678899083	45	0	methylated (>=50%)	G3HKI1	DNA repair protein XRCC4 (X-ray repair cross-complementing protein 4) [Cleaved into: Protein XRCC4, C-terminus (XRCC4/C)]	base-excision repair [GO:0006284]; DNA double-strand break attachment to nuclear envelope [GO:1990683]; double-strand break repair via nonhomologous end joining [GO:0006303]; immunoglobulin V(D)J recombination [GO:0033152]; protein localization to site of double-strand break [GO:1990166]; response to X-ray [GO:0010165]	hit with GO BP
GN010237	Chromosome_4A	3777	2	112	38.813873444532696	0.7878598247809763	0.5041338979632991	112	0	0.4734458624948539	110	0	1.9801980198019802	2	0	0.6103763987792472	47	0	unmethylated (<10%)	Q8SQA4	Adhesion G protein-coupled receptor E5 (Leukocyte antigen CD97) (CD antigen CD97) [Cleaved into: Adhesion G protein-coupled receptor E5 subunit alpha; Adhesion G protein-coupled receptor E5 subunit beta]	cell surface receptor signaling pathway [GO:0007166]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN010238	Chromosome_4A	3790	8	97	34.56464379947229	0.8596395233552201	0.9565563969709048	97	0	1.4719848053181386	43	0	0.5837912087912088	54	0	0.9255962976148095	42	0	unmethylated (<10%)	Q7RYZ9	Thymine-7-hydroxylase (T7H) (THase) (EC 1.14.11.6) (2-oxoglutarate-Fe(II) type oxidoreductase) (Thymine dioxygenase)	NA	hit, no GO BP
GN010239	Chromosome_4A	501	1	11	43.11377245508982	0.48177288224495146	0	11	0	0	11	0	NA	NA	NA	0.69593147751606	49	0	unmethylated (<10%)	Q8CJH3	Plexin-B1	inhibitory synapse assembly [GO:1904862]; negative regulation of cell adhesion [GO:0007162]; negative regulation of osteoblast proliferation [GO:0033689]; neuron projection morphogenesis [GO:0048812]; ossification involved in bone maturation [GO:0043931]; positive regulation of axonogenesis [GO:0050772]; positive regulation of GTPase activity [GO:0043547]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of Rho protein signal transduction [GO:0035025]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; regulation of cytoskeleton organization [GO:0051493]; semaphorin-plexin signaling pathway [GO:0071526]; synapse assembly [GO:0007416]	hit with GO BP
GN010240	Chromosome_4A	27703	16	351	34.776017037865934	0.419065147236789	86.23376623376623	337	0.9673590504451038	90.64430714916152	45	0.9777777777777777	85.7259007063367	292	0.9657534246575342	1.2268188302425107	46	0	methylated (>=50%)	Q5TKA1	Protein lin-9 homolog (HuLin-9) (hLin-9) (Beta subunit-associated regulator of apoptosis) (TUDOR gene similar protein) (Type I interferon receptor beta chain-associated protein) (pRB-associated protein)	DNA-templated transcription [GO:0006351]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell cycle [GO:0051726]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010241	Chromosome_4A	273	1	3	48.35164835164835	0.19975609756097562	0	3	0	0	3	0	NA	NA	NA	0.6091989034419738	74	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010242	Chromosome_4A	1849	6	50	34.93780421849648	0.8902691511387164	0.4548635409377187	50	0	0.45310376076121434	41	0	0.4608294930875576	9	0	0.36319612590799033	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010243	Chromosome_4A	210	1	10	45.23809523809524	1.0769230769230769	0.7215007215007215	10	0	0.7215007215007215	10	0	NA	NA	NA	0.3394762366634336	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010244	Chromosome_4A	11104	18	299	37.9592939481268	0.7475427494277636	0.523054639092299	287	0	0.5865102639296188	82	0	0.4956201014292301	205	0	0.3206997084548105	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010245	Chromosome_4A	876	4	13	38.12785388127854	0.4084648493543759	1.0615711252653928	13	0	1.2779552715654952	9	0	0.6329113924050633	4	0	0.5392289026691831	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010246	Chromosome_4A	813	1	10	64.20664206642067	0.14936067019400354	79.16666666666667	2	1	79.16666666666667	2	1	NA	NA	NA	89.11449520586577	31	0.967741935483871	NA	NA	NA	NA	no Swiss-Prot hit
GN010247	Chromosome_4A	892	2	44	41.36771300448431	1.1567344532861774	0.3342618384401114	44	0	0.29261155815654716	37	0	0.4672897196261682	7	0	1.0050251256281406	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010248	Chromosome_4A	1095	1	18	39.726027397260275	0.4167547680466867	0.45871559633027525	10	0	0.45871559633027525	10	0	NA	NA	NA	0.3184713375796178	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010249	Chromosome_4A	1677	1	40	41.741204531902206	0.5476633682766728	39.24050632911393	11	0.09090909090909091	39.24050632911393	11	0.09090909090909091	NA	NA	NA	1.3723365836041892	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010250	Chromosome_4A	9459	13	144	36.674067026112695	0.4577630742303603	83.88092885375494	144	0.8888888888888888	80.94978165938865	42	0.8333333333333334	84.73818646232439	102	0.9117647058823529	31.733594515181196	24	0.4583333333333333	methylated (>=50%)	Q6T308	1,4-alpha-glucan-branching enzyme (EC 2.4.1.18) (Brancher enzyme) (Glycogen-branching enzyme)	glycogen biosynthetic process [GO:0005978]	hit with GO BP
GN010251	Chromosome_4A	615	1	0	46.17886178861789	0	NA	0	NA	NA	NA	NA	NA	NA	NA	45.37205081669691	8	0.25	NA	NA	NA	NA	no Swiss-Prot hit
GN010252	Chromosome_4A	9856	5	269	35.58238636363637	0.8625446926738175	1.1954228728504763	267	0	0.4803843074459568	23	0	1.2574683896067806	244	0	1.9191506737443855	101	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN010253	Chromosome_4A	1602	5	37	33.458177278402	0.8252788104089219	0.513874614594039	37	0	0.49875311720698257	21	0	0.532319391634981	16	0	0.4598405885959534	50	0	unmethylated (<10%)	Q96EK6	Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine acetylase) (Phosphoglucosamine transacetylase)	UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	hit with GO BP
GN010254	Chromosome_4A	3345	1	89	38.68460388639761	0.7230763625765083	0.3839262861530586	89	0	0.3839262861530586	89	0	NA	NA	NA	1.402688486265342	81	0	unmethylated (<10%)	O75762	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation-sensitive protein p120) (p120) (Wasabi receptor)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; cell surface receptor signaling pathway [GO:0007166]; cellular response to caffeine [GO:0071313]; cellular response to carbon dioxide [GO:0071244]; cellular response to cold [GO:0070417]; cellular response to food [GO:0071240]; cellular response to heat [GO:0034605]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transport [GO:0006811]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of monoatomic anion transport [GO:1903793]; protein homotetramerization [GO:0051289]; regulation of blood circulation [GO:1903522]; regulation of neuronal action potential [GO:0098908]; response to cold [GO:0009409]; sensory perception of pain [GO:0019233]; thermoception [GO:0050955]; ureteric peristalsis [GO:0072105]; urinary bladder smooth muscle contraction [GO:0014832]; vasodilation [GO:0042311]	hit with GO BP
GN010255	Chromosome_4A	678	2	7	46.75516224188791	0.24436206363917207	1.0416666666666667	7	0	1.1494252873563218	6	0	0	1	0	0.928948029123776	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010256	Chromosome_4A	879	1	15	42.54835039817975	0.4236144578313253	0.2557544757033248	15	0	0.2557544757033248	15	0	NA	NA	NA	1.0314875135722041	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010257	Chromosome_4A	9938	4	143	33.03481585832159	0.528687423782813	83.23703649528268	143	0.972027972027972	90.77363896848138	27	1	82.13447350771294	116	0.9655172413793104	35.31882397861779	33	0.3333333333333333	methylated (>=50%)	Q5M9G9	FAST kinase domain-containing protein 4 (Protein TBRG4) (Transforming growth factor beta regulator 4)	mitochondrial mRNA processing [GO:0090615]; mitochondrial RNA processing [GO:0000963]; mRNA metabolic process [GO:0016071]; regulation of mitochondrial mRNA stability [GO:0044528]	hit with GO BP
GN010258	Chromosome_4A	8486	5	108	33.72613716709875	0.4497968157992894	89.68776854769408	107	0.9719626168224299	94.66382070437567	14	1	88.91645988420181	93	0.967741935483871	88.82618510158014	15	1	methylated (>=50%)	Q15404	Ras suppressor protein 1 (RSP-1) (Rsu-1)	cell-matrix adhesion [GO:0007160]; Ras protein signal transduction [GO:0007265]; signal transduction [GO:0007165]	hit with GO BP
GN010259	Chromosome_4A	4292	3	42	36.649580615097854	0.2957756184963131	92.8054298642534	39	1	95.25862068965517	16	1	91.6776750330251	23	1	63.189943036731485	45	0.8	methylated (>=50%)	A7RWD2	Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog	iron-sulfur cluster assembly [GO:0016226]; protein maturation [GO:0051604]	hit with GO BP
GN020026	Chromosome_4A	673	2	15	41.30757800891531	0.5359133620003185	63.2295719844358	15	0.8666666666666667	66.15720524017468	12	1	39.285714285714285	3	0.3333333333333333	76.76263885740195	64	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010260	Chromosome_4A	354	1	10	51.12994350282486	0.43703703703703706	0	4	0	0	4	0	NA	NA	NA	0.6819288845591817	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010261	Chromosome_4A	10558	6	184	34.26785376018185	0.5936535875809803	72.05090170973534	184	0.8206521739130435	83.45679012345678	14	0.9285714285714286	71.28094007833987	170	0.8117647058823529	0.7150153217568948	40	0	methylated (>=50%)	B7K079	Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)	cellular response to oxidative stress [GO:0034599]	hit with GO BP
GN010262	Chromosome_4A	201	1	1	37.81094527363184	0.16488925348646433	64	1	1	64	1	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010263	Chromosome_4A	3631	6	94	35.11429358303498	0.8409772972546777	0.5691399662731872	94	0	0.4294149221685454	45	0	0.6594932315168345	49	0	0.6308200660859117	60	0	unmethylated (<10%)	Q5XJQ7	Protein odd-skipped-related 1 (zOsr1)	angioblast cell differentiation [GO:0035779]; intermediate mesoderm development [GO:0048389]; kidney development [GO:0001822]; mesendoderm development [GO:0048382]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; pattern specification process [GO:0007389]; pectoral fin development [GO:0033339]; podocyte development [GO:0072015]; podocyte differentiation [GO:0072112]; pronephric distal tubule development [GO:0035777]; pronephric glomerulus morphogenesis [GO:0035775]; pronephric nephron tubule epithelial cell differentiation [GO:0035778]; pronephric proximal tubule development [GO:0035776]; pronephros development [GO:0048793]; regulation of endodermal cell differentiation [GO:1903224]; regulation of nodal signaling pathway [GO:1900107]; urogenital system development [GO:0001655]	hit with GO BP
GN010264	Chromosome_4A	36122	21	499	35.562814905044014	0.4408517925729972	73.65618327050325	498	0.857429718875502	93.55295784626284	55	0.9818181818181818	72.05639418968954	443	0.8419864559819413	0.3215434083601286	36	0	methylated (>=50%)	Q6DGE9	Protein unc-45 homolog B (Unc-45B) (UNC45-related protein)	cardiac muscle tissue development [GO:0048738]; lens development in camera-type eye [GO:0002088]; muscle cell development [GO:0055001]; myofibril assembly [GO:0030239]; protein folding [GO:0006457]; skeletal muscle organ development [GO:0060538]; skeletal muscle tissue development [GO:0007519]; striated muscle cell development [GO:0055002]	hit with GO BP
GN010265	Chromosome_4A	10634	8	235	35.029151777318035	0.7272272770394893	0.9797387363369768	235	0	0.7293354943273906	49	0	1.0290363752393108	186	0	0.2805049088359046	21	0	unmethylated (<10%)	B3A0P5	Glycine, glutamate and proline-rich protein	peptidoglycan catabolic process [GO:0009253]	hit with GO BP
GN010266	Chromosome_4A	1176	1	31	40.39115646258504	0.6494459685751951	0.33185840707964603	31	0	0.33185840707964603	31	0	NA	NA	NA	0.521415270018622	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010267	Chromosome_4A	429	1	21	41.95804195804196	1.1189914296360701	1.13314447592068	16	0	1.13314447592068	16	0	NA	NA	NA	0.5143591941705958	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010268	Chromosome_4A	1233	1	32	40.14598540145985	0.6477328692911317	0.9446693657219973	32	0	0.9446693657219973	32	0	NA	NA	NA	0.1597444089456869	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010269	Chromosome_4A	798	1	9	39.9749373433584	0.282311320754717	0.7246376811594203	9	0	0.7246376811594203	9	0	NA	NA	NA	1.0362694300518134	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010270	Chromosome_4A	1557	1	24	38.985228002569045	0.4077250409165303	0.6156552330694811	24	0	0.6156552330694811	24	0	NA	NA	NA	0.8211678832116789	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010271	Chromosome_4A	222	1	8	41.44144144144144	0.8409090909090909	0	8	0	0	8	0	NA	NA	NA	1.4744913005013272	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010272	Chromosome_4A	339	1	11	56.342182890855455	0.40888157894736843	0	4	0	0	4	0	NA	NA	NA	1.6895969104513637	94	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010273	Chromosome_4A	962	2	26	52.80665280665281	0.398058406938808	0.4366812227074236	14	0	0.4366812227074236	14	0	NA	NA	NA	0.8887425938117183	89	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010274	Chromosome_4A	510	1	14	54.11764705882353	0.3814102564102564	4.927536231884058	14	0	4.927536231884058	14	0	NA	NA	NA	0.5175983436853002	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010275	Chromosome_4A	396	1	0	48.484848484848484	0	NA	0	NA	NA	NA	NA	NA	NA	NA	6.62557781201849	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010276	Chromosome_4A	270	1	10	39.25925925925926	0.9782608695652174	1.0033444816053512	10	0	1.0033444816053512	10	0	NA	NA	NA	0.40404040404040403	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010277	Chromosome_4A	1224	1	41	40.68627450980392	0.810989010989011	0.6065200909780136	41	0	0.6065200909780136	41	0	NA	NA	NA	4.515706806282722	39	0	unmethylated (<10%)	Q8IYB1	Nucleotidyltransferase MB21D2 (EC 2.7.7.-) (Mab-21 domain-containing protein 2) (hMB21D2)	NA	hit, no GO BP
GN010278	Chromosome_4A	2522	6	16	33.70340999206979	0.22693120978989517	89.68036529680366	16	1	88.48797250859107	9	1	91.03313840155946	7	1	89.38401048492791	38	1	methylated (>=50%)	A5WVX9	Palmitoyltransferase ZDHHC17 (EC 2.3.1.225) (Acyltransferase ZDHHC17) (EC 2.3.1.-) (DHHC domain-containing cysteine-rich protein 17) (Zinc finger DHHC domain-containing protein 17)	axonogenesis [GO:0007409]; habituation [GO:0046959]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of neurotrophin TRK receptor signaling pathway [GO:0051386]	hit with GO BP
GN010279	Chromosome_4A	10143	9	125	34.240362811791385	0.4214600843269204	88.5514977431268	118	0.9576271186440678	86.97829716193657	20	0.95	88.7719298245614	98	0.9591836734693877	32.42586290714633	24	0.4166666666666667	methylated (>=50%)	E9PTT0	Palmitoyltransferase ZDHHC17 (EC 2.3.1.225) (Acyltransferase ZDHHC17) (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 17)	axonogenesis [GO:0007409]; lipoprotein transport [GO:0042953]; peptidyl-L-cysteine S-palmitoylation [GO:0018230]; protein palmitoylation [GO:0018345]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of modification of synapse structure, modulating synaptic transmission [GO:0098987]; regulation of neurotrophin TRK receptor signaling pathway [GO:0051386]; regulation of programmed cell death [GO:0043067]	hit with GO BP
GN010280	Chromosome_4A	693	1	8	40.4040404040404	0.2857142857142857	84.72803347280335	8	1	84.72803347280335	8	1	NA	NA	NA	92.98000929800094	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010281	Chromosome_4A	590	2	11	37.45762711864407	0.5316186107470511	94.96062992125984	11	1	95.11343804537522	10	1	93.54838709677419	1	1	86.97591436217662	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010282	Chromosome_4A	2025	5	61	38.22222222222222	0.8247921744065703	0.5605864596808969	61	0	0.6988120195667366	42	0	0.33783783783783783	19	0	0.7201390613359822	73	0	unmethylated (<10%)	O95238	SAM pointed domain-containing Ets transcription factor (Prostate epithelium-specific Ets transcription factor) (Prostate-specific Ets) (Prostate-derived Ets factor)	cell differentiation [GO:0030154]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010283	Chromosome_4A	1985	4	68	40.050377833753146	0.8586841736961971	0.65865943432778	68	0	0.7035647279549718	62	0	0.44543429844098	6	0	0.5264616237184816	52	0	unmethylated (<10%)	Q9WTP3	SAM pointed domain-containing Ets transcription factor (Prostate epithelium-specific Ets transcription factor) (Prostate-specific Ets) (Prostate-derived Ets factor)	cell differentiation [GO:0030154]; intestinal epithelial cell development [GO:0060576]; lung goblet cell differentiation [GO:0060480]; negative regulation of cell fate commitment [GO:0010454]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell fate commitment [GO:0010455]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010284	Chromosome_4A	315	1	9	45.714285714285715	0.5472972972972973	1.408450704225352	9	0	1.408450704225352	9	0	NA	NA	NA	0.73370738023306	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010285	Chromosome_4A	31017	17	407	35.42251023632202	0.4239274958438115	83.17124126503855	407	0.9336609336609336	81.19975262832406	34	0.9411764705882353	83.29317269076306	373	0.9329758713136729	43.41957255343082	42	0.38095238095238093	methylated (>=50%)	B2GUP8	Mitochondrial potassium channel ATP-binding subunit (ATP-binding cassette sub-family B member 8, mitochondrial) (ABCB8) (Mitochondrial sulfonylurea-receptor) (MITOSUR)	oligopeptide export from mitochondrion [GO:0090374]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN010286	Chromosome_4A	23975	6	327	34.77372262773723	0.4519871157735494	35.48807606778621	246	0.3902439024390244	28.038897893030793	27	0.3333333333333333	36.72028596961573	219	0.3972602739726027	83.03030303030303	14	0.9285714285714286	sparse (10-50%)	Q5TC84	Opioid growth factor receptor-like protein 1	NA	hit, no GO BP
GN010287	Chromosome_4A	480	1	18	40.416666666666664	0.9781501188724103	0.4088307440719542	18	0	0.4088307440719542	18	0	NA	NA	NA	0.5838760386256456	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010288	Chromosome_4A	348	1	14	41.95402298850575	0.9253561253561253	0.29542097488921715	14	0	0.29542097488921715	14	0	NA	NA	NA	0.4006677796327212	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010289	Chromosome_4A	1342	2	0	46.497764530551414	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010290	Chromosome_4A	1065	1	4	46.85446009389671	0.08018068887634106	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4064697609001406	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010291	Chromosome_4A	345	1	0	48.11594202898551	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.348747591522158	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010292	Chromosome_4A	309	1	1	47.896440129449836	0.06509374341689488	0	1	0	0	1	0	NA	NA	NA	2.28281547241598	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010293	Chromosome_4A	6613	3	22	31.135641917435354	0.1408195226581541	10.54006968641115	22	0.045454545454545456	15.083798882681565	4	0	9.700722394220847	18	0.05555555555555555	30.949105914718018	15	0.2	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010294	Chromosome_4A	684	1	25	41.52046783625731	0.8589511754068716	4.35064935064935	25	0	4.35064935064935	25	0	NA	NA	NA	0.8187967248131007	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010295	Chromosome_4A	762	1	41	42.650918635170605	1.1939922036230222	0.36855036855036855	41	0	0.36855036855036855	41	0	NA	NA	NA	0.8288288288288288	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010296	Chromosome_4A	4542	6	143	36.67987670629679	0.9370217554388597	3.3388429752066116	143	0	2.6815642458100557	77	0	3.863298662704309	66	0	0.6748071979434447	58	0	unmethylated (<10%)	Q6DJN2	TNF receptor-associated factor 6-B (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF6) (RING-type E3 ubiquitin transferase TRAF6-B)	activation of NF-kappaB-inducing kinase activity [GO:0007250]; innate immune response [GO:0045087]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; protein K63-linked ubiquitination [GO:0070534]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]	hit with GO BP
GN010297	Chromosome_4A	612	1	28	39.21568627450981	1.1920695652173914	0.13995801259622112	28	0	0.13995801259622112	28	0	NA	NA	NA	0.39267015706806285	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020681	Chromosome_4A	749	3	8	32.44325767690254	0.407452740378077	0.8771929824561403	8	0	0.8064516129032258	2	0	0.8968609865470852	6	0	2.0813442810769525	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010298	Chromosome_4A	1101	1	18	41.3260672116258	0.40193891209994725	0.8928571428571429	13	0	0.8928571428571429	13	0	NA	NA	NA	0.16556291390728478	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010299	Chromosome_4A	4412	4	170	39.324569356301	0.9969746755352804	0.6886836750665206	170	0	0.963275135460566	43	0	0.5922165820642978	127	0	0.3469545104086353	38	0	unmethylated (<10%)	P48180	Acetylcholine receptor subunit alpha-type acr-16	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010300	Chromosome_4A	10048	6	154	36.74363057324841	0.4557325436363074	91.12884570899838	147	0.9863945578231292	94.05568096313017	24	1	90.59723930572639	123	0.983739837398374	57.15042372881356	54	0.5555555555555556	methylated (>=50%)	Q6AXJ7	Protein FAM199X	NA	hit, no GO BP
GN010301	Chromosome_4A	345	1	3	39.130434782608695	0.2415966386554622	14.285714285714286	1	0	14.285714285714286	1	0	NA	NA	NA	4.434250764525994	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010302	Chromosome_4A	2179	3	53	34.281780633318036	0.8311406980928392	0.5690326445043427	53	0	0.5235602094240838	22	0	0.5927952576379389	31	0	0.3721622627465575	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010303	Chromosome_4A	325	2	8	35.38461538461539	0.7893139040680024	0.5571030640668524	8	0	0.6644518272425249	7	0	0	1	0	0.684931506849315	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010304	Chromosome_4A	3259	4	36	33.69131635471003	0.3907608786157971	2.31023102310231	36	0	3.6105032822757113	20	0	0.995575221238938	16	0	1.874521805661821	57	0	unmethylated (<10%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN010305	Chromosome_4A	3092	4	63	34.605433376455366	0.6812573443008225	0.6687898089171974	63	0	0.755939524838013	19	0	0.6323396567299007	44	0	0.6797583081570997	53	0	unmethylated (<10%)	Q3SZR9	Tetraspanin-3 (Tspan-3)	NA	hit, no GO BP
GN010306	Chromosome_4A	1516	2	37	38.65435356200528	0.6550967018592918	65.89785831960461	37	0.6486486486486487	29.490616621983914	15	0.2	82.04518430439953	22	0.9545454545454546	1.0913140311804008	52	0	methylated (>=50%)	Q1LVN8	Protein adenylyltransferase SelO-1, mitochondrial (EC 2.7.7.108) (Selenoprotein O) (SelO)	NA	hit, no GO BP
GN010307	Chromosome_4A	10462	7	237	34.372012999426495	0.7681105858874866	0.6814684546054078	234	0	0.7226236798221234	39	0	0.675219446320054	195	0	0.7514277126540427	65	0	unmethylated (<10%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN010308	Chromosome_4A	177	1	3	45.19774011299435	0.359026369168357	0	3	0	0	3	0	NA	NA	NA	0.546448087431694	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010309	Chromosome_4A	8686	6	142	34.630439788164864	0.5454341231305332	83.15483753857325	106	0.8679245283018868	87.965260545905707	15	1	82.3304273867744	91	0.8461538461538461	93.19682959048878	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010310	Chromosome_4A	37293	18	512	36.49746601238839	0.4125338275726715	84.61859741048714	445	0.9595505617977528	87.74755743332453	75	0.9333333333333333	84.09312638580931	370	0.9648648648648649	0.6975933031042902	78	0	methylated (>=50%)	Q5T5Y3	Calmodulin-regulated spectrin-associated protein 1	microtubule cytoskeleton organization [GO:0000226]; neuron projection development [GO:0031175]; regulation of microtubule polymerization [GO:0031113]	hit with GO BP
GN010311	Chromosome_4A	1098	1	42	43.442622950819676	0.8520119720651812	0.8515167642362959	42	0	0.8515167642362959	42	0	NA	NA	NA	34.17305585980285	52	0.09615384615384616	unmethylated (<10%)	Q0V9M0	Cartilage acidic protein 1 (ASPIC)	axonal fasciculation [GO:0007413]	hit with GO BP
GN010312	Chromosome_4A	528	1	20	41.47727272727273	0.8808808808808809	0.5	20	0	0.5	20	0	NA	NA	NA	0.8119079837618404	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010313	Chromosome_4A	12140	5	194	34.84349258649094	0.5272371694190084	78.90948916529766	192	0.8645833333333334	70.042194092827	20	0.65	79.61977186311788	172	0.8895348837209303	4.1613041613041615	35	0.05714285714285714	methylated (>=50%)	P09496	Clathrin light chain A (Lca)	chromosome segregation [GO:0007059]; clathrin coat assembly [GO:0048268]; clathrin coat disassembly [GO:0072318]; clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; mitotic cell cycle [GO:0000278]; mitotic spindle organization [GO:0007052]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN010314	Chromosome_4A	7267	9	72	36.43869547268474	0.2984790928751083	61.21802679658953	69	0.7246376811594203	45.656433703461786	27	0.6296296296296297	70.47397047397047	42	0.7857142857142857	31.213389121338913	58	0.27586206896551724	methylated (>=50%)	Q5QJ74	Tubulin-specific chaperone cofactor E-like protein (EL) (Leucine-rich repeat-containing protein 35)	microtubule cytoskeleton organization [GO:0000226]; post-chaperonin tubulin folding pathway [GO:0007023]; tubulin complex assembly [GO:0007021]	hit with GO BP
GN010315	Chromosome_4A	2684	3	26	34.42622950819672	0.32823619610259497	82.69340974212034	26	0.9615384615384616	82.78260869565217	9	1	82.64957264957265	17	0.9411764705882353	22.413793103448278	48	0.3125	methylated (>=50%)	Q8VIK1	U11/U12 small nuclear ribonucleoprotein 25 kDa protein (U11/U12 snRNP 25 kDa protein)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN010316	Chromosome_4A	1098	1	46	41.07468123861567	0.9943694137102808	5.624711848778238	46	0	5.624711848778238	46	0	NA	NA	NA	1.8049288441513363	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010317	Chromosome_4A	1866	3	42	33.11897106109325	0.821027489104928	1.165425704111363	41	0	0.5434782608695652	11	0	1.30074891604257	30	0	2.5717703349282295	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010318	Chromosome_4A	10185	8	242	35.03190967108493	0.7766403844681375	0.43563493792202135	240	0	0.14684287812041116	13	0	0.4506568897036358	227	0	0.40913740197749743	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010319	Chromosome_4A	537	1	21	41.154562383612664	0.9502022244691608	12.053571428571429	21	0	12.053571428571429	21	0	NA	NA	NA	8.33861762840837	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010320	Chromosome_4A	4512	6	54	36.3031914893617	0.3652012033077473	78.23275862068965	48	0.9166666666666666	85.14056224899599	19	1	74.95232040686587	29	0.8620689655172413	14.663310258023914	56	0.125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010321	Chromosome_4A	1014	3	16	35.20710059171598	0.5092918131592165	NA	0	NA	NA	NA	NA	NA	NA	NA	74.67532467532467	18	0.8888888888888888	NA	NA	NA	NA	no Swiss-Prot hit
GN010322	Chromosome_4A	3158	6	42	33.66054464851172	0.47298714080920895	39.6	28	0.5714285714285714	45.97701149425287	11	0.5454545454545454	37.34776725304466	17	0.5882352941176471	38.79423328964614	23	0.391304347826087	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010323	Chromosome_4A	1431	5	51	36.408106219426976	1.0775602409638554	0.45045045045045046	51	0	0.2699055330634278	35	0	0.8130081300813008	16	0	5.352941176470588	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010324	Chromosome_4A	2994	9	89	35.97194388777555	0.9208105549066632	6.923751095530236	89	0	8.498201438848922	36	0	5.427350427350428	53	0	0.36363636363636365	46	0	unmethylated (<10%)	Q96EQ9	Histone-lysine N-methyltransferase PRDM9 (Hybrid sterility protein 1) (Meiosis-induced factor containing a PR/SET domain and zinc-finger motif) (PR domain zinc finger protein 9) (PR domain-containing protein 9) (Protein-lysine N-methyltransferase PRDM9) (EC 2.1.1.-) ([histone H3]-lysine36 N-trimethyltransferase PRDM9) (EC 2.1.1.359) ([histone H3]-lysine4 N-trimethyltransferase PRDM9) (EC 2.1.1.354) ([histone H3]-lysine9 N-trimethyltransferase PRDM9) (EC 2.1.1.355) ([histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.362) ([histone H4]-lysine20 N-methyltransferase PRDM9) (EC 2.1.1.361)	double-strand break repair involved in meiotic recombination [GO:1990918]; female gamete generation [GO:0007292]; homologous chromosome pairing at meiosis [GO:0007129]; male gamete generation [GO:0048232]; meiotic gene conversion [GO:0006311]; negative regulation of apoptotic process [GO:0043066]; positive regulation of fertilization [GO:1905516]; positive regulation of meiosis I [GO:0060903]; positive regulation of reciprocal meiotic recombination [GO:0010845]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; spermatogenesis [GO:0007283]	hit with GO BP
GN010325	Chromosome_4A	7969	6	106	35.29928472832225	0.42727450224635327	92.91372605501944	106	1	93.27433628318585	24	1	92.84362635472218	82	1	88.41743119266054	28	1	methylated (>=50%)	Q7ZVG6	E3 ubiquitin-protein ligase Siah1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SIAH1) (Seven in absentia homolog 1) (Siah-1)	neuron apoptotic process [GO:0051402]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN010326	Chromosome_4A	13454	10	242	38.49412814033001	0.48660482230581725	71.3755632122979	238	0.8445378151260504	67.73109243697479	18	0.8333333333333334	71.52514313306202	220	0.8454545454545455	70.89116143170197	38	0.7631578947368421	methylated (>=50%)	Q6UXI9	Nephronectin (Preosteoblast EGF-like repeat protein with MAM domain) (Protein EGFL6-like)	branching involved in ureteric bud morphogenesis [GO:0001658]; cell-cell adhesion mediated by integrin [GO:0033631]; cell-matrix adhesion [GO:0007160]; cellular response to tumor necrosis factor [GO:0071356]; extracellular matrix organization [GO:0030198]; positive regulation of cell-substrate adhesion [GO:0010811]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of osteoblast differentiation [GO:0045669]; ureteric bud development [GO:0001657]	hit with GO BP
GN010327	Chromosome_4A	14654	14	214	35.04845093489832	0.47647117096256425	71.92751569143552	188	0.8882978723404256	71.64404223227753	44	0.9090909090909091	71.99898592977564	144	0.8819444444444444	79.67086156824782	23	0.9130434782608695	methylated (>=50%)	B3EWY9	Mucin-like protein	cell-matrix adhesion [GO:0007160]	hit with GO BP
GN010328	Chromosome_4A	7096	5	127	36.555806087936865	0.536868323713265	77.78356556843339	126	0.8253968253968254	89.24581005586592	17	0.9411764705882353	76.60491167600172	109	0.8073394495412844	1.2355212355212355	76	0	methylated (>=50%)	Q9UBV8	Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta-EF hand domain-containing protein 1)	COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; positive regulation of protein monoubiquitination [GO:1902527]; response to calcium ion [GO:0051592]	hit with GO BP
GN010329	Chromosome_4A	26687	14	346	34.45872522201821	0.4393890078205583	89.24951948278874	336	0.9642857142857143	89.0909090909091	58	0.9655172413793104	89.2731653448449	278	0.9640287769784173	1.0866997401370186	76	0	methylated (>=50%)	O15118	NPC intracellular cholesterol transporter 1 (Niemann-Pick C1 protein)	autophagy [GO:0006914]; bile acid metabolic process [GO:0008206]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol transport [GO:0030301]; establishment of protein localization to membrane [GO:0090150]; gene expression [GO:0010467]; glycoprotein biosynthetic process [GO:0009101]; intestinal cholesterol absorption [GO:0030299]; intracellular cholesterol transport [GO:0032367]; intracellular lipid transport [GO:0032365]; lysosomal transport [GO:0007041]; lysosome to ER cholesterol transport [GO:0090120]; membrane raft organization [GO:0031579]; negative regulation of epithelial cell apoptotic process [GO:1904036]; negative regulation of TORC1 signaling [GO:1904262]; response to cadmium ion [GO:0046686]; sterol transport [GO:0015918]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN010330	Chromosome_4A	2556	5	39	35.01564945226917	0.4994038255363065	93.80463702014443	39	1	96.09218436873748	17	1	92.40661359461114	22	1	91.09712230215827	16	1	methylated (>=50%)	O15118	NPC intracellular cholesterol transporter 1 (Niemann-Pick C1 protein)	autophagy [GO:0006914]; bile acid metabolic process [GO:0008206]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol transport [GO:0030301]; establishment of protein localization to membrane [GO:0090150]; gene expression [GO:0010467]; glycoprotein biosynthetic process [GO:0009101]; intestinal cholesterol absorption [GO:0030299]; intracellular cholesterol transport [GO:0032367]; intracellular lipid transport [GO:0032365]; lysosomal transport [GO:0007041]; lysosome to ER cholesterol transport [GO:0090120]; membrane raft organization [GO:0031579]; negative regulation of epithelial cell apoptotic process [GO:1904036]; negative regulation of TORC1 signaling [GO:1904262]; response to cadmium ion [GO:0046686]; sterol transport [GO:0015918]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN010331	Chromosome_4A	427	2	7	34.19203747072599	0.5635369532428356	0.6711409395973155	7	0	1	5	0	0	2	0	1.3634426927993182	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010332	Chromosome_4A	1020	1	25	40.19607843137255	0.6105006105006106	0.35545023696682465	25	0	0.35545023696682465	25	0	NA	NA	NA	0.48010973936899864	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010333	Chromosome_4A	2423	2	47	38.71234007428807	0.5236847066830375	0.48484848484848486	47	0	0.5134788189987163	44	0	0	3	0	0.4506760140210315	57	0	unmethylated (<10%)	P16320	120.7 kDa protein in NOF-FB transposable element	NA	hit, no GO BP
GN010334	Chromosome_4A	12026	20	337	36.08847497089639	0.8607011526597185	1.1234071093226023	337	0	0.5569922418937736	111	0	1.344733773804897	226	0	0.6306937631394534	76	0	unmethylated (<10%)	O35604	NPC intracellular cholesterol transporter 1 (Niemann-Pick C1 protein)	adult walking behavior [GO:0007628]; autophagy [GO:0006914]; bile acid metabolic process [GO:0008206]; cellular response to low-density lipoprotein particle stimulus [GO:0071404]; cellular response to steroid hormone stimulus [GO:0071383]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol storage [GO:0010878]; cholesterol transport [GO:0030301]; cyclodextrin metabolic process [GO:2000900]; endocytosis [GO:0006897]; establishment of protein localization to membrane [GO:0090150]; gene expression [GO:0010467]; glycoprotein biosynthetic process [GO:0009101]; intestinal cholesterol absorption [GO:0030299]; intracellular cholesterol transport [GO:0032367]; intracellular lipid transport [GO:0032365]; liver development [GO:0001889]; lysosomal transport [GO:0007041]; lysosome to ER cholesterol transport [GO:0090120]; membrane raft organization [GO:0031579]; negative regulation of epithelial cell apoptotic process [GO:1904036]; negative regulation of macroautophagy [GO:0016242]; negative regulation of TORC1 signaling [GO:1904262]; neurogenesis [GO:0022008]; programmed cell death [GO:0012501]; response to cadmium ion [GO:0046686]; response to xenobiotic stimulus [GO:0009410]; sterol metabolic process [GO:0016125]; sterol transport [GO:0015918]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN010335	Chromosome_4A	7990	8	142	35.431789737171464	0.5689034100709612	25.36778340956855	141	0.2553191489361702	14.80908152734778	49	0.10204081632653061	28.69452121606243	92	0.33695652173913043	0.423728813559322	38	0	sparse (10-50%)	O01369	Cytochrome b-c1 complex subunit 7 (Complex III subunit 7) (Complex III subunit VII) (Ubiquinol-cytochrome c reductase complex 14 kDa protein)	mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]	hit with GO BP
GN010336	Chromosome_4A	537	1	15	40.78212290502793	0.7071992976294995	0.5509641873278237	15	0	0.5509641873278237	15	0	NA	NA	NA	0.6412997007268063	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010337	Chromosome_4A	1071	1	40	41.643323996265174	0.8625792811839323	0.7886435331230284	40	0	0.7886435331230284	40	0	NA	NA	NA	2.307206068268015	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010338	Chromosome_4A	22729	9	366	34.581371815742	0.5390044774850612	82.49503763903974	365	0.9342465753424658	80.19047619047619	8	0.875	82.54125916870416	357	0.9355742296918768	12.278582930756844	43	0.11627906976744186	methylated (>=50%)	Q5MNV8	F-box only protein 47	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN010339	Chromosome_4A	20207	4	324	36.46756074627604	0.483075417862906	75.77956684431341	323	0.7523219814241486	63.69189005768578	58	0.5862068965517241	78.20434279490844	265	0.7886792452830189	89.81233243967829	11	1	methylated (>=50%)	G5ED84	Kelch-like protein 8	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN010340	Chromosome_4A	4341	5	138	35.10711817553559	1.0337711911204372	2.4732163209482563	138	0	1.9002375296912113	27	0	2.654071075123707	111	0	0.6883891693437356	37	0	unmethylated (<10%)	P19217	Sulfotransferase 1E1 (ST1E1) (EC 2.8.2.4) (Estrogen sulfotransferase) (Sulfotransferase, estrogen-preferring)	estrogen metabolic process [GO:0008210]; sulfation [GO:0051923]	hit with GO BP
GN010341	Chromosome_4A	11619	5	266	35.25260349427661	0.7376123457338155	0.8357915437561455	265	0	0.34812880765883375	23	0	0.8786003514401406	242	0	0.711344065892924	43	0	unmethylated (<10%)	Q95JD5	Sulfotransferase 1B1 (ST1B1) (cSULT1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN010342	Chromosome_4A	9383	8	264	36.15048491953533	0.8625261018124765	0.8572552103814393	264	0	0.4589787722317843	27	0	0.9205249726576741	237	0	0.5712109672505712	55	0	unmethylated (<10%)	Q95JD5	Sulfotransferase 1B1 (ST1B1) (cSULT1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN015898	Chromosome_4A	3527	4	28	34.42018712787071	0.26829453826258937	17.083333333333332	27	0	17.272727272727273	18	0	16.74418604651163	9	0	15.107913669064748	19	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010343	Chromosome_4A	627	1	8	39.07496012759171	0.3345338135254102	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1948529411764706	24	0	NA	P50729	Probable ATP-dependent DNA helicase RecS (EC 5.6.2.4) (Probable DNA 3'-5' helicase RecS) (Recombination protein S)	DNA recombination [GO:0006310]	hit with GO BP
GN010344	Chromosome_4A	4969	5	116	34.876232642382774	0.7732607120817794	0.4411001556824079	115	0	0.48971596474045054	21	0	0.42357924461701374	94	0	3.655471784327165	71	0	unmethylated (<10%)	Q95JD5	Sulfotransferase 1B1 (ST1B1) (cSULT1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN010345	Chromosome_4A	702	1	35	52.136752136752136	0.7340244376064291	0.8763388510223953	33	0	0.8763388510223953	33	0	NA	NA	NA	0.8185538881309686	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010346	Chromosome_4A	192	1	15	54.6875	1.131186174391202	0	3	0	0	3	0	NA	NA	NA	1.278810408921933	71	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010347	Chromosome_4A	1068	1	45	41.47940074906367	0.9827015090172985	0.5216095380029806	45	0	0.5216095380029806	45	0	NA	NA	NA	0.6936416184971098	46	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN010348	Chromosome_4A	225	1	2	38.666666666666664	0.2393617021276596	0	2	0	0	2	0	NA	NA	NA	1.2048192771084338	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010349	Chromosome_4A	279	1	3	40.14336917562724	0.28753005839917556	0.6329113924050633	3	0	0.6329113924050633	3	0	NA	NA	NA	0.42598509052183176	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010350	Chromosome_4A	29126	4	630	35.54899402595619	0.6847556998322161	0.8646302787514605	600	0	0.664599025254763	70	0	0.8809300310491732	530	0	0.4106776180698152	45	0	unmethylated (<10%)	Q6R653	UNC5C-like protein (Protein unc-5 homolog C-like) (ZU5 and death domain-containing protein)	positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of JNK cascade [GO:0046330]	hit with GO BP
GN010351	Chromosome_4A	3231	4	81	39.05911482513154	0.657537240871621	0.6880733944954128	34	0	0.47393364928909953	21	0	0.8888888888888888	13	0	1.323379708177808	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010352	Chromosome_4A	594	1	16	41.75084175084175	0.6195567144719687	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010353	Chromosome_4A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010354	Chromosome_4A	1554	4	35	37.12998712998713	0.6556171648987463	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010355	Chromosome_4A	1638	1	95	42.918192918192915	1.2616140487425207	0.799543118218161	95	0	0.799543118218161	95	0	NA	NA	NA	0.4416403785488959	55	0	unmethylated (<10%)	O75901	Ras association domain-containing protein 9 (PAM COOH-terminal interactor protein 1) (P-CIP1) (Peptidylglycine alpha-amidating monooxygenase COOH-terminal interactor)	endosomal transport [GO:0016197]; protein targeting [GO:0006605]; signal transduction [GO:0007165]	hit with GO BP
GN010356	Chromosome_4A	5989	5	177	37.71915177826014	0.8311351169960202	0.7683863885839737	177	0	0.9649122807017544	34	0	0.7366482504604052	143	0	0.5222981116914424	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010357	Chromosome_4A	11594	7	229	35.31999309987925	0.6436557738387885	87.26674769428756	209	0.9617224880382775	83.55481727574751	35	0.9142857142857143	87.81709219275922	174	0.9712643678160919	20.788530465949822	60	0.03333333333333333	methylated (>=50%)	P0CI75	Bifunctional ligase/repressor BirA (Biotin--[acetyl-CoA-carboxylase] ligase) (EC 6.3.4.15) (Biotin--protein ligase) (Biotin-[acetyl-CoA carboxylase] synthetase)	protein lipoylation [GO:0009249]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN010358	Chromosome_4A	12122	7	196	34.35076720013199	0.550031195054166	83.64390854995303	196	0.9132653061224489	84.90990990990991	35	0.8857142857142857	83.4394325209167	161	0.9192546583850931	26.564924987066735	59	0.01694915254237288	methylated (>=50%)	F4I4W2	Biotin--protein ligase 2 (EC 6.3.4.-) (Holocarboxylase synthetase 2)	NA	hit, no GO BP
GN010359	Chromosome_4A	8270	6	135	34.776299879081016	0.5402121655518395	89.7515144022747	135	0.9925925925925926	87.39164696611505	23	1	90.19061583577712	112	0.9910714285714286	73.86363636363636	13	0.7692307692307693	methylated (>=50%)	Q6NRW0	Mdm2-binding protein	protein localization to kinetochore [GO:0034501]; regulation of protein ubiquitination [GO:0031396]; traversing start control point of mitotic cell cycle [GO:0007089]	hit with GO BP
GN010360	Chromosome_4A	483	1	25	43.68530020703934	1.085100647016535	90.24970273483947	25	1	90.24970273483947	25	1	NA	NA	NA	65.59818273599193	61	0.7868852459016393	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010361	Chromosome_4A	18533	13	197	34.21464414827605	0.3658720901101324	78.74827002921728	196	0.8928571428571429	70.14134275618375	19	0.7894736842105263	79.56880579417214	177	0.903954802259887	2.2346368715083798	29	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010362	Chromosome_4A	4419	8	112	35.73206607829826	0.7940318621552679	0.6510416666666666	110	0	0.7387862796833773	36	0	0.6119086843963285	74	0	2.175767918088737	63	0	unmethylated (<10%)	H2A0L3	EGF-like domain containing protein 2	NA	hit, no GO BP
GN010363	Chromosome_4A	6410	8	142	37.06708268330733	0.6523869081109364	1.4560750687591004	142	0	0.6714413607878246	49	0	1.9001773498859893	93	0	0.477516912057302	70	0	unmethylated (<10%)	P86954	EGF-like domain-containing protein 2	NA	hit, no GO BP
GN010364	Chromosome_4A	1188	1	41	37.121212121212125	1.0055741360089185	0.5735140771637122	41	0	0.5735140771637122	41	0	NA	NA	NA	0.8026440037771483	47	0	unmethylated (<10%)	Q9H3Q3	Galactose-3-O-sulfotransferase 2 (Gal3ST-2) (EC 2.8.2.-) (Beta-galactose-3-O-sulfotransferase 2) (Gal-beta-1, 3-GalNAc 3'-sulfotransferase 2) (Glycoprotein beta-Gal 3'-sulfotransferase 2)	glycolipid biosynthetic process [GO:0009247]; glycoprotein biosynthetic process [GO:0009101]	hit with GO BP
GN010365	Chromosome_4A	698	2	14	38.25214899713467	0.565836711059641	0.8221993833504625	14	0	0.6825938566552902	13	0	2.127659574468085	1	0	0.9477124183006536	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010366	Chromosome_4A	219	1	5	47.03196347031963	0.4147727272727273	0	5	0	0	5	0	NA	NA	NA	0.6230529595015576	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010367	Chromosome_4A	999	2	12	34.73473473473474	0.40568527918781727	76.29255989911728	12	1	79.8941798941799	9	1	67.2566371681416	3	1	13.830798479087452	28	0.14285714285714285	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010368	Chromosome_4A	15974	9	169	34.70013772380118	0.35285452612432594	85.07001448575568	154	0.9675324675324676	88.90128276631344	29	1	84.2676944639103	125	0.96	70.64636752136752	40	0.925	methylated (>=50%)	O86938	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	organic phosphonate biosynthetic process [GO:0032923]	hit with GO BP
GN010369	Chromosome_4A	4144	10	30	32.625482625482626	0.2723120899821481	56.64921465968586	30	0.6666666666666666	44.05797101449275	18	0.5555555555555556	71.54285714285714	12	0.8333333333333334	36.99346405228758	22	0.5	methylated (>=50%)	Q9D3W1	Radial spoke head 14 homolog (Rhabdoid tumor deletion region protein 1)	cilium movement [GO:0003341]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; flagellated sperm motility [GO:0030317]; mating [GO:0007618]	hit with GO BP
GN010370	Chromosome_4A	24949	14	307	35.797025932903125	0.3844446862627135	77.1843401607467	303	0.900990099009901	65.50362080315998	28	0.8214285714285714	78.18304626815265	275	0.9090909090909091	26.58450704225352	25	0.28	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010371	Chromosome_4A	8024	6	118	37.799102691924226	0.41209430669260666	77.05521472392638	117	0.8888888888888888	73.85892116182572	10	0.9	77.31036767141437	107	0.8878504672897196	54.17326994189118	69	0.43478260869565216	methylated (>=50%)	Q2YDS5	Sodium channel modifier 1	alternative mRNA splicing, via spliceosome [GO:0000380]; RNA splicing [GO:0008380]	hit with GO BP
GN010372	Chromosome_4A	16078	8	284	35.222042542604804	0.5702781330969368	85.57006816880887	283	0.911660777385159	72.15799614643545	22	0.5454545454545454	86.33588206171957	261	0.9425287356321839	40.70732587513533	46	0.391304347826087	methylated (>=50%)	Q9TRY0	Peptidyl-prolyl cis-trans isomerase FKBP4 (PPIase FKBP4) (EC 5.2.1.8) (52 kDa FK506-binding protein) (52 kDa FKBP) (FKBP-52) (FK506-binding protein 4) (FKBP-4) (HSP-binding immunophilin) (HBI) (Immunophilin FKBP52) (Rotamase) [Cleaved into: Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed]	negative regulation of microtubule polymerization or depolymerization [GO:0031111]; negative regulation of neuron projection development [GO:0010977]; protein folding [GO:0006457]	hit with GO BP
GN010373	Chromosome_4A	3633	2	119	38.81090008257638	0.8718572848877425	0.6734006734006734	116	0	0.5889281507656066	27	0	0.695074040495618	89	0	3.084648493543759	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010374	Chromosome_4A	444	2	14	40.990990990990994	0.7580487804878049	1.056338028169014	14	0	1.1583011583011582	13	0	0	1	0	0.5686433793663688	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010375	Chromosome_4A	652	3	23	42.17791411042945	0.8078000430941608	0.1072961373390558	23	0	0.12091898428053205	21	0	0	2	0	0.5342831700801425	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010376	Chromosome_4A	2414	3	56	32.89146644573322	0.8579134750242745	0.5955926146515783	56	0	0.6756756756756757	19	0	0.5598621877691645	37	0	0.32530904359141183	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010377	Chromosome_4A	585	2	15	41.88034188034188	0.5848440415889096	1.075268817204301	15	0	0.9900990099009901	12	0	1.639344262295082	3	0	0.49641478212906787	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010378	Chromosome_4A	936	1	44	41.98717948717949	1.068604047742605	0.1447178002894356	44	0	0.1447178002894356	44	0	NA	NA	NA	0.7964601769911505	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010379	Chromosome_4A	20391	29	514	38.61017115394046	0.6766694686443205	0.3429551300371535	159	0	0.3859761981344484	145	0	0	14	0	0	10	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN010380	Chromosome_4A	20055	29	501	38.55896285215657	0.6722901419084812	0.5363727790814616	138	0	0.5072181037846274	123	0	0.7142857142857143	15	0	0	10	0	unmethylated (<10%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN010381	Chromosome_4A	14142	8	130	35.55366991938905	0.2916664551371219	44.427316170803145	128	0.4921875	75.36332179930795	42	0.9523809523809523	35.56128520428401	86	0.26744186046511625	41.608876560332874	9	0.2222222222222222	sparse (10-50%)	Q23045	Transcription factor egl-13 (Protein egg laying defective 13)	anatomical structure morphogenesis [GO:0009653]; asymmetric neuroblast division [GO:0055059]; cell fate commitment [GO:0045165]; cell fate specification [GO:0001708]; neuron fate determination [GO:0048664]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; vulval development [GO:0040025]	hit with GO BP
GN010382	Chromosome_4A	318	1	17	44.65408805031446	1.0732578916021442	0.546448087431694	17	0	0.546448087431694	17	0	NA	NA	NA	0.3749531308586427	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010383	Chromosome_4A	12158	10	245	36.51093929922685	0.6053698013201964	87.23203026481715	241	0.921161825726141	69.1723614274867	28	0.7142857142857143	88.86749639001582	213	0.9483568075117371	0.8212749315604224	64	0	methylated (>=50%)	Q6P877	Proteasomal ubiquitin receptor ADRM1	proteasome assembly [GO:0043248]	hit with GO BP
GN010384	Chromosome_4A	3535	4	99	35.134370579915135	0.90801886792452835	0.4608294930875576	98	0	0.1342281879194631	30	0	0.5621486570893192	68	0	0.46107946840249525	39	0	unmethylated (<10%)	Q8BYH0	Dorsal root ganglia homeobox protein (Dorsal root ganglion 11) (Homeobox protein DRG11) (Paired-related homeobox protein-like 1)	axon guidance [GO:0007411]; axonogenesis [GO:0007409]; detection of chemical stimulus [GO:0009593]; detection of temperature stimulus [GO:0016048]; dorsal spinal cord development [GO:0021516]; nervous system development [GO:0007399]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron migration [GO:0001764]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory perception of mechanical stimulus [GO:0050954]; trigeminal nerve development [GO:0021559]	hit with GO BP
GN010385	Chromosome_4A	318	2	10	42.76729559748428	0.6883116883116883	0.5025125628140703	10	0	0.6006006006006006	9	0	0	1	0	0.5949161709031909	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010386	Chromosome_4A	345	1	3	40.289855072463766	0.2161654135338346	45.714285714285715	3	0.6666666666666666	45.714285714285715	3	0.6666666666666666	NA	NA	NA	38.80597014925373	10	0.2	NA	NA	NA	NA	no Swiss-Prot hit
GN010387	Chromosome_4A	821	4	6	36.662606577344704	0.22081764389456698	47.945205479452056	6	0.3333333333333333	47.945205479452056	6	0.3333333333333333	NA	NA	NA	1.2553942722636329	28	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010388	Chromosome_4A	438	1	17	48.17351598173516	0.6690026954177898	28.900255754475705	17	0	28.900255754475705	17	0	NA	NA	NA	68.61607142857143	74	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010389	Chromosome_4A	1805	3	22	38.06094182825485	0.33841250362189157	95.35714285714286	22	1	95.40229885057471	12	1	95.28301886792453	10	1	89.16849015317287	9	1	methylated (>=50%)	Q9VE51	Cleavage and polyadenylation specificity factor 73 (EC 3.1.27.-)	co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway [GO:0180010]; mRNA 3'-end processing by stem-loop binding and cleavage [GO:0006398]; nuclear histone mRNA catabolic process [GO:0071045]	hit with GO BP
GN010390	Chromosome_4A	18696	14	280	35.932819854514335	0.4688266982461002	88.06328860404567	237	0.9704641350210971	86.75534991324464	31	0.9354838709677419	88.23396226415095	206	0.9757281553398058	47.84313725490196	37	0.5405405405405406	methylated (>=50%)	P79101	Cleavage and polyadenylation specificity factor subunit 3 (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit) (CPSF 73 kDa subunit) (mRNA 3'-end-processing endonuclease CPSF-73)	mRNA 3'-end processing [GO:0031124]; mRNA 3'-end processing by stem-loop binding and cleavage [GO:0006398]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN010391	Chromosome_4A	13804	8	203	35.931614024920314	0.45564133820939995	80.83386513507764	203	0.9359605911330049	65.39842067480258	24	0.7083333333333334	82.5255704169945	179	0.9664804469273743	18.225918225918225	22	0.36363636363636365	methylated (>=50%)	Q2KI15	Peptide chain release factor 1-like, mitochondrial (Mitochondrial translational release factor 1-like)	mitochondrial translational termination [GO:0070126]	hit with GO BP
GN010392	Chromosome_4A	4927	6	50	34.66612543129693	0.33778966131907306	84.56495828367103	50	1	89.26123381568927	20	1	81.54674498286833	30	1	92.04081632653062	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010393	Chromosome_4A	5901	4	193	36.21420098288426	0.9978805094487747	1.720040737806948	192	0	0.5106926268751995	71	0	2.3842917251051894	121	0	0.5689900426742532	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010394	Chromosome_4A	3442	4	128	39.33759442184776	0.9614357291248407	1.6475495307612096	120	0	0.7466973004020678	37	0	2.161100196463654	83	0	2.626770214709913	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010395	Chromosome_4A	5629	5	169	41.037484455498316	0.7226885840697208	1.057668093679174	124	0	0.4914004914004914	16	0	1.2036743744060818	108	0	2.7159915710606417	54	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN010396	Chromosome_4A	1244	4	27	31.028938906752412	0.907955559159841	0.5952380952380952	27	0	0.477326968973747	20	0	0.8460236886632826	7	0	0.602928509905254	69	0	unmethylated (<10%)	A5HNF6	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN010397	Chromosome_4A	14469	10	389	34.936761351855694	0.883415687969631	0.9779857329140139	385	0	0.8710801393728222	61	0	0.9912084123426995	324	0	0.45330915684496825	42	0	unmethylated (<10%)	B3A0P5	Glycine, glutamate and proline-rich protein	peptidoglycan catabolic process [GO:0009253]	hit with GO BP
GN010398	Chromosome_4A	1786	4	25	35.55431131019037	0.46590007930214117	71.64393395549175	25	0.72	81.50851581508516	15	0.8	57.443082311733804	10	0.6	51.67883211678832	29	0.41379310344827586	methylated (>=50%)	P50411	Protein phosphatase inhibitor 2 (IPP-2)	intracellular signal transduction [GO:0035556]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN010399	Chromosome_4A	2034	1	50	42.47787610619469	0.5494238342976613	88.48484848484848	50	0.96	88.48484848484848	50	0.96	NA	NA	NA	81.76	18	1	methylated (>=50%)	Q5R5X9	Protein-lysine N-methyltransferase SMYD4 (EC 2.1.1.-) (SET and MYND domain-containing protein 4)	heart development [GO:0007507]	hit with GO BP
GN010400	Chromosome_4A	1380	1	20	41.08695652173913	0.3533207025449332	87.85046728971963	20	1	87.85046728971963	20	1	NA	NA	NA	15.319747013352073	27	0.1111111111111111	methylated (>=50%)	Q9SAJ7	Metal tolerance protein 9 (AtMTP9)	NA	hit, no GO BP
GN010401	Chromosome_4A	19407	8	237	34.13716700159736	0.4286108467700001	75.62464508801817	237	0.8438818565400844	63.41780376868096	29	0.7586206896551724	77.1216830026297	208	0.8557692307692307	4.4296788482834994	20	0	methylated (>=50%)	Q01459	Di-N-acetylchitobiase (EC 3.2.1.-)	carbohydrate catabolic process [GO:0016052]; chitin catabolic process [GO:0006032]; oligosaccharide catabolic process [GO:0009313]	hit with GO BP
GN010402	Chromosome_4A	45092	41	579	35.908808657855054	0.40144690385639087	89.68415133243775	549	0.9581056466302368	89.72940648826432	132	0.9393939393939394	89.67219589257503	417	0.9640287769784173	1.3996500874781306	99	0	methylated (>=50%)	Q9Y6J0	Calcineurin-binding protein cabin-1 (Calcineurin inhibitor) (CAIN)	cell surface receptor signaling pathway [GO:0007166]; chromatin organization [GO:0006325]; DNA replication-dependent chromatin assembly [GO:0006335]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nucleosome assembly [GO:0006334]; regulation of chromatin organization [GO:1902275]	hit with GO BP
GN010403	Chromosome_4A	50725	13	661	35.51306062099557	0.41509108228680736	51.78388746803069	587	0.5587734241908007	68.55509355509355	90	0.7444444444444445	49.43132108486439	497	0.5251509054325956	47.715053763440864	15	0.3333333333333333	methylated (>=50%)	Q8BGB5	LIM domain-containing protein 2	NA	hit, no GO BP
GN010404	Chromosome_4A	429	1	11	42.42424242424242	0.5836734693877551	91.86046511627907	11	1	91.86046511627907	11	1	NA	NA	NA	56.432432432432435	21	0.6190476190476191	methylated (>=50%)	P83876	Thioredoxin-like protein 4A (DIM1 protein homolog) (Spliceosomal U5 snRNP-specific 15 kDa protein) (Thioredoxin-like U5 snRNP protein U5-15kD)	mRNA splicing, via spliceosome [GO:0000398]; RNA splicing, via transesterification reactions [GO:0000375]; spliceosomal complex assembly [GO:0000245]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN010405	Chromosome_4A	573	1	26	42.23385689354276	1.0313603322949116	2.576112412177986	20	0	2.576112412177986	20	0	NA	NA	NA	0.4158004158004158	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010406	Chromosome_4A	888	3	31	40.427927927927925	0.8567693744164332	0.5882352941176471	31	0	0.6112469437652812	20	0	0.5535055350553506	11	0	0.5451936872309899	64	0	unmethylated (<10%)	A8QMS7	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN010407	Chromosome_4A	1775	2	61	39.436619718309856	0.887711013273647	0.6535947712418301	61	0	0.7178750897343862	40	0	0.5340453938584779	21	0	5.637982195845697	77	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010408	Chromosome_4A	8368	6	264	36.40057361376673	0.9534009342599977	2.41280458671763	263	0	3.5129604365620737	97	0	2.077706212341575	166	0	1.763668430335097	51	0	unmethylated (<10%)	C8BKC7	Myeloid differentiation primary response protein MyD88	defense response to Gram-positive bacterium [GO:0050830]; defense response to virus [GO:0051607]; innate immune response [GO:0045087]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; Toll signaling pathway [GO:0008063]; toll-like receptor 4 signaling pathway [GO:0034142]; toll-like receptor 8 signaling pathway [GO:0034158]	hit with GO BP
GN010409	Chromosome_4A	14377	16	333	35.68199207066843	0.7276942163131003	0.9260763606823721	329	0	0.5315822388993121	62	0	1.008711600183402	267	0	2.73838630806846	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010410	Chromosome_4A	14066	8	235	35.34053746623063	0.5365268936233757	85.55750067330999	232	0.9094827586206896	79.60381511371973	30	0.8666666666666667	86.15909259396545	202	0.9158415841584159	6.920835356969403	59	0	methylated (>=50%)	Q5RDB4	Nuclear envelope integral membrane protein 1	erythrocyte enucleation [GO:0043131]; erythrocyte maturation [GO:0043249]	hit with GO BP
GN010411	Chromosome_4A	336	1	10	42.55952380952381	0.6572769953051644	51.038575667655785	10	0.6	51.038575667655785	10	0.6	NA	NA	NA	73.91304347826087	12	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010412	Chromosome_4A	2708	8	59	35.00738552437223	0.7112769168443687	0.45415838773772355	59	0	0.3694581280788177	16	0	0.47952784950202876	43	0	0.5884516366311143	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010413	Chromosome_4A	21790	11	399	34.364387333639286	0.6340711129969259	71.87723054960742	394	0.9060913705583756	58.84499785315586	52	0.8461538461538461	74.32863546420062	342	0.9152046783625731	90.56742815033161	32	1	methylated (>=50%)	E9Q4F2	Kelch-like protein 18	positive regulation of mitotic cell cycle phase transition [GO:1901992]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN010414	Chromosome_4A	9299	11	267	35.98236369502097	0.8870666416570647	0.7454739084132055	266	0	0.5651105651105651	116	0	0.8356888288066855	150	0	0.7413868294810292	47	0	unmethylated (<10%)	Q9D4B2	Outer dynein arm-docking complex subunit 4 (Tetratricopeptide repeat protein 25) (TPR repeat protein 25)	brain development [GO:0007420]; cerebrospinal fluid circulation [GO:0090660]; cilium movement [GO:0003341]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; heart development [GO:0007507]; lung development [GO:0030324]; mucociliary clearance [GO:0120197]; outer dynein arm assembly [GO:0036158]; protein localization to motile cilium [GO:0120229]	hit with GO BP
GN010415	Chromosome_4A	32347	19	470	35.17173153615482	0.46983020635260575	87.49122646403613	467	0.987152034261242	90.72593540134314	59	0.9830508474576272	87.14998987922543	408	0.9877450980392157	0.33967391304347827	59	0	methylated (>=50%)	F6RIX4	DNA helicase MCM9 (EC 5.6.2.4) (DNA 3'-5' helicase MCM9) (Minichromosome maintenance 9)	DNA damage response [GO:0006974]; double-strand break repair via homologous recombination [GO:0000724]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN010416	Chromosome_4A	3381	6	132	40.04732327713694	0.9750668554349536	0.3616636528028933	131	0	0.3889969435954432	98	0	0.29027576197387517	33	0	14.422616195495927	25	0.2	unmethylated (<10%)	Q90593	Endoplasmic reticulum chaperone BiP (EC 3.6.4.10) (78 kDa glucose-regulated protein) (GRP-78) (Binding-immunoglobulin protein) (BiP) (Heat shock protein 70 family protein 5) (HSP70 family protein 5) (Heat shock protein family A member 5) (Immunoglobulin heavy chain-binding protein)	cellular response to glucose starvation [GO:0042149]; cerebellar Purkinje cell layer development [GO:0021680]; cerebellum structural organization [GO:0021589]; endoplasmic reticulum unfolded protein response [GO:0030968]; IRE1-mediated unfolded protein response [GO:0036498]; maintenance of protein localization in endoplasmic reticulum [GO:0035437]; negative regulation of apoptotic process [GO:0043066]; negative regulation of IRE1-mediated unfolded protein response [GO:1903895]; negative regulation of PERK-mediated unfolded protein response [GO:1903898]; negative regulation of protein-containing complex assembly [GO:0031333]; positive regulation of cell migration [GO:0030335]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein ubiquitination [GO:0031398]; post-translational protein targeting to membrane, translocation [GO:0031204]; protein refolding [GO:0042026]	hit with GO BP
GN010417	Chromosome_4A	11607	4	368	34.22934436116137	1.086142790665741	2.6651216685979144	360	0	0.6501950585175552	37	0	2.9950319375443577	323	0	0.45425048669695	56	0	unmethylated (<10%)	Q96A58	Ras-related and estrogen-regulated growth inhibitor (EC 3.6.5.2)	establishment or maintenance of cell polarity [GO:0007163]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN010418	Chromosome_4A	9103	6	217	35.26310007689773	0.767824054548967	1.4425116673737803	217	0	0.8849557522123894	28	0	1.5219077161690577	189	0	0.9395184967704052	27	0	unmethylated (<10%)	Q3T0Y3	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN010419	Chromosome_4A	492	1	18	49.59349593495935	0.5975708502024292	3.7790697674418605	18	0	3.7790697674418605	18	0	NA	NA	NA	1.5174506828528074	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010420	Chromosome_4A	3625	4	73	35.03448275862069	0.6566377171215881	0.6791171477079796	73	0	0.34324942791762014	17	0	0.7694675284702985	56	0	0.9412650602409639	47	0	unmethylated (<10%)	Q8JG30	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase family cytosolic 1B member 1)	sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]	hit with GO BP
GN010421	Chromosome_4A	1522	3	25	32.65440210249672	0.6162941367022999	0.6836544437538844	25	0	0.8565310492505354	17	0	0.4444444444444444	8	0	1.0428736964078795	20	0	unmethylated (<10%)	P49887	Sulfotransferase 1E1 (ST1E1) (EC 2.8.2.4) (Estrogen sulfotransferase) (ST1E3) (Sulfotransferase, estrogen-preferring)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; estrogen catabolic process [GO:0006711]; estrogen metabolic process [GO:0008210]; ethanol catabolic process [GO:0006068]; positive regulation of fat cell differentiation [GO:0045600]; sulfation [GO:0051923]	hit with GO BP
GN010422	Chromosome_4A	761	2	15	37.187910643889616	0.5770397330906885	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010423	Chromosome_4A	10818	5	115	34.66444814198558	0.35451417335736524	86.89639006094703	88	0.9204545454545454	92.42761692650335	11	1	86.24574272989258	77	0.9090909090909091	NA	NA	NA	methylated (>=50%)	Q8BVF7	Gamma-secretase subunit APH-1A (APH-1a) (Aph-1alpha)	amyloid precursor protein catabolic process [GO:0042987]; amyloid precursor protein metabolic process [GO:0042982]; amyloid-beta formation [GO:0034205]; membrane protein ectodomain proteolysis [GO:0006509]; membrane protein intracellular domain proteolysis [GO:0031293]; metanephros development [GO:0001656]; Notch receptor processing [GO:0007220]; Notch signaling pathway [GO:0007219]; protein processing [GO:0016485]	hit with GO BP
GN010424	Chromosome_4A	14320	12	213	36.347765363128495	0.4506713616771542	83.1597326750557	213	0.9483568075117371	93.96903015484922	53	1	81.28576474743907	160	0.93125	94.72241261137765	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010425	Chromosome_4A	348	1	14	45.40229885057471	0.8838896952104499	98	14	1	98	14	1	NA	NA	NA	93.1384015594542	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010426	Chromosome_4A	204	1	3	52.450980392156865	0.2833333333333333	100	3	1	100	3	1	NA	NA	NA	92.85999202233745	31	1	NA	NA	NA	NA	no Swiss-Prot hit
GN010427	Chromosome_4A	18576	24	290	35.26055124892334	0.5047701218785442	90.54171125719819	290	0.9655172413793104	93.43661971830986	67	0.9850746268656716	89.90232066197972	223	0.9596412556053812	89.13282107574095	19	0.9473684210526315	methylated (>=50%)	Q5R405	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit)	regulation of DNA-templated transcription elongation [GO:0032784]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN010428	Chromosome_4A	22889	10	665	36.90418978548648	0.8533097093703155	0.6511048001662395	651	0	0.3466204506065858	22	0	0.6637806637806638	629	0	0.3235082674335011	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010429	Chromosome_4A	18441	16	247	36.54357138983786	0.40144283776602074	75.42556742323097	235	0.8297872340425532	66.79046734757041	93	0.7204301075268817	78.61304695532961	142	0.9014084507042254	52.96442687747036	18	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010430	Chromosome_4A	56209	40	643	33.800636908680104	0.4015434492979553	80.78374008776657	226	0.9380530973451328	85.82995951417004	49	1	79.44898753894081	177	0.9209039548022598	53.41692789968652	25	0.72	methylated (>=50%)	Q8CDK2	Cytosolic carboxypeptidase 2 (EC 3.4.17.-) (ATP/GTP-binding protein-like 2) (Protein deglutamylase CCP2)	protein side chain deglutamylation [GO:0035610]; proteolysis [GO:0006508]	hit with GO BP
GN010431	Chromosome_4A	9798	8	265	37.2627066748316	0.7861672925193797	0.6084604983581224	207	0	0.3856041131105398	44	0	0.6478745169356672	163	0	0.7323026851098454	46	0	unmethylated (<10%)	Q28J59	Protein FAM221A	NA	hit, no GO BP
GN010432	Chromosome_4A	30385	9	843	36.57725851571499	0.8308181308651298	1.1282322328833956	836	0	1.4390371533228676	113	0	1.102049812651532	723	0	0.7656967840735069	47	0	unmethylated (<10%)	Q1ZZH1	Metabotropic glutamate receptor 3 (mGluR3)	G protein-coupled glutamate receptor signaling pathway [GO:0007216]	hit with GO BP
GN010433	Chromosome_4A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010434	Chromosome_4A	648	2	21	42.129629629629626	0.7411764705882353	0.2592352559948153	21	0	0.2682763246143528	20	0	0	1	0	0.5172819186456619	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016540	Chromosome_4A	298	1	13	45.30201342281879	0.8540564373897708	0	11	0	0	11	0	NA	NA	NA	2.009550338241146	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010435	Chromosome_4A	47431	25	920	35.674980497986546	0.6109943679021023	35.71353343865192	896	0.31138392857142855	30.10351966873706	95	0.28421052631578947	36.348927189588466	801	0.3146067415730337	0.29455081001472755	40	0	sparse (10-50%)	Q6PFM4	Endoplasmic reticulum junction formation protein lunapark-B (ER junction formation factor lunapark)	endoplasmic reticulum tubular network maintenance [GO:0071788]; endoplasmic reticulum tubular network organization [GO:0071786]; positive regulation of endoplasmic reticulum tubular network organization [GO:1903373]	hit with GO BP
GN010436	Chromosome_4A	11574	9	116	32.2706065318818	0.3868823812828073	78.83211678832117	116	0.9568965517241379	81.50134048257372	20	1	78.32310838445808	96	0.9479166666666666	79.14438502673796	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010437	Chromosome_4A	11858	9	127	34.002361275088546	0.37236062432390665	84.82538121003444	127	0.968503937007874	90.61624649859944	10	1	84.26799676462659	117	0.9658119658119658	89.8727172108467	21	0.9523809523809523	methylated (>=50%)	Q3ZBL4	Leucine zipper transcription factor-like protein 1	flagellated sperm motility [GO:0030317]; negative regulation of protein localization to ciliary membrane [GO:1903568]; negative regulation of protein localization to cilium [GO:1903565]	hit with GO BP
GN010438	Chromosome_4A	3860	4	51	34.97409326424871	0.4359852855519801	87.5545216632742	51	0.9607843137254902	86.40522875816994	11	1	87.88332086761406	40	0.95	22.340846184262553	50	0.28	methylated (>=50%)	Q28I29	tRNA-uridine aminocarboxypropyltransferase 1 (EC 2.5.1.25) (DTW domain-containing protein 1)	tRNA modification [GO:0006400]	hit with GO BP
GN010439	Chromosome_4A	279	1	0	48.38709677419355	0	NA	0	NA	NA	NA	NA	NA	NA	NA	58.88594164456234	7	0.7142857142857143	NA	NA	NA	NA	no Swiss-Prot hit
GN010440	Chromosome_4A	252	1	0	48.01587301587302	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010441	Chromosome_4A	1233	1	37	43.876723438767236	0.6239707853489072	85.89360430364614	37	1	85.89360430364614	37	1	NA	NA	NA	44.68775344687754	21	0.47619047619047616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010442	Chromosome_4A	1392	1	38	45.9051724137931	0.518974922491268	89.26480156148341	38	1	89.26480156148341	38	1	NA	NA	NA	49.08616187989556	18	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010443	Chromosome_4A	4593	3	149	40.77944698454169	0.7832627162291153	2.5311878502983185	149	0	1.8518518518518519	14	0	2.5966303270564914	135	0	13.96551724137931	36	0.05555555555555555	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010444	Chromosome_4A	16200	11	200	35.17283950617284	0.4018366913362149	84.49862975194996	198	0.9393939393939394	84.13068844807468	17	0.8823529411764706	84.52220726783311	181	0.9447513812154696	0.6711409395973155	15	0	methylated (>=50%)	P48643	T-complex protein 1 subunit epsilon (TCP-1-epsilon) (EC 3.6.1.-) (CCT-epsilon) (Chaperonin containing T-complex polypeptide 1 subunit 5)	positive regulation of protein localization to Cajal body [GO:1904871]; positive regulation of telomerase RNA localization to Cajal body [GO:1904874]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein folding [GO:0006457]; protein stabilization [GO:0050821]; response to virus [GO:0009615]	hit with GO BP
GN010445	Chromosome_4A	1993	3	58	35.925740090316104	0.9027748490741392	75.08408071748879	58	0.7068965517241379	66.93227091633466	12	0.4166666666666667	76.4187866927593	46	0.782608695652174	21.05263157894737	1	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010446	Chromosome_4A	24079	37	395	37.01980979276548	0.4818008965629558	90.39506031673432	333	0.993993993993994	90.1656586905075	69	1	90.45879602571596	264	0.9924242424242424	8.96551724137931	47	0.10638297872340426	methylated (>=50%)	Q7Z4L5	Tetratricopeptide repeat protein 21B (TPR repeat protein 21B) (Intraflagellar transport 139 homolog)	cilium assembly [GO:0060271]; intraciliary retrograde transport [GO:0035721]; protein localization to cilium [GO:0061512]; regulation of intraciliary retrograde transport [GO:1905799]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010447	Chromosome_4A	23060	28	517	34.01561144839549	0.7750810495341752	0.7944604160870506	514	0	0.7138722747443565	94	0	0.8098358241920047	420	0	0.583554376657825	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010448	Chromosome_4A	693	1	24	43.001443001443	0.7494592645998558	0.36101083032490977	24	0	0.36101083032490977	24	0	NA	NA	NA	0.6617038875103392	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010449	Chromosome_4A	45540	10	538	34.78919631093544	0.3915699996749239	63.87381058816016	501	0.6926147704590818	80.99565389174239	48	0.8958333333333334	62.368430194184874	453	0.6710816777041942	17.794486215538846	51	0.29411764705882354	methylated (>=50%)	P08621	U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (U1-70K) (snRNP70)	cellular response to retinoic acid [GO:0071300]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to tumor necrosis factor [GO:0071356]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of chaperone-mediated autophagy [GO:1904715]; negative regulation of protein refolding [GO:0061084]; regulation of RNA splicing [GO:0043484]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN010450	Chromosome_4A	1542	1	28	38.326848249027236	0.49564917919871426	77.32644017725258	28	0.9285714285714286	77.32644017725258	28	0.9285714285714286	NA	NA	NA	9.464285714285714	57	0.14035087719298245	methylated (>=50%)	P08510	Potassium voltage-gated channel protein Shaker (Protein minisleep)	action potential [GO:0001508]; axon extension [GO:0048675]; behavioral response to ether [GO:0048150]; cellular response to dopamine [GO:1903351]; courtship behavior [GO:0007619]; detection of visible light [GO:0009584]; larval locomotory behavior [GO:0008345]; learning or memory [GO:0007611]; mating behavior, sex discrimination [GO:0048047]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; positive regulation of membrane potential [GO:0045838]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; proboscis extension reflex [GO:0007637]; protein homooligomerization [GO:0051260]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic activity [GO:0060025]; sensory perception of taste [GO:0050909]; sleep [GO:0030431]	hit with GO BP
GN010451	Chromosome_4A	8188	5	99	34.110893991206645	0.4156536988324334	75.08242234947076	99	0.8686868686868687	51.291079812206576	12	0.5833333333333334	79.20993687639992	87	0.9080459770114943	61.0546875	36	0.6666666666666666	methylated (>=50%)	Q4V7T8	Ropporin-1-like protein	flagellated sperm motility [GO:0030317]; sperm capacitation [GO:0048240]	hit with GO BP
GN010452	Chromosome_4A	1431	3	39	36.477987421383645	0.8241018295654229	69.51165860096788	35	0.9142857142857143	64.8960739030023	12	0.8333333333333334	70.59782608695652	23	0.9565217391304348	74.76007677543186	25	0.88	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010453	Chromosome_4A	795	1	32	42.893081761006286	0.8879581151832461	0.7858546168958742	32	0	0.7858546168958742	32	0	NA	NA	NA	0.4087699739873653	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010454	Chromosome_4A	795	1	30	42.38993710691824	0.8566810344827587	0.6218905472636815	27	0	0.6218905472636815	27	0	NA	NA	NA	0.7761966364812419	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010455	Chromosome_4A	17506	10	484	35.8334285387867	0.862791308651228	0.8306027585155833	483	0	0.5564142194744977	48	0	0.8691495371778715	435	0	0.46511627906976744	57	0	unmethylated (<10%)	Q28824	Myosin light chain kinase, smooth muscle (MLCK) (smMLCK) (EC 2.7.11.18) (Telokin) [Cleaved into: Myosin light chain kinase, smooth muscle, deglutamylated form]	positive regulation of vascular associated smooth muscle contraction [GO:1904695]; tonic smooth muscle contraction [GO:0014820]	hit with GO BP
GN017638	Chromosome_4A	852	2	23	41.78403755868545	0.6263904871499808	0.14925373134328357	22	0	0.1953125	17	0	0	5	0	0.4059539918809202	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010456	Chromosome_4A	756	1	15	43.51851851851852	0.43719639139486466	0.946969696969697	15	0	0.946969696969697	15	0	NA	NA	NA	18.076644974692698	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010457	Chromosome_4A	660	1	3	51.21212121212121	0.08934614863950183	0.9615384615384616	3	0	0.9615384615384616	3	0	NA	NA	NA	0.6790123456790124	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010458	Chromosome_4A	558	1	27	42.29390681003584	1.0848214285714286	0	18	0	0	18	0	NA	NA	NA	0.33222591362126247	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010459	Chromosome_4A	20662	13	437	36.6179459878037	0.635738268831716	85.35498489425981	435	0.9402298850574713	94.87870619946092	33	1	84.63756345177664	402	0.9353233830845771	33.26941514860978	48	0.3125	methylated (>=50%)	Q922J9	Fatty acyl-CoA reductase 1 (Far1) (EC 1.2.1.84)	ether lipid biosynthetic process [GO:0008611]; glycerophospholipid biosynthetic process [GO:0046474]; long-chain fatty-acyl-CoA metabolic process [GO:0035336]; wax biosynthetic process [GO:0010025]	hit with GO BP
GN003408	Chromosome_4A	319	1	5	40.75235109717868	0.37832068311195444	1.36986301369863	5	0	1.36986301369863	5	0	NA	NA	NA	1.1692307692307693	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010460	Chromosome_4A	543	1	13	39.59484346224678	0.6138260869565217	3.2110091743119265	13	0	3.2110091743119265	13	0	NA	NA	NA	0.5907626208378088	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010461	Chromosome_4A	585	1	16	39.31623931623932	0.7169117647058824	0.6060606060606061	16	0	0.6060606060606061	16	0	NA	NA	NA	0.5807622504537205	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010462	Chromosome_4A	1083	1	43	39.981532779316716	0.9993347639484979	0.7994670219853431	43	0	0.7994670219853431	43	0	NA	NA	NA	0.5927180355630821	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010463	Chromosome_4A	1635	1	1	30.642201834862384	0.03006730663135827	0	1	0	0	1	0	NA	NA	NA	1.9758874748827864	72	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010464	Chromosome_4A	1912	4	55	47.64644351464435	0.5068440331598226	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7068607068607069	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010465	Chromosome_4A	5467	4	167	37.90012804097311	0.85166884328358206	5.324535829369342	165	0	1.001669449081803	15	0	5.762081784386617	150	0	4.073587385019711	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010466	Chromosome_4A	7178	8	223	37.963220952911676	0.8622737782029818	0.5003050640634533	214	0	0.6658946149392009	105	0	0.37966673697532166	109	0	0.5297473512632437	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010467	Chromosome_4A	609	1	16	43.8423645320197	0.5523809523809524	0.8048289738430584	16	0	0.8048289738430584	16	0	NA	NA	NA	0.7713498622589532	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010468	Chromosome_4A	1257	1	45	43.914081145584724	0.7457285239677266	50	1	1	50	1	1	NA	NA	NA	1.6496465043205029	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010469	Chromosome_4A	1151	4	48	41.9635099913119	0.954163932161238	0.5780346820809249	48	0	0.5982053838484547	42	0	0.4807692307692308	6	0	0.7142857142857143	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010470	Chromosome_4A	2497	3	80	40.128153784541446	0.7964753493750124	0.7681228996639462	61	0	0.985663082437276	27	0	0.5170630816959669	34	0	0.9045226130653267	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010471	Chromosome_4A	5590	2	88	32.80858676207514	0.5850841135723529	0.6214689265536724	87	0	0.6149116064565718	25	0	0.6235969069593414	62	0	0.5827905382242029	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010472	Chromosome_4A	306	1	15	41.50326797385621	1.1590909090909092	0	15	0	0	15	0	NA	NA	NA	0.4653130287648054	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010473	Chromosome_4A	20735	10	296	35.558234868579696	0.45269913736118406	86.908014571949	293	0.9726962457337884	83.0379746835443	16	0.9375	87.09023721540112	277	0.9747292418772563	85.72621035058431	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010474	Chromosome_4A	2580	5	47	36.007751937984494	0.566317952549972	70.7810993249759	25	0.76	38.53211009174312	5	0.2	74.56896551724138	20	0.9	80.31189083820662	20	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010475	Chromosome_4A	294	1	8	45.57823129251701	0.525	1.2738853503184713	8	0	1.2738853503184713	8	0	NA	NA	NA	28.96969696969697	50	0.22	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010476	Chromosome_4A	3141	2	108	40.01910219675263	0.8623592934931821	0.7582720588235294	108	0	0.7582720588235294	108	0	NA	NA	NA	1.0945505356311132	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010477	Chromosome_4A	5978	7	175	38.22348611575778	0.8017175446744007	0.575752590886659	173	0	0.33783783783783783	36	0	0.6332992849846782	137	0	0.5482790130977764	57	0	unmethylated (<10%)	Q9ULF5	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)	epithelial to mesenchymal transition [GO:0001837]; intracellular monoatomic cation homeostasis [GO:0030003]; zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN010478	Chromosome_4A	18981	20	494	35.85164111479901	0.8099582055763215	1.4960152863867269	440	0	0.39091131199609086	102	0	1.7565077171158718	338	0	0.5951068988318272	92	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010479	Chromosome_4A	19235	11	642	38.28957629321549	0.9153517874268225	0.6121728210964172	538	0	0.46806167400881055	101	0	0.6361264930666789	437	0	0.4799451491258142	61	0	unmethylated (<10%)	Q9MZK9	Natural killer cells antigen CD94 (Killer cell lectin-like receptor subfamily D member 1) (NK cell receptor) (CD antigen CD94)	natural killer cell mediated immunity [GO:0002228]; negative regulation of natural killer cell mediated cytotoxicity [GO:0045953]; negative regulation of T cell mediated cytotoxicity [GO:0001915]; positive regulation of natural killer cell mediated cytotoxicity [GO:0045954]; stimulatory C-type lectin receptor signaling pathway [GO:0002223]	hit with GO BP
GN010480	Chromosome_4A	6258	10	221	36.12975391498881	1.0853601496725913	0.5689758434817329	218	0	0.5568445475638051	50	0	0.5723006486074017	168	0	0.45413260672116257	56	0	unmethylated (<10%)	Q8N695	Sodium-coupled monocarboxylate transporter 1 (Apical iodide transporter) (Electrogenic sodium monocarboxylate cotransporter) (Sodium iodide-related cotransporter) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate metabolic process [GO:1901847]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]; transmembrane transport [GO:0055085]	hit with GO BP
GN010481	Chromosome_4A	216	1	4	51.388888888888886	0.3717728055077453	0.5882352941176471	4	0	0.5882352941176471	4	0	NA	NA	NA	0.29205607476635514	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010482	Chromosome_4A	3278	3	77	38.01098230628432	0.650356605445963	93.77332547633078	77	1	94.8501872659176	24	1	93.48744717872235	53	1	30.304428044280442	36	0.3611111111111111	methylated (>=50%)	P78563	Double-stranded RNA-specific editase 1 (EC 3.5.4.37) (RNA-editing deaminase 1) (RNA-editing enzyme 1) (dsRNA adenosine deaminase)	adenosine to inosine editing [GO:0006382]; base conversion or substitution editing [GO:0016553]; mRNA modification [GO:0016556]; mRNA processing [GO:0006397]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of protein kinase activity by regulation of protein phosphorylation [GO:0044387]; positive regulation of viral genome replication [GO:0045070]; regulation of cell cycle [GO:0051726]; RNA processing [GO:0006396]	hit with GO BP
GN010483	Chromosome_4A	35789	30	623	36.89122356031183	0.5144310805468654	89.23809523809524	618	0.9142394822006472	92.57376505691236	195	0.9384615384615385	88.10551198829312	423	0.9030732860520094	14.812263176024802	45	0.2222222222222222	methylated (>=50%)	Q92576	PHD finger protein 3	DNA-templated transcription [GO:0006351]	hit with GO BP
GN010484	Chromosome_4A	717	1	29	44.76987447698745	0.8089402427637722	1.065891472868217	29	0	1.065891472868217	29	0	NA	NA	NA	0.5653976630229929	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010485	Chromosome_4A	381	1	18	49.08136482939633	0.7910034602076125	0.9868421052631579	18	0	0.9868421052631579	18	0	NA	NA	NA	0.5507955936352509	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003580	Chromosome_4A	354	1	12	46.045197740113	0.6401446654611211	1.0309278350515463	12	0	1.0309278350515463	12	0	NA	NA	NA	1.6245487364620939	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010486	Chromosome_4A	432	1	2	38.425925925925924	0.13793103448275862	0	2	0	0	2	0	NA	NA	NA	0.37546933667083854	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010487	Chromosome_4A	1575	5	42	42.34920634920635	0.5991305135404402	2.591973244147157	42	0	2.625	31	0	2.525252525252525	11	0	0.37859666834931854	71	0	unmethylated (<10%)	P12311	Alcohol dehydrogenase (EC 1.1.1.1) (ADH-T)	NA	hit, no GO BP
GN010488	Chromosome_4A	735	1	26	44.35374149659864	0.7225499092558983	0.922722029988466	26	0	0.922722029988466	26	0	NA	NA	NA	0.8088978766430738	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010489	Chromosome_4A	977	2	26	51.893551688843395	0.4010926545822017	1.0582010582010581	20	0	1.2861736334405145	17	0	0	3	0	1.017751479289941	100	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010490	Chromosome_4A	2779	2	38	42.389348686577904	0.38690979969736605	1.016260162601626	38	0	0.5181347150259067	13	0	1.1926605504587156	25	0	0.6576243321002877	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010491	Chromosome_4A	1827	5	56	37.547892720306514	0.8705329793751276	0.8202099737532809	56	0	1.145475372279496	17	0	0.6896551724137931	39	0	0.5221932114882507	45	0	unmethylated (<10%)	P07439	Lectin BRA-3	NA	hit, no GO BP
GN010492	Chromosome_4A	962	4	24	35.96673596673597	0.7730788548468106	0.8069522036002483	24	0	0.7374631268436578	20	0	1.1764705882352942	4	0	0.5937654626422563	49	0	unmethylated (<10%)	Q17NZ6	C-type lectin mosGCTL-1 (Mosquito galactose-specific binding C-type lectin) (mosGCTL-1)	NA	hit, no GO BP
GN010493	Chromosome_4A	22270	4	530	35.46475078581051	0.7576179174509643	0.8544726301735648	359	0.005571030640668524	0.272108843537415	19	0	0.8845208845208845	340	0.0058823529411764705	0.6830601092896175	40	0	unmethylated (<10%)	Q17NZ6	C-type lectin mosGCTL-1 (Mosquito galactose-specific binding C-type lectin) (mosGCTL-1)	NA	hit, no GO BP
GN010494	Chromosome_4A	6068	8	162	37.12920237310481	0.7746382978723404	0.5014435496125209	153	0	0.5707762557077626	53	0	0.4762890867674467	100	0	2.0754716981132075	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010495	Chromosome_4A	5650	6	89	33.73451327433628	0.5537599180675392	58.50328670150009	87	0.6436781609195402	44.237918215613384	10	0.6	59.92585727525486	77	0.6493506493506493	2.1957913998170175	23	0	methylated (>=50%)	B7Q2M2	U1 small nuclear ribonucleoprotein C (U1 snRNP C) (U1-C) (U1C)	mRNA 5'-splice site recognition [GO:0000395]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN010496	Chromosome_4A	429	1	15	47.31934731934732	0.6327433628318584	24	2	0	24	2	0	NA	NA	NA	30.480682839173404	66	0.2878787878787879	NA	NA	NA	NA	no Swiss-Prot hit
GN010497	Chromosome_4A	993	1	31	39.37562940584088	0.8092696776907303	0.7430997876857749	31	0	0.7430997876857749	31	0	NA	NA	NA	0.3054101221640489	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010498	Chromosome_4A	4821	7	124	37.04625596349305	0.7636661863445443	0.5633321952884943	123	0	0.4652435686918446	65	0	0.7259528130671506	58	0	1.1608057357459884	53	0	unmethylated (<10%)	Q8C8H8	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN010499	Chromosome_4A	12297	6	302	36.919573879808084	0.7211545015380654	0.7922816433454731	302	0	0.7768361581920904	72	0	0.7980356046654389	230	0	4.785077047850771	19	0	unmethylated (<10%)	Q8C8H8	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN010500	Chromosome_4A	6685	3	145	37.42707554225879	0.6194086598675971	68.11096811096812	143	0.7132867132867133	78.46820809248555	14	1	66.97349627043326	129	0.6821705426356589	81.38195777351248	35	0.9714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012931	Chromosome_4A	163	1	18	55.214723926380366	1.4517565561603167	0.22522522522522523	18	0	0.22522522522522523	18	0	NA	NA	NA	7.181442643787735	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010501	Chromosome_4A	20627	13	265	37.58665826344112	0.36384404645942386	82.59172521467603	232	0.9396551724137931	68.16502463054188	40	0.725	85.30844155844156	192	0.984375	5.327868852459017	52	0.019230769230769232	methylated (>=50%)	Q91XL9	Oxysterol-binding protein-related protein 1 (ORP-1) (OSBP-related protein 1)	cholesterol homeostasis [GO:0042632]; lysosome to ER cholesterol transport [GO:0090120]	hit with GO BP
GN010502	Chromosome_4A	201	1	10	46.26865671641791	0.9427767354596623	92.67139479905437	10	1	92.67139479905437	10	1	NA	NA	NA	10.75050709939148	19	0.05263157894736842	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010503	Chromosome_4A	493	2	13	39.75659229208925	0.6679520583637311	96.07843137254902	11	1	95.3125	9	1	100	2	1	90.32620922384702	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010504	Chromosome_4A	7796	11	95	35.3642893791688	0.39031233629827783	85.5643994211288	95	0.9578947368421052	82.58887876025524	27	0.9629629629629629	86.30106070864365	68	0.9558823529411765	39.3598615916955	21	0.2857142857142857	methylated (>=50%)	Q9BXW6	Oxysterol-binding protein-related protein 1 (ORP-1) (OSBP-related protein 1)	bile acid biosynthetic process [GO:0006699]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; lysosome to ER cholesterol transport [GO:0090120]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN010505	Chromosome_4A	4230	2	61	37.61229314420804	0.4127396971034801	74.3863393810032	61	0.9508196721311475	82.7790973871734	28	1	70.7973590655155	33	0.9090909090909091	7.542051003798155	53	0.07547169811320754	methylated (>=50%)	Q8NEP7	Kelch domain-containing protein 9 (Kelch/ankyrin repeat-containing cyclin A1-interacting protein)	NA	hit, no GO BP
GN010506	Chromosome_4A	425	2	22	49.411764705882355	0.88	0	13	0	0	11	0	0	2	0	0.8733624454148472	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010507	Chromosome_4A	7554	3	150	35.49113052687318	0.6329693754769196	61.55852624714705	150	0.7666666666666667	69.09448818897638	48	0.8333333333333334	60.06252442360297	102	0.7352941176470589	1.4055299539170507	65	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010508	Chromosome_4A	603	1	1	41.29353233830846	0.04855072463768116	81.48148148148148	1	1	81.48148148148148	1	1	NA	NA	NA	86.72032193158954	20	0.95	NA	NA	NA	NA	no Swiss-Prot hit
GN010509	Chromosome_4A	8735	5	62	34.081282198053806	0.24539963478016574	77.77208706786172	61	0.8524590163934426	95.32520325203252	9	1	75.24172282449457	52	0.8269230769230769	79.01008249312557	45	1	methylated (>=50%)	Q7ZUB3	Tetraspanin-31 (Tspan-31) (Sarcoma-amplified sequence homolog)	NA	hit, no GO BP
GN010510	Chromosome_4A	2085	4	25	34.53237410071942	0.40917333249601623	93.54614850798058	25	1	93.85342789598108	14	1	93.10924369747899	11	1	91.0838445807771	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010511	Chromosome_4A	12828	3	398	36.71655753040225	0.9209439851539084	3.5111744084136722	397	0	6.908315565031983	87	0	3.010495883351141	310	0	0.9667673716012085	47	0	unmethylated (<10%)	Q9UJT9	F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat protein 7) (F-box protein FBL6/FBL7)	G2/M transition of mitotic cell cycle [GO:0000086]; mitotic cell cycle [GO:0000278]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of apoptotic process [GO:0042981]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN010512	Chromosome_4A	943	2	52	43.90243902439025	1.1613300492610839	0.6388206388206388	48	0	0.6872852233676976	30	0	0.574052812858783	18	0	8.637873754152825	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010513	Chromosome_4A	1003	2	42	43.96809571286141	0.8719211822660099	4.970008568980291	42	0	5.753968253968254	35	0	0	7	0	0.9218612818261633	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010514	Chromosome_4A	4441	4	54	35.21729340238685	0.3921605180533752	70.10547132498353	54	0.7777777777777778	72.22222222222223	10	0.8	69.73684210526316	44	0.7727272727272727	51.429356789444746	61	0.5737704918032787	methylated (>=50%)	A4IGP0	Protein Hikeshi	cellular response to heat [GO:0034605]; protein import into nucleus [GO:0006606]; protein transport [GO:0015031]	hit with GO BP
GN020104	Chromosome_4A	5571	5	87	35.343744390594146	0.5017703072880756	4.799370574350905	75	0	5.8733790999237225	21	0	4.236610711430855	54	0	1.7605633802816902	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010515	Chromosome_4A	408	1	24	41.1764705882353	1.3895274584929758	0.4953560371517028	24	0	0.4953560371517028	24	0	NA	NA	NA	0.6072227548737615	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020250	Chromosome_4A	2524	6	27	34.58795562599049	0.3600532566887865	3.4246575342465753	20	0	3.4946236559139785	17	0	3.0303030303030303	3	0	0.46565774155995343	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010516	Chromosome_4A	198	1	10	41.91919191919192	1.1498257839721255	0.6269592476489029	10	0	0.6269592476489029	10	0	NA	NA	NA	0.5656108597285068	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020019	Chromosome_4A	1114	4	10	37.07360861759425	0.2666858182514603	28.91891891891892	9	0.3333333333333333	28.91891891891892	9	0.3333333333333333	NA	NA	NA	44.10801963993453	32	0.5	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010517	Chromosome_4A	430	2	5	31.3953488372093	0.4750331418471056	77.35849056603773	5	0.8	78.75647668393782	4	0.75	73.61111111111111	1	1	36.29213483146067	67	0.22388059701492538	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003614	Chromosome_4A	752	1	29	47.07446808510638	0.6961851556264964	NA	0	NA	NA	NA	NA	NA	NA	NA	52.083333333333336	4	0.75	NA	NA	NA	NA	no Swiss-Prot hit
GN010518	Chromosome_4A	8130	2	122	33.73923739237392	0.5274308048177395	72.19943199747554	104	0.6923076923076923	50.78534031413613	9	0.5555555555555556	74.32784041630529	95	0.7052631578947368	41.6701116163704	40	0.4	methylated (>=50%)	Q0UM32	Pre-rRNA-processing protein ESF2 (18S rRNA factor 2)	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000480]; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000472]; small-subunit processome assembly [GO:0034462]	hit with GO BP
GN010519	Chromosome_4A	6517	8	194	38.806199171397886	0.7909970219474962	0.5450185306300415	193	0	0.9395973154362416	48	0	0.4685059864653826	145	0	0.7941009642654566	36	0	unmethylated (<10%)	P56470	Galectin-4 (Gal-4) (Antigen NY-CO-27) (L-36 lactose-binding protein) (L36LBP) (Lactose-binding lectin 4)	cell adhesion [GO:0007155]	hit with GO BP
GN010520	Chromosome_4A	13229	18	319	35.90596416962733	0.7491583609323252	0.6814756569032173	317	0	0.6920415224913494	81	0	0.6776638430673205	236	0	0.6086142322097379	50	0	unmethylated (<10%)	Q08CX1	Ras and EF-hand domain-containing protein (EC 3.6.5.2)	zymogen granule exocytosis [GO:0070625]	hit with GO BP
GN010521	Chromosome_4A	339	1	15	43.657817109144545	1.009930486593843	0.24968789013732834	15	0	0.24968789013732834	15	0	NA	NA	NA	0.6859756097560976	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010522	Chromosome_4A	414	2	10	42.99516908212561	0.5636487406398911	0.8680555555555556	10	0	0.9960159362549801	9	0	0	1	0	4.407894736842105	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010523	Chromosome_4A	1383	1	49	39.26247288503254	0.9198724039636216	0.3980539584254755	49	0	0.3980539584254755	49	0	NA	NA	NA	0.8760951188986232	35	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010524	Chromosome_4A	2587	2	73	34.67336683417086	0.93918340958822355	2.2580645161290325	73	0	3.4223706176961604	22	0	1.853997682502897	51	0	2.119071644803229	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010525	Chromosome_4A	1700	4	39	39.35294117647059	0.5927687575995995	1.4722536806342015	39	0	1.990950226244344	27	0	0.6051437216338881	12	0	0.6507592190889371	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010526	Chromosome_4A	3038	4	89	37.03094140882159	0.8553685542549826	0.5619350109943807	86	0	1.4285714285714286	21	0	0.36111947035811015	65	0	1.238938053097345	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010527	Chromosome_4A	3067	2	96	38.89794587544832	0.8344584828336763	1.0977242302543508	96	0	1.1912225705329154	85	0	0.5504587155963303	11	0	1.8722466960352422	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010528	Chromosome_4A	294	1	1	39.1156462585034	0.08898305084745763	68.75	1	1	68.75	1	1	NA	NA	NA	67.66205389657684	21	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN010529	Chromosome_4A	2263	2	39	33.53954927087936	0.6135861177157635	62.31247713135748	39	0.6410256410256411	58.63095238095238	6	0.3333333333333333	62.828535669586984	33	0.696969696969697	58.06614491290078	53	0.5471698113207547	methylated (>=50%)	Q3SZ85	Putative peptidyl-tRNA hydrolase PTRHD1 (EC 3.1.1.29) (Peptidyl-tRNA hydrolase domain-containing protein 1)	NA	hit, no GO BP
GN010530	Chromosome_4A	12409	8	168	35.12772987347893	0.4425371559673925	82.65517527140135	168	0.9047619047619048	85.65996740901684	34	0.9117647058823529	82.11421865832193	134	0.9029850746268657	0.5238095238095238	43	0	methylated (>=50%)	Q8CB77	Elongin-A (EloA) (Elongin 110 kDa subunit) (RNA polymerase II transcription factor SIII subunit A1) (SIII p110) (Transcription elongation factor B polypeptide 3)	regulation of transcription by RNA polymerase II [GO:0006357]; transcription elongation by RNA polymerase II [GO:0006368]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN010531	Chromosome_4A	732	1	27	39.75409836065574	0.934468085106383	7.373653686826843	27	0	7.373653686826843	27	0	NA	NA	NA	0.5836575875486382	73	0	unmethylated (<10%)	A0A7M7GAR4	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AmFucTA) (Glycoprotein 3-alpha-L-fucosyltransferase FucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN010532	Chromosome_4A	833	2	31	38.775510204081634	0.9951059730250482	0.6349206349206349	31	0	0.7125890736342043	26	0	0.4784688995215311	5	0	0.313588850174216	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010533	Chromosome_4A	842	2	22	39.19239904988124	0.6810294117647059	1.7898832684824904	22	0	2.1555763823805063	18	0	0	4	0	3.7960954446854664	47	0	unmethylated (<10%)	P52729	Homeobox protein engrailed-2-A (En-2A) (Homeobox protein en-2-A) (En2 1.4)	neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010534	Chromosome_4A	1716	2	45	34.67365967365967	0.873371335504886	0.4694835680751174	44	0	0.37776578521316784	30	0	0.6200177147918512	14	0	1.145374449339207	47	0	unmethylated (<10%)	P31533	Homeobox protein engrailed-2b (Homeobox protein en-2b) (Zf-En-1)	anterior/posterior pattern specification [GO:0009952]; cell fate specification [GO:0001708]; midbrain development [GO:0030901]; midbrain-hindbrain boundary development [GO:0030917]; neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010535	Chromosome_4A	3190	2	91	34.23197492163009	0.9795445956160241	0.5180388529139686	91	0	0.30120481927710846	52	0	0.6445941986522121	39	0	0.6202804746494067	62	0	unmethylated (<10%)	Q14549	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1)	regulation of nervous system development [GO:0051960]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010536	Chromosome_4A	4062	3	113	38.306253077301825	0.7591154683879674	0.6525285481239804	41	0	0.5988023952095808	10	0	0.672645739910314	31	0	0.46565774155995343	35	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010537	Chromosome_4A	4707	3	121	37.2848948374761	0.7402905806934631	2.899527983816588	93	0	0.7824726134585289	22	0	3.480876665234207	71	0	0.36496350364963503	51	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010538	Chromosome_4A	76291	25	1469	35.36590161355861	0.6223922998132159	10.154788229290697	1209	0.07775020678246485	0.5451154784105581	159	0	11.447538547636967	1050	0.08952380952380952	0.6352390504847877	44	0	sparse (10-50%)	Q9VN14	Contactin	axon ensheathment [GO:0008366]; axon guidance [GO:0007411]; cell adhesion involved in heart morphogenesis [GO:0061343]; dendrite self-avoidance [GO:0070593]; establishment of glial blood-brain barrier [GO:0060857]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; homophilic cell-cell adhesion [GO:0007156]; nerve maturation [GO:0021682]; septate junction assembly [GO:0019991]	hit with GO BP
GN010539	Chromosome_4A	12886	13	185	35.48036628899581	0.45720169723359516	89.99434252000323	185	1	96.13483146067416	41	1	88.64800945999211	144	1	82.31511254019293	9	1	methylated (>=50%)	A2AR02	Peptidyl-prolyl cis-trans isomerase G (PPIase G) (Peptidyl-prolyl isomerase G) (EC 5.2.1.8) (Cyclophilin G) (Rotamase G)	protein folding [GO:0006457]	hit with GO BP
GN010540	Chromosome_4A	10407	6	188	35.620255597194195	0.5697517166669579	91.95411392405063	178	1	93.29696024941543	27	1	91.80241260896364	151	1	96.6854724964739	128	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010541	Chromosome_4A	305	2	4	33.442622950819676	0.470679012345679	90.69767441860465	4	1	90.69767441860465	4	1	NA	NA	NA	94.83568075117371	35	1	NA	NA	NA	NA	no Swiss-Prot hit
GN010542	Chromosome_4A	522	1	0	40.804597701149426	0	NA	0	NA	NA	NA	NA	NA	NA	NA	93.84878257155061	36	1	NA	NA	NA	NA	no Swiss-Prot hit
GN010543	Chromosome_4A	3838	7	32	36.8421052631579	0.26193873394288003	89.89751098096633	32	1	93.66262814538676	19	1	85.75819672131148	13	1	90.0709219858156	8	1	methylated (>=50%)	Q7SXW0	Mitochondrial glutathione transporter SLC25A39 (Solute carrier family 25 member 39)	glutathione import into mitochondrion [GO:0160007]; heme biosynthetic process [GO:0006783]; manganese ion transport [GO:0006828]; mitochondrial transmembrane transport [GO:1990542]	hit with GO BP
GN010544	Chromosome_4A	409	3	13	38.386308068459655	0.897838568051334	0.17543859649122806	13	0	0.24330900243309003	10	0	0	3	0	0.9444444444444444	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010545	Chromosome_4A	15463	11	372	36.96565996249111	0.704240881636191	1.9115955523908639	366	0	0.5784280367471929	69	0	2.167384776080428	297	0	0.6237006237006237	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010546	Chromosome_4A	3858	2	187	36.88439606013478	1.4272606414547873	0.881704628949302	141	0	1.9943019943019944	18	0	0.8050265069703515	123	0	0.5732152162584679	47	0	unmethylated (<10%)	Q21281	Transmembrane matrix receptor MUP-4 (Muscle-positioning protein 4)	NA	hit, no GO BP
GN010547	Chromosome_4A	623	2	17	40.6099518459069	0.6623514696685429	0.631911532385466	17	0	0.6722689075630253	16	0	0	1	0	1.1222681630242173	34	0	unmethylated (<10%)	P13944	Collagen alpha-1(XII) chain (Fibrochimerin)	endodermal cell differentiation [GO:0035987]	hit with GO BP
GN010548	Chromosome_4A	35295	19	752	36.17792888511121	0.6537167154662494	86.44083239185102	749	0.9599465954606141	90.6522855675398	34	0.9705882352941176	86.28591940450775	715	0.9594405594405594	3.5143769968051117	49	0	methylated (>=50%)	P31335	Bifunctional purine biosynthesis protein ATIC (AICAR transformylase/inosine monophosphate cyclohydrolase) (ATIC) [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase) (AICAR formyltransferase) (AICAR transformylase); Inosine 5'-monophosphate cyclohydrolase (IMP cyclohydrolase) (EC 3.5.4.10) (IMP synthase) (Inosinicase)]	'de novo' IMP biosynthetic process [GO:0006189]	hit with GO BP
GN010549	Chromosome_4A	891	1	39	43.88327721661055	0.9318584070796461	0.33557046979865773	39	0	0.33557046979865773	39	0	NA	NA	NA	0.4620716211012707	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010550	Chromosome_4A	1659	1	71	42.555756479807116	0.9608839652809502	7.96277145811789	71	0	7.96277145811789	71	0	NA	NA	NA	4.239130434782608	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010551	Chromosome_4A	8017	9	219	37.00885618061619	0.7986650727236502	0.687960687960688	215	0	0.6551518761167362	50	0	0.6944444444444444	165	0	0.5329780146568954	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010552	Chromosome_4A	741	1	29	39.67611336032389	0.9990701566785997	0.5068423720223011	29	0	0.5068423720223011	29	0	NA	NA	NA	0.794392523364486	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010553	Chromosome_4A	3046	3	70	36.63821405121471	0.6885105091335333	0.9088405397961994	70	0	0.8333333333333334	36	0	0.9830693610049154	34	0	1.3996889580093312	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010554	Chromosome_4A	1918	2	57	38.112617309697605	0.819326408561536	0.6923837784371909	57	0	0.705371676614216	30	0	0.6722689075630253	27	0	1.5616127200454288	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010555	Chromosome_4A	957	1	37	44.40961337513062	0.7915101931330472	0.7950530035335689	37	0	0.7950530035335689	37	0	NA	NA	NA	0.8806262230919765	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010556	Chromosome_4A	4370	3	108	39.473684210526315	0.634726802265844	1.9705800721620872	105	0	0.5524861878453039	42	0	2.73972602739726	63	0	0.36960985626283366	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010557	Chromosome_4A	5092	5	110	34.583660644147685	0.7224856436741875	3.134258537346016	108	0	1.9636363636363636	25	0	3.4537514886859864	83	0	6.861111111111111	54	0	unmethylated (<10%)	Q9Z2P8	Vesicle-associated membrane protein 5 (VAMP-5) (Myobrevin)	Golgi to plasma membrane protein transport [GO:0043001]; skeletal muscle tissue development [GO:0007519]	hit with GO BP
GN010558	Chromosome_4A	1158	1	5	47.15025906735751	0.08367052023121388	NA	0	NA	NA	NA	NA	NA	NA	NA	8.725868725868725	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010559	Chromosome_4A	876	1	27	39.15525114155251	0.8492029297716501	1.3764624913971095	27	0	1.3764624913971095	27	0	NA	NA	NA	1.2658227848101267	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010560	Chromosome_4A	936	1	17	53.098290598290596	0.48186057779662045	0.29732408325074333	17	0	0.29732408325074333	17	0	NA	NA	NA	0.6964229186451408	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010561	Chromosome_4A	4553	5	129	39.71008126509994	0.7187187958883994	0.5679801206957756	129	0	0.6093189964157706	59	0	0.5274261603375527	70	0	0.6810035842293907	50	0	unmethylated (<10%)	P79763	Follicle-stimulating hormone receptor (FSH-R) (Follitropin receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cellular response to follicle-stimulating hormone stimulus [GO:0071372]; follicle-stimulating hormone signaling pathway [GO:0042699]; G protein-coupled receptor signaling pathway [GO:0007186]; hormone-mediated signaling pathway [GO:0009755]; male gonad development [GO:0008584]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of luteinizing hormone secretion [GO:0033686]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]	hit with GO BP
GN010562	Chromosome_4A	12379	9	170	34.1950076742871	0.46993121737782834	78.8009592326139	167	0.8562874251497006	72.44062244062243	47	0.7872340425531915	80.34366309098132	120	0.8833333333333333	0.4838709677419355	62	0	methylated (>=50%)	Q99PP7	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin homolog) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	gene expression [GO:0010467]; negative regulation of BMP signaling pathway [GO:0030514]; protein ubiquitination [GO:0016567]; regulation of transforming growth factor beta receptor signaling pathway [GO:0017015]	hit with GO BP
GN012003	Chromosome_4A	631	1	13	48.96988906497623	0.35575505247636396	0.5882352941176471	12	0	0.5882352941176471	12	0	NA	NA	NA	0.79232693911593	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010563	Chromosome_4A	678	1	27	41.445427728613566	0.929332927200731	1.2280701754385965	27	0	1.2280701754385965	27	0	NA	NA	NA	3.959355290819902	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010564	Chromosome_4A	515	2	16	46.79611650485437	0.5783267827063447	0.6060606060606061	16	0	0.6329113924050633	15	0	0	1	0	2.0080321285140563	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010565	Chromosome_4A	1224	1	32	42.56535947712418	0.5773584905660377	16.304347826086957	13	0	16.304347826086957	13	0	NA	NA	NA	21.116846550915064	79	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010566	Chromosome_4A	7070	7	107	34.893917963224894	0.49948169423261035	87.01475595913735	107	0.9906542056074766	86.46464646464646	28	1	87.12627986348123	79	0.9873417721518988	89.2638036809816	14	1	methylated (>=50%)	Q9BV94	ER degradation-enhancing alpha-mannosidase-like protein 2	carbohydrate metabolic process [GO:0005975]; endoplasmic reticulum mannose trimming [GO:1904380]; endoplasmic reticulum unfolded protein response [GO:0030968]; ERAD pathway [GO:0036503]; positive regulation of retrograde protein transport, ER to cytosol [GO:1904154]; trimming of terminal mannose on C branch [GO:0036510]; ubiquitin-dependent glycoprotein ERAD pathway [GO:0097466]; viral protein processing [GO:0019082]	hit with GO BP
GN010567	Chromosome_4A	1965	1	47	38.93129770992366	0.6318155075458016	0.7210205213533001	47	0	0.7210205213533001	47	0	NA	NA	NA	1.0309278350515463	25	0	unmethylated (<10%)	Q9FY48	E3 ubiquitin-protein ligase KEG (EC 2.3.2.27) (EC 2.7.11.1) (Protein KEEP ON GOING) (RING finger protein KEG) (RING-type E3 ubiquitin transferase KEG)	abscisic acid-activated signaling pathway [GO:0009738]; defense response [GO:0006952]; developmental growth [GO:0048589]; endosomal transport [GO:0016197]; late endosome to vacuole transport [GO:0045324]; negative regulation of abscisic acid-activated signaling pathway [GO:0009788]; protein ubiquitination [GO:0016567]; response to abscisic acid [GO:0009737]; secretion by cell [GO:0032940]	hit with GO BP
GN010568	Chromosome_4A	9846	5	225	34.643510054844604	0.7617011824960872	0.7302298564434486	217	0	0.8488964346349746	26	0	0.7173733100340293	191	0	0.5018820577164367	31	0	unmethylated (<10%)	Q8R367	Ras-related and estrogen-regulated growth inhibitor (EC 3.6.5.2)	establishment or maintenance of cell polarity [GO:0007163]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]	hit with GO BP
GN010569	Chromosome_4A	663	1	18	39.21568627450981	0.7215672047886813	14.926931106471816	18	0.1111111111111111	14.926931106471816	18	0.1111111111111111	NA	NA	NA	1.3248847926267282	51	0	sparse (10-50%)	O35796	Complement component 1 Q subcomponent-binding protein, mitochondrial (GC1q-R protein) (Glycoprotein gC1qBP) (C1qBP)	cytosolic ribosome assembly [GO:0042256]; immune response [GO:0006955]; mitochondrial RNA catabolic process [GO:0000957]; negative regulation of defense response to virus [GO:0050687]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; negative regulation of interleukin-12 production [GO:0032695]; negative regulation of MDA-5 signaling pathway [GO:0039534]; negative regulation of mRNA splicing, via spliceosome [GO:0048025]; negative regulation of RIG-I signaling pathway [GO:0039536]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of type II interferon production [GO:0032689]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell adhesion [GO:0045785]; positive regulation of dendritic cell chemotaxis [GO:2000510]; positive regulation of mitochondrial translation [GO:0070131]; positive regulation of neutrophil chemotaxis [GO:0090023]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; positive regulation of trophoblast cell migration [GO:1901165]; regulation of complement activation [GO:0030449]	hit with GO BP
GN010570	Chromosome_4A	1728	6	13	35.416666666666664	0.24115424252834078	36.809815950920246	9	0.2222222222222222	42.30769230769231	5	0.4	27.11864406779661	4	0	0.8943089430894309	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010571	Chromosome_4A	5145	3	68	35.626822157434404	0.418785371599299	88.1930479747199	63	0.873015873015873	83.31936295054484	32	0.75	90.73426573426573	31	1	37.03703703703704	14	0.42857142857142855	methylated (>=50%)	Q8WVM8	Sec1 family domain-containing protein 1 (SLY1 homolog) (Sly1p) (Syntaxin-binding protein 1-like 2)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; negative regulation of autophagosome assembly [GO:1902902]; post-Golgi vesicle-mediated transport [GO:0006892]; regulation of ER to Golgi vesicle-mediated transport [GO:0060628]; regulation of protein transport [GO:0051223]; response to toxic substance [GO:0009636]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN010572	Chromosome_4A	7026	9	211	37.13350412752633	0.8712152465577123	0.561027303328762	184	0	0.42652190771616905	69	0	0.6247703050349136	115	0	0.49645390070921985	47	0	unmethylated (<10%)	A6H782	Tektin-3	cilium assembly [GO:0060271]; cilium movement involved in cell motility [GO:0060294]; flagellated sperm motility [GO:0030317]; regulation of brood size [GO:0060378]	hit with GO BP
GN010573	Chromosome_4A	3828	4	81	34.195402298850574	0.7241872197309417	0.5024154589371981	80	0	0.4562043795620438	20	0	0.5148320666830105	60	0	0.7210845111047015	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010574	Chromosome_4A	2642	2	75	36.86601059803179	0.8354837077514673	2.0567667626491155	70	0	0	8	0	2.3245002324500232	62	0	0.4276315789473684	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010575	Chromosome_4A	4567	5	153	37.7490694109919	0.9408469023796155	0.988929889298893	153	0	0.4	39	0	1.1940298507462686	114	0	0.4068584713746004	60	0	unmethylated (<10%)	Q29485	Plasminogen [Cleaved into: Plasmin (EC 3.4.21.7); Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	proteolysis [GO:0006508]	hit with GO BP
GN010576	Chromosome_4A	591	1	28	41.6243654822335	1.0996810207336523	0.4743083003952569	28	0	0.4743083003952569	28	0	NA	NA	NA	0.922874093605801	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010577	Chromosome_4A	26815	10	539	36.66231586798434	0.5986139583104849	88.05339641770868	510	0.9568627450980393	89.25501432664757	26	0.9615384615384616	87.99389941122224	484	0.9566115702479339	0.8928571428571429	84	0	methylated (>=50%)	Q3T058	Translation initiation factor eIF2B subunit delta (eIF2B GDP-GTP exchange factor subunit delta)	cytoplasmic translational initiation [GO:0002183]; myelination [GO:0042552]; oligodendrocyte development [GO:0014003]; ovarian follicle development [GO:0001541]; T cell receptor signaling pathway [GO:0050852]; translational initiation [GO:0006413]	hit with GO BP
GN010578	Chromosome_4A	1023	1	42	37.634408602150536	1.1979590698711873	0.4743423889607589	42	0	0.4743423889607589	42	0	NA	NA	NA	1.353135313531353	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010579	Chromosome_4A	834	1	17	39.68824940047961	0.535827664399093	0.9433962264150944	15	0	0.9433962264150944	15	0	NA	NA	NA	0.440852314474651	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010580	Chromosome_4A	795	1	28	45.15723270440252	0.6920780997388385	21.568627450980394	27	0	21.568627450980394	27	0	NA	NA	NA	3.0564545127651925	69	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010581	Chromosome_4A	807	1	21	50.061957868649316	0.4194386694386694	1.0309278350515463	21	0	1.0309278350515463	21	0	NA	NA	NA	0.6622516556291391	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010582	Chromosome_4A	27805	11	799	36.554576515015285	0.8604313311839522	1.5109505761452955	786	0	0.5011389521640092	55	0	1.5706665229807641	731	0	0.8083140877598153	42	0	unmethylated (<10%)	O57321	Excitatory amino acid transporter 1 (SEAAT1) (Sodium-dependent glutamate/aspartate transporter) (GLAST)	chloride transmembrane transport [GO:1902476]; D-aspartate import across plasma membrane [GO:0070779]; L-aspartate import across plasma membrane [GO:0140009]; L-glutamate import across plasma membrane [GO:0098712]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN010583	Chromosome_4A	7633	8	142	36.76143063015852	0.5529158923414625	81.26619770455387	142	0.8450704225352113	84.92146596858639	17	0.8823529411764706	80.77783995523224	125	0.84	1.4165792235047219	56	0	methylated (>=50%)	Q99MZ7	Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38)	fatty acid elongation [GO:0030497]; phytol metabolic process [GO:0033306]	hit with GO BP
GN010584	Chromosome_4A	4803	9	58	34.20778679991672	0.414963311197905	86.28330255869164	58	0.9827586206896551	91.76	19	1	83.58913813459267	39	0.9743589743589743	7.618080243778568	33	0.030303030303030304	methylated (>=50%)	A2VDC2	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (EC 3.1.2.4) (3-hydroxyisobutyryl-coenzyme A hydrolase) (HIB-CoA hydrolase) (HIBYL-CoA-H)	L-valine catabolic process [GO:0006574]	hit with GO BP
GN010585	Chromosome_4A	2808	3	63	35.18518518518518	0.7287797643569252	0.7839127471029311	62	0	0.4918032786885246	14	0	0.8605851979345955	48	0	0.5077574047954866	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010586	Chromosome_4A	15585	29	380	34.28296438883542	0.8301581369739199	0.8029797320176075	377	0	0.7119850822173249	124	0	0.8393123054013808	253	0	0.6394490900147565	39	0	unmethylated (<10%)	Q8WXR4	Myosin-IIIb (EC 2.7.11.1)	auditory receptor cell stereocilium organization [GO:0060088]; cochlea morphogenesis [GO:0090103]; positive regulation of filopodium assembly [GO:0051491]; regulation of actin filament length [GO:0030832]; sensory perception of sound [GO:0007605]	hit with GO BP
GN010587	Chromosome_4A	35761	22	484	34.72497972651772	0.44908776797905364	27.81642865861101	483	0.2670807453416149	44.725168756027	100	0.45	24.638416645521442	383	0.2193211488250653	37.81315240083507	56	0.375	sparse (10-50%)	F6QRE9	Glutamate rich 3	cilium assembly [GO:0060271]	hit with GO BP
GN010588	Chromosome_4A	546	1	22	43.772893772893774	0.8429473684210527	22.244897959183675	22	0	22.244897959183675	22	0	NA	NA	NA	5.677867902665121	41	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010589	Chromosome_4A	4821	3	38	35.3246214478324	0.25984426194630017	67.06443914081146	38	0.7368421052631579	82.73464658169178	20	0.95	56.08766233766234	18	0.5	75.00918779860345	35	0.9142857142857143	methylated (>=50%)	Q5ZM14	Na(+)/H(+) exchange regulatory cofactor NHE-RF1 (NHERF-1) (Ezrin-radixin-moesin-binding phosphoprotein 50) (EBP50) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 isoform A3 regulatory factor 1)	bile acid secretion [GO:0032782]; glutathione transport [GO:0034635]; negative regulation of cell motility [GO:2000146]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of platelet-derived growth factor receptor signaling pathway [GO:0010642]; protein localization to plasma membrane [GO:0072659]; regulation of protein kinase activity [GO:0045859]; renal absorption [GO:0070293]	hit with GO BP
GN010590	Chromosome_4A	657	1	15	39.87823439878235	0.5783450704225352	0	2	0	0	2	0	NA	NA	NA	2.2598870056497176	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010591	Chromosome_4A	4524	3	61	33.863837312113176	0.47038650019175865	1.8910741301059002	51	0	4.430379746835443	7	0	1.7296862429605793	44	0	0.7790368271954674	39	0	unmethylated (<10%)	Q9FT73	ATP-dependent DNA helicase Q-like 2 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ2) (RecQ-like protein 2) (AtRQ2) (AtRecQ2) (AtRecQl2)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN010592	Chromosome_4A	1424	4	32	40.73033707865169	0.5426118434370497	0.76103500761035	24	0	0.76103500761035	24	0	NA	NA	NA	0.6321112515802781	86	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010593	Chromosome_4A	1053	1	52	43.3048433048433	1.0661422535485503	0.9282700421940928	52	0	0.9282700421940928	52	0	NA	NA	NA	55.901116427432214	57	0.3684210526315789	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010594	Chromosome_4A	27638	20	371	34.41276503364932	0.4536699279301043	84.42445263386082	355	0.923943661971831	92.19119734973971	42	0.9761904761904762	83.78251515744182	313	0.9169329073482428	66.80032076984763	53	0.7735849056603774	methylated (>=50%)	Q155U0	Vacuolar protein sorting-associated protein 51 homolog (Protein fat-free)	endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; Golgi vesicle transport [GO:0048193]; lipid digestion [GO:0044241]; lysosomal transport [GO:0007041]; regulation of phospholipase activity [GO:0010517]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN010595	Chromosome_4A	3330	2	25	35.4054054054054	0.2415507996564611	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN010596	Chromosome_4A	1746	1	18	38.65979381443299	0.2764942902890926	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010597	Chromosome_4A	1746	1	18	38.65979381443299	0.2764942902890926	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010598	Chromosome_4A	3330	2	25	35.4054054054054	0.2415507996564611	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN010599	Chromosome_4A	537	1	15	43.38919925512104	0.5940265486725663	36.964285714285715	15	0	36.964285714285715	15	0	NA	NA	NA	6.581933726736269	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010600	Chromosome_4A	318	1	7	41.19496855345912	0.5191231343283582	0.9478672985781991	7	0	0.9478672985781991	7	0	NA	NA	NA	21.358680458484763	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010601	Chromosome_4A	393	1	6	50.38167938931298	0.2615060441388488	16.27906976744186	6	0	16.27906976744186	6	0	NA	NA	NA	3.345724907063197	38	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010602	Chromosome_4A	19595	7	270	34.12094922174024	0.473410823579942	88.37266957556525	265	0.9433962264150944	94.07865665046398	40	1	87.65149399609048	225	0.9333333333333333	95.49425287356321	28	1	methylated (>=50%)	Q5W1J6	Forkhead box protein M1 (XlFoxM1)	DNA damage response, signal transduction by p53 class mediator [GO:0030330]; G2/M transition of mitotic cell cycle [GO:0000086]; positive regulation of double-strand break repair [GO:2000781]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; regulation of mitotic cell cycle [GO:0007346]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010603	Chromosome_4A	1232	4	28	38.87987012987013	0.6484210526315789	0.4909983633387889	28	0	0.43541364296081275	16	0	0.5628517823639775	12	0	0.785024154589372	68	0	unmethylated (<10%)	P13277	Digestive cysteine proteinase 1 (EC 3.4.22.-)	proteolysis [GO:0006508]	hit with GO BP
GN010604	Chromosome_4A	273	1	14	47.985347985347985	0.91	1.3182674199623352	14	0	1.3182674199623352	14	0	NA	NA	NA	0.6531678641410843	43	0	unmethylated (<10%)	Q8C8U0	Liprin-beta-1 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein-binding protein 1) (PTPRF-interacting protein-binding protein 1)	cortical microtubule organization [GO:0043622]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN010605	Chromosome_4A	631	2	8	40.57052297939778	0.31131668208448965	76.76470588235294	8	0.875	86.02941176470588	7	1	39.705882352941174	1	0	49.6124031007752	8	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010606	Chromosome_4A	39256	21	454	35.01120847768494	0.3780266008006758	85.37527206346978	435	0.9563218390804598	93.54192740926158	76	1	84.04311788003757	359	0.947075208913649	74.61629279811098	12	1	methylated (>=50%)	Q8C8U0	Liprin-beta-1 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein-binding protein 1) (PTPRF-interacting protein-binding protein 1)	cortical microtubule organization [GO:0043622]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN010607	Chromosome_4A	2067	1	66	39.138848572810836	0.833834531318762	2.4318107131120605	66	0	2.4318107131120605	66	0	NA	NA	NA	2.3547535211267605	49	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN010608	Chromosome_4A	2103	1	75	39.46742748454589	0.9203017784624002	11.831905344757242	75	0	11.831905344757242	75	0	NA	NA	NA	2.179732313575526	45	0	sparse (10-50%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN010609	Chromosome_4A	28642	15	306	34.85790098456812	0.352490439330692	77.54061300667684	303	0.9207920792079208	87.37601442741209	21	1	76.93166592228674	282	0.9148936170212766	89.30659983291562	22	1	methylated (>=50%)	Q0P4Y8	Lipase maturation factor 2	protein maturation [GO:0051604]	hit with GO BP
GN010610	Chromosome_4A	2858	2	47	39.67809657102869	0.41834506943557703	91.30636913063691	44	1	93.55057705363204	37	1	86.4306784660767	7	1	13.878080415045396	55	0.12727272727272726	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010611	Chromosome_4A	15449	6	267	35.05728526118195	0.563057237722547	87.94461685366436	255	0.9294117647058824	56.4290473017988	29	0.5517241379310345	91.04555883316945	226	0.9778761061946902	25.941747572815533	40	0.225	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010612	Chromosome_4A	195	1	6	50.76923076923077	0.5652173913043478	0	6	0	0	6	0	NA	NA	NA	2.787068004459309	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010613	Chromosome_4A	13148	5	340	36.13477334955887	0.7922070833483966	4.208872758788798	339	0	0.8683068017366136	17	0	4.338773213280811	322	0	4.7689282202556535	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010614	Chromosome_4A	3447	4	48	37.742964897011895	0.3935736475782242	92.56360078277886	48	1	95.47920433996383	13	1	91.75824175824175	35	1	66.64795058955643	57	0.7543859649122807	methylated (>=50%)	Q3T106	Serine/arginine-rich splicing factor 7 (Splicing factor, arginine/serine-rich 7)	negative regulation of mRNA splicing, via spliceosome [GO:0048025]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN010615	Chromosome_4A	8535	7	107	33.520796719390745	0.4474655646843005	79.51465878295147	105	0.8285714285714286	70.56389032591827	31	0.7096774193548387	82.3120452708165	74	0.8783783783783784	73.28646748681898	56	0.8035714285714286	methylated (>=50%)	Q3T106	Serine/arginine-rich splicing factor 7 (Splicing factor, arginine/serine-rich 7)	negative regulation of mRNA splicing, via spliceosome [GO:0048025]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN010616	Chromosome_4A	12146	4	308	37.95488226576651	0.7168286203508255	8.51664314767162	219	0	6.612529002320185	23	0	8.66338846669647	196	0	1.167964404894327	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001665	Chromosome_4A	1683	3	16	32.62032085561497	0.35746714456391876	78.04878048780488	15	0.9333333333333333	80.03618817852835	12	1	71.09704641350211	3	0.6666666666666666	90	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010617	Chromosome_4A	740	3	7	41.62162162162162	0.23257902298850575	62.0253164556962	7	0.7142857142857143	62.0253164556962	7	0.7142857142857143	NA	NA	NA	86.57548125633232	45	0.9777777777777777	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010618	Chromosome_4A	1074	4	12	40.968342644320295	0.28617106314948043	20.930232558139537	8	0	20.930232558139537	8	0	NA	NA	NA	83.19088319088318	27	0.8888888888888888	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001664	Chromosome_4A	356	1	6	39.04494382022472	0.47214854111405835	3.3444816053511706	6	0	3.3444816053511706	6	0	NA	NA	NA	52.18515645203	42	0.38095238095238093	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010619	Chromosome_4A	24253	15	182	35.08844266688657	0.24979400980513328	87.16228981673909	181	0.9723756906077348	81.86646433990896	24	0.9166666666666666	87.91540785498489	157	0.9808917197452229	15.78604044357469	16	0.1875	methylated (>=50%)	Q0VDN7	RUN domain-containing protein 1	in utero embryonic development [GO:0001701]	hit with GO BP
GN010620	Chromosome_4A	528	1	3	44.696969696969695	0.27197802197802196	73.48993288590604	3	1	73.48993288590604	3	1	NA	NA	NA	82.86384976525821	30	0.9666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN010621	Chromosome_4A	11259	8	129	33.43991473487876	0.40995253573650337	81.13986169975463	128	0.8359375	64.96430532674354	33	0.7272727272727273	85.26242127361792	95	0.8736842105263158	30.463182897862232	55	0.45454545454545453	methylated (>=50%)	Q8BJ56	Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase) (Calcium-independent phospholipase A2-zeta) (iPLA2-zeta) (EC 3.1.1.4) (Desnutrin)	diacylglycerol biosynthetic process [GO:0006651]; intracellular triglyceride homeostasis [GO:0035356]; lipid catabolic process [GO:0016042]; lipid droplet disassembly [GO:1905691]; lipid droplet fusion [GO:0160077]; lipid droplet organization [GO:0034389]; lipid homeostasis [GO:0055088]; lipid storage [GO:0019915]; positive regulation of triglyceride catabolic process [GO:0010898]; retinoid metabolic process [GO:0001523]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN010622	Chromosome_4A	56130	13	913	34.601817210048104	0.54391128143798	53.597050617776006	901	0.5671476137624861	37.64803084549711	101	0.22772277227722773	54.62048246001591	800	0.61	2.1891010712622263	35	0	methylated (>=50%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN010623	Chromosome_4A	429	1	21	48.484848484848484	0.8330097087378641	0	4	0	0	4	0	NA	NA	NA	6.9464544138929085	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010624	Chromosome_4A	243	1	8	49.794238683127574	0.5445378151260504	0	8	0	0	8	0	NA	NA	NA	0.7973421926910299	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010625	Chromosome_4A	1514	2	2	34.21400264200793	0.04869654717679034	0	2	0	0	2	0	NA	NA	NA	0.8450704225352113	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010626	Chromosome_4A	894	2	20	37.58389261744966	0.633705475810739	0.5219206680584552	20	0	0.5154639175257731	13	0	0.5319148936170213	7	0	0.623608017817372	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010627	Chromosome_4A	7289	3	177	34.654959528055976	0.8235327535669421	0.5711653615845232	165	0	0.2702702702702703	24	0	0.6054386865059005	141	0	0.7236544549977386	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010628	Chromosome_4A	210	1	3	56.19047619047619	0.1887923284387174	47.16981132075472	3	0.3333333333333333	47.16981132075472	3	0.3333333333333333	NA	NA	NA	32.72727272727273	21	0.23809523809523808	NA	NA	NA	NA	no Swiss-Prot hit
GN012816	Chromosome_4A	1186	2	7	34.31703204047218	0.20179873602333495	33.07573415765069	7	0.2857142857142857	31.70731707317073	5	0.2	37.41935483870968	2	0.5	50	10	0.4	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010629	Chromosome_4A	1275	1	38	40	0.7456599359763605	74.53666398066076	38	1	74.53666398066076	38	1	NA	NA	NA	51.731644567583615	44	0.7045454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010630	Chromosome_4A	1041	1	25	37.36791546589817	0.6981329470465154	48.62301101591187	25	0.56	48.62301101591187	25	0.56	NA	NA	NA	52.456011730205276	26	0.6923076923076923	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010631	Chromosome_4A	249	1	8	47.791164658634536	0.5981981981981982	0.4830917874396135	8	0	0.4830917874396135	8	0	NA	NA	NA	0.6915629322268326	106	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010632	Chromosome_4A	25911	12	247	39.222723939639536	0.2522066247726304	70.84084685767715	245	0.763265306122449	56.984273820536544	21	0.6190476190476191	71.91909012381227	224	0.7767857142857143	7.027027027027027	10	0	methylated (>=50%)	Q9UBP9	PTB domain-containing engulfment adapter protein 1 (Cell death protein 6 homolog) (PTB domain adapter protein CED-6) (Protein GULP)	apoptotic process [GO:0006915]; phagocytosis, engulfment [GO:0006911]	hit with GO BP
GN010633	Chromosome_4A	4598	5	133	38.19051761635494	0.798510921951366	0.5794701986754967	132	0	0.7326007326007326	45	0	0.5347593582887701	87	0	0.4138644593895499	43	0	unmethylated (<10%)	P56590	Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1) (Cytochrome P450 form 6) (Cytochrome P450-C) (Cytochrome P450-P1) (DAH1) (Hydroperoxy icosatetraenoate dehydratase) (EC 4.2.1.152)	estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; toxin metabolic process [GO:0009404]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN010634	Chromosome_4A	396	1	23	63.888888888888886	0.5802752293577982	0	5	0	0	5	0	NA	NA	NA	2.217821782178218	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010635	Chromosome_4A	840	1	48	57.142857142857146	0.706488409174537	0	19	0	0	19	0	NA	NA	NA	0	24	0	unmethylated (<10%)	O74508	Set1 complex component spp1 (Set1C component spp1) (COMPASS component spp1) (Complex proteins associated with set1 protein spp1)	positive regulation of DNA-templated transcription [GO:0045893]; subtelomeric heterochromatin formation [GO:0031509]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN010636	Chromosome_4A	7763	8	269	39.00553909571042	0.9112730960550645	0.5857242132433237	267	0	0.3715745471435207	66	0	0.6439393939393939	201	0	0.6718346253229974	51	0	unmethylated (<10%)	Q9QXF7	Cytochrome P450 2J4 (EC 1.14.14.1) (CYPIIJ4)	arachidonate metabolic process [GO:0019369]; epoxygenase P450 pathway [GO:0019373]; female pregnancy [GO:0007565]; icosanoid metabolic process [GO:0006690]; linoleic acid metabolic process [GO:0043651]; negative regulation of collagen biosynthetic process [GO:0032966]; negative regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035359]; positive regulation of extracellular matrix organization [GO:1903055]; positive regulation of gluconeogenesis [GO:0045722]; positive regulation of tumor necrosis factor production [GO:0032760]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN010637	Chromosome_4A	1495	2	3	49.63210702341137	0.03258500435919791	0	3	0	0	3	0	NA	NA	NA	0.49575070821529743	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010638	Chromosome_4A	8656	8	161	33.78003696857671	0.6537678475259749	0.476313079299691	156	0	0.7656967840735069	51	0	0.3787226717163023	105	0	0.5774783445620789	69	0	unmethylated (<10%)	P05180	Cytochrome P450 2H1 (EC 1.14.14.1) (CYPIIH1) (Cytochrome P450 PB15) (Cytochrome P450 PCHP3)	epoxygenase P450 pathway [GO:0019373]; response to xenobiotic stimulus [GO:0009410]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN010639	Chromosome_4A	28647	20	392	35.179949034802945	0.44262532352540523	83.64158039626226	391	0.8849104859335039	84.1577958672511	25	0.92	83.60750599322147	366	0.8825136612021858	76.14525139664805	67	0.7611940298507462	methylated (>=50%)	O93257	DNA repair protein Ku70 (EC 4.2.99.18) (EC 5.6.2.4) (5'-deoxyribose-5-phosphate lyase Ku70) (5'-dRP/AP lyase Ku70) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit) (DNA repair protein XRCC6) (Ku autoantigen protein p70 homolog) (Ku70) (X-ray repair cross-complementing protein 5)	cellular response to gamma radiation [GO:0071480]; double-strand break repair via nonhomologous end joining [GO:0006303]; negative regulation of DNA-templated transcription [GO:0045892]; telomere maintenance [GO:0000723]	hit with GO BP
GN010640	Chromosome_4A	207	1	5	42.028985507246375	0.5476190476190477	0	5	0	0	5	0	NA	NA	NA	1.3732394366197183	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010641	Chromosome_4A	1365	1	27	41.0989010989011	0.4690721649484536	1.3961605584642234	27	0	1.3961605584642234	27	0	NA	NA	NA	1.365328920148945	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010642	Chromosome_4A	1497	1	24	41.616566466265866	0.37118770146293084	3.3398821218074657	18	0	3.3398821218074657	18	0	NA	NA	NA	0.3656307129798903	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010643	Chromosome_4A	810	1	37	44.32098765432099	1.4354823258932847	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010644	Chromosome_4A	342	1	7	46.78362573099415	0.3755294117647059	92.2279792746114	7	1	92.2279792746114	7	1	NA	NA	NA	78.41269841269842	16	0.8125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010645	Chromosome_4A	1756	2	26	34.96583143507973	0.48715322236449	11.671686746987952	26	0.11538461538461539	2.512562814070352	24	0.041666666666666664	93.28358208955224	2	1	1.3671875	39	0	sparse (10-50%)	P97441	Probable proton-coupled zinc antiporter SLC30A3 (Solute carrier family 30 member 3) (Zinc transporter 3) (ZnT-3)	detoxification of zinc ion [GO:0010312]; positive regulation of transport [GO:0051050]; response to zinc ion [GO:0010043]; zinc ion import into lysosome [GO:0140916]; zinc ion import into synaptic vesicle [GO:0099180]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN010646	Chromosome_4A	12730	8	282	35.28672427336999	0.711643073490222	1.214240305149396	282	0	0.5445227418321589	80	0	1.3800761421319796	202	0	1.6328999092833383	59	0	unmethylated (<10%)	Q9ULF5	Zinc transporter ZIP10 (Solute carrier family 39 member 10) (Zrt- and Irt-like protein 10) (ZIP-10)	epithelial to mesenchymal transition [GO:0001837]; intracellular monoatomic cation homeostasis [GO:0030003]; zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN001499	Chromosome_4A	756	1	36	46.42857142857143	0.8983957219251337	NA	0	NA	NA	NA	NA	NA	NA	NA	77.29658792650919	28	0.9285714285714286	NA	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN010647	Chromosome_4A	48315	31	494	36.179240401531615	0.31778491824693617	85.46630360789653	478	0.9602510460251046	91.01096224116931	78	0.9743589743589743	84.65955410626307	400	0.9575	88.3313885647608	9	1	methylated (>=50%)	A7T1N0	Transient receptor potential cation channel subfamily M member-like 2 (nvTRPM2)	calcium ion transmembrane transport [GO:0070588]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN010648	Chromosome_4A	606	1	26	42.40924092409241	0.984380857178558	0.45871559633027525	26	0	0.45871559633027525	26	0	NA	NA	NA	0.28912179255511383	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010649	Chromosome_4A	603	1	32	46.434494195688224	0.9959225806451613	0.6230529595015576	32	0	0.6230529595015576	32	0	NA	NA	NA	0.47337278106508873	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010650	Chromosome_4A	303	1	8	39.273927392739274	0.7989452867501649	2.8875379939209727	8	0	2.8875379939209727	8	0	NA	NA	NA	0.7314974182444062	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010651	Chromosome_4A	546	1	23	45.42124542124542	0.817578125	0.7058823529411765	23	0	0.7058823529411765	23	0	NA	NA	NA	0.4095309009679821	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010652	Chromosome_4A	552	1	9	39.67391304347826	0.4150375939849624	0.3929273084479371	9	0	0.3929273084479371	9	0	NA	NA	NA	0.9608785175017158	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010653	Chromosome_4A	12590	16	361	36.74344718030183	0.8497899079139828	0.5692239580039213	359	0	0.6726825266611977	149	0	0.5043227665706052	210	0	2.875658161198866	51	0	unmethylated (<10%)	Q24292	Protein dachsous (Adherin)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc morphogenesis [GO:0007560]; negative regulation of hippo signaling [GO:0035331]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]	hit with GO BP
GN010654	Chromosome_4A	873	1	1	48.22451317296678	0.020183104452767373	2.272727272727273	1	0	2.272727272727273	1	0	NA	NA	NA	0.5844845908607864	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010655	Chromosome_4A	20301	11	518	34.76183439239446	0.8450385260536023	0.5706942817188858	500	0	0.4769475357710652	52	0	0.5805454621392474	448	0	0.8056872037914692	55	0	unmethylated (<10%)	Q5ZID0	NmrA-like family domain-containing protein 1	NA	hit, no GO BP
GN010656	Chromosome_4A	564	1	21	42.730496453900706	0.8207900207900208	1.1220196353436185	21	0	1.1220196353436185	21	0	NA	NA	NA	0.695364238410596	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010657	Chromosome_4A	330	1	16	43.63636363636363	1.023454157782516	0.6814310051107325	16	0	0.6814310051107325	16	0	NA	NA	NA	0.709891150023663	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010658	Chromosome_4A	363	1	17	43.25068870523416	1.0063600782778865	0.635593220338983	17	0	0.635593220338983	17	0	NA	NA	NA	15.468243372115202	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010659	Chromosome_4A	759	1	36	42.95125164690382	1.0293851717902351	0.7468259895444361	36	0	0.7468259895444361	36	0	NA	NA	NA	0.5798782255726298	80	0	unmethylated (<10%)	Q63ZI0	Potassium channel subfamily K member 9	potassium ion import across plasma membrane [GO:1990573]; stabilization of membrane potential [GO:0030322]	hit with GO BP
GN010660	Chromosome_4A	3855	4	103	37.25032425421531	0.770814405851795	0.5280073461891643	103	0	0.7800312012480499	32	0	0.4229017566688354	71	0	0.4543577034283354	44	0	unmethylated (<10%)	Q9I7U4	Titin (D-Titin) (Kettin)	mesoderm development [GO:0007498]; mitotic chromosome condensation [GO:0007076]; myoblast fusion [GO:0007520]; regulation of hemocyte proliferation [GO:0035206]; sarcomere organization [GO:0045214]; sister chromatid cohesion [GO:0007062]; somatic muscle development [GO:0007525]; visceral muscle development [GO:0007522]	hit with GO BP
GN010661	Chromosome_4A	1739	2	42	34.15756181713628	0.8284709618874773	0.4449838187702265	42	0	0.3424657534246575	13	0	0.4766949152542373	29	0	0.9033423667570009	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010662	Chromosome_4A	16637	9	135	36.86361723868486	0.24018228657040105	91.37388568432092	131	0.9923664122137404	92.48747913188647	27	1	91.16640746500778	104	0.9903846153846154	61.508951406649615	28	0.6785714285714286	methylated (>=50%)	Q7NBW0	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN010663	Chromosome_4A	318	1	14	40.880503144654085	1.0537278106508876	0.6944444444444444	14	0	0.6944444444444444	14	0	NA	NA	NA	0.8157211716722284	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010664	Chromosome_4A	3196	6	21	32.32165206508135	0.25346687211093993	93.17617866004963	21	1	94.57364341085271	3	1	93.0546190155091	18	1	84.3313373253493	24	1	methylated (>=50%)	Q5TZ51	Mitochondrial inner membrane protein Mpv17 (Protein Mpv17)	developmental pigmentation [GO:0048066]; iridophore differentiation [GO:0050935]; liver development [GO:0001889]; regulation of mitochondrion organization [GO:0010821]; regulation of skeletal muscle fiber development [GO:0048742]; regulation of triglyceride metabolic process [GO:0090207]	hit with GO BP
GN010665	Chromosome_4A	50534	42	613	34.434242292318046	0.40965696418407527	80.50259365994236	612	0.8758169934640523	89.55777921239509	128	0.890625	78.99351784609591	484	0.871900826446281	1.4012303485987696	59	0	methylated (>=50%)	Q4H4B6	Protein scribble homolog (Scribble1)	activation of GTPase activity [GO:0090630]; anterior/posterior axon guidance [GO:0033564]; apoptotic process involved in morphogenesis [GO:0060561]; cell migration [GO:0016477]; cell population proliferation [GO:0008283]; cell-cell adhesion [GO:0098609]; commissural neuron axon guidance [GO:0071679]; convergent extension involved in gastrulation [GO:0060027]; establishment of apical/basal cell polarity [GO:0035089]; establishment of mitotic spindle orientation [GO:0000132]; establishment of planar polarity [GO:0001736]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; motor neuron migration [GO:0097475]; negative regulation of mitotic cell cycle [GO:0045930]; neural tube formation [GO:0001841]; neuromast development [GO:0048884]; neuron migration [GO:0001764]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; positive chemotaxis [GO:0050918]; positive regulation of apoptotic process [GO:0043065]; receptor clustering [GO:0043113]; vasculature development [GO:0001944]	hit with GO BP
GN010666	Chromosome_4A	1248	1	62	54.7275641025641	0.6643655659162331	5.907626208378088	56	0	5.907626208378088	56	0	NA	NA	NA	10.159817351598173	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010667	Chromosome_4A	19708	9	233	33.75786482646641	0.4155869496710484	47.22222222222222	222	0.6576576576576577	62.52465483234714	18	0.5555555555555556	46.506046339887384	204	0.6666666666666666	77.69389155799588	38	0.8421052631578947	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010668	Chromosome_4A	2807	2	48	37.406483790523694	0.4966877896110503	89.90600735594606	48	0.9791666666666666	92.86675639300135	33	1	85.32778355879293	15	0.9333333333333333	89.53168044077135	39	1	methylated (>=50%)	Q0V9W6	BTB/POZ domain-containing protein 6	NA	hit, no GO BP
GN010669	Chromosome_4A	13236	7	226	34.67059534602599	0.5765566147380692	86.47099289153864	225	0.9333333333333333	70.02477291494633	18	0.8333333333333334	87.69789934084889	207	0.9420289855072463	70.14388489208633	49	0.6938775510204082	methylated (>=50%)	Q7ZV80	Survival of motor neuron-related-splicing factor 30 (Survival motor neuron domain-containing protein 1)	mRNA processing [GO:0006397]	hit with GO BP
GN010670	Chromosome_4A	18598	15	231	33.48747177115819	0.4458430672436565	86.7796816879078	227	0.9515418502202643	74.56828885400314	23	0.8260869565217391	87.80826446280992	204	0.9656862745098039	46.078184110970994	54	0.5925925925925926	methylated (>=50%)	Q5RID7	Sorting nexin-17	endocytic recycling [GO:0032456]; intracellular protein transport [GO:0006886]; signal transduction [GO:0007165]	hit with GO BP
GN010671	Chromosome_4A	6314	4	85	35.17579980994615	0.43586628312101344	84.63855421686748	82	0.975609756097561	94.48275862068965	13	1	82.81927096609738	69	0.9710144927536232	92.73504273504274	14	0.9285714285714286	methylated (>=50%)	Q8BH00	2-aminomuconic semialdehyde dehydrogenase (EC 1.2.1.32) (Aldehyde dehydrogenase family 8 member A1) (Retinal dehydrogenase 4)	9-cis-retinoic acid biosynthetic process [GO:0042904]; retinal metabolic process [GO:0042574]; retinoic acid metabolic process [GO:0042573]	hit with GO BP
GN010672	Chromosome_4A	719	2	17	38.80389429763561	0.6281735019015315	0.5602240896358543	17	0	0.6036217303822937	14	0	0.4608294930875576	3	0	0.718803910293272	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010673	Chromosome_4A	1080	1	38	39.81481481481482	0.8881386742842303	0.672645739910314	29	0	0.672645739910314	29	0	NA	NA	NA	0.5094614264919942	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010674	Chromosome_4A	807	1	35	38.166047087980175	1.2074640902872777	0.6471389645776566	35	0	0.6471389645776566	35	0	NA	NA	NA	0.2905100064557779	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010675	Chromosome_4A	333	1	22	56.75675675675676	0.8222222222222222	0.6561679790026247	22	0	0.6561679790026247	22	0	NA	NA	NA	0.8453410182516811	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010676	Chromosome_4A	1179	3	23	37.913486005089055	0.5428611467008329	0.6674757281553398	23	0	0.7260726072607261	21	0	0	2	0	0.6583760058522312	65	0	unmethylated (<10%)	Q28260	Vascular cell adhesion protein 1 (V-CAM 1) (VCAM-1) (CD antigen CD106) [Cleaved into: Soluble Vascular Cell Adhesion Molecule-1]	cell adhesion [GO:0007155]; cell-cell adhesion [GO:0098609]	hit with GO BP
GN003574	Chromosome_4A	1252	1	31	44.329073482428115	0.5144341648331257	0.2881844380403458	31	0	0.2881844380403458	31	0	NA	NA	NA	0.7057163020465773	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012467	Chromosome_4A	1140	1	35	46.92982456140351	0.5619401723846544	0.7518796992481203	35	0	0.7518796992481203	35	0	NA	NA	NA	1.2283464566929134	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010678	Chromosome_4A	423	1	10	44.917257683215134	0.4952581664910432	3.8781163434903045	10	0	3.8781163434903045	10	0	NA	NA	NA	0.4659832246039143	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010679	Chromosome_4A	399	1	8	38.59649122807018	0.5476067936181163	0.8187134502923976	8	0	0.8187134502923976	8	0	NA	NA	NA	0.6123016977456165	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010680	Chromosome_4A	396	1	23	55.303030303030305	0.7631975867269984	0.8358662613981763	23	0	0.8358662613981763	23	0	NA	NA	NA	0.6375027478566718	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010681	Chromosome_4A	25085	12	434	35.16444090093682	0.563450311223141	81.53613654547071	300	0.8866666666666667	88.45299777942265	21	0.9047619047619048	81.0942450465787	279	0.8853046594982079	48.11443433029909	39	0.6666666666666666	methylated (>=50%)	Q8IV38	Ankyrin repeat and MYND domain-containing protein 2	NA	hit, no GO BP
GN010682	Chromosome_4A	2538	3	38	36.3672182821119	0.4540036717977687	86.71586715867159	38	0.9736842105263158	91.47465437788019	10	1	85.6857855361596	28	0.9642857142857143	90.50942079553384	26	1	methylated (>=50%)	Q6IRP4	Protein ABHD13 (EC 3.-.-.-) (Alpha/beta hydrolase domain-containing protein 13) (Abhydrolase domain-containing protein 13)	NA	hit, no GO BP
GN010683	Chromosome_4A	19009	17	245	34.836130254090165	0.4265214707520075	86.24823220418884	245	0.9591836734693877	89.11609498680738	58	0.9655172413793104	85.51239739358552	187	0.9572192513368984	74.22802850356294	16	0.8125	methylated (>=50%)	O08561	Phosphatidylinositol 4-kinase beta (PI4K-beta) (PI4Kbeta) (PtdIns 4-kinase beta) (EC 2.7.1.67)	inner ear development [GO:0048839]; lysosome organization [GO:0007040]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; phosphatidylinositol-mediated signaling [GO:0048015]	hit with GO BP
GN010684	Chromosome_4A	15921	11	158	37.27152817034106	0.28606610462177395	81.41742963716514	146	0.952054794520548	93.65671641791045	46	1	78.69871529216742	100	0.93	90.83691696989746	46	1	methylated (>=50%)	Q8CHH5	BRD4-interacting chromatin-remodeling complex-associated protein-like	chromatin remodeling [GO:0006338]; negative regulation of cell differentiation [GO:0045596]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of stem cell population maintenance [GO:1902459]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010685	Chromosome_4A	1743	1	69	41.36546184738956	0.9255009696186167	0.8956386292834891	69	0	0.8956386292834891	69	0	NA	NA	NA	1.2048192771084338	35	0	unmethylated (<10%)	Q9BEG8	Sulfate transporter (Solute carrier family 26 member 2)	chloride transmembrane transport [GO:1902476]; chondrocyte differentiation [GO:0002062]; chondrocyte proliferation [GO:0035988]; sulfate transmembrane transport [GO:1902358]	hit with GO BP
GN010686	Chromosome_4A	387	1	18	43.41085271317829	1.0014376078205864	0.3129890453834116	18	0	0.3129890453834116	18	0	NA	NA	NA	1.3183915622940012	44	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010687	Chromosome_4A	674	2	24	37.68545994065282	1.0039098864271085	0.8458646616541353	24	0	0.5471956224350205	17	0	1.5015015015015014	7	0	0.45916693998032143	53	0	unmethylated (<10%)	P43679	Neuronal acetylcholine receptor subunit beta-3	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010688	Chromosome_4A	1128	1	40	37.322695035460995	1.0183262616231832	1.0491803278688525	40	0	1.0491803278688525	40	0	NA	NA	NA	8.795860771401694	36	0	unmethylated (<10%)	P54131	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010689	Chromosome_4A	1160	2	28	44.56896551724138	0.4865917602996255	43.462321792260695	28	0.39285714285714285	43.114311431143115	27	0.4074074074074074	46.78111587982833	1	0	52.05357142857143	23	0.6521739130434783	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010690	Chromosome_4A	10549	6	183	37.47274623187032	0.49484562244466374	75.56199144945525	160	0.8625	37.75773195876289	12	0.3333333333333333	80.0926640926641	148	0.9054054054054054	33.45558272208639	55	0.21818181818181817	methylated (>=50%)	P53809	Phosphatidylcholine transfer protein (PC-TP) (START domain-containing protein 2) (StARD2) (StAR-related lipid transfer protein 2)	cholesterol metabolic process [GO:0008203]; negative regulation of cold-induced thermogenesis [GO:0120163]; phospholipid transport [GO:0015914]	hit with GO BP
GN010691	Chromosome_4A	65751	27	1457	33.97514866694043	0.7714394377019972	1.542125554283609	1449	0.002070393374741201	0.3628666465074085	134	0	1.654536283058298	1315	0.0022813688212927757	1.1615044247787611	23	0	unmethylated (<10%)	A7T1N0	Transient receptor potential cation channel subfamily M member-like 2 (nvTRPM2)	calcium ion transmembrane transport [GO:0070588]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN010692	Chromosome_4A	6822	5	185	36.997947815889766	0.7928556485947068	0.5806053119209389	185	0	0.7707129094412332	20	0	0.5526427660478958	165	0	2.6024955436720143	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010693	Chromosome_4A	315	1	4	43.17460317460318	0.2845528455284553	0.5681818181818182	4	0	0.5681818181818182	4	0	NA	NA	NA	11.578449905482042	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010694	Chromosome_4A	345	1	3	39.710144927536234	0.2359781121751026	0	1	0	0	1	0	NA	NA	NA	29.93006993006993	27	0.14814814814814814	NA	NA	NA	NA	no Swiss-Prot hit
GN010695	Chromosome_4A	216	1	4	49.074074074074076	0.3103448275862069	0	2	0	0	2	0	NA	NA	NA	0.45871559633027525	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010696	Chromosome_4A	417	1	6	45.08393285371702	0.2843181818181818	1.1764705882352942	6	0	1.1764705882352942	6	0	NA	NA	NA	0.8763837638376384	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010697	Chromosome_4A	261	2	7	39.08045977011494	0.7092391304347826	1.1406844106463878	7	0	1.1406844106463878	7	0	NA	NA	NA	0.594421582075903	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010698	Chromosome_4A	421	2	4	49.8812351543943	0.1559259259259259	1.2345679012345678	4	0	1.2345679012345678	4	0	NA	NA	NA	0.8633980881899476	83	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010699	Chromosome_4A	948	3	25	41.561181434599156	0.6137829228498174	9.927942353883106	25	0	11.070780399274048	23	0	1.3605442176870748	2	0	1.8271604938271604	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010700	Chromosome_4A	3434	6	134	40.53581828771112	0.97471059850242	51.70613462614209	134	0.3805970149253731	61.27641224665804	66	0.5151515151515151	44.415243101182654	68	0.25	18.63404140898091	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010701	Chromosome_4A	4221	4	41	35.01539919450367	0.31823389118030515	72.18649517684888	40	0.85	77.19298245614036	3	1	71.81700474751834	37	0.8378378378378378	82.86352218811052	41	0.975609756097561	methylated (>=50%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN010702	Chromosome_4A	40975	30	706	36.71507016473459	0.511932594186503	78.5585254584979	681	0.9456681350954479	84.24579412603364	157	0.9681528662420382	77.00315826412447	524	0.9389312977099237	79.14303717706365	37	0.972972972972973	methylated (>=50%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN010703	Chromosome_4A	21516	15	355	35.805911879531514	0.5173735680357642	81.20652755484217	354	0.923728813559322	88.17635270541082	24	1	80.70804070517414	330	0.9181818181818182	1.2012012012012012	43	0	methylated (>=50%)	Q9ULA0	Aspartyl aminopeptidase (EC 3.4.11.21)	peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]	hit with GO BP
GN010704	Chromosome_4A	23877	7	399	36.340411274448215	0.5104935210684367	82.11716876889399	320	0.8625	66.17647058823529	25	0.72	83.26813457024701	295	0.8745762711864407	31.014904187366927	24	0.375	methylated (>=50%)	Q6GL69	MKI67 FHA domain-interacting nucleolar phosphoprotein-like	NA	hit, no GO BP
GN010705	Chromosome_4A	4472	7	41	35.77817531305904	0.2871699773994133	67	41	0.7560975609756098	52.787834902244754	27	0.6666666666666666	86.26104023552503	14	0.9285714285714286	54.51913798649083	56	0.5714285714285714	methylated (>=50%)	Q8T773	Putative malate dehydrogenase 1B (EC 1.1.1.-)	malate metabolic process [GO:0006108]; NAD+ metabolic process [GO:0019674]; oxaloacetate metabolic process [GO:0006107]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN010706	Chromosome_4A	10104	5	163	35.13460015835313	0.5250983272883094	81.21655871585469	162	0.8950617283950617	61.16504854368932	19	0.7894736842105263	83.12769895126465	143	0.9090909090909091	0.4448838358872961	32	0	methylated (>=50%)	O16053	Protein CDV3 homolog (Protein anon-2C9)	NA	hit, no GO BP
GN010707	Chromosome_4A	1176	1	31	50.17006802721088	0.4512774806892454	84.56375838926175	31	0.967741935483871	84.56375838926175	31	0.967741935483871	NA	NA	NA	50.742574257425744	7	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010708	Chromosome_4A	26341	12	278	35.96674385938271	0.3384207998615778	79.78491498328731	264	0.8977272727272727	88.52802514405448	35	0.9714285714285714	78.3767822492196	229	0.8864628820960698	34.87833140208575	49	0.32653061224489793	methylated (>=50%)	P41562	Isocitrate dehydrogenase [NADP] cytoplasmic (IDH) (IDH1) (EC 1.1.1.42) (Cytosolic NADP-isocitrate dehydrogenase) (IDPc) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)	2-oxoglutarate metabolic process [GO:0006103]; female gonad development [GO:0008585]; glutathione metabolic process [GO:0006749]; isocitrate metabolic process [GO:0006102]; NADPH regeneration [GO:0006740]; regulation of phospholipid biosynthetic process [GO:0071071]; regulation of phospholipid catabolic process [GO:0060696]; response to oxidative stress [GO:0006979]; response to steroid hormone [GO:0048545]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN010709	Chromosome_4A	25083	19	359	36.666267990272296	0.42632897620505156	85.64740376430531	353	0.9405099150141643	83.75474083438685	34	0.9411764705882353	85.8004498057657	319	0.9404388714733543	0.5717008099094807	30	0	methylated (>=50%)	Q71SY5	Mediator of RNA polymerase II transcription subunit 25 (Activator interaction domain-containing protein 1) (Activator-recruited cofactor 92 kDa component) (ARC92) (Mediator complex subunit 25) (p78)	negative regulation of fibroblast proliferation [GO:0048147]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of chromatin binding [GO:0035563]; positive regulation of mediator complex assembly [GO:2001178]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN010710	Chromosome_4A	18629	12	308	36.6364270760642	0.49690782111245	80.08617594254937	282	0.8794326241134752	94.73081328751432	17	1	79.10665032178976	265	0.8716981132075472	2.393939393939394	54	0	methylated (>=50%)	Q60HH8	Aldehyde dehydrogenase family 3 member A2 (EC 1.2.1.3) (EC 1.2.1.94) (Fatty aldehyde dehydrogenase)	hexadecanal metabolic process [GO:0046458]	hit with GO BP
GN010711	Chromosome_4A	897	2	29	38.684503901895205	0.865369261477046	0.8957654723127035	29	0	0.9603841536614646	23	0	0.759493670886076	6	0	1.1265164644714039	31	0	unmethylated (<10%)	Q9UGM1	Neuronal acetylcholine receptor subunit alpha-9 (Nicotinic acetylcholine receptor subunit alpha-9) (NACHR alpha-9)	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; regulation of membrane potential [GO:0042391]; response to auditory stimulus [GO:0010996]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010712	Chromosome_4A	6451	5	156	35.09533405673539	0.7854620723243638	0.4885381435550545	112	0	0.8771929824561403	16	0	0.40816326530612246	96	0	0.46296296296296297	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010713	Chromosome_4A	3869	4	87	33.41948823985526	0.8055555555555556	0.5784805244890089	73	0	0.6928406466512702	11	0	0.5555555555555556	62	0	0.6279434850863422	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010714	Chromosome_4A	3941	2	84	35.98071555442781	0.6588923719958203	0.5735260380821289	84	0	1.639344262295082	1	0	0.5583992554676593	83	0	0.5717397222978492	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010715	Chromosome_4A	6558	5	178	36.88624580664837	0.7989437978925237	0.5883059190779205	173	0	0.26833631484794274	26	0	0.6379142976008876	147	0	0.6550218340611353	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010716	Chromosome_4A	3932	5	110	36.54628687690742	0.8383210320659927	1.0642135642135642	110	0	0.4655493482309125	24	0	1.2080536912751678	86	0	0.49217002237136465	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010717	Chromosome_4A	18075	8	522	38.54495159059474	0.7781907167900948	2.980375695246091	499	0.004008016032064128	0.28708133971291866	27	0	3.1366235496585797	472	0.00423728813559322	0.6024096385542169	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010718	Chromosome_4A	5194	5	129	37.042741624951866	0.7242584745762712	0.8367564278107409	129	0	0.7412898443291327	25	0	0.8614088820826953	104	0	1.1103151862464182	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010719	Chromosome_4A	624	1	32	45.51282051282051	0.9952153110047847	0.31695721077654515	30	0	0.31695721077654515	30	0	NA	NA	NA	0.7246376811594203	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010720	Chromosome_4A	1347	1	43	41.72234595397179	0.7627607458912768	0.495458298926507	43	0	0.495458298926507	43	0	NA	NA	NA	0.382262996941896	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010721	Chromosome_4A	1179	1	54	39.864291772688716	1.1575636363636364	0.11428571428571428	54	0	0.11428571428571428	54	0	NA	NA	NA	0.29779630732578916	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010722	Chromosome_4A	2890	2	72	36.43598615916955	0.7517829916685334	0.450070323488045	72	0	0.39564787339268054	48	0	0.5218525766470972	24	0	0.6457564575645757	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010723	Chromosome_4A	2741	2	83	35.75337468077344	0.9475343606830487	0.5215123859191656	83	0	0	8	0	0.5818181818181818	75	0	0.5188815220524647	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010724	Chromosome_4A	1080	4	28	35	0.8534657936328742	0.27586206896551724	28	0	0.32362459546925565	18	0	0.19120458891013384	10	0	0.5842696629213483	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003310	Chromosome_4A	498	1	18	48.99598393574297	0.6063311688311688	1.3215859030837005	10	0	1.3215859030837005	10	0	NA	NA	NA	4.756980351602896	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010725	Chromosome_4A	3340	2	81	35.02994011976048	0.7916521576281453	0.35484586382789973	80	0	0.468384074941452	38	0	0.28561228132809713	42	0	0.5269100489273617	65	0	unmethylated (<10%)	Q9DGD1	Alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase (EC 2.4.1.201) (MGAT6) (N-acetylglucosaminyltransferase VI) (GlcNAc-TVI) (GnT-VI) (N-glycan branching N-acetylglucosaminyltransferase VI)	protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN010726	Chromosome_4A	19155	17	292	35.86530931871574	0.47423315874371785	78.66788044302837	216	0.875	85.09708737864078	40	0.95	77.4770724689804	176	0.8579545454545454	58.469055374592834	16	0.5	methylated (>=50%)	P10895	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 (EC 3.1.4.11) (Phosphoinositide phospholipase C-delta-1) (Phospholipase C-III) (PLC-III) (Phospholipase C-delta-1) (PLC-delta-1)	intracellular signal transduction [GO:0035556]; lipid metabolic process [GO:0006629]; phosphatidylinositol metabolic process [GO:0046488]	hit with GO BP
GN010727	Chromosome_4A	20069	5	289	34.510937266430815	0.4878538711388181	56.352836352836356	288	0.6145833333333334	67.97004991680532	18	0.6111111111111112	55.45960468240261	270	0.6148148148148148	0.7824726134585289	48	0	methylated (>=50%)	Q15111	Inactive phospholipase C-like protein 1 (PLC-L1) (Phospholipase C-deleted in lung carcinoma) (Phospholipase C-related but catalytically inactive protein) (PRIP)	gamma-aminobutyric acid signaling pathway [GO:0007214]; intracellular signal transduction [GO:0035556]; lipid metabolic process [GO:0006629]; negative regulation of cold-induced thermogenesis [GO:0120163]; phosphatidylinositol metabolic process [GO:0046488]; phosphatidylinositol-mediated signaling [GO:0048015]; regulation of synaptic transmission, GABAergic [GO:0032228]; release of sequestered calcium ion into cytosol [GO:0051209]	hit with GO BP
GN010728	Chromosome_4A	21123	15	285	36.90763622591488	0.3994223291231154	85.16337754771918	243	0.9135802469135802	94.03590040532715	28	1	84.0472027972028	215	0.9023255813953488	87.81538461538462	30	0.9666666666666667	methylated (>=50%)	Q93YS4	ABC transporter G family member 22 (ABC transporter ABCG.22) (AtABCG22) (White-brown complex homolog protein 23) (AtWBC23)	response to water deprivation [GO:0009414]; transpiration [GO:0010148]	hit with GO BP
GN010729	Chromosome_4A	14958	17	251	35.67990373044525	0.5275256389180439	73.15384615384616	238	0.8823529411764706	72.4823870700373	38	0.8157894736842105	73.25647684803953	200	0.895	53.92210641799232	31	0.4838709677419355	methylated (>=50%)	D3YV10	Coiled-coil domain-containing protein 13	axoneme assembly [GO:0035082]; cytoplasmic microtubule organization [GO:0031122]; DNA damage response [GO:0006974]; non-motile cilium assembly [GO:1905515]	hit with GO BP
GN010730	Chromosome_4A	4140	2	61	33.067632850241544	0.5395761846361589	80.50745066451873	61	0.8032786885245902	69.64586846543001	12	0.6666666666666666	81.98033386691058	49	0.8367346938775511	17.272727272727273	23	0.391304347826087	methylated (>=50%)	O35165	Golgi SNAP receptor complex member 2 (27 kDa Golgi SNARE protein) (Membrin)	intra-Golgi vesicle-mediated transport [GO:0006891]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN010731	Chromosome_4A	363	1	9	48.484848484848484	0.42274844720496896	0.5319148936170213	9	0	0.5319148936170213	9	0	NA	NA	NA	1.1173184357541899	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010732	Chromosome_4A	10157	6	157	41.25233828886482	0.36341664965031395	1.384019191732792	146	0	0.5112474437627812	23	0	1.5762215717180814	123	0	1.1850501367365542	63	0	unmethylated (<10%)	Q8BHW9	Schlafen-like protein 1	NA	hit, no GO BP
GN010733	Chromosome_4A	14014	4	353	38.504352790067074	0.6797884180119796	1.01359133840129	340	0	0.7677543186180422	12	0	1.0238361862102063	328	0	0.7575757575757576	63	0	unmethylated (<10%)	O15442	Metallophosphoesterase domain-containing protein 1 (EC 3.1.-.-) (Adult brain protein 239) (239AB)	NA	hit, no GO BP
GN010734	Chromosome_4A	12926	14	187	33.498375367476406	0.5167940392005944	85.030353200883	185	0.9567567567567568	83.46774193548387	21	0.9523809523809523	85.17652383826191	164	0.9573170731707317	1.6	9	0	methylated (>=50%)	Q9NSN8	Gamma-1-syntrophin (G1SYN) (Syntrophin-4) (SYN4)	cell communication [GO:0007154]; synaptic signaling [GO:0099536]	hit with GO BP
GN010735	Chromosome_4A	3979	11	45	35.611962804724804	0.35679698708751795	72.71235125153878	44	0.7954545454545454	76.78460583488517	30	0.8666666666666667	64.76997578692495	14	0.6428571428571429	0	7	0	methylated (>=50%)	Q5JVL4	EF-hand domain-containing protein 1 (Myoclonin-1)	cerebral cortex cell migration [GO:0021795]; cilium-dependent cell motility [GO:0060285]; flagellated sperm motility [GO:0030317]; mitotic cytokinesis [GO:0000281]; mitotic spindle organization [GO:0007052]; regulation of cell division [GO:0051302]	hit with GO BP
GN010736	Chromosome_4A	737	3	16	38.12754409769335	0.5973657548125634	74.32692307692308	16	0.9375	76.7203513909224	10	1	69.74789915966386	6	0.8333333333333334	6.290849673202614	54	0.037037037037037035	methylated (>=50%)	Q810W9	Whirlin (CASK-interacting protein CIP98)	auditory receptor cell stereocilium organization [GO:0060088]; cerebellar Purkinje cell layer formation [GO:0021694]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; establishment of protein localization [GO:0045184]; inner ear receptor cell stereocilium organization [GO:0060122]; paranodal junction maintenance [GO:1990227]; positive regulation of gene expression [GO:0010628]; retina homeostasis [GO:0001895]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN010737	Chromosome_4A	13823	9	177	34.753671417203215	0.42530799429277083	80.76576576576576	175	0.92	71.54105736782903	14	0.7857142857142857	81.425468586598015	161	0.9316770186335404	0.5054759898904801	27	0	methylated (>=50%)	P07943	Aldo-keto reductase family 1 member B1 (EC 1.1.1.21) (EC 1.1.1.300) (EC 1.1.1.372) (EC 1.1.1.54) (Aldehyde reductase) (Aldose reductase) (AR)	cellular hyperosmotic salinity response [GO:0071475]; cellular response to methylglyoxal [GO:0097238]; cellular response to peptide [GO:1901653]; D-sorbitol biosynthetic process [GO:0006061]; D-sorbitol metabolic process [GO:0006060]; daunorubicin metabolic process [GO:0044597]; doxorubicin metabolic process [GO:0044598]; epithelial cell maturation [GO:0002070]; fructose biosynthetic process [GO:0046370]; inner medullary collecting duct development [GO:0072061]; maternal process involved in female pregnancy [GO:0060135]; metanephric collecting duct development [GO:0072205]; monosaccharide metabolic process [GO:0005996]; negative regulation of apoptotic process [GO:0043066]; norepinephrine metabolic process [GO:0042415]; positive regulation of receptor signaling pathway via JAK-STAT [GO:0046427]; positive regulation of smooth muscle cell proliferation [GO:0048661]; regulation of urine volume [GO:0035809]; renal water homeostasis [GO:0003091]; response to thyroid hormone [GO:0097066]; retinoid metabolic process [GO:0001523]; stress-activated protein kinase signaling cascade [GO:0031098]; tissue homeostasis [GO:0001894]	hit with GO BP
GN010738	Chromosome_4A	939	1	35	42.91799787007455	0.8112411137440758	0.5244755244755245	35	0	0.5244755244755245	35	0	NA	NA	NA	1.4093739757456571	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010739	Chromosome_4A	814	3	25	36.85503685503686	0.9054505005561735	0.3463203463203463	25	0	0.43010752688172044	20	0	0	5	0	1.6842105263157894	48	0	unmethylated (<10%)	O02740	Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]; visual perception [GO:0007601]	hit with GO BP
GN010740	Chromosome_4A	3887	9	75	33.31618214561358	0.6980695184092564	0.951496867022511	75	0	1.1111111111111112	33	0	0.8636200071968334	42	0	0.7384376214535562	61	0	unmethylated (<10%)	P16065	Speract receptor (EC 4.6.1.2) (Guanylate cyclase)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN010741	Chromosome_4A	11155	9	232	33.47377857463021	0.743853057432782	1.5374231288435578	221	0	1.3778705636743216	45	0	1.5723557912057775	176	0	0.462198745460548	51	0	unmethylated (<10%)	P17342	Atrial natriuretic peptide receptor 3 (Atrial natriuretic peptide clearance receptor) (Atrial natriuretic peptide receptor type C) (ANP-C) (ANPR-C) (NPR-C)	negative regulation of cold-induced thermogenesis [GO:0120163]; osteoclast proliferation [GO:0002158]; positive regulation of relaxation of smooth muscle [GO:1901082]; positive regulation of urine volume [GO:0035810]; regulation of blood pressure [GO:0008217]; regulation of osteoblast proliferation [GO:0033688]; signal transduction [GO:0007165]; skeletal system development [GO:0001501]	hit with GO BP
GN010742	Chromosome_4A	12747	10	334	36.55762140111399	0.7843116954699093	0.9006657094374103	320	0	0.4838709677419355	38	0	0.9582528599019462	282	0	0.468384074941452	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010743	Chromosome_4A	17844	11	428	35.121049092131805	0.7782915729796626	0.7725694444444444	427	0	0.6352941176470588	109	0	0.8036189462480042	318	0	0.5867014341590613	52	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN010744	Chromosome_4A	3593	3	114	37.656554411355415	0.8983879104248459	0.6724101702038243	113	0	0.7079646017699115	30	0	0.6613392119041058	83	0	0.9970089730807578	37	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN010745	Chromosome_4A	4258	5	142	36.37858149365899	1.0081299186341204	0.7041351939572398	139	0	0.7475560667050029	35	0	0.691699604743083	104	0	0.6671608598962194	44	0	unmethylated (<10%)	Q6UX65	DNA damage-regulated autophagy modulator protein 2 (Transmembrane protein 77)	photoreceptor cell maintenance [GO:0045494]; regulation of autophagy [GO:0010506]; visual perception [GO:0007601]	hit with GO BP
GN010746	Chromosome_4A	561	1	11	41.889483065953655	0.4483435047951177	1.7094017094017093	6	0	1.7094017094017093	6	0	NA	NA	NA	1.5293118096856415	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010747	Chromosome_4A	636	1	13	40.880503144654085	0.49417249417249415	0.4	10	0	0.4	10	0	NA	NA	NA	1.6090104585679808	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010748	Chromosome_4A	1402	2	35	45.43509272467903	0.49380107072414764	1.3182674199623352	27	0	1.3182674199623352	27	0	NA	NA	NA	0	38	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN010749	Chromosome_4A	13235	11	251	38.6550812240272	0.5099398814699106	88.3024418946749	248	0.9919354838709677	95.05703422053232	65	1	86.91674939724862	183	0.9890710382513661	59.657534246575345	43	0.5348837209302325	methylated (>=50%)	Q17RS7	Flap endonuclease GEN homolog 1 (EC 3.1.-.-)	double-strand break repair via homologous recombination [GO:0000724]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; regulation of centrosome duplication [GO:0010824]; replication fork processing [GO:0031297]; resolution of DNA recombination intermediates [GO:0071139]; resolution of mitotic recombination intermediates [GO:0071140]	hit with GO BP
GN010750	Chromosome_4A	38553	30	593	36.02313698026094	0.47614305929467793	88.21942672750649	555	0.9819819819819819	96.73366834170854	107	1	86.82798064232293	448	0.9776785714285714	92.74012206874397	37	1	methylated (>=50%)	Q9UIG0	Tyrosine-protein kinase BAZ1B (EC 2.7.10.2) (Bromodomain adjacent to zinc finger domain protein 1B) (Williams syndrome transcription factor) (Williams-Beuren syndrome chromosomal region 10 protein) (Williams-Beuren syndrome chromosomal region 9 protein) (hWALp2)	chromatin remodeling [GO:0006338]; DNA damage response [GO:0006974]; negative regulation of mitotic chromosome condensation [GO:1905213]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription by RNA polymerase III [GO:0045945]; post-translational protein modification [GO:0043687]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010751	Chromosome_4A	2604	5	91	43.04915514592934	0.762299986488834	0.3025210084033613	91	0	0.2557544757033248	83	0	0.8403361344537815	8	0	1.1686143572621035	21	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN010752	Chromosome_4A	462	1	7	38.095238095238095	0.44823284823284826	1.675977653631285	7	0	1.675977653631285	7	0	NA	NA	NA	0.8810572687224669	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010753	Chromosome_4A	3157	2	123	37.75736458663288	1.09377218184891	0.6825938566552902	123	0	0.6869479882237488	20	0	0.6816773393926875	103	0	3.868698710433763	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010754	Chromosome_4A	357	1	14	46.49859943977591	0.74375	0.9922822491730982	14	0	0.9922822491730982	14	0	NA	NA	NA	0.7552351527634741	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010755	Chromosome_4A	39507	16	444	35.71772091021844	0.35341617820140986	82.19325754606037	411	0.9172749391727494	79.31785195936139	59	0.8135593220338984	82.64219351914797	352	0.9346590909090909	0.8512087163772557	65	0	methylated (>=50%)	P19468	Glutamate--cysteine ligase catalytic subunit (EC 6.3.2.2) (GCS heavy chain) (Gamma-ECS) (Gamma-glutamylcysteine synthetase)	blood vessel diameter maintenance [GO:0097746]; cell redox homeostasis [GO:0045454]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to follicle-stimulating hormone stimulus [GO:0071372]; cellular response to glucose stimulus [GO:0071333]; cellular response to hepatocyte growth factor stimulus [GO:0035729]; cellular response to insulin stimulus [GO:0032869]; cellular response to mechanical stimulus [GO:0071260]; cellular response to thyroxine stimulus [GO:0097069]; glutamate metabolic process [GO:0006536]; glutathione biosynthetic process [GO:0006750]; glutathione metabolic process [GO:0006749]; L-ascorbic acid metabolic process [GO:0019852]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; negative regulation of hepatic stellate cell activation [GO:2000490]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of protein ubiquitination [GO:0031397]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; regulation of mitochondrial depolarization [GO:0051900]; response to activity [GO:0014823]; response to arsenic-containing substance [GO:0046685]; response to auditory stimulus [GO:0010996]; response to cadmium ion [GO:0046686]; response to heat [GO:0009408]; response to hormone [GO:0009725]; response to human chorionic gonadotropin [GO:0044752]; response to interleukin-1 [GO:0070555]; response to nitrosative stress [GO:0051409]; response to nutrient [GO:0007584]; response to oxidative stress [GO:0006979]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN010756	Chromosome_4A	1029	1	45	46.06413994169096	0.8249158249158249	17.179215270413575	45	0	17.179215270413575	45	0	NA	NA	NA	25.04854368932039	16	0.1875	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010757	Chromosome_4A	1047	1	51	46.036294173829994	0.919496487119438	0.7121057985757884	48	0	0.7121057985757884	48	0	NA	NA	NA	0.8739495798319328	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010758	Chromosome_4A	1062	1	16	39.548022598870055	0.38531485974738655	80.88235294117646	16	1	80.88235294117646	16	1	NA	NA	NA	5.445729205520328	47	0.0425531914893617	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010759	Chromosome_4A	2180	3	86	40.77981651376147	0.9491504829792835	0.5936920222634509	83	0	0.6134969325153374	43	0	0.5751258087706685	40	0	1.9351935193519352	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010760	Chromosome_4A	1335	1	55	44.49438202247191	0.8324829931972789	0.3787878787878788	55	0	0.3787878787878788	55	0	NA	NA	NA	0.5740057400574006	39	0	unmethylated (<10%)	P11230	Acetylcholine receptor subunit beta	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic cation transport [GO:0006812]; monoatomic ion transmembrane transport [GO:0034220]; muscle cell development [GO:0055001]; muscle contraction [GO:0006936]; nervous system process [GO:0050877]; neuromuscular synaptic transmission [GO:0007274]; postsynaptic membrane organization [GO:0001941]; regulation of membrane potential [GO:0042391]; signal transduction [GO:0007165]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN010761	Chromosome_4A	3140	5	86	35.15923566878981	0.8932759516114627	4.7684234542550765	85	0	5.595667870036101	22	0	4.488549618320611	63	0	1.09026369168357	64	0	unmethylated (<10%)	Q96LR7	Ciliary microtubule inner protein 5	NA	hit, no GO BP
GN010762	Chromosome_4A	14828	10	148	34.29322902616671	0.3402380083429121	83.22777652114907	146	0.9383561643835616	88.04448563484708	24	0.9583333333333334	82.55828932113873	122	0.9344262295081968	0.6622516556291391	38	0	methylated (>=50%)	Q0VC00	Phospholipase ABHD3 (EC 3.1.1.32) (EC 3.1.1.4) (Abhydrolase domain-containing protein 3)	medium-chain fatty acid biosynthetic process [GO:0051792]; medium-chain fatty acid catabolic process [GO:0051793]; phosphatidylcholine metabolic process [GO:0046470]	hit with GO BP
GN010763	Chromosome_4A	12013	4	180	36.06093398817947	0.4632727666939973	92.48330092162003	163	0.9754601226993865	91.27988748241913	12	1	92.56027347966895	151	0.9735099337748344	80.2851076736427	37	1	methylated (>=50%)	O93310	Double-strand-break repair protein rad21 homolog (SCC1 homolog) [Cleaved into: 64-kDa C-terminal product (64-kDa carboxy-terminal product)]	protein localization to chromatin [GO:0071168]; replication-born double-strand break repair via sister chromatid exchange [GO:1990414]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN010764	Chromosome_4A	9389	4	133	35.86111406965598	0.44124795230550257	94.57509738854422	120	1	91.81184668989548	15	1	94.82460280006292	105	1	96.30411826821542	32	1	methylated (>=50%)	Q3SWX9	Double-strand-break repair protein rad21 homolog [Cleaved into: 64-kDa C-terminal product (64-kDa carboxy-terminal product)]	negative regulation of G2/M transition of mitotic cell cycle [GO:0010972]; negative regulation of mitotic metaphase/anaphase transition [GO:0045841]; positive regulation of sister chromatid cohesion [GO:0045876]; protein localization to chromatin [GO:0071168]; regulation of transcription by RNA polymerase II [GO:0006357]; replication-born double-strand break repair via sister chromatid exchange [GO:1990414]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN010765	Chromosome_4A	1347	1	3	49.96288047512992	0.05079185520361991	0	3	0	0	3	0	NA	NA	NA	2.5	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010766	Chromosome_4A	4502	6	111	37.29453576188361	0.7098283532479929	1.4144798064396054	110	0	1.7584994138335288	28	0	1.3495575221238938	82	0	0.9036144578313253	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010767	Chromosome_4A	15554	12	240	36.14504307573615	0.4745011678345012	81.53946039532535	235	0.8723404255319149	93.59320725588576	61	1	78.76852098305386	174	0.8275862068965517	0.6442376521116678	37	0	methylated (>=50%)	Q91880	Suppressor of hairless protein homolog (X-Su(H))	animal organ development [GO:0048513]; negative regulation of transcription by RNA polymerase II [GO:0000122]; Notch signaling pathway [GO:0007219]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription of Notch receptor target [GO:0007221]	hit with GO BP
GN010768	Chromosome_4A	22052	12	628	35.479775077090515	0.9058004324717474	1.1269640599602673	609	0	0.7936507936507936	77	0	1.1678358541827176	532	0	0.5819592628516004	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010769	Chromosome_4A	1079	2	40	40.222428174235404	0.9203932356641716	0.6480881399870383	40	0	0.8250825082508251	33	0	0	7	0	2.2150624244865083	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010770	Chromosome_4A	4551	4	136	36.01406284333114	0.927536753135818	0.6740196078431373	134	0	0.7252215954875101	80	0	0.6426099851705388	54	0	0.3885381253035454	77	0	unmethylated (<10%)	Q17895	Zinc finger protein mnm-2	positive regulation of axon guidance [GO:1902669]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010771	Chromosome_4A	486	1	6	41.97530864197531	0.2892857142857143	0.4098360655737705	6	0	0.4098360655737705	6	0	NA	NA	NA	0.761307657859382	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015702	Chromosome_4A	1388	1	21	37.53602305475504	0.44071486891045997	0.32858707557502737	21	0	0.32858707557502737	21	0	NA	NA	NA	0.4192073170731707	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016278	Chromosome_4A	999	1	27	40.94094094094094	0.6477976848071473	0.0880281690140845	27	0	0.0880281690140845	27	0	NA	NA	NA	0.36023054755043227	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010772	Chromosome_4A	9774	9	247	36.04460814405566	0.7780467760492705	1.042138649750793	243	0	0.3727865796831314	26	0	1.114234089540253	217	0	0.9305654974946314	61	0	unmethylated (<10%)	E7F5Q0	VWFA and cache domain-containing protein 1	cartilage morphogenesis [GO:0060536]	hit with GO BP
GN010773	Chromosome_4A	915	1	17	43.82513661202186	0.3870558375634518	0.5586592178770949	9	0	0.5586592178770949	9	0	NA	NA	NA	3.538241601143674	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010774	Chromosome_4A	381	1	9	42.78215223097113	0.5164156626506025	4.166666666666667	4	0	4.166666666666667	4	0	NA	NA	NA	0.9819967266775778	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010775	Chromosome_4A	459	1	23	59.91285403050109	0.6173684210526316	0.3424657534246575	20	0	0.3424657534246575	20	0	NA	NA	NA	1.2113055181695829	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010776	Chromosome_4A	1805	2	44	58.227146814404435	0.32704122811352143	1.195814648729447	40	0	1.2820512820512822	37	0	0	3	0	0.6104453990504183	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010777	Chromosome_4A	26188	21	599	35.85611730563617	0.7119590705316224	1.5987472231326705	591	0	1.4945652173913044	111	0	1.6187128412099119	480	0	0.664050709326894	52	0	unmethylated (<10%)	E7F5Q0	VWFA and cache domain-containing protein 1	cartilage morphogenesis [GO:0060536]	hit with GO BP
GN010778	Chromosome_4A	1273	4	32	37.5490966221524	0.7261707399682692	0.7303712720632989	32	0	0.6233303650934996	22	0	0.9615384615384616	10	0	0.2545454545454545	57	0	unmethylated (<10%)	Q3UZZ6	Sulfotransferase 1 family member D1 (ST1D1) (EC 2.8.2.-) (Amine N-sulfotransferase) (SULT-N) (Dopamine sulfotransferase Sult1d1) (Tyrosine-ester sulfotransferase)	sulfate assimilation [GO:0000103]; sulfation [GO:0051923]	hit with GO BP
GN010779	Chromosome_4A	2023	5	58	38.21057834898665	0.7985598780388207	0.37257824143070045	58	0	0.49964311206281226	34	0	0.2338269680436477	24	0	0	5	0	unmethylated (<10%)	P19217	Sulfotransferase 1E1 (ST1E1) (EC 2.8.2.4) (Estrogen sulfotransferase) (Sulfotransferase, estrogen-preferring)	estrogen metabolic process [GO:0008210]; sulfation [GO:0051923]	hit with GO BP
GN010780	Chromosome_4A	2310	4	83	39.523809523809526	0.9269842190763519	0.591049817056009	83	0	0.6505576208178439	76	0	0	7	0	0.6403415154749199	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010781	Chromosome_4A	1901	2	40	33.193056286165174	0.7660071725027199	1.1882426516572857	35	0	1.3888888888888888	12	0	1.1569052783803326	23	0	1.0650887573964498	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016016	Chromosome_4A	915	4	117	60.76502732240437	1.3882513129741296	0.5509641873278237	33	0	0.7490636704119851	24	0	0	9	0	1.8251681075888568	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010782	Chromosome_4A	159	1	20	59.119496855345915	1.4500683994528043	0	20	0	0	20	0	NA	NA	NA	0.24096385542168675	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019919	Chromosome_4A	279	1	18	56.630824372759854	0.8058408215661104	NA	0	NA	NA	NA	NA	NA	NA	NA	2.10016155088853	16	0.0625	NA	NA	NA	NA	no Swiss-Prot hit
GN020590	Chromosome_4A	1445	2	26	37.85467128027682	0.5029989824880844	19.38098747236551	26	0	19.73791973791974	24	0	16.176470588235293	2	0	0.9926629261976694	39	0	sparse (10-50%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN010783	Chromosome_4A	1744	2	13	32.74082568807339	0.2786832853946948	30.439330543933053	12	0	28.699551569506728	9	0	32.8732747804266	3	0	18.650793650793652	30	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010784	Chromosome_4A	1611	1	2	31.409062693978896	0.0799642617824436	0	1	0	0	1	0	NA	NA	NA	0.2544529262086514	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010861	Chromosome_5A	33306	24	807	35.00270221581697	0.7915606459629436	0.9500497842681712	678	0	1.205915813424346	114	0	0.8929930488609265	564	0	0	5	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN010862	Chromosome_5A	638	3	13	34.63949843260188	0.6824090834293237	0.2059732234809475	13	0	0.6389776357827476	5	0	0	8	0	0.5071851225697379	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010863	Chromosome_5A	6537	9	121	34.08291265106318	0.6426553569034649	9.60548885077187	61	0	13.602015113350125	18	0	8.431952662721894	43	0	1.2953367875647668	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010864	Chromosome_5A	1061	2	17	38.737040527803956	0.4289621385083714	6.238185255198488	17	0	8.88888888888889	11	0	0.591715976331361	6	0	0.6970509383378016	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010865	Chromosome_5A	20785	20	529	35.74212172239596	0.7971811859624091	0.9462824617573817	361	0	0.6055101422948834	87	0	1.0509672619047619	274	0	0.5069708491761724	41	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN010866	Chromosome_5A	8430	6	221	37.63938315539739	0.7431069266980498	3.0820646119569255	210	0	7.478005865102639	34	0	1.5912481352560914	176	0	0.8699090549624358	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010867	Chromosome_5A	15558	11	156	34.63812829412521	0.3344631634766283	75.58537227045514	153	0.8627450980392157	78.55072463768116	13	0.9230769230769231	75.28935185185185	140	0.8571428571428571	57.79601406799531	63	0.47619047619047616	methylated (>=50%)	Q1MTN8	Probable assembly chaperone of rpl4	cytosolic large ribosomal subunit assembly [GO:0180023]	hit with GO BP
GN010868	Chromosome_5A	630	1	16	39.523809523809526	0.6541207008436081	10.985915492957746	16	0.0625	10.985915492957746	16	0.0625	NA	NA	NA	47.83005938784833	47	0.5106382978723404	sparse (10-50%)	Q90673	PRELI domain-containing protein 1, mitochondrial (Px19-like protein)	phospholipid transport [GO:0015914]	hit with GO BP
GN010869	Chromosome_5A	24394	4	220	38.197917520701814	0.36627765119238437	1.4219413449195222	220	0	0.7148530579825259	35	0	1.5223274695534506	185	0	0.6369426751592356	55	0	unmethylated (<10%)	E9Q7P9	Cadherin-related family member 2	brush border assembly [GO:1904970]; cell adhesion [GO:0007155]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; homophilic cell-cell adhesion [GO:0007156]; intermicrovillar adhesion [GO:0090675]; negative regulation of cell growth involved in contact inhibition [GO:0060243]; regulation of microvillus length [GO:0032532]	hit with GO BP
GN010870	Chromosome_5A	5714	6	123	32.90164508225411	0.7967094255437813	0.8251425797840068	123	0	0.7067137809187279	22	0	0.8440005626670418	101	0	0.7036059806508356	25	0	unmethylated (<10%)	Q9VGG5	Cadherin-87A	calcium-dependent cell-cell adhesion [GO:0016339]; cell adhesion [GO:0007155]; cell-cell adhesion mediated by cadherin [GO:0044331]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN010871	Chromosome_5A	384	1	10	46.09375	0.49293966623876767	0	2	0	0	2	0	NA	NA	NA	0.6369426751592356	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010875	Chromosome_5A	1170	1	36	40.85470085470085	0.7377049180327869	1.053864168618267	30	0	1.053864168618267	30	0	NA	NA	NA	37.875178656503095	42	0.2857142857142857	unmethylated (<10%)	P30122	Bile salt-activated lipase (BAL) (EC 3.1.1.13) (EC 3.1.1.3) (EC 3.1.1.6) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Cholesterol esterase) (Pancreatic lysophospholipase) (Sterol esterase)	ceramide catabolic process [GO:0046514]; pancreatic juice secretion [GO:0030157]	hit with GO BP
GN010876	Chromosome_5A	4173	3	89	34.890965732087224	0.7023020717511176	0.39893617021276595	88	0	0.503235082674335	50	0	0.33769523005487545	38	0	0.5501481168006771	54	0	unmethylated (<10%)	Q63108	Carboxylesterase 1E (EC 3.1.1.1) (Carboxyesterase ES-3) (ES-HTEL) (Egasyn) (Liver carboxylesterase 3) (pI 5.5 esterase)	retinoid metabolic process [GO:0001523]; short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN010877	Chromosome_5A	7840	5	244	39.05612244897959	0.8171774025432562	0.8598548297040759	243	0	0.7614213197969543	116	0	0.913320696191625	127	0	0.4397834912043302	97	0	unmethylated (<10%)	G3V7J5	Pyrethroid hydrolase Ces2e (EC 3.1.1.88) (Carboxylic ester hydrolase) (EC 3.1.1.-)	retinoid metabolic process [GO:0001523]	hit with GO BP
GN010878	Chromosome_5A	2433	2	96	43.115495273325116	0.8492517125529037	1.0381905821282906	96	0	1.0555300596603947	83	0	0.9652509652509652	13	0	0.823327615780446	56	0	unmethylated (<10%)	Q04791	Fatty acyl-CoA hydrolase precursor, medium chain (EC 3.1.2.-) (Thioesterase B)	NA	hit, no GO BP
GN010879	Chromosome_5A	4898	5	86	34.646794610044914	0.585606601955785	89.86384266263238	85	0.9882352941176471	83.12020460358056	7	0.8571428571428571	90.40228711455994	78	1	0.676818950930626	49	0	methylated (>=50%)	Q9GZU0	Uncharacterized protein C6orf62 (HBV X-transactivated gene 12 protein) (HBV XAg-transactivated protein 12)	NA	hit, no GO BP
GN010880	Chromosome_5A	558	1	13	44.623655913978496	0.4686046511627907	21.352313167259787	13	0	21.352313167259787	13	0	NA	NA	NA	1.626842907981698	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010881	Chromosome_5A	1014	2	34	40.828402366863905	0.8061167227833894	1.1143695014662756	34	0	1.1750154607297465	32	0	0	2	0	2.0631578947368423	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010882	Chromosome_5A	5416	5	167	36.835302806499264	0.9094741075917546	1.4234476574759023	167	0	1.0985116938341601	63	0	1.5737704918032787	104	0	0.7265329845975007	81	0	unmethylated (<10%)	O54753	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.239) (EC 1.1.1.53) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)	androgen metabolic process [GO:0008209]; brexanolone catabolic process [GO:0062175]; estrogen biosynthetic process [GO:0006703]; retinol metabolic process [GO:0042572]	hit with GO BP
GN010883	Chromosome_5A	26030	20	253	34.25278524779101	0.3394801485825873	83.47826086956522	241	0.8962655601659751	85.55938886150813	41	0.975609756097561	83.16269337119796	200	0.88	15.288422751109318	40	0.175	methylated (>=50%)	Q6P7A9	Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)	aorta development [GO:0035904]; diaphragm contraction [GO:0002086]; glycogen catabolic process [GO:0005980]; glycogen metabolic process [GO:0005977]; glycophagy [GO:0061723]; heart morphogenesis [GO:0003007]; locomotory behavior [GO:0007626]; lysosome organization [GO:0007040]; muscle cell cellular homeostasis [GO:0046716]; neuromuscular process controlling balance [GO:0050885]; neuromuscular process controlling posture [GO:0050884]; regulation of the force of heart contraction [GO:0002026]; striated muscle contraction [GO:0006941]; tissue development [GO:0009888]	hit with GO BP
GN010910	Chromosome_5A	4363	2	81	36.80953472381389	0.5491777166894841	84.23624389207563	81	0.9753086419753086	95.1417004048583	20	1	81.33906964237698	61	0.9672131147540983	51.57639450282942	20	0.5	methylated (>=50%)	Q16982	Neurocalcin	NA	hit, no GO BP
GN010909	Chromosome_5A	10827	12	180	35.75320956867092	0.5213685503093926	84.55437769925402	179	0.9217877094972067	94.33686518085496	56	1	81.87637527505501	123	0.8861788617886179	50.25792188651437	16	0.5625	methylated (>=50%)	Q8N3C7	CAP-Gly domain-containing linker protein 4 (Restin-like protein 2)	cytoplasmic microtubule organization [GO:0031122]	hit with GO BP
GN010908	Chromosome_5A	46559	35	303	36.706114822053735	0.22049326245957218	72.75227298237738	291	0.8934707903780069	81.96519599226578	122	0.9836065573770492	68.43103306125815	169	0.8284023668639053	28.735632183908045	10	0.1	methylated (>=50%)	Q99PF4	Cadherin-23 (Otocadherin)	auditory receptor cell stereocilium organization [GO:0060088]; calcium ion transport [GO:0006816]; calcium-dependent cell-cell adhesion [GO:0016339]; cell adhesion [GO:0007155]; cell migration [GO:0016477]; cell-cell adhesion [GO:0098609]; cochlea development [GO:0090102]; equilibrioception [GO:0050957]; homophilic cell-cell adhesion [GO:0007156]; inner ear auditory receptor cell differentiation [GO:0042491]; inner ear development [GO:0048839]; inner ear morphogenesis [GO:0042472]; inner ear receptor cell stereocilium organization [GO:0060122]; locomotory behavior [GO:0007626]; neuron projection development [GO:0031175]; photoreceptor cell maintenance [GO:0045494]; regulation of cytosolic calcium ion concentration [GO:0051480]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN010907	Chromosome_5A	11770	12	237	37.306711979609176	0.5875591615956728	88.85959885386819	231	0.987012987012987	91.4112291350531	51	1	88.26563051925115	180	0.9833333333333333	89.02743142144638	14	0.9285714285714286	methylated (>=50%)	Q8C561	G protein-coupled receptor-associated protein LMBRD2 (LMBR1 domain-containing protein 2)	adrenergic receptor signaling pathway [GO:0071875]	hit with GO BP
GN010906	Chromosome_5A	29570	23	360	36.09401420358471	0.3743036395343293	79.26273580606944	358	0.9217877094972067	87.32528589580686	65	0.9846153846153847	77.91254388764762	293	0.9078498293515358	80.73229291716687	20	0.9	methylated (>=50%)	Q24746	Protein neuralized	asymmetric cell division [GO:0008356]; compound eye development [GO:0048749]; germ-line stem cell population maintenance [GO:0030718]; imaginal disc-derived wing morphogenesis [GO:0007476]; intracellular protein localization [GO:0008104]; long-term memory [GO:0007616]; mesoderm development [GO:0007498]; negative regulation of lamellocyte differentiation [GO:0035204]; nervous system development [GO:0007399]; peripheral nervous system development [GO:0007422]; positive regulation of endocytosis [GO:0045807]; positive regulation of Notch signaling pathway [GO:0045747]; protein polyubiquitination [GO:0000209]; regulation of compound eye photoreceptor development [GO:0045314]; sensory organ development [GO:0007423]; sensory organ precursor cell fate determination [GO:0016360]	hit with GO BP
GN010905	Chromosome_5A	3376	4	53	36.81872037914692	0.4639502984478637	72.14397496087636	52	0.7307692307692307	59.69331872946331	17	0.5294117647058824	79.0626902008521	35	0.8285714285714286	38.16155988857939	24	0.3333333333333333	methylated (>=50%)	Q9BT30	RNA demethylase ALKBH7, mitochondrial (EC 1.14.11.-) (Alkylated DNA repair protein alkB homolog 7) (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial) (Spermatogenesis cell proliferation-related protein) (Spermatogenesis-associated protein 11) (pre-tRNA N1-methyl adenine demethylase ALKBH7) (pre-tRNA N2-dimethyl guanosine demethylase ALKBH7)	DNA damage response [GO:0006974]; fatty acid metabolic process [GO:0006631]; oxidative RNA demethylation [GO:0035513]; regulation of lipid storage [GO:0010883]; regulation of mitochondrial membrane permeability involved in programmed necrotic cell death [GO:1902445]	hit with GO BP
GN010904	Chromosome_5A	1677	1	39	41.86046511627907	0.530971942586218	81.88153310104529	11	1	81.88153310104529	11	1	NA	NA	NA	73.48066298342542	10	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010903	Chromosome_5A	1095	2	19	39.90867579908676	0.43579807289484707	70	1	1	70	1	1	NA	NA	NA	83.26446280991736	23	1	NA	NA	NA	NA	no Swiss-Prot hit
GN010902	Chromosome_5A	3368	2	53	35.59976247030879	0.497311513409001	57.198581560283685	53	0.6981132075471698	20.992028343666963	20	0.25	81.37196924896512	33	0.9696969696969697	15.96523330283623	31	0.22580645161290322	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010901	Chromosome_5A	6977	19	94	37.09330657875878	0.39585887283936533	78.186317836309	92	0.9239130434782609	77.78436018957346	63	0.9206349206349206	78.78123629986848	29	0.9310344827586207	13.954217623079336	48	0.20833333333333334	methylated (>=50%)	Q96MR6	Cilia- and flagella-associated protein 57 (WD repeat-containing protein 65)	NA	hit, no GO BP
GN010900	Chromosome_5A	2550	3	32	32.31372549019608	0.48209854661467566	64.68354430379746	32	0.59375	68.11224489795919	12	0.6666666666666666	62.98865069356873	20	0.55	66.92385105669238	47	0.7659574468085106	methylated (>=50%)	Q0V9D9	Cytochrome c oxidase assembly factor 7 (Beta-lactamase hcp-like protein SELRC1) (Sel1 repeat-containing protein 1)	respiratory chain complex IV assembly [GO:0008535]	hit with GO BP
GN010899	Chromosome_5A	8786	3	115	34.987480081948554	0.4295201985742883	73.99035563592525	115	0.8434782608695652	78.09479981592268	44	0.7954545454545454	71.99193367689895	71	0.8732394366197183	37.163636363636364	24	0.3333333333333333	methylated (>=50%)	Q96EP9	Putative sodium/bile acid cotransporter 4 (Na(+)/bile acid cotransporter 4) (Solute carrier family 10 member 4)	bile acid and bile salt transport [GO:0015721]	hit with GO BP
GN010898	Chromosome_5A	2669	2	78	37.467216185837394	0.8328912466843501	5.259697567389875	78	0.05128205128205128	13.297872340425531	25	0.12	2.6200873362445414	53	0.018867924528301886	0.36900369003690037	12	0	unmethylated (<10%)	P42325	Neurocalcin homolog (DrosNCa)	negative regulation of neuronal signal transduction [GO:1902848]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN010897	Chromosome_5A	360	1	17	47.77777777777778	0.8534374564216985	0.8064516129032258	17	0	0.8064516129032258	17	0	NA	NA	NA	0.7667031763417306	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010896	Chromosome_5A	3102	2	53	35.88007736943907	0.5318172996053568	67.18963165075034	53	0.7547169811320755	5.357142857142857	14	0.07142857142857142	87.61343012704174	39	1	41.52490886998785	41	0.4634146341463415	methylated (>=50%)	Q0IHA2	Elongator complex protein 6 (Protein TMEM103)	positive regulation of cell migration [GO:0030335]; tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN010895	Chromosome_5A	18009	12	327	35.67660614137376	0.5710686214101313	87.01010003382787	320	0.95625	88.64447086801427	25	0.96	86.86549892167693	295	0.9559322033898305	32.55813953488372	40	0.4	methylated (>=50%)	P0CP40	Probable kinetochore protein NUF2	attachment of mitotic spindle microtubules to kinetochore [GO:0051315]; kinetochore organization [GO:0051383]; meiotic chromosome segregation [GO:0045132]	hit with GO BP
GN010894	Chromosome_5A	207	1	13	46.3768115942029	1.2013392857142857	47.60845383759733	13	0.46153846153846156	47.60845383759733	13	0.46153846153846156	NA	NA	NA	90.00502260170768	45	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010893	Chromosome_5A	12413	14	200	36.01869008297752	0.5001053553133122	85.47966837741808	199	0.9547738693467337	87.79472954230236	35	1	85.0028565987431	164	0.9451219512195121	65.07936507936508	11	0.8181818181818182	methylated (>=50%)	Q9UIF7	Adenine DNA glycosylase (EC 3.2.2.31) (MutY homolog) (hMYH)	base-excision repair [GO:0006284]; depurination [GO:0045007]; DNA repair [GO:0006281]; mismatch repair [GO:0006298]; negative regulation of necroptotic process [GO:0060546]	hit with GO BP
GN010892	Chromosome_5A	7420	11	86	36.913746630727765	0.3405940594059406	88.96416083916084	86	0.9883720930232558	89.59537572254335	16	1	88.85169927909372	70	0.9857142857142858	13.499543934326542	44	0.25	methylated (>=50%)	F1MF21	PCNA-interacting partner (PARI) (PARP-1 binding protein) (PARP1-binding protein) (PARPBP)	negative regulation of double-strand break repair via homologous recombination [GO:2000042]	hit with GO BP
GN010891	Chromosome_5A	10673	13	155	35.39773259627096	0.46588650698682615	83.08632198212467	154	0.9675324675324676	84.41345365053323	46	0.9347826086956522	82.58084674269645	108	0.9814814814814815	15.542271562766866	15	0.06666666666666667	methylated (>=50%)	Q32NG5	Solute carrier family 2, facilitated glucose transporter member 12 (Glucose transporter type 12) (GLUT-12)	circulatory system development [GO:0072359]; D-glucose transmembrane transport [GO:1904659]	hit with GO BP
GN010921	Chromosome_5A	1905	1	79	46.40419947506562	0.7704732552424639	58.81778212017587	64	0.671875	58.81778212017587	64	0.671875	NA	NA	NA	3.341808935706502	42	0	methylated (>=50%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN010920	Chromosome_5A	1905	1	78	46.40419947506562	0.7615782028415031	0.4132231404958678	58	0	0.4132231404958678	58	0	NA	NA	NA	0.6129032258064516	41	0	unmethylated (<10%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN010919	Chromosome_5A	1905	1	83	46.876640419947506	0.7937260925875727	0.3898635477582846	64	0	0.3898635477582846	64	0	NA	NA	NA	1.257029440952696	59	0	unmethylated (<10%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN010918	Chromosome_5A	14474	5	109	34.02653033024734	0.26415946688098585	62.559947081197286	105	0.6952380952380952	86.08768971332209	22	0.9545454545454546	56.819584447644516	83	0.6265060240963856	53.447354355959384	24	0.4583333333333333	methylated (>=50%)	Q7TT16	Inositol polyphosphate multikinase (EC 2.7.1.140) (EC 2.7.1.151) (EC 2.7.1.153) (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)	inositol phosphate biosynthetic process [GO:0032958]; inositol trisphosphate metabolic process [GO:0032957]; necroptotic process [GO:0070266]; neural tube formation [GO:0001841]; phosphatidylinositol metabolic process [GO:0046488]	hit with GO BP
GN010917	Chromosome_5A	7820	6	106	35.65217391304348	0.426682973809226	84.12526997840173	105	0.9619047619047619	92.65734265734265	10	1	83.2994923857868	95	0.9578947368421052	90.6860517946388	33	1	methylated (>=50%)	Q9FPH3	Probable low-specificity L-threonine aldolase 2 (EC 4.1.2.48) (Threonine aldolase 2)	glycine biosynthetic process [GO:0006545]; L-threonine catabolic process [GO:0006567]	hit with GO BP
GN010916	Chromosome_5A	15696	18	229	34.798674821610604	0.48471150744547375	84.11376806767468	228	0.9342105263157895	92.36988377968672	40	0.975	82.86021175387448	188	0.925531914893617	87.20518867924528	33	1	methylated (>=50%)	Q6Q0C0	E3 ubiquitin-protein ligase TRAF7 (EC 2.3.2.-) (EC 2.3.2.27) (RING finger and WD repeat-containing protein 1) (RING finger protein 119) (RING-type E3 ubiquitin transferase TRAF7) (TNF receptor-associated factor 7)	apoptotic process [GO:0006915]; positive regulation of apoptotic signaling pathway [GO:2001235]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; protein K29-linked ubiquitination [GO:0035519]; protein ubiquitination [GO:0016567]; regulation of ERK1 and ERK2 cascade [GO:0070372]	hit with GO BP
GN010915	Chromosome_5A	1495	1	18	58.99665551839465	0.49281201355187254	0.8250825082508251	18	0	0.8250825082508251	18	0	NA	NA	NA	0.45090180360721444	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010914	Chromosome_5A	1422	3	33	40.85794655414909	0.5569322794274728	0.6578947368421053	23	0	0.6578947368421053	23	0	NA	NA	NA	0.547536087605774	110	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010913	Chromosome_5A	754	2	15	51.9893899204244	0.2946002969445964	0	5	0	0	4	0	0	1	0	0.5594033031433138	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010912	Chromosome_5A	38662	30	520	37.3493352646009	0.3903410006543143	86.16384062937688	512	0.96875	90.61232017705643	104	0.9903846153846154	85.30655766838457	408	0.9632352941176471	90.08138351983723	76	1	methylated (>=50%)	E9PY46	Intraflagellar transport protein 140 homolog (WD and tetratricopeptide repeats protein 2)	cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; embryonic brain development [GO:1990403]; embryonic camera-type eye development [GO:0031076]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic digit morphogenesis [GO:0042733]; heart development [GO:0007507]; intraciliary anterograde transport [GO:0035720]; intraciliary retrograde transport [GO:0035721]; intraciliary transport [GO:0042073]; limb morphogenesis [GO:0035108]; neural tube patterning [GO:0021532]; non-motile cilium assembly [GO:1905515]; photoreceptor cell outer segment organization [GO:0035845]; protein localization to cilium [GO:0061512]; protein localization to non-motile cilium [GO:0097499]; regulation of cilium assembly [GO:1902017]; regulation of smoothened signaling pathway [GO:0008589]	hit with GO BP
GN011559	Chromosome_5A	415	1	13	41.204819277108435	0.7400548696844993	1.0706638115631693	13	0	1.0706638115631693	13	0	NA	NA	NA	3.507825148407987	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010852	Chromosome_5A	920	2	17	37.06521739130435	0.5409144359133984	16.666666666666668	2	0	16.666666666666668	2	0	NA	NA	NA	2.08	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010853	Chromosome_5A	1110	1	32	49.729729729729726	0.47390962095235556	0.7633587786259542	18	0	0.7633587786259542	18	0	NA	NA	NA	0	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010854	Chromosome_5A	729	1	22	41.56378600823045	0.7282717282717283	0.2557544757033248	21	0	0.2557544757033248	21	0	NA	NA	NA	1.932367149758454	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010855	Chromosome_5A	7688	10	201	34.95057232049948	0.8562812733771091	0.4294249439880508	198	0	0.411522633744856	44	0	0.4361210877373012	154	0	0.8382642998027613	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010856	Chromosome_5A	879	1	9	39.93174061433447	0.2576033865190492	1.075268817204301	6	0	1.075268817204301	6	0	NA	NA	NA	1.9047619047619047	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010857	Chromosome_5A	324	1	11	48.148148148148145	0.5892857142857143	0	2	0	0	2	0	NA	NA	NA	0.45454545454545453	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010858	Chromosome_5A	8895	9	219	35.16582349634626	0.79674961348744755	0.6478102189781022	219	0	0.885558583106267	31	0	0.6110408765276022	188	0	0.8761682242990654	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010804	Chromosome_5A	1923	7	40	32.50130005200208	0.8062893081761007	0.8902077151335311	40	0	0.7756948933419522	22	0	1.009421265141319	18	0	0.3740648379052369	43	0	unmethylated (<10%)	Q99M80	Receptor-type tyrosine-protein phosphatase T (R-PTP-T) (EC 3.1.3.48) (RPTPmam4) (Receptor-type tyrosine-protein phosphatase rho) (RPTP-rho) (mRPTPrho)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to interleukin-6 [GO:0071354]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell migration [GO:0030336]; negative regulation of receptor signaling pathway via STAT [GO:1904893]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; regulation of synapse organization [GO:0050807]; signal transduction [GO:0007165]	hit with GO BP
GN010859	Chromosome_5A	531	1	17	42.56120527306968	0.717967072297781	35.18987341772152	17	0.4117647058823529	35.18987341772152	17	0.4117647058823529	NA	NA	NA	1.0434782608695652	44	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010860	Chromosome_5A	78946	26	1881	34.74906898386239	0.7893158082413462	1.1736630871027227	1655	0	0.7270323859881032	112	0	1.205043070421881	1543	0	1.1011011011011012	35	0	unmethylated (<10%)	P23469	Receptor-type tyrosine-protein phosphatase epsilon (Protein-tyrosine phosphatase epsilon) (R-PTP-epsilon) (EC 3.1.3.48)	negative regulation of insulin receptor signaling pathway [GO:0046627]; protein dephosphorylation [GO:0006470]; regulation of mast cell activation [GO:0033003]; signal transduction [GO:0007165]	hit with GO BP
GN010851	Chromosome_5A	690	1	13	47.68115942028985	0.37069179271014135	2.6315789473684212	3	0	2.6315789473684212	3	0	NA	NA	NA	63.793103448275865	19	0.7894736842105263	NA	NA	NA	NA	no Swiss-Prot hit
GN010850	Chromosome_5A	5281	5	49	33.98977466388941	0.3219721289038198	43.39622641509434	30	0.5	50.431778929188255	25	0.6	6.363636363636363	5	0	3.9735099337748343	8	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010849	Chromosome_5A	1686	6	42	35.05338078291815	0.8384285680456558	0.36258158085569253	41	0	0.12300123001230012	25	0	0.7067137809187279	16	0	0.41841004184100417	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010848	Chromosome_5A	4510	6	118	35.1219512195122	0.8504769529982756	0.7236388697450035	117	0	0.764525993883792	24	0	0.7117437722419929	93	0	0.6071118820468343	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010803	Chromosome_5A	1042	3	23	33.10940499040307	0.8296752752198296	0.4214963119072708	23	0	0.26737967914438504	6	0	0.5217391304347826	17	0	0.9771986970684039	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010847	Chromosome_5A	18804	12	489	35.34886194426718	0.8329212730190805	2.290363896632261	473	0	0.35874439461883406	47	0	2.4675111037999673	426	0	0.9034443817052513	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010846	Chromosome_5A	978	1	24	49.488752556237216	0.40704772475027745	0	6	0	0	6	0	NA	NA	NA	0.3412969283276451	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020682	Chromosome_5A	348	2	6	44.827586206896555	0.3431952662721893	0	3	0	0	2	0	0	1	0	5.303760848601736	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010845	Chromosome_5A	399	1	13	42.857142857142854	0.7623456790123457	0.4219409282700422	13	0	0.4219409282700422	13	0	NA	NA	NA	3.491271820448878	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010844	Chromosome_5A	240	1	4	44.166666666666664	0.3461954561846376	1.1904761904761905	4	0	1.1904761904761905	4	0	NA	NA	NA	8.42344906089926	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010843	Chromosome_5A	4078	4	105	34.13437959784208	0.8847357818069115	1.0174418604651163	104	0	0.7978723404255319	15	0	1.0521885521885521	89	0	0.6779661016949152	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010842	Chromosome_5A	402	1	14	45.27363184079602	0.7073017468895312	0.8658008658008658	11	0	0.8658008658008658	11	0	NA	NA	NA	0.4672897196261682	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010806	Chromosome_5A	335	1	14	40.298507462686565	1.1035294117647059	0.4592016955139527	14	0	0.4592016955139527	14	0	NA	NA	NA	0.5448717948717948	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010805	Chromosome_5A	8487	10	165	33.74572876163544	0.6828974626062124	0.5616359447004609	165	0	0.6719609040928528	46	0	0.5276050499340493	119	0	0.5862646566164154	33	0	unmethylated (<10%)	P23469	Receptor-type tyrosine-protein phosphatase epsilon (Protein-tyrosine phosphatase epsilon) (R-PTP-epsilon) (EC 3.1.3.48)	negative regulation of insulin receptor signaling pathway [GO:0046627]; protein dephosphorylation [GO:0006470]; regulation of mast cell activation [GO:0033003]; signal transduction [GO:0007165]	hit with GO BP
GN002005	Chromosome_5A	504	1	13	43.05555555555556	0.60431654676259	0.25773195876288657	13	0	0.25773195876288657	13	0	NA	NA	NA	0.8426966292134831	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010841	Chromosome_5A	4658	5	105	34.7788750536711	0.7469257976432643	0.4732435384055333	97	0	0.2145922746781116	21	0	0.526085050416484	76	0	0.5576208178438662	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010840	Chromosome_5A	346	2	9	37.861271676300575	0.7382645803698435	0.8888888888888888	9	0	0.6211180124223602	7	0	1.5625	2	0	0.6045949214026602	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010839	Chromosome_5A	1354	4	29	35.37666174298375	0.6999286987522282	0.4608294930875576	29	0	0.43478260869565216	18	0	0.49019607843137253	11	0	9.993792675356922	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010838	Chromosome_5A	910	3	20	37.032967032967036	0.6410707995773159	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010835	Chromosome_5A	910	4	20	36.92307692307692	0.6448641179180101	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010836	Chromosome_5A	657	2	13	37.89954337899543	0.553030303030303	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010837	Chromosome_5A	910	4	20	36.92307692307692	0.6448641179180101	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010834	Chromosome_5A	1580	6	33	35.56962025316456	0.6846832650488497	0.5165289256198347	31	0	0.5714285714285714	18	0	0.45146726862302483	13	0	0.30464584920030463	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010833	Chromosome_5A	1866	6	41	34.61950696677385	0.754400323429935	0.8385744234800838	41	0	0.7566204287515763	22	0	0.9404388714733543	19	0	0.35860655737704916	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010832	Chromosome_5A	1061	3	51	44.29783223374175	0.9862751531058618	2.8937577511368335	51	0	1.3579576317218902	38	0	7.7854671280276815	13	0	0.5279831045406547	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010831	Chromosome_5A	675	1	14	41.333333333333336	0.4889279801324503	0.4596191726854892	14	0	0.4596191726854892	14	0	NA	NA	NA	4.087645000920641	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010830	Chromosome_5A	2884	4	47	34.25797503467406	0.5558275617447215	0.4548807474797148	38	0	0.22624434389140272	11	0	0.5401755570560433	27	0	0.9448818897637795	26	0	unmethylated (<10%)	Q1RMM0	THAP domain-containing protein 5	negative regulation of cell cycle [GO:0045786]	hit with GO BP
GN010829	Chromosome_5A	1819	3	33	37.38317757009346	0.5233391455972101	0.6923076923076923	33	0	0.8960573476702509	14	0	0.5390835579514824	19	0	1.1754068716094033	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010828	Chromosome_5A	2538	3	100	40.66193853427896	0.9560330279652844	0.510899182561308	97	0	0.7954545454545454	27	0	0.38910505836575876	70	0	0.540091400083091	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010815	Chromosome_5A	309	1	19	46.92556634304207	1.126006904487917	0.4492939666238768	19	0	0.4492939666238768	19	0	NA	NA	NA	0.34343736001194564	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010816	Chromosome_5A	1660	4	20	37.04819277108434	0.4076320506838887	84.42244224422443	20	0.95	77.00787401574803	9	0.8888888888888888	89.77272727272727	11	1	0.5240590757503573	53	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010817	Chromosome_5A	657	1	22	49.61948249619483	0.544755587381751	30	1	0	30	1	0	NA	NA	NA	42.38805970149254	7	0.14285714285714285	NA	NA	NA	NA	no Swiss-Prot hit
GN010818	Chromosome_5A	2092	5	57	36.32887189292543	0.8313220253905842	1.3581129378127235	57	0	1.583710407239819	17	0	1.2539184952978057	40	0	0.3908431044109436	38	0	unmethylated (<10%)	O75293	Growth arrest and DNA damage-inducible protein GADD45 beta (Myeloid differentiation primary response protein MyD118) (Negative growth regulatory protein MyD118)	positive regulation of apoptotic process [GO:0043065]; positive regulation of JNK cascade [GO:0046330]; positive regulation of p38MAPK cascade [GO:1900745]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN010819	Chromosome_5A	23980	24	680	36.492910758965806	0.8529815225697162	0.6508188706917624	672	0	0.5072708826513358	128	0	0.6824793018572387	544	0	0.8957362952346829	34	0	unmethylated (<10%)	A3KPQ7	Cell surface hyaluronidase (EC 3.2.1.35) (Cell migration-inducing hyaluronidase 2) (Protein frozen ventricle) (Protein wickham) (Transmembrane protein 2)	atrioventricular valve formation [GO:0003190]; cardiac muscle tissue morphogenesis [GO:0055008]; cell migration involved in heart formation [GO:0060974]; cell migration to the midline involved in heart development [GO:0003318]; embryonic heart tube morphogenesis [GO:0003143]; endocardial cushion development [GO:0003197]; heart looping [GO:0001947]; hyaluronan catabolic process [GO:0030214]; muscle attachment [GO:0016203]; muscle tissue morphogenesis [GO:0060415]; positive regulation of extracellular matrix assembly [GO:1901203]; positive regulation of vascular endothelial growth factor signaling pathway [GO:1900748]; regulation of sprouting angiogenesis [GO:1903670]; regulation of Wnt signaling pathway [GO:0030111]	hit with GO BP
GN010820	Chromosome_5A	1661	2	54	48.464780252859725	0.5542688352778327	1.1795543905635648	42	0	1.1795543905635648	42	0	NA	NA	NA	0.8938547486033519	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010821	Chromosome_5A	270	1	13	43.333333333333336	1.0347877358490567	0.5602240896358543	13	0	0.5602240896358543	13	0	NA	NA	NA	1.549053356282272	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010822	Chromosome_5A	36646	5	848	30.47263002783387	0.9970369122183079	1.1163206072784104	629	0	0.24539877300613497	17	0	1.1395638221232562	612	0	0.4986287708800798	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010798	Chromosome_5A	31313	13	410	34.41701529716092	0.4430579252805018	83.41515739098148	401	0.8902743142144638	86.0248447204969	31	0.9032258064516129	83.22948429007026	370	0.8891891891891892	14.074914869466514	34	0.11764705882352941	methylated (>=50%)	Q6DCY9	HAUS augmin-like complex subunit 3	centrosome cycle [GO:0007098]; microtubule organizing center organization [GO:0031023]; regulation of microtubule nucleation [GO:0010968]; spindle assembly [GO:0051225]	hit with GO BP
GN017871	Chromosome_5A	2554	3	73	37.74471417384495	0.8432931683311623	0	1	0	NA	NA	NA	0	1	0	1.649746192893401	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010807	Chromosome_5A	1015	3	26	35.86206896551724	0.8037155474341404	0.48845470692717585	26	0	0.22988505747126436	6	0	0.550357732526142	20	0	0.36818851251840945	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010810	Chromosome_5A	13293	14	189	35.620251260061686	0.4484716942938755	80.11505273250239	171	0.8830409356725146	89.24471299093656	37	0.9459459459459459	78.3931623931624	134	0.8656716417910447	68.00995024875621	60	0.75	methylated (>=50%)	Q9DB77	Cytochrome b-c1 complex subunit 2, mitochondrial (Complex III subunit 2) (Core protein II) (Ubiquinol-cytochrome-c reductase complex core protein 2)	cellular respiration [GO:0045333]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]; proteolysis [GO:0006508]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN010809	Chromosome_5A	9916	4	233	33.94513916901977	0.8176292083736616	0.7484041382346467	224	0	0.8879781420765027	60	0	0.7215953817895565	164	0	52.39663373582144	51	0.47058823529411764	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010808	Chromosome_5A	1119	1	55	43.96782841823056	1.0174240796151495	0.910643141718839	55	0	0.910643141718839	55	0	NA	NA	NA	1.9618834080717489	47	0	unmethylated (<10%)	P9WEL6	Ava biosynthesis cluster protein O	NA	hit, no GO BP
GN010814	Chromosome_5A	335	1	4	61.492537313432834	0.3183654074602043	NA	0	NA	NA	NA	NA	NA	NA	NA	84.122359796067	28	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN010812	Chromosome_5A	9822	6	101	35.58338423946243	0.3283955913869573	93.0822596630327	98	0.9897959183673469	95.64553093964858	27	1	92.18415417558886	71	0.9859154929577465	89.03531892461781	33	1	methylated (>=50%)	Q5VYX0	Renalase (EC 1.6.3.5) (Monoamine oxidase-C) (MAO-C)	negative regulation of blood pressure [GO:0045776]; negative regulation of heart rate [GO:0010459]; response to catecholamine [GO:0071869]; response to epinephrine [GO:0071871]; response to ischemia [GO:0002931]; response to salt [GO:1902074]	hit with GO BP
GN010924	Chromosome_5A	533	1	18	39.77485928705441	0.8960493135332026	43.609022556390975	14	0.42857142857142855	43.609022556390975	14	0.42857142857142855	NA	NA	NA	15.436241610738255	40	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010923	Chromosome_5A	402	1	21	52.7363184079602	0.7610890732059141	82.12290502793296	21	0.8571428571428571	82.12290502793296	21	0.8571428571428571	NA	NA	NA	82.29587712206953	35	0.9142857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010937	Chromosome_5A	17328	5	219	37.89819944598338	0.3551151952986094	59.55631399317406	162	0.6851851851851852	61.36493106984163	146	0.7328767123287672	33.0550918196995	16	0.25	70.69536423841059	10	0.8	methylated (>=50%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN010925	Chromosome_5A	30643	11	514	36.48141500505825	0.5044977988581737	1.1391068195534098	341	0	1.529140219272937	111	0	1.0010214504596526	230	0	0.4892966360856269	35	0	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN010926	Chromosome_5A	14192	3	222	38.28213077790304	0.43064137821686904	4.702351175587794	80	0.05	4.918032786885246	75	0.05333333333333334	0.9259259259259259	5	0	NA	NA	NA	unmethylated (<10%)	Q9NZJ4	Sacsin (DnaJ homolog subfamily C member 29)	negative regulation of inclusion body assembly [GO:0090084]; protein folding [GO:0006457]	hit with GO BP
GN010927	Chromosome_5A	2664	1	52	43.31831831831832	0.417001806140879	91.04031856645096	52	0.9615384615384616	91.04031856645096	52	0.9615384615384616	NA	NA	NA	88.6762360446571	25	0.92	methylated (>=50%)	Q14CX7	N-alpha-acetyltransferase 25, NatB auxiliary subunit (Mitochondrial distribution and morphology protein 20) (N-terminal acetyltransferase B complex subunit MDM20) (NatB complex subunit MDM20) (N-terminal acetyltransferase B complex subunit NAA25) (p120)	cytoskeleton organization [GO:0007010]	hit with GO BP
GN010928	Chromosome_5A	258	1	8	45.348837209302324	0.6035087719298246	0.35587188612099646	8	0	0.35587188612099646	8	0	NA	NA	NA	37.67313019390582	34	0.47058823529411764	unmethylated (<10%)	Q6QI44	N-alpha-acetyltransferase 25, NatB auxiliary subunit (Liver regeneration-related protein LRRGT00164) (Mitochondrial distribution and morphology protein 20) (N-terminal acetyltransferase B complex subunit MDM20) (NatB complex subunit MDM20) (N-terminal acetyltransferase B complex subunit NAA25)	cytoskeleton organization [GO:0007010]	hit with GO BP
GN010929	Chromosome_5A	411	1	9	45.742092457420924	0.4562723572221537	86.73913043478261	9	0.8888888888888888	86.73913043478261	9	0.8888888888888888	NA	NA	NA	90.61317183951552	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010930	Chromosome_5A	2755	5	86	38.439201451905625	0.8452307055659011	2.006172839506173	58	0	1.466275659824047	33	0	2.6058631921824102	25	0	0.9643201542912246	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010931	Chromosome_5A	315	1	22	62.857142857142854	0.8912037037037037	1.9723865877712032	13	0	1.9723865877712032	13	0	NA	NA	NA	2.10016155088853	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010933	Chromosome_5A	36946	24	536	35.74405889676826	0.4549860649854646	88.00226773439161	507	0.960552268244576	90.11330815374362	84	0.9523809523809523	87.60170313224569	423	0.9621749408983451	61.966884094330155	27	0.5925925925925926	methylated (>=50%)	P82094	TATA element modulatory factor (TMF) (Androgen receptor coactivator 160 kDa protein) (Androgen receptor-associated protein of 160 kDa)	androgen receptor signaling pathway [GO:0030521]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of proteasomal protein catabolic process [GO:0061136]	hit with GO BP
GN010932	Chromosome_5A	27519	9	328	36.25858497765181	0.3660742791288029	59.27264249912577	317	0.5993690851735016	80.7751937984496	40	0.825	56.53944688957498	277	0.5667870036101083	83.12829525483303	14	0.9285714285714286	methylated (>=50%)	Q8WXE0	Caskin-2 (CASK-interacting protein 2)	signal transduction [GO:0007165]	hit with GO BP
GN010938	Chromosome_5A	1300	3	14	36.61538461538461	0.32488976954247667	92.35668789808918	14	1	94.24460431654676	9	1	90.21739130434783	5	1	22.427797833935017	44	0.29545454545454547	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010941	Chromosome_5A	285	1	9	43.50877192982456	0.6700626959247649	3.6199095022624435	9	0	3.6199095022624435	9	0	NA	NA	NA	4.176755447941889	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010940	Chromosome_5A	613	1	21	42.08809135399674	0.7946296296296296	8.071135430916552	20	0	8.071135430916552	20	0	NA	NA	NA	12.567567567567568	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010939	Chromosome_5A	779	1	31	44.801026957637994	0.8041625041625041	0.7434944237918215	31	0	0.7434944237918215	31	0	NA	NA	NA	0.6442376521116678	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011529	Chromosome_5A	729	1	29	41.56378600823045	0.9218995290423861	NA	0	NA	NA	NA	NA	NA	NA	NA	3.474212034383954	69	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010959	Chromosome_5A	396	1	6	42.42424242424242	0.3375	91.86602870813397	6	1	91.86602870813397	6	1	NA	NA	NA	64.53055141579732	28	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010958	Chromosome_5A	636	1	12	43.710691823899374	0.39552238805970147	77.36842105263158	12	0.8333333333333334	77.36842105263158	12	0.8333333333333334	NA	NA	NA	91.84163167366526	31	0.9354838709677419	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010957	Chromosome_5A	13555	4	171	35.76540022132055	0.39623289808037976	46.01863617111393	171	0.5321637426900585	68.26099793327428	76	0.75	33.58098068350669	95	0.35789473684210527	55.09838998211091	19	0.47368421052631576	sparse (10-50%)	Q6ZVD7	Storkhead-box protein 1 (Winged-helix domain-containing protein)	cellular response to nitrosative stress [GO:0071500]; inner ear development [GO:0048839]; negative regulation of gene expression [GO:0010629]; positive regulation of cyclin-dependent protein kinase activity [GO:1904031]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; positive regulation of gene expression [GO:0010628]; positive regulation of otic vesicle morphogenesis [GO:1904120]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; positive regulation of peptidyl-threonine phosphorylation [GO:0010800]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; regulation of gene expression [GO:0010468]; regulation of mitochondrial DNA metabolic process [GO:1901858]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of mitochondrion organization [GO:0010821]; regulation of response to oxidative stress [GO:1902882]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN010956	Chromosome_5A	17586	12	257	36.472193790515185	0.43948117595682357	84.68752186996991	248	0.9758064516129032	89.83833718244804	33	1	83.97706458549017	215	0.9720930232558139	78.85047148630444	24	0.875	methylated (>=50%)	P82861	NADPH:adrenodoxin oxidoreductase, mitochondrial (AR) (Adrenodoxin reductase) (EC 1.18.1.6) (Ferredoxin--NADP(+) reductase) (Ferredoxin reductase)	cholesterol metabolic process [GO:0008203]	hit with GO BP
GN010955	Chromosome_5A	6407	4	90	35.28952707975652	0.4598875463572198	85.55718475073314	89	0.9887640449438202	89.28220255653883	19	1	84.70376210858302	70	0.9857142857142858	83.15445636957536	33	0.9696969696969697	methylated (>=50%)	Q99PT1	Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (GDI-1) (Rho-GDI alpha)	cellular response to mechanical stimulus [GO:0071260]; negative regulation of cell migration [GO:0030336]; regulation of cell shape [GO:0008360]; regulation of protein localization [GO:0032880]; regulation of Rho protein signal transduction [GO:0035023]; regulation of synaptic vesicle cycle [GO:0098693]; Rho protein signal transduction [GO:0007266]; semaphorin-plexin signaling pathway [GO:0071526]	hit with GO BP
GN010954	Chromosome_5A	26443	11	359	35.46118065272473	0.43197241393871666	77.1197914055057	353	0.8385269121813032	65.04709965294992	40	0.65	78.47818810666071	313	0.8626198083067093	58.383233532934135	27	0.6296296296296297	methylated (>=50%)	Q3T106	Serine/arginine-rich splicing factor 7 (Splicing factor, arginine/serine-rich 7)	negative regulation of mRNA splicing, via spliceosome [GO:0048025]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN010953	Chromosome_5A	3167	2	4	40.101041995579415	0.03142449612403101	0	4	0	0	4	0	NA	NA	NA	80.0203873598369	15	0.8666666666666667	NA	NA	NA	NA	no Swiss-Prot hit
GN010952	Chromosome_5A	901	3	24	39.067702552719204	0.7113157894736842	32.247377139701825	24	0	33.631484794275494	20	0	14.925373134328359	4	0	9.75609756097561	28	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010951	Chromosome_5A	17314	20	215	34.71179392399215	0.4146874607315145	86.67773846487111	215	0.9162790697674419	83.07579102281089	55	0.8363636363636363	87.55727248225676	160	0.94375	28.524590163934427	9	0.3333333333333333	methylated (>=50%)	Q9UH99	SUN domain-containing protein 2 (Protein unc-84 homolog B) (Rab5-interacting protein) (Rab5IP) (Sad1/unc-84 protein-like 2)	centrosome localization [GO:0051642]; mitotic spindle organization [GO:0007052]; nuclear matrix anchoring at nuclear membrane [GO:0090292]; nuclear migration [GO:0007097]; nuclear migration along microfilament [GO:0031022]; nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration [GO:0021817]; positive regulation of cell migration [GO:0030335]	hit with GO BP
GN017158	Chromosome_5A	873	1	8	40.32073310423826	0.22553040333257984	4.114490161001789	8	0	4.114490161001789	8	0	NA	NA	NA	1.6975917883932097	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010947	Chromosome_5A	393	1	17	45.29262086513995	0.8461246200607903	0.3418803418803419	17	0	0.3418803418803419	17	0	NA	NA	NA	1.225865767698437	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010946	Chromosome_5A	1443	1	55	44.21344421344421	0.7883522727272727	1.1075949367088607	47	0	1.1075949367088607	47	0	NA	NA	NA	1.5866020273248127	58	0	unmethylated (<10%)	Q10984	Galactoside alpha-(1,2)-fucosyltransferase 2 (Alpha 1,2-fucosyltransferase) (Alpha 1,2-fucosyltransferase B) (Alpha 1-2 fucosyltransferase) (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (Secretor blood group alpha-2-fucosyltransferase) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.344)	glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN010945	Chromosome_5A	2479	7	68	38.28156514723679	0.7510514684915882	0.4881450488145049	68	0	0.5012531328320802	40	0	0.4716981132075472	28	0	0.635039223010833	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010962	Chromosome_5A	32402	18	682	34.56885377445837	0.705300470196824	0.6736697876227449	666	0	0.8227550540667607	80	0	0.6530638767951134	586	0	0.3559693318729463	42	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN010963	Chromosome_5A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN010964	Chromosome_5A	19213	14	466	36.95414563056264	0.7104378346720015	2.772847205564884	466	0	1.7157656199417288	64	0	2.9567470150934896	402	0	0.3156787092248334	65	0	unmethylated (<10%)	O14522	Receptor-type tyrosine-protein phosphatase T (R-PTP-T) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase rho) (RPTP-rho)	cell adhesion [GO:0007155]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to interleukin-6 [GO:0071354]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell migration [GO:0030336]; negative regulation of receptor signaling pathway via STAT [GO:1904893]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]	hit with GO BP
GN010965	Chromosome_5A	324	1	16	54.32098765432099	0.6702003878474466	NA	0	NA	NA	NA	NA	NA	NA	NA	13.82390472139515	43	0.2558139534883721	NA	NA	NA	NA	no Swiss-Prot hit
GN010966	Chromosome_5A	486	1	13	41.1522633744856	0.6358695652173914	2.159827213822894	13	0	2.159827213822894	13	0	NA	NA	NA	19.730941704035875	32	0.21875	unmethylated (<10%)	Q5ZLV2	Peptidyl-prolyl cis-trans isomerase-like 3 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL3) (Rotamase PPIL3)	protein folding [GO:0006457]	hit with GO BP
GN010967	Chromosome_5A	22963	28	270	35.718329486565345	0.36975195349482126	85.44856202604092	240	0.95	90.5022376926902	85	1	83.4069907593411	155	0.9225806451612903	81.25755743651753	12	0.9166666666666666	methylated (>=50%)	P35574	Glycogen debranching enzyme (Glycogen debrancher) [Includes: 4-alpha-glucanotransferase (EC 2.4.1.25) (Oligo-1,4-1,4-glucantransferase); Amylo-alpha-1,6-glucosidase (Amylo-1,6-glucosidase) (EC 3.2.1.33) (Dextrin 6-alpha-D-glucosidase)]	glycogen biosynthetic process [GO:0005978]; glycogen catabolic process [GO:0005980]	hit with GO BP
GN010968	Chromosome_5A	2247	4	11	36.89363595905652	0.1515748031496063	81.85117967332124	11	0.8181818181818182	29.6875	2	0.5	88.70636550308008	9	0.8888888888888888	48.9065606361829	11	0.2727272727272727	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010971	Chromosome_5A	18093	5	528	36.52793898192671	0.8749867878708166	0.6543450809321547	528	0	0.3563791874554526	40	0	0.6712494945410432	488	0	1.4722536806342015	38	0	unmethylated (<10%)	Q8WPA2	Allatostatin-A receptor (BAR)	NA	hit, no GO BP
GN010972	Chromosome_5A	10884	10	141	33.948915839764794	0.45265675290475427	87.63052208835342	138	0.9492753623188406	75.47368421052632	18	0.8333333333333334	89.40184049079754	120	0.9666666666666667	0.7331378299120235	35	0	methylated (>=50%)	O43808	Peroxisomal membrane protein PMP34 (34 kDa peroxisomal membrane protein) (Solute carrier family 25 member 17)	ATP transport [GO:0015867]; fatty acid alpha-oxidation [GO:0001561]; fatty acid beta-oxidation [GO:0006635]; fatty acid transport [GO:0015908]; nucleotide transmembrane transport [GO:1901679]	hit with GO BP
GN010973	Chromosome_5A	8923	9	151	34.618401882774855	0.5691385872205256	92.89692469125838	151	1	94.1116231438812	36	1	92.66960521272519	115	1	27.39322533136966	37	0.21621621621621623	methylated (>=50%)	P53395	Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial (EC 2.3.1.168) (Branched-chain alpha-keto acid dehydrogenase complex component E2) (BCKAD-E2) (BCKADE2) (Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex) (Dihydrolipoamide branched chain transacylase) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase)	branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA [GO:0120552]; branched-chain amino acid catabolic process [GO:0009083]; L-isoleucine catabolic process [GO:0006550]; L-leucine catabolic process [GO:0006552]; L-valine catabolic process [GO:0006574]	hit with GO BP
GN010974	Chromosome_5A	624	1	8	48.55769230769231	0.21768707482993196	1.0416666666666667	6	0	1.0416666666666667	6	0	NA	NA	NA	0.8514664143803217	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010975	Chromosome_5A	4308	1	60	45.496750232126274	0.28600639995751065	79.79120059656972	54	0.9259259259259259	79.79120059656972	54	0.9259259259259259	NA	NA	NA	70.47952047952047	37	0.9459459459459459	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010976	Chromosome_5A	5507	4	79	36.75322317051026	0.4250357572725994	80.05761134500332	79	0.8354430379746836	61.87845303867403	24	0.5	83.53127474267617	55	0.9818181818181818	41.81478016838167	45	0.5777777777777777	methylated (>=50%)	Q2YDC9	uS5 assembly chaperone PDCD2 (Programmed cell death protein 2)	ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN010977	Chromosome_5A	7653	6	127	39.291781000914675	0.4303546427138709	81.87078109932497	101	0.801980198019802	63.38709677419355	19	0.47368421052631576	85.11904761904762	82	0.8780487804878049	3.1088082901554404	15	0	methylated (>=50%)	Q29L80	PITH domain-containing protein GA19395	positive regulation of megakaryocyte differentiation [GO:0045654]	hit with GO BP
GN010978	Chromosome_5A	10766	12	113	36.16013375441204	0.3259403459813056	92.5562372188139	105	1	92.97205757832346	40	1	92.35873718077619	65	1	91.42713061018658	26	1	methylated (>=50%)	Q5EA80	Geranylgeranyl transferase type-2 subunit alpha (EC 2.5.1.60) (Geranylgeranyl transferase type II subunit alpha) (Rab geranyl-geranyltransferase subunit alpha) (Rab GG transferase alpha) (Rab GGTase alpha) (Rab geranylgeranyltransferase subunit alpha)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein geranylgeranylation [GO:0018344]	hit with GO BP
GN010979	Chromosome_5A	10132	9	268	36.58705092775365	0.7913248995316822	1.727418004718058	265	0	1.3456090651558075	79	0	1.831927886013376	186	0	2.097168822090178	48	0	unmethylated (<10%)	O57321	Excitatory amino acid transporter 1 (SEAAT1) (Sodium-dependent glutamate/aspartate transporter) (GLAST)	chloride transmembrane transport [GO:1902476]; D-aspartate import across plasma membrane [GO:0070779]; L-aspartate import across plasma membrane [GO:0140009]; L-glutamate import across plasma membrane [GO:0098712]; potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN010980	Chromosome_5A	3565	4	36	34.922861150070126	0.33741186120736344	59.16	36	0.6388888888888888	48.29612220916569	15	0.5333333333333333	64.76652516676774	21	0.7142857142857143	5.0489826676714396	71	0	methylated (>=50%)	Q95JY5	Sterile alpha motif domain-containing protein 15 (SAM domain-containing protein 15)	NA	hit, no GO BP
GN010981	Chromosome_5A	2079	2	35	37.999037999038	0.46809564551717925	1.7463933181473046	34	0	1.2987012987012987	14	0	1.8830525272547076	20	0	73.50163458045768	58	0.8448275862068966	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010982	Chromosome_5A	501	1	8	44.31137724550898	0.3373737373737374	3.314917127071823	8	0	3.314917127071823	8	0	NA	NA	NA	4.158607350096712	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010983	Chromosome_5A	471	1	8	44.79830148619958	0.34811529933481156	3.3333333333333335	2	0	3.3333333333333335	2	0	NA	NA	NA	0.7425742574257426	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN010984	Chromosome_5A	501	1	8	44.510978043912175	0.3336663336663337	2.830188679245283	6	0	2.830188679245283	6	0	NA	NA	NA	0.9036144578313253	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010987	Chromosome_5A	4467	2	171	42.377434519811956	0.8530502254752401	0.7555646314069838	164	0	1.0522213561964147	112	0	0.429000429000429	52	0	1.09717868338558	55	0	unmethylated (<10%)	Q6NRE4	GRB2-associated and regulator of MAPK protein (GRB2-associated and regulator of MAPK1)	cellular response to epidermal growth factor stimulus [GO:0071364]; epidermal growth factor receptor signaling pathway [GO:0007173]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]	hit with GO BP
GN010988	Chromosome_5A	1065	1	57	46.57276995305164	0.9889545965495332	0.6388575723412251	57	0	0.6388575723412251	57	0	NA	NA	NA	0.8174386920980926	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010989	Chromosome_5A	489	1	24	47.852760736196316	0.8573933372296902	0.5141388174807198	24	0	0.5141388174807198	24	0	NA	NA	NA	1.109350237717908	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010990	Chromosome_5A	657	1	5	35.920852359208524	0.23607617678763923	0.6944444444444444	5	0	0.6944444444444444	5	0	NA	NA	NA	0.7262823422605538	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010991	Chromosome_5A	543	1	29	43.83057090239411	1.129951205510907	0.23980815347721823	29	0	0.23980815347721823	29	0	NA	NA	NA	6.487061325771003	65	0	unmethylated (<10%)	Q55G87	Calcineurin subunit B type 1 (Calcineurin regulatory subunit 1) (Protein phosphatase 2B regulatory subunit 1)	calcineurin-mediated signaling [GO:0097720]; positive regulation of sorocarp stalk cell differentiation [GO:0031287]; response to cation stress [GO:0043157]	hit with GO BP
GN010992	Chromosome_5A	3735	5	46	34.91298527443106	0.4048541973490427	75.42468856172141	46	0.8695652173913043	85.9504132231405	20	0.95	70.47724750277469	26	0.8076923076923077	0.7369432874078821	69	0	methylated (>=50%)	Q32L77	Cilia- and flagella-associated protein 95	flagellated sperm motility [GO:0030317]	hit with GO BP
GN010993	Chromosome_5A	78068	73	1146	36.55787262386637	0.4433167368976029	83.0777706363052	1106	0.930379746835443	88.54622391164025	316	0.9208860759493671	81.59445946734627	790	0.9341772151898734	0.5442670537010159	44	0	methylated (>=50%)	Q00174	Laminin subunit alpha (Laminin A chain)	animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; basement membrane organization [GO:0071711]; cell adhesion mediated by integrin [GO:0033627]; dorsal trunk growth, open tracheal system [GO:0035001]; heart development [GO:0007507]; melanotic encapsulation of foreign target [GO:0035011]; mesoderm development [GO:0007498]; negative regulation of synaptic assembly at neuromuscular junction [GO:0045886]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; substrate adhesion-dependent cell spreading [GO:0034446]; tissue development [GO:0009888]	hit with GO BP
GN010994	Chromosome_5A	1434	1	53	45.04881450488145	0.732528216051584	7.381615598885793	52	0	7.381615598885793	52	0	NA	NA	NA	3.2479700187382887	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010995	Chromosome_5A	45724	20	462	35.87831335841134	0.3240660420413971	77.36601334620389	421	0.8978622327790974	86.04982206405694	60	0.9666666666666667	76.20497692344293	361	0.8864265927977839	31.80837289598619	36	0.3611111111111111	methylated (>=50%)	Q9I9B9	Choline transporter-like protein 1 (Solute carrier family 44 member 1)	choline transport [GO:0015871]; ethanolamine transport [GO:0034229]	hit with GO BP
GN010996	Chromosome_5A	26574	11	320	36.042748551215475	0.37191100303632324	88.90013666042415	315	0.9841269841269841	94.42204301075269	59	1	87.92086288063882	256	0.98046875	90.52823315118397	24	1	methylated (>=50%)	Q9ESN3	Post-GPI attachment to proteins factor 6 (EC 3.1.1.4) (GPI processing phospholipase A2) (GPI-PLA2) (M83 protein) (Transmembrane protein 8) (Transmembrane protein 8A)	NA	hit, no GO BP
GN010997	Chromosome_5A	516	1	10	44.96124031007752	0.3891402714932127	72.61904761904762	10	1	72.61904761904762	10	1	NA	NA	NA	77.35004476275739	23	0.9130434782608695	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010998	Chromosome_5A	1374	1	78	45.56040756914119	1.0943400079646288	1.597444089456869	78	0	1.597444089456869	78	0	NA	NA	NA	5.1683262209578	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010999	Chromosome_5A	21410	9	282	36.66978047641289	0.4000837591421049	75.80429643334361	280	0.8571428571428571	59.77473853580048	26	0.6923076923076923	76.898160856437	254	0.8740157480314961	0.8398320335932813	47	0	methylated (>=50%)	Q0GGW5	Serine/threonine-protein kinase STK11 (EC 2.7.11.1) (Liver kinase B1 homolog) (LKB1)	activation of protein kinase activity [GO:0032147]; cellular response to starvation [GO:0009267]; DNA damage response [GO:0006974]; establishment of cell polarity [GO:0030010]; glucose homeostasis [GO:0042593]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cell growth [GO:0030308]; positive regulation of vesicle transport along microtubule [GO:1901610]; protein autophosphorylation [GO:0046777]; protein dephosphorylation [GO:0006470]; protein phosphorylation [GO:0006468]; regulation of cell growth [GO:0001558]; regulation of Wnt signaling pathway [GO:0030111]; response to ionizing radiation [GO:0010212]; response to xenobiotic stimulus [GO:0009410]; vasculature development [GO:0001944]	hit with GO BP
GN011000	Chromosome_5A	7302	13	118	36.55162969049575	0.48636639199628806	74.69094776020205	118	0.8389830508474576	82.79883381924198	40	0.9	71.6376944190302	78	0.8076923076923077	1.2960082944530844	41	0	methylated (>=50%)	Q8JFW1	Asparagine synthetase domain-containing protein 1	NA	hit, no GO BP
GN011012	Chromosome_5A	8075	24	265	40.96594427244582	0.7827531842357468	26.446448475022798	265	0.1660377358490566	34.62700090607068	183	0.22404371584699453	9.762858022790269	82	0.036585365853658534	0.6075334143377886	43	0	sparse (10-50%)	Q9R244	Short transient receptor potential channel 2 (TrpC2) (Transient receptor protein 2) (TRP-2) (mTrp2)	acrosome reaction [GO:0007340]; aggressive behavior [GO:0002118]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; female courtship behavior [GO:0008050]; inter-male aggressive behavior [GO:0002121]; mating behavior, sex discrimination [GO:0048047]; negative regulation of male mating behavior [GO:1902436]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; regulation of cytosolic calcium ion concentration [GO:0051480]; regulation of gene expression [GO:0010468]; response to decreased oxygen levels [GO:0036293]; response to pheromone [GO:0019236]; single fertilization [GO:0007338]; single strand break repair [GO:0000012]; territorial aggressive behavior [GO:0002124]	hit with GO BP
GN011005	Chromosome_5A	351	1	4	51.851851851851855	0.17055393586005832	70.37037037037037	4	1	70.37037037037037	4	1	NA	NA	NA	82.03033838973163	18	0.8888888888888888	NA	NA	NA	NA	no Swiss-Prot hit
GN011010	Chromosome_5A	243	1	9	48.148148148148145	0.6428571428571429	86.42384105960265	9	1	86.42384105960265	9	1	NA	NA	NA	43.81868131868132	10	0.5	methylated (>=50%)	Q6PD10	Inositol hexakisphosphate kinase 1 (InsP6 kinase 1) (EC 2.7.4.21) (Inositol hexaphosphate kinase 1)	inositol metabolic process [GO:0006020]; inositol phosphate biosynthetic process [GO:0032958]; negative regulation of cold-induced thermogenesis [GO:0120163]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]	hit with GO BP
GN011003	Chromosome_5A	321	1	9	51.71339563862929	0.5732142857142857	92.3489932885906	9	1	92.3489932885906	9	1	NA	NA	NA	94.49592811008144	66	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011002	Chromosome_5A	531	1	16	52.35404896421846	0.5780771586037967	94.52887537993921	16	1	94.52887537993921	16	1	NA	NA	NA	93.96676300578035	58	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011001	Chromosome_5A	293	1	10	54.26621160409557	0.6751152073732719	96.89119170984456	10	1	96.89119170984456	10	1	NA	NA	NA	85.44973544973546	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011009	Chromosome_5A	349	1	12	54.154727793696274	0.6901779828609097	92.1146953405018	12	1	92.1146953405018	12	1	NA	NA	NA	83.27953518398967	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011007	Chromosome_5A	363	1	7	51.515151515151516	0.4244904777814901	95.82366589327147	7	1	95.82366589327147	7	1	NA	NA	NA	81.69204737732656	48	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011014	Chromosome_5A	8052	7	114	32.21559860904123	0.5534711331311015	93.99158559032342	114	1	94.80443666082896	30	1	93.75530290174784	84	1	89.9849774661993	43	1	methylated (>=50%)	P68102	Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha) (eIF2-alpha)	cellular response to amino acid starvation [GO:0034198]; cellular response to oxidative stress [GO:0034599]; cellular response to UV [GO:0034644]; HRI-mediated signaling [GO:0140468]; mitophagy [GO:0000423]; negative regulation of translational initiation in response to stress [GO:0032057]; PERK-mediated unfolded protein response [GO:0036499]; regulation of translation in response to endoplasmic reticulum stress [GO:0036490]; regulation of translational initiation in response to stress [GO:0043558]; response to endoplasmic reticulum stress [GO:0034976]; stress granule assembly [GO:0034063]; translation [GO:0006412]; translational initiation [GO:0006413]	hit with GO BP
GN011015	Chromosome_5A	744	1	20	39.91935483870968	0.6747687284600036	21.814848762603116	20	0.2	21.814848762603116	20	0.2	NA	NA	NA	38.51744186046512	40	0.4	sparse (10-50%)	Q1T7C1	Centromere protein K (CENP-K)	kinetochore assembly [GO:0051382]; mitotic sister chromatid segregation [GO:0000070]	hit with GO BP
GN011016	Chromosome_5A	15449	4	234	35.62042850669946	0.47858075793628624	84.80763830384723	234	0.9145299145299145	82.6158940397351	44	0.8636363636363636	85.0107394906413	190	0.9263157894736842	39.263803680981596	16	0.5	methylated (>=50%)	Q6UXP7	Protein FAM151B	photoreceptor cell development [GO:0042461]	hit with GO BP
GN011017	Chromosome_5A	1224	1	1	50	0.074853228962818	NA	0	NA	NA	NA	NA	NA	NA	NA	86.95090439276485	40	1	NA	NA	NA	NA	no Swiss-Prot hit
GN011018	Chromosome_5A	2939	5	82	37.52977203130317	0.7941934420827155	0.5555555555555556	82	0	0.37064492216456635	26	0	0.658165364047717	56	0	0.5886970172684458	45	0	unmethylated (<10%)	Q9JMA7	Cytochrome P450 3A41 (EC 1.14.14.1)	alkaloid catabolic process [GO:0009822]; estrogen metabolic process [GO:0008210]; lipid hydroxylation [GO:0002933]; oxidative demethylation [GO:0070989]; regulation of gene expression [GO:0010468]; response to bacterium [GO:0009617]; retinoic acid metabolic process [GO:0042573]; steroid metabolic process [GO:0008202]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN011019	Chromosome_5A	291	1	38	52.92096219931271	1.9288330716902145	0.3937007874015748	20	0	0.3937007874015748	20	0	NA	NA	NA	1.243144424131627	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011020	Chromosome_5A	1656	1	94	48.671497584541065	0.9606042654028436	0.8272058823529411	68	0	0.8272058823529411	68	0	NA	NA	NA	0.4014049172102358	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011021	Chromosome_5A	7144	5	135	37.66797312430011	0.5355429393890933	90.63581056900871	135	0.8814814814814815	90.16528925619835	27	0.8148148148148148	90.71518193224593	108	0.8981481481481481	0.5521472392638037	67	0	methylated (>=50%)	Q9NA75	Trimeric intracellular cation channel type 1B.1 (TRIC-1B.1) (TRIC-B1)	potassium ion transmembrane transport [GO:0071805]	hit with GO BP
GN011022	Chromosome_5A	4321	4	43	38.32446193010877	0.27418200491984956	87.74422735346359	40	0.975	92.65822784810126	10	1	85.08891928864568	30	0.9666666666666667	32.07171314741036	40	0.325	methylated (>=50%)	Q6PID6	Tetratricopeptide repeat protein 33 (TPR repeat protein 33) (Osmosis-responsive factor)	NA	hit, no GO BP
GN011023	Chromosome_5A	14749	10	153	36.138043257169976	0.3224977416124537	84.21175919419068	153	0.9215686274509803	65.47795938583457	42	0.7380952380952381	90.01380579843534	111	0.990990990990991	23.047304730473048	25	0.36	methylated (>=50%)	Q7ZV90	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; telomere maintenance [GO:0000723]	hit with GO BP
GN011024	Chromosome_5A	2748	4	86	40.793304221251816	0.7523542108379654	20.145454545454545	86	0	18.80178457616316	60	0	21.93056731583404	26	0	0.46511627906976744	27	0	sparse (10-50%)	Q8C206	G protein-coupled receptor 157	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; circadian behavior [GO:0048512]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; radial glial cell differentiation [GO:0060019]	hit with GO BP
GN011025	Chromosome_5A	1179	1	41	40.28837998303647	0.8569832996489735	0.7911392405063291	41	0	0.7911392405063291	41	0	NA	NA	NA	2.4084460574067963	49	0	unmethylated (<10%)	Q27218	Acetylcholine receptor subunit beta-type lev-1 (Levamisole-resistant protein 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of egg-laying behavior [GO:0046662]; regulation of locomotion [GO:0040012]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]; transmembrane transport [GO:0055085]	hit with GO BP
GN011026	Chromosome_5A	13453	11	147	34.49044822716123	0.36771566019169794	89.66137249026072	137	0.9635036496350365	95.1822112415071	40	1	87.89317507418397	97	0.9484536082474226	84.79087452471482	26	0.9615384615384616	methylated (>=50%)	P18754	Regulator of chromosome condensation (Cell cycle regulatory protein) (Chromosome condensation protein 1)	chromosome segregation [GO:0007059]; G1/S transition of mitotic cell cycle [GO:0000082]; mitotic nuclear membrane reassembly [GO:0007084]; mitotic spindle organization [GO:0007052]; positive regulation of cell cycle process [GO:0090068]; regulation of mitotic cell cycle [GO:0007346]; regulation of mitotic nuclear division [GO:0007088]; regulation of mitotic spindle assembly [GO:1901673]; spindle assembly [GO:0051225]; viral process [GO:0016032]	hit with GO BP
GN011027	Chromosome_5A	258	1	12	51.93798449612403	0.6898395721925134	64.21800947867298	12	0.6666666666666666	64.21800947867298	12	0.6666666666666666	NA	NA	NA	65.9078186228774	54	0.5555555555555556	methylated (>=50%)	Q9VHI4	Splicing factor 3B subunit 5 (Pre-mRNA-splicing factor SF3b 10 kDa subunit)	mRNA splicing, via spliceosome [GO:0000398]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of gene expression [GO:0010468]	hit with GO BP
GN011028	Chromosome_5A	1382	3	61	43.92185238784371	0.9194040919600401	1.0046367851622875	46	0	1.080550098231827	42	0	0.7246376811594203	4	0	0.6519377037305324	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011029	Chromosome_5A	31592	20	440	35.619777158774376	0.43980863479697646	85.63884156729131	428	0.9626168224299065	90.41758241758242	56	0.9642857142857143	85.23730378578024	372	0.9623655913978495	64.61187214611873	34	0.6470588235294118	methylated (>=50%)	Q9UBC2	Epidermal growth factor receptor substrate 15-like 1 (Eps15-related protein) (Eps15R)	synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN011030	Chromosome_5A	15682	8	199	36.07958168600944	0.38993197377511124	92.26777815583532	189	0.9947089947089947	95.27950310559007	44	1	91.78986792824759	145	0.993103448275862	90.49098819142324	28	1	methylated (>=50%)	Q5TB30	DEP domain-containing protein 1A	intracellular signal transduction [GO:0035556]; negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN011034	Chromosome_5A	360	1	12	43.611111111111114	0.7093596059113301	0	12	0	0	12	0	NA	NA	NA	0.82063305978898	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011035	Chromosome_5A	4747	3	6	45.5024225826838	0.02506944664490848	2.4096385542168677	4	0	2.4096385542168677	4	0	NA	NA	NA	1.3043478260869565	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011036	Chromosome_5A	3126	3	91	39.60332693538068	0.7426535087719298	0.9782001117942984	91	0	0.6507592190889371	23	0	1.091867469879518	68	0	0.4459308807134894	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011037	Chromosome_5A	13620	4	129	41.093979441997064	0.24363768375995604	82.96036667565382	73	0.9726027397260274	90.3030303030303	12	1	82.24326723882805	61	0.9672131147540983	94.70614625392552	96	1	methylated (>=50%)	P0C7N0	RWD domain-containing protein 3 (RWD domain-containing sumoylation enhancer) (RSUME)	positive regulation of hypoxia-inducible factor-1alpha signaling pathway [GO:1902073]; positive regulation of protein sumoylation [GO:0033235]	hit with GO BP
GN011038	Chromosome_5A	558	1	50	55.19713261648746	1.1772151898734178	93.69894982497082	50	1	93.69894982497082	50	1	NA	NA	NA	93.76854599406528	34	0.9705882352941176	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011039	Chromosome_5A	11995	8	181	36.44852021675698	0.4572679571968742	79.09485155120649	180	0.9277777777777778	79.8984771573604	57	0.9122807017543859	78.86942901893778	123	0.9349593495934959	32.25	49	0.46938775510204084	methylated (>=50%)	Q92624	Amyloid protein-binding protein 2 (Amyloid beta precursor protein-binding protein 2) (APP-BP2) (Protein interacting with APP tail 1)	intracellular protein transport [GO:0006886]; intracellular transport [GO:0046907]; negative regulation of beige fat cell differentiation [GO:0160276]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN011040	Chromosome_5A	2674	5	55	39.49139865370232	0.528726375921685	69.33667083854819	54	0.7777777777777778	80.79673135852912	24	0.9166666666666666	61.42454160789845	30	0.6666666666666666	59.52068286277085	54	0.7222222222222222	methylated (>=50%)	O88696	ATP-dependent Clp protease proteolytic subunit, mitochondrial (EC 3.4.21.92) (Caseinolytic mitochondrial matrix peptidase proteolytic subunit) (Endopeptidase Clp)	membrane protein proteolysis [GO:0033619]; protein catabolic process [GO:0030163]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; proteolysis [GO:0006508]	hit with GO BP
GN011041	Chromosome_5A	19009	15	235	37.655847230259354	0.3487415842983983	74.55923997442221	234	0.8760683760683761	71.06631989596879	40	0.85	75.1301944946328	194	0.8814432989690721	73.58490566037736	14	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011042	Chromosome_5A	362	2	3	39.50276243093923	0.21327572663000785	85.08771929824562	3	1	85.08771929824562	3	1	NA	NA	NA	81.61559888579387	24	0.9583333333333334	NA	NA	NA	NA	no Swiss-Prot hit
GN011043	Chromosome_5A	1356	2	54	41.3716814159292	0.932219789173499	0.4239284032030146	54	0	0.39777247414478917	31	0	0.4618937644341801	23	0	0.7346938775510204	71	0	unmethylated (<10%)	Q95KD9	GTP-binding protein Di-Ras2 (EC 3.6.5.-) (Distinct subgroup of the Ras family member 2)	signal transduction [GO:0007165]	hit with GO BP
GN011044	Chromosome_5A	777	1	51	49.67824967824968	1.0753887486770333	0.7772020725388601	45	0	0.7772020725388601	45	0	NA	NA	NA	0.5764966740576497	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011045	Chromosome_5A	17011	6	161	29.151725354182588	0.4471931588584469	85.69317174105824	160	0.975	91.88445667125173	27	1	84.6578493387004	133	0.9699248120300752	0.8886565603763722	44	0	methylated (>=50%)	P97864	Caspase-7 (CASP-7) (EC 3.4.22.60) (Apoptotic protease Mch-3) (Cysteine protease LICE2) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	apoptotic process [GO:0006915]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to staurosporine [GO:0072734]; ceramide biosynthetic process [GO:0046513]; defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; heart development [GO:0007507]; lymphocyte apoptotic process [GO:0070227]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron apoptotic process [GO:0051402]; plasma membrane repair [GO:0001778]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein poly-ADP-ribosylation [GO:0070212]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of transcription by RNA polymerase II [GO:0006357]; response to UV [GO:0009411]; striated muscle cell differentiation [GO:0051146]	hit with GO BP
GN011046	Chromosome_5A	16473	16	216	34.0982213318764	0.4545499605768705	92.0595846746197	216	0.9953703703703703	95.91368227731864	42	1	91.44529820709843	174	0.9942528735632183	42.249602543720194	36	0.5	methylated (>=50%)	B2RS91	RNA polymerase I-specific transcription initiation factor RRN3	cell population proliferation [GO:0008283]; cytoplasm organization [GO:0007028]; DNA-templated transcription initiation [GO:0006352]; homeostasis of number of cells [GO:0048872]; in utero embryonic development [GO:0001701]; negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO:1902254]; nucleolus organization [GO:0007000]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of neuron projection development [GO:0010976]; regulation of DNA-templated transcription initiation [GO:2000142]; ribosome biogenesis [GO:0042254]; transcription initiation at RNA polymerase I promoter [GO:0006361]	hit with GO BP
GN011047	Chromosome_5A	8952	7	90	34.14879356568365	0.3616576784923927	86.07448912326961	90	0.9111111111111111	83.0932999373826	30	0.8666666666666667	87.13934242898681	60	0.9333333333333333	40.85896691816599	23	0.5217391304347826	methylated (>=50%)	Q09003	Coilin (Sphere organelles protein SPH-1) (Sphere protein 1)	spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN011048	Chromosome_5A	1434	4	4	44.56066945606695	0.056192323517310294	82.3529411764706	2	1	82.3529411764706	2	1	NA	NA	NA	95.44235924932975	21	1	NA	NA	NA	NA	no Swiss-Prot hit
GN011049	Chromosome_5A	20066	18	285	35.791886773646965	0.4497809457054914	88.66785079928952	278	0.9640287769784173	92.66755142667552	53	0.9811320754716981	87.79907754396079	225	0.96	89.91617983235966	37	1	methylated (>=50%)	Q6DDU8	Fidgetin-like protein 1 (EC 3.6.4.-)	ATP metabolic process [GO:0046034]; DNA recombinase disassembly [GO:1990986]; double-strand break repair involved in meiotic recombination [GO:1990918]; microtubule severing [GO:0051013]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; protein hexamerization [GO:0034214]	hit with GO BP
GN011050	Chromosome_5A	565	2	4	33.6283185840708	0.26748727660078114	95.43859649122807	4	1	95.43859649122807	4	1	NA	NA	NA	78	12	0.75	NA	Q5QJE6	Deoxynucleotidyltransferase terminal-interacting protein 2 (Estrogen receptor-binding protein) (LPTS-interacting protein 2) (LPTS-RP2) (Terminal deoxynucleotidyltransferase-interacting factor 2) (TdIF2) (TdT-interacting factor 2)	maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit biogenesis [GO:0042274]; RNA processing [GO:0006396]	hit with GO BP
GN011051	Chromosome_5A	37551	10	781	35.62621501424729	0.6565596162925064	34.77486069976407	756	0.26322751322751325	53.31246739697444	36	0.5555555555555556	33.83783783783784	720	0.24861111111111112	0.8	66	0	sparse (10-50%)	Q96SJ8	Tetraspanin-18 (Tspan-18)	calcium-ion regulated exocytosis [GO:0017156]; calcium-mediated signaling [GO:0019722]; inflammatory response [GO:0006954]; protein localization to cell periphery [GO:1990778]; regulation of sprouting angiogenesis [GO:1903670]; regulation of store-operated calcium entry [GO:2001256]	hit with GO BP
GN011078	Chromosome_5A	15327	15	162	35.421152215045346	0.33740625769465543	89.66731535538875	162	0.9567901234567902	88.3668903803132	27	0.8888888888888888	89.85185185185185	135	0.9703703703703703	50.783938814531545	44	0.4772727272727273	methylated (>=50%)	O46629	Trifunctional enzyme subunit beta, mitochondrial (TP-beta) [Includes: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (3-oxoacyl-CoA thiolase) (Acetyl-CoA acyltransferase) (Beta-ketothiolase) (Long chain 3-ketoacyl-CoA thiolase) (LCKAT)]	fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN011077	Chromosome_5A	22570	21	418	38.201151971643775	0.508502192929384	87.22478576137112	365	0.936986301369863	89.70260223048327	57	0.9298245614035088	86.8925990530775	308	0.9383116883116883	65.50330639235855	41	0.5853658536585366	methylated (>=50%)	Q8BMS1	Trifunctional enzyme subunit alpha, mitochondrial (Monolysocardiolipin acyltransferase) (MLCL AT) (EC 2.3.1.-) (TP-alpha) [Includes: Long-chain enoyl-CoA hydratase (LCEH) (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (LCHAD) (EC 1.1.1.211)]	cardiolipin acyl-chain remodeling [GO:0035965]; fatty acid beta-oxidation [GO:0006635]; response to insulin [GO:0032868]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN011076	Chromosome_5A	14035	6	123	35.105094406840045	0.29675211823981107	79.06408241662301	118	0.8135593220338984	81.97424892703863	24	0.9166666666666666	78.32091188075405	94	0.7872340425531915	87.84810126582279	33	0.9393939393939394	methylated (>=50%)	O97860	Tartrate-resistant acid phosphatase type 5 (TR-AP) (EC 3.1.3.2) (Purple acid phosphatase) (Tartrate-resistant acid ATPase) (TrATPase) (Type 5 acid phosphatase)	bone resorption [GO:0045453]	hit with GO BP
GN011075	Chromosome_5A	31703	28	400	36.26155253446046	0.38421732474977716	80.76738147898837	394	0.9416243654822335	87.11127089699802	124	0.967741935483871	78.4509353462422	270	0.9296296296296296	15.763135946622185	31	0.22580645161290322	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011074	Chromosome_5A	33598	23	439	37.74331805464611	0.3700087154300943	83.58208955223881	404	0.9702970297029703	88.96343508889635	68	0.9705882352941176	82.95285165136895	336	0.9702380952380952	0.893236920459379	48	0	methylated (>=50%)	O95347	Structural maintenance of chromosomes protein 2 (SMC protein 2) (SMC-2) (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog)	B cell differentiation [GO:0030183]; cerebral cortex development [GO:0021987]; immunoglobulin heavy chain V-D-J recombination [GO:0071707]; mitotic chromosome condensation [GO:0007076]; positive regulation of chromosome condensation [GO:1905821]; positive regulation of chromosome segregation [GO:0051984]; positive regulation of chromosome separation [GO:1905820]	hit with GO BP
GN011073	Chromosome_5A	2935	3	39	37.921635434412266	0.3717772162423754	86.2036156041865	39	0.9230769230769231	94.75032010243278	13	1	81.15064345193035	26	0.8846153846153846	90.13104013104014	30	1	methylated (>=50%)	P50533	Structural maintenance of chromosomes protein 2 (SMC protein 2) (SMC-2) (Chromosome assembly protein XCAP-E) (Chromosome-associated protein E)	chromosome organization [GO:0051276]	hit with GO BP
GN011072	Chromosome_5A	3072	4	47	36.62109375	0.45671772096642566	47.97136038186157	47	0.5319148936170213	92	8	1	39.99194522754732	39	0.4358974358974359	89.82316853121617	35	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011071	Chromosome_5A	24761	14	307	33.13274908121643	0.45178455036168014	83.21601888689722	306	0.9281045751633987	85.3921568627451	53	0.8679245283018868	82.87992732044617	253	0.9407114624505929	43.470790378006875	35	0.42857142857142855	methylated (>=50%)	Q8TDD5	Mucolipin-3 (Transient receptor potential channel mucolipin 3) (TRPML3)	calcium ion transmembrane transport [GO:0070588]	hit with GO BP
GN011070	Chromosome_5A	291	1	3	44.67353951890034	0.20840296013368345	83.52941176470588	3	1	83.52941176470588	3	1	NA	NA	NA	79.30672268907563	33	0.9090909090909091	NA	NA	NA	NA	no Swiss-Prot hit
GN011069	Chromosome_5A	4140	2	187	43.38164251207729	0.9746646120377085	85.90339892665475	151	0.9801324503311258	86.95652173913044	146	0.9794520547945206	79.21052631578948	5	1	82.53719655442443	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011068	Chromosome_5A	657	1	15	42.465753424657535	0.5087764584408879	84.85958485958486	15	0.9333333333333333	84.85958485958486	15	0.9333333333333333	NA	NA	NA	86.33540372670808	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011067	Chromosome_5A	5756	2	85	38.0993745656706	0.41905561313199663	76.96724797958315	85	0.8117647058823529	73.05287094940307	44	0.7727272727272727	79.30682976554536	41	0.8536585365853658	0.8541793776693105	64	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011063	Chromosome_5A	26212	19	292	36.303982908591486	0.34765121052861314	78.75534528250387	287	0.867595818815331	70.21963824289406	64	0.71875	80.15461188181722	223	0.9103139013452914	85.05663134819144	105	0.9523809523809523	methylated (>=50%)	Q3U487	E3 ubiquitin-protein ligase HECTD3 (EC 2.3.2.26) (HECT domain-containing protein 3) (HECT-type E3 ubiquitin transferase HECTD3)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN011062	Chromosome_5A	17246	3	404	33.451235069001505	0.8373919424907978	0.9409304756926293	368	0	0.5857740585774058	39	0	0.9623135832325675	329	0	0.5643340857787811	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011061	Chromosome_5A	345	1	12	37.68115942028985	0.9801136363636364	0.5284015852047557	12	0	0.5284015852047557	12	0	NA	NA	NA	0.8422416585681892	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011060	Chromosome_5A	579	1	29	45.59585492227979	0.9672235023041474	4.094827586206897	29	0	4.094827586206897	29	0	NA	NA	NA	1.0108303249097472	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017533	Chromosome_5A	402	1	15	48.756218905472636	0.6279287722586692	0.5154639175257731	15	0	0.5154639175257731	15	0	NA	NA	NA	0.6158583525789069	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011059	Chromosome_5A	222	1	0	54.5045045045045	0	NA	0	NA	NA	NA	NA	NA	NA	NA	83.92077878482712	38	1	NA	NA	NA	NA	no Swiss-Prot hit
GN011058	Chromosome_5A	4847	9	28	37.63152465442542	0.16758372024103527	87.12166172106825	26	1	90.978886756238	17	1	80.87091757387248	9	1	83.6963696369637	34	0.9705882352941176	methylated (>=50%)	Q9FE17	NAD-dependent protein deacetylase SRT1 (EC 2.3.1.286) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1)	ethylene-activated signaling pathway [GO:0009873]; negative regulation of transcription by RNA polymerase II [GO:0000122]	hit with GO BP
GN011057	Chromosome_5A	24210	8	189	38.76084262701363	0.24547304642979095	75.14901421366346	126	0.8333333333333334	69.3446088794926	20	0.75	75.8549755721265	106	0.8490566037735849	44.11764705882353	21	0.5238095238095238	methylated (>=50%)	B0WEV5	ATPase ASNA1 homolog (EC 3.6.-.-) (Arsenical pump-driving ATPase homolog) (Arsenite-stimulated ATPase)	tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN011056	Chromosome_5A	1438	2	50	42.14186369958276	0.7831817439137302	40.75734927752865	50	0.56	87.06521739130434	29	0.9655172413793104	1.5639374425022998	21	0	0.7151370679380215	56	0	sparse (10-50%)	Q9GZN2	Homeobox protein TGIF2 (5'-TG-3'-interacting factor 2) (TGF-beta-induced transcription factor 2) (TGFB-induced factor 2)	negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN011055	Chromosome_5A	22527	13	375	36.724819105961735	0.4953529282415891	83.79545955477188	364	0.9505494505494505	87.40974729241877	51	0.9607843137254902	83.40417216278274	313	0.9488817891373802	6.485298158834845	48	0	methylated (>=50%)	Q5H8A4	GPI ethanolamine phosphate transferase 2, catalytic subunit (EC 2.-.-.-) (GPI7 homolog) (hGPI7) (Phosphatidylinositol-glycan biosynthesis class G protein) (PIG-G)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN011054	Chromosome_5A	8689	4	149	35.59673149959719	0.541347626980304	79.05921416712783	145	0.8482758620689655	84.56221198156682	17	0.8823529411764706	78.4743479857965	128	0.84375	51.267991775188484	27	0.5555555555555556	methylated (>=50%)	Q09506	Tax1-binding protein 3 homolog	NA	hit, no GO BP
GN011053	Chromosome_5A	420	1	19	47.142857142857146	0.8360398114195914	52.83018867924528	4	0.75	52.83018867924528	4	0.75	NA	NA	NA	85.03562945368171	14	1	NA	NA	NA	NA	no Swiss-Prot hit
GN011052	Chromosome_5A	461	1	18	44.03470715835141	0.807041431628088	0.7874015748031497	12	0	0.7874015748031497	12	0	NA	NA	NA	0.9140767824497258	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011085	Chromosome_5A	26200	19	276	36.67557251908397	0.31880929893962134	73.73470266281286	275	0.8581818181818182	85.4683879510096	80	0.9625	71.05740181268882	195	0.8153846153846154	53.93258426966292	29	0.7241379310344828	methylated (>=50%)	O97827	Adhesion G protein-coupled receptor L3 (Latrophilin-3)	cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion [GO:0098609]; excitatory synapse assembly [GO:1904861]; neuron migration [GO:0001764]; Rho-activating G protein-coupled receptor signaling pathway [GO:0160221]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]	hit with GO BP
GN011084	Chromosome_5A	48854	16	309	40.011053342612684	0.16721279291203808	82.41044154401555	286	0.9090909090909091	86.30319148936171	58	0.9137931034482759	81.62965926518638	228	0.9078947368421053	49.00523560209424	34	0.5	methylated (>=50%)	Q69Z66	Deubiquitinase MYSM1 (2A-DUB) (EC 3.4.19.-) (Myb-like, SWIRM and MPN domain-containing protein 1)	chromatin remodeling [GO:0006338]; pigmentation [GO:0043473]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell migration [GO:0030334]; regulation of hair follicle development [GO:0051797]; regulation of hemopoiesis [GO:1903706]	hit with GO BP
GN011083	Chromosome_5A	32763	40	453	35.842261087202026	0.4310540430959971	85.75690568951599	441	0.9478458049886621	94.75098814229248	127	1	83.19047189389154	314	0.9267515923566879	93.30798479087453	15	1	methylated (>=50%)	Q7SY48	HEAT repeat-containing protein 1 (Protein BAP28)	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; negative regulation of apoptotic process [GO:0043066]; neural precursor cell proliferation [GO:0061351]; positive regulation of transcription by RNA polymerase I [GO:0045943]; protein localization to nucleolus [GO:1902570]; regulation of RNA stability [GO:0043487]; ribosomal small subunit biogenesis [GO:0042274]; rRNA metabolic process [GO:0016072]	hit with GO BP
GN011082	Chromosome_5A	8646	7	143	37.450844321073326	0.47172139403706687	49.3846556690233	143	0.46153846153846156	39.57415565345081	36	0.3055555555555556	51.51370299553856	107	0.514018691588785	1.453287197231834	34	0	sparse (10-50%)	Q8TB45	DEP domain-containing mTOR-interacting protein (hDEPTOR) (DEP domain-containing protein 6)	G protein-coupled receptor signaling pathway [GO:0007186]; intracellular signal transduction [GO:0035556]; negative regulation of cell size [GO:0045792]; negative regulation of protein kinase activity [GO:0006469]; negative regulation of TOR signaling [GO:0032007]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of TORC2 signaling [GO:1903940]; positive regulation of autophagy [GO:0010508]; regulation of extrinsic apoptotic signaling pathway [GO:2001236]	hit with GO BP
GN011081	Chromosome_5A	20789	9	263	34.94155563038145	0.4162467344562401	73.83313722194207	257	0.8599221789883269	77.95983086680761	41	0.9024390243902439	73.34377937950485	216	0.8518518518518519	1.5104703055269482	61	0	methylated (>=50%)	B1H283	Ciliary microtubule-associated protein 2 (Lymphocyte expansion molecule)	NA	hit, no GO BP
GN011080	Chromosome_5A	1689	1	42	42.51036116044997	0.5513773162541973	0.8980115458627326	42	0	0.8980115458627326	42	0	NA	NA	NA	24.33123524783635	60	0.05	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011079	Chromosome_5A	24423	18	325	35.94562502559063	0.41668385903121996	85.77576693886559	309	0.9514563106796117	86.67982239763197	36	0.8888888888888888	85.6619245822203	273	0.9597069597069597	5.063291139240507	33	0	methylated (>=50%)	Q07598	Sterol carrier protein 2 (SCP-2) (Acetyl-CoA C-myristoyltransferase) (EC 2.3.1.155) (Non-specific lipid-transfer protein) (NSL-TP) (Propanoyl-CoA C-acyltransferase) (EC 2.3.1.176) (SCP-2/3-oxoacyl-CoA thiolase) (SCP-2/thiolase) (EC 2.3.1.16) (SCP-chi) (SCPX) (Sterol carrier protein X) (SCP-X)	bile acid metabolic process [GO:0008206]; fatty acid beta-oxidation [GO:0006635]; lipid transport [GO:0006869]	hit with GO BP
GN011094	Chromosome_5A	600	1	16	48.166666666666664	0.5079365079365079	0.46511627906976744	8	0	0.46511627906976744	8	0	NA	NA	NA	1.13882863340564	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011093	Chromosome_5A	4142	2	100	34.983099951714145	0.7907930459087629	0.5864509605662285	100	0	0.6586483390607102	74	0	0.41293874741913283	26	0	0.4722550177095632	33	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN011092	Chromosome_5A	165	1	8	52.121212121212125	0.7236842105263158	0.4694835680751174	8	0	0.4694835680751174	8	0	NA	NA	NA	0.671892497200448	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011091	Chromosome_5A	264	1	7	49.24242424242424	0.4425287356321839	2.5	7	0	2.5	7	0	NA	NA	NA	0.5277044854881267	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011090	Chromosome_5A	249	1	7	53.81526104417671	0.42223837209302323	0	7	0	0	7	0	NA	NA	NA	0.6086956521739131	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011089	Chromosome_5A	568	2	10	39.61267605633803	0.46926635822868473	0.9419152276295133	10	0	0.9505703422053232	8	0	0.9009009009009009	2	0	1.3123359580052494	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011088	Chromosome_5A	3159	5	64	33.52326685660019	0.7211042550914862	0.8626887131560029	64	0	1.0685103708359522	24	0	0.7358636715724245	40	0	0.7749326145552561	60	0	unmethylated (<10%)	P05183	Cytochrome P450 3A2 (EC 1.14.14.1) (CYPIIIA2) (Cytochrome P450-PCN2) (Cytochrome P450/6-beta-A) (Testosterone 6-beta-hydroxylase)	alkaloid catabolic process [GO:0009822]; estrogen metabolic process [GO:0008210]; glutathione catabolic process [GO:0006751]; lipid hydroxylation [GO:0002933]; monoterpenoid metabolic process [GO:0016098]; oxidative demethylation [GO:0070989]; retinoic acid metabolic process [GO:0042573]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; steroid metabolic process [GO:0008202]; sulfur oxidation [GO:0019417]; vitamin D catabolic process [GO:0042369]; vitamin D metabolic process [GO:0042359]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN011087	Chromosome_5A	2932	3	20	34.95907230559345	0.22328330020637713	19.39163498098859	9	0	21.12676056338028	6	0	12	3	0	23.651452282157678	7	0.2857142857142857	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011086	Chromosome_5A	4752	4	46	32.49158249158249	0.36753037785052434	41.896673743807504	20	0.3	57.74647887323944	8	0.625	31.242603550295858	12	0.08333333333333333	11.835559046870909	62	0	sparse (10-50%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN001179	Chromosome_5A	1677	1	40	41.9200954084675	0.5430611550978773	0	5	0	0	5	0	NA	NA	NA	12.466124661246612	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011097	Chromosome_5A	2027	2	67	37.83917118894919	0.9258105418155046	0.5018820577164367	67	0	0.42533081285444235	45	0	0.6529850746268657	22	0	0.6589268904926263	104	0	unmethylated (<10%)	O95395	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M) (hC2GnT-M) (Core 2/core 4 beta-1,6-N-acetylglucosaminyltransferase) (C2/4GnT)	carbohydrate metabolic process [GO:0005975]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN011098	Chromosome_5A	3144	2	86	35.782442748091604	0.8548448288944533	0.6163328197226502	86	0	0.42402826855123676	30	0	0.7033248081841432	56	0	0.5914467697907189	38	0	unmethylated (<10%)	O95395	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M) (hC2GnT-M) (Core 2/core 4 beta-1,6-N-acetylglucosaminyltransferase) (C2/4GnT)	carbohydrate metabolic process [GO:0005975]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN011099	Chromosome_5A	1660	2	44	38.25301204819277	0.7245600460290063	0.9621166566446182	44	0	1.0678871090770403	35	0	0.5681818181818182	9	0	0.7360672975814931	53	0	unmethylated (<10%)	O95395	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 (EC 2.4.1.102) (EC 2.4.1.148) (EC 2.4.1.150) (C2GnT-mucin type) (C2GnT-M) (hC2GnT-M) (Core 2/core 4 beta-1,6-N-acetylglucosaminyltransferase) (C2/4GnT)	carbohydrate metabolic process [GO:0005975]; protein O-linked glycosylation [GO:0006493]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]	hit with GO BP
GN011111	Chromosome_5A	2661	3	85	38.03081548290117	0.8861243006910817	0.7410838351088467	85	0	0.8271298593879239	54	0	0.631578947368421	31	0	0.6809037449705974	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011110	Chromosome_5A	15250	10	155	34.32786885245902	0.34811967511284897	87.22404371584699	154	0.948051948051948	95.22727272727273	30	1	85.31799729364005	124	0.9354838709677419	4.524627720504009	33	0.06060606060606061	methylated (>=50%)	O15400	Syntaxin-7	intracellular protein transport [GO:0006886]; organelle assembly [GO:0070925]; organelle localization [GO:0051640]; positive regulation of receptor localization to synapse [GO:1902685]; positive regulation of T cell mediated cytotoxicity [GO:0001916]; regulation of protein localization to plasma membrane [GO:1903076]; vesicle docking [GO:0048278]	hit with GO BP
GN011107	Chromosome_5A	17017	10	223	35.7818651936299	0.410650601606506	82.89465090457841	219	0.954337899543379	92.27157818707114	58	1	80.82442991548398	161	0.937888198757764	74.15549597855228	56	0.8928571428571429	methylated (>=50%)	Q4ZIN3	Membralin (Transmembrane protein 259)	positive regulation of ERAD pathway [GO:1904294]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN011106	Chromosome_5A	9307	7	159	36.477919845277746	0.5161563397937765	80.86908690869087	156	0.8653846153846154	71.69500822819528	38	0.7105263157894737	83.17049676620339	118	0.9152542372881356	54.13300186451212	32	0.5625	methylated (>=50%)	Q6AXK4	BRISC and BRCA1-A complex member 1 (Mediator of RAP80 interactions and targeting subunit of 40 kDa) (New component of the BRCA1-A complex)	DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; positive regulation of DNA repair [GO:0045739]; response to ionizing radiation [GO:0010212]	hit with GO BP
GN011105	Chromosome_5A	20449	17	282	34.61782972272483	0.4650135376528671	86.79652663693969	278	0.9280575539568345	95.14455151964418	47	1	85.58606975869297	231	0.9134199134199135	0.6052745352356247	42	0	methylated (>=50%)	P55072	Transitional endoplasmic reticulum ATPase (TER ATPase) (EC 3.6.4.6) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP)	ATP metabolic process [GO:0046034]; autophagosome maturation [GO:0097352]; autophagy [GO:0006914]; cellular response to arsenite ion [GO:1903843]; cellular response to heat [GO:0034605]; cellular response to misfolded protein [GO:0071218]; cytoplasm protein quality control [GO:0140455]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; double-strand break repair [GO:0006302]; endoplasmic reticulum stress-induced pre-emptive quality control [GO:0061857]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; endoplasmic reticulum unfolded protein response [GO:0030968]; endosome to lysosome transport via multivesicular body sorting pathway [GO:0032510]; ERAD pathway [GO:0036503]; establishment of protein localization [GO:0045184]; flavin adenine dinucleotide catabolic process [GO:0072389]; interstrand cross-link repair [GO:0036297]; macroautophagy [GO:0016236]; mitophagy [GO:0000423]; mitotic spindle disassembly [GO:0051228]; NAD+ metabolic process [GO:0019674]; negative regulation of hippo signaling [GO:0035331]; negative regulation of protein localization to chromatin [GO:0120186]; negative regulation of smoothened signaling pathway [GO:0045879]; peptidyl-lysine trimethylation [GO:0018023]; positive regulation of ATP biosynthetic process [GO:2001171]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of mitochondrial membrane potential [GO:0010918]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of oxidative phosphorylation [GO:1903862]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein K63-linked deubiquitination [GO:1903006]; positive regulation of protein-containing complex assembly [GO:0031334]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; protein unfolding [GO:0043335]; protein-DNA covalent cross-linking repair [GO:0106300]; regulation of aerobic respiration [GO:1903715]; regulation of apoptotic process [GO:0042981]; regulation of protein localization to chromatin [GO:1905634]; regulation of synapse organization [GO:0050807]; rescue of stalled cytosolic ribosome [GO:0072344]; retrograde protein transport, ER to cytosol [GO:0030970]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]; stress granule disassembly [GO:0035617]; translesion synthesis [GO:0019985]; ubiquitin-dependent protein catabolic process [GO:0006511]; viral genome replication [GO:0019079]	hit with GO BP
GN011104	Chromosome_5A	162	1	1	53.08641975308642	0.1323529411764706	100	1	1	100	1	1	NA	NA	NA	55.97949886104784	39	0.6153846153846154	NA	NA	NA	NA	no Swiss-Prot hit
GN011103	Chromosome_5A	333	1	5	52.552552552552555	0.30305788132508193	85.57692307692308	5	0.8	85.57692307692308	5	0.8	NA	NA	NA	35.70796460176991	48	0.4166666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011102	Chromosome_5A	18749	25	549	36.231265667502264	0.8922557045865191	2.08777316236229	545	0	2.065091690071039	173	0	2.094119822485207	372	0	0.7216103304215723	58	0	unmethylated (<10%)	Q13635	Protein patched homolog 1 (PTC) (PTC1)	animal organ morphogenesis [GO:0009887]; brain development [GO:0007420]; cellular response to cholesterol [GO:0071397]; commissural neuron axon guidance [GO:0071679]; dorsal/ventral pattern formation [GO:0009953]; embryonic limb morphogenesis [GO:0030326]; limb morphogenesis [GO:0035108]; liver regeneration [GO:0097421]; metanephric collecting duct development [GO:0072205]; negative regulation of cell division [GO:0051782]; negative regulation of multicellular organism growth [GO:0040015]; negative regulation of osteoblast differentiation [GO:0045668]; negative regulation of smoothened signaling pathway [GO:0045879]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural plate axis specification [GO:0021997]; neural tube formation [GO:0001841]; neural tube patterning [GO:0021532]; pharyngeal system development [GO:0060037]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of DNA-templated transcription [GO:0045893]; prostate gland development [GO:0030850]; protein localization to plasma membrane [GO:0072659]; protein processing [GO:0016485]; regulation of protein localization [GO:0032880]; regulation of smoothened signaling pathway [GO:0008589]; response to alkaloid [GO:0043279]; response to estradiol [GO:0032355]; response to mechanical stimulus [GO:0009612]; response to retinoic acid [GO:0032526]; response to xenobiotic stimulus [GO:0009410]; signal transduction [GO:0007165]; smooth muscle tissue development [GO:0048745]; somite development [GO:0061053]; spermatid development [GO:0007286]	hit with GO BP
GN011101	Chromosome_5A	26350	14	683	36.67172675521822	0.7716987960383066	2.4429861607432914	615	0	1.904036557501904	58	0	2.4932518823696546	557	0	2.095808383233533	32	0	unmethylated (<10%)	P24155	Thimet oligopeptidase (EC 3.4.24.15) (Endo-oligopeptidase A) (Endopeptidase 24.15) (PZ-peptidase) (Soluble metallo-endopeptidase)	intracellular signal transduction [GO:0035556]; peptide catabolic process [GO:0043171]; peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]	hit with GO BP
GN011100	Chromosome_5A	19384	17	352	35.58605035080479	0.5742943331178625	89.17100611957885	352	0.9431818181818182	88.37931034482759	58	0.896551724137931	89.26908454013413	294	0.9523809523809523	1.7381857686040196	58	0	methylated (>=50%)	Q8C1A5	Thimet oligopeptidase (EC 3.4.24.15)	intracellular signal transduction [GO:0035556]; peptide catabolic process [GO:0043171]; peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]	hit with GO BP
GN011112	Chromosome_5A	2178	1	84	42.79155188246097	0.8497262049074112	1.3045250713412149	84	0	1.3045250713412149	84	0	NA	NA	NA	0.5500261917234154	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011122	Chromosome_5A	4155	4	123	39.15764139590854	0.7768409244295278	0.7833920877399139	122	0	0.8034026465028355	68	0	0.7692307692307693	54	0	0.704225352112676	45	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN011121	Chromosome_5A	2483	2	51	33.991139750302054	0.7126865671641791	30.82450832072617	51	0.23529411764705882	73.23340471092077	11	1	21.72714745062012	40	0.025	44.978953698135896	27	0.2962962962962963	sparse (10-50%)	Q13309	S-phase kinase-associated protein 2 (Cyclin-A/CDK2-associated protein p45) (F-box protein Skp2) (F-box/LRR-repeat protein 1) (p45skp2)	defense response to virus [GO:0051607]; G1/S transition of mitotic cell cycle [GO:0000082]; innate immune response [GO:0045087]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; regulation of apoptotic process [GO:0042981]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN011120	Chromosome_5A	2516	2	51	34.30047694753577	0.6917677502830342	60.58055650979045	51	0.8823529411764706	55.32710280373832	13	1	61.112161906563266	38	0.8421052631578947	55.82959641255606	18	0.7222222222222222	methylated (>=50%)	Q13309	S-phase kinase-associated protein 2 (Cyclin-A/CDK2-associated protein p45) (F-box protein Skp2) (F-box/LRR-repeat protein 1) (p45skp2)	defense response to virus [GO:0051607]; G1/S transition of mitotic cell cycle [GO:0000082]; innate immune response [GO:0045087]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; regulation of apoptotic process [GO:0042981]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN011118	Chromosome_5A	9893	6	180	37.572020620640856	0.5164076904651016	60.7866134959731	176	0.7556818181818182	89.5040369088812	14	1	58.69820499916121	162	0.7345679012345679	73.15850366371	27	0.8888888888888888	methylated (>=50%)	Q9Z0Z3	S-phase kinase-associated protein 2 (Cyclin-A/CDK2-associated protein p45) (F-box protein Skp2) (F-box/WD-40 protein 1) (FWD1)	defense response to virus [GO:0051607]; DNA double-strand break processing [GO:0000729]; G1/S transition of mitotic cell cycle [GO:0000082]; G2/M transition of mitotic cell cycle [GO:0000086]; innate immune response [GO:0045087]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of intracellular estrogen receptor signaling pathway [GO:0033148]; positive regulation of protein polyubiquitination [GO:1902916]; positive regulation of smooth muscle cell proliferation [GO:0048661]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; protein localization to site of double-strand break [GO:1990166]; protein polyubiquitination [GO:0000209]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN011119	Chromosome_5A	468	1	14	44.65811965811966	0.6412213740458015	19.359756097560975	14	0	19.359756097560975	14	0	NA	NA	NA	41.915227629513346	19	0.15789473684210525	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011115	Chromosome_5A	1927	3	48	37.77893098079917	0.6982358402971216	63.09751434034417	48	0.6041666666666666	65.94827586206897	35	0.6285714285714286	58.42583249243189	13	0.5384615384615384	3.297818366311517	54	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011114	Chromosome_5A	2596	8	25	33.281972265023114	0.34967672413793105	1.7556693489392832	25	0	1.0738255033557047	16	0	2.572347266881029	9	0	0.5526770293609672	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011113	Chromosome_5A	712	3	6	33.848314606741575	0.294824016563147	0.6309148264984227	6	0	0.42016806722689076	4	0	1.2658227848101267	2	0	0.7119741100323624	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011123	Chromosome_5A	432	1	20	43.75	0.9720972097209721	NA	0	NA	NA	NA	NA	NA	NA	NA	39.53488372093023	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011124	Chromosome_5A	432	1	20	43.75	0.9720972097209721	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011125	Chromosome_5A	12331	13	290	36.97996918335902	0.6900093467970433	0.937051311116149	283	0	0.17704337562702863	84	0	1.1986997155627794	199	0	0.526711813393529	28	0	unmethylated (<10%)	Q504Y0	Zinc transporter ZIP12 (LIV-1 subfamily of ZIP zinc transporter 8) (LZT-Hs8) (Solute carrier family 39 member 12) (Zrt- and Irt-like protein 12) (ZIP-12)	intracellular monoatomic cation homeostasis [GO:0030003]; neural tube formation [GO:0001841]; neuron projection extension [GO:1990138]; zinc ion import across plasma membrane [GO:0071578]	hit with GO BP
GN003088	Chromosome_5A	2789	7	34	31.982789530297598	0.48118660151116116	1.6301579215486501	34	0	0.9695290858725761	12	0	2.0145044319097503	22	0	2.4070021881838075	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011126	Chromosome_5A	6577	6	163	34.98555572449445	0.809921519920704	0.5262465465070385	163	0	0.35938903863432164	23	0	0.5548705302096177	140	0	2.187784867821331	84	0	unmethylated (<10%)	Q8WZ42	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS-40.14)	cardiac muscle cell development [GO:0055013]; cardiac muscle contraction [GO:0060048]; cardiac muscle hypertrophy [GO:0003300]; cardiac muscle tissue morphogenesis [GO:0055008]; cardiac myofibril assembly [GO:0055003]; detection of muscle stretch [GO:0035995]; mitotic chromosome condensation [GO:0007076]; muscle contraction [GO:0006936]; muscle filament sliding [GO:0030049]; positive regulation of cAMP/PKA signal transduction [GO:0141163]; positive regulation of gene expression [GO:0010628]; response to calcium ion [GO:0051592]; sarcomere organization [GO:0045214]; sarcomerogenesis [GO:0048769]; skeletal muscle contraction [GO:0003009]; skeletal muscle myosin thick filament assembly [GO:0030241]; skeletal muscle thin filament assembly [GO:0030240]; striated muscle contraction [GO:0006941]	hit with GO BP
GN011128	Chromosome_5A	1962	1	64	39.24566768603466	0.8476077330165245	0.9229881742140179	64	0	0.9229881742140179	64	0	NA	NA	NA	0.8960573476702509	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011127	Chromosome_5A	47527	37	656	36.21309992214952	0.43911729875325195	81.53648218413363	639	0.9765258215962441	80.85216268560362	106	0.9716981132075472	81.67554377771364	533	0.9774859287054409	0.5613472333600642	34	0	methylated (>=50%)	O77819	Rho-associated protein kinase 1 (EC 2.7.11.39) (Corneal epithelial Rho-associated-Ser/Thr kinase 1) (HEBM1) (Rho-associated, coiled-coil-containing protein kinase 1) (Rho-associated, coiled-coil-containing protein kinase I) (ROCK-I) (cAMP-dependent protein kinase ROCK-I) (CePKA) (p160 ROCK-1) (p160ROCK)	actomyosin structure organization [GO:0031032]; cortical actin cytoskeleton organization [GO:0030866]; embryonic morphogenesis [GO:0048598]; mitotic cytokinesis [GO:0000281]; myoblast migration [GO:0051451]; podocyte cell migration [GO:0090521]; positive regulation of focal adhesion assembly [GO:0051894]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell migration [GO:0030334]; regulation of gene expression [GO:0010468]; regulation of microtubule cytoskeleton organization [GO:0070507]; response to transforming growth factor beta [GO:0071559]; Rho protein signal transduction [GO:0007266]	hit with GO BP
GN011132	Chromosome_5A	582	2	7	37.97250859106529	0.33797909407665505	89.95433789954338	7	1	89.95433789954338	7	1	NA	NA	NA	95.5092221331195	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011131	Chromosome_5A	1098	1	34	42.4408014571949	0.7008729935229513	97.385955920041	34	1	97.385955920041	34	1	NA	NA	NA	88.24557570461	62	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011130	Chromosome_5A	507	1	25	41.02564102564103	1.1935028248587571	0.43370508054522927	25	0	0.43370508054522927	25	0	NA	NA	NA	1.0803193987787694	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011129	Chromosome_5A	198	1	1	41.91919191919192	0.11538461538461539	96.875	1	1	96.875	1	1	NA	NA	NA	93.56204997882253	45	0.9777777777777777	NA	NA	NA	NA	no Swiss-Prot hit
GN011149	Chromosome_5A	3898	4	104	36.58286300667009	0.7974616064034243	0.5477494641581329	104	0	0.5063291139240507	35	0	0.5640345056403451	69	0	0.39819485001327315	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011148	Chromosome_5A	273	1	8	54.21245421245421	0.40784313725490196	9.142857142857142	8	0	9.142857142857142	8	0	NA	NA	NA	1.1267605633802817	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011147	Chromosome_5A	999	1	2	52.652652652652655	0.029089320812404455	8	2	0	8	2	0	NA	NA	NA	0.9620826259196378	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011146	Chromosome_5A	3691	4	145	40.12462747222975	0.9774751245598399	0.790091821481956	145	0	0.68359375	71	0	0.872865275142315	74	0	0.6199854121079504	61	0	unmethylated (<10%)	Q24524	Protein singed	actin cytoskeleton organization [GO:0030036]; actin filament bundle assembly [GO:0051017]; antennal morphogenesis [GO:0048800]; cell migration [GO:0016477]; chaeta morphogenesis [GO:0008407]; cuticle pattern formation [GO:0035017]; dendrite development [GO:0016358]; epidermal cell differentiation [GO:0009913]; establishment or maintenance of cell polarity [GO:0007163]; filopodium assembly [GO:0046847]; hemocyte migration [GO:0035099]; imaginal disc-derived wing hair organization [GO:0035317]; microvillar actin bundle assembly [GO:0030034]; neuron projection morphogenesis [GO:0048812]; wound healing [GO:0042060]	hit with GO BP
GN011145	Chromosome_5A	2317	4	78	41.001294777729825	0.8019115317545892	0.6653620352250489	78	0	0.8019740900678594	65	0	0.4282655246252677	13	0	1.2595119391235896	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011136	Chromosome_5A	19189	14	364	35.06696544895513	0.6198732280071253	71.36034361176999	358	0.8659217877094972	79.09270216962524	18	0.8333333333333334	71.100583090379	340	0.8676470588235294	57.88259420661369	50	0.62	methylated (>=50%)	Q58D56	Developmentally-regulated GTP-binding protein 2 (DRG-2) (Translation factor GTPase DRG2) (TRAFAC GTPase DRG2) (EC 3.6.5.-)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN011135	Chromosome_5A	2704	2	52	38.42455621301775	0.521465657914256	61.78861788617886	51	0.6862745098039216	81.4873417721519	11	1	58.50895679662803	40	0.6	77.06659012629162	35	0.9714285714285714	methylated (>=50%)	P29372	DNA-3-methyladenine glycosylase (EC 3.2.2.21) (3-alkyladenine DNA glycosylase) (3-methyladenine DNA glycosidase) (ADPG) (N-methylpurine-DNA glycosylase)	base-excision repair [GO:0006284]; depurination [GO:0045007]; DNA alkylation repair [GO:0006307]	hit with GO BP
GN016055	Chromosome_5A	2045	3	29	33.691931540342296	0.5029086530307656	44.81185860889396	29	0.3793103448275862	42.573402417962	25	0.28	61.26984126984127	4	1	9.360240446543582	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016056	Chromosome_5A	915	1	24	46.557377049180324	0.48584070796460177	96.23233908948194	24	1	96.23233908948194	24	1	NA	NA	NA	95.6043956043956	52	1	methylated (>=50%)	O49447	ADP/ATP translocase 3, mitochondrial (ADP,ATP carrier protein 3) (Adenine nucleotide translocator 3) (ANT 3)	mitochondrial ADP transmembrane transport [GO:0140021]; mitochondrial ATP transmembrane transport [GO:1990544]; purine nucleotide transport [GO:0015865]; regulation of mitochondrial membrane permeability [GO:0046902]	hit with GO BP
GN011133	Chromosome_5A	2048	4	19	32.8125	0.3572300715157858	83.26967150496563	19	0.8421052631578947	78.69822485207101	9	0.7777777777777778	86.15960099750623	10	0.9	53.278312700596054	33	0.5151515151515151	methylated (>=50%)	Q96AJ9	Vesicle transport through interaction with t-SNAREs homolog 1A (Vesicle transport v-SNARE protein Vti1-like 2) (Vti1-rp2)	autophagy [GO:0006914]; endocytic recycling [GO:0032456]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi to vacuole transport [GO:0006896]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; macroautophagy [GO:0016236]; retrograde transport, endosome to Golgi [GO:0042147]; vesicle fusion with Golgi apparatus [GO:0048280]; voluntary musculoskeletal movement [GO:0050882]	hit with GO BP
GN011154	Chromosome_5A	303	1	8	40.59405940594059	0.73992673992674	7.340553549939831	8	0	7.340553549939831	8	0	NA	NA	NA	0.6272869837950863	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011155	Chromosome_5A	12980	7	266	36.047765793528505	0.6329501915708812	88.51493479175431	266	0.9323308270676691	62.414965986394556	12	0.5833333333333334	89.47106099308455	254	0.9488188976377953	0.5131713992473487	54	0	methylated (>=50%)	P35980	Large ribosomal subunit protein eL18 (60S ribosomal protein L18)	cytoplasmic translation [GO:0002181]; negative regulation of myoblast fusion [GO:1901740]; spermatogenesis [GO:0007283]; striated muscle contraction [GO:0006941]	hit with GO BP
GN011156	Chromosome_5A	513	1	26	43.27485380116959	1.1085438829787233	0.9540329575021682	26	0	0.9540329575021682	26	0	NA	NA	NA	1.0444643390032826	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011157	Chromosome_5A	705	1	29	44.53900709219858	0.8299841675800755	0.29411764705882354	29	0	0.29411764705882354	29	0	NA	NA	NA	0.40261701056869653	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011158	Chromosome_5A	31609	15	538	36.24600588440001	0.5195068448590865	79.16879631995911	517	0.7504835589941973	86.73527730131504	65	0.8307692307692308	78.21693159749694	452	0.7389380530973452	0.7722007722007722	47	0	methylated (>=50%)	Q3B8Q1	Nucleolar RNA helicase 2 (EC 3.6.4.13) (DEAD box protein 21) (Gu-alpha) (Nucleolar RNA helicase Gu) (Nucleolar RNA helicase II) (RH II/Gu)	positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of transcription by RNA polymerase III [GO:0045945]; R-loop processing [GO:0062176]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN011159	Chromosome_5A	4090	5	77	29.95110024449878	0.8403152816615792	4.5080500894454385	76	0	1.5938606847697756	31	0	5.775154004106776	45	0	0.6324666198172875	55	0	unmethylated (<10%)	P14316	Interferon regulatory factor 2 (IRF-2)	cell population proliferation [GO:0008283]; defense response to virus [GO:0051607]; immune system process [GO:0002376]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of type I interferon production [GO:0032480]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; toll-like receptor 3 signaling pathway [GO:0034138]	hit with GO BP
GN011160	Chromosome_5A	231	1	30	59.74025974025974	1.6202945990180033	0	15	0	0	15	0	NA	NA	NA	0.36075036075036077	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011161	Chromosome_5A	8640	7	96	37.58101851851852	0.3160999702741637	86.55960900680748	93	0.989247311827957	87.41845293569432	24	0.9583333333333334	86.36168384879726	69	1	82.06599713055954	32	0.9375	methylated (>=50%)	Q13772	Nuclear receptor coactivator 4 (NCoA-4) (Androgen receptor coactivator 70 kDa protein) (70 kDa AR-activator) (70 kDa androgen receptor coactivator) (Androgen receptor-associated protein of 70 kDa) (Ferritin cargo receptor NCOA4) (Ret-activating protein ELE1)	autophagy [GO:0006914]; cellular response to estrogen stimulus [GO:0071391]; cellular response to testosterone stimulus [GO:0071394]; erythrocyte differentiation [GO:0030218]; estrogen receptor signaling pathway [GO:0030520]; intracellular iron ion homeostasis [GO:0006879]; male gonad development [GO:0008584]; protein targeting to lysosome [GO:0006622]; response to hormone [GO:0009725]	hit with GO BP
GN011162	Chromosome_5A	21780	8	175	35.53719008264463	0.2607598054307001	72.80726924916308	174	0.8505747126436781	88.13427010148321	22	1	70.66710268149117	152	0.8289473684210527	18.564780798432526	48	0.16666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011165	Chromosome_5A	11400	14	183	34.74561403508772	0.5329111324323247	79.67342899554676	172	0.8837209302325582	84.20441347270615	15	0.9333333333333333	79.25140631761143	157	0.8789808917197452	9.381044487427467	37	0.21621621621621623	methylated (>=50%)	Q8WVB3	Hexosaminidase D (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) (Beta-hexosaminidase D) (Hexosaminidase domain-containing protein) (N-acetyl-beta-galactosaminidase)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN011166	Chromosome_5A	159	1	10	51.57232704402516	0.9509569377990431	0	6	0	0	6	0	NA	NA	NA	1.1178247734138973	89	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011167	Chromosome_5A	19293	9	281	34.92458404602706	0.47810812040705747	57.64480153495623	188	0.6914893617021277	87.64591439688716	23	0.9130434782608695	55.674121405750796	165	0.6606060606060606	79.073756432247	27	0.8518518518518519	methylated (>=50%)	Q5ZHN9	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial (EC 2.7.8.5) (Phosphatidylglycerophosphate synthase 1) (PGP synthase 1)	cardiolipin biosynthetic process [GO:0032049]	hit with GO BP
GN001688	Chromosome_5A	856	3	27	39.018691588785046	0.8311277330264673	3.25922182920667	27	0	3.3537474482356373	24	0	2.6465028355387523	3	0	2.8367013932471443	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011168	Chromosome_5A	26119	47	311	38.33607718519086	0.3248647431559717	72.70188503607167	305	0.8524590163934426	71.40360311911805	186	0.8279569892473119	73.6923076923077	119	0.8907563025210085	2.8857556990380813	30	0	methylated (>=50%)	P23098	Dynein beta chain, ciliary	microtubule-based movement [GO:0007018]	hit with GO BP
GN011169	Chromosome_5A	2461	4	24	36.2454286875254	0.2992173054028724	91.60559626915389	24	1	94.56521739130434	3	1	91.1921032649962	21	1	40.38224414303329	27	0.3333333333333333	methylated (>=50%)	Q8NB15	Zinc finger protein 511	NA	hit, no GO BP
GN011171	Chromosome_5A	9841	9	108	33.95996341835179	0.3849061933570302	82.56309406751885	104	0.8846153846153846	84.61538461538461	21	0.9047619047619048	82.1092655593356	83	0.8795180722891566	88.86741399304213	34	0.9705882352941176	methylated (>=50%)	Q1JPX3	Phenylalanine--tRNA ligase alpha subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase alpha subunit) (PheRS)	phenylalanyl-tRNA aminoacylation [GO:0006432]; protein heterotetramerization [GO:0051290]	hit with GO BP
GN011170	Chromosome_5A	3120	2	56	35.86538461538461	0.5612267841885147	90.43374925727866	56	1	93.70277078085643	14	1	89.42457231726283	42	1	74.6606334841629	11	0.7272727272727273	methylated (>=50%)	D6WIX5	Calcium uniporter protein, mitochondrial (TcMCU)	calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]	hit with GO BP
GN011173	Chromosome_5A	6245	3	159	36.06084867894315	0.783965481848758	3.208430913348946	159	0	3.5203520352035205	25	0	3.1712750622461012	134	0	0.8951406649616368	49	0	unmethylated (<10%)	P22031	D-galactoside-specific lectin (Sea urchin egg lectin) (SUEL)	NA	hit, no GO BP
GN011172	Chromosome_5A	21468	20	568	35.648406931246505	0.8334134590083015	1.0284471107888058	563	0	1.1566359537345619	115	0	1.0025360595974004	448	0	1.2826603325415677	38	0	unmethylated (<10%)	Q5YCC5	Transmembrane channel-like protein 7	sensory perception of mechanical stimulus [GO:0050954]	hit with GO BP
GN011174	Chromosome_5A	19141	15	207	34.49140588266026	0.3642814193984951	90.59054781642595	199	0.9899497487437185	90.9251101321586	38	1	90.51002014632594	161	0.9875776397515528	77.35958309206717	39	0.8974358974358975	methylated (>=50%)	E9PT23	Solute carrier family 38 member 10 (Amino acid transporter SLC38A10)	amino acid transmembrane transport [GO:0003333]; bone development [GO:0060348]	hit with GO BP
GN011176	Chromosome_5A	36928	10	381	35.76418977469671	0.32947676780251356	76.77330938991541	379	0.8944591029023746	82.67263427109974	32	0.96875	76.30249527988978	347	0.8876080691642652	80.58823529411765	10	1	methylated (>=50%)	Q5U2V4	Lysosomal leucine aminopeptidase (LyLAP) (EC 3.4.11.-) (LAMA-like protein 1) (Lamina ancestor homolog 1) (Phospholipase B domain-containing protein 1) (Phospholipase B-like 1) [Cleaved into: Lysosomal leucine aminopeptidase chain A; Lysosomal leucine aminopeptidase chain B; Lysosomal leucine aminopeptidase chain C]	lysosomal protein catabolic process [GO:1905146]	hit with GO BP
GN011177	Chromosome_5A	9539	10	309	37.257574169200126	0.9351960784313725	0.7512578399614033	304	0	1.2278308321964528	91	0	0.5901881224640354	213	0	0.9904258831297458	40	0	unmethylated (<10%)	Q02844	Tryptase (EC 3.4.21.59) (Mast cell protease 7) (mMCP-7) (Tryptase alpha/beta-1)	negative regulation of blood coagulation [GO:0030195]; proteolysis [GO:0006508]	hit with GO BP
GN011524	Chromosome_5A	1069	2	11	37.2310570626754	0.3121996548519846	94.57092819614711	11	1	94.53125	8	1	94.6524064171123	3	1	86.84399712437096	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011178	Chromosome_5A	2760	1	296	60.76086956521739	1.233184398019563	1.3392857142857142	15	0	1.3392857142857142	15	0	NA	NA	NA	0.7982969664715274	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011525	Chromosome_5A	1310	2	42	40.61068702290076	0.7784931022285108	0.7604562737642585	42	0	0.4985754985754986	38	0	2.8735632183908044	4	0	1.533433886375063	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011179	Chromosome_5A	916	2	25	38.75545851528384	0.7281399046104928	0.4065040650406504	24	0	0.28382213812677387	19	0	0.6015037593984962	5	0	0.5149330587023687	42	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN002946	Chromosome_5A	369	1	8	51.21951219512195	0.3423005565862709	1.2195121951219512	4	0	1.2195121951219512	4	0	NA	NA	NA	0.7979572294924993	74	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011180	Chromosome_5A	468	1	17	46.15384615384615	0.6892488954344624	0.7434944237918215	17	0	0.7434944237918215	17	0	NA	NA	NA	0.6973795435333897	54	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN011181	Chromosome_5A	441	1	11	41.49659863945578	0.5798469997609371	0.6263048016701461	11	0	0.6263048016701461	11	0	NA	NA	NA	0.20629190304280556	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011182	Chromosome_5A	468	1	15	45.94017094017094	0.6157894736842106	0.6060606060606061	15	0	0.6060606060606061	15	0	NA	NA	NA	0.41002277904328016	46	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN002483	Chromosome_5A	169	1	13	65.68047337278107	0.9238856181665265	NA	0	NA	NA	NA	NA	NA	NA	NA	0.43815301651499833	81	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011184	Chromosome_5A	480	1	15	45.625	0.6084164272435356	0	15	0	0	15	0	NA	NA	NA	10.108716383749762	62	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN011205	Chromosome_5A	504	1	7	38.492063492063494	0.3755988502076014	43.43971631205674	7	0.42857142857142855	43.43971631205674	7	0.42857142857142855	NA	NA	NA	38.8064849948258	17	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011204	Chromosome_5A	45950	3	1238	35.83025027203482	0.8394516123681761	0.5498003356675734	971	0	0.516270337922403	74	0	0.5532172693068044	897	0	1.0592389172224401	60	0	unmethylated (<10%)	P17972	Potassium voltage-gated channel protein Shaw (Shaw2)	action potential [GO:0001508]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]; sleep [GO:0030431]	hit with GO BP
GN011203	Chromosome_5A	5967	5	170	37.35545500251383	0.8167864803756739	1.4612627515853323	167	0	1.3425253991291728	59	0	1.5340151178301467	108	0	1.8987341772151898	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011202	Chromosome_5A	894	3	27	35.57046979865772	0.9566423589093215	0.8347245409015025	27	0	0.49813200498132004	14	0	1.1066398390342052	13	0	0.3143242029636282	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011201	Chromosome_5A	22980	5	558	35.800696257615314	0.7586225991540333	0.5538938739337543	545	0	0.4966403739409874	110	0	0.5621776988756446	435	0	0.7569825110937092	75	0	unmethylated (<10%)	Q9V9S7	Rho GTPase-activating protein 100F (RhoGAP-100F) (Synapse defective protein 1 homolog) (Protein syd-1 homolog)	activation of GTPase activity [GO:0090630]; axon extension involved in axon guidance [GO:0048846]; cell migration [GO:0016477]; cytoskeletal matrix organization at active zone [GO:0048789]; maintenance of presynaptic active zone structure [GO:0048790]; presynaptic active zone organization [GO:1990709]; R7 cell development [GO:0045467]; regulation of Ras protein signal transduction [GO:0046578]; Rho protein signal transduction [GO:0007266]; synapse assembly [GO:0007416]; synaptic vesicle localization [GO:0097479]	hit with GO BP
GN011200	Chromosome_5A	4852	7	55	35.69661995053586	0.3581076094176692	69.18986549890522	55	0.7454545454545455	73.17708333333333	22	0.8636363636363636	66.9437652811736	33	0.6666666666666666	65.67085953878407	35	0.6	methylated (>=50%)	A6QPA3	BTB/POZ domain-containing protein 19	NA	hit, no GO BP
GN011211	Chromosome_5A	312	1	18	49.67948717948718	0.936	0.8620689655172413	18	0	0.8620689655172413	18	0	NA	NA	NA	0.8857808857808858	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011210	Chromosome_5A	16884	12	307	36.685619521440415	0.5433908573757664	85.38385826771653	170	0.9352941176470588	88.04573804573805	47	0.9787234042553191	84.76202039825158	123	0.9186991869918699	NA	NA	NA	methylated (>=50%)	P54319	Phospholipase A-2-activating protein (PLA2P) (PLAP)	cellular response to lipopolysaccharide [GO:0071222]; inflammatory response [GO:0006954]; macroautophagy [GO:0016236]; negative regulation of protein K63-linked ubiquitination [GO:1900045]; positive regulation of dendrite extension [GO:1903861]; positive regulation of neuron migration [GO:2001224]; positive regulation of prostaglandin biosynthetic process [GO:0031394]; positive regulation of synaptic vesicle recycling [GO:1903423]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]	hit with GO BP
GN011209	Chromosome_5A	25158	10	466	35.35654662532793	0.59333722493387	61.198738170347006	19	0.47368421052631576	NA	NA	NA	61.198738170347006	19	0.47368421052631576	34.48275862068966	5	0	methylated (>=50%)	Q9UGU5	HMG domain-containing protein 4 (HMG box-containing protein 4) (High mobility group protein 2-like 1) (Protein HMGBCG)	endosome to lysosome transport [GO:0008333]; negative regulation of Wnt signaling pathway [GO:0030178]	hit with GO BP
GN011208	Chromosome_5A	594	1	31	49.32659932659933	0.8587818300531667	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011199	Chromosome_5A	19130	6	191	33.8421327757449	0.348927308967257	84.222042139384115	191	0.9633507853403142	85.65737051792829	28	0.9642857142857143	84.05953991880921	163	0.9631901840490797	75.54101660795169	28	0.9285714285714286	methylated (>=50%)	Q96GM8	Target of EGR1 protein 1	snRNA 3'-end processing [GO:0034472]	hit with GO BP
GN011198	Chromosome_5A	12320	9	189	33.87987012987013	0.5373004143144429	80.03203788828527	180	0.9333333333333333	60.519902518277824	17	0.6470588235294118	81.86181153348062	163	0.9631901840490797	76.37397346809854	49	0.7551020408163265	methylated (>=50%)	Q9H9Y2	Ribosome production factor 1 (Brix domain-containing protein 5) (Ribosome biogenesis protein RPF1)	maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]	hit with GO BP
GN011197	Chromosome_5A	6724	4	214	38.325401546698394	0.8667652136409252	0.6098800569221386	212	0	1.36986301369863	18	0	0.5554950441128418	194	0	0.5747126436781609	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011196	Chromosome_5A	813	1	25	50.92250922509225	0.5244755244755245	0.7874015748031497	15	0	0.7874015748031497	15	0	NA	NA	NA	0.6865912762520194	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011206	Chromosome_5A	798	1	11	43.48370927318296	0.3248464214343868	81.46417445482867	11	0.9090909090909091	81.46417445482867	11	0.9090909090909091	NA	NA	NA	75.76158940397352	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011223	Chromosome_5A	53478	17	705	35.079845917947566	0.4307648887195931	65.76981440410879	665	0.8300751879699249	75.61274509803921	35	0.8857142857142857	65.44705645971469	630	0.8269841269841269	65.89975349219392	22	0.7727272727272727	methylated (>=50%)	Q15262	Receptor-type tyrosine-protein phosphatase kappa (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) (EC 3.1.3.48)	cell adhesion [GO:0007155]; cell migration [GO:0016477]; cellular response to reactive oxygen species [GO:0034614]; cellular response to UV [GO:0034644]; focal adhesion assembly [GO:0048041]; negative regulation of cell cycle [GO:0045786]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of keratinocyte proliferation [GO:0010839]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; protein localization to cell surface [GO:0034394]; signal transduction [GO:0007165]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN003578	Chromosome_5A	357	1	11	46.49859943977591	0.5701219512195121	69.6	11	1	69.6	11	1	NA	NA	NA	67.17248356095094	55	0.9636363636363636	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011222	Chromosome_5A	858	1	35	42.89044289044289	0.8870181657066903	0.5529953917050692	35	0	0.5529953917050692	35	0	NA	NA	NA	0.435052827843381	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011221	Chromosome_5A	1934	3	65	39.65873836608066	0.8563351498637602	1.479076479076479	65	0	1.2493492972410203	52	0	1.9976498237367804	13	0	1.9477828429341069	31	0	unmethylated (<10%)	O89091	Krueppel-like factor 10 (GDNF-inducible factor) (Transcription factor GIF) (mGIF) (Transforming growth factor-beta-inducible early growth response protein 1) (TGFB-inducible early growth response protein 1) (TIEG-1)	bone mineralization [GO:0030282]; cellular response to starvation [GO:0009267]; circadian rhythm [GO:0007623]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of osteoclast differentiation [GO:0045672]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; somatic stem cell population maintenance [GO:0035019]	hit with GO BP
GN011220	Chromosome_5A	387	1	5	44.70284237726098	0.5411073825503355	0	5	0	0	5	0	NA	NA	NA	0.4025764895330113	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011219	Chromosome_5A	1461	3	30	41.54688569472964	0.47593710637188896	78.06364251861882	30	1	80.8242220353238	25	1	66.66666666666667	5	1	2.309711286089239	39	0	methylated (>=50%)	O14901	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2)	cellular response to endothelin [GO:1990859]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011218	Chromosome_5A	7841	10	288	38.31143986736386	1.0011371480327338	0.5665961945031712	288	0	0.389321468298109	53	0	0.5983843622220006	235	0	8.700930797248077	44	0.022727272727272728	unmethylated (<10%)	Q9NXG6	Transmembrane prolyl 4-hydroxylase (P4H-TM) (EC 1.14.11.29) (Hypoxia-inducible factor prolyl hydroxylase 4) (HIF-PH4) (HIF-prolyl hydroxylase 4) (HPH-4)	regulation of erythrocyte differentiation [GO:0045646]	hit with GO BP
GN011217	Chromosome_5A	15278	13	229	34.88676528341406	0.49314047079942985	40.895016219404305	228	0.4298245614035088	22.70058708414873	31	0.22580645161290322	43.2133654725293	197	0.4619289340101523	0.6286484059272563	60	0	sparse (10-50%)	Q3MI03	Prolyl 3-hydroxylase OGFOD1 (EC 1.14.11.-) (2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1) (uS12 prolyl 3-hydroxylase)	cell population proliferation [GO:0008283]; protein hydroxylation [GO:0018126]; regulation of translational termination [GO:0006449]; stress granule assembly [GO:0034063]	hit with GO BP
GN011216	Chromosome_5A	6888	3	195	35.43844367015099	0.9036852239836266	1.2225739548084271	179	0	0.32858707557502737	22	0	1.3215324927255092	157	0	0.430239704978488	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011215	Chromosome_5A	17367	16	468	37.237289111533364	0.7775256950875126	3.415451059891587	468	0	5.578859060402684	118	0	2.839926351615243	350	0	0.5859701992298677	111	0	unmethylated (<10%)	P13508	Protein glp-1 [Cleaved into: glp-1/Notch intracellular domain]	cell fate specification [GO:0001708]; cellularization [GO:0007349]; cytoplasmic streaming [GO:0099636]; embryonic pattern specification [GO:0009880]; maintenance of dauer [GO:0043055]; negative regulation of stem cell differentiation [GO:2000737]; nematode larval development [GO:0002119]; nematode pharyngeal muscle development [GO:0160096]; Notch signaling pathway [GO:0007219]; oocyte growth [GO:0001555]; positive regulation of gene expression [GO:0010628]; positive regulation of germ cell proliferation [GO:1905938]; positive regulation of stem cell proliferation [GO:2000648]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of gene expression [GO:0010468]; regulation of germ cell proliferation [GO:1905936]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011214	Chromosome_5A	15415	15	247	37.65812520272462	0.4524664289958408	85.79703429101019	204	0.9313725490196079	90.89529590288316	33	1	84.87831555920152	171	0.9181286549707602	48.408071748878925	59	0.4915254237288136	methylated (>=50%)	Q99LH1	Nucleolar GTP-binding protein 2	NA	hit, no GO BP
GN011213	Chromosome_5A	6486	5	118	34.61301264261486	0.6081314301515108	88.52047556142668	118	0.9745762711864406	96.95014662756599	29	1	86.06990622335891	89	0.9662921348314607	7.466168922071862	40	0.05	methylated (>=50%)	B5X4E0	Calumenin-B	NA	hit, no GO BP
GN011212	Chromosome_5A	708	2	4	38.84180790960452	0.14979371628054586	21.518987341772153	4	0.25	30.693069306930692	3	0.3333333333333333	5.2631578947368425	1	0	19.937694704049843	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011186	Chromosome_5A	391	1	15	40.40920716112532	0.9399038461538461	0.7563479200432199	14	0	0.7563479200432199	14	0	NA	NA	NA	1.4342629482071714	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011256	Chromosome_5A	372	1	18	45.16129032258065	0.9501915708812261	0.5181347150259067	18	0	0.5181347150259067	18	0	NA	NA	NA	0.3395061728395062	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011255	Chromosome_5A	387	1	6	41.60206718346253	0.3584439641864773	0.7722007722007722	6	0	0.7722007722007722	6	0	NA	NA	NA	0.5703422053231939	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011254	Chromosome_5A	653	2	20	34.45635528330781	1.0320847162952427	0.5257623554153522	20	0	0.49019607843137253	17	0	0.7407407407407407	3	0	0.3514376996805112	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011253	Chromosome_5A	279	2	11	39.06810035842294	1.0590062111801242	1.0706638115631693	11	0	0.9478672985781991	10	0	2.2222222222222223	1	0	1.7850502045370027	58	0	unmethylated (<10%)	P55202	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN011252	Chromosome_5A	5995	6	188	36.330275229357795	0.9509955389123789	0.5831202046035806	187	0	0.6398537477148081	100	0	0.5371365067605112	87	0	0.7142857142857143	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011251	Chromosome_5A	1630	3	89	39.57055214723926	1.3965958757725707	0.6772009029345373	37	0	1.1075949367088607	20	0	0.43859649122807015	17	0	0.48999591670069415	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011250	Chromosome_5A	2148	1	31	43.0633147113594	0.3129370629370629	95.2895752895753	31	1	95.2895752895753	31	1	NA	NA	NA	90.66111881645863	26	1	methylated (>=50%)	Q80Z37	E3 ubiquitin-protein ligase Topors (EC 2.3.2.27) (RING-type E3 ubiquitin transferase Topors) (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-binding protein 3) (p53BP3)	DNA damage response [GO:0006974]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; maintenance of protein location in nucleus [GO:0051457]; positive regulation of DNA-templated transcription [GO:0045893]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein localization to nucleus [GO:0034504]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein sumoylation [GO:0016925]; regulation of cell population proliferation [GO:0042127]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN011249	Chromosome_5A	1888	4	55	36.54661016949152	0.8726857104438226	0.644122383252818	41	0	0.6511627906976745	29	0	0.6345177664974619	12	0	0.4048582995951417	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011248	Chromosome_5A	1381	2	41	37.72628530050688	0.8357343173431734	0.45662100456621	41	0	0.47716428084526247	40	0	0	1	0	0.27137042062415195	48	0	unmethylated (<10%)	Q95KZ0	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011247	Chromosome_5A	1747	3	51	39.15283342873497	0.7617537169874233	0	14	0	0	7	0	0	7	0	0.9280742459396751	23	0	unmethylated (<10%)	P32240	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of peptide secretion [GO:0002792]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of substance P secretion, neurotransmission [GO:1904496]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to lipopolysaccharide [GO:0032496]; response to nematode [GO:0009624]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN011246	Chromosome_5A	282	1	6	41.13475177304964	0.5444015444015444	0	1	0	0	1	0	NA	NA	NA	0	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011245	Chromosome_5A	810	1	32	42.22222222222222	0.8879144971224994	1.4336917562724014	19	0	1.4336917562724014	19	0	NA	NA	NA	0.6885998469778117	33	0	unmethylated (<10%)	Q28691	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011244	Chromosome_5A	1851	4	52	36.2506753106429	0.8553452412689949	1.048951048951049	20	0	1.1214953271028036	19	0	0	1	0	0.3460207612456747	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011243	Chromosome_5A	1381	2	42	37.72628530050688	0.8563961729270021	0.1996007984031936	17	0	0.1996007984031936	17	0	NA	NA	NA	0.5592105263157895	47	0	unmethylated (<10%)	Q95KZ0	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011232	Chromosome_5A	1747	2	52	39.267315397824845	0.7721612593392209	0	22	0	0	11	0	0	11	0	0.8695652173913043	36	0	unmethylated (<10%)	P32240	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of peptide secretion [GO:0002792]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of substance P secretion, neurotransmission [GO:1904496]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to lipopolysaccharide [GO:0032496]; response to nematode [GO:0009624]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN011231	Chromosome_5A	282	1	6	40.42553191489362	0.5595238095238095	1	6	0	1	6	0	NA	NA	NA	0.3286770747740345	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011230	Chromosome_5A	810	1	32	42.34567901234568	0.8825331971399387	1.5923566878980893	16	0	1.5923566878980893	16	0	NA	NA	NA	0.4122497055359246	49	0	unmethylated (<10%)	Q28691	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011229	Chromosome_5A	609	1	23	39.73727422003284	0.9620192307692308	0.7142857142857143	8	0	0.7142857142857143	8	0	NA	NA	NA	0.635593220338983	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011228	Chromosome_5A	1327	2	43	38.20648078372268	0.8897707781069703	0	17	0	0	17	0	NA	NA	NA	0.14814814814814814	24	0	unmethylated (<10%)	Q95KZ0	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011242	Chromosome_5A	1747	2	52	39.15283342873497	0.776683423959509	0.5399568034557235	37	0	0.48661800486618007	20	0	0.5825242718446602	17	0	0.5305039787798409	45	0	unmethylated (<10%)	P32240	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of peptide secretion [GO:0002792]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of substance P secretion, neurotransmission [GO:1904496]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to lipopolysaccharide [GO:0032496]; response to nematode [GO:0009624]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN011227	Chromosome_5A	2367	2	77	40.38867765103507	0.799087178407955	0.4497751124437781	62	0	0.31974420463629094	27	0	0.5645730416372619	35	0	1.3500784929356358	67	0	unmethylated (<10%)	P43114	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to glucose stimulus [GO:0071333]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; female pregnancy [GO:0007565]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to amino acid [GO:0043200]; response to interleukin-1 [GO:0070555]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to nematode [GO:0009624]; response to progesterone [GO:0032570]; response to prostaglandin E [GO:0034695]; response to salt [GO:1902074]; response to water-immersion restraint stress [GO:1990785]; response to xenobiotic stimulus [GO:0009410]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN011226	Chromosome_5A	3161	2	83	35.87472318886428	0.816821295143213	0.5199306759098787	81	0	0.6551518761167362	44	0	0.44262853251617296	37	0	0.7003317360855142	54	0	unmethylated (<10%)	Q28691	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; immune response [GO:0006955]; inflammatory response [GO:0006954]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; response to mechanical stimulus [GO:0009612]	hit with GO BP
GN011225	Chromosome_5A	1611	2	41	37.864680322780885	0.7115341111075203	0.7027027027027027	41	0	1.0116731517509727	33	0	0	8	0	0.32710280373831774	52	0	unmethylated (<10%)	P32240	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of peptide secretion [GO:0002792]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of substance P secretion, neurotransmission [GO:1904496]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to lipopolysaccharide [GO:0032496]; response to nematode [GO:0009624]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN011224	Chromosome_5A	831	1	30	41.75691937424789	0.8282392026578073	0.7150153217568948	30	0	0.7150153217568948	30	0	NA	NA	NA	1.053911633563032	62	0	unmethylated (<10%)	Q8MJ08	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN011272	Chromosome_5A	20397	10	343	34.42663136735794	0.5679676048808624	80.83572675564567	310	0.8709677419354839	77.3283160865475	17	0.7647058823529411	81.05906313645622	293	0.8771331058020477	26.136363636363637	25	0.12	methylated (>=50%)	Q7TNV0	Protein DEK	chromatin remodeling [GO:0006338]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription by RNA polymerase III [GO:0045945]; regulation of double-strand break repair [GO:2000779]; regulation of double-strand break repair via nonhomologous end joining [GO:2001032]	hit with GO BP
GN011290	Chromosome_5A	667	2	8	35.68215892053973	0.41249226963512675	88.77721943048576	8	1	88.7189292543021	7	1	89.1891891891892	1	1	88.96103896103897	15	1	methylated (>=50%)	Q7T312	Coiled-coil domain-containing protein 25	positive regulation of cell motility [GO:2000147]	hit with GO BP
GN011289	Chromosome_5A	13765	15	145	33.67962223029422	0.37397714531544174	85.27676027676027	144	0.9166666666666666	88.13559322033899	26	0.9230769230769231	84.81879353087002	118	0.9152542372881356	7.938991005084083	45	0	methylated (>=50%)	B2GV50	DNA-binding protein RFX2 (Regulatory factor X 2)	acrosome assembly [GO:0001675]; cellular response to leukemia inhibitory factor [GO:1990830]; cilium assembly [GO:0060271]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; spermatid development [GO:0007286]	hit with GO BP
GN011288	Chromosome_5A	1997	5	24	31.14672008012018	0.5115266393442623	24.2603550295858	8	0.25	0	2	0	38.3177570093458	6	0.3333333333333333	0.4426737494466578	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011287	Chromosome_5A	58264	28	624	34.563366744473434	0.35888109071741203	72.52273439949828	583	0.8576329331046312	78.79199185612487	54	0.8518518518518519	71.99966025876957	529	0.8582230623818525	51.0958904109589	11	0.5454545454545454	methylated (>=50%)	A4D2P6	Delphilin (Glutamate receptor, ionotropic, delta 2-interacting protein 1)	regulation of postsynaptic cytosolic calcium ion concentration [GO:0099566]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]	hit with GO BP
GN011286	Chromosome_5A	1713	1	40	42.61529480443666	0.5171476874773578	83.38783518639634	40	1	83.38783518639634	40	1	NA	NA	NA	41.46666666666667	12	0.08333333333333333	methylated (>=50%)	Q6NYM1	Kelch-like protein 21	chromosome passenger complex localization to spindle midzone [GO:0035853]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of cytokinesis [GO:0032465]	hit with GO BP
GN011285	Chromosome_5A	12984	17	150	33.50277264325324	0.4146680409447431	81.38221400698295	150	0.9333333333333333	82.2207534699273	22	0.9545454545454546	81.22796352583586	128	0.9296875	55.6310425921087	52	0.46153846153846156	methylated (>=50%)	A0A1L8G016	Dynein axonemal assembly factor 11 (DNAAF11) (Leucine-rich repeat-containing protein 6) (Protein tilB homolog)	axonemal dynein complex assembly [GO:0070286]; cerebrospinal fluid circulation [GO:0090660]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; flagellated sperm motility [GO:0030317]; outer dynein arm assembly [GO:0036158]; protein localization to cilium [GO:0061512]; protein localization to motile cilium [GO:0120229]	hit with GO BP
GN011284	Chromosome_5A	6198	3	95	36.479509519199745	0.4609895762381447	91.48862853204686	88	0.9772727272727273	92.91497975708502	7	1	91.35593220338983	81	0.9753086419753086	94.577146546158815	69	1	methylated (>=50%)	Q68EP9	Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C)	aggrephagy [GO:0035973]; autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; mitophagy [GO:0000423]; piecemeal microautophagy of the nucleus [GO:0034727]; protein delipidation [GO:0051697]; protein processing [GO:0016485]	hit with GO BP
GN011283	Chromosome_5A	10791	8	192	35.14966175516634	0.5773608187437613	85.91873053537002	192	0.8854166666666666	54.90318550905684	41	0.5365853658536586	90.09676062263357	151	0.9801324503311258	8.381799521040028	46	0	methylated (>=50%)	Q684M2	Cysteine protease ATG4D (EC 3.4.22.-) (Autophagy-related protein 4 homolog D) (Autophagin-4) [Cleaved into: Cysteine protease ATG4D, mitochondrial]	aggrephagy [GO:0035973]; autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; mitophagy [GO:0000423]; piecemeal microautophagy of the nucleus [GO:0034727]; protein delipidation [GO:0051697]; protein localization to phagophore assembly site [GO:0034497]; protein processing [GO:0016485]	hit with GO BP
GN011282	Chromosome_5A	4416	6	41	34.19384057971015	0.31971520596711306	89.36446173800259	41	1	90.48556430446195	30	1	87.19898605830164	11	1	90.24199843871975	20	0.95	methylated (>=50%)	P61590	Microcephalin	cerebral cortex development [GO:0021987]; mitotic cell cycle [GO:0000278]; regulation of gene expression [GO:0010468]	hit with GO BP
GN011281	Chromosome_5A	5797	6	78	34.74210798688977	0.44622231871471996	87.62527233115469	74	0.9594594594594594	94.23368740515933	12	1	86.51742559145255	62	0.9516129032258065	19.664703217036703	36	0.1111111111111111	methylated (>=50%)	P61593	Microcephalin	cerebral cortex development [GO:0021987]; mitotic cell cycle [GO:0000278]; regulation of gene expression [GO:0010468]	hit with GO BP
GN011280	Chromosome_5A	869	3	32	42.692750287687	0.8191351478732178	1.120162932790224	32	0	0.8092485549132948	28	0	3.4188034188034186	4	0	0.6564551422319475	61	0	unmethylated (<10%)	P07560	Ras-related protein SEC4 (Suppressor of RHO3 protein 6)	ascospore-type prospore assembly [GO:0031321]; autophagy [GO:0006914]; exocytosis [GO:0006887]; Golgi to plasma membrane transport [GO:0006893]; membrane addition at site of cytokinesis [GO:0007107]; vesicle fusion [GO:0006906]	hit with GO BP
GN011279	Chromosome_5A	11546	7	150	34.73930365494544	0.4316874920549461	79.17116763232839	149	0.912751677852349	78.10650887573965	14	0.9285714285714286	79.26750910259156	135	0.9111111111111111	73.71601208459215	10	1	methylated (>=50%)	E9QBI7	Metalloendopeptidase OMA1, mitochondrial (zfoma1) (EC 3.4.24.-) (Overlapping with the m-AAA protease 1 homolog)	diet induced thermogenesis [GO:0002024]; energy homeostasis [GO:0097009]; glucose metabolic process [GO:0006006]; HRI-mediated signaling [GO:0140468]; integrated stress response signaling [GO:0140467]; lipid metabolic process [GO:0006629]; mitochondrial protein processing [GO:0034982]; mitochondrial respiratory chain complex assembly [GO:0033108]; negative regulation of mitochondrial fusion [GO:0010637]; positive regulation of apoptotic process [GO:0043065]; protein autoprocessing [GO:0016540]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; regulation of cristae formation [GO:1903850]; zymogen activation [GO:0031638]	hit with GO BP
GN011278	Chromosome_5A	24006	18	405	34.50803965675248	0.5668779391790546	86.95042599849013	379	0.9656992084432717	86.78242381289866	45	0.9777777777777777	86.96939387877576	334	0.9640718562874252	74.75209763539283	22	0.7727272727272727	methylated (>=50%)	G3GTP0	DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4)	base-excision repair [GO:0006284]; cellular response to ionizing radiation [GO:0071479]; DNA biosynthetic process [GO:0071897]; double-strand break repair via classical nonhomologous end joining [GO:0097680]; immunoglobulin V(D)J recombination [GO:0033152]; nucleotide-excision repair, DNA gap filling [GO:0006297]; positive regulation of chromosome organization [GO:2001252]; response to X-ray [GO:0010165]; single strand break repair [GO:0000012]	hit with GO BP
GN011277	Chromosome_5A	3183	5	33	33.741753063147975	0.36470861920502207	75.84566596194503	33	0.8787878787878788	83.06772908366534	11	0.9090909090909091	73.23741007194245	22	0.8636363636363636	48.802530501581565	40	0.55	methylated (>=50%)	O60683	Peroxisome biogenesis factor 10 (EC 2.3.2.27) (Peroxin-10) (Peroxisomal biogenesis factor 10) (Peroxisome assembly protein 10) (RING finger protein 69)	cellular response to reactive oxygen species [GO:0034614]; peroxisome organization [GO:0007031]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein import into peroxisome matrix [GO:0016558]; protein import into peroxisome matrix, receptor recycling [GO:0016562]; protein import into peroxisome matrix, substrate release [GO:0044721]; protein polyubiquitination [GO:0000209]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]	hit with GO BP
GN011276	Chromosome_5A	3041	3	46	37.257481091746136	0.4433506592292089	68.87821911828895	46	0.8043478260869565	50.370370370370374	6	0.5	71.35081642751113	40	0.85	48.04711717296962	27	0.5185185185185185	methylated (>=50%)	O43324	Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18)	negative regulation of cell population proliferation [GO:0008285]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cellular senescence [GO:2000774]; positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]; tRNA aminoacylation for protein translation [GO:0006418]	hit with GO BP
GN011295	Chromosome_5A	675	2	21	39.851851851851855	0.785405585106383	0.6795016987542469	21	0	0.8771929824561403	17	0	0	4	0	1.9920318725099602	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011294	Chromosome_5A	5745	5	153	35.474325500435164	0.8480932050075982	0.5843263061411549	152	0	0.7115135834411385	26	0	0.556947925368978	126	0	0.40575433419402435	57	0	unmethylated (<10%)	Q91XQ5	Carbohydrate sulfotransferase 15 (EC 2.8.2.33) (B-cell RAG-associated gene protein) (N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase) (GalNAc4S-6ST)	hexose biosynthetic process [GO:0019319]	hit with GO BP
GN016172	Chromosome_5A	682	2	6	35.63049853372434	0.28177936923288804	0	6	0	0	6	0	NA	NA	NA	1.0454783063251438	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011293	Chromosome_5A	3768	1	52	42.54246284501062	0.3073158796183019	90.47413793103448	52	1	90.47413793103448	52	1	NA	NA	NA	44.73953013278856	13	0.46153846153846156	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011292	Chromosome_5A	67021	7	910	34.42652303009505	0.4589087458794299	74.50708661417323	907	0.8776185226019846	76.80412371134021	8	1	74.49296488781849	899	0.8765294771968855	45.63106796116505	13	0.3076923076923077	methylated (>=50%)	Q2T9W9	Caspase activity and apoptosis inhibitor 1 (Conserved anti-apoptotic protein) (CAAP)	negative regulation of apoptotic process [GO:0043066]	hit with GO BP
GN011296	Chromosome_5A	10362	6	94	32.918355529820495	0.3356113360323887	70.42590524804594	93	0.8064516129032258	80.76923076923077	36	1	65.8457997698504	57	0.6842105263157895	0.5837711617046117	51	0	methylated (>=50%)	Q7SZT7	ELAV-like protein 4 (Protein ElrD)	3'-UTR-mediated mRNA stabilization [GO:0070935]; intracellular mRNA localization [GO:0008298]	hit with GO BP
GN011297	Chromosome_5A	1577	4	42	37.09575142675967	0.775355871886121	0.9536194191590811	42	0	1.1724137931034482	28	0	0.5834305717619603	14	0	1.2552301255230125	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011298	Chromosome_5A	270	1	14	41.851851851851855	1.255813953488372	0.391644908616188	14	0	0.391644908616188	14	0	NA	NA	NA	0.6727664155005382	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011300	Chromosome_5A	393	1	17	44.529262086513995	0.8830293417922284	0.4552352048558422	17	0	0.4552352048558422	17	0	NA	NA	NA	0.9928514694201748	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011301	Chromosome_5A	20280	9	561	36.849112426035504	0.8149257066889767	0.6712703985185756	524	0	0.4108463434675431	69	0	0.6982586111465917	455	0	0.9459871833994508	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011302	Chromosome_5A	13638	7	298	36.823581170259565	0.648942745803118	87.80564757848241	296	0.9256756756756757	76.40400522420549	47	0.8085106382978723	89.372009569378	249	0.9477911646586346	1.5927679724494188	74	0	methylated (>=50%)	Q8NC51	SERPINE1 mRNA-binding protein 1 (PAI1 RNA-binding protein 1) (PAI-RBP1) (Plasminogen activator inhibitor 1 RNA-binding protein)	negative regulation of translation [GO:0017148]; PML body organization [GO:0030578]; regulation of mRNA stability [GO:0043488]; ribosome hibernation [GO:0141014]	hit with GO BP
GN011303	Chromosome_5A	8605	4	188	36.8390470656595	0.6454704472257068	46.561289647231234	186	0.44623655913978494	71.39291063404893	49	0.5918367346938775	39.973509933774835	137	0.39416058394160586	27.899239543726235	52	0.2692307692307692	sparse (10-50%)	Q5U2Z0	Zinc finger protein 367	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011304	Chromosome_5A	8135	9	101	35.24277811923786	0.40008287634479284	90.43427230046949	101	0.9801980198019802	92.61083743842364	19	1	89.96070025008932	82	0.975609756097561	93.29226557152636	18	1	methylated (>=50%)	Q90511	Translation initiation factor eIF2B subunit beta (S20I15) (eIF2B GDP-GTP exchange factor subunit beta)	animal organ development [GO:0048513]; central nervous system development [GO:0007417]; cytoplasmic translational initiation [GO:0002183]; myelination [GO:0042552]; oligodendrocyte development [GO:0014003]; T cell receptor signaling pathway [GO:0050852]; translational initiation [GO:0006413]	hit with GO BP
GN011305	Chromosome_5A	10064	3	128	34.09181240063593	0.4380586285367622	74.07407407407408	111	0.8288288288288288	57.64331210191083	6	0.5	74.84342379958247	105	0.8476190476190476	0.2956636005256242	61	0	methylated (>=50%)	Q90511	Translation initiation factor eIF2B subunit beta (S20I15) (eIF2B GDP-GTP exchange factor subunit beta)	animal organ development [GO:0048513]; central nervous system development [GO:0007417]; cytoplasmic translational initiation [GO:0002183]; myelination [GO:0042552]; oligodendrocyte development [GO:0014003]; T cell receptor signaling pathway [GO:0050852]; translational initiation [GO:0006413]	hit with GO BP
GN011306	Chromosome_5A	21774	21	310	36.258840819325805	0.4332529123198711	93.83859113253472	310	1	96.47822057460611	79	1	93.3562881011515	231	1	77.46478873239437	19	0.8421052631578947	methylated (>=50%)	Q8TEK3	Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.360) (DOT1-like protein) (Disruptor of telomeric silencing 1-like histone lysine methyltransferase) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (Lysine N-methyltransferase 4)	DNA damage checkpoint signaling [GO:0000077]; DNA repair [GO:0006281]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of receptor signaling pathway via JAK-STAT [GO:0046425]; regulation of transcription regulatory region DNA binding [GO:2000677]; subtelomeric heterochromatin formation [GO:0031509]; telomere organization [GO:0032200]	hit with GO BP
GN011307	Chromosome_5A	192	1	4	48.4375	0.3572093023255814	0	1	0	0	1	0	NA	NA	NA	3.2051282051282053	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011308	Chromosome_5A	2567	2	20	33.61901051811453	0.27609275511960074	39.599483204134366	20	0.45	20.03058103975535	9	0.3333333333333333	53.914988814317674	11	0.5454545454545454	0.3536693191865606	46	0	sparse (10-50%)	O95816	BAG family molecular chaperone regulator 2 (BAG-2) (Bcl-2-associated athanogene 2)	negative regulation of protein ubiquitination [GO:0031397]; positive regulation of proteasomal protein catabolic process [GO:1901800]; positive regulation of protein processing [GO:0010954]; protein folding [GO:0006457]; protein metabolic process [GO:0019538]; protein stabilization [GO:0050821]	hit with GO BP
GN011309	Chromosome_5A	947	3	43	46.04012671594509	0.8586580634278003	0.46104195481788846	43	0	0.5662514156285391	36	0	0	7	0	1.086092715231788	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011310	Chromosome_5A	13354	7	163	35.36768009585143	0.3915361217687552	76.29828326180258	153	0.8431372549019608	84.05668733392383	16	0.8125	75.22890977902576	137	0.8467153284671532	29.768270944741534	18	0.05555555555555555	methylated (>=50%)	P35288	Ras-related protein Rab-23 (EC 3.6.5.2) (Protein open brain) (Rab-15)	autophagosome assembly [GO:0000045]; cellular defense response [GO:0006968]; cilium assembly [GO:0060271]; craniofacial suture morphogenesis [GO:0097094]; dorsal/ventral neural tube patterning [GO:0021904]; embryonic digit morphogenesis [GO:0042733]; GTP metabolic process [GO:0046039]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of proteolysis [GO:0045861]; negative regulation of smoothened signaling pathway [GO:0045879]; nervous system development [GO:0007399]; neural tube closure [GO:0001843]; regulation of protein localization [GO:0032880]; regulation of smoothened signaling pathway [GO:0008589]; signal transduction [GO:0007165]; spinal cord dorsal/ventral patterning [GO:0021513]	hit with GO BP
GN011311	Chromosome_5A	12378	18	92	34.31895298109549	0.2547502140300351	73.41476558289922	92	0.8369565217391305	74.43609022556392	18	0.8333333333333334	73.13501144164759	74	0.8378378378378378	0.4643064422518862	45	0	methylated (>=50%)	Q0IIF7	Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.4.19.12) (Deubiquitinating enzyme 14) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14)	negative regulation of ERAD pathway [GO:1904293]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]	hit with GO BP
GN011312	Chromosome_5A	6603	2	10	43.64682719975769	0.03846823821527882	24.242424242424242	2	0	24.242424242424242	2	0	NA	NA	NA	59.93589743589744	22	0.6818181818181818	NA	NA	NA	NA	no Swiss-Prot hit
GN011313	Chromosome_5A	1644	1	47	40.693430656934304	0.6956192945497758	0.5736981465136805	47	0	0.5736981465136805	47	0	NA	NA	NA	3.036556603773585	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011314	Chromosome_5A	1751	2	60	38.89206167904055	0.9071912130422769	0.5142405063291139	60	0	0.6072874493927125	36	0	0.3824091778202677	24	0	0.4211208292840946	49	0	unmethylated (<10%)	Q9Y5X5	Neuropeptide FF receptor 2 (G protein-coupled receptor 74) (G protein-coupled receptor HLWAR77) (Neuropeptide G protein-coupled receptor)	cellular response to hormone stimulus [GO:0032870]; detection of abiotic stimulus [GO:0009582]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]; regulation of MAPK cascade [GO:0043408]	hit with GO BP
GN011315	Chromosome_5A	219	1	8	42.009132420091326	0.8315140009492169	0.7246376811594203	8	0	0.7246376811594203	8	0	NA	NA	NA	0.896414342629482	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011316	Chromosome_5A	1071	1	51	42.296918767507	1.0734837467080696	1.0101010101010102	51	0	1.0101010101010102	51	0	NA	NA	NA	0.6229036895064686	36	0	unmethylated (<10%)	Q90ZY4	Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (Brain-specific protein kinase BSK146) (SH3 domain-binding kinase 1)	NA	hit, no GO BP
GN011317	Chromosome_5A	840	1	17	39.166666666666664	0.5387052965142598	0.5	17	0	0.5	17	0	NA	NA	NA	5.586987270155587	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011318	Chromosome_5A	429	2	5	39.62703962703963	0.38133333333333336	13.622291021671826	5	0	13.622291021671826	5	0	NA	NA	NA	0.41050903119868637	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011319	Chromosome_5A	3673	5	95	38.46991560032671	0.7261763542902333	86.19614512471655	95	1	86.33975481611209	10	1	86.16841393304024	85	1	86.32958801498127	28	1	methylated (>=50%)	Q6AYB3	Pre-mRNA-splicing factor ISY1 homolog	generation of catalytic spliceosome for second transesterification step [GO:0000350]; mRNA 3'-splice site recognition [GO:0000389]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN011320	Chromosome_5A	492	1	13	51.21951219512195	0.4455590386624869	0.6535947712418301	8	0	0.6535947712418301	8	0	NA	NA	NA	0.1834862385321101	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011321	Chromosome_5A	28215	7	416	33.93584972532341	0.5145385331822171	69.93912455309692	386	0.8160621761658031	48.833333333333336	12	0.5833333333333334	70.35504318980523	374	0.8235294117647058	92.54736842105264	34	1	methylated (>=50%)	Q8QGW7	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)	cytokine production [GO:0001816]; regulation of cytokine production [GO:0001817]; sexual reproduction [GO:0019953]	hit with GO BP
GN011329	Chromosome_5A	471	1	8	55.20169851380042	0.2489429175475687	0	8	0	0	8	0	NA	NA	NA	0.8352315869400152	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011328	Chromosome_5A	3005	2	103	38.60232945091514	0.9266943913005727	0.6022645145748012	103	0	0.7582139848357203	46	0	0.5398110661268556	57	0	26.213358962037482	56	0.125	unmethylated (<10%)	P27080	ADP/ATP translocase (ADP,ATP carrier protein) (Adenine nucleotide translocator) (ANT)	mitochondrial ADP transmembrane transport [GO:0140021]; mitochondrial ATP transmembrane transport [GO:1990544]	hit with GO BP
GN011327	Chromosome_5A	6207	3	138	35.363299500563876	0.7116144136300422	1.7166762839007501	138	0	0.7707129094412332	17	0	1.7932324964915016	121	0	0.5159958720330238	39	0	unmethylated (<10%)	Q8QGW7	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LPS-induced TNF-alpha factor homolog) (Small integral membrane protein of lysosome/late endosome)	cytokine production [GO:0001816]; regulation of cytokine production [GO:0001817]; sexual reproduction [GO:0019953]	hit with GO BP
GN011326	Chromosome_5A	45641	12	1232	34.72316557481212	0.8955509856685626	4.168119986048134	1226	0	5.295857988165681	68	0	4.109861221495384	1158	0	0.36849378166743435	55	0	unmethylated (<10%)	Q02962	Paired box protein Pax-2	axonogenesis [GO:0007409]; brain morphogenesis [GO:0048854]; branching involved in ureteric bud morphogenesis [GO:0001658]; camera-type eye development [GO:0043010]; cell fate determination [GO:0001709]; cellular response to glucose stimulus [GO:0071333]; cellular response to retinoic acid [GO:0071300]; cochlea development [GO:0090102]; cochlea morphogenesis [GO:0090103]; glial cell differentiation [GO:0010001]; inner ear morphogenesis [GO:0042472]; mesenchymal to epithelial transition [GO:0060231]; mesenchymal to epithelial transition involved in metanephros morphogenesis [GO:0003337]; mesodermal cell fate specification [GO:0007501]; mesonephros development [GO:0001823]; metanephric collecting duct development [GO:0072205]; metanephric distal convoluted tubule development [GO:0072221]; metanephric epithelium development [GO:0072207]; metanephric mesenchymal cell differentiation [GO:0072162]; metanephric mesenchyme development [GO:0072075]; metanephric nephron tubule formation [GO:0072289]; metanephros development [GO:0001656]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of programmed cell death [GO:0043069]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; nephric duct formation [GO:0072179]; nervous system development [GO:0007399]; neural tube closure [GO:0001843]; optic chiasma development [GO:0061360]; optic cup morphogenesis involved in camera-type eye development [GO:0002072]; optic nerve development [GO:0021554]; optic nerve morphogenesis [GO:0021631]; optic nerve structural organization [GO:0021633]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis [GO:0072108]; positive regulation of metanephric DCT cell differentiation [GO:2000594]; positive regulation of metanephric glomerulus development [GO:0072300]; positive regulation of optic nerve formation [GO:2000597]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pronephric field specification [GO:0039003]; pronephros development [GO:0048793]; regulation of metanephric nephron tubule epithelial cell differentiation [GO:0072307]; regulation of metanephros size [GO:0035566]; regulation of transcription by RNA polymerase II [GO:0006357]; retinal pigment epithelium development [GO:0003406]; sensory organ development [GO:0007423]; stem cell differentiation [GO:0048863]; ureter development [GO:0072189]; ureter maturation [GO:0035799]; urogenital system development [GO:0001655]; vestibulocochlear nerve formation [GO:0021650]; visual perception [GO:0007601]	hit with GO BP
GN011325	Chromosome_5A	14014	7	217	33.19537605251891	0.5632115063358187	52.06340339361776	217	0.6175115207373272	7.763023493360572	15	0.06666666666666667	55.31404587018438	202	0.6584158415841584	0.936768149882904	44	0	methylated (>=50%)	Q3UG98	Alpha/beta-tubulin-N-acetyltransferase 9 (EC 2.3.1.308)	regulation of mitotic spindle assembly [GO:1901673]	hit with GO BP
GN011324	Chromosome_5A	8553	12	72	33.730854670875715	0.29831797214931594	63.781921361978114	72	0.7361111111111112	71.56208277703605	23	0.782608695652174	60.38998835855646	49	0.7142857142857143	30.480349344978166	41	0.36585365853658536	methylated (>=50%)	Q9CR92	Cilia- and flagella-associated protein 184	cilium assembly [GO:0060271]	hit with GO BP
GN011323	Chromosome_5A	11926	5	281	34.60506456481637	0.7871714213501779	88.10538171490133	278	0.9820143884892086	82.60325406758449	15	0.8666666666666667	88.32942615431658	263	0.9885931558935361	27.455744533148213	43	0.2558139534883721	methylated (>=50%)	P04183	Thymidine kinase, cytosolic (EC 2.7.1.21)	DNA synthesis involved in mitotic DNA replication [GO:1904860]; dTMP salvage [GO:0036198]; nucleobase-containing compound metabolic process [GO:0006139]; protein homotetramerization [GO:0051289]; thymidine biosynthetic process [GO:0046105]; thymidine metabolic process [GO:0046104]	hit with GO BP
GN011322	Chromosome_5A	807	1	28	41.14002478314746	0.844016136261766	0.645682001614205	28	0	0.645682001614205	28	0	NA	NA	NA	0.8517887563884157	63	0	unmethylated (<10%)	O88582	Suppressor of cytokine signaling 2 (SOCS-2) (Cytokine-inducible SH2 protein 2)	cellular response to hormone stimulus [GO:0032870]; cytokine-mediated signaling pathway [GO:0019221]; growth hormone receptor signaling pathway [GO:0060396]; intracellular signal transduction [GO:0035556]; lactation [GO:0007595]; mammary gland alveolus development [GO:0060749]; negative regulation of growth hormone receptor signaling pathway [GO:0060400]; negative regulation of multicellular organism growth [GO:0040015]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of signal transduction [GO:0009968]; positive regulation of neuron differentiation [GO:0045666]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of multicellular organism growth [GO:0040014]; response to estradiol [GO:0032355]; response to peptide hormone [GO:0043434]	hit with GO BP
GN011330	Chromosome_5A	1089	1	8	41.8732782369146	0.16902392177405273	87.6847290640394	8	1	87.6847290640394	8	1	NA	NA	NA	92.80074314909429	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011331	Chromosome_5A	1486	3	10	33.10901749663526	0.24565637863483825	85.3395061728395	10	1	90.07444168734492	6	1	77.55102040816327	4	1	97.43589743589743	1	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011332	Chromosome_5A	207	1	4	54.589371980676326	0.44516129032258067	17.79935275080906	4	0	17.79935275080906	4	0	NA	NA	NA	0.8280430582390285	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011357	Chromosome_5A	16924	7	337	38.8974237768849	0.5264579993003191	77.07066421533965	337	0.9198813056379822	87.99665411961523	186	0.9838709677419355	68.10026611726329	151	0.8410596026490066	71.99391171993912	13	0.8461538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011356	Chromosome_5A	4555	3	60	35.58726673984632	0.4186080707268433	88.03827751196172	60	0.9833333333333333	81.38297872340425	8	1	89.07632743362832	52	0.9807692307692307	81.99115044247787	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011355	Chromosome_5A	826	2	1	42.73607748184019	0.026721014492753624	13.88888888888889	1	0	13.88888888888889	1	0	NA	NA	NA	81.0012836970475	37	0.9459459459459459	NA	NA	NA	NA	no Swiss-Prot hit
GN011354	Chromosome_5A	16485	8	183	34.121929026387626	0.3813849557522124	84.08011178388449	183	0.9617486338797814	87.21804511278195	14	1	83.8728897715988	169	0.9585798816568047	53.233082706766915	33	0.45454545454545453	methylated (>=50%)	Q0IHH9	Speckle-type POZ protein B	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of proteolysis [GO:0030162]	hit with GO BP
GN011353	Chromosome_5A	18707	10	219	36.15758806863741	0.36051167112814747	54.843815077051225	219	0.6073059360730594	80.6989247311828	79	0.9240506329113924	43.23476161738081	140	0.42857142857142855	2.5596679349705984	50	0.04	methylated (>=50%)	O35625	Axin-1 (Axis inhibition protein 1) (Protein Fused)	axial mesoderm development [GO:0048318]; axial mesoderm formation [GO:0048320]; beta-catenin destruction complex assembly [GO:1904885]; canonical Wnt signaling pathway [GO:0060070]; cell development [GO:0048468]; cellular response to glucose starvation [GO:0042149]; cytoplasmic microtubule organization [GO:0031122]; dorsal/ventral axis specification [GO:0009950]; dorsal/ventral pattern formation [GO:0009953]; epigenetic programming in the zygotic pronuclei [GO:0044725]; head development [GO:0060322]; in utero embryonic development [GO:0001701]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of gene expression [GO:0010629]; negative regulation of protein metabolic process [GO:0051248]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; negative regulation of Wnt signaling pathway [GO:0030178]; nucleocytoplasmic transport [GO:0006913]; positive regulation of JNK cascade [GO:0046330]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of protein kinase activity [GO:0045860]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]; post-anal tail morphogenesis [GO:0036342]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein catabolic process [GO:0030163]; protein polyubiquitination [GO:0000209]; protein-containing complex assembly [GO:0065003]; regulation of canonical Wnt signaling pathway [GO:0060828]; regulation of protein phosphorylation [GO:0001932]; sensory perception of sound [GO:0007605]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN011352	Chromosome_5A	387	1	2	47.803617571059434	0.09994834710743801	0	2	0	0	2	0	NA	NA	NA	0.352112676056338	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011351	Chromosome_5A	14959	8	225	33.83247543284979	0.5256208081046589	4.45859872611465	8	0	NA	NA	NA	4.45859872611465	8	0	NA	NA	NA	unmethylated (<10%)	O75340	Programmed cell death protein 6 (Apoptosis-linked gene 2 protein homolog) (ALG-2)	apoptotic signaling pathway [GO:0097190]; cellular response to heat [GO:0034605]; COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of TOR signaling [GO:0032007]; negative regulation of vascular endothelial growth factor receptor signaling pathway [GO:0030948]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; positive regulation of angiogenesis [GO:0045766]; positive regulation of apoptotic process [GO:0043065]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of protein monoubiquitination [GO:1902527]; response to calcium ion [GO:0051592]; vascular endothelial growth factor receptor-2 signaling pathway [GO:0036324]	hit with GO BP
GN011334	Chromosome_5A	520	2	9	37.11538461538461	0.5029013539651838	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O74378	2-oxoglutarate dehydrogenase, mitochondrial (EC 1.2.4.2) (2-oxoglutarate dehydrogenase complex component E1) (OGDC-E1) (Alpha-ketoglutarate dehydrogenase)	tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN011350	Chromosome_5A	3543	5	37	33.50268134349422	0.37498498240796363	43.40634778721502	37	0.2972972972972973	55.72649572649573	9	0.6666666666666666	39.04358353510896	28	0.17857142857142858	73.97260273972603	18	0.8333333333333334	sparse (10-50%)	Q6GMN2	BAR/IMD domain-containing adapter protein 2 (Brain-specific angiogenesis inhibitor 1-associated protein 2) (BAI-associated protein 2) (BAI1-associated protein 2) (Insulin receptor substrate protein of 53 kDa) (IRSp53) (Insulin receptor substrate p53) (Insulin receptor tyrosine kinase substrate protein p53)	actin crosslink formation [GO:0051764]; actin filament bundle assembly [GO:0051017]; cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to L-glutamate [GO:1905232]; dendrite development [GO:0016358]; filopodium assembly [GO:0046847]; modulation of chemical synaptic transmission [GO:0050804]; neuron differentiation [GO:0030182]; neuron migration [GO:0001764]; neuron projection morphogenesis [GO:0048812]; plasma membrane organization [GO:0007009]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of excitatory postsynaptic potential [GO:2000463]; positive regulation of neuron projection development [GO:0010976]; protein localization to synapse [GO:0035418]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; regulation of modification of postsynaptic actin cytoskeleton [GO:1905274]; regulation of postsynapse organization [GO:0099175]; regulation of synaptic plasticity [GO:0048167]; wound healing [GO:0042060]	hit with GO BP
GN011349	Chromosome_5A	4903	7	42	36.181929430960636	0.2620163679115644	73.71794871794872	42	0.9047619047619048	75.38461538461539	18	0.8888888888888888	72.79202279202279	24	0.9166666666666666	64.81481481481481	5	0.8	methylated (>=50%)	Q60437	BAR/IMD domain-containing adapter protein 2 (Brain-specific angiogenesis inhibitor 1-associated protein 2) (BAI-associated protein 2) (BAI1-associated protein 2) (Insulin receptor substrate protein of 53 kDa) (IRSp53) (Insulin receptor substrate p53) (Insulin receptor tyrosine kinase 53 kDa substrate) (p58/p53)	actin crosslink formation [GO:0051764]; actin filament bundle assembly [GO:0051017]; neuron differentiation [GO:0030182]; plasma membrane organization [GO:0007009]; positive regulation of actin filament polymerization [GO:0030838]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]	hit with GO BP
GN011348	Chromosome_5A	936	1	52	44.87179487179487	1.1067100206916938	0.9049773755656109	52	0	0.9049773755656109	52	0	NA	NA	NA	0.3477051460361613	36	0	unmethylated (<10%)	Q9N293	Beta-1,3-galactosyltransferase 5 (Beta-1,3-GalTase 5) (Beta3Gal-T5) (Beta3GalT5) (b3Gal-T5) (EC 2.4.1.-) (Beta-3-Gx-T5) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5)	glycoprotein biosynthetic process [GO:0009101]	hit with GO BP
GN011347	Chromosome_5A	384	1	23	47.395833333333336	1.1206699657403882	0.13054830287206268	23	0	0.13054830287206268	23	0	NA	NA	NA	2.987861811391223	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011346	Chromosome_5A	1266	1	47	45.97156398104266	0.7030673976746384	0.6542056074766355	47	0	0.6542056074766355	47	0	NA	NA	NA	0.450112528132033	65	0	unmethylated (<10%)	Q6DIV6	Vesicular inhibitory amino acid transporter (GABA and glycine transporter) (Solute carrier family 32 member 1) (Vesicular GABA transporter)	amino acid transmembrane transport [GO:0003333]; beta-alanine transport [GO:0001762]; gamma-aminobutyric acid import [GO:0051939]; gamma-aminobutyric acid transport [GO:0015812]; glycine transport [GO:0015816]	hit with GO BP
GN011345	Chromosome_5A	16372	22	208	35.60346933789396	0.4012145621152948	71.98566430582814	207	0.8164251207729468	65.82959641255606	51	0.7254901960784313	73.43239540520602	156	0.8461538461538461	12.469586374695863	24	0.125	methylated (>=50%)	Q9UBC3	DNA (cytosine-5)-methyltransferase 3B (Dnmt3b) (EC 2.1.1.37) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB)	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of gene expression [GO:0010628]	hit with GO BP
GN011344	Chromosome_5A	531	1	5	39.736346516007536	0.25731730955611554	87.34567901234568	5	1	87.34567901234568	5	1	NA	NA	NA	85.49955791335101	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011343	Chromosome_5A	20219	21	346	36.88609723527375	0.5032635132165253	82.35413598740669	333	0.975975975975976	84.45887445887446	40	0.95	82.0744405453604	293	0.9795221843003413	88.89583984985924	35	1	methylated (>=50%)	Q6PHN1	Coiled-coil domain-containing protein 57	axoneme assembly [GO:0035082]; centriole replication [GO:0007099]; cerebrospinal fluid circulation [GO:0090660]; ciliary basal body organization [GO:0032053]; cilium assembly [GO:0060271]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; establishment of epithelial cell polarity [GO:0090162]; G2/M transition of mitotic cell cycle [GO:0000086]; microtubule nucleation [GO:0007020]; positive regulation of mitotic cell cycle [GO:0045931]	hit with GO BP
GN011342	Chromosome_5A	4516	4	80	33.680248007085915	0.6253115480476322	78.96671431488666	79	0.7974683544303798	66.4	8	0.75	80.39572435751649	71	0.8028169014084507	52.49025552187094	30	0.6	methylated (>=50%)	O70201	Baculoviral IAP repeat-containing protein 5 (Apoptosis inhibitor 4) (Apoptosis inhibitor survivin) (TIAP)	cell division [GO:0051301]; chromosome localization [GO:0050000]; G2/M transition of mitotic cell cycle [GO:0000086]; meiosis I [GO:0007127]; microtubule cytoskeleton organization [GO:0000226]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; mitotic spindle assembly checkpoint signaling [GO:0007094]; mitotic spindle midzone assembly [GO:0051256]; mitotic spindle organization [GO:0007052]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neuron apoptotic process [GO:0043524]; positive regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902425]; positive regulation of cell cycle [GO:0045787]; positive regulation of exit from mitosis [GO:0031536]; positive regulation of mitotic cell cycle [GO:0045931]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of mitotic cytokinesis [GO:1903490]; positive regulation of mitotic sister chromatid separation [GO:1901970]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of protein ubiquitination [GO:0031398]; protein-containing complex localization [GO:0031503]; regulation of cell cycle [GO:0051726]; regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0061178]; regulation of mitotic cell cycle [GO:0007346]; regulation of type B pancreatic cell proliferation [GO:0061469]	hit with GO BP
GN011341	Chromosome_5A	3261	1	59	40.99969334559951	0.4313105272596844	92.6056338028169	59	1	92.6056338028169	59	1	NA	NA	NA	87.54208754208754	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011340	Chromosome_5A	1577	3	21	36.398224476854786	0.40488794884647833	84.45497630331754	21	0.9523809523809523	90.7843137254902	12	0.9166666666666666	78.53211009174312	9	1	9.323116219667943	19	0.05263157894736842	methylated (>=50%)	Q28DT9	SPRY domain-containing SOCS box protein 3 (SSB-3)	negative regulation of cGAS/STING signaling pathway [GO:0160049]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN011339	Chromosome_5A	7645	10	81	34.911706998037936	0.3559116584783813	82.3765354725495	79	0.9367088607594937	77.30337078651685	16	0.875	83.83349467570184	63	0.9523809523809523	3.0927835051546393	34	0.029411764705882353	methylated (>=50%)	Q9EP80	PRKCA-binding protein (Protein interacting with C kinase 1) (Protein kinase C-alpha-binding protein)	AMPA glutamate receptor clustering [GO:0097113]; cellular response to decreased oxygen levels [GO:0036294]; cellular response to glucose starvation [GO:0042149]; cellular response to glycine [GO:1905430]; dendritic spine maintenance [GO:0097062]; dendritic spine organization [GO:0097061]; glial cell development [GO:0021782]; intracellular protein transport [GO:0006886]; long-term synaptic depression [GO:0060292]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; negative regulation of gene expression [GO:0010629]; positive regulation of AMPA glutamate receptor clustering [GO:1904719]; positive regulation of receptor internalization [GO:0002092]; protein insertion into plasma membrane [GO:0098737]; protein phosphorylation [GO:0006468]; protein targeting [GO:0006605]; receptor clustering [GO:0043113]; regulation of Arp2/3 complex-mediated actin nucleation [GO:0034315]; regulation of insulin secretion [GO:0050796]; regulation of kainate selective glutamate receptor signaling pathway [GO:0106426]; regulation of postsynaptic neurotransmitter receptor internalization [GO:0099149]; response to phorbol 13-acetate 12-myristate [GO:1904627]	hit with GO BP
GN011338	Chromosome_5A	30630	28	361	36.64707802807705	0.35431377630670274	67.35532600244363	335	0.7373134328358208	59.488803438136166	108	0.6666666666666666	69.91534781008465	227	0.7709251101321586	72.48592115848753	24	0.875	methylated (>=50%)	P12276	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.39); Acyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]	fatty acid biosynthetic process [GO:0006633]; lactate metabolic process [GO:0006089]; positive regulation of appetite [GO:0032100]	hit with GO BP
GN011333	Chromosome_5A	4118	2	69	34.11850412821758	0.5758273381294964	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011335	Chromosome_5A	4554	5	77	34.40931049626702	0.5718287993581443	22.193877551020407	35	0.02857142857142857	NA	NA	NA	22.193877551020407	35	0.02857142857142857	0.5208333333333334	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011336	Chromosome_5A	1769	5	27	33.91746749576031	0.5307943634423897	13.043478260869565	17	0	16.666666666666668	5	0	11.885245901639344	12	0	1.1522134627046694	36	0	sparse (10-50%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN011337	Chromosome_5A	300	1	9	45.666666666666664	0.5779109589041096	0.7561436672967864	9	0	0.7561436672967864	9	0	NA	NA	NA	0.47468354430379744	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011361	Chromosome_5A	2508	3	19	37.79904306220096	0.21419806083598916	0.9478672985781991	11	0	0.9478672985781991	11	0	NA	NA	NA	10.714285714285714	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011360	Chromosome_5A	625	3	4	31.68	0.25531045751633985	5.555555555555555	1	0	5.555555555555555	1	0	NA	NA	NA	6.446280991735537	68	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011359	Chromosome_5A	192	1	14	54.6875	1.0557737627651218	0.5154639175257731	14	0	0.5154639175257731	14	0	NA	NA	NA	1.4492753623188406	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011358	Chromosome_5A	786	1	28	39.69465648854962	0.9244339900029404	0.3262642740619902	28	0	0.3262642740619902	28	0	NA	NA	NA	0.9192645883293366	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011366	Chromosome_5A	2787	2	92	39.0383925367779	0.8673666833552088	0.9453471196454948	92	0	0.9775733179988499	52	0	0.9113001215066828	40	0	1.1764705882352942	41	0	unmethylated (<10%)	Q92035	Acetylcholinesterase (BfAChE) (EC 3.1.1.7)	acetylcholine catabolic process in synaptic cleft [GO:0001507]; choline metabolic process [GO:0019695]	hit with GO BP
GN011382	Chromosome_5A	2339	2	65	37.280889268918344	0.8030922498309668	0.6309148264984227	65	0	0.6663890045814244	59	0	0.4424778761061947	6	0	0.8123005512039455	45	0	unmethylated (<10%)	Q8VCT4	Carboxylesterase 1D (Carboxylesterase 3) (EC 3.1.1.1, EC 3.1.1.67) (Fatty acid ethyl ester synthase) (FAEE synthase) (Triacylglycerol hydrolase) (TGH)	acyl-CoA metabolic process [GO:0006637]; acylglycerol catabolic process [GO:0046464]; cellular response to cold [GO:0070417]; circadian temperature homeostasis [GO:0060086]; cold-induced thermogenesis [GO:0106106]; cytosolic lipolysis [GO:0061725]; lipid catabolic process [GO:0016042]; positive regulation of transcription by RNA polymerase II [GO:0045944]; response to toxic substance [GO:0009636]; short-chain fatty acid catabolic process [GO:0019626]; very-low-density lipoprotein particle assembly [GO:0034379]	hit with GO BP
GN011381	Chromosome_5A	1407	1	45	39.6588486140725	0.81348288621646625	0.8393956351426972	45	0	0.8393956351426972	45	0	NA	NA	NA	0.5077983315197678	50	0	unmethylated (<10%)	P30122	Bile salt-activated lipase (BAL) (EC 3.1.1.13) (EC 3.1.1.3) (EC 3.1.1.6) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Cholesterol esterase) (Pancreatic lysophospholipase) (Sterol esterase)	ceramide catabolic process [GO:0046514]; pancreatic juice secretion [GO:0030157]	hit with GO BP
GN011380	Chromosome_5A	1879	2	50	39.27621075039915	0.6912917111217395	0.6550218340611353	50	0	0.585480093676815	47	0	1.6129032258064515	3	0	0.482780817508851	53	0	unmethylated (<10%)	Q91WU0	Carboxylesterase 1F (EC 3.1.1.1) (Carboxylic ester hydrolase) (Triacylglycerol hydrolase 2) (TGH-2)	cellular response to cholesterol [GO:0071397]; cellular response to low-density lipoprotein particle stimulus [GO:0071404]; cholesterol biosynthetic process [GO:0006695]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; epithelial cell differentiation [GO:0030855]; medium-chain fatty acid metabolic process [GO:0051791]; negative regulation of cholesterol storage [GO:0010887]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of cholesterol metabolic process [GO:0090205]; regulation of bile acid biosynthetic process [GO:0070857]; regulation of bile acid secretion [GO:0120188]; reverse cholesterol transport [GO:0043691]; short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN011379	Chromosome_5A	2059	2	62	39.67945604662457	0.7650605297854489	0.5949429846306395	62	0	0.6410256410256411	54	0	0.437636761487965	8	0	0.702247191011236	46	0	unmethylated (<10%)	P16303	Carboxylesterase 1D (Carboxyesterase ES-10) (Carboxylesterase 3) (EC 3.1.1.1, EC 3.1.1.67) (ES-HVEL) (Fatty acid ethyl ester synthase) (FAEE synthase) (Liver carboxylesterase 10) (pI 6.1 esterase)	acylglycerol catabolic process [GO:0046464]; cellular response to cholesterol [GO:0071397]; cellular response to cold [GO:0070417]; cellular response to low-density lipoprotein particle stimulus [GO:0071404]; cholesterol biosynthetic process [GO:0006695]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; circadian temperature homeostasis [GO:0060086]; cold-induced thermogenesis [GO:0106106]; cytosolic lipolysis [GO:0061725]; epithelial cell differentiation [GO:0030855]; lipid catabolic process [GO:0016042]; medium-chain fatty acid metabolic process [GO:0051791]; negative regulation of cholesterol storage [GO:0010887]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of cholesterol metabolic process [GO:0090205]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of bile acid biosynthetic process [GO:0070857]; regulation of bile acid secretion [GO:0120188]; response to ethanol [GO:0045471]; retinoid metabolic process [GO:0001523]; reverse cholesterol transport [GO:0043691]; short-chain fatty acid catabolic process [GO:0019626]; very-low-density lipoprotein particle assembly [GO:0034379]	hit with GO BP
GN011378	Chromosome_5A	4902	6	215	38.453692370461034	1.186769902236996	0.917912404930501	215	0	0.9494119314156158	138	0	0.867183934276586	77	0	0.48505711156313563	106	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011377	Chromosome_5A	501	1	16	41.71656686626746	0.7447045707915273	0.37546933667083854	16	0	0.37546933667083854	16	0	NA	NA	NA	0.5502063273727648	108	0	unmethylated (<10%)	Q24180	Deformed epidermal autoregulatory factor 1 (Protein DEAF-1)	embryo development ending in birth or egg hatching [GO:0009792]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of immune response [GO:0050776]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011376	Chromosome_5A	4726	5	143	37.34659331358443	0.8677750470599414	0.6237932570919352	143	0	0.6604013208026416	80	0	0.5722460658082976	63	0	0.9970918155380141	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011375	Chromosome_5A	1292	2	43	47.523219814241486	0.6029978400790162	0	9	0	0	8	0	0	1	0	1.6773162939297124	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011374	Chromosome_5A	5334	8	117	35.00187476565429	0.7165403692477267	0.48503325942350334	116	0	0.5314160675211004	66	0	0.4480955937266617	50	0	0.6618133686300464	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011373	Chromosome_5A	483	1	15	51.75983436853002	1.0977272727272727	0.4366812227074236	10	0	0.4366812227074236	10	0	NA	NA	NA	0.8054260279779568	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011372	Chromosome_5A	7140	7	232	36.96078431372549	0.9517932311256521	2.39284032030146	223	0	2.0802812774685027	104	0	2.5409608442099416	119	0	4.750705550329257	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011371	Chromosome_5A	768	1	4	44.791666666666664	0.10412500423685726	0	4	0	0	4	0	NA	NA	NA	0.3798670465337132	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011370	Chromosome_5A	16368	16	254	34.872922776148584	0.5107111247328959	89.33911159263272	253	0.9446640316205533	96.72714336535041	51	1	88.01201354719151	202	0.9306930693069307	94.42379182156134	43	1	methylated (>=50%)	Q91821	Maternal embryonic leucine zipper kinase (MELK) (EC 2.7.11.1) (Protein kinase Eg3) (pEg3 kinase)	apoptotic process [GO:0006915]; cell population proliferation [GO:0008283]; hemopoiesis [GO:0030097]; intracellular signal transduction [GO:0035556]; neural precursor cell proliferation [GO:0061351]; positive regulation of apoptotic process [GO:0043065]; protein autophosphorylation [GO:0046777]	hit with GO BP
GN011369	Chromosome_5A	10260	4	203	35.38986354775828	0.6338460227514805	92.56268081002894	200	0.995	95.76502732240438	59	1	91.8764637002342	141	0.9929078014184397	91.96428571428571	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011368	Chromosome_5A	16715	8	223	36.15315584804068	0.4099863478856161	65.08024789448594	223	0.7309417040358744	85.9738065061259	104	0.9134615384615384	52.48344370860927	119	0.5714285714285714	0.5006257822277848	48	0	methylated (>=50%)	Q18PE1	Protein Dok-7 (Downstream of tyrosine kinase 7)	enzyme-linked receptor protein signaling pathway [GO:0007167]; neuromuscular junction development [GO:0007528]; positive regulation of protein tyrosine kinase activity [GO:0061098]; positive regulation of Rac protein signal transduction [GO:0035022]	hit with GO BP
GN011367	Chromosome_5A	507	1	17	44.57593688362919	0.6763182674199624	0.40540540540540543	17	0	0.40540540540540543	17	0	NA	NA	NA	0.6670902160101652	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011386	Chromosome_5A	6668	7	180	34.388122375524894	0.9135205980536769	0.7452305246422893	180	0	0.3560528992878942	42	0	0.8397135095085206	138	0	0.388755980861244	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011385	Chromosome_5A	4166	8	116	35.04560729716755	0.9112896686586247	0.4895767530006317	116	0	0.6451612903225806	45	0	0.37868542061130644	71	0	0.5817932922655715	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011384	Chromosome_5A	3986	7	82	31.234320120421476	0.8474254602022298	0.5480453050785532	82	0	0.40022870211549455	27	0	0.6174496644295302	55	0	0.5	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011387	Chromosome_5A	2289	3	66	36.52249890782001	0.8734620721554116	0.7523510971786834	66	0	0.6518196632265073	35	0	0.8895478131949592	31	0	0.6051437216338881	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011393	Chromosome_5A	498	1	12	34.738955823293175	0.8106348345089528	1.002004008016032	12	0	1.002004008016032	12	0	NA	NA	NA	0.8309248554913294	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011394	Chromosome_5A	591	1	17	35.87140439932318	0.9383580834967779	13.010204081632653	17	0.11764705882352941	13.010204081632653	17	0.11764705882352941	NA	NA	NA	0.615530303030303	45	0	sparse (10-50%)	Q75VW3	Chaperone protein DnaJ	protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN011395	Chromosome_5A	3661	4	123	38.104343075662385	0.9255971223021583	0.5715306304697267	122	0	0.9272816007808687	56	0	0.36619718309859156	66	0	0.3111111111111111	45	0	unmethylated (<10%)	Q9BSW7	Synaptotagmin-17 (Protein B/K) (Synaptotagmin XVII) (SytXVII)	positive regulation of dendrite extension [GO:1903861]; regulation of calcium ion-dependent exocytosis [GO:0017158]; regulation of postsynaptic neurotransmitter receptor internalization [GO:0099149]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN011396	Chromosome_5A	537	1	25	40.59590316573557	1.132338056680162	0.7692307692307693	25	0	0.7692307692307693	25	0	NA	NA	NA	0.4792332268370607	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011397	Chromosome_5A	2291	5	65	36.44696639022261	0.8556661342036613	0.694815606627472	65	0	1.0401188707280833	30	0	0.5008347245409015	35	0	0.8641005498821681	63	0	unmethylated (<10%)	Q5AF03	Glyoxalase 3 (EC 4.2.1.130) (Glutathione-independent glyoxalase)	methylglyoxal catabolic process [GO:0051596]	hit with GO BP
GN011408	Chromosome_5A	3196	5	71	36.3892365456821	0.6713769209375536	2.100941801497223	68	0	1.9646365422396856	20	0	2.1453730387447965	48	0	6.3398140321217245	20	0	unmethylated (<10%)	Q04432	Glutathione-independent glyoxalase HSP31 (EC 4.2.1.130) (Glyoxalase 3 homolog 1) (Heat shock protein 31)	cellular response to nutrient levels [GO:0031669]; cellular response to oxidative stress [GO:0034599]; protein folding [GO:0006457]	hit with GO BP
GN011407	Chromosome_5A	8222	6	221	37.08343468742398	0.7827986617486014	0.9450679267572357	217	0	0.8385744234800838	60	0	0.9868421052631579	157	0	0.3263973888208894	43	0	unmethylated (<10%)	Q7XWV4	NAD-dependent protein deacetylase SRT1 (EC 2.3.1.286) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (OsSRT1)	negative regulation of transcription by RNA polymerase II [GO:0000122]	hit with GO BP
GN011406	Chromosome_5A	6175	6	133	37.05263157894737	0.6313541894888973	1.1178694722998521	133	0	1.25	54	0	1.053147195689444	79	0	51.58371040723982	40	0.575	unmethylated (<10%)	A0A2K5TU92	NAD-dependent protein deacylase sirtuin-6 (EC 2.3.1.-) (NAD-dependent protein deacetylase sirtuin-6) (EC 2.3.1.286) (Protein mono-ADP-ribosyltransferase sirtuin-6) (EC 2.4.2.-)	cardiac muscle cell differentiation [GO:0055007]; circadian regulation of gene expression [GO:0032922]; determination of adult lifespan [GO:0008340]; double-strand break repair [GO:0006302]; ketone biosynthetic process [GO:0042181]; negative regulation of cellular senescence [GO:2000773]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of glycolytic process [GO:0045820]; negative regulation of protein import into nucleus [GO:0042308]; negative regulation of protein localization to chromatin [GO:0120186]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; neuron differentiation [GO:0030182]; pericentric heterochromatin formation [GO:0031508]; positive regulation of blood vessel branching [GO:1905555]; positive regulation of chondrocyte proliferation [GO:1902732]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of insulin secretion [GO:0032024]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein export from nucleus [GO:0046827]; positive regulation of protein localization to chromatin [GO:0120187]; positive regulation of stem cell differentiation [GO:2000738]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of telomere maintenance [GO:0032206]; positive regulation of vascular endothelial cell proliferation [GO:1905564]; protein delipidation [GO:0051697]; protein destabilization [GO:0031648]; protein import into nucleus [GO:0006606]; protein localization to site of double-strand break [GO:1990166]; regulation of circadian rhythm [GO:0042752]; regulation of double-strand break repair via homologous recombination [GO:0010569]; regulation of lipid catabolic process [GO:0050994]; regulation of lipid metabolic process [GO:0019216]; regulation of protein localization to plasma membrane [GO:1903076]; response to UV [GO:0009411]; subtelomeric heterochromatin formation [GO:0031509]; transposable element silencing [GO:0010526]	hit with GO BP
GN011405	Chromosome_5A	4019	6	67	34.78477233142573	0.5517075349538593	88.76142329379739	67	0.9850746268656716	93.17673378076063	16	1	87.832431160273	51	0.9803921568627451	17.45262230057294	31	0.22580645161290322	methylated (>=50%)	Q9H0I2	Enkurin domain-containing protein 1	establishment of mitotic spindle orientation [GO:0000132]; motile cilium assembly [GO:0044458]; non-motile cilium assembly [GO:1905515]	hit with GO BP
GN011404	Chromosome_5A	4627	11	42	33.15323103522801	0.33272723537146615	65.1975051975052	41	0.7317073170731707	51.293103448275865	15	0.5333333333333333	73.93364928909952	26	0.8461538461538461	23.189983669025587	25	0.36	methylated (>=50%)	A6NN90	Uncharacterized protein C2orf81	NA	hit, no GO BP
GN011403	Chromosome_5A	11180	14	112	32.1824686940966	0.3877850916923325	78.1524734286839	112	0.8482142857142857	69.56521739130434	31	0.7419354838709677	80.8407994486561	81	0.8888888888888888	20.775310500564547	35	0.2857142857142857	methylated (>=50%)	Q9Y5X2	Sorting nexin-8	early endosome to Golgi transport [GO:0034498]; intracellular protein transport [GO:0006886]	hit with GO BP
GN011402	Chromosome_5A	19397	25	226	33.93308243542816	0.40591127257642684	83.80372250423012	225	0.9422222222222222	88.40517241379311	67	0.9701492537313433	81.69708929452392	158	0.930379746835443	9.538894755367828	39	0.10256410256410256	methylated (>=50%)	Q6IPM2	IQ domain-containing protein E	limb morphogenesis [GO:0035108]	hit with GO BP
GN011401	Chromosome_5A	4688	6	40	31.996587030716725	0.33431984310928864	68.52323360916614	40	0.775	72.5296442687747	8	0.875	67.75417298937785	32	0.75	69.93041749502981	47	0.6382978723404256	methylated (>=50%)	P0CW27	Coiled-coil domain-containing protein 166	NA	hit, no GO BP
GN011400	Chromosome_5A	261	1	5	48.65900383141762	0.33896103896103896	84.69945355191257	5	1	84.69945355191257	5	1	NA	NA	NA	84.30034129692832	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011399	Chromosome_5A	363	1	2	51.790633608815426	0.0856637168141593	88.88888888888889	2	1	88.88888888888889	2	1	NA	NA	NA	82.04393505253104	18	0.9444444444444444	NA	NA	NA	NA	no Swiss-Prot hit
GN011398	Chromosome_5A	11444	9	156	33.06536176162181	0.5004154095063186	78.19787033292897	156	0.967948717948718	90.19607843137256	14	1	77.54565479997157	142	0.9647887323943662	86.75099866844208	52	1	methylated (>=50%)	O35093	Mitochondrial import inner membrane translocase subunit Tim23	intracellular protein transport [GO:0006886]; positive regulation of protein processing [GO:0010954]; protein import into mitochondrial matrix [GO:0030150]; response to 3,3',5-triiodo-L-thyronine [GO:1905242]; type 2 mitophagy [GO:0061734]	hit with GO BP
GN011412	Chromosome_5A	426	1	21	46.244131455399064	0.9454660748256183	NA	0	NA	NA	NA	NA	NA	NA	NA	32.51700680272109	19	0.15789473684210525	NA	NA	NA	NA	no Swiss-Prot hit
GN011411	Chromosome_5A	486	1	19	47.325102880658434	0.6982758620689655	NA	0	NA	NA	NA	NA	NA	NA	NA	42.69662921348315	14	0.21428571428571427	NA	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN011410	Chromosome_5A	264	1	5	44.696969696969695	0.38316400580551524	33.027522935779814	5	0	33.027522935779814	5	0	NA	NA	NA	52.16230646022424	22	0.5	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011392	Chromosome_5A	200	1	2	39.5	0.25839793281653745	7.708779443254818	2	0	7.708779443254818	2	0	NA	NA	NA	26.220684352172242	16	0.3125	NA	NA	NA	NA	no Swiss-Prot hit
GN011417	Chromosome_5A	12198	8	167	36.07148712903755	0.4226923447231776	85.94771241830065	167	0.874251497005988	82.13689482470785	26	0.6538461538461539	86.4789387945078	141	0.9148936170212766	0.4716981132075472	39	0	methylated (>=50%)	O93327	Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y)	heterochromatin formation [GO:0031507]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901837]; nucleosome assembly [GO:0006334]; regulation of NAD metabolic process [GO:1902688]	hit with GO BP
GN011416	Chromosome_5A	19628	5	357	33.60505400448339	0.6452048815791654	74.27982100405538	348	0.8419540229885057	47.12328767123287	5	0.6	74.6308297036014	343	0.8454810495626822	0.24509803921568626	6	0	methylated (>=50%)	A7RZS0	Biogenesis of lysosome-related organelles complex 1 subunit 2 (BLOC-1 subunit 2)	endosomal transport [GO:0016197]; lysosome localization [GO:0032418]	hit with GO BP
GN011415	Chromosome_5A	19888	6	270	36.26810136765889	0.41414683943249014	81.37007568406753	250	0.896	89.4578313253012	6	0.8333333333333334	81.19256957757652	244	0.8975409836065574	0	1	0	methylated (>=50%)	Q6GPV5	E3 ubiquitin-protein ligase RNF181 (EC 2.3.2.27) (RING finger protein 181)	protein ubiquitination [GO:0016567]	hit with GO BP
GN011414	Chromosome_5A	9139	9	152	35.84637268847795	0.5202633061278299	71.03033006244425	152	0.6973684210526315	62.54886630179828	25	0.64	72.44114969436858	127	0.7086614173228346	0.5827905382242029	83	0	methylated (>=50%)	Q99020	Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) (CArG-binding factor-A) (CBF-A)	chromosomal 5-methylcytosine DNA demethylation pathway [GO:0141166]; epithelial to mesenchymal transition [GO:0001837]; mRNA modification [GO:0016556]; negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:2000623]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of cellular localization [GO:0060341]; regulation of gene expression [GO:0010468]; regulation of intracellular mRNA localization [GO:1904580]	hit with GO BP
GN011413	Chromosome_5A	7660	15	93	36.43603133159269	0.3670900034731276	71.18041847611528	93	0.8494623655913979	73.85188249896567	50	0.88	68.74292185730464	43	0.813953488372093	3.397027600849257	34	0.029411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011418	Chromosome_5A	4219	6	123	37.662953306470726	0.8240391394653099	0.4765034505422281	123	0	0.6727534839019702	51	0	0.37453183520599254	72	0	5.238439306358382	52	0	unmethylated (<10%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN011419	Chromosome_5A	378	1	8	37.83068783068783	0.5915492957746479	0.37037037037037035	8	0	0.37037037037037035	8	0	NA	NA	NA	0.45558086560364464	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011420	Chromosome_5A	1535	2	12	35.76547231270359	0.2465863453815261	0.1631321370309951	12	0	0.23980815347721823	9	0	0	3	0	0.6619593998234775	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011421	Chromosome_5A	1356	2	17	35.10324483775811	0.4085857601162729	0.5312084993359893	17	0	0.44642857142857145	9	0	0.6557377049180327	8	0	0.5714285714285714	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011422	Chromosome_5A	2068	5	38	35.49323017408124	0.5871137409598948	0.6181134103735555	37	0	0.7389162561576355	23	0	0.38910505836575876	14	0	0.7340674007340674	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011423	Chromosome_5A	549	3	9	38.61566484517304	0.43990384615384615	0.7692307692307693	9	0	0.625	7	0	1.1764705882352942	2	0	1.0624841892233747	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011424	Chromosome_5A	318	1	7	40.56603773584906	0.5358690418873375	0	7	0	0	7	0	NA	NA	NA	0.7563901930099113	46	0	unmethylated (<10%)	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN011425	Chromosome_5A	516	3	5	38.75968992248062	0.2606060606060606	0.42735042735042733	5	0	0.5714285714285714	4	0	0	1	0	0.6998444790046656	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011426	Chromosome_5A	354	1	8	43.220338983050844	0.4841025641025641	1.3636363636363635	8	0	1.3636363636363635	8	0	NA	NA	NA	0.899165061014772	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011427	Chromosome_5A	6517	3	185	36.39711523707227	0.8575176870646691	1.113919311054947	185	0	0.7683863885839737	20	0	1.146131805157593	165	0	0.4417448923246825	35	0	unmethylated (<10%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN011428	Chromosome_5A	7401	5	191	35.873530603972434	0.8023998356137013	1.0497798848628512	182	0	0.6512301013024602	45	0	1.1234452320449377	137	0	1.3080168776371308	69	0	unmethylated (<10%)	Q9VE46	High-affinity choline transporter 1	acetylcholine biosynthetic process [GO:0008292]; amino acid transmembrane transport [GO:0003333]; choline transport [GO:0015871]	hit with GO BP
GN011429	Chromosome_5A	1072	2	27	46.64179104477612	0.4955824943497021	0.7142857142857143	23	0	0.7142857142857143	23	0	NA	NA	NA	0.5753739930955121	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011430	Chromosome_5A	1424	3	44	37.359550561797754	0.8891537882980686	0.578642819568648	44	0	0.4699248120300752	30	0	0.7168458781362007	14	0	0.780107264748903	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011449	Chromosome_5A	924	1	41	41.666666666666664	1.022896641105951	1.1893870082342177	41	0	1.1893870082342177	41	0	NA	NA	NA	0.4038073262186328	84	0	unmethylated (<10%)	Q1LZD0	Adenosine receptor A2b	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; vasodilation [GO:0042311]	hit with GO BP
GN011448	Chromosome_5A	2042	2	105	44.66209598432909	1.0339988425925926	3.648424543946932	42	0	2.980132450331126	14	0	4.318936877076412	28	0	0.6301693580149665	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011447	Chromosome_5A	444	1	13	39.63963963963964	0.7532298055591805	0.18867924528301888	13	0	0.18867924528301888	13	0	NA	NA	NA	0.9148766905330151	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011446	Chromosome_5A	5717	4	142	37.18733601539269	0.7218434343434343	0.5009741163373226	142	0	0.4801920768307323	135	0	0.7662835249042146	7	0	0.6610009442870632	47	0	unmethylated (<10%)	Q8IVG5	Sterile alpha motif domain-containing protein 9-like (SAM domain-containing protein 9-like)	NA	hit, no GO BP
GN011445	Chromosome_5A	627	2	18	34.44976076555024	0.9729310344827586	0.46893317702227433	18	0	0.8733624454148472	12	0	0	6	0	0.7502679528403001	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011444	Chromosome_5A	11118	7	135	36.69724770642202	0.36251860983449447	74.78899484818591	128	0.8515625	67.4342105263158	11	0.7272727272727273	75.60589453172574	117	0.8632478632478633	0.6475716064757161	52	0	methylated (>=50%)	A6HD62	E3 ubiquitin-protein ligase CHIP (EC 2.3.2.27) (Carboxy terminus of Hsp70-interacting protein) (RING-type E3 ubiquitin transferase CHIP) (STIP1 homology and U box-containing protein 1)	cellular response to heat [GO:0034605]; cellular response to hypoxia [GO:0071456]; cellular response to misfolded protein [GO:0071218]; chaperone-mediated autophagy [GO:0061684]; endoplasmic reticulum unfolded protein response [GO:0030968]; ERAD pathway [GO:0036503]; MAPK cascade [GO:0000165]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cardiac muscle hypertrophy [GO:0010614]; negative regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035359]; negative regulation of smooth muscle cell apoptotic process [GO:0034392]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of vascular associated smooth muscle contraction [GO:1904694]; positive regulation of chaperone-mediated protein complex assembly [GO:0090035]; positive regulation of ERAD pathway [GO:1904294]; positive regulation of mitophagy [GO:1901526]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of proteolysis [GO:0045862]; positive regulation of smooth muscle cell apoptotic process [GO:0034393]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; regulation of glucocorticoid metabolic process [GO:0031943]; regulation of protein stability [GO:0031647]; response to ischemia [GO:0002931]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN011443	Chromosome_5A	27057	9	377	34.70081679417526	0.4642380866516194	76.78051891116337	375	0.92	71.40612725844461	27	0.8148148148148148	77.06776387606013	348	0.9281609195402298	0.6800709639266707	60	0	methylated (>=50%)	D3YZP9	Coiled-coil domain-containing protein 6	NA	hit, no GO BP
GN011442	Chromosome_5A	7062	7	79	36.64684225431889	0.333788637265161	92.14165968147528	78	0.9871794871794872	94.16909620991254	13	1	91.80127263827704	65	0.9846153846153847	2.3520289480485914	64	0.015625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011451	Chromosome_5A	740	2	28	36.62162162162162	1.1367127496159755	0.6754583467352847	28	0	0.7187780772686433	13	0	0.6513026052104208	15	0	1.7223382045929019	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015803	Chromosome_5A	655	2	8	35.11450381679389	0.3998778998778999	0.33003300330033003	8	0	0.3816793893129771	7	0	0	1	0	1.5873015873015872	36	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN011468	Chromosome_5A	357	1	6	39.77591036414566	0.4252531268612269	0.26455026455026454	6	0	0.26455026455026454	6	0	NA	NA	NA	4.16471689284043	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011467	Chromosome_5A	483	1	17	42.2360248447205	0.8440583881578947	0.5988023952095808	17	0	0.5988023952095808	17	0	NA	NA	NA	0.6032171581769437	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011466	Chromosome_5A	42369	14	554	32.5733437182846	0.4937590427239388	79.85658579990056	554	0.9043321299638989	75.94740912606342	51	0.7843137254901961	80.14035087719299	503	0.9165009940357853	6.888472352389878	42	0.023809523809523808	methylated (>=50%)	Q3TEL6	E3 ubiquitin ligase Rnf157 (EC 2.3.2.27) (RING finger protein 157) (RING-type E3 ubiquitin transferase Rnf157)	negative regulation of apoptotic process [GO:0043066]; positive regulation of dendrite extension [GO:1903861]; protein ubiquitination [GO:0016567]	hit with GO BP
GN011465	Chromosome_5A	4062	3	45	33.653372722796654	0.3913294797687861	12.041432887354338	43	0.06976744186046512	17.311608961303463	12	0.16666666666666666	10.624315443592552	31	0.03225806451612903	52.61791432280398	46	0.4782608695652174	sparse (10-50%)	Q6DGM1	UBA-like domain-containing protein 1	NA	hit, no GO BP
GN011464	Chromosome_5A	8694	6	209	35.73729008511617	0.7529955368428032	1.208026208026208	209	0	0.34083162917518744	33	0	1.3612817732803277	176	0	0.6449532408900355	62	0	unmethylated (<10%)	Q3UMF9	Failed axon connections homolog	NA	hit, no GO BP
GN011471	Chromosome_5A	5578	5	176	38.63391896737182	0.8467800504758636	1.1448763250883391	175	0	0.6139154160982264	32	0	1.2836512747370297	143	0	2.6010877275951763	65	0	unmethylated (<10%)	Q3UMF9	Failed axon connections homolog	NA	hit, no GO BP
GN011469	Chromosome_5A	13199	8	253	36.0027274793545	0.5951269178106239	80.79116612061642	253	0.9604743083003953	78.40968020743301	87	0.9655172413793104	82.0790875946527	166	0.95783132530120485	81.00539811066128	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011473	Chromosome_5A	1648	2	21	38.10679611650485	0.35542409957790305	89.21465968586388	20	1	84.4574780058651	9	1	91.85667752442997	11	1	81.61592505854802	38	0.9736842105263158	methylated (>=50%)	Q9D882	Protein FAM241B	NA	hit, no GO BP
GN011472	Chromosome_5A	708	1	27	44.2090395480226	0.781840490797546	1.301775147928994	27	0	1.301775147928994	27	0	NA	NA	NA	0.4616272360069244	69	0	unmethylated (<10%)	Q6GPB5	RNA demethylase ALKBH5 (EC 1.14.11.53) (Alkylated DNA repair protein alkB homolog 5) (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5)	membraneless organelle assembly [GO:0140694]; mRNA destabilization [GO:0061157]; mRNA export from nucleus [GO:0006406]; mRNA processing [GO:0006397]; regulation of mRNA export from nucleus [GO:0010793]; regulation of mRNA processing [GO:0050684]; regulation of translation [GO:0006417]; response to hypoxia [GO:0001666]; spermatogenesis [GO:0007283]	hit with GO BP
GN011513	Chromosome_5A	591	1	29	47.03891708967851	0.8916809739347589	0.4798464491362764	29	0	0.4798464491362764	29	0	NA	NA	NA	0.8848080133555927	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011515	Chromosome_5A	165	1	9	47.27272727272727	0.9821428571428571	0.33003300330033003	9	0	0.33003300330033003	9	0	NA	NA	NA	0.6045678459471563	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011481	Chromosome_5A	288	1	1	41.666666666666664	0.08110391439031259	0.6024096385542169	1	0	0.6024096385542169	1	0	NA	NA	NA	0.3597122302158273	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011514	Chromosome_5A	586	2	23	52.04778156996587	0.6334837375446513	0.3069367710251688	23	0	0.14104372355430184	15	0	0.43478260869565216	8	0	0.7585335018963337	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011480	Chromosome_5A	321	1	14	54.82866043613707	0.6358234295415959	0.12195121951219512	14	0	0.12195121951219512	14	0	NA	NA	NA	0.3719200371920037	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011506	Chromosome_5A	4045	4	121	38.51668726823239	0.8111989525324848	0.6705130204272571	121	0	0.6701030927835051	58	0	0.6711409395973155	63	0	1.710914454277286	57	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN011505	Chromosome_5A	7732	5	239	37.325400931195034	0.8896306965888827	0.9247448979591837	238	0	0.5270457697642164	63	0	1.0851325651638886	175	0	0.528052805280528	62	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN011504	Chromosome_5A	1026	1	37	40.058479532163744	0.9390955867801306	0.3968253968253968	37	0	0.3968253968253968	37	0	NA	NA	NA	0.5249343832020997	57	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN011503	Chromosome_5A	978	1	32	43.66053169734151	0.692358745188266	0.6233303650934996	32	0	0.6233303650934996	32	0	NA	NA	NA	0.6649778340721976	64	0	unmethylated (<10%)	P0C7U4	C3a anaphylatoxin chemotactic receptor (C3AR) (C3a-R)	complement receptor mediated signaling pathway [GO:0002430]; inflammatory response [GO:0006954]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN011502	Chromosome_5A	29583	15	566	34.168272318561336	0.6555336208852722	10.963810183981746	537	0.06890130353817504	0.7674943566591422	126	0	13.38551719207949	411	0.09002433090024331	0.5535055350553506	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011523	Chromosome_5A	711	1	16	39.09985935302391	0.5966955153422502	31.57894736842105	3	0	31.57894736842105	3	0	NA	NA	NA	1.3646702047005308	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011522	Chromosome_5A	5064	5	47	33.333333333333336	0.3346663291993588	42.48006076718572	42	0.5238095238095238	41.71208720743828	27	0.5555555555555556	43.59571495109455	15	0.4666666666666667	38.292682926829265	26	0.2692307692307692	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011501	Chromosome_5A	13555	8	351	37.89745481372187	0.7224994768573538	3.7538273116962646	351	0.014245014245014245	4.138169257340242	324	0.015432098765432098	0.7547169811320755	27	0	0.6034193764666443	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011500	Chromosome_5A	19537	5	373	37.25751138864718	0.5504708911352995	81.50388486207436	331	0.9305135951661632	51.40350877192982	25	0.72	83.40633142983866	306	0.9477124183006536	24.38031816500185	40	0.225	methylated (>=50%)	Q7SIG4	Diisopropyl-fluorophosphatase (DFPase) (EC 3.8.2.2)	NA	hit, no GO BP
GN011499	Chromosome_5A	8358	16	166	38.19095477386934	0.5467455229562281	95.39451016423567	166	1	96.321608040201	109	1	94.15862808145766	57	1	97.15189873417721	8	1	methylated (>=50%)	Q6QI06	Rapamycin-insensitive companion of mTOR (AVO3 homolog) (mAVO3) (Protein pianissimo)	actin cytoskeleton organization [GO:0030036]; cellular response to nutrient levels [GO:0031669]; cGAS/STING signaling pathway [GO:0140896]; cytoskeleton organization [GO:0007010]; embryo development ending in birth or egg hatching [GO:0009792]; lipid biosynthetic process [GO:0008610]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cGAS/STING signaling pathway [GO:0160049]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of cell growth [GO:0030307]; positive regulation of cell migration [GO:0030335]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of TOR signaling [GO:0032008]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of establishment of cell polarity [GO:2000114]; regulation of gene expression [GO:0010468]; regulation of inflammatory response [GO:0050727]; regulation of peptidyl-serine phosphorylation [GO:0033135]; regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051896]; regulation of phosphorylation [GO:0042325]; regulation of protein phosphorylation [GO:0001932]; TORC2 signaling [GO:0038203]	hit with GO BP
GN011498	Chromosome_5A	7602	4	140	35.64851354906604	0.5798955590814778	80.30109359465985	139	0.8201438848920863	77.32049036777583	23	0.7391304347826086	80.8781149347347	116	0.8362068965517241	24.94331065759637	26	0.3076923076923077	methylated (>=50%)	Q9D3D9	ATP synthase F(1) complex subunit delta, mitochondrial (ATP synthase F1 subunit delta) (F-ATPase delta subunit)	aerobic respiration [GO:0009060]; mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]; proton motive force-driven ATP synthesis [GO:0015986]; proton motive force-driven mitochondrial ATP synthesis [GO:0042776]; proton transmembrane transport [GO:1902600]	hit with GO BP
GN011497	Chromosome_5A	9048	8	119	40.683023872679044	0.3278582299202394	76.13657450361848	101	0.9603960396039604	84.86055776892431	24	0.9583333333333334	74.13911060433296	77	0.961038961038961	37.06846108835576	72	0.4166666666666667	methylated (>=50%)	Q09621	Beta-lactamase domain-containing protein 2	NA	hit, no GO BP
GN011496	Chromosome_5A	11548	22	135	37.33113959127122	0.3357393165043726	85.25873314973184	135	0.9185185185185185	83.91188251001336	95	0.8947368421052632	87.77546777546777	40	0.975	29.13063268092854	36	0.3611111111111111	methylated (>=50%)	Q03468	DNA excision repair protein ERCC-6 (EC 3.6.4.-) (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB)	base-excision repair [GO:0006284]; chromatin remodeling [GO:0006338]; DNA damage checkpoint signaling [GO:0000077]; DNA protection [GO:0042262]; DNA repair [GO:0006281]; double-strand break repair via classical nonhomologous end joining [GO:0097680]; negative regulation of double-strand break repair via nonhomologous end joining [GO:2001033]; neurogenesis [GO:0022008]; neuron differentiation [GO:0030182]; neuron projection development [GO:0031175]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription by RNA polymerase III [GO:0045945]; protein localization to chromatin [GO:0071168]; regulation of DNA-templated transcription elongation [GO:0032784]; regulation of transcription elongation by RNA polymerase II [GO:0034243]; response to oxidative stress [GO:0006979]; single strand break repair [GO:0000012]; transcription by RNA polymerase II [GO:0006366]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN011495	Chromosome_5A	12738	18	188	35.766996388758045	0.462387646616206	81.47393179145433	188	0.9148936170212766	72.0348204570185	35	0.8571428571428571	83.06311257671521	153	0.9281045751633987	36.99296917252569	35	0.42857142857142855	methylated (>=50%)	Q8VBT9	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog)	glucose homeostasis [GO:0042593]; intracellular protein transport [GO:0006886]; peptidyl-lysine trimethylation [GO:0018023]; positive regulation of protein modification process [GO:0031401]; regulation of D-glucose import across plasma membrane [GO:0046324]	hit with GO BP
GN011494	Chromosome_5A	29213	23	308	36.442679628932325	0.3185836108109333	75.89212158001995	305	0.9180327868852459	89.8936170212766	71	1	73.32615053101432	234	0.8931623931623932	9.239815203695926	41	0.14634146341463414	methylated (>=50%)	Q95JP0	Dynein axonemal intermediate chain 3 (WD repeat-containing protein 63)	cilium movement involved in cell motility [GO:0060294]; inner dynein arm assembly [GO:0036159]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; negative regulation of cell migration [GO:0030336]; positive regulation of osteoblast differentiation [GO:0045669]	hit with GO BP
GN011493	Chromosome_5A	9842	4	175	36.58809185124974	0.5325520446832299	84.03055333510969	149	0.9194630872483222	86.89427312775331	18	0.8888888888888888	83.77934499082214	131	0.9236641221374046	62.585456805469235	28	0.5357142857142857	methylated (>=50%)	Q6NY34	Histone chaperone asf1b-B (Anti-silencing function protein 1 homolog Bb)	DNA replication-dependent chromatin assembly [GO:0006335]	hit with GO BP
GN011492	Chromosome_5A	438	1	6	39.954337899543376	0.3504	85.78199052132702	6	1	85.78199052132702	6	1	NA	NA	NA	57.48148148148148	48	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011491	Chromosome_5A	7119	6	95	35.66512150582947	0.42008922248973235	89.76704055220017	95	1	85.19764507989908	21	1	90.94659140251845	74	1	87.58064516129032	24	1	methylated (>=50%)	Q9VR50	Solute carrier family 35 member E1 homolog	transmembrane transport [GO:0055085]	hit with GO BP
GN002639	Chromosome_5A	372	1	9	45.43010752688172	0.4777397260273973	0.9803921568627451	9	0	0.9803921568627451	9	0	NA	NA	NA	5.498766302432147	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002638	Chromosome_5A	273	1	7	46.52014652014652	0.48063380281690143	0	7	0	0	7	0	NA	NA	NA	6.093189964157706	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002637	Chromosome_5A	796	2	14	37.06030150753769	0.5267536396294196	6.818181818181818	14	0	8.571428571428571	6	0	1.675977653631285	8	0	0.41103934233705225	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001238	Chromosome_5A	970	3	25	42.16494845360825	0.5808661492766121	19.324577861163228	16	0.1875	22.811671087533156	15	0.2	10.897435897435898	1	0	10.753676470588236	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011564	Chromosome_5A	8961	4	252	37.18335007253655	0.814135018587039	1.5575501583949314	243	0	0.6140350877192983	83	0	1.7943637164244826	160	0	1.194267515923567	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011565	Chromosome_5A	20308	14	349	37.448296237935786	0.49393237798514944	86.05802806171037	304	0.9967105263157895	93.70125974805039	32	1	85.15336552115876	272	0.9963235294117647	33.57041251778094	37	0.43243243243243246	methylated (>=50%)	Q5F1R6	DnaJ homolog subfamily C member 21 (DnaJ homolog subfamily A member 5) (Protein GS3)	protein folding [GO:0006457]	hit with GO BP
GN011568	Chromosome_5A	29435	18	370	36.18481399694242	0.38639836047985565	59.849586362496865	367	0.6049046321525886	70.57057057057057	66	0.696969696969697	57.9537408543781	301	0.584717607973422	38.24768323504634	14	0.2857142857142857	methylated (>=50%)	Q63787	Phosphatidylinositol 3-kinase regulatory subunit alpha (PI3-kinase regulatory subunit alpha) (PI3K regulatory subunit alpha) (PtdIns-3-kinase regulatory subunit alpha) (Phosphatidylinositol 3-kinase 85 kDa regulatory subunit alpha) (PI3-kinase subunit p85-alpha) (PtdIns-3-kinase regulatory subunit p85-alpha)	B cell differentiation [GO:0030183]; cellular response to fatty acid [GO:0071398]; cellular response to insulin stimulus [GO:0032869]; cellular response to UV [GO:0034644]; cytokine-mediated signaling pathway [GO:0019221]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; glucose metabolic process [GO:0006006]; growth hormone receptor signaling pathway [GO:0060396]; insulin receptor signaling pathway [GO:0008286]; insulin-like growth factor receptor signaling pathway [GO:0048009]; interleukin-18-mediated signaling pathway [GO:0035655]; intracellular glucose homeostasis [GO:0001678]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; natural killer cell mediated cytotoxicity [GO:0042267]; negative regulation of apoptotic process [GO:0043066]; negative regulation of blood pressure [GO:0045776]; negative regulation of cell adhesion [GO:0007162]; negative regulation of cell-cell adhesion [GO:0022408]; negative regulation of cell-matrix adhesion [GO:0001953]; negative regulation of heart rate [GO:0010459]; negative regulation of muscle cell apoptotic process [GO:0010656]; negative regulation of osteoclast differentiation [GO:0045671]; negative regulation of proteolysis [GO:0045861]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of stress fiber assembly [GO:0051497]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; phosphatidylinositol metabolic process [GO:0046488]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; positive regulation of cell migration [GO:0030335]; positive regulation of endoplasmic reticulum unfolded protein response [GO:1900103]; positive regulation of filopodium assembly [GO:0051491]; positive regulation of focal adhesion disassembly [GO:0120183]; positive regulation of gene expression [GO:0010628]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of RNA splicing [GO:0033120]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of synapse assembly [GO:0051965]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; protein import into nucleus [GO:0006606]; protein phosphorylation [GO:0006468]; protein polyubiquitination [GO:0000209]; protein stabilization [GO:0050821]; regulation of protein localization to plasma membrane [GO:1903076]; regulation of stress fiber assembly [GO:0051492]; regulation of toll-like receptor 4 signaling pathway [GO:0034143]; response to amino acid [GO:0043200]; response to cAMP [GO:0051591]; response to dexamethasone [GO:0071548]; response to endoplasmic reticulum stress [GO:0034976]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to fatty acid [GO:0070542]; response to fructose [GO:0009750]; response to glucocorticoid [GO:0051384]; response to growth factor [GO:0070848]; response to insulin [GO:0032868]; response to iron(II) ion [GO:0010040]; response to nutrient [GO:0007584]; response to progesterone [GO:0032570]; response to testosterone [GO:0033574]; response to xenobiotic stimulus [GO:0009410]; response to yeast [GO:0001878]; T follicular helper cell differentiation [GO:0061470]	hit with GO BP
GN011569	Chromosome_5A	12997	9	126	36.06216819265985	0.30438493545289663	90.25185518326963	124	0.9758064516129032	95.45726240286909	33	1	89.04583852651987	91	0.967032967032967	79.34560327198363	41	0.7560975609756098	methylated (>=50%)	Q8R059	UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-N-acetylglucosamine 4-epimerase) (UDP-GlcNAc 4-epimerase) (EC 5.1.3.7) (UDP-galactosamine 4-epimerase) (UDP-GalNAc 4-epimerase) (UDP-galactose 4-epimerase)	galactose catabolic process [GO:0019388]; galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; galactose metabolic process [GO:0006012]; glycolytic process from galactose [GO:0061623]	hit with GO BP
GN011570	Chromosome_5A	10212	8	165	35.330983157070115	0.5224460688179711	84.75655998786591	165	0.9393939393939394	79.43037974683544	8	0.875	85.0246933248367	157	0.9426751592356688	39.651898734177216	59	0.3898305084745763	methylated (>=50%)	Q3T1J8	Replication termination factor 2 (RTF2) (Replication termination factor 2 domain-containing protein 1)	cellular response to hydroxyurea [GO:0072711]; regulation of DNA stability [GO:0097752]	hit with GO BP
GN011571	Chromosome_5A	25555	7	199	34.721189591078065	0.26424828331588285	81.37358613394092	196	0.9285714285714286	55.65217391304348	10	0.7	82.63616185760628	186	0.9408602150537635	7.125662012518055	21	0	methylated (>=50%)	Q5ZML7	Lysosomal-associated transmembrane protein 4A	regulation of lysosomal membrane permeability [GO:0097213]	hit with GO BP
GN011572	Chromosome_5A	804	1	32	42.91044776119403	0.8699533373909515	79.41176470588235	32	1	79.41176470588235	32	1	NA	NA	NA	88.58490566037736	59	0.9830508474576272	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011573	Chromosome_5A	8330	7	78	32.82112845138055	0.34846210406238787	86.2753654811259	76	0.9868421052631579	93.47319347319348	8	1	85.53201733269138	68	0.9852941176470589	87.91105543376135	60	0.9833333333333333	methylated (>=50%)	A6QLH5	ERI1 exoribonuclease 3 (EC 3.1.-.-) (Prion interactor 1) (Prion protein-interacting protein)	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; negative regulation of regulatory ncRNA-mediated heterochromatin formation [GO:0060906]	hit with GO BP
GN011574	Chromosome_5A	3969	4	52	39.45578231292517	0.33958799526128736	66.92821854112177	49	0.8571428571428571	89.18590522478736	22	0.9545454545454546	59.93124522536287	27	0.7777777777777778	59.57607872823618	22	0.8181818181818182	methylated (>=50%)	Q82WE9	tRNA 2-selenouridine synthase (EC 2.9.1.3)	tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN011575	Chromosome_5A	10286	4	137	36.58370600816644	0.4064074300948373	82.90133180581412	135	0.9777777777777777	91.74147217235189	24	1	81.22337706593969	111	0.972972972972973	70.06145741878841	23	0.8260869565217391	methylated (>=50%)	P25228	Ras-related protein Rab-3	cytoskeletal matrix organization at active zone [GO:0048789]; exocytosis [GO:0006887]; maintenance of presynaptic active zone structure [GO:0048790]; neurotransmitter secretion [GO:0007269]; Rab protein signal transduction [GO:0032482]; regulation of neurotransmitter secretion [GO:0046928]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; regulation of synaptic vesicle fusion to presynaptic active zone membrane [GO:0031630]; symbiont entry into host cell [GO:0046718]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN011576	Chromosome_5A	10066	8	162	35.24736737532287	0.5200885880388287	84.51869359690589	162	0.9814814814814815	90.49586776859505	68	1	81.80824484697064	94	0.9680851063829787	8.357113738279658	33	0.12121212121212122	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011577	Chromosome_5A	13409	21	250	37.40771123872026	0.5372291938573256	87.47864834756777	249	0.9357429718875502	82.55604225715022	75	0.88	89.4720367278798	174	0.9597701149425287	40.270880361173816	42	0.6904761904761905	methylated (>=50%)	Q8BFY9	Transportin-1 (Importin beta-2) (Karyopherin beta-2)	protein import into nucleus [GO:0006606]	hit with GO BP
GN011578	Chromosome_5A	12517	26	394	38.51561875848846	0.8488102675843742	1.162076093636516	394	0	1.0081696506170694	150	0	1.234974477194138	244	0	0.5059523809523809	51	0	unmethylated (<10%)	Q7Z020	Transient receptor potential cation channel subfamily A member 1 (dTRPA1) (Ankyrin-like with transmembrane domains protein 1) (dANKTM1)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transport [GO:0006816]; cellular response to heat [GO:0034605]; cellular response to pulsatile fluid shear stress [GO:0097703]; detection of chemical stimulus involved in sensory perception of bitter taste [GO:0001580]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of hot stimulus involved in thermoception [GO:0120168]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; detection of temperature stimulus involved in thermoception [GO:0050960]; mechanosensory behavior [GO:0007638]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; negative phototaxis [GO:0046957]; neuronal signal transduction [GO:0023041]; phototransduction [GO:0007602]; positive regulation of calcium-mediated signaling [GO:0050850]; response to heat [GO:0009408]; response to light stimulus [GO:0009416]; temperature compensation of the circadian clock [GO:0010378]; thermoception [GO:0050955]; thermosensory behavior [GO:0040040]; thermotaxis [GO:0043052]	hit with GO BP
GN011615	Chromosome_5A	2076	2	76	37.716763005780344	1.0298694516971278	0.38372985418265543	76	0	0.32362459546925565	26	0	0.4024144869215292	50	0	0.6937561942517344	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011614	Chromosome_5A	19528	8	526	36.65505940188447	0.8037561571488187	1.2921009561547077	511	0	0.6602336211274759	122	0	1.4211618257261411	389	0	0.8378870673952641	65	0	unmethylated (<10%)	Q8TCU5	Glutamate receptor ionotropic, NMDA 3A (GluN3A) (N-methyl-D-aspartate receptor subtype 3A) (NMDAR3A) (NR3A) (NMDAR-L)	calcium ion transport [GO:0006816]; hippocampus development [GO:0021766]; ionotropic glutamate receptor signaling pathway [GO:0035235]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic cation transmembrane transport [GO:0098655]; negative regulation of dendritic spine development [GO:0061000]; negative regulation of dendritic spine maintenance [GO:1902951]; neuron development [GO:0048666]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of synaptic plasticity [GO:0048167]; response to ethanol [GO:0045471]; rhythmic process [GO:0048511]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN011613	Chromosome_5A	6794	8	229	38.41624963202826	0.914963562029235	3.311953352769679	227	0	0.5491488193300385	125	0	5.351712953577945	102	0	0.4424778761061947	62	0	unmethylated (<10%)	Q8TCU5	Glutamate receptor ionotropic, NMDA 3A (GluN3A) (N-methyl-D-aspartate receptor subtype 3A) (NMDAR3A) (NR3A) (NMDAR-L)	calcium ion transport [GO:0006816]; hippocampus development [GO:0021766]; ionotropic glutamate receptor signaling pathway [GO:0035235]; modulation of chemical synaptic transmission [GO:0050804]; monoatomic cation transmembrane transport [GO:0098655]; negative regulation of dendritic spine development [GO:0061000]; negative regulation of dendritic spine maintenance [GO:1902951]; neuron development [GO:0048666]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of synaptic plasticity [GO:0048167]; response to ethanol [GO:0045471]; rhythmic process [GO:0048511]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN011612	Chromosome_5A	30095	22	411	36.61405549094534	0.41305008443636015	82.92283056275735	408	0.9436274509803921	91.60349854227405	63	1	81.61680849197298	345	0.9333333333333333	63.02294197031039	21	0.6666666666666666	methylated (>=50%)	P54802	Alpha-N-acetylglucosaminidase (EC 3.2.1.50) (N-acetyl-alpha-glucosaminidase) (NAG) [Cleaved into: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form]	heparan sulfate proteoglycan catabolic process [GO:0030200]; heparin proteoglycan metabolic process [GO:0030202]; nervous system development [GO:0007399]	hit with GO BP
GN011611	Chromosome_5A	26879	14	315	35.77142006771085	0.37017837969756273	69.30514299027317	309	0.7411003236245954	83.3831217326363	57	0.8947368421052632	66.70347112000552	252	0.7063492063492064	30.453172205438065	23	0.30434782608695654	methylated (>=50%)	Q13946	High affinity 3',5'-cyclic-AMP phosphodiesterase 7A (EC 3.1.4.53) (HCP1) (TM22) (cAMP-specific phosphodiesterase 7A)	cAMP catabolic process [GO:0006198]; negative regulation of cAMP/PKA signal transduction [GO:0141162]; signal transduction [GO:0007165]	hit with GO BP
GN011610	Chromosome_5A	2611	4	24	35.46533895059364	0.2935508200253901	88.15602836879432	24	0.9583333333333334	92.2554347826087	12	1	83.67952522255193	12	0.9166666666666666	24.656155652465614	48	0.22916666666666666	methylated (>=50%)	Q9CQ19	Myosin regulatory light polypeptide 9 (Myosin regulatory light chain 2, smooth muscle isoform) (Myosin regulatory light chain 9)	myofibril assembly [GO:0030239]; stress fiber assembly [GO:0043149]; vascular associated smooth muscle contraction [GO:0014829]	hit with GO BP
GN011609	Chromosome_5A	19305	11	205	31.59285159285159	0.4487043721840648	84.27152317880795	205	0.9951219512195122	91.66666666666667	36	1	83.05705474171164	169	0.9940828402366864	88.35942818243703	33	0.9090909090909091	methylated (>=50%)	D3ZGQ5	Serine/threonine-protein kinase Nek8 (EC 2.7.11.1) (Never in mitosis A-related kinase 8) (NimA-related protein kinase 8)	animal organ morphogenesis [GO:0009887]; determination of left/right symmetry [GO:0007368]; heart development [GO:0007507]; regulation of hippo signaling [GO:0035330]	hit with GO BP
GN011608	Chromosome_5A	3493	3	41	35.27054108216433	0.37773915153561294	54.98442367601246	41	0.6097560975609756	33.624454148471614	12	0.25	62.78575225943647	29	0.7586206896551724	0.7172131147540983	63	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011607	Chromosome_5A	879	1	20	38.56655290102389	0.6123301985370951	86.4963503649635	20	1	86.4963503649635	20	1	NA	NA	NA	82.90441176470588	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011606	Chromosome_5A	2534	2	32	39.14759273875296	0.3337078328003918	97.69512833944474	32	1	97.69512833944474	32	1	NA	NA	NA	20.96069868995633	39	0.23076923076923078	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011605	Chromosome_5A	27239	17	340	34.67454752377106	0.42165895764060457	73.22570546934395	307	0.8241042345276873	78.76182287188306	25	0.88	72.92197377111049	282	0.8191489361702128	71.65742452248922	23	0.7391304347826086	methylated (>=50%)	Q5VV43	Dyslexia-associated protein KIAA0319	negative regulation of axon extension [GO:0030517]; negative regulation of axon extension involved in regeneration [GO:0048692]; negative regulation of dendrite development [GO:2000171]; neuron migration [GO:0001764]; positive regulation of SMAD protein signal transduction [GO:0060391]	hit with GO BP
GN011604	Chromosome_5A	6562	13	223	39.08869247180738	0.8897784015040776	0.5668398677373642	223	0	0.5678233438485805	83	0	0.5662514156285391	140	0	4.865269461077844	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011603	Chromosome_5A	26809	10	405	35.126263568204706	0.4898782555432543	70.68680836114527	403	0.8064516129032258	72.20756376429199	35	0.7428571428571429	70.55477072276736	368	0.8125	31.923809523809524	46	0.43478260869565216	methylated (>=50%)	Q7ZW86	Spliceosome-associated protein CWC27 homolog (Probable inactive peptidyl-prolyl cis-trans isomerase CWC27 homolog) (PPIase CWC27)	protein folding [GO:0006457]	hit with GO BP
GN011602	Chromosome_5A	639	1	19	48.5133020344288	0.5074608150470219	92.9192546583851	19	1	92.9192546583851	19	1	NA	NA	NA	28.205128205128204	55	0.3090909090909091	methylated (>=50%)	Q08DV5	E3 ubiquitin-protein ligase RNF220 (EC 2.3.2.27) (RING finger protein 220) (RING-type E3 ubiquitin transferase RNF220)	positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of myelination [GO:0031643]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein autoubiquitination [GO:0051865]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]	hit with GO BP
GN011601	Chromosome_5A	3007	3	71	37.81177253076156	0.6610182610795649	0.5676126878130217	71	0	0.576036866359447	29	0	0.5641748942172073	42	0	1.0047846889952152	26	0	unmethylated (<10%)	B4E2M5	Ankyrin repeat domain-containing protein 66	NA	hit, no GO BP
GN002114	Chromosome_5A	552	1	3	37.31884057971015	0.16953316953316952	52.46913580246913	3	0.6666666666666666	52.46913580246913	3	0.6666666666666666	NA	NA	NA	16.071428571428573	7	0.14285714285714285	NA	NA	NA	NA	no Swiss-Prot hit
GN011600	Chromosome_5A	396	1	16	41.41414141414141	0.9513513513513514	0.21953896816684962	16	0	0.21953896816684962	16	0	NA	NA	NA	0.33100404560500185	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011599	Chromosome_5A	6096	2	74	36.51574803149607	0.3642847452371262	70.6984667802385	74	0.7702702702702703	85.50247116968698	38	0.9473684210526315	58.91608391608391	36	0.5833333333333334	52.20397579948142	16	0.6875	methylated (>=50%)	Q7RTX9	Monocarboxylate transporter 14 (MCT 14) (Solute carrier family 16 member 14)	carboxylic acid transmembrane transport [GO:1905039]	hit with GO BP
GN011598	Chromosome_5A	246	1	2	56.09756097560975	0.1033396345305608	0	1	0	0	1	0	NA	NA	NA	0.46958855098389984	87	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011597	Chromosome_5A	3369	2	89	36.420302760463045	0.8012425845759179	0.3816793893129771	89	0	0.5296610169491526	19	0	0.33866995073891626	70	0	1.2332990750256938	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011619	Chromosome_5A	542	1	5	35.79335793357934	0.28829787234042553	0	5	0	0	5	0	NA	NA	NA	2.3923444976076556	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011620	Chromosome_5A	1581	3	9	29.601518026565465	0.263368315842079	0.40522287257991896	9	0	0.34782608695652173	5	0	0.4668534080298786	4	0	0.764748725418791	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011616	Chromosome_5A	543	1	5	35.35911602209945	0.29472427268779855	2.5559105431309903	5	0	2.5559105431309903	5	0	NA	NA	NA	0.9918845807033363	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011596	Chromosome_5A	543	1	5	35.72744014732965	0.28882978723404257	8.285714285714286	5	0	8.285714285714286	5	0	NA	NA	NA	7.0735090152565885	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011595	Chromosome_5A	546	1	40	50.91575091575091	1.322674418604651	0.6280193236714976	40	0	0.6280193236714976	40	0	NA	NA	NA	0.3453038674033149	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011594	Chromosome_5A	642	1	40	44.23676012461059	1.2758346581875994	0.9426551453260016	37	0	0.9426551453260016	37	0	NA	NA	NA	0.48470160557406844	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011593	Chromosome_5A	504	1	41	51.19047619047619	1.4612827947104166	0.5558643690939411	29	0	0.5558643690939411	29	0	NA	NA	NA	0.2603036876355748	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011592	Chromosome_5A	642	1	40	44.0809968847352	1.2852852852852852	0.7575757575757576	32	0	0.7575757575757576	32	0	NA	NA	NA	0.4921562596124269	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011591	Chromosome_5A	546	1	41	50.73260073260073	1.3716911764705881	0.5657708628005658	39	0	0.5657708628005658	39	0	NA	NA	NA	0.42238648363252373	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011590	Chromosome_5A	5549	2	174	39.322400432510364	0.8214467111963022	0.6144564853089041	156	0	0.6620428751576293	65	0	0.6042090970807875	91	0	0.8248102936324645	67	0	unmethylated (<10%)	Q7TM99	Monocarboxylate transporter 9 (MCT 9) (Solute carrier family 16 member 9)	carboxylic acid transmembrane transport [GO:1905039]; carnitine transmembrane transport [GO:1902603]; creatine transmembrane transport [GO:0015881]; urate metabolic process [GO:0046415]	hit with GO BP
GN011589	Chromosome_5A	14592	9	210	36.10197368421053	0.44469295373136647	81.45284751990202	204	0.9313725490196079	71.04029990627929	23	0.782608695652174	82.37892806534967	181	0.9502762430939227	49.51162007409902	43	0.6046511627906976	methylated (>=50%)	Q5HZL1	ERI1 exoribonuclease 2 (EC 3.1.-.-) (Exonuclease domain-containing protein 1)	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; negative regulation of regulatory ncRNA-mediated heterochromatin formation [GO:0060906]	hit with GO BP
GN011588	Chromosome_5A	10572	6	159	35.42376087779039	0.48041553084843264	88.51904398122886	156	0.9935897435897436	92.80185758513932	23	1	87.81603354084615	133	0.9924812030075187	70.94594594594595	34	0.7352941176470589	methylated (>=50%)	Q17QK9	N-alpha-acetyltransferase 60 (EC 2.3.1.259) (Histone acetyltransferase type B protein 4) (HAT4) (EC 2.3.1.48) (N-acetyltransferase 15) (N-alpha-acetyltransferase F) (NatF)	cell population proliferation [GO:0008283]; chromosome segregation [GO:0007059]; N-terminal peptidyl-methionine acetylation [GO:0017196]; N-terminal protein amino acid acetylation [GO:0006474]; nucleosome assembly [GO:0006334]	hit with GO BP
GN011587	Chromosome_5A	10059	6	171	35.69937369519833	0.5429765825054421	89.0806014296278	142	0.9859154929577465	88.13186813186813	17	1	89.20044419766796	125	0.984	90.75342465753425	14	1	methylated (>=50%)	A4QN59	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 (Diphthamide biosynthesis protein 2) (Diphtheria toxin resistance protein 2) (S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase 2)	protein histidyl modification to diphthamide [GO:0017183]	hit with GO BP
GN011586	Chromosome_5A	4218	3	62	36.98435277382646	0.4300012331976816	92.67542633491753	60	1	93.08208569953537	37	1	92.1951219512195	23	1	85.25052928722654	23	0.9565217391304348	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011585	Chromosome_5A	1096	3	10	35.4014598540146	0.29121828085558654	60.721442885771545	10	0.7	58.19672131147541	8	0.625	67.66917293233082	2	1	7.526595744680851	56	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011584	Chromosome_5A	1386	1	37	43.57864357864358	0.5645124005151745	95.03239740820734	37	1	95.03239740820734	37	1	NA	NA	NA	65.36082474226804	22	0.7727272727272727	methylated (>=50%)	P52187	ATP-sensitive inward rectifier potassium channel 12 (Inward rectifier K(+) channel Kir2.2) (IRK-2) (Potassium channel, inwardly rectifying subfamily J member 12)	potassium ion import across plasma membrane [GO:1990573]; potassium ion transport [GO:0006813]; protein homotetramerization [GO:0051289]	hit with GO BP
GN011583	Chromosome_5A	19355	22	570	37.9746835443038	0.8191771362380825	0.7291811806232874	567	0	0.7761816496756255	238	0	0.6977285060857431	329	0	0.3979739507959479	43	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN011582	Chromosome_5A	2997	7	36	33.5669002335669	0.42957477305303393	53.24036095159967	35	0.5428571428571428	19.134078212290504	14	0.21428571428571427	67.42160278745645	21	0.7619047619047619	0.5235602094240838	43	0	methylated (>=50%)	Q8N0W5	IQ domain-containing protein K	NA	hit, no GO BP
GN011581	Chromosome_5A	13235	18	430	37.211938043067626	0.9394188298750721	0.9601589228561969	419	0	0.6608969315499607	133	0	1.121781252655732	286	0	0.4206098843322818	44	0	unmethylated (<10%)	Q8JI28	Tolloid-like protein 1 (EC 3.4.24.-) (Metalloprotease xolloid-like) (Xenopus tolloid-like protein 1) (Xlr)	proteolysis [GO:0006508]	hit with GO BP
GN011580	Chromosome_5A	2739	3	69	36.07155896312523	0.7750615157480315	0.7898516036381044	69	0	1.0869565217391304	14	0	0.7059545733578882	55	0	0.5989911727616646	57	0	unmethylated (<10%)	Q9BLG0	Troponin C (TN-C)	NA	hit, no GO BP
GN011579	Chromosome_5A	9702	6	266	35.487528344671205	0.8710767099651263	0.686116948943009	266	0	0.8620689655172413	25	0	0.6710508656556167	241	0	0.5118659841786878	40	0	unmethylated (<10%)	P62147	Calmodulin-1 (CaM 1)	NA	hit, no GO BP
GN011560	Chromosome_5A	1929	1	70	41.05754276827372	0.8682484567901234	1.2076172782164423	70	0	1.2076172782164423	70	0	NA	NA	NA	11.40304781923279	34	0	unmethylated (<10%)	Q8C0T1	Protein fem-1 homolog A-like (FEM1-alpha-B) (Protein fem-1 homolog A-B) (FEM1a-B)	MAPK cascade [GO:0000165]; negative regulation of inflammatory response [GO:0050728]; positive regulation of inflammatory response [GO:0050729]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN011561	Chromosome_5A	15611	8	338	36.42944077893793	0.6528485703327023	87.97359804583961	337	0.9436201780415431	87.94402583423036	38	0.9210526315789473	87.97675890237589	299	0.9464882943143813	0.8777852802160703	47	0	methylated (>=50%)	Q8BG81	Polymerase delta-interacting protein 3 (S6K1 Aly/REF-like target) (SKAR)	poly(A)+ mRNA export from nucleus [GO:0016973]; positive regulation of translation [GO:0045727]	hit with GO BP
GN011562	Chromosome_5A	8168	6	142	35.12487757100882	0.5647134891746564	81.27677358687703	142	0.9084507042253521	70.41884816753927	16	0.6875	82.2186896786647	126	0.9365079365079365	0.9471585244267199	54	0	methylated (>=50%)	Q9D6D0	Mitochondrial uncoupling protein 4 (UCP 4) (Solute carrier family 25, member 27)	inner ear development [GO:0048839]; intracellular triglyceride homeostasis [GO:0035356]; negative regulation of apoptotic process [GO:0043066]; negative regulation of mitochondrial calcium ion concentration [GO:0051562]; negative regulation of mitochondrial membrane potential [GO:0010917]; negative regulation of neuron apoptotic process [GO:0043524]; positive regulation of cell population proliferation [GO:0008284]; regulation of D-glucose import across plasma membrane [GO:0046324]; response to cold [GO:0009409]	hit with GO BP
GN011563	Chromosome_5A	1448	2	23	37.5	0.4561566908642652	90.31607262945528	23	1	94.5364238410596	10	1	87.42921857304643	13	1	94.36670254754216	35	1	methylated (>=50%)	Q6YKA8	Protein E(sev)2B (Downstream of receptor kinase) (Protein enhancer of sevenless 2B) (SH2-SH3 adapter protein drk)	epidermal growth factor receptor signaling pathway [GO:0007173]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; follicle cell of egg chamber development [GO:0030707]; imaginal disc-derived wing morphogenesis [GO:0007476]; insulin receptor signaling pathway [GO:0008286]; olfactory learning [GO:0008355]; positive regulation of cell size [GO:0045793]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of receptor-mediated endocytosis [GO:0048260]; positive regulation of TORC1 signaling [GO:1904263]; Ras protein signal transduction [GO:0007265]; sensory perception of sound [GO:0007605]; sevenless signaling pathway [GO:0045500]; short-term memory [GO:0007614]; torso signaling pathway [GO:0008293]; tracheal outgrowth, open tracheal system [GO:0007426]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]	hit with GO BP
GN011545	Chromosome_5A	228	1	11	48.68421052631579	0.817470664928292	5.357142857142857	11	0	5.357142857142857	11	0	NA	NA	NA	3.496932515337423	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011546	Chromosome_5A	558	1	36	46.774193548387096	1.1803972264660947	1.0554089709762533	33	0	1.0554089709762533	33	0	NA	NA	NA	0.21798365122615804	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011547	Chromosome_5A	700	3	11	36.857142857142854	0.46274038461538464	0	5	0	0	5	0	NA	NA	NA	0.7862759113652609	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011548	Chromosome_5A	381	1	11	55.118110236220474	0.38605379513633015	1.2903225806451613	8	0	1.2903225806451613	8	0	NA	NA	NA	5.29391543485734	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011549	Chromosome_5A	10335	2	295	36.03289791969037	0.8837473618670546	1.50650789255054	294	0	0.4973474801061008	42	0	1.7088902187645456	252	0	0.529500756429652	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004347	Chromosome_5A	1363	2	34	42.259721203228175	0.5600377048387877	5.678793256433008	34	0	6.6593886462882095	31	0	1.4218009478672986	3	0	1.3763763763763763	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002053	Chromosome_5A	1734	3	14	35.870818915801614	0.2510834152143559	0.6305170239596469	14	0	0.6993006993006993	9	0	0.5494505494505495	5	0	0.6242197253433208	46	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN011550	Chromosome_5A	1200	2	35	49.416666666666664	0.4794192178617903	0.5706134094151213	35	0	0.48465266558966075	31	0	1.2195121951219512	4	0	0.8720024914356899	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011551	Chromosome_5A	201	1	12	49.75124378109453	0.9682858289843437	0	12	0	0	12	0	NA	NA	NA	0.9673951988534576	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004538	Chromosome_5A	316	1	5	45.25316455696203	0.3338968723584108	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7133303611234953	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011552	Chromosome_5A	222	1	16	53.153153153153156	1.0277777777777777	13.658536585365853	16	0	13.658536585365853	16	0	NA	NA	NA	6.356711321250328	67	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011553	Chromosome_5A	1695	2	45	38.4070796460177	0.7217680122636689	0.3798155181768855	45	0	0.28680688336520077	26	0	0.5018820577164367	19	0	0.24179620034542315	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011554	Chromosome_5A	864	1	20	36.9212962962963	0.6795658329400661	0.4419889502762431	20	0	0.4419889502762431	20	0	NA	NA	NA	0.65865943432778	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011555	Chromosome_5A	1171	2	14	35.439795046968406	0.3812558139534884	73.56164383561644	14	0.8571428571428571	71.78571428571429	8	0.875	74.66666666666667	6	0.8333333333333334	9.287454323995128	58	0.017241379310344827	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011556	Chromosome_5A	531	1	9	43.69114877589454	0.3551839464882943	94.4954128440367	9	1	94.4954128440367	9	1	NA	NA	NA	77.41702741702741	32	0.90625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011540	Chromosome_5A	36336	24	869	35.10292822545134	0.7764588647986628	0.9605931509093888	867	0	0.4670784993219828	142	0	1.0382345272240263	725	0	0.29350104821802936	38	0	unmethylated (<10%)	Q5FWI3	Cell surface hyaluronidase (EC 3.2.1.35) (Cell migration-inducing hyaluronidase 2) (Transmembrane protein 2)	hyaluronan catabolic process [GO:0030214]; regulation of sprouting angiogenesis [GO:1903670]	hit with GO BP
GN011541	Chromosome_5A	666	1	17	39.33933933933934	0.6611386861313868	0.6385696040868455	17	0	0.6385696040868455	17	0	NA	NA	NA	0.6260869565217392	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011542	Chromosome_5A	957	1	30	45.036572622779516	0.6250272129577219	1.078582434514638	30	0	1.078582434514638	30	0	NA	NA	NA	0.574052812858783	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011543	Chromosome_5A	18652	11	545	37.497319322324685	0.8313411255156351	0.7077089727387615	521	0	0.5793742757821553	56	0	0.7209432008284872	465	0	0.5157170923379175	61	0	unmethylated (<10%)	Q95ZJ1	Polypeptide N-acetylgalactosaminyltransferase 5 (pp-GaNTase 5) (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5)	IRE1-mediated unfolded protein response [GO:0036498]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN011544	Chromosome_5A	810	1	32	40.370370370370374	0.9722430607651913	0.27932960893854747	32	0	0.27932960893854747	32	0	NA	NA	NA	0.4214328717639976	56	0	unmethylated (<10%)	Q96PF2	Testis-specific serine/threonine-protein kinase 2 (TSK-2) (TSK2) (TSSK-2) (Testis-specific kinase 2) (EC 2.7.11.1) (DiGeorge syndrome protein G) (DGS-G) (Serine/threonine-protein kinase 22B)	protein autophosphorylation [GO:0046777]; spermatid development [GO:0007286]	hit with GO BP
GN011634	Chromosome_5A	309	1	12	45.30744336569579	0.7573529411764706	0	12	0	0	12	0	NA	NA	NA	0.9298000929800093	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011291	Chromosome_5A	1997	5	25	31.096644967451176	0.5336832428272117	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5803571428571429	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011633	Chromosome_5A	14438	9	167	37.45671145588032	0.33575364888923237	89.12002394492667	152	0.9868421052631579	94.29429429429429	67	1	85.68939771030364	85	0.9764705882352941	87.55458515283843	14	0.9285714285714286	methylated (>=50%)	Q6TFL4	Kelch-like protein 24 (Kainate receptor-interacting protein for GluR6) (KRIP6) (Protein DRE1)	intermediate filament organization [GO:0045109]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein ubiquitination [GO:0016567]	hit with GO BP
GN011632	Chromosome_5A	852	1	23	45.18779342723005	0.5463670328444766	78.10457516339869	23	1	78.10457516339869	23	1	NA	NA	NA	20.01982160555005	24	0.20833333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011631	Chromosome_5A	12023	20	158	34.74174498877152	0.441818297685682	76.35194155483205	158	0.8860759493670886	78.36879432624113	12	0.8333333333333334	76.20669107006044	146	0.8904109589041096	38.05374001452433	26	0.46153846153846156	methylated (>=50%)	Q9NYH9	U3 small nucleolar RNA-associated protein 6 homolog (Hepatocellular carcinoma-associated antigen 66) (Multiple hat domains protein)	maturation of SSU-rRNA [GO:0030490]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN011630	Chromosome_5A	2123	2	40	39.61375412152614	0.48140589569160996	92.8478543563069	40	1	92.72457312546399	37	1	93.717277486911	3	1	59.80392156862745	20	0.7	methylated (>=50%)	Q9Y6B7	AP-4 complex subunit beta-1 (AP-4 adaptor complex subunit beta) (Adaptor-related protein complex 4 subunit beta-1) (Beta subunit of AP-4) (Beta4-adaptin)	endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; intracellular protein transport [GO:0006886]; protein localization to somatodendritic compartment [GO:0061938]; protein targeting [GO:0006605]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN011629	Chromosome_5A	5673	4	89	34.90216816499207	0.5223194888707735	78.47735303565692	89	0.9213483146067416	78.24701195219123	24	0.9166666666666666	78.53550593441963	65	0.9230769230769231	73.29988851727983	25	0.68	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011628	Chromosome_5A	528	1	14	40.34090909090909	0.6947368421052632	0.5252100840336135	14	0	0.5252100840336135	14	0	NA	NA	NA	0.6053268765133172	23	0	unmethylated (<10%)	P27601	Guanine nucleotide-binding protein subunit alpha-13 (G alpha-13) (G protein subunit alpha-13)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; angiogenesis [GO:0001525]; branching involved in blood vessel morphogenesis [GO:0001569]; cell differentiation [GO:0030154]; G protein-coupled receptor signaling pathway [GO:0007186]; in utero embryonic development [GO:0001701]; intracellular signal transduction [GO:0035556]; negative regulation of vascular associated smooth muscle cell migration [GO:1904753]; negative regulation of vascular associated smooth muscle cell proliferation [GO:1904706]; platelet activation [GO:0030168]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of phospholipase activity [GO:0010518]; regulation of blood pressure [GO:0008217]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; regulation of postsynapse assembly [GO:0150052]; Rho protein signal transduction [GO:0007266]; Rho-activating G protein-coupled receptor signaling pathway [GO:0160221]	hit with GO BP
GN011627	Chromosome_5A	1024	2	14	37.890625	0.38095238095238093	0.6589785831960461	14	0	0.40160642570281124	8	0	0.8379888268156425	6	0	1.9261006289308176	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011626	Chromosome_5A	1295	2	23	34.98069498069498	0.5810573546625049	50.96642929806714	19	0.7368421052631579	55.96330275229358	8	0.75	48.47560975609756	11	0.7272727272727273	50.07045561296383	23	0.6086956521739131	methylated (>=50%)	Q8BFR2	Follistatin-related protein 5 (Follistatin-like protein 5) (m-D/Bsp120I 1-2)	cell differentiation [GO:0030154]; regulation of BMP signaling pathway [GO:0030510]	hit with GO BP
GN011625	Chromosome_5A	33085	12	581	34.48390509294242	0.5923837956229934	84.15440227214046	567	0.91005291005291	86.8474923234391	42	0.9761904761904762	84.01131172503807	525	0.9047619047619048	67.20067453625633	39	0.9487179487179487	methylated (>=50%)	Q5E9S4	Ethanolamine-phosphate phospho-lyase (EC 4.2.3.2) (Alanine--glyoxylate aminotransferase 2-like 1)	NA	hit, no GO BP
GN011624	Chromosome_5A	324	1	11	43.51851851851852	0.7232142857142857	81.89910979228486	11	1	81.89910979228486	11	1	NA	NA	NA	69.5104895104895	36	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011623	Chromosome_5A	20353	13	263	35.744116346484546	0.4048897294698546	78.83449461587186	220	0.8545454545454545	79.27927927927928	12	0.8333333333333334	78.80597014925372	208	0.8557692307692307	0.8086253369272237	50	0	methylated (>=50%)	O57383	DNA polymerase beta (EC 2.7.7.7) (5'-deoxyribose-phosphate lyase) (5'-dRP lyase) (EC 4.2.99.-) (AP lyase) (EC 4.2.99.18)	base-excision repair [GO:0006284]; DNA damage response [GO:0006974]; double-strand break repair via nonhomologous end joining [GO:0006303]	hit with GO BP
GN011622	Chromosome_5A	755	4	22	41.72185430463576	0.6699201419698314	0.5192107995846313	22	0	0.546448087431694	17	0	0.4329004329004329	5	0	0.40816326530612246	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011635	Chromosome_5A	9026	11	249	39.009528030135165	0.7312953790708162	14.980694980694981	246	0.17479674796747968	30.24721279689772	47	0.2978723404255319	11.697247706422019	199	0.1457286432160804	0.7818052594171997	47	0	sparse (10-50%)	P48416	Cytochrome P450 10 (EC 1.14.-.-) (CYPX)	NA	hit, no GO BP
GN011636	Chromosome_5A	8941	12	251	36.95336092159714	0.8223950179709533	0.8732593816379514	251	0	0.4581151832460733	66	0	1.0046607975142414	185	0	1.378982406086543	54	0	unmethylated (<10%)	P48416	Cytochrome P450 10 (EC 1.14.-.-) (CYPX)	NA	hit, no GO BP
GN011637	Chromosome_5A	7026	11	176	35.73868488471392	0.7856144506055817	0.742531514418926	175	0	0.4794246903715541	55	0	0.8150677387377464	120	0	0.6055363321799307	47	0	unmethylated (<10%)	P48416	Cytochrome P450 10 (EC 1.14.-.-) (CYPX)	NA	hit, no GO BP
GN011638	Chromosome_5A	678	2	23	40.41297935103245	0.8820135746606335	0.43243243243243246	23	0	0.45558086560364464	22	0	0	1	0	0.5855855855855856	63	0	unmethylated (<10%)	P36608	Neuronal calcium sensor 1 (NCS-1)	chemosensory behavior [GO:0007635]; chemotaxis [GO:0006935]; regulation of signal transduction [GO:0009966]; response to alkaline pH [GO:0010446]	hit with GO BP
GN011639	Chromosome_5A	708	2	25	41.24293785310734	0.8695652173913043	0.2827521206409048	25	0	0.30959752321981426	23	0	0	2	0	0.7792930698580574	61	0	unmethylated (<10%)	P29104	Hippocalcin-like protein 4 (Neurocalcin-beta)	regulation of signal transduction [GO:0009966]	hit with GO BP
GN011640	Chromosome_5A	2351	2	66	35.51680136112293	0.8925588458618071	0.9011328527291452	66	0	0.6896551724137931	33	0	1.1005502751375689	33	0	0.5226480836236934	60	0	unmethylated (<10%)	P29105	Hippocalcin-like protein 1 (Neurocalcin-gamma)	regulation of signal transduction [GO:0009966]	hit with GO BP
GN011641	Chromosome_5A	7625	13	244	36.708196721311474	0.9526125803230844	0.5190311418685121	244	0	0.5748778384593274	73	0	0.49923586347427407	171	0	0.6252605252188412	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011642	Chromosome_5A	204	1	12	43.627450980392155	1.2489795918367348	0.4694835680751174	12	0	0.4694835680751174	12	0	NA	NA	NA	0.6875	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011643	Chromosome_5A	3945	3	100	33.48542458808618	0.9042814114583572	0.7959714100064977	98	0	1.1594202898550725	34	0	0.6909547738693468	64	0	0.5009633911368016	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011649	Chromosome_5A	8994	6	131	34.37847453858128	0.49569542734605837	77.1497039751903	127	0.7795275590551181	76.61241711874624	36	0.8888888888888888	77.31370745170193	91	0.7362637362637363	38.93805309734513	32	0.46875	methylated (>=50%)	Q1JQD2	Glutamate-rich WD repeat-containing protein 1	DNA replication [GO:0006260]; nucleosome assembly [GO:0006334]; nucleosome disassembly [GO:0006337]; ribosome biogenesis [GO:0042254]	hit with GO BP
GN011648	Chromosome_5A	493	2	15	40.36511156186612	0.7474226804123711	2.808988764044944	15	0	3.488372093023256	13	0	0	2	0	8.304794520547945	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011647	Chromosome_5A	408	1	20	42.15686274509804	1.1106574111882401	0.36319612590799033	20	0	0.36319612590799033	20	0	NA	NA	NA	5.0359712230215825	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011646	Chromosome_5A	1200	1	59	43.25	1.0546700431997618	0.6593406593406593	59	0	0.6593406593406593	59	0	NA	NA	NA	2.8857715430861726	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011654	Chromosome_5A	285	1	6	43.1578947368421	0.475	89.57654723127035	6	1	89.57654723127035	6	1	NA	NA	NA	77.17948717948718	21	0.9523809523809523	methylated (>=50%)	Q9UI43	rRNA methyltransferase 2, mitochondrial (EC 2.1.1.-) (16S rRNA (uridine(1369)-2'-O)-methyltransferase) (16S rRNA [Um1369] 2'-O-methyltransferase) (Protein ftsJ homolog 2)	mitochondrial large ribosomal subunit assembly [GO:1902775]; ribosomal large subunit assembly [GO:0000027]; rRNA 2'-O-methylation [GO:0000451]; rRNA methylation [GO:0031167]; rRNA processing [GO:0006364]	hit with GO BP
GN011655	Chromosome_5A	477	1	32	48.84696016771488	1.1321762349799733	0.44472681067344344	32	0	0.44472681067344344	32	0	NA	NA	NA	0.5219527172244397	99	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011656	Chromosome_5A	375	1	31	53.86666666666667	1.1413843888070692	0.6243496357960457	31	0	0.6243496357960457	31	0	NA	NA	NA	0.4874947011445528	93	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011657	Chromosome_5A	360	1	22	46.94444444444444	1.2021857923497268	0	12	0	0	12	0	NA	NA	NA	18.152350081037277	47	0.19148936170212766	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011658	Chromosome_5A	303	1	12	44.224422442244226	0.8248638838475499	0.8264462809917356	12	0	0.8264462809917356	12	0	NA	NA	NA	0.32017075773745995	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011659	Chromosome_5A	726	1	22	43.25068870523416	0.6489253646447	0.9505703422053232	22	0	0.9505703422053232	22	0	NA	NA	NA	5.776736924277908	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011660	Chromosome_5A	2025	2	54	35.65432098765432	0.8394942306363573	1.867816091954023	54	0	1.0256410256410255	7	0	1.954569466455362	47	0	0.6475485661424607	46	0	unmethylated (<10%)	A6QLU8	Nucleoredoxin (EC 1.8.1.8)	circulatory system development [GO:0072359]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of Wnt signaling pathway [GO:0030178]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN011661	Chromosome_5A	600	1	34	42.666666666666664	1.2470199889968825	0.7692307692307693	33	0	0.7692307692307693	33	0	NA	NA	NA	0.3434739941118744	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011669	Chromosome_5A	360	1	11	41.388888888888886	0.7279411764705882	0.4329004329004329	11	0	0.4329004329004329	11	0	NA	NA	NA	5.736981465136805	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011670	Chromosome_5A	1151	3	22	34.404865334491745	0.6459199551054766	8.454810495626822	19	0.15789473684210525	20.393120393120395	11	0.2727272727272727	0.6430868167202572	8	0	13.16094172134311	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011671	Chromosome_5A	1035	1	43	41.64251207729468	0.9589528118939884	0.5807200929152149	41	0	0.5807200929152149	41	0	NA	NA	NA	1.7543859649122806	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011672	Chromosome_5A	333	1	7	44.74474474474474	0.42045454545454547	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6353240152477764	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011673	Chromosome_5A	333	1	7	44.74474474474474	0.42045454545454547	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9771986970684039	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011688	Chromosome_5A	897	1	42	44.593088071348944	0.9487043892120571	0.7789095266626722	42	0	0.7789095266626722	42	0	NA	NA	NA	0.5094951366373321	63	0	unmethylated (<10%)	Q92886	Neurogenin-1 (NGN-1) (Class A basic helix-loop-helix protein 6) (bHLHa6) (Neurogenic basic-helix-loop-helix protein) (Neurogenic differentiation factor 3) (NeuroD3)	auditory behavior [GO:0031223]; axon development [GO:0061564]; cochlea development [GO:0090102]; cochlea morphogenesis [GO:0090103]; craniofacial suture morphogenesis [GO:0097094]; forebrain development [GO:0030900]; genitalia development [GO:0048806]; genitalia morphogenesis [GO:0035112]; hard palate morphogenesis [GO:1905748]; inner ear development [GO:0048839]; inner ear morphogenesis [GO:0042472]; learned vocalization behavior [GO:0098583]; mastication [GO:0071626]; negative regulation of relaxation of muscle [GO:1901078]; negative regulation of saliva secretion [GO:1905747]; nervous system development [GO:0007399]; neuromuscular process controlling balance [GO:0050885]; peristalsis [GO:0030432]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of muscle organ development [GO:0048634]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory organ development [GO:0007423]; thorax and anterior abdomen determination [GO:0007356]; trigeminal nerve development [GO:0021559]; vestibulocochlear nerve formation [GO:0021650]	hit with GO BP
GN011687	Chromosome_5A	591	1	29	42.978003384094755	1.0896433339691016	0.4421518054532056	29	0	0.4421518054532056	29	0	NA	NA	NA	0.4051477597712107	81	0	unmethylated (<10%)	Q8AW52	Transcription factor atoh7 (Atonal bHLH transcription factor 7) (Helix-loop-helix protein zATH-5) (zATH5) (Protein atonal homolog 5) (Protein atonal homolog 7) (Protein lakritz)	axon development [GO:0061564]; camera-type eye development [GO:0043010]; cell fate commitment [GO:0045165]; eye development [GO:0001654]; neural retina development [GO:0003407]; neuron fate commitment [GO:0048663]; pigmentation [GO:0043473]; positive regulation of neurogenesis [GO:0050769]; positive regulation of retinal ganglion cell axon guidance [GO:1902336]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell cycle [GO:0051726]; regulation of mitotic cell cycle [GO:0007346]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; retina layer formation [GO:0010842]; sensory organ development [GO:0007423]; swimming behavior [GO:0036269]	hit with GO BP
GN011686	Chromosome_5A	11893	4	215	35.474648953165726	0.5748513184736488	85.5436010224098	215	0.9395348837209302	51.15384615384615	7	0.7142857142857143	86.08343899052105	208	0.9471153846153846	0.8192244675040962	51	0	methylated (>=50%)	Q13257	Mitotic spindle assembly checkpoint protein MAD2A (HsMAD2) (Mitotic arrest deficient 2-like protein 1) (MAD2-like protein 1)	mitotic spindle assembly checkpoint signaling [GO:0007094]; negative regulation of mitotic cell cycle [GO:0045930]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of ubiquitin protein ligase activity [GO:1904667]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]	hit with GO BP
GN011685	Chromosome_5A	1970	4	66	42.74111675126903	0.7336436732966568	0.5792522380200106	66	0	0.6381039197812215	41	0	0.49875311720698257	25	0	0.7366482504604052	52	0	unmethylated (<10%)	Q92038	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)	monounsaturated fatty acid biosynthetic process [GO:1903966]; response to fatty acid [GO:0070542]; unsaturated fatty acid biosynthetic process [GO:0006636]	hit with GO BP
GN011684	Chromosome_5A	2039	4	62	41.98136341343796	0.6914775493236628	1.2953367875647668	62	0	1.2110726643598615	38	0	1.3793103448275863	24	0	0.41522491349480967	53	0	unmethylated (<10%)	Q92038	Acyl-CoA desaturase (EC 1.14.19.1) (Delta(9)-desaturase) (Delta-9 desaturase) (Fatty acid desaturase) (Stearoyl-CoA desaturase)	monounsaturated fatty acid biosynthetic process [GO:1903966]; response to fatty acid [GO:0070542]; unsaturated fatty acid biosynthetic process [GO:0006636]	hit with GO BP
GN011683	Chromosome_5A	3043	3	86	40.68353598422609	0.6833987924875174	0.49261083743842365	82	0	0.57636887608069165	45	0	0.3965631196298744	37	0	0.5523166615526235	59	0	unmethylated (<10%)	Q9NWM0	Spermine oxidase (EC 1.5.3.16) (Polyamine oxidase 1) (PAO-1) (PAOh1)	polyamine biosynthetic process [GO:0006596]; polyamine catabolic process [GO:0006598]; spermine catabolic process [GO:0046208]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN011682	Chromosome_5A	9839	4	254	37.94084764711861	0.7195158747433289	1.014268523293794	254	0	0.6852667645619187	53	0	1.0843499113752477	201	0	1.2287334593572778	46	0	unmethylated (<10%)	Q9NWM0	Spermine oxidase (EC 1.5.3.16) (Polyamine oxidase 1) (PAO-1) (PAOh1)	polyamine biosynthetic process [GO:0006596]; polyamine catabolic process [GO:0006598]; spermine catabolic process [GO:0046208]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN011681	Chromosome_5A	3410	7	30	34.48680351906158	0.29591447117220315	81.95841716968478	30	0.9	81.78633975481611	10	0.9	82.06521739130434	20	0.9	0.963275135460566	43	0	methylated (>=50%)	Q9D9S1	UPF0193 protein EVG1 homolog	NA	hit, no GO BP
GN011680	Chromosome_5A	6504	4	116	37.57687576875769	0.5062266500622665	88.52828878861506	110	0.8727272727272727	81.6593886462882	42	0.7619047619047619	91.17576340466458	68	0.9411764705882353	0.4253673627223511	51	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011679	Chromosome_5A	2402	2	71	38.96752706078268	0.7907910600018547	1.1402902557014514	58	0	0.8825526137135098	40	0	1.4074595355383532	18	0	0.7404914170313026	68	0	unmethylated (<10%)	Q04791	Fatty acyl-CoA hydrolase precursor, medium chain (EC 3.1.2.-) (Thioesterase B)	NA	hit, no GO BP
GN011678	Chromosome_5A	2722	2	81	38.83174136664218	0.8100833296591861	0.5259697567389875	71	0	0.44742729306487694	44	0	0.5878894767783657	27	0	0.7505773672055427	39	0	unmethylated (<10%)	Q04791	Fatty acyl-CoA hydrolase precursor, medium chain (EC 3.1.2.-) (Thioesterase B)	NA	hit, no GO BP
GN011677	Chromosome_5A	409	2	10	39.85330073349633	0.6455176767676768	0	10	0	0	8	0	0	2	0	0.4158580537843083	56	0	unmethylated (<10%)	D8VNS6	C-type lectin (CTL)	NA	hit, no GO BP
GN011676	Chromosome_5A	1116	1	79	40.59139784946237	1.7593390804597702	0.6164383561643836	71	0	0.6164383561643836	71	0	NA	NA	NA	0.5487804878048781	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011675	Chromosome_5A	2238	4	35	34.71849865951743	0.5194297082228116	0.3073770491803279	35	0	0.5434782608695652	9	0	0.21428571428571427	26	0	0.6684491978609626	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011690	Chromosome_5A	627	3	12	30.781499202551835	0.8176483373179744	0	8	0	0	7	0	0	1	0	0.3494060097833683	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011701	Chromosome_5A	896	4	16	32.589285714285715	0.6771207254864916	0.4162812210915819	9	0	0.3192338387869114	5	0	0.5500550055005501	4	0	0.3431461080007224	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011700	Chromosome_5A	904	4	17	32.63274336283186	0.7070298122929702	0.8743169398907104	15	0	0.8305647840531561	8	0	0.9584664536741214	7	0	0.6403118040089086	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011699	Chromosome_5A	498	1	16	43.975903614457835	0.6840659340659341	0	7	0	0	7	0	NA	NA	NA	0.9487666034155597	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011698	Chromosome_5A	810	1	38	42.96296296296296	1.0545790934320074	0.6669006669006668	38	0	0.6669006669006668	38	0	NA	NA	NA	0.5988023952095808	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011697	Chromosome_5A	1163	4	33	35.94153052450559	0.8825802000689893	0.4923413566739606	33	0	0.5347593582887701	23	0	0.42492917847025496	10	0	0.9167583425009168	37	0	unmethylated (<10%)	P51824	ADP-ribosylation factor 1 (EC 3.6.5.2)	intracellular protein transport [GO:0006886]	hit with GO BP
GN011696	Chromosome_5A	1277	4	37	34.53406421299922	0.9772689666583934	0.5945945945945946	37	0	0.4250797024442083	23	0	0.77007700770077	14	0	0.39360963185922665	60	0	unmethylated (<10%)	P91924	ADP-ribosylation factor	NA	hit, no GO BP
GN011695	Chromosome_5A	1593	4	29	31.575643440050218	0.7310114564212925	0.4060324825986079	29	0	0.4694835680751174	21	0	0.30349013657056145	8	0	1.2349397590361446	42	0	unmethylated (<10%)	P51824	ADP-ribosylation factor 1 (EC 3.6.5.2)	intracellular protein transport [GO:0006886]	hit with GO BP
GN011694	Chromosome_5A	2395	4	73	38.95615866388309	0.8038760402777139	0.5457025920873124	73	0	0.373134328358209	24	0	0.6451612903225806	49	0	0.5871725383920506	50	0	unmethylated (<10%)	P91924	ADP-ribosylation factor	NA	hit, no GO BP
GN011693	Chromosome_5A	1242	4	36	35.34621578099839	0.9297567061759201	0.5641748942172073	36	0	0.8123476848090982	24	0	0.22321428571428573	12	0	0.3401360544217687	36	0	unmethylated (<10%)	P22274	ADP-ribosylation factor	cellular response to reactive oxygen species [GO:0034614]; intracellular protein transport [GO:0006886]	hit with GO BP
GN011692	Chromosome_5A	1014	1	42	39.94082840236686	1.0390865173473869	1.1363636363636365	42	0	1.1363636363636365	42	0	NA	NA	NA	0.6407689227072487	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011691	Chromosome_5A	15091	13	343	34.93472930885959	0.7449967738764447	1.597184623714131	343	0	1.0750728862973762	111	0	1.8179017100600832	232	0	0.745920745920746	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011707	Chromosome_5A	11855	10	187	35.37747785744411	0.5051278721096619	75.69019825829164	185	0.8324324324324325	51.7687074829932	30	0.5	79.46160446160447	155	0.896774193548387	1.3038548752834467	26	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011706	Chromosome_5A	362	2	3	42.5414364640884	0.18942961800104657	94.8905109489051	3	1	94.05940594059406	2	1	97.22222222222223	1	1	68.46846846846847	5	0.8	NA	Q28C34	Ankyrin repeat domain-containing protein 13C	protein targeting to membrane [GO:0006612]	hit with GO BP
GN011705	Chromosome_5A	1204	2	43	41.029900332225914	0.85964300539643	0.3560528992878942	43	0	0.3844041735310269	40	0	0	3	0	0.7299270072992701	37	0	unmethylated (<10%)	Q6P2X9	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN011708	Chromosome_5A	45802	62	629	36.00061132701629	0.4252292790552854	71.46944156171992	625	0.856	66.07314725697786	175	0.8114285714285714	73.10998134669543	450	0.8733333333333333	0.6110868616324749	54	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011709	Chromosome_5A	7289	7	176	34.600082315818355	0.8081455597363516	0.7998099461514095	167	0	0.7076755579749592	29	0	0.8154943934760448	138	0	0.4475703324808184	51	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN011710	Chromosome_5A	8404	9	215	34.79295573536411	0.8498039702606707	1.765536723163842	206	0	0.8849557522123894	46	0	1.9582526361093178	160	0	0.5231037489102005	50	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN011711	Chromosome_5A	2139	2	39	36.74614305750351	0.5401235367243344	8.364813815434431	39	0.02564102564102564	5.811138014527845	23	0	10.41869522882181	16	0.0625	9.42951438000943	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011712	Chromosome_5A	330	1	13	48.78787878787879	0.6651162790697674	0.4728132387706856	13	0	0.4728132387706856	13	0	NA	NA	NA	0.4885381435550545	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011713	Chromosome_5A	651	1	31	46.6973886328725	0.8799215173315893	1.2302284710017575	30	0	1.2302284710017575	30	0	NA	NA	NA	0.7881773399014779	70	0	unmethylated (<10%)	Q9UHM6	Melanopsin (Opsin-4)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; cellular response to light stimulus [GO:0071482]; entrainment of circadian clock by photoperiod [GO:0043153]; G protein-coupled receptor signaling pathway [GO:0007186]; hyaloid vascular plexus regression [GO:1990384]; optokinetic behavior [GO:0007634]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; phototransduction [GO:0007602]; regulation of circadian rhythm [GO:0042752]; visual perception [GO:0007601]	hit with GO BP
GN011714	Chromosome_5A	1443	1	39	38.25363825363825	0.7530509018894181	0.24524831391784183	39	0	0.24524831391784183	39	0	NA	NA	NA	0.7656967840735069	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011715	Chromosome_5A	25361	30	388	36.15393714758882	0.47169187612229774	90.03434986595174	388	0.9819587628865979	92.54465913233686	114	0.9649122807017544	89.285325791363	274	0.9890510948905109	1.653398652786283	58	0	methylated (>=50%)	Q8N122	Regulatory-associated protein of mTOR (Raptor) (p150 target of rapamycin (TOR)-scaffold protein)	cellular response to amino acid stimulus [GO:0071230]; cellular response to glucose stimulus [GO:0071333]; cellular response to hypoxia [GO:0071456]; cellular response to L-leucine [GO:0071233]; cellular response to nutrient levels [GO:0031669]; cellular response to osmotic stress [GO:0071470]; cellular response to starvation [GO:0009267]; DNA damage response [GO:0006974]; negative regulation of autophagy [GO:0010507]; positive regulation of cell growth [GO:0030307]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; positive regulation of glycolytic process [GO:0045821]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of odontoblast differentiation [GO:1901331]; positive regulation of osteoclast differentiation [GO:0045672]; positive regulation of pentose-phosphate shunt [GO:1905857]; positive regulation of TOR signaling [GO:0032008]; positive regulation of transcription by RNA polymerase III [GO:0045945]; regulation of cell growth [GO:0001558]; regulation of cell size [GO:0008361]; response to xenobiotic stimulus [GO:0009410]; social behavior [GO:0035176]; TOR signaling [GO:0031929]; TORC1 signaling [GO:0038202]	hit with GO BP
GN011716	Chromosome_5A	5649	4	61	36.82067622588069	0.33619882219334296	81.14128776319805	61	0.9836065573770492	86.45038167938931	30	0.9666666666666667	78.64513234634366	31	1	68.68686868686869	2	1	methylated (>=50%)	O62640	Putative inhibitor of apoptosis	negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of cell cycle [GO:0051726]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN011727	Chromosome_5A	2859	1	45	41.23819517313746	0.3702515252676413	88.4873515745999	45	0.9333333333333333	88.4873515745999	45	0.9333333333333333	NA	NA	NA	47.527272727272724	34	0.38235294117647056	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011726	Chromosome_5A	8777	6	140	33.029508943830464	0.5861118610403846	70.68538398018167	130	0.7076923076923077	50.6006006006006	13	0.6153846153846154	72.3979003968762	117	0.717948717948718	45.723270440251575	36	0.5833333333333334	methylated (>=50%)	Q9Z2X3	26S proteasome non-ATPase regulatory subunit 10 (26S proteasome regulatory subunit p28) (Gankyrin)	negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043518]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell growth [GO:0030307]; positive regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045737]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein ubiquitination [GO:0031398]; proteasome regulatory particle assembly [GO:0070682]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011725	Chromosome_5A	1133	3	10	30.36187113857017	0.38770831194606986	30.29585798816568	10	0.4	48.529411764705884	5	0.6	13.272311212814646	5	0.2	1.0416666666666667	42	0	sparse (10-50%)	Q9DCM4	Dynein axonemal light chain 4	microtubule-based process [GO:0007017]	hit with GO BP
GN011724	Chromosome_5A	1141	2	33	43.90885188431201	0.6276127612761276	1.440576230492197	33	0	1.5810276679841897	32	0	0	1	0	2.3975251353441607	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011723	Chromosome_5A	1894	2	25	36.8532206969377	0.3897857207537229	0.43383947939262474	15	0	0.6097560975609756	10	0	0	5	0	2.6841448189762795	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011722	Chromosome_5A	207	1	14	50.72463768115942	1.0870217554388597	0.554016620498615	14	0	0.554016620498615	14	0	NA	NA	NA	3.676470588235294	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011721	Chromosome_5A	303	1	14	44.224422442244226	0.9526162137884572	1.075268817204301	14	0	1.075268817204301	14	0	NA	NA	NA	0.6926952141057935	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011720	Chromosome_5A	309	1	5	46.92556634304207	0.309991974317817	0	5	0	0	5	0	NA	NA	NA	3.460514640638864	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011719	Chromosome_5A	471	1	10	40.97664543524416	0.529689608636977	1.2254901960784315	10	0	1.2254901960784315	10	0	NA	NA	NA	0.9345794392523364	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011718	Chromosome_5A	993	1	33	39.97985901309164	0.8491578129048977	2.796420581655481	33	0	2.796420581655481	33	0	NA	NA	NA	1.1150047785919082	41	0	unmethylated (<10%)	Q7T3S5	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A (EC 2.4.1.206) (Lactotriaosylceramide synthase A) (Lc(3)Cer synthase A) (Lc3 synthase A) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5A) (BGnT-5A) (Beta-1,3-Gn-T5A) (Beta-1,3-N-acetylglucosaminyltransferase 5A) (Beta3Gn-T5A)	glycoprotein biosynthetic process [GO:0009101]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN012519	Chromosome_5A	464	1	10	36.63793103448276	0.6465997770345596	0.31746031746031744	10	0	0.31746031746031744	10	0	NA	NA	NA	0.5250069079856314	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011717	Chromosome_5A	765	1	21	40.130718954248366	0.687125748502994	0.7541478129713424	21	0	0.7541478129713424	21	0	NA	NA	NA	0.4140786749482402	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011728	Chromosome_5A	711	1	29	41.20956399437412	0.9715860899067006	1.834862385321101	29	0	1.834862385321101	29	0	NA	NA	NA	3.765281173594132	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011742	Chromosome_5A	1956	1	54	37.83231083844581	0.776995564186878	0.4858791375645308	54	0	0.4858791375645308	54	0	NA	NA	NA	0.6246746486205101	39	0	unmethylated (<10%)	E1BD59	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]	hit with GO BP
GN011741	Chromosome_5A	1323	1	30	37.26379440665155	0.6670364021377433	0.2031488065007618	30	0	0.2031488065007618	30	0	NA	NA	NA	0.796812749003984	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011740	Chromosome_5A	651	1	17	36.866359447004605	0.8095238095238095	0.5097706032285472	17	0	0.5097706032285472	17	0	NA	NA	NA	0.2952227589908749	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011739	Chromosome_5A	518	2	10	38.61003861003861	0.5180518051805181	0.5063291139240507	10	0	0.5063291139240507	10	0	NA	NA	NA	0.43426766679826295	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011738	Chromosome_5A	508	2	15	36.41732283464567	0.8918539325842697	0	15	0	0	15	0	NA	NA	NA	0.5494505494505495	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011737	Chromosome_5A	363	1	23	44.90358126721763	1.262704174228675	1.2956419316843346	23	0	1.2956419316843346	23	0	NA	NA	NA	3.278688524590164	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011736	Chromosome_5A	652	2	21	36.50306748466258	0.9824913892078071	0.8951406649616368	21	0	0.9501187648456056	12	0	0.8310249307479224	9	0	0.8039579468150897	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011735	Chromosome_5A	387	1	8	42.11886304909561	0.46612466124661245	0	8	0	0	8	0	NA	NA	NA	0.5909389363099147	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011734	Chromosome_5A	1280	2	33	38.984375	0.6788813886210222	0.4592422502870264	33	0	0.4065040650406504	30	0	0.7518796992481203	3	0	0.46403712296983757	47	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN011743	Chromosome_5A	614	2	14	42.83387622149837	0.5071386430678466	0.7299270072992701	14	0	0.6230529595015576	13	0	2.3255813953488373	1	0	1.1954022988505748	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011744	Chromosome_5A	11647	13	119	32.96986348415901	0.3778149536969898	86.49042231432732	118	0.9322033898305084	94.71210340775558	14	0.9285714285714286	85.62407132243685	104	0.9326923076923077	0.5992704533611256	62	0	methylated (>=50%)	P47809	Dual specificity mitogen-activated protein kinase kinase 4 (MAP kinase kinase 4) (MAPKK 4) (EC 2.7.12.2) (C-JUN N-terminal kinase kinase 1) (JNK kinase 1) (JNKK 1) (JNK-activating kinase 1) (MAPK/ERK kinase 4) (MEK 4) (SAPK/ERK kinase 1) (SEK1)	cell growth involved in cardiac muscle cell development [GO:0061049]; cellular response to mechanical stimulus [GO:0071260]; ERBB signaling pathway [GO:0038127]; intrinsic apoptotic signaling pathway in response to hydrogen peroxide [GO:0036481]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of motor neuron apoptotic process [GO:2000672]; neuromuscular junction development [GO:0007528]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA replication [GO:0045740]; positive regulation of JNK cascade [GO:0046330]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein phosphorylation [GO:0001934]; protein phosphorylation [GO:0006468]; response to wounding [GO:0009611]; smooth muscle cell apoptotic process [GO:0034390]	hit with GO BP
GN011745	Chromosome_5A	10293	5	102	34.266006023511125	0.338542946417343	86.1839367457345	102	0.9313725490196079	71.66666666666667	15	0.6666666666666666	87.79472954230236	87	0.9770114942528736	37.62606671838635	22	0.36363636363636365	methylated (>=50%)	Q96S21	Ras-related protein Rab-40C (EC 3.6.5.2) (Rar-like protein) (Ras-like protein family member 8C) (SOCS box-containing protein RAR3)	cell migration [GO:0016477]; exocytosis [GO:0006887]; intracellular signal transduction [GO:0035556]; lipid droplet formation [GO:0140042]; negative regulation of focal adhesion assembly [GO:0051895]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN011746	Chromosome_5A	8254	8	63	34.75890477344318	0.25494043241653186	89.72243060765192	63	1	87.1513102282333	21	1	90.80255681818181	42	1	82.398753894081	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011747	Chromosome_5A	9974	9	111	33.55724884700221	0.3979604381068092	87.72753963593658	111	0.963963963963964	92.21336603310853	30	0.9333333333333333	86.31538313066976	81	0.9753086419753086	26.18243243243243	35	0.3142857142857143	methylated (>=50%)	Q5ZL26	Phosphoribosyl pyrophosphate synthase-associated protein 2 (PRPP synthase-associated protein 2)	5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]	hit with GO BP
GN011748	Chromosome_5A	8314	4	112	34.724560981477026	0.44691201597266217	80.72227220151652	112	0.8839285714285714	28.104575163398692	11	0.2727272727272727	85.21411633421677	101	0.9504950495049505	55.69721115537848	42	0.5476190476190477	methylated (>=50%)	A7M7B9	Endonuclease III-like protein 1 (EC 3.2.2.-) (EC 4.2.99.18) (Bifunctional DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase) (DNA glycosylase/AP lyase)	base-excision repair, AP site formation [GO:0006285]; nucleotide-excision repair [GO:0006289]	hit with GO BP
GN011749	Chromosome_5A	5886	13	59	33.6901121304791	0.3555978341006275	72.42476851851852	59	0.6610169491525424	85.72719060523939	18	0.8333333333333334	66.15581098339719	41	0.5853658536585366	0.8039579468150897	29	0	methylated (>=50%)	O42587	26S proteasome regulatory subunit 6A-A (26S proteasome AAA-ATPase subunit RPT5-A) (Proteasome 26S subunit ATPase 3-A) (Tat-binding protein 6) (TBP-6)	NA	hit, no GO BP
GN011750	Chromosome_5A	180	1	6	47.77777777777778	0.6650246305418719	0.44052863436123346	6	0	0.44052863436123346	6	0	NA	NA	NA	1.4178112538768277	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011751	Chromosome_5A	3121	3	114	41.58923421980135	0.8447311439913389	1.5247108307045216	114	0	0.7722007722007722	48	0	2.0444444444444443	66	0	0.5347593582887701	40	0	unmethylated (<10%)	Q503M4	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN011752	Chromosome_5A	201	1	13	56.21890547263681	0.8478260869565217	1.044776119402985	13	0	1.044776119402985	13	0	NA	NA	NA	0.31446540880503143	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011753	Chromosome_5A	3527	2	96	37.39722143464701	0.779469046106246	0.5654123610840319	96	0	0.8032128514056225	14	0	0.5398402072986396	82	0	0.9932279909706546	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011754	Chromosome_5A	13744	9	317	34.85157159487777	0.7595778224827189	1.4011325821705878	316	0	1.358695652173913	62	0	1.4099400775467044	254	0	7.918444760550024	32	0	unmethylated (<10%)	O14511	Pro-neuregulin-2, membrane-bound isoform (Pro-NRG2) [Cleaved into: Neuregulin-2 (NRG-2) (Divergent of neuregulin-1) (DON-1) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)]	animal organ development [GO:0048513]; ERBB4 signaling pathway [GO:0038130]; intracellular signal transduction [GO:0035556]; nervous system development [GO:0007399]; signal transduction [GO:0007165]	hit with GO BP
GN011755	Chromosome_5A	3293	2	48	35.5602793805041	0.46176498083574835	82.35919234856536	48	0.875	66.66666666666667	14	0.6428571428571429	89.07435508345979	34	0.9705882352941176	73.12560856864654	51	0.7254901960784313	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011756	Chromosome_5A	13737	8	188	36.16510155055689	0.4203149730605509	79.93435259566381	173	0.9075144508670521	74.38423645320196	18	0.9444444444444444	80.46771444802121	155	0.9032258064516129	65.26627218934911	29	0.6896551724137931	methylated (>=50%)	A7SE07	Cytosolic Fe-S cluster assembly factor NUBP2 homolog	iron-sulfur cluster assembly [GO:0016226]	hit with GO BP
GN011757	Chromosome_5A	462	1	12	44.58874458874459	0.5226244343891403	0.7528230865746549	12	0	0.7528230865746549	12	0	NA	NA	NA	0.3240178209801539	30	0	unmethylated (<10%)	O95477	Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 1) (ATP-binding cassette transporter 1) (ABC-1) (ATP-binding cassette 1) (Cholesterol efflux regulatory protein)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cellular response to cholesterol [GO:0071397]; cellular response to cytokine stimulus [GO:0071345]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to low-density lipoprotein particle stimulus [GO:0071404]; cellular response to retinoic acid [GO:0071300]; cellular response to xenobiotic stimulus [GO:0071466]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; endosomal transport [GO:0016197]; export across plasma membrane [GO:0140115]; G protein-coupled receptor signaling pathway [GO:0007186]; high-density lipoprotein particle assembly [GO:0034380]; intracellular cholesterol transport [GO:0032367]; lipoprotein biosynthetic process [GO:0042158]; lysosome organization [GO:0007040]; negative regulation of cholesterol storage [GO:0010887]; negative regulation of macrophage derived foam cell differentiation [GO:0010745]; phospholipid efflux [GO:0033700]; phospholipid homeostasis [GO:0055091]; phospholipid translocation [GO:0045332]; platelet dense granule organization [GO:0060155]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of high-density lipoprotein particle assembly [GO:0090108]; protein secretion [GO:0009306]; protein transmembrane transport [GO:0071806]; regulation of Cdc42 protein signal transduction [GO:0032489]; regulation of high-density lipoprotein particle assembly [GO:0090107]; response to laminar fluid shear stress [GO:0034616]; response to vitamin B3 [GO:0033552]; reverse cholesterol transport [GO:0043691]; signal release [GO:0023061]	hit with GO BP
GN011758	Chromosome_5A	1541	4	24	39.45489941596366	0.4043956043956044	0.21715526601520088	24	0	0.26833631484794274	17	0	0.13812154696132597	7	0	0.5298013245033113	17	0	unmethylated (<10%)	Q8R420	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lung development [GO:0030324]; organelle assembly [GO:0070925]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of lipid transport [GO:0032368]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN011759	Chromosome_5A	750	1	17	45.46666666666667	0.4486277269528501	0.5449591280653951	16	0	0.5449591280653951	16	0	NA	NA	NA	0.7334963325183375	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011760	Chromosome_5A	1701	4	20	36.27278071722516	0.3588910456578614	0.7993268826251577	18	0	0.8830022075055187	15	0	0.5309734513274337	3	0	0.7362784471218207	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011761	Chromosome_5A	23451	20	334	35.81936804400665	0.4466521930831995	86.91151202749141	333	0.954954954954955	87.56022777047744	95	0.968421052631579	86.75323287378433	238	0.9495798319327731	90.02333722287048	24	1	methylated (>=50%)	Q99758	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ABC-C transporter) (ATP-binding cassette sub-family A member 3) (ATP-binding cassette transporter 3) (ATP-binding cassette 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lipid transport [GO:0006869]; lung development [GO:0030324]; organelle assembly [GO:0070925]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; response to xenobiotic stimulus [GO:0009410]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN011762	Chromosome_5A	5332	4	43	34.48987246811703	0.2716546721674696	73.91868512110727	43	0.7906976744186046	58.72832369942196	19	0.631578947368421	82.99930891499655	24	0.9166666666666666	59.122401847575055	27	0.5925925925925926	methylated (>=50%)	Q5M9B1	SPRY domain-containing SOCS box protein 3 (SSB-3)	negative regulation of cGAS/STING signaling pathway [GO:0160049]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN011763	Chromosome_5A	2828	5	33	39.39179632248939	0.3042168674698795	53.129890453834115	32	0.46875	48.724489795918366	22	0.4090909090909091	60.121457489878544	10	0.6	46.161167512690355	39	0.41025641025641024	methylated (>=50%)	P15880	Small ribosomal subunit protein uS5 (40S ribosomal protein S2) (40S ribosomal protein S4) (Protein LLRep3)	cytoplasmic translation [GO:0002181]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; translation [GO:0006412]	hit with GO BP
GN011764	Chromosome_5A	1465	2	59	44.436860068259385	0.8225637609440426	0.23668639053254437	59	0	0.20093770931011387	55	0	0.5076142131979695	4	0	0.977729494839761	87	0	unmethylated (<10%)	P53470	Actin-1 (EC 3.6.4.-)	NA	hit, no GO BP
GN011766	Chromosome_5A	6544	2	126	35.039731051344745	0.6273387950868565	34.3244653103808	126	0.2619047619047619	1.0830324909747293	58	0	44.86944571690334	68	0.4852941176470588	0.4518595759471672	72	0	sparse (10-50%)	Q93129	Actin, cytoplasmic (EC 3.6.4.-) (BbCA1) [Cleaved into: Actin, cytoplasmic, N-terminally processed]	NA	hit, no GO BP
GN011767	Chromosome_5A	19331	17	349	36.41818840204852	0.5455263127465687	84.90264398442304	319	0.9216300940438872	90.48400328137818	44	0.9090909090909091	84.28291660973721	275	0.9236363636363636	1.0416666666666667	32	0	methylated (>=50%)	P55884	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (Eukaryotic translation initiation factor 3 subunit 9) (Prt1 homolog) (hPrt1) (eIF-3-eta) (eIF3 p110) (eIF3 p116)	formation of cytoplasmic translation initiation complex [GO:0001732]; IRES-dependent viral translational initiation [GO:0075522]; regulation of translational initiation [GO:0006446]; translational initiation [GO:0006413]; viral translational termination-reinitiation [GO:0075525]	hit with GO BP
GN011768	Chromosome_5A	17526	13	153	33.652858610065046	0.3091576557875099	68.04830621226077	153	0.7777777777777778	78.62706913339825	40	0.875	65.23260334326811	113	0.7433628318584071	16.94290976058932	13	0.15384615384615385	methylated (>=50%)	Q7ZT82	RNA binding protein fox-1 homolog 1-like (Ataxin 2-binding protein 1-like) (Fox-1 homolog-like protein 1)	cardiac muscle cell development [GO:0055013]; heart process [GO:0003015]; nervous system development [GO:0007399]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN011770	Chromosome_5A	49127	15	557	34.457630223705905	0.38761685490429526	74.32669437570574	553	0.8444846292947559	58.411843876177656	39	0.6666666666666666	75.22719195816622	514	0.857976653696498	60.559006211180126	19	0.9473684210526315	methylated (>=50%)	Q5PPZ9	Rap1 GTPase-GDP dissociation stimulator 1-B (Rap1gds1-B protein) (RalB-binding protein B) (XsmgGDS-B) (smgGDS-B)	positive regulation of GTPase activity [GO:0043547]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN011771	Chromosome_5A	77257	37	790	34.66999754067593	0.341513367063756	55.645161290322584	737	0.5902306648575305	69.58160572936299	119	0.773109243697479	53.645410784790954	618	0.5550161812297735	32.88534229315414	38	0.34210526315789475	methylated (>=50%)	Q62417	Sorbin and SH3 domain-containing protein 1 (Ponsin) (SH3 domain protein 5) (SH3P12) (c-Cbl-associated protein) (CAP)	acetylcholine receptor signaling pathway [GO:0095500]; cell-substrate adhesion [GO:0031589]; cellular response to insulin stimulus [GO:0032869]; cytoskeleton organization [GO:0007010]; focal adhesion assembly [GO:0048041]; insulin receptor signaling pathway [GO:0008286]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of glycogen biosynthetic process [GO:0045725]; positive regulation of insulin receptor signaling pathway [GO:0046628]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of protein localization to plasma membrane [GO:1903078]; regulation of skeletal muscle acetylcholine-gated channel clustering [GO:1904393]; stress fiber assembly [GO:0043149]	hit with GO BP
GN011772	Chromosome_5A	16385	5	501	37.339029600244125	0.8772990949981068	1.3695482329151156	500	0	1.0112796577207313	131	0	1.4175526370648321	369	0	0.6475984889368591	63	0	unmethylated (<10%)	Q91YE8	Synaptopodin-2 (Myopodin)	autophagosome assembly [GO:0000045]; chaperone-mediated autophagy [GO:0061684]; positive regulation of actin filament bundle assembly [GO:0032233]; positive regulation of cell migration [GO:0030335]; regulation of Rho protein signal transduction [GO:0035023]	hit with GO BP
GN011773	Chromosome_5A	3048	3	82	38.35301837270341	0.7316670472309557	1.2528188423953897	82	0	0.9672619047619048	25	0	1.3978088401964488	57	0	0.4517453798767967	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011774	Chromosome_5A	258	1	11	51.55038759689923	0.683855421686747	0.22727272727272727	11	0	0.22727272727272727	11	0	NA	NA	NA	0.36518563603164944	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011775	Chromosome_5A	372	1	19	52.1505376344086	0.7515151515151515	1.2254901960784315	19	0	1.2254901960784315	19	0	NA	NA	NA	0.7476635514018691	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011776	Chromosome_5A	567	1	26	42.504409171075835	1.017391304347826	1.0554089709762533	10	0	1.0554089709762533	10	0	NA	NA	NA	1.0638297872340425	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011777	Chromosome_5A	1302	3	49	42.473118279569896	0.8416400622674863	31.086142322097377	49	0.22448979591836735	28.186453022578295	46	0.1956521739130435	48.47161572052402	3	0.6666666666666666	6.4591896652965355	66	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011778	Chromosome_5A	11396	22	314	35.63531063531064	0.8679457083992477	0.8534075777750878	313	0	0.6357388316151202	123	0	0.9717809755185947	190	0	0.3374578177727784	51	0	unmethylated (<10%)	Q8IVF7	Formin-like protein 3 (Formin homology 2 domain-containing protein 3) (WW domain-binding protein 3) (WBP-3)	actin cytoskeleton organization [GO:0030036]; cell migration [GO:0016477]; cortical actin cytoskeleton organization [GO:0030866]; filopodium assembly [GO:0046847]; regulation of cell shape [GO:0008360]	hit with GO BP
GN011779	Chromosome_5A	1113	1	44	40.521114106019766	0.9632951729021598	0.5720228809152366	44	0	0.5720228809152366	44	0	NA	NA	NA	2.4907260201377848	40	0	unmethylated (<10%)	P02711	Acetylcholine receptor subunit alpha	NA	hit, no GO BP
GN011780	Chromosome_5A	594	1	19	42.08754208754209	0.7224889571730363	0.3683241252302026	19	0	0.3683241252302026	19	0	NA	NA	NA	0.341796875	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011781	Chromosome_5A	321	1	12	54.205607476635514	0.5725326991676576	0.9216589861751152	12	0	0.9216589861751152	12	0	NA	NA	NA	0.32320620555914675	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011782	Chromosome_5A	7268	14	141	35.15410016510732	0.6279476753163673	1.1299435028248588	141	0	1.0048510048510049	71	0	1.219815782922579	70	0	0.7210750573582432	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011783	Chromosome_5A	300	1	4	38.333333333333336	0.4048582995951417	0.38022813688212925	4	0	0.38022813688212925	4	0	NA	NA	NA	0.6997900629811057	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011785	Chromosome_5A	876	1	27	38.926940639269404	0.8597600872410033	2.542372881355932	15	0	2.542372881355932	15	0	NA	NA	NA	0.7763975155279503	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011786	Chromosome_5A	1047	1	39	41.73829990448902	0.8553204859656472	0.437636761487965	39	0	0.437636761487965	39	0	NA	NA	NA	0.818926296633303	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011787	Chromosome_5A	648	1	47	49.074074074074076	1.205128205128205	0.37174721189591076	47	0	0.37174721189591076	47	0	NA	NA	NA	0.37523452157598497	54	0	unmethylated (<10%)	Q66IC8	Dynein light chain Tctex-type 5 (Tctex1 domain-containing protein 1)	cilium assembly [GO:0060271]; microtubule-based movement [GO:0007018]	hit with GO BP
GN011788	Chromosome_5A	33657	30	375	35.0358023590932	0.37466107182298497	83.9648778824432	374	0.9385026737967914	91.14811568799298	59	1	82.73779818345145	315	0.926984126984127	88.37209302325581	15	1	methylated (>=50%)	B2RX14	Terminal uridylyltransferase 4 (TUTase 4) (EC 2.7.7.52) (Zinc finger CCHC domain-containing protein 11)	interleukin-6-mediated signaling pathway [GO:0070102]; miRNA catabolic process [GO:0010587]; miRNA metabolic process [GO:0010586]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; oocyte maturation [GO:0001556]; polyuridylation-dependent mRNA catabolic process [GO:1990074]; positive regulation of interleukin-6 production [GO:0032755]; pre-miRNA processing [GO:0031054]; regulation of lipopolysaccharide-mediated signaling pathway [GO:0031664]; RNA 3'-end processing [GO:0031123]; stem cell population maintenance [GO:0019827]; transposable element silencing by mRNA destabilization [GO:0141008]	hit with GO BP
GN011789	Chromosome_5A	7810	15	112	36.74775928297055	0.42573716259263966	84.92360461490489	112	0.9017857142857143	86.57851239669421	56	0.9107142857142857	83.44644437887283	56	0.8928571428571429	33.876543209876544	32	0.3125	methylated (>=50%)	Q7TT28	RNA exonuclease 1 homolog (EC 3.1.-.-) (Transcription elongation factor B polypeptide 3-binding protein 1)	rRNA 3'-end processing [GO:0031125]	hit with GO BP
GN011790	Chromosome_5A	32030	23	408	35.48236028723072	0.40793280507400653	84.53462461432979	407	0.8525798525798526	89.77375565610859	66	0.9545454545454546	83.31042503700571	341	0.8328445747800587	85.753093872623	42	0.9285714285714286	methylated (>=50%)	Q5TM68	Mediator of DNA damage checkpoint protein 1	DNA replication checkpoint signaling [GO:0000076]; protein localization to site of double-strand break [GO:1990166]	hit with GO BP
GN011791	Chromosome_5A	663	1	30	50.52790346907994	0.71172976454591	0.7352941176470589	30	0	0.7352941176470589	30	0	NA	NA	NA	2.277327935222672	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011792	Chromosome_5A	915	1	14	37.26775956284153	0.44712041884816756	65.44117647058823	14	0.7857142857142857	65.44117647058823	14	0.7857142857142857	NA	NA	NA	14.01129943502825	81	0.037037037037037035	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011793	Chromosome_5A	576	2	19	45.138888888888886	0.6522438762739138	10.043668122270743	15	0	10.92896174863388	13	0	6.521739130434782	2	0	9.187279151943462	15	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011794	Chromosome_5A	222	1	10	46.846846846846844	0.8671875	91.61073825503355	10	1	91.61073825503355	10	1	NA	NA	NA	70.52505966587113	28	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017550	Chromosome_5A	168	1	2	44.642857142857146	0.24633431085043989	79.41176470588235	2	1	79.41176470588235	2	1	NA	NA	NA	52.05549845837616	48	0.4583333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN011795	Chromosome_5A	3608	2	24	40.16075388026608	0.1654603126074827	73.77049180327869	24	0.75	74.15599534342259	21	0.7619047619047619	72.38493723849372	3	0.6666666666666666	80.8055693684734	24	0.9166666666666666	methylated (>=50%)	E1BD59	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]	hit with GO BP
GN011796	Chromosome_5A	1941	1	75	42.2462648119526	0.8661311914323963	0.7960199004975125	75	0	0.7960199004975125	75	0	NA	NA	NA	0.4968944099378882	53	0	unmethylated (<10%)	E1BD59	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; response to type I interferon [GO:0034340]	hit with GO BP
GN011797	Chromosome_5A	477	1	12	52.62054507337526	0.36650019208605455	47.5	10	0.4	47.5	10	0.4	NA	NA	NA	3.8140643623361146	14	0.07142857142857142	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011798	Chromosome_5A	9576	11	78	35.390559732665	0.2618071693708662	84.0724946695096	78	0.8717948717948718	96.27547434996487	24	1	78.75726966636057	54	0.8148148148148148	53.65058670143416	36	0.3888888888888889	methylated (>=50%)	Q0P5K1	Vasculin (GC-rich promoter-binding protein 1)	DNA-templated transcription [GO:0006351]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN011799	Chromosome_5A	7414	9	61	34.448340976530886	0.27750666531672913	73.23313079629037	61	0.819672131147541	64.44232602478552	22	0.7272727272727273	77.67083734359962	39	0.8717948717948718	64.27857380873043	47	0.6595744680851063	methylated (>=50%)	Q1HCL7	NAD kinase 2, mitochondrial (EC 2.7.1.23) (Mitochondrial NAD kinase) (NAD kinase domain-containing protein 1, mitochondrial)	NAD+ metabolic process [GO:0019674]; NADP+ biosynthetic process [GO:0006741]	hit with GO BP
GN011800	Chromosome_5A	3485	4	23	33.916786226685794	0.23034038823512507	76.58380112269447	23	0.8695652173913043	80.92592592592592	12	0.9166666666666666	73.26732673267327	11	0.8181818181818182	65.64971751412429	28	0.42857142857142855	methylated (>=50%)	Q7T0W5	Dimethyladenosine transferase 1, mitochondrial (EC 2.1.1.-) (Mitochondrial 12S rRNA dimethylase 1) (Mitochondrial transcription factor B1) (mtTFB1) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1)	rRNA methylation [GO:0031167]; transcription initiation at mitochondrial promoter [GO:0006391]	hit with GO BP
GN011801	Chromosome_5A	2280	1	30	40.08771929824562	0.3275156216332687	89.8858075040783	30	0.9666666666666667	89.8858075040783	30	0.9666666666666667	NA	NA	NA	84.74093264248705	38	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011802	Chromosome_5A	9910	8	135	33.713420787083756	0.48009017233509316	82.58952010920929	135	0.8962962962962963	90.1639344262295	20	1	81.60237388724036	115	0.8782608695652174	0.7674597083653109	39	0	methylated (>=50%)	A2BIJ3	BSD domain-containing protein 1	NA	hit, no GO BP
GN001984	Chromosome_5A	1108	2	30	38.808664259927795	0.7198544698544699	0.6535947712418301	9	0	0.6535947712418301	9	0	NA	NA	NA	0.5569996286669142	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011803	Chromosome_5A	25171	7	603	35.70775892892615	0.7536175158909929	3.5889780431672578	601	0	0.6997900629811057	73	0	3.8708356089568543	528	0	4.569093610698365	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011804	Chromosome_5A	1787	5	51	34.4711807498601	0.9608742408906883	27.861832714815872	50	0.04	26.572668112798265	28	0	29.29475587703436	22	0.09090909090909091	33.88510223953262	49	0.20408163265306123	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011805	Chromosome_5A	351	1	9	43.3048433048433	0.5876116071428571	41.29930394431555	9	0	41.29930394431555	9	0	NA	NA	NA	60.2112676056338	14	0.7857142857142857	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011806	Chromosome_5A	12686	11	178	36.82799936938357	0.41397572399662896	83.05084745762711	178	0.898876404494382	84.62177888611804	56	0.8928571428571429	82.51350582883138	122	0.9016393442622951	91.14043355325165	24	1	methylated (>=50%)	P98081	Protein disabled	cellularization [GO:0007349]; clathrin-dependent endocytosis [GO:0072583]; compound eye photoreceptor development [GO:0042051]; dorsal closure [GO:0007391]; motor neuron axon guidance [GO:0008045]; mushroom body development [GO:0016319]; positive regulation of sevenless signaling pathway [GO:0045874]; receptor-mediated endocytosis [GO:0006898]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN011807	Chromosome_5A	3043	7	36	34.30824843904042	0.40654793493629826	50.16136468418626	36	0.5555555555555556	75.28089887640449	21	0.8095238095238095	16.251354279523294	15	0.2	0.7313317936874519	42	0	methylated (>=50%)	P14211	Calreticulin (CRP55) (Calregulin) (Endoplasmic reticulum resident protein 60) (ERp60) (HACBP)	cardiac muscle cell differentiation [GO:0055007]; cellular response to electrical stimulus [GO:0071257]; cellular response to lithium ion [GO:0071285]; cellular response to virus [GO:0098586]; cellular senescence [GO:0090398]; cortical actin cytoskeleton organization [GO:0030866]; ERAD pathway [GO:0036503]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of intracellular steroid hormone receptor signaling pathway [GO:0033144]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of retinoic acid receptor signaling pathway [GO:0048387]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of translation [GO:0017148]; negative regulation of trophoblast cell migration [GO:1901164]; peptide antigen assembly with MHC class I protein complex [GO:0002502]; positive regulation of cell cycle [GO:0045787]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of dendritic cell chemotaxis [GO:2000510]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of gene expression [GO:0010628]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of phagocytosis [GO:0050766]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; protein export from nucleus [GO:0006611]; protein folding [GO:0006457]; protein localization to nucleus [GO:0034504]; protein maturation [GO:0051604]; protein stabilization [GO:0050821]; regulation of meiotic nuclear division [GO:0040020]; response to biphenyl [GO:1904614]; response to estradiol [GO:0032355]; response to glycoside [GO:1903416]; response to peptide [GO:1901652]; response to testosterone [GO:0033574]; response to xenobiotic stimulus [GO:0009410]; spermatogenesis [GO:0007283]	hit with GO BP
GN011808	Chromosome_5A	3020	5	21	33.64238410596027	0.2467944352563479	91.72141918528253	21	1	92.27642276422765	4	1	91.61442006269593	17	1	59.96607294317218	17	0.7058823529411765	methylated (>=50%)	Q3T0Q2	Transmembrane protein 59	positive regulation of autophagy [GO:0010508]	hit with GO BP
GN011809	Chromosome_5A	37412	22	441	35.4511921308671	0.3758357883810244	82.52936316942639	440	0.9363636363636364	84.7684515195369	51	0.9411764705882353	82.28256968536907	389	0.9357326478149101	0.718562874251497	58	0	methylated (>=50%)	A0JN80	DIS3-like exonuclease 1 (EC 3.1.13.1)	gene expression [GO:0010467]; mRNA catabolic process [GO:0006402]; rRNA catabolic process [GO:0016075]	hit with GO BP
GN011810	Chromosome_5A	16481	19	200	35.93228566227778	0.37626582480774623	72.27754321676093	184	0.8695652173913043	69.47250280583614	17	0.7647058823529411	72.4918538844109	167	0.8802395209580839	50.47258979206049	49	0.4489795918367347	methylated (>=50%)	Q91754	Glucokinase regulatory protein (GKRP) (Glucokinase regulator)	carbohydrate derivative metabolic process [GO:1901135]; intracellular glucose homeostasis [GO:0001678]; negative regulation of glucokinase activity [GO:0033132]; protein localization to nucleus [GO:0034504]; response to fructose [GO:0009750]	hit with GO BP
GN011811	Chromosome_5A	8750	11	92	32.857142857142854	0.3901467824279828	68.90612878200155	92	0.8260869565217391	63.36805555555556	21	0.7142857142857143	70.11146797657283	71	0.8591549295774648	88.15584415584415	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011812	Chromosome_5A	480	1	19	45.208333333333336	0.7806882383153569	0.21436227224008575	19	0	0.21436227224008575	19	0	NA	NA	NA	0.451849759954815	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011813	Chromosome_5A	627	1	20	40.5103668261563	0.7900207900207901	0.36968576709796674	20	0	0.36968576709796674	20	0	NA	NA	NA	0.4010312231452306	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011814	Chromosome_5A	501	1	22	45.908183632734534	0.8459590145061018	0.7756563245823389	22	0	0.7756563245823389	22	0	NA	NA	NA	1.1217282924802658	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011815	Chromosome_5A	5054	8	39	32.56826276216858	0.2961038961038961	80.007204610951	39	0.9230769230769231	69.79591836734694	7	0.8571428571428571	82.19597550306212	32	0.9375	80.2710843373494	25	0.92	methylated (>=50%)	Q9D7H3	RNA 3'-terminal phosphate cyclase (RNA cyclase) (RNA-3'-phosphate cyclase) (EC 6.5.1.4) (RNA terminal phosphate cyclase domain-containing protein 1)	negative regulation of optical nerve axon regeneration [GO:1905592]; RNA processing [GO:0006396]	hit with GO BP
GN011816	Chromosome_5A	2007	2	82	40.40857000498256	1.0160143227558958	1.423299947285187	82	0	1.2820512820512822	37	0	1.521933751119069	45	0	22.440944881889763	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011817	Chromosome_5A	2055	3	56	33.236009732360095	0.9947100923140753	0.6022518984027232	55	0	0.458295142071494	18	0	0.6598240469208211	37	0	0.6036217303822937	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011818	Chromosome_5A	3298	4	94	33.47483323226198	1.0188948376897617	0.6677140612725845	94	0	0.9923664122137404	27	0	0.5552617662612375	67	0	0.7467752885268161	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011819	Chromosome_5A	1418	4	45	36.81241184767278	0.9370594454887218	0.8581524482584554	44	0	1.1647254575707155	30	0	0.3851091142490372	14	0	1.933064050778996	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011820	Chromosome_5A	414	1	6	43.71980676328502	0.3101898101898102	0	6	0	0	6	0	NA	NA	NA	0.8257279443720121	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011821	Chromosome_5A	14761	22	384	36.25770611747171	0.7915436096341629	0.5253940455341506	384	0	0.6606606606606606	167	0	0.45475929120275993	217	0	0.5558643690939411	52	0	unmethylated (<10%)	P13508	Protein glp-1 [Cleaved into: glp-1/Notch intracellular domain]	cell fate specification [GO:0001708]; cellularization [GO:0007349]; cytoplasmic streaming [GO:0099636]; embryonic pattern specification [GO:0009880]; maintenance of dauer [GO:0043055]; negative regulation of stem cell differentiation [GO:2000737]; nematode larval development [GO:0002119]; nematode pharyngeal muscle development [GO:0160096]; Notch signaling pathway [GO:0007219]; oocyte growth [GO:0001555]; positive regulation of gene expression [GO:0010628]; positive regulation of germ cell proliferation [GO:1905938]; positive regulation of stem cell proliferation [GO:2000648]; positive regulation of transcription by RNA polymerase II [GO:0045944]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of gene expression [GO:0010468]; regulation of germ cell proliferation [GO:1905936]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011822	Chromosome_5A	4580	3	109	34.69432314410481	0.7934706592917541	0.7761338830948339	98	0	0.5208333333333334	45	0	0.9986382206082615	53	0	2.1862139917695473	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011823	Chromosome_5A	1723	2	60	39.408009286128845	0.8972556371400302	1.1434511434511434	60	0	0.6195786864931846	57	0	3.870967741935484	3	0	0.9687836383207751	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011824	Chromosome_5A	3718	6	86	36.28294782140936	0.7074383822293022	40.82519001085776	72	0.4305555555555556	40.27355623100304	28	0.35714285714285715	41.13175675675676	44	0.4772727272727273	75.44022242817424	43	0.7906976744186046	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011825	Chromosome_5A	14922	9	152	34.40557566009918	0.3448054435667767	75.7938026013772	151	0.8874172185430463	77.77777777777777	10	0.8	75.68195595069712	141	0.8936170212765957	7.380281690140845	46	0.10869565217391304	methylated (>=50%)	Q5RA23	Nuclear transcription factor Y subunit gamma (CAAT box DNA-binding protein subunit C) (Nuclear transcription factor Y subunit C) (NF-YC)	NA	hit, no GO BP
GN011826	Chromosome_5A	14043	16	173	35.09221676279997	0.40055302271379795	89.0061475409836	173	0.9595375722543352	90.67894131185271	29	0.9655172413793104	88.64372974320618	144	0.9583333333333334	64.47543160690572	19	0.7894736842105263	methylated (>=50%)	Q9VQZ6	Elongator complex protein 3 (EC 2.3.1.311) (EC 2.3.1.48) (tRNA uridine(34) acetyltransferase)	cytoskeletal matrix organization at active zone [GO:0048789]; establishment of mitotic spindle asymmetry [GO:0061867]; hemopoiesis [GO:0030097]; instar larval development [GO:0002168]; locomotory behavior [GO:0007626]; long-term memory [GO:0007616]; regulation of photoreceptor cell axon guidance [GO:2000289]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of translation [GO:0006417]; sleep [GO:0030431]; synapse organization [GO:0050808]; synaptic assembly at neuromuscular junction [GO:0051124]; tRNA modification [GO:0006400]; tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation [GO:0002926]; tRNA wobble uridine modification [GO:0002098]	hit with GO BP
GN011827	Chromosome_5A	9014	4	144	34.579542933215	0.5349616629272016	78.205858885216	143	0.8181818181818182	67.27272727272727	9	0.6666666666666666	78.93712756901374	134	0.8283582089552238	62.9040404040404	54	0.5925925925925926	methylated (>=50%)	Q9DAT2	MRG/MORF4L-binding protein (MRG-binding protein)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of double-strand break repair [GO:2000779]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011830	Chromosome_5A	9323	4	125	33.66941971468412	0.47319531033653867	60.26090868196131	122	0.7868852459016393	53.82103200522534	19	0.8421052631578947	61.28964941569282	103	0.7766990291262136	0.5857294994675186	64	0	methylated (>=50%)	Q92968	Peroxisomal membrane protein PEX13 (Peroxin-13)	cellular response to reactive oxygen species [GO:0034614]; cerebral cortex cell migration [GO:0021795]; fatty acid alpha-oxidation [GO:0001561]; locomotory behavior [GO:0007626]; microtubule-based peroxisome localization [GO:0060152]; neuron migration [GO:0001764]; protein import into peroxisome matrix, docking [GO:0016560]; protein import into peroxisome matrix, translocation [GO:0016561]; suckling behavior [GO:0001967]	hit with GO BP
GN011828	Chromosome_5A	19725	28	351	35.06210392902408	0.580129801736248	81.83178557281809	324	0.9382716049382716	69.89096025325361	55	0.8	83.53959150820002	269	0.966542750929368	2.187902187902188	36	0	methylated (>=50%)	Q5R5P0	WASH complex subunit 5 (WASH complex subunit strumpellin)	actin filament polymerization [GO:0030041]; endosome fission [GO:0140285]; endosome organization [GO:0007032]; regulation of actin nucleation [GO:0051125]	hit with GO BP
GN011836	Chromosome_5A	48709	63	533	35.6320187234392	0.34742306131756323	87.09355558164104	528	0.9621212121212122	90.31855955678671	134	0.9701492537313433	86.22654155495978	394	0.9593908629441624	42.37782640408461	27	0.5925925925925926	methylated (>=50%)	P12270	Nucleoprotein TPR (Megator) (NPC-associated intranuclear protein) (Translocated promoter region protein)	cellular response to heat [GO:0034605]; cellular response to interferon-alpha [GO:0035457]; mitotic spindle assembly checkpoint signaling [GO:0007094]; mRNA export from nucleus in response to heat stress [GO:0031990]; negative regulation of RNA export from nucleus [GO:0046832]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of translational initiation [GO:0045947]; nuclear pore organization [GO:0006999]; nucleocytoplasmic transport [GO:0006913]; positive regulation of heterochromatin formation [GO:0031453]; positive regulation of intracellular protein transport [GO:0090316]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of protein export from nucleus [GO:0046827]; positive regulation of protein import into nucleus [GO:0042307]; protein import into nucleus [GO:0006606]; regulation of mitotic sister chromatid separation [GO:0010965]; regulation of mitotic spindle assembly [GO:1901673]; regulation of protein localization [GO:0032880]; response to epidermal growth factor [GO:0070849]; RNA export from nucleus [GO:0006405]; RNA import into nucleus [GO:0006404]	hit with GO BP
GN011837	Chromosome_5A	2295	5	26	37.9520697167756	0.31531388712745717	67.62820512820512	26	0.7692307692307693	69.61271102284012	23	0.782608695652174	59.33609958506224	3	0.6666666666666666	49.504950495049506	50	0.48	methylated (>=50%)	Q9UIF3	Tektin-2 (Tektin-t) (Testicular tektin) (Testicular tektin B1-like protein) (TEKTB1) (Tektin-B1)	cilium assembly [GO:0060271]; cilium movement involved in cell motility [GO:0060294]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN011838	Chromosome_5A	25764	7	700	34.78885266263003	0.8987144777107866	1.4966319657072873	697	0	1.2171372930866602	53	0	1.5114389621108562	644	0	0.6045179764556157	61	0	unmethylated (<10%)	P34056	Transcription factor AP-2-alpha (AP2-alpha) (AP-2 transcription factor) (Activating enhancer-binding protein 2-alpha) (Activator protein 2) (AP-2)	anterior neuropore closure [GO:0021506]; basement membrane organization [GO:0071711]; bone morphogenesis [GO:0060349]; cellular response to iron ion [GO:0071281]; cornea development in camera-type eye [GO:0061303]; embryonic body morphogenesis [GO:0010172]; embryonic camera-type eye morphogenesis [GO:0048596]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic forelimb morphogenesis [GO:0035115]; embryonic pattern specification [GO:0009880]; epidermis morphogenesis [GO:0048730]; eyelid development in camera-type eye [GO:0061029]; face morphogenesis [GO:0060325]; forebrain neuron development [GO:0021884]; forelimb morphogenesis [GO:0035136]; inner ear morphogenesis [GO:0042472]; keratinocyte development [GO:0003334]; kidney development [GO:0001822]; lens induction in camera-type eye [GO:0060235]; lens morphogenesis in camera-type eye [GO:0002089]; metanephric nephron development [GO:0072210]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; neural crest cell development [GO:0014032]; neural tube closure [GO:0001843]; oculomotor nerve formation [GO:0021623]; optic cup structural organization [GO:0003409]; optic vesicle morphogenesis [GO:0003404]; outflow tract morphogenesis [GO:0003151]; positive regulation of bone mineralization [GO:0030501]; positive regulation of cell migration [GO:0030335]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of tooth mineralization [GO:0070172]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; regulation of neuron differentiation [GO:0045664]; regulation of transcription by RNA polymerase II [GO:0006357]; response to lipopolysaccharide [GO:0032496]; roof of mouth development [GO:0060021]; sensory organ development [GO:0007423]; sensory perception of sound [GO:0007605]; skeletal system development [GO:0001501]; skeletal system morphogenesis [GO:0048705]; skin development [GO:0043588]; sympathetic nervous system development [GO:0048485]; trigeminal nerve development [GO:0021559]	hit with GO BP
GN011839	Chromosome_5A	365	1	0	40.273972602739725	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8923884514435696	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011840	Chromosome_5A	591	2	16	41.28595600676819	0.6374115267947421	3.971631205673759	16	0	4.153846153846154	15	0	1.8181818181818181	1	0	7.0627062706270625	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011841	Chromosome_5A	6332	7	46	33.33859759949463	0.26189097526677146	78.01680672268908	46	0.8695652173913043	80.65522620904837	10	0.9	77.29220222793488	36	0.8611111111111112	41.09165808444902	16	0.5625	methylated (>=50%)	Q1L987	ATP synthase mitochondrial F1 complex assembly factor 1	mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]	hit with GO BP
GN011843	Chromosome_5A	1894	2	68	39.65153115100317	0.9142743561348212	3.2418952618453867	67	0	0.26455026455026454	18	0	4.606060606060606	49	0	0.5687203791469194	33	0	unmethylated (<10%)	P49683	Prolactin-releasing peptide receptor (PrRP receptor) (PrRPR) (G protein-coupled receptor 10) (hGR3)	feeding behavior [GO:0007631]; female pregnancy [GO:0007565]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN011849	Chromosome_5A	18713	14	387	34.500080158178804	0.6963326228596005	2.3395883777239708	381	0	2.1165012174564524	67	0	2.382585466228656	314	0	0.6369426751592356	44	0	unmethylated (<10%)	F8W3R9	ALK tyrosine kinase receptor (EC 2.7.10.1) (Anaplastic lymphoma kinase 2) (alk-2) (Anaplastic lymphoma kinase homolog)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; nervous system development [GO:0007399]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of neurogenesis [GO:0050769]; protein N-linked glycosylation [GO:0006487]; regulation of cell population proliferation [GO:0042127]; regulation of neuron differentiation [GO:0045664]	hit with GO BP
GN011850	Chromosome_5A	3187	3	32	32.60119234389708	0.37872846108140223	57.60082730093071	32	0.59375	56.666666666666664	11	0.6363636363636364	57.90921595598349	21	0.5714285714285714	45.77325417020074	37	0.40540540540540543	methylated (>=50%)	Q08DI6	RING finger protein 11	protein autoubiquitination [GO:0051865]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN011851	Chromosome_5A	26103	23	187	35.536145270658544	0.22901764425369575	69.14998653621757	172	0.7616279069767442	53.150242326332794	34	0.6176470588235294	72.35028005170186	138	0.7971014492753623	12.747875354107649	36	0.1388888888888889	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011852	Chromosome_5A	13956	7	356	35.81971911722557	0.796037003604035	0.7454739084132055	356	0	1.4907573047107932	40	0	0.6681514476614699	316	0	0.8795669824086604	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011855	Chromosome_5A	5592	5	127	35.24678111587983	0.7325985863479003	16.038596948754726	126	0.1111111111111111	73.63957597173145	17	0.7058823529411765	3.0060761112887753	109	0.01834862385321101	0.5329780146568954	35	0	sparse (10-50%)	Q8AWB5	GDP-fucose protein O-fucosyltransferase 3 (EC 2.4.1.221) (Fucosyltransferase X) (Fuc-TX) (FucT-X) (Galactoside 3-L-fucosyltransferase 10) (Fucosyltransferase 10)	N-glycan processing [GO:0006491]; positive regulation of protein secretion [GO:0050714]	hit with GO BP
GN011856	Chromosome_5A	4292	4	138	41.12301957129543	0.7903666162259105	0.6329113924050633	56	0	0.36101083032490977	15	0	0.7237635705669482	41	0	0.33407572383073497	44	0	unmethylated (<10%)	Q8AWB5	GDP-fucose protein O-fucosyltransferase 3 (EC 2.4.1.221) (Fucosyltransferase X) (Fuc-TX) (FucT-X) (Galactoside 3-L-fucosyltransferase 10) (Fucosyltransferase 10)	N-glycan processing [GO:0006491]; positive regulation of protein secretion [GO:0050714]	hit with GO BP
GN011857	Chromosome_5A	2481	3	68	34.98589278516727	0.8969059011164274	0.43233895373973197	67	0	0.4661016949152542	37	0	0.3971756398940865	30	0	0.3536067892503536	31	0	unmethylated (<10%)	P69478	Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O-sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4S-1) (C4ST-1) (C4ST1)	carbohydrate biosynthetic process [GO:0016051]; cartilage development [GO:0051216]; chondrocyte development [GO:0002063]; chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; chondroitin sulfate proteoglycan metabolic process [GO:0050654]; developmental growth [GO:0048589]; embryonic digit morphogenesis [GO:0042733]; embryonic limb morphogenesis [GO:0030326]; embryonic skeletal system morphogenesis [GO:0048704]; embryonic viscerocranium morphogenesis [GO:0048703]; in utero embryonic development [GO:0001701]; negative regulation of apoptotic process [GO:0043066]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; polysaccharide localization [GO:0033037]; post-anal tail morphogenesis [GO:0036342]; post-embryonic development [GO:0009791]; proteoglycan biosynthetic process [GO:0030166]; regulation of cell population proliferation [GO:0042127]; respiratory gaseous exchange by respiratory system [GO:0007585]	hit with GO BP
GN011858	Chromosome_5A	21210	14	237	33.47949080622348	0.39952487189901026	52.48778142777021	235	0.5574468085106383	41.91890348372359	38	0.42105263157894735	54.212488350419385	197	0.583756345177665	9.538092381523695	41	0	methylated (>=50%)	Q920G9	Germ cell-less protein-like 1 (mGcl-1) (DP-interacting protein) (DIP)	germ cell development [GO:0007281]; regulation of DNA-templated transcription [GO:0006355]; spermatogenesis [GO:0007283]	hit with GO BP
GN011860	Chromosome_5A	13593	14	277	36.9675568307217	0.5966754880831643	61.99748278670319	248	0.7983870967741935	79.94670219853431	27	0.8888888888888888	59.75345660503082	221	0.7873303167420814	79.85185185185185	10	0.9	methylated (>=50%)	Q499S9	Inactive rhomboid protein 1 (iRhom1) (Rhomboid family member 1)	cell migration [GO:0016477]; cell population proliferation [GO:0008283]; chaperone-mediated protein complex assembly [GO:0051131]; negative regulation of protein secretion [GO:0050709]; regulation of epidermal growth factor receptor signaling pathway [GO:0042058]; regulation of proteasomal protein catabolic process [GO:0061136]; regulation of protein secretion [GO:0050708]	hit with GO BP
GN011861	Chromosome_5A	1683	1	0	41.29530600118835	0	NA	0	NA	NA	NA	NA	NA	NA	NA	83.29258353708231	17	0.8823529411764706	NA	NA	NA	NA	no Swiss-Prot hit
GN011862	Chromosome_5A	2703	3	17	34.92415834258232	0.21300433879700365	87.38512949039264	17	0.8823529411764706	90.99462365591398	11	0.9090909090909091	81.45695364238411	6	0.8333333333333334	83.69441277080958	50	0.78	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011863	Chromosome_5A	23608	15	267	34.44595052524568	0.38152712998728733	45.04645760743322	266	0.4473684210526316	38.1486093814861	43	0.46511627906976744	46.1683883600027	223	0.4439461883408072	67.67574840228725	48	0.8125	sparse (10-50%)	Q6INU8	Intraflagellar transport protein 70A (Tetratricopeptide repeat protein 30A) (TPR repeat protein 30A)	intraciliary transport [GO:0042073]; protein polyglutamylation [GO:0018095]	hit with GO BP
GN011864	Chromosome_5A	38076	7	1093	35.46328395839899	0.9137431558845868	3.021542291553735	928	0	12.251795521757499	33	0	2.5610218793474138	895	0	0.6771314250538627	54	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN011865	Chromosome_5A	31442	14	575	35.0772851599771	0.5989535709647581	44.865442245497434	568	0.47007042253521125	16.512199735199545	114	0.20175438596491227	50.140765765765764	454	0.5374449339207048	0.6566946369937979	37	0	sparse (10-50%)	P81018	Ladderlectin	NA	hit, no GO BP
GN011866	Chromosome_5A	342	1	19	48.24561403508772	0.967540202501489	0.54421768707483	19	0	0.54421768707483	19	0	NA	NA	NA	0.5070626584570808	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011869	Chromosome_5A	3155	4	35	35.847860538827256	0.34556407447973714	2.8678304239401498	22	0	0	8	0	4.18943533697632	14	0	3.2045240339302543	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011868	Chromosome_5A	1000	2	11	36.5	0.33029065577708383	4.438280166435506	10	0	4.507042253521127	9	0	0	1	0	1.929660753190165	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011867	Chromosome_5A	45291	2	1133	36.42666313395598	0.7541538443359845	1.3514105484492729	1116	0	0.27991602519244224	30	0	1.3860311574377642	1086	0	0.5389382915656158	65	0	unmethylated (<10%)	P25931	RYamide receptor (Neuropeptide Y-like receptor) (NPY-R)	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN011871	Chromosome_5A	1108	2	28	39.711191335740075	0.6548463356973995	0.9828009828009828	27	0	1.1173184357541899	11	0	0.8771929824561403	16	0	0.7936507936507936	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011872	Chromosome_5A	766	2	18	40.992167101827675	0.5922680412371134	7.948243992606285	18	0	7.948243992606285	18	0	NA	NA	NA	14.87753250680375	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011873	Chromosome_5A	32210	39	431	35.24371313256753	0.4311765400872608	57.62060069123302	393	0.6005089058524173	53.719655442443226	103	0.5922330097087378	58.91156462585034	290	0.603448275862069	4.340473506200676	53	0	methylated (>=50%)	A6NCI4	von Willebrand factor A domain-containing protein 3A	NA	hit, no GO BP
GN011874	Chromosome_5A	1251	1	52	42.84572342126299	0.9060293318848452	0.5215123859191656	52	0	0.5215123859191656	52	0	NA	NA	NA	0.7160759040458289	46	0	unmethylated (<10%)	C3ZQF9	QRFP-like peptide receptor	cellular response to hormone stimulus [GO:0032870]; cellular response to peptide [GO:1901653]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN011875	Chromosome_5A	1077	1	33	39.27576601671309	0.7948872785829307	0.5776173285198556	33	0	0.5776173285198556	33	0	NA	NA	NA	1.2653374233128833	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011876	Chromosome_5A	9126	7	150	35.459127766820075	0.5229289983210804	77.41179915092958	120	0.8416666666666667	75.50769230769231	32	0.8125	78.00614675374568	88	0.8522727272727273	80.64768869156438	43	0.9767441860465116	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011877	Chromosome_5A	567	1	21	41.7989417989418	0.8627010578177076	20.970042796005707	21	0	20.970042796005707	21	0	NA	NA	NA	27.424982554082344	41	0.024390243902439025	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011880	Chromosome_5A	5456	2	136	35.79545454545455	0.7786499215070644	0.9619084263178146	136	0	0.19723865877712032	12	0	1.0150891632373114	124	0	0.6339144215530903	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011881	Chromosome_5A	1267	3	22	35.201262825572215	0.5843115881267819	0.5856515373352855	19	0	0.6896551724137931	15	0	0.4032258064516129	4	0	0.6362942224484601	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011883	Chromosome_5A	620	3	9	37.58064516129032	0.4176021553659632	0.6458557588805167	9	0	0.5903187721369539	8	0	1.2195121951219512	1	0	2.2375215146299485	16	0	unmethylated (<10%)	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN011882	Chromosome_5A	567	1	12	44.620811287477956	0.425515947467167	1.3513513513513513	12	0	1.3513513513513513	12	0	NA	NA	NA	0.9863429438543247	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011886	Chromosome_5A	7231	4	236	37.38072189185451	0.9354381087279696	0.4151465593156372	234	0	0.3414911781445646	39	0	0.424298140159819	195	0	0.5399568034557235	28	0	unmethylated (<10%)	Q6ZUK4	Transmembrane protein 26	NA	hit, no GO BP
GN011885	Chromosome_5A	2100	1	21	37.04761904761905	0.303970223325062	77.48776508972267	21	0.9523809523809523	77.48776508972267	21	0.9523809523809523	NA	NA	NA	91.11310592459606	17	1	methylated (>=50%)	Q29RM5	Protein fem-1 homolog A (FEM1a) (FEM1-alpha)	negative regulation of inflammatory response [GO:0050728]; positive regulation of inflammatory response [GO:0050729]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN011884	Chromosome_5A	366	1	14	46.721311475409834	0.7162426614481409	83.56164383561644	14	1	83.56164383561644	14	1	NA	NA	NA	0.9012256669069935	50	0	methylated (>=50%)	Q90596	Transcription factor MafK	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011894	Chromosome_5A	19153	19	539	35.40959640787344	0.8983851641486826	0.895162678602169	533	0	0.791817881887166	152	0	0.9224209198102946	381	0	0.6923076923076923	24	0	unmethylated (<10%)	E1BMV3	Matrilin-1 (Cartilage matrix protein)	extracellular matrix organization [GO:0030198]	hit with GO BP
GN011893	Chromosome_5A	1400	4	45	39.285714285714285	0.8355437665782494	0.25806451612903225	45	0	0.28735632183908044	40	0	0	5	0	0.44785668586052463	54	0	unmethylated (<10%)	O35161	Cadherin EGF LAG seven-pass G-type receptor 1	anterior/posterior pattern specification [GO:0009952]; apical protein localization [GO:0045176]; axonogenesis [GO:0007409]; cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion mediated by cadherin [GO:0044331]; establishment of body hair planar orientation [GO:0048105]; establishment of planar polarity [GO:0001736]; establishment of planar polarity of embryonic epithelium [GO:0042249]; hair follicle development [GO:0001942]; homophilic cell-cell adhesion [GO:0007156]; inner ear morphogenesis [GO:0042472]; lateral sprouting involved in lung morphogenesis [GO:0060490]; locomotory behavior [GO:0007626]; neural tube closure [GO:0001843]; neuron migration [GO:0001764]; orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis [GO:0060488]; planar dichotomous subdivision of terminal units involved in lung branching morphogenesis [GO:0060489]; protein localization involved in establishment of planar polarity [GO:0090251]; regulation of actin cytoskeleton organization [GO:0032956]; Rho protein signal transduction [GO:0007266]; wound healing [GO:0042060]	hit with GO BP
GN011892	Chromosome_5A	420	2	17	44.76190476190476	0.8095238095238095	0.37105751391465674	17	0	0.437636761487965	15	0	0	2	0	0.6565126050420168	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011891	Chromosome_5A	11823	13	152	34.86424765287998	0.4242379174784475	85.94960049170253	113	0.9911504424778761	85	24	1	86.1203770848441	89	0.9887640449438202	93.79118094272681	76	0.9868421052631579	methylated (>=50%)	Q5ZLN0	Leucine-rich repeat-containing protein 40	NA	hit, no GO BP
GN011890	Chromosome_5A	10654	9	144	39.59076403228834	0.3473696222754764	49.72375690607735	55	0.5454545454545454	60.278745644599304	25	0.84	42.79176201372998	30	0.3	1.3157894736842106	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011889	Chromosome_5A	1061	5	31	40.433553251649386	0.7277091906721537	0	6	0	0	6	0	NA	NA	NA	0.6802721088435374	34	0	unmethylated (<10%)	P41243	Megakaryocyte-associated tyrosine-protein kinase (EC 2.7.10.2) (Protein kinase BATK) (Tyrosine-protein kinase CTK)	NA	hit, no GO BP
GN011888	Chromosome_5A	4371	6	115	36.94806680393503	0.7716023798997937	0.7114273010226767	79	0	0.7863695937090432	41	0	0.6729475100942126	38	0	0.5359056806002144	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011887	Chromosome_5A	1011	1	96	46.48862512363996	1.757496740547588	0.2386634844868735	36	0	0.2386634844868735	36	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011895	Chromosome_5A	14229	20	349	35.6314568838288	0.7727789798283737	0.6502182239244678	268	0	0.320659642693541	134	0	0.859932954379828	134	0	0.8685581933989577	118	0	unmethylated (<10%)	P18461	Fibroblast growth factor receptor 2 (FGFR-2) (EC 2.7.10.1) (Tyrosine kinase receptor CEK3)	angiogenesis [GO:0001525]; animal organ development [GO:0048513]; fibroblast growth factor receptor signaling pathway [GO:0008543]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of cell differentiation [GO:0045595]; skeletal system development [GO:0001501]	hit with GO BP
GN011896	Chromosome_5A	31986	12	264	34.41193021947102	0.28087469827180467	75.41161325293042	258	0.7945736434108527	78.81087919038583	28	0.8214285714285714	75.00379420245865	230	0.7913043478260869	25.997842502696873	17	0.058823529411764705	methylated (>=50%)	P62025	Phosphatase and actin regulator 2	actin cytoskeleton organization [GO:0030036]	hit with GO BP
GN011897	Chromosome_5A	7464	7	66	33.77545551982851	0.310812805923705	89.69167050161067	66	0.9242424242424242	83.91608391608392	9	0.8888888888888888	90.56703762586116	57	0.9298245614035088	14.15929203539823	36	0.3888888888888889	methylated (>=50%)	Q9JI92	Syntenin-1 (Syndecan-binding protein 1)	negative regulation of receptor internalization [GO:0002091]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell growth [GO:0030307]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of exosomal secretion [GO:1903543]; positive regulation of extracellular exosome assembly [GO:1903553]; positive regulation of phosphorylation [GO:0042327]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; presynapse assembly [GO:0099054]; Ras protein signal transduction [GO:0007265]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN011898	Chromosome_5A	19638	10	231	34.025868214685815	0.4067108147820607	77.87491593813047	189	0.8624338624338624	80.99891422366993	36	0.8888888888888888	77.30256614282872	153	0.8562091503267973	NA	NA	NA	methylated (>=50%)	P27447	Tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes)	tissue development [GO:0009888]	hit with GO BP
GN011899	Chromosome_5A	30549	32	331	34.48230711316246	0.3651730306299919	85.11311986108983	329	0.9422492401215805	90.86744043982895	65	0.9846153846153847	83.95780952964985	264	0.9318181818181818	84.45121951219512	12	1	methylated (>=50%)	Q69ZJ7	Guanine nucleotide exchange factor subunit RIC1 (Protein RIC1 homolog) (RAB6A-GEF complex partner protein 1)	cranial skeletal system development [GO:1904888]; intracellular protein transport [GO:0006886]; negative regulation of protein catabolic process [GO:0042177]; positive regulation of GTPase activity [GO:0043547]; regulation of extracellular matrix constituent secretion [GO:0003330]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN011900	Chromosome_5A	941	3	8	35.06907545164719	0.28151527616768257	86.58280922431865	8	1	86.58280922431865	8	1	NA	NA	NA	50.42553191489362	17	0.5882352941176471	methylated (>=50%)	A2VDD2	Dynein light chain Tctex-type 5-B (Tctex1 domain-containing protein 1-B)	microtubule-based movement [GO:0007018]	hit with GO BP
GN011901	Chromosome_5A	7392	11	67	33.428030303030305	0.32846186700339824	75.71829768848563	67	0.835820895522388	89.68253968253968	23	0.9565217391304348	71.18741058655222	44	0.7727272727272727	76.72716627634661	52	0.7884615384615384	methylated (>=50%)	Q5VWJ9	Sorting nexin-30	endocytic recycling [GO:0032456]; mitophagy [GO:0000423]; piecemeal microautophagy of the nucleus [GO:0034727]; positive regulation of autophagosome assembly [GO:2000786]; protein transport [GO:0015031]; reticulophagy [GO:0061709]	hit with GO BP
GN011902	Chromosome_5A	53175	21	914	35.10296191819464	0.55816664726560306	34.33813333333333	908	0.32819383259911894	68.85327991987982	39	0.7435897435897436	32.802263915504255	869	0.3095512082853855	40.77181208053691	18	0.4444444444444444	sparse (10-50%)	Q6ZNA5	Ferric reductase 1 (EC 1.-.-.-) (Ferric-chelate reductase 1) (Stromal cell-derived receptor 2) (SDR-2)	intracellular iron ion homeostasis [GO:0006879]	hit with GO BP
GN011903	Chromosome_5A	9182	13	126	35.51513831409279	0.4351806086868208	76.75083373034778	126	0.8809523809523809	61.37339055793991	16	0.8125	78.67095391211147	110	0.8909090909090909	48.5912617394855	32	0.46875	methylated (>=50%)	Q9Y366	Intraflagellar transport protein 52 homolog (Protein NGD5 homolog)	cilium assembly [GO:0060271]; intraciliary anterograde transport [GO:0035720]; intraciliary transport [GO:0042073]	hit with GO BP
GN011904	Chromosome_5A	8873	7	246	37.55212442240505	0.7871027764405524	0.6816143497757847	243	0	0.32085561497326204	29	0	0.714635340186001	214	0	1.3764404609475032	83	0	unmethylated (<10%)	Q71R50	Dehydrogenase/reductase SDR family member 11 (17-beta-hydroxysteroid dehydrogenase) (3-beta-hydroxysteroid 3-dehydrogenase) (EC 1.1.1.270) (Estradiol 17-beta-dehydrogenase) (EC 1.1.1.62) (Short-chain dehydrogenase/reductase family 24C member 1)	estrogen biosynthetic process [GO:0006703]	hit with GO BP
GN011905	Chromosome_5A	10377	7	152	37.18801194950371	0.42395858532101216	84.13223140495867	152	0.875	83.98133748055987	53	0.8679245283018868	84.17673138663812	99	0.8787878787878788	64.07689227072487	35	0.6857142857142857	methylated (>=50%)	Q9UPG8	Zinc finger protein PLAGL2 (Pleiomorphic adenoma-like protein 2)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011906	Chromosome_5A	4682	3	93	35.924818453652286	0.6157590396203282	70.03003823047516	92	0.8152173913043478	39.425587467362924	7	0.42857142857142855	71.71877251116554	85	0.8470588235294118	52.67127592708988	28	0.39285714285714285	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011907	Chromosome_5A	501	1	4	44.91017964071856	0.1691995947315096	47.16981132075472	4	0.5	47.16981132075472	4	0.5	NA	NA	NA	80.99787685774947	21	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN011908	Chromosome_5A	5439	8	123	38.3710240853098	0.6152647029610091	55.521378037526915	87	0.7011494252873564	52.215657311669126	25	0.64	57.88086452293094	62	0.7258064516129032	46.17706237424547	17	0.4117647058823529	methylated (>=50%)	Q969P5	F-box only protein 32 (Atrogin-1) (Muscle atrophy F-box protein) (MAFbx)	negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process [GO:0062026]; protein ubiquitination [GO:0016567]; response to denervation involved in regulation of muscle adaptation [GO:0014894]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN011909	Chromosome_5A	321	1	6	46.41744548286604	0.35056425191117585	NA	0	NA	NA	NA	NA	NA	NA	NA	39.96447602131439	16	0.1875	NA	NA	NA	NA	no Swiss-Prot hit
GN011910	Chromosome_5A	228	1	6	46.92982456140351	0.6047745358090185	0	4	0	0	4	0	NA	NA	NA	0.7818317200297841	61	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011911	Chromosome_5A	741	1	27	44.12955465587044	0.7535593220338983	0.4748338081671415	25	0	0.4748338081671415	25	0	NA	NA	NA	0.4282655246252677	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011912	Chromosome_5A	2738	4	91	35.829072315558804	1.0356985492787962	0.6057629338572365	91	0	0.802407221664995	19	0	0.5674036392095481	72	0	0.5893909626719057	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011913	Chromosome_5A	1744	3	40	33.60091743119266	0.8144489977000222	0.5730659025787965	38	0	0.31612223393045313	19	0	0.8793969849246231	19	0	0.6606397774687065	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011914	Chromosome_5A	1049	2	37	43.755958055290755	0.7371889838556506	NA	0	NA	NA	NA	NA	NA	NA	NA	1.272264631043257	36	0.027777777777777776	NA	NA	NA	NA	no Swiss-Prot hit
GN011915	Chromosome_5A	21471	9	359	35.23822830795026	0.5406960251584891	91.18200344881643	358	0.9972067039106145	93.58108108108108	25	1	91.03428191046763	333	0.996996996996997	92.42032730404823	76	0.9868421052631579	methylated (>=50%)	Q5FWF5	N-acetyltransferase ESCO1 (EC 2.3.1.-) (CTF7 homolog 1) (Establishment factor-like protein 1) (EFO1) (EFO1p) (hEFO1) (Establishment of cohesion 1 homolog 1) (ECO1 homolog 1) (ESO1 homolog 1)	peptidyl-lysine acetylation [GO:0018394]; post-translational protein acetylation [GO:0034421]; regulation of DNA replication [GO:0006275]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN011916	Chromosome_5A	1224	1	58	46.97712418300654	0.8637126797576465	2.231356429829712	58	0	2.231356429829712	58	0	NA	NA	NA	0.39147455415397997	71	0	unmethylated (<10%)	Q8N0N9	Opine dehydrogenase (EC 1.5.1.-)	NA	hit, no GO BP
GN011917	Chromosome_5A	1218	1	40	43.8423645320197	0.6889822239192228	1.4018691588785046	40	0	1.4018691588785046	40	0	NA	NA	NA	0.34965034965034963	62	0	unmethylated (<10%)	Q8N0N9	Opine dehydrogenase (EC 1.5.1.-)	NA	hit, no GO BP
GN011918	Chromosome_5A	603	1	22	40.46434494195688	0.915907207953604	74.74185861795075	22	1	74.74185861795075	22	1	NA	NA	NA	50.14198782961461	50	0.7	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011919	Chromosome_5A	756	2	25	49.20634920634921	0.8241758241758241	1.859504132231405	18	0	2.4489795918367347	13	0	1.2552301255230125	5	0	1.910299003322259	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011920	Chromosome_5A	1522	2	50	36.990801576872535	0.9629011033505416	0.9603340292275574	50	0	0.6511627906976745	28	0	1.2121212121212122	22	0	0.3938730853391685	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011921	Chromosome_5A	1495	3	16	32.77591973244147	0.40117400419287214	65.33066132264528	16	0.75	40.894568690095845	4	0.5	71.79054054054055	12	0.8333333333333334	39.37587657784011	44	0.38636363636363635	methylated (>=50%)	B6LS00	UPF0728 protein	NA	hit, no GO BP
GN011922	Chromosome_5A	15493	8	133	32.931001097269736	0.31673033340342516	81.13538017720997	133	0.8646616541353384	52.09988649262202	16	0.5	84.03399433427762	117	0.9145299145299145	41.42688214426488	29	0.4482758620689655	methylated (>=50%)	B3NYF7	NFU1 iron-sulfur cluster scaffold homolog, mitochondrial	iron-sulfur cluster assembly [GO:0016226]	hit with GO BP
GN011925	Chromosome_5A	8446	6	63	33.199147525455835	0.27930363321799306	81.630615640599	58	0.9310344827586207	91.66666666666667	18	1	78.18506928922665	40	0.9	54.18359057676685	36	0.5833333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011924	Chromosome_5A	2640	1	134	43.10606060606061	1.1025884773021242	4.725738396624473	78	0	4.725738396624473	78	0	NA	NA	NA	6.413232733604179	73	0	unmethylated (<10%)	Q5SVZ6	Zinc finger MYM-type protein 1	NA	hit, no GO BP
GN011923	Chromosome_5A	237	1	6	48.9451476793249	0.4624390243902439	1.5384615384615385	4	0	1.5384615384615385	4	0	NA	NA	NA	3.35978835978836	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011945	Chromosome_5A	365	2	3	38.35616438356164	0.228125	0.9523809523809523	3	0	0.9523809523809523	3	0	NA	NA	NA	0.42625745950554134	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011944	Chromosome_5A	3089	2	81	35.998705082550984	0.811021325009481	2.0667384284176533	81	0	2.899197145405888	43	0	1.290054099042863	38	0	0.9555661729574773	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011943	Chromosome_5A	9745	8	121	34.109799897383276	0.42688926862116156	84.53134698944754	121	0.9338842975206612	84.11016949152543	9	0.8888888888888888	84.55756296980087	112	0.9375	0.3835091083413231	52	0	methylated (>=50%)	Q61425	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial (HCDH) (EC 1.1.1.35) (Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase) (Short-chain 3-hydroxyacyl-CoA dehydrogenase)	fatty acid beta-oxidation [GO:0006635]; negative regulation of insulin secretion [GO:0046676]; positive regulation of cold-induced thermogenesis [GO:0120162]; regulation of insulin secretion [GO:0050796]; response to activity [GO:0014823]; response to insulin [GO:0032868]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN011942	Chromosome_5A	1773	4	52	46.64410603496898	0.5392525004386735	0.9090909090909091	6	0	1.8518518518518519	4	0	0	2	0	2.962962962962963	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011941	Chromosome_5A	1934	2	38	35.16028955532575	0.6357494441993443	0.6578947368421053	27	0	0.5454545454545454	20	0	0.8632138114209827	7	0	0.5144995322731525	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011938	Chromosome_5A	408	1	10	52.450980392156865	0.3609022556390977	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5571030640668524	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011937	Chromosome_5A	1410	1	46	48.723404255319146	0.5516619603306909	0.7168458781362007	41	0	0.7168458781362007	41	0	NA	NA	NA	0.38204393505253104	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011936	Chromosome_5A	744	1	30	46.90860215053763	0.7422680412371134	18.166089965397923	29	0	18.166089965397923	29	0	NA	NA	NA	46.53010033444816	46	0.30434782608695654	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011935	Chromosome_5A	19735	12	263	36.40739802381555	0.40368118495787186	79.57939175983113	220	0.8454545454545455	92.96435272045028	22	1	78.36247334754798	198	0.8282828282828283	91.87214611872146	21	0.9523809523809523	methylated (>=50%)	Q8NCG7	Diacylglycerol lipase-beta (DAGL-beta) (DGL-beta) (EC 3.1.1.116) (KCCR13L) (PUFA-specific triacylglycerol lipase) (EC 3.1.1.3) (Sn1-specific diacylglycerol lipase beta)	arachidonate metabolic process [GO:0019369]; diacylglycerol catabolic process [GO:0046340]; neurogenesis [GO:0022008]; positive regulation of triglyceride catabolic process [GO:0010898]; prostaglandin biosynthetic process [GO:0001516]; regulation of inflammatory response [GO:0050727]	hit with GO BP
GN011934	Chromosome_5A	21029	13	285	34.30025203290694	0.463384644360859	85.74903093410352	240	0.9375	88.78504672897196	28	0.9285714285714286	85.39010708822029	212	0.9386792452830188	15.455241009946443	43	0	methylated (>=50%)	Q61103	Zinc finger protein ubi-d4 (Apoptosis response zinc finger protein) (BRG1-associated factor 45D) (BAF45D) (D4, zinc and double PHD fingers family 2) (Protein requiem)	chromatin remodeling [GO:0006338]; negative regulation of myeloid progenitor cell differentiation [GO:1905454]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of stem cell population maintenance [GO:1902459]; regulation of DNA-templated transcription [GO:0006355]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN011933	Chromosome_5A	4453	4	56	34.763081068942284	0.41754307826002507	83.06188925081433	55	0.8181818181818182	36.979166666666664	5	0.2	85.83987441130299	50	0.88	71.26068376068376	56	0.6964285714285714	methylated (>=50%)	Q9CPY6	Glucose-induced degradation protein 4 homolog (Vacuolar import and degradation protein 24 homolog)	NA	hit, no GO BP
GN011932	Chromosome_5A	7600	7	88	36.03947368421053	0.358087870737132	89.01373283395755	61	0.9508196721311475	81.3953488372093	2	1	89.22386144964722	59	0.9491525423728814	83.46153846153847	7	1	methylated (>=50%)	Q1LZ96	ATP synthase mitochondrial F1 complex assembly factor 2	mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]	hit with GO BP
GN011931	Chromosome_5A	4433	10	38	33.273178434468754	0.31084317785085047	NA	0	NA	NA	NA	NA	NA	NA	NA	0	7	0	NA	Q4R6X9	Dynein regulatory complex subunit 3 (Leucine-rich repeat-containing protein 48)	NA	hit, no GO BP
GN011930	Chromosome_5A	554	2	17	40.974729241877256	0.7879852744310576	0.15673981191222572	17	0	0.17985611510791366	15	0	0	2	0	0.9870918754745635	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011929	Chromosome_5A	3093	9	88	42.06272227610734	0.6434701201435481	0.6092607636068237	87	0	0.5402160864345739	67	0	0.7537688442211056	20	0	0.9265858873841768	25	0	unmethylated (<10%)	Q13231	Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]; immune response [GO:0006955]; polysaccharide digestion [GO:0044245]; response to bacterium [GO:0009617]	hit with GO BP
GN011928	Chromosome_5A	717	1	23	45.60669456066945	0.6205222757375075	0	18	0	0	18	0	NA	NA	NA	0.532319391634981	63	0	unmethylated (<10%)	Q16222	UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX) (Protein-pyrophosphorylation enzyme) (EC 2.7.4.-) (Sperm-associated antigen 2) (UDP-N-acetylgalactosamine pyrophosphorylase) (EC 2.7.7.83) (UDP-N-acetylglucosamine pyrophosphorylase) (EC 2.7.7.23)	antiviral innate immune response [GO:0140374]; positive regulation of type I interferon production [GO:0032481]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	hit with GO BP
GN011927	Chromosome_5A	567	1	16	45.67901234567901	0.5427785090343424	0.7604562737642585	16	0	0.7604562737642585	16	0	NA	NA	NA	25.816023738872403	29	0.10344827586206896	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003222	Chromosome_5A	918	1	3	40.631808278867105	0.10652947547578524	51.298701298701296	3	0.6666666666666666	51.298701298701296	3	0.6666666666666666	NA	NA	NA	47.48201438848921	7	0.5714285714285714	NA	NA	NA	NA	no Swiss-Prot hit
GN011960	Chromosome_5A	6691	6	69	33.55253325362427	0.36773985423553307	70.64777327935222	69	0.8115942028985508	76.24309392265194	13	0.8461538461538461	69.39281288723667	56	0.8035714285714286	72.27615965480044	25	0.8	methylated (>=50%)	Q9NPB1	5'(3')-deoxyribonucleotidase, mitochondrial (5',3'-nucleotidase, mitochondrial) (EC 3.1.3.-) (Deoxy-5'-nucleotidase 2) (dNT-2)	deoxyribonucleotide catabolic process [GO:0009264]; dGMP catabolic process [GO:0046055]; DNA replication [GO:0006260]; dTMP catabolic process [GO:0046074]; dUMP catabolic process [GO:0046079]; GMP catabolic process [GO:0046038]; pyrimidine deoxyribonucleotide catabolic process [GO:0009223]; TMP catabolic process [GO:0046045]; UMP catabolic process [GO:0046050]	hit with GO BP
GN011959	Chromosome_5A	57591	60	542	35.260717820492786	0.3039153205273627	72.76067848428727	530	0.8433962264150944	83.6056257991192	143	0.965034965034965	69.93105493364963	387	0.7984496124031008	36.28158844765343	11	0.18181818181818182	methylated (>=50%)	Q9UKN7	Unconventional myosin-XV (Unconventional myosin-15)	endocytosis [GO:0006897]; response to light stimulus [GO:0009416]; sensory perception of sound [GO:0007605]	hit with GO BP
GN011958	Chromosome_5A	8728	9	79	35.28872593950504	0.291108366845044	84.14784394250513	79	0.9873417721518988	84.75336322869956	19	1	83.96804260985353	60	0.9833333333333333	86.37640449438203	35	1	methylated (>=50%)	A8E534	Lysine-specific demethylase 8 (EC 1.14.11.27) (JmjC domain-containing protein 5) (Jumonji domain-containing protein 5)	circadian regulation of gene expression [GO:0032922]; G2/M transition of mitotic cell cycle [GO:0000086]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; protein destabilization [GO:0031648]	hit with GO BP
GN011957	Chromosome_5A	750	1	28	41.6	0.872093023255814	0.6075334143377886	28	0	0.6075334143377886	28	0	NA	NA	NA	0.8356545961002786	58	0	unmethylated (<10%)	Q3UP23	Transmembrane protein 26	NA	hit, no GO BP
GN011956	Chromosome_5A	35630	27	632	36.55627280381701	0.5311533947744671	62.96544783629655	496	0.5826612903225806	81.47673922321809	49	0.7959183673469388	61.3863909418575	447	0.5592841163310962	0.5398110661268556	40	0	methylated (>=50%)	O08810	116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain-containing protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN011955	Chromosome_5A	3222	1	110	41.21663563004345	0.8075721567385404	1.2880143112701252	110	0	1.2880143112701252	110	0	NA	NA	NA	3.3500837520938025	42	0	unmethylated (<10%)	P27046	Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)	in utero embryonic development [GO:0001701]; liver development [GO:0001889]; lung alveolus development [GO:0048286]; mannose metabolic process [GO:0006013]; mitochondrion organization [GO:0007005]; N-glycan processing [GO:0006491]; positive regulation of neurogenesis [GO:0050769]; respiratory gaseous exchange by respiratory system [GO:0007585]; retina morphogenesis in camera-type eye [GO:0060042]; vacuole organization [GO:0007033]	hit with GO BP
GN019861	Chromosome_5A	1678	1	40	41.775923718712754	0.5465441990749789	58.70818915801615	37	0.8108108108108109	58.70818915801615	37	0.8108108108108109	NA	NA	NA	72.66903914590748	17	0.9411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011954	Chromosome_5A	288	1	22	50.34722222222222	1.2054794520547945	0.38461538461538464	19	0	0.38461538461538464	19	0	NA	NA	NA	1.084010840108401	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011953	Chromosome_5A	4562	9	31	30.797895659798336	0.28915687284801794	76.87476911710381	31	0.9354838709677419	77.07129094412332	7	1	76.82815356489945	24	0.9166666666666666	62.59225092250922	45	0.6	methylated (>=50%)	P36874	Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A (PP-1G-A) (xPP1-gamma1) (EC 3.1.3.16)	mitotic nuclear membrane reassembly [GO:0007084]; protein dephosphorylation [GO:0006470]; regulation of circadian rhythm [GO:0042752]	hit with GO BP
GN011952	Chromosome_5A	10662	4	186	36.60664040517727	0.5207446336412779	87.6391772032459	165	0.9515151515151515	90.28642590286425	15	1	87.42215416028586	150	0.9466666666666667	16.163996229971726	35	0.14285714285714285	methylated (>=50%)	P24528	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)	cellular response to ionizing radiation [GO:0071479]; cellular response to oxidative stress [GO:0034599]; DNA alkylation repair [GO:0006307]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; mammary gland epithelial cell differentiation [GO:0060644]; negative regulation of apoptotic process [GO:0043066]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair [GO:2000781]; response to ethanol [GO:0045471]; response to folic acid [GO:0051593]; response to toxic substance [GO:0009636]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN011951	Chromosome_5A	21811	11	238	33.39599284764569	0.3927638189433926	83.82758620689656	236	0.9110169491525424	74.19793365959761	67	0.8059701492537313	86.40868678035272	169	0.9526627218934911	50.546206082078534	42	0.5476190476190477	methylated (>=50%)	Q70CQ4	Ubiquitin carboxyl-terminal hydrolase 31 (EC 3.4.19.12) (Deubiquitinating enzyme 31) (Ubiquitin thioesterase 31) (Ubiquitin-specific-processing protease 31)	protein deubiquitination [GO:0016579]	hit with GO BP
GN011950	Chromosome_5A	7782	6	80	33.500385505011565	0.36757178029296633	74.56896551724138	31	0.7419354838709677	92.85714285714286	1	1	73.80239520958084	30	0.7333333333333333	60.256410256410255	3	0.6666666666666666	methylated (>=50%)	Q7ZVJ8	Methyltransferase-like 26	NA	hit, no GO BP
GN016057	Chromosome_5A	1619	4	10	31.192093885114268	0.25446372438073683	NA	0	NA	NA	NA	NA	NA	NA	NA	13.630168105406634	49	0.08163265306122448	NA	NA	NA	NA	no Swiss-Prot hit
GN011963	Chromosome_5A	4443	6	55	34.796308800360116	0.41483537470398	74.05217391304348	54	0.6481481481481481	60.736196319018404	10	0.5	76.78122380553228	44	0.6818181818181818	1.896813353566009	26	0	methylated (>=50%)	Q0II70	MAPK regulated corepressor interacting protein 2 (Protein FAM195A)	NA	hit, no GO BP
GN011964	Chromosome_5A	9568	11	265	38.53469899665552	0.7468240713740807	8.32445233866193	261	0.06130268199233716	18.391502276176023	138	0.10144927536231885	1.883495145631068	123	0.016260162601626018	0.3771805752003772	45	0	unmethylated (<10%)	Q96JH8	Ras-associating and dilute domain-containing protein	neural crest cell migration [GO:0001755]; signal transduction [GO:0007165]; substrate adhesion-dependent cell spreading [GO:0034446]	hit with GO BP
GN011965	Chromosome_5A	2433	4	15	35.22400328812166	0.19964442013129102	91.37001078748652	15	1	92.6654740608229	8	1	89.40217391304348	7	1	81.04118104118105	17	0.7647058823529411	methylated (>=50%)	Q5BJT4	Thioredoxin domain-containing protein 15	cilium assembly [GO:0060271]; positive regulation of smoothened signaling pathway [GO:0045880]	hit with GO BP
GN011966	Chromosome_5A	1056	1	0	42.42424242424242	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011985	Chromosome_5A	3467	2	7	44.620709547158924	0.040729912797137544	0	3	0	0	3	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011986	Chromosome_5A	615	1	3	45.52845528455285	0.0950834879406308	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011987	Chromosome_5A	342	1	1	45.90643274853801	0.055501460564751706	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011988	Chromosome_5A	513	1	2	45.6140350877193	0.07550224446243285	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011971	Chromosome_5A	1367	1	1	44.330651060716896	0.014936625874125874	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011967	Chromosome_5A	615	1	3	45.36585365853659	0.09557604641525072	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011989	Chromosome_5A	342	1	1	45.90643274853801	0.055501460564751706	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011992	Chromosome_5A	343	1	0	43.731778425655975	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011990	Chromosome_5A	1389	1	2	44.49244060475162	0.02913873941911325	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011968	Chromosome_5A	427	1	0	44.02810304449649	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011991	Chromosome_5A	540	1	2	45.55555555555556	0.07168934616661135	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011973	Chromosome_5A	321	1	0	43.30218068535826	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011993	Chromosome_5A	741	1	1	42.64507422402159	0.02980212355212355	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011975	Chromosome_5A	513	1	2	45.6140350877193	0.07550224446243285	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011974	Chromosome_5A	763	1	1	42.988204456094365	0.028474399164054337	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011994	Chromosome_5A	1134	1	1	44.973544973544975	0.01757022667761578	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011969	Chromosome_5A	491	1	2	45.621181262729124	0.07868589743589743	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011976	Chromosome_5A	342	1	1	45.90643274853801	0.055501460564751706	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011977	Chromosome_5A	639	1	1	45.38341158059468	0.030393835616438356	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011978	Chromosome_5A	540	1	2	45.55555555555556	0.07168934616661135	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011970	Chromosome_5A	427	1	0	44.02810304449649	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011979	Chromosome_5A	321	1	0	43.30218068535826	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011980	Chromosome_5A	741	1	1	42.64507422402159	0.02980212355212355	NA	0	NA	NA	NA	NA	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011981	Chromosome_5A	1134	1	1	44.44444444444444	0.018049277392245495	0	1	0	0	1	0	NA	NA	NA	0	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011982	Chromosome_5A	3035	2	8	44.11861614497529	0.054585349184367186	0.9433962264150944	8	0	1.910828025477707	5	0	0	3	0	0.6114769520225776	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011995	Chromosome_5A	801	1	18	41.19850187265918	0.5296645971859961	24.200913242009133	18	0.1111111111111111	24.200913242009133	18	0.1111111111111111	NA	NA	NA	0.819672131147541	35	0	sparse (10-50%)	Q9VV87	Very long chain fatty acid elongase 6 (ELOVL6) (EC 2.3.1.199) (Elongation of very long chain fatty acids protein 6) (Neighbor of abl) (Very-long-chain 3-oxoacyl-CoA synthase)	fatty acid elongation [GO:0030497]; fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty acid biosynthetic process [GO:0042759]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN011996	Chromosome_5A	864	1	18	38.31018518518518	0.5891355405712554	0.7368421052631579	18	0	0.7368421052631579	18	0	NA	NA	NA	0.7911392405063291	35	0	unmethylated (<10%)	Q61241	Testis-specific serine/threonine-protein kinase 1 (TSK-1) (TSK1) (TSSK-1) (Testis-specific kinase 1) (EC 2.7.11.1) (Serine/threonine-protein kinase 22A)	gene expression [GO:0010467]; skin development [GO:0043588]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]	hit with GO BP
GN011997	Chromosome_5A	12938	12	126	34.07791003246251	0.3375815382831299	85.19378045950336	126	0.9047619047619048	72.67441860465117	12	0.75	86.58159319412219	114	0.9210526315789473	0.8615384615384616	36	0	methylated (>=50%)	Q8R3P7	Intraflagellar transport protein 38 (Clusterin-associated protein 1) (Qilin)	axoneme assembly [GO:0035082]; cilium assembly [GO:0060271]; floor plate formation [GO:0021508]; heart looping [GO:0001947]; intraciliary anterograde transport [GO:0035720]; intraciliary transport [GO:0042073]; left/right pattern formation [GO:0060972]; neural tube closure [GO:0001843]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN011998	Chromosome_5A	19767	7	395	35.69585673091516	0.6274010270041587	90.50465127488312	359	0.9526462395543176	94.35261707988981	21	1	90.36511662754108	338	0.9497041420118343	96.81945743685688	24	1	methylated (>=50%)	P07511	Serine hydroxymethyltransferase, cytosolic (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (L-allo-threonine/L-threonine aldolase SHMT1) (Serine methylase)	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; cellular response to tetrahydrofolate [GO:1904482]; DNA replication [GO:0006260]; dTMP biosynthetic process [GO:0006231]; folic acid metabolic process [GO:0046655]; glycine metabolic process [GO:0006544]; L-serine catabolic process [GO:0006565]; L-serine metabolic process [GO:0006563]; protein homotetramerization [GO:0051289]; purine nucleobase biosynthetic process [GO:0009113]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	hit with GO BP
GN011999	Chromosome_5A	886	2	19	41.08352144469526	0.5087645067698259	86.34361233480176	8	1	86.34361233480176	8	1	NA	NA	NA	93.88816644993499	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012008	Chromosome_5A	29140	35	379	36.9114619080302	0.3823425715437859	85.75617702959543	333	0.9069069069069069	83.01033591731266	125	0.904	86.68215815844891	208	0.9086538461538461	0.9036144578313253	54	0	methylated (>=50%)	Q8IWZ3	Ankyrin repeat and KH domain-containing protein 1 (HIV-1 Vpr-binding ankyrin repeat protein) (Multiple ankyrin repeats single KH domain) (hMASK)	innate immune response [GO:0045087]	hit with GO BP
GN012009	Chromosome_5A	3773	3	56	36.019082957858465	0.4576304959930691	70.08183306055646	54	0.7592592592592593	42.04451772464963	19	0.42105263157894735	88.54505971769815	35	0.9428571428571428	43.81858083394294	36	0.5	methylated (>=50%)	Q13158	FAS-associated death domain protein (FAS-associating death domain-containing protein) (Growth-inhibiting gene 3 protein) (Mediator of receptor induced toxicity)	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; behavioral response to cocaine [GO:0048148]; cellular response to mechanical stimulus [GO:0071260]; death-inducing signaling complex assembly [GO:0071550]; defense response to virus [GO:0051607]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; kidney development [GO:0001822]; lymph node development [GO:0048535]; necroptotic signaling pathway [GO:0097527]; negative regulation of activation-induced cell death of T cells [GO:0070236]; positive regulation of activated T cell proliferation [GO:0042104]; positive regulation of adaptive immune response [GO:0002821]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation [GO:2000454]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of innate immune response [GO:0045089]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of macrophage differentiation [GO:0045651]; positive regulation of proteolysis [GO:0045862]; positive regulation of T cell mediated cytotoxicity [GO:0001916]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; positive regulation of type II interferon production [GO:0032729]; regulation of necroptotic process [GO:0060544]; spleen development [GO:0048536]; T cell differentiation in thymus [GO:0033077]; T cell homeostasis [GO:0043029]; thymus development [GO:0048538]; TRAIL-activated apoptotic signaling pathway [GO:0036462]	hit with GO BP
GN012010	Chromosome_5A	10757	15	263	36.63660871990332	0.728613849656437	46.24746450304259	249	0.4538152610441767	47.20908230842006	60	0.31666666666666665	46.04837919890314	189	0.4973544973544973	1.8583626318432949	44	0	sparse (10-50%)	Q1EHB4	Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12)	monocarboxylic acid transport [GO:0015718]; sodium ion transport [GO:0006814]	hit with GO BP
GN012011	Chromosome_5A	544	1	11	41.36029411764706	0.4890487087283426	0.5660377358490566	11	0	0.5660377358490566	11	0	NA	NA	NA	1.3617793917385383	54	0	unmethylated (<10%)	Q7KQL3	ADP-ribosylation factor 1 (PfARF1) (EC 3.6.5.2)	intracellular protein transport [GO:0006886]	hit with GO BP
GN012012	Chromosome_5A	684	1	16	41.228070175438596	0.5544915640674875	0.351493848857645	16	0	0.351493848857645	16	0	NA	NA	NA	0.3964757709251101	41	0	unmethylated (<10%)	Q5E9I6	ADP-ribosylation factor 3	intracellular protein transport [GO:0006886]	hit with GO BP
GN012013	Chromosome_5A	639	1	16	42.09702660406886	0.5748987854251012	9.538950715421304	16	0	9.538950715421304	16	0	NA	NA	NA	4.820805581985411	57	0	unmethylated (<10%)	P36397	ADP-ribosylation factor 1 (AtARF1) (EC 3.6.5.2) (Protein BFA-VISUALIZED EXOCYTIC TRAFFICKING DEFECTIVE 1)	intracellular protein transport [GO:0006886]; regulation of auxin metabolic process [GO:0090354]; response to brefeldin A [GO:0031001]; vesicle-mediated transport to the plasma membrane [GO:0098876]	hit with GO BP
GN012014	Chromosome_5A	7204	13	90	35.771793448084395	0.39326101671887015	87.46075353218211	90	0.9111111111111111	87.91492104415082	61	0.8852459016393442	86.75363773206222	29	0.9655172413793104	0.5580746424834322	54	0	methylated (>=50%)	Q4GZT3	Polycystin-2 (Polycystic kidney disease 2 protein homolog) (Transient receptor potential cation channel subfamily P member 2)	calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cellular response to calcium ion [GO:0071277]; cellular response to fluid shear stress [GO:0071498]; chordate embryonic development [GO:0043009]; detection of mechanical stimulus [GO:0050982]; determination of left/right symmetry [GO:0007368]; embryonic organ development [GO:0048568]; heart development [GO:0007507]; kidney development [GO:0001822]; liver development [GO:0001889]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein heterotetramerization [GO:0051290]; protein tetramerization [GO:0051262]; release of sequestered calcium ion into cytosol [GO:0051209]; renal tubule morphogenesis [GO:0061333]; sodium ion transport [GO:0006814]; transmembrane transport [GO:0055085]	hit with GO BP
GN012015	Chromosome_5A	585	1	21	44.1025641025641	0.7603515504115863	0.625	21	0	0.625	21	0	NA	NA	NA	0.525279054497702	67	0	unmethylated (<10%)	P00761	Trypsin (EC 3.4.21.4)	proteolysis [GO:0006508]	hit with GO BP
GN012016	Chromosome_5A	609	1	0	43.67816091954023	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6719252118025124	61	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012017	Chromosome_5A	67904	68	660	35.460355796418476	0.3129699352870434	88.8562369499652	619	0.9612277867528272	92.1503024063827	157	0.9936305732484076	88.03107472116562	462	0.9502164502164502	7.225288509784245	30	0.06666666666666667	methylated (>=50%)	Q8IZQ1	WD repeat and FYVE domain-containing protein 3 (Autophagy-linked FYVE protein) (Alfy)	aggrephagy [GO:0035973]	hit with GO BP
GN012018	Chromosome_5A	3899	3	134	38.317517312131315	0.9364112950201184	0.6055363321799307	134	0	0.694225307668034	86	0	0.497893527384144	48	0	0.618647812638091	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012019	Chromosome_5A	4884	4	108	34.3980343980344	0.7502090741004125	2.8869678682107325	108	0	1.8806509945750451	56	0	3.7136066547831255	52	0	1.437258153676064	55	0	unmethylated (<10%)	Q5ZJA3	Cerebellar degeneration-related protein 2	NA	hit, no GO BP
GN012020	Chromosome_5A	315	1	3	42.857142857142854	0.21	94.83568075117371	3	1	94.83568075117371	3	1	NA	NA	NA	82.96500920810313	14	0.9285714285714286	NA	NA	NA	NA	no Swiss-Prot hit
GN012021	Chromosome_5A	1624	2	61	46.24384236453202	0.7275023867224792	0.7451564828614009	59	0	0.8237232289950577	55	0	0	4	0	0.623608017817372	69	0	unmethylated (<10%)	Q24423	Zinc finger protein Noc (Zinc finger protein NocA)	brain development [GO:0007420]; compound eye photoreceptor fate commitment [GO:0001752]; eye-antennal disc development [GO:0035214]; leg disc development [GO:0035218]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; ocellus development [GO:0008056]; open tracheal system development [GO:0007424]; terminal branching, open tracheal system [GO:0007430]; wing disc development [GO:0035220]	hit with GO BP
GN012022	Chromosome_5A	1934	2	73	44.20889348500517	0.7953915492957746	1.1206896551724137	73	0	1.46163215590743	61	0	0.2949852507374631	12	0	0.390625	47	0	unmethylated (<10%)	Q24423	Zinc finger protein Noc (Zinc finger protein NocA)	brain development [GO:0007420]; compound eye photoreceptor fate commitment [GO:0001752]; eye-antennal disc development [GO:0035214]; leg disc development [GO:0035218]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; ocellus development [GO:0008056]; open tracheal system development [GO:0007424]; terminal branching, open tracheal system [GO:0007430]; wing disc development [GO:0035220]	hit with GO BP
GN012023	Chromosome_5A	273	1	10	45.05494505494506	0.8120166567519334	0.7662835249042146	10	0	0.7662835249042146	10	0	NA	NA	NA	0.45440775522568916	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012024	Chromosome_5A	300	1	14	40.333333333333336	1.2280701754385965	NA	0	NA	NA	NA	NA	NA	NA	NA	82.38835925740091	26	0.7692307692307693	NA	NA	NA	NA	no Swiss-Prot hit
GN012025	Chromosome_5A	3943	5	46	40.0456505199087	0.2910644880719694	92.80397022332507	45	0.9555555555555556	92.70664505672609	42	0.9523809523809523	93.90243902439025	3	1	70.76461769115443	18	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012026	Chromosome_5A	3454	3	51	33.09206716850029	0.5404989107422294	91.75080029549372	51	0.9607843137254902	92.643678160919535	9	1	91.64368450082736	42	0.9523809523809523	89.33333333333333	13	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012027	Chromosome_5A	387	1	8	47.803617571059434	0.36185133239831696	89.92443324937028	8	1	89.92443324937028	8	1	NA	NA	NA	86.035451794206665	33	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012028	Chromosome_5A	16869	16	206	34.993182761278085	0.39911512799886434	84.91603507207608	195	0.9333333333333333	72.78911564625851	21	0.8571428571428571	86.0771861260381	174	0.9425287356321839	18.7027027027027	30	0.3333333333333333	methylated (>=50%)	Q8BS45	Intraflagellar transport protein 56 (Protein hop-sterile) (Tetratricopeptide repeat protein 26) (TPR repeat protein 26)	axoneme assembly [GO:0035082]; cilium assembly [GO:0060271]; intraciliary anterograde transport [GO:0035720]; intraciliary transport [GO:0042073]; intraciliary transport involved in cilium assembly [GO:0035735]; manchette assembly [GO:1905198]; photoreceptor cell differentiation [GO:0046530]; photoreceptor cell morphogenesis [GO:0008594]; protein localization to cilium [GO:0061512]; smoothened signaling pathway [GO:0007224]; spermatid development [GO:0007286]	hit with GO BP
GN012032	Chromosome_5A	3215	4	80	38.911353032659406	0.6580866361333572	0.6941907197661673	79	0	1.7587939698492463	23	0	0.5130397605814451	56	0	0.6090808416389811	73	0	unmethylated (<10%)	A1ZA47	PDZ and LIM domain protein Zasp (Z band alternatively spliced PDZ-motif protein)	actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]; myofibril assembly [GO:0030239]; regulation of cell-matrix adhesion [GO:0001952]	hit with GO BP
GN012031	Chromosome_5A	7498	9	69	35.60949586556415	0.29138930363880394	85.76854334226988	69	0.9710144927536232	87.56058158319871	10	1	85.48094373865699	59	0.9661016949152542	85.47717842323651	24	1	methylated (>=50%)	Q6P1E7	DNA-directed primase/polymerase protein (EC 2.7.7.102) (EC 2.7.7.7)	DNA replication, synthesis of primer [GO:0006269]; error-prone translesion synthesis [GO:0042276]; mitochondrial DNA repair [GO:0043504]; mitochondrial DNA replication [GO:0006264]; R-loop processing [GO:0062176]; replication fork processing [GO:0031297]; response to UV [GO:0009411]; translesion synthesis [GO:0019985]	hit with GO BP
GN012030	Chromosome_5A	243	1	4	41.56378600823045	0.3841897233201581	81.55339805825243	4	1	81.55339805825243	4	1	NA	NA	NA	70.66420664206642	22	0.9090909090909091	NA	NA	NA	NA	no Swiss-Prot hit
GN012029	Chromosome_5A	183	1	3	43.71584699453552	0.3465909090909091	84.17721518987342	3	1	84.17721518987342	3	1	NA	NA	NA	87.76009791921665	39	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012044	Chromosome_5A	10629	13	94	33.53090601185436	0.31478420152721975	81.76577170153188	94	0.9574468085106383	83.47969264544457	27	0.9629629629629629	81.03083078371381	67	0.9552238805970149	71.53465346534654	15	0.8	methylated (>=50%)	Q6DCF6	EF-hand calcium-binding domain-containing protein 7	positive regulation of protein localization to ciliary membrane [GO:1903569]	hit with GO BP
GN012043	Chromosome_5A	603	1	24	46.93200663349917	0.7228771228771229	80.99290780141844	24	1	80.99290780141844	24	1	NA	NA	NA	86.74971687429219	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012042	Chromosome_5A	4539	6	102	38.79709187045605	0.598202980045171	0.6535947712418301	102	0	0.5102040816326531	36	0	0.73196235622168	66	0	4.691358024691358	58	0	unmethylated (<10%)	Q9UPV7	PHD finger protein 24	NA	hit, no GO BP
GN012041	Chromosome_5A	4719	8	174	40.02966730239458	0.922307065015939	0.6326949384404925	173	0	0.539568345323741	34	0	0.6698564593301436	139	0	0.5284791544333529	36	0	unmethylated (<10%)	Q9UPV7	PHD finger protein 24	NA	hit, no GO BP
GN012040	Chromosome_5A	14809	9	250	35.20831926531164	0.5458512869469704	81.04143947655398	250	0.924	81.8407960199005	8	1	81.02352547664177	242	0.9214876033057852	36.80628272251309	37	0.4594594594594595	methylated (>=50%)	Q8N6D5	Ankyrin repeat domain-containing protein 29	NA	hit, no GO BP
GN012039	Chromosome_5A	7964	8	237	37.908086388749375	0.8291023140582995	9.537856440511307	173	0.08092485549132948	1.0309278350515463	35	0	10.848842487517022	138	0.10144927536231885	6.0278207109737245	25	0	unmethylated (<10%)	Q3E906	Cell division cycle 20.5, cofactor of APC complex (AtCDC20.5)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; positive regulation of anaphase-promoting complex-dependent catabolic process [GO:1905786]; protein ubiquitination [GO:0016567]	hit with GO BP
GN012038	Chromosome_5A	10357	15	52	33.83219078883847	0.1760768015567459	81.86576354679804	52	0.9230769230769231	81.6717791411043	22	0.9545454545454546	81.99588477366255	30	0.9	79.35483870967742	12	0.9166666666666666	methylated (>=50%)	Q8BXQ6	Aminopeptidase O (AP-O) (EC 3.4.11.-)	NA	hit, no GO BP
GN012037	Chromosome_5A	9221	4	134	33.35863789176879	0.523539742766772	75.7699868938401	86	0.8488372093023255	79.56521739130434	4	1	75.6213823629554	82	0.8414634146341463	58.68544600938967	32	0.46875	methylated (>=50%)	Q96MH6	DGAT1/2-independent enzyme synthesizing storage lipids (DIESL) (EC 2.3.1.-) (2-acylglycerol/1,2-diacylglycerol O-acyltransferase) (Monoacylglycerol/Diacylglycerol O-acyltransferase) (MGAT/DGAT) (EC 2.3.1.20, EC 2.3.1.22) (Transmembrane protein 68)	triglyceride biosynthetic process [GO:0019432]	hit with GO BP
GN012036	Chromosome_5A	1218	1	47	43.51395730706076	0.8296521739130435	0.42092603728202044	47	0	0.42092603728202044	47	0	NA	NA	NA	0.395825836631882	51	0	unmethylated (<10%)	Q9BHM6	Octopine dehydrogenase (OcDH) (EC 1.5.1.11)	NA	hit, no GO BP
GN012035	Chromosome_5A	1405	2	46	42.20640569395018	0.7371794871794872	0.6968641114982579	46	0	0.6430868167202572	35	0	0.796812749003984	11	0	0.3776435045317221	50	0	unmethylated (<10%)	Q28GD5	Transcription factor Sox-7	cell differentiation [GO:0030154]; endoderm formation [GO:0001706]; heart development [GO:0007507]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pronephros development [GO:0048793]	hit with GO BP
GN012034	Chromosome_5A	32124	18	560	34.737268086166104	0.5782700501693011	74.86954340190667	538	0.8550185873605948	95.49861495844875	46	1	73.25814129611598	492	0.8414634146341463	56.02189781021898	35	0.7714285714285715	methylated (>=50%)	Q96MU7	YTH domain-containing protein 1 (Splicing factor YT521) (YT521-B)	brown fat cell differentiation [GO:0050873]; dosage compensation by inactivation of X chromosome [GO:0009048]; mRNA export from nucleus [GO:0006406]; mRNA splice site recognition [GO:0006376]; mRNA splicing, via spliceosome [GO:0000398]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of mRNA splicing, via spliceosome [GO:0048024]	hit with GO BP
GN012033	Chromosome_5A	222	1	3	44.14414414414414	0.28498074454428757	81.41025641025641	3	1	81.41025641025641	3	1	NA	NA	NA	84.31221020092735	25	0.92	NA	NA	NA	NA	no Swiss-Prot hit
GN012059	Chromosome_5A	759	1	28	40.18445322793149	0.913828689370485	73.53233830845771	28	1	73.53233830845771	28	1	NA	NA	NA	88.14814814814815	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012058	Chromosome_5A	473	2	5	34.883720930232556	0.36195286195286197	52.824858757062145	5	0.8	55.91836734693877	4	1	45.87155963302752	1	0	73.42908438061042	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012057	Chromosome_5A	3266	3	52	37.14023270055113	0.46186396888852627	94.19306184012066	33	1	94.94702526487367	29	1	84.84848484848484	4	1	86.47302904564316	33	0.9393939393939394	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012056	Chromosome_5A	917	2	40	46.346782988004364	0.827169402850442	92.09486166007905	34	1	92.09486166007905	34	1	NA	NA	NA	91.13992436520799	47	0.9787234042553191	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012055	Chromosome_5A	612	1	23	44.77124183006536	0.7503198294243071	91.57782515991471	23	0.9565217391304348	91.57782515991471	23	0.9565217391304348	NA	NA	NA	84.79472883933097	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012053	Chromosome_5A	1266	1	14	43.996840442338076	0.22863777089783283	69.4267515923567	14	1	69.4267515923567	14	1	NA	NA	NA	58.75	20	0.8	methylated (>=50%)	O60290	Zinc finger protein 862	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN002609	Chromosome_5A	1258	1	44	43.79968203497615	0.7329449152542373	93.89830508474576	15	1	93.89830508474576	15	1	NA	NA	NA	88.59171597633136	58	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012052	Chromosome_5A	1494	5	36	37.08165997322624	0.706717123935667	92.01807228915662	36	1	93.03928325292901	29	1	89.27911275415896	7	1	91.91848208011244	34	0.9705882352941176	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012051	Chromosome_5A	2119	3	27	39.45257196790939	0.3332168504184649	93.44262295081967	5	1	NA	NA	NA	93.44262295081967	5	1	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012050	Chromosome_5A	1077	1	14	37.511606313834726	0.37903469079939667	83.33333333333333	3	1	83.33333333333333	3	1	NA	NA	NA	82.96296296296296	6	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003815	Chromosome_5A	2884	2	31	35.471567267683774	0.3440918152917722	72.88972490007053	30	0.8666666666666667	73.52326189231573	28	0.8928571428571429	67.21311475409836	2	0.5	81.73452314556609	31	0.967741935483871	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012049	Chromosome_5A	2266	6	18	32.259488084730805	0.3058717660292463	89.15547024952015	17	0.9411764705882353	84.7457627118644	10	0.9	92.80701754385964	7	1	84.3404808317089	41	0.926829268292683	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012048	Chromosome_5A	717	1	42	46.72245467224547	1.0988104794570532	90.6764168190128	32	1	90.6764168190128	32	1	NA	NA	NA	95.8142726440988	71	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012047	Chromosome_5A	948	1	26	42.29957805907173	0.6137755864335873	96.71261930010604	26	1	96.71261930010604	26	1	NA	NA	NA	97.63513513513513	9	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012046	Chromosome_5A	1284	1	44	41.978193146417446	0.7778603882693103	91.70653907496013	44	0.9090909090909091	91.70653907496013	44	0.9090909090909091	NA	NA	NA	92.5783749200256	60	0.9833333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012045	Chromosome_5A	423	1	10	52.4822695035461	0.34672131147540985	86.91983122362869	10	1	86.91983122362869	10	1	NA	NA	NA	92.3458540042523	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012062	Chromosome_5A	44796	15	621	34.71961782301991	0.460010679772903	91.73926668755875	472	0.9682203389830508	93.21016166281755	42	0.9761904761904762	91.63220709362918	430	0.9674418604651163	19.13716814159292	17	0.23529411764705882	methylated (>=50%)	Q8K4R9	Disks large-associated protein 5 (DAP-5) (Discs large homolog 7) (Disks large-associated protein DLG7) (Hepatoma up-regulated protein homolog) (HURP)	centrosome localization [GO:0051642]; chromosome segregation [GO:0007059]; kinetochore assembly [GO:0051382]; mitotic spindle organization [GO:0007052]; regulation of mitotic cell cycle [GO:0007346]; signaling [GO:0023052]	hit with GO BP
GN011940	Chromosome_5A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN012063	Chromosome_5A	3244	11	88	38.840937114673245	0.7193194646024834	1.1720831113478956	88	0	0.6775067750677507	54	0	1.8831168831168832	34	0	0.5311301268810859	63	0	unmethylated (<10%)	P27657	Pancreatic triacylglycerol lipase (PL) (Pancreatic lipase) (EC 3.1.1.3)	cholesterol homeostasis [GO:0042632]; fatty acid biosynthetic process [GO:0006633]; high-density lipoprotein particle remodeling [GO:0034375]; intestinal cholesterol absorption [GO:0030299]; lipid metabolic process [GO:0006629]; positive regulation of triglyceride lipase activity [GO:0061365]; post-embryonic development [GO:0009791]; response to lipid [GO:0033993]; response to peptide hormone [GO:0043434]; retinoid metabolic process [GO:0001523]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN012064	Chromosome_5A	13078	28	377	38.40801345771525	0.7900921944037235	0.5812908251932642	377	0	0.514626218851571	196	0	0.6342040202085348	181	0	0.7566706491437675	50	0	unmethylated (<10%)	A2VEC9	SCO-spondin (SCO-spondin pseudogene)	NA	hit, no GO BP
GN012065	Chromosome_5A	655	2	24	46.717557251908396	0.7382707932184286	1.0869565217391304	24	0	1.1594202898550725	23	0	0	1	0	1.0439164866810655	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012066	Chromosome_5A	1164	1	31	40.37800687285223	0.6942434969986148	0	8	0	0	8	0	NA	NA	NA	0.54005400540054	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012067	Chromosome_5A	2710	6	27	33.247232472324725	0.3645848904302072	92.72727272727273	27	1	93.03201506591337	9	1	92.61119081779053	18	1	93.06965348267413	45	1	methylated (>=50%)	Q9UK41	Vacuolar protein sorting-associated protein 28 homolog (H-Vps28) (ESCRT-I complex subunit VPS28)	macroautophagy [GO:0016236]; membrane fission [GO:0090148]; multivesicular body assembly [GO:0036258]; negative regulation of protein ubiquitination [GO:0031397]; positive regulation of protein catabolic process [GO:0045732]; positive regulation of ubiquitin-dependent endocytosis [GO:2000397]; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN012068	Chromosome_5A	3089	4	30	34.18582065393331	0.3326763809462268	43.003851091142494	30	0.5666666666666667	56.06060606060606	13	0.7692307692307693	36.310679611650485	17	0.4117647058823529	1.1889596602972399	40	0	sparse (10-50%)	Q5M7F8	Ciliary microtubule inner protein 2C	NA	hit, no GO BP
GN012069	Chromosome_5A	8792	4	98	34.861237488626024	0.3679110334538331	69.87008024455483	95	0.7578947368421053	64.32926829268293	7	0.7142857142857143	70.24052181002854	88	0.7613636363636364	2.5020177562550443	47	0	methylated (>=50%)	Q5ZL21	Cyanocobalamin reductase / alkylcobalamin dealkylase (Alkylcobalamin:glutathione S-alkyltransferase) (EC 2.5.1.151) (CblC) (Cyanocobalamin reductase (cyanide-eliminating)) (EC 1.16.1.6) (Methylmalonic aciduria and homocystinuria type C protein) (MMACHC)	cobalamin metabolic process [GO:0009235]; demethylation [GO:0070988]; glutathione metabolic process [GO:0006749]	hit with GO BP
GN012070	Chromosome_5A	25900	11	405	34.084942084942085	0.5404488577308505	81.3605399662521	405	0.9481481481481482	87.22466960352423	28	0.9285714285714286	81.05415447341598	377	0.9496021220159151	23.581041544763018	25	0.24	methylated (>=50%)	Q7ZYB4	Polyadenylate-binding protein-interacting protein 1 (PABP-interacting protein 1) (PAIP-1) (Paip1 protein) (Poly(A)-binding protein-interacting protein 1) (XlPaip1)	regulation of translational initiation [GO:0006446]	hit with GO BP
GN012071	Chromosome_5A	20450	26	272	34.904645476772615	0.4411494121603188	85.6927878720321	272	0.9595588235294118	95.59663865546219	48	1	83.7241932250952	224	0.9508928571428571	92.73868220528911	63	1	methylated (>=50%)	Q3TKT4	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 (SMARCA4) (EC 3.6.4.-) (BRG1-associated factor 190A) (BAF190A) (Protein brahma homolog 1) (SNF2-beta) (Transcription activator BRG1)	aorta development [GO:0035904]; aortic smooth muscle cell differentiation [GO:0035887]; blastocyst growth [GO:0001832]; blastocyst hatching [GO:0001835]; blood vessel development [GO:0001568]; cell morphogenesis [GO:0000902]; chromatin remodeling [GO:0006338]; coronary vasculature development [GO:0060976]; definitive erythrocyte differentiation [GO:0060318]; embryonic hindlimb morphogenesis [GO:0035116]; embryonic organ morphogenesis [GO:0048562]; epidermis morphogenesis [GO:0048730]; extracellular matrix organization [GO:0030198]; forebrain development [GO:0030900]; gene expression [GO:0010467]; glial cell fate determination [GO:0007403]; heart development [GO:0007507]; heart trabecula formation [GO:0060347]; hindbrain development [GO:0030902]; host-mediated activation of viral transcription [GO:0043923]; in utero embryonic development [GO:0001701]; keratinocyte differentiation [GO:0030216]; lens fiber cell development [GO:0070307]; liver development [GO:0001889]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell differentiation [GO:0045596]; negative regulation of cell growth [GO:0030308]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; neural retina development [GO:0003407]; neurogenesis [GO:0022008]; nucleosome assembly [GO:0006334]; nucleosome disassembly [GO:0006337]; oligodendrocyte development [GO:0014003]; outflow tract morphogenesis [GO:0003151]; pharyngeal arch artery morphogenesis [GO:0061626]; positive regulation of cell differentiation [GO:0045597]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cell size [GO:0045793]; positive regulation of cold-induced thermogenesis [GO:0120162]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of glucose mediated signaling pathway [GO:1902661]; positive regulation of macrophage fusion [GO:0034241]; positive regulation of miRNA transcription [GO:1902895]; positive regulation of myelination [GO:0031643]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of signal transduction by p53 class mediator [GO:1901798]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of T cell differentiation [GO:0045582]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901838]; positive regulation of Wnt signaling pathway [GO:0030177]; regulation of cell migration [GO:0030334]; regulation of G0 to G1 transition [GO:0070316]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]; stem cell population maintenance [GO:0019827]; transcription initiation-coupled chromatin remodeling [GO:0045815]; vasculogenesis [GO:0001570]; ventricular septum development [GO:0003281]	hit with GO BP
GN012072	Chromosome_5A	8964	17	62	36.63543061133423	0.20633980085095008	84.59005597629239	61	0.9672131147540983	79.41534713763703	23	0.9565217391304348	86.5072202166065	38	0.9736842105263158	90.19939168638054	31	0.967741935483871	methylated (>=50%)	Q6DF94	Spindle and centriole-associated protein 1 (Coiled-coil domain-containing protein 52)	metaphase chromosome alignment [GO:0051310]; mitotic spindle assembly [GO:0090307]; regulation of centriole replication [GO:0046599]	hit with GO BP
GN012073	Chromosome_5A	12048	14	156	35.56606905710491	0.41104310042418957	87.09644566656482	155	0.896774193548387	82.15792646172393	31	0.8387096774193549	88.10049019607843	124	0.9112903225806451	57.37547892720306	50	0.6	methylated (>=50%)	Q9WVG6	Histone-arginine methyltransferase CARM1 (EC 2.1.1.319) (Coactivator-associated arginine methyltransferase 1) (Protein arginine N-methyltransferase 4)	apoptotic process [GO:0006915]; endochondral bone morphogenesis [GO:0060350]; estrogen receptor signaling pathway [GO:0030520]; gene expression [GO:0010467]; negative regulation of dendrite development [GO:2000171]; nuclear receptor-mediated steroid hormone signaling pathway [GO:0030518]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of epithelial cell apoptotic process [GO:1904037]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein localization to chromatin [GO:0071168]; protein methylation [GO:0006479]; regulation of DNA-templated transcription [GO:0006355]; regulation of growth plate cartilage chondrocyte proliferation [GO:0003420]; regulation of intracellular estrogen receptor signaling pathway [GO:0033146]; replication fork reversal [GO:0071932]; response to cAMP [GO:0051591]	hit with GO BP
GN012074	Chromosome_5A	1350	4	18	34.96296296296296	0.444468832309043	90.4147465437788	18	1	89.56521739130434	11	1	91.89873417721519	7	1	96.23713170039049	43	1	methylated (>=50%)	Q3T0E1	Exosome complex component RRP40 (Exosome component 3) (Ribosomal RNA-processing protein 40)	CUT catabolic process [GO:0071034]; DNA deamination [GO:0045006]; exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; isotype switching [GO:0045190]; nuclear polyadenylation-dependent rRNA catabolic process [GO:0071035]; nuclear-transcribed mRNA catabolic process [GO:0000956]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; TRAMP-dependent tRNA surveillance pathway [GO:0071038]; U4 snRNA 3'-end processing [GO:0034475]	hit with GO BP
GN012075	Chromosome_5A	6952	4	117	34.96835443037975	0.5505382981574811	72.78447823807026	116	0.8189655172413793	19.224806201550386	9	0.2222222222222222	76.67041619797526	107	0.8691588785046729	67.26431463273569	18	0.6666666666666666	methylated (>=50%)	Q8T3X9	Iron-sulfur cluster assembly 1 homolog, mitochondrial (Lethal (1) G0136) (Putative magnetoreceptor subunit MagR)	[4Fe-4S] cluster assembly [GO:0044572]; iron-sulfur cluster assembly [GO:0016226]; protein maturation [GO:0051604]; response to magnetism [GO:0071000]	hit with GO BP
GN012076	Chromosome_5A	9529	8	61	36.593556511701124	0.1912218785549658	74.53874538745387	60	0.9	80.46124279308135	38	0.9473684210526315	68.02816901408451	22	0.8181818181818182	50.997150997150996	7	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012077	Chromosome_5A	15941	16	112	35.022896932438364	0.2307598850822514	86.44694804102909	112	0.9642857142857143	87.24114896459587	44	0.9545454545454546	86.17977528089888	68	0.9705882352941176	19.602272727272727	41	0.24390243902439024	methylated (>=50%)	Q13233	Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) (EC 2.3.2.27)	cellular response to mechanical stimulus [GO:0071260]; Fc-epsilon receptor signaling pathway [GO:0038095]; MAPK cascade [GO:0000165]; protein phosphorylation [GO:0006468]	hit with GO BP
GN012078	Chromosome_5A	5652	4	46	36.64189667374381	0.24254840388910345	85.68030447193149	46	0.9565217391304348	87.84530386740332	5	1	85.47631441957314	41	0.9512195121951219	89.55906821963394	30	1	methylated (>=50%)	Q62925	Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1)	apoptotic mitochondrial changes [GO:0008637]; camera-type eye development [GO:0043010]; cellular response to mechanical stimulus [GO:0071260]; epithelial cell morphogenesis [GO:0003382]; eyelid development in camera-type eye [GO:0061029]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; morphogenesis of an epithelial sheet [GO:0002011]; negative regulation of actin filament bundle assembly [GO:0032232]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of JNK cascade [GO:0046330]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of MAP kinase activity [GO:0043406]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of viral transcription [GO:0050434]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; protein polyubiquitination [GO:0000209]; regulation of cell migration [GO:0030334]; transforming growth factor beta receptor signaling pathway [GO:0007179]; ubiquitin-dependent protein catabolic process [GO:0006511]; wound healing [GO:0042060]	hit with GO BP
GN012079	Chromosome_5A	6442	8	65	35.73424402359516	0.3164334078955323	78.47352862133835	65	0.9076923076923077	61.40684410646388	11	0.8181818181818182	81.28325508607199	54	0.9259259259259259	85.3012048192771	16	1	methylated (>=50%)	Q8N4L8	Coiled-coil domain-containing protein 24	NA	hit, no GO BP
GN012080	Chromosome_5A	33472	19	545	35.08604206500956	0.5303018675031383	45.279707757323976	460	0.4652173913043478	33.74446552814674	47	0.3829787234042553	46.75282714054927	413	0.4745762711864407	3.5714285714285716	1	0	sparse (10-50%)	Q7YU29	Dystrophin, isoform E (Protein detached)	establishment of cell polarity [GO:0030010]; imaginal disc-derived wing vein morphogenesis [GO:0008586]; imaginal disc-derived wing vein specification [GO:0007474]; maintenance of presynaptic active zone structure [GO:0048790]; muscle cell cellular homeostasis [GO:0046716]; muscle organ development [GO:0007517]; neuromuscular synaptic transmission [GO:0007274]; regulation of neurotransmitter secretion [GO:0046928]; regulation of short-term neuronal synaptic plasticity [GO:0048172]	hit with GO BP
GN012081	Chromosome_5A	900	3	35	40.333333333333336	0.9641873278236914	26.026272577996718	35	0.02857142857142857	11.494252873563218	2	0	27.144120247568523	33	0.030303030303030304	0.4295942720763723	35	0	sparse (10-50%)	Q27350	Protein sine oculis	Bolwig's organ morphogenesis [GO:0001746]; circadian rhythm [GO:0007623]; compound eye development [GO:0048749]; compound eye morphogenesis [GO:0001745]; entrainment of circadian clock [GO:0009649]; glial cell migration [GO:0008347]; insect visual primordium formation [GO:0001744]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; ring gland development [GO:0035271]; spermatogenesis [GO:0007283]	hit with GO BP
GN012082	Chromosome_5A	9497	13	58	33.4526692639781	0.21931628151427798	69.00133155792277	58	0.7931034482758621	72.03994293865905	14	0.7857142857142857	68.30386378519974	44	0.7954545454545454	8.772874058127018	19	0	methylated (>=50%)	Q9WYJ1	L-threonine ammonia-lyase (EC 4.3.1.19) (L-serine ammonia-lyase) (EC 4.3.1.17) (Threonine dehydratase)	L-serine catabolic process [GO:0006565]; L-threonine catabolic process [GO:0006567]	hit with GO BP
GN012083	Chromosome_5A	924	1	34	40.692640692640694	0.8945585010962727	0.547945205479452	34	0	0.547945205479452	34	0	NA	NA	NA	0.7004310344827587	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012084	Chromosome_5A	4609	6	148	37.10132349750488	0.9334862385321101	0.8738601823708206	148	0	0.8526764566556134	43	0	0.881590319792567	105	0	1.094890510948905	27	0	unmethylated (<10%)	Q2KIR8	L-threonine 3-dehydrogenase, mitochondrial (EC 1.1.1.103)	L-threonine catabolic process [GO:0006567]	hit with GO BP
GN012085	Chromosome_5A	936	2	43	41.13247863247863	1.086491739552964	0.3405994550408719	43	0	0.3614457831325301	29	0	0.31347962382445144	14	0	14.044943820224718	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012091	Chromosome_5A	4111	7	40	33.957674531744104	0.3385747493735626	83.28553871364196	40	0.975	91.22257053291536	14	1	80.47698280643372	26	0.9615384615384616	24.09476978095664	49	0.12244897959183673	methylated (>=50%)	Q9R1K5	Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; DNA synthesis involved in mitotic DNA replication [GO:1904860]; lens fiber cell differentiation [GO:0070306]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; negative regulation of cellular senescence [GO:2000773]; positive regulation of anaphase-promoting complex-dependent catabolic process [GO:1905786]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein catabolic process [GO:0030163]; protein ubiquitination [GO:0016567]; regulation of meiotic nuclear division [GO:0040020]; thymidine biosynthetic process [GO:0046105]	hit with GO BP
GN012090	Chromosome_5A	663	1	46	46.30467571644042	1.295471922521451	0.9945750452079566	46	0	0.9945750452079566	46	0	NA	NA	NA	0.5907626208378088	51	0	unmethylated (<10%)	Q90YI8	T-cell acute lymphocytic leukemia protein 1 (TAL-1) (FrSCL) (Stem cell protein)	angiogenesis [GO:0001525]; artery morphogenesis [GO:0048844]; definitive hemopoiesis [GO:0060216]; endocardium formation [GO:0060214]; erythrocyte differentiation [GO:0030218]; hemangioblast cell differentiation [GO:0060217]; hematopoietic stem cell differentiation [GO:0060218]; myeloid cell differentiation [GO:0030099]; primitive hemopoiesis [GO:0060215]; vasculogenesis [GO:0001570]	hit with GO BP
GN012089	Chromosome_5A	11607	15	102	34.660118893771	0.29290504733827943	90.46954904695491	102	0.9509803921568627	89.95605775266792	29	0.9655172413793104	90.63786008230453	73	0.9452054794520548	16.395939086294415	28	0.07142857142857142	methylated (>=50%)	Q6GPP0	WD repeat-containing protein 70	NA	hit, no GO BP
GN012088	Chromosome_5A	5664	3	72	36.034604519774014	0.39165685462881683	85.31990906138357	70	0.9571428571428572	85.90203106332139	16	0.9375	85.10258697591436	54	0.9629629629629629	58.292367399741266	46	0.6304347826086957	methylated (>=50%)	Q9H553	Alpha-1,3/1,6-mannosyltransferase ALG2 (EC 2.4.1.132) (EC 2.4.1.257) (Asparagine-linked glycosylation protein 2 homolog) (GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase) (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; glycoprotein biosynthetic process [GO:0009101]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN012087	Chromosome_5A	3909	5	53	33.793809158352516	0.4810127463954865	91.79224973089343	53	1	97	8	1	90.98258706467662	45	1	94.88139825218477	21	1	methylated (>=50%)	Q2TA24	V-type proton ATPase 21 kDa proteolipid subunit c'' (V-ATPase 21 kDa proteolipid subunit c'') (Vacuolar proton pump 21 kDa proteolipid subunit c'')	pH reduction [GO:0045851]; proton transmembrane transport [GO:1902600]	hit with GO BP
GN012086	Chromosome_5A	554	2	49	56.67870036101083	1.1067351598173516	83.18042813455658	49	0.9387755102040817	83.18042813455658	49	0.9387755102040817	NA	NA	NA	64.48979591836735	10	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012092	Chromosome_5A	17932	21	169	34.07316529109971	0.33187682446899847	72.80245022970904	168	0.8095238095238095	74.1396933560477	52	0.8269230769230769	72.23032069970846	116	0.8017241379310345	4.73733583489681	35	0.08571428571428572	methylated (>=50%)	Q66KE8	Coiled-coil domain-containing protein 78 (xCCDC78)	de novo centriole assembly involved in multi-ciliated epithelial cell differentiation [GO:0098535]	hit with GO BP
GN012093	Chromosome_5A	9170	10	120	35.027262813522356	0.42690278999827747	90.72424034726981	118	0.9915254237288136	89.95215311004785	18	0.9444444444444444	90.85333333333334	100	1	88.69885982562039	44	0.9545454545454546	methylated (>=50%)	Q2KJ81	AP-1 complex subunit mu-1 (AP-mu chain family member mu1A) (Adaptor protein complex AP-1 subunit mu-1) (Adaptor-related protein complex 1 subunit mu-1) (Clathrin assembly protein complex 1 mu-1 medium chain 1) (Golgi adaptor HA1/AP1 adaptin mu-1 subunit) (Mu-adaptin 1) (Mu1A-adaptin)	Golgi to vacuole transport [GO:0006896]; intracellular protein transport [GO:0006886]	hit with GO BP
GN012094	Chromosome_5A	678	1	31	48.525073746312685	0.776890663118208	0.6053268765133172	29	0	0.6053268765133172	29	0	NA	NA	NA	0.5134281200631912	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012095	Chromosome_5A	14880	10	181	34.22043010752688	0.41629956355690917	85.95804476563283	179	0.9385474860335196	88.66571018651364	16	0.9375	85.75437081804446	163	0.9386503067484663	90.01225490196079	17	0.8823529411764706	methylated (>=50%)	P09057	Ornithine decarboxylase (ODC) (EC 4.1.1.17)	kidney development [GO:0001822]; polyamine metabolic process [GO:0006595]; positive regulation of cell population proliferation [GO:0008284]; putrescine biosynthetic process [GO:0009446]; regulation of protein catabolic process [GO:0042176]; response to virus [GO:0009615]; spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]	hit with GO BP
GN012096	Chromosome_5A	961	2	42	46.72216441207076	0.8250950570342205	0.43956043956043955	42	0	0.40214477211796246	34	0	0.6097560975609756	8	0	2.095808383233533	73	0	unmethylated (<10%)	F4JL28	Chromatin remodeling protein EBS (Protein EARLY BOLTING IN SHORT DAYS)	negative regulation of gene expression, epigenetic [GO:0045814]; negative regulation of long-day photoperiodism, flowering [GO:0048579]; post-embryonic development [GO:0009791]; regulation of photoperiodism, flowering [GO:2000028]; seed germination [GO:0009845]	hit with GO BP
GN012097	Chromosome_5A	1851	3	20	32.03673689897353	0.42871039466370203	61.72284644194757	20	0.75	81.57894736842105	1	1	60.524225575853855	19	0.7368421052631579	56.50246305418719	57	0.45614035087719296	methylated (>=50%)	Q5D016	Prefoldin subunit 1	NA	hit, no GO BP
GN012098	Chromosome_5A	405	1	12	43.45679012345679	0.6296152351340847	96.58246656760772	12	1	96.58246656760772	12	1	NA	NA	NA	90.86892488954345	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013305	Chromosome_5A	1298	3	6	33.97534668721109	0.16186556927297668	NA	0	NA	NA	NA	NA	NA	NA	NA	55.701492537313435	26	0.38461538461538464	NA	NA	NA	NA	no Swiss-Prot hit
GN012099	Chromosome_5A	10711	8	159	34.37587526841565	0.5026839540106118	68.5282718871112	126	0.8253968253968254	86.44366197183099	26	0.8461538461538461	64.87618136140686	100	0.82	0	6	0	methylated (>=50%)	Q4FZQ6	Pre-mRNA-splicing factor 38A	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN012100	Chromosome_5A	28069	26	281	35.4091702590046	0.3198354196019963	85.45330140266849	241	0.966804979253112	85.44251447477254	24	1	85.4542742055796	217	0.9631336405529954	81.22065727699531	11	1	methylated (>=50%)	Q5UQ88	Probable ubiquitin-conjugating enzyme E2 R521 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme R521) (Ubiquitin carrier protein) (Ubiquitin-protein ligase)	DNA protection [GO:0042262]; protein ubiquitination [GO:0016567]	hit with GO BP
GN012101	Chromosome_5A	28937	18	374	33.97380516294018	0.44843585836729544	77.86918065009282	374	0.8689839572192514	69.1768826619965	18	0.8888888888888888	78.2461737115947	356	0.8679775280898876	9.734513274336283	60	0	methylated (>=50%)	Q5XHH9	Tetratricopeptide repeat protein 39B (TPR repeat protein 39B)	NA	hit, no GO BP
GN012102	Chromosome_5A	9139	9	115	34.56614509246088	0.4215439719554946	73.04125789544416	114	0.7894736842105263	31.51458137347131	20	0.35	79.9623706491063	94	0.8829787234042553	33.909415971394516	21	0.38095238095238093	methylated (>=50%)	Q922Q5	Adenosine 3'-phospho 5'-phosphosulfate transporter 2 (Solute carrier family 35 member B3)	3'-phosphoadenosine 5'-phosphosulfate transport [GO:0046963]; 5'-adenylyl sulfate transmembrane transport [GO:1902558]; peptidyl-tyrosine sulfation [GO:0006478]	hit with GO BP
GN012103	Chromosome_5A	15200	11	161	34.2171052631579	0.3642139277596736	81.08469142399144	161	0.9316770186335404	64.99656829100893	25	0.76	83.48342202210397	136	0.9632352941176471	0.7039644312708411	55	0	methylated (>=50%)	F1RB95	E3 ubiquitin-protein ligase RNF14 (EC 2.3.2.31) (RING finger protein 14)	protein ubiquitination [GO:0016567]; protein-RNA covalent cross-linking repair [GO:0160127]; regulation of canonical Wnt signaling pathway [GO:0060828]; rescue of stalled cytosolic ribosome [GO:0072344]	hit with GO BP
GN012104	Chromosome_5A	8283	8	264	36.8827719425329	0.9389196750832773	1.0382004525489152	264	0	1.1747953008187968	63	0	1.0067938119014488	201	0	3.910614525139665	53	0	unmethylated (<10%)	Q09477	Zinc finger protein dpff-1	apoptotic process [GO:0006915]; chromatin remodeling [GO:0006338]; meiotic cell cycle [GO:0051321]; positive regulation of double-strand break repair [GO:2000781]; regulation of DNA-templated transcription [GO:0006355]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of mitotic metaphase/anaphase transition [GO:0030071]; regulation of nucleotide-excision repair [GO:2000819]; response to heat [GO:0009408]	hit with GO BP
GN012110	Chromosome_5A	10748	20	61	34.76925939709714	0.188782273882702	69.70493718959976	60	0.8166666666666667	71.98347107438016	24	0.7916666666666666	68.4591052869408	36	0.8333333333333334	60.55612770339856	26	0.8076923076923077	methylated (>=50%)	Q9NY47	Voltage-dependent calcium channel subunit alpha-2/delta-2 (Voltage-gated calcium channel subunit alpha-2/delta-2) [Cleaved into: Voltage-dependent calcium channel subunit alpha-2-2; Voltage-dependent calcium channel subunit delta-2]	NA	hit, no GO BP
GN012109	Chromosome_5A	12670	13	151	32.73875295974744	0.448146156217411	88.26249067859806	112	0.8928571428571429	95.09677419354838	25	1	86.20756547041707	87	0.8620689655172413	95.35762483130904	50	1	methylated (>=50%)	Q9BRS2	Serine/threonine-protein kinase RIO1 (EC 2.7.11.1) (EC 3.6.1.-) (RIO kinase 1)	maturation of SSU-rRNA [GO:0030490]; positive regulation of rRNA processing [GO:2000234]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN012108	Chromosome_5A	4119	6	38	33.673221655741685	0.325486705788898	76.54770575382375	38	0.8421052631578947	86.82170542635659	2	1	76.04126862820023	36	0.8333333333333334	79.29475587703436	20	1	methylated (>=50%)	A6H7C2	Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly protein PEX3)	protein import into peroxisome membrane [GO:0045046]	hit with GO BP
GN012107	Chromosome_5A	1125	1	14	39.644444444444446	0.317489114658926	33.22475570032573	14	0.2857142857142857	33.22475570032573	14	0.2857142857142857	NA	NA	NA	1.1398509425690486	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020389	Chromosome_5A	399	1	10	46.365914786967416	0.4686398872445384	70.3962703962704	10	1	70.3962703962704	10	1	NA	NA	NA	86.31397354801611	40	0.95	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012106	Chromosome_5A	1149	1	21	41.253263707571804	0.4300686213349969	1.901743264659271	21	0	1.901743264659271	21	0	NA	NA	NA	18.722358722358724	58	0.2413793103448276	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012113	Chromosome_5A	6152	9	54	35.354356306892065	0.281252381105578	85.95065312046444	54	1	94.8051948051948	11	1	84.02262283492401	43	1	18.396418396418397	34	0.20588235294117646	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012112	Chromosome_5A	645	1	7	41.55038759689923	0.25463876825898146	96.52509652509653	7	1	96.52509652509653	7	1	NA	NA	NA	53.52190793122573	32	0.375	methylated (>=50%)	Q9CRA8	Exosome complex component RRP46 (Exosome component 5) (Ribosomal RNA-processing protein 46)	defense response to virus [GO:0051607]; DNA deamination [GO:0045006]; mRNA catabolic process [GO:0006402]; nuclear mRNA surveillance [GO:0071028]; poly(A)-dependent snoRNA 3'-end processing [GO:0071051]; RNA catabolic process [GO:0006401]; RNA processing [GO:0006396]; rRNA catabolic process [GO:0016075]; U4 snRNA 3'-end processing [GO:0034475]	hit with GO BP
GN012124	Chromosome_5A	16616	10	143	34.05151661049591	0.2973567887757476	84.01247610423584	141	0.9078014184397163	67.83479349186483	24	0.7083333333333334	87.11185709147584	117	0.9487179487179487	1.2345679012345678	36	0	methylated (>=50%)	A0A0G2JZ79	NAD-dependent protein deacetylase sirtuin-1 (EC 2.3.1.286) (NAD-dependent protein deacylase sirtuin-1) (EC 2.3.1.-) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]	angiogenesis [GO:0001525]; behavioral response to starvation [GO:0042595]; cardiac muscle cell apoptotic process [GO:0010659]; cellular response to amyloid-beta [GO:1904646]; cellular response to antibiotic [GO:0071236]; cellular response to curcumin [GO:1904644]; cellular response to glucose starvation [GO:0042149]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to hypoxia [GO:0071456]; cellular response to ionizing radiation [GO:0071479]; cellular response to leukemia inhibitory factor [GO:1990830]; cellular response to resveratrol [GO:1904639]; cellular response to rotenone [GO:1904648]; cellular response to starvation [GO:0009267]; cellular response to tumor necrosis factor [GO:0071356]; cellular response to vitamin B3 [GO:0071303]; cholesterol homeostasis [GO:0042632]; chromatin organization [GO:0006325]; circadian regulation of gene expression [GO:0032922]; circadian rhythm [GO:0007623]; DNA damage response [GO:0006974]; DNA repair-dependent chromatin remodeling [GO:0140861]; DNA synthesis involved in DNA repair [GO:0000731]; endoplasmic reticulum unfolded protein response [GO:0030968]; energy homeostasis [GO:0097009]; fatty acid homeostasis [GO:0055089]; heterochromatin formation [GO:0031507]; intracellular glucose homeostasis [GO:0001678]; intracellular triglyceride homeostasis [GO:0035356]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; leptin-mediated signaling pathway [GO:0033210]; macrophage differentiation [GO:0030225]; maintenance of nucleus location [GO:0051658]; mitochondrion organization [GO:0007005]; negative regulation of adipose tissue development [GO:1904178]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of apoptotic process [GO:0043066]; negative regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902424]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cardiac muscle cell apoptotic process [GO:0010667]; negative regulation of cell cycle [GO:0045786]; negative regulation of cellular response to testosterone stimulus [GO:2000655]; negative regulation of cellular senescence [GO:2000773]; negative regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043518]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of fibroblast apoptotic process [GO:2000270]; negative regulation of gene expression [GO:0010629]; negative regulation of growth hormone secretion [GO:0060125]; negative regulation of hippo signaling [GO:0035331]; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:1902166]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [GO:1902176]; negative regulation of peptidyl-lysine acetylation [GO:2000757]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of phosphorylation [GO:0042326]; negative regulation of prostaglandin biosynthetic process [GO:0031393]; negative regulation of protein acetylation [GO:1901984]; negative regulation of protein localization to nucleus [GO:1900181]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; negative regulation of signal transduction by p53 class mediator [GO:1901797]; negative regulation of TOR signaling [GO:0032007]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; negative regulation of triglyceride biosynthetic process [GO:0010868]; negative regulation of tumor necrosis factor production [GO:0032720]; neuron apoptotic process [GO:0051402]; ovulation from ovarian follicle [GO:0001542]; peptidyl-lysine acetylation [GO:0018394]; positive regulation of adaptive immune response [GO:0002821]; positive regulation of adipose tissue development [GO:1904179]; positive regulation of angiogenesis [GO:0045766]; positive regulation of apoptotic process [GO:0043065]; positive regulation of ATP biosynthetic process [GO:2001171]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of cAMP-dependent protein kinase activity [GO:2000481]; positive regulation of cell growth involved in cardiac muscle cell development [GO:0061051]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cellular senescence [GO:2000774]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902237]; positive regulation of endothelial cell proliferation [GO:0001938]; positive regulation of gene expression [GO:0010628]; positive regulation of gluconeogenesis [GO:0045722]; positive regulation of granulosa cell apoptotic process [GO:1904710]; positive regulation of heart rate [GO:0010460]; positive regulation of insulin receptor signaling pathway [GO:0046628]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of macroautophagy [GO:0016239]; positive regulation of macrophage apoptotic process [GO:2000111]; positive regulation of macrophage cytokine production [GO:0060907]; positive regulation of MHC class II biosynthetic process [GO:0045348]; positive regulation of mitochondrial membrane potential [GO:0010918]; positive regulation of neuron projection development [GO:0010976]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein deacetylation [GO:0090312]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of skeletal muscle cell proliferation [GO:0014858]; positive regulation of smooth muscle cell differentiation [GO:0051152]; positive regulation of thyroid-stimulating hormone secretion [GO:2000614]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of triglyceride catabolic process [GO:0010898]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deacetylation [GO:0006476]; protein depropionylation [GO:0106230]; protein destabilization [GO:0031648]; protein ubiquitination [GO:0016567]; pyrimidine dimer repair by nucleotide-excision repair [GO:0000720]; rDNA heterochromatin formation [GO:0000183]; regulation of apoptotic process [GO:0042981]; regulation of bile acid biosynthetic process [GO:0070857]; regulation of brown fat cell differentiation [GO:0090335]; regulation of cell population proliferation [GO:0042127]; regulation of centrosome duplication [GO:0010824]; regulation of endodeoxyribonuclease activity [GO:0032071]; regulation of glucose metabolic process [GO:0010906]; regulation of lipid storage [GO:0010883]; regulation of mitotic cell cycle [GO:0007346]; regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035358]; regulation of smooth muscle cell apoptotic process [GO:0034391]; regulation of transcription by glucose [GO:0046015]; response to cocaine [GO:0042220]; response to ethanol [GO:0045471]; response to fluoride [GO:1902617]; response to hydrogen peroxide [GO:0042542]; response to insulin [GO:0032868]; response to kainic acid [GO:1904373]; response to leptin [GO:0044321]; response to mycotoxin [GO:0010046]; response to nutrient levels [GO:0031667]; response to oxidative stress [GO:0006979]; response to resveratrol [GO:1904638]; single strand break repair [GO:0000012]; spermatogenesis [GO:0007283]; stress-induced premature senescence [GO:0090400]; subtelomeric heterochromatin formation [GO:0031509]; transforming growth factor beta receptor signaling pathway [GO:0007179]; triglyceride mobilization [GO:0006642]; UV-damage excision repair [GO:0070914]; vasodilation [GO:0042311]; white fat cell differentiation [GO:0050872]	hit with GO BP
GN012123	Chromosome_5A	9209	5	89	34.520577695732435	0.32451991225777843	0.57636887608069165	6	0	0.7194244604316546	4	0	0	2	0	1.0947368421052632	57	0	unmethylated (<10%)	Q9UKB3	DnaJ homolog subfamily C member 12 (J domain-containing protein 1)	NA	hit, no GO BP
GN012122	Chromosome_5A	433	2	15	46.4203233256351	0.6438342585249802	NA	0	NA	NA	NA	NA	NA	NA	NA	17.391304347826086	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012121	Chromosome_5A	189	1	12	52.91005291005291	0.9086538461538461	NA	0	NA	NA	NA	NA	NA	NA	NA	17.391304347826086	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012120	Chromosome_5A	12069	13	135	34.22818791946309	0.384342203654909	86.05434186829535	135	0.9703703703703703	94.41391941391942	25	1	84.32983848115613	110	0.9636363636363636	92.15784215784215	52	1	methylated (>=50%)	Q29S22	Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)	extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; RNA splicing [GO:0008380]; rRNA processing [GO:0006364]	hit with GO BP
GN012119	Chromosome_5A	14034	19	178	33.99600969075103	0.44041990289807187	86.02473621689609	174	0.9252873563218391	85.13238289205702	26	0.8846153846153846	86.16668016522232	148	0.9324324324324325	78.49829351535836	28	0.7857142857142857	methylated (>=50%)	Q94AM1	Organellar oligopeptidase A, chloroplastic/mitochondrial (AtOOP) (EC 3.4.24.70) (Thimet metalloendopeptidase 1) (Zincin-like metalloproteases family protein 1)	proteolysis [GO:0006508]	hit with GO BP
GN012118	Chromosome_5A	6271	5	56	35.4169988837506	0.2857598541809068	83.01428137344273	56	0.9285714285714286	84.78664192949907	7	1	82.6671511627907	49	0.9183673469387755	73.28072153325817	26	0.8461538461538461	methylated (>=50%)	Q9KPS0	DNA-binding transcriptional regulator BolA	DNA-templated transcription [GO:0006351]	hit with GO BP
GN012117	Chromosome_5A	5819	5	81	34.86853411239044	0.45797083143054246	75.24716221164408	81	0.7901234567901234	49.224806201550386	6	0.6666666666666666	76.53727901614143	75	0.8	58.701298701298704	30	0.6333333333333333	methylated (>=50%)	Q6DJF8	Histone-arginine methyltransferase METTL23 (EC 2.1.1.319) (Methyltransferase-like protein 23)	epigenetic regulation of gene expression [GO:0040029]	hit with GO BP
GN012116	Chromosome_5A	17322	12	265	33.558480544971715	0.5442539099875862	80.83371788955546	264	0.9431818181818182	69.11250873515024	24	0.8333333333333334	81.7618415227977	240	0.9541666666666667	73.83442265795208	39	0.7435897435897436	methylated (>=50%)	Q5RBD5	Isovaleryl-CoA dehydrogenase, mitochondrial (IVD) (EC 1.3.8.4) (Butyryl-CoA dehydrogenase) (EC 1.3.8.1)	branched-chain amino acid catabolic process [GO:0009083]; L-leucine catabolic process [GO:0006552]	hit with GO BP
GN012115	Chromosome_5A	23857	25	221	34.463679423230076	0.316137628715799	66.63066268504987	220	0.7863636363636364	69.96215704824976	42	0.8809523809523809	66.1137614678899	178	0.7640449438202247	89.81361074989164	49	0.9795918367346939	methylated (>=50%)	Q9UKN7	Unconventional myosin-XV (Unconventional myosin-15)	endocytosis [GO:0006897]; response to light stimulus [GO:0009416]; sensory perception of sound [GO:0007605]	hit with GO BP
GN012114	Chromosome_5A	23962	25	327	37.67214756698105	0.3853911879124208	82.53444823931221	323	0.9535603715170279	79.4486215538847	69	0.9565217391304348	83.14187046303475	254	0.952755905511811	90.63752276867031	45	1	methylated (>=50%)	P12276	Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100); 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.39); Acyl-[acyl-carrier-protein] hydrolase (EC 3.1.2.14)]	fatty acid biosynthetic process [GO:0006633]; lactate metabolic process [GO:0006089]; positive regulation of appetite [GO:0032100]	hit with GO BP
GN012125	Chromosome_5A	1059	2	22	34.37204910292729	0.7088353413654619	1.4746543778801844	22	0	1.6189290161892902	17	0	1.0638297872340425	5	0	0.9827177228058286	48	0	unmethylated (<10%)	P36189	Fatty acid synthase (EC 2.3.1.85)	fatty acid biosynthetic process [GO:0006633]	hit with GO BP
GN012126	Chromosome_5A	5507	8	114	37.91538042491375	0.5767594065918721	90.31013503487165	113	0.9823008849557522	97.51732101616628	32	1	87.81705612143	81	0.9753086419753086	81.08419838523645	14	0.9285714285714286	methylated (>=50%)	Q9NQ29	Putative RNA-binding protein Luc7-like 1 (Putative SR protein LUC7B1) (SR+89)	mRNA splice site recognition [GO:0006376]	hit with GO BP
GN012127	Chromosome_5A	5610	3	139	37.23707664884135	0.7150363116197183	1.3854089904200442	137	0	1.4705882352941178	35	0	1.3613159387407827	102	0	74.25454545454545	31	0.8387096774193549	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001388	Chromosome_5A	354	1	10	38.983050847457626	0.7436974789915967	2.872531418312388	10	0	2.872531418312388	10	0	NA	NA	NA	1.1645569620253164	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012128	Chromosome_5A	534	1	5	38.951310861423224	0.25734939759036146	92.5925925925926	5	1	92.5925925925926	5	1	NA	NA	NA	94.2422236929186	25	1	methylated (>=50%)	Q2KHW8	Gem-associated protein 6 (Gemin-6)	spliceosomal complex assembly [GO:0000245]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN012129	Chromosome_5A	4606	11	24	31.762917933130698	0.2083102493074792	81.39232270657125	24	1	85.18518518518519	9	1	79.4921875	15	1	91.6454081632653	26	1	methylated (>=50%)	Q7Z3J2	VPS35 endosomal protein-sorting factor-like (Esophageal cancer-associated protein)	endocytic recycling [GO:0032456]; Golgi to plasma membrane transport [GO:0006893]	hit with GO BP
GN012130	Chromosome_5A	17712	20	169	35.36020776874435	0.3066845814495934	90.44492355938847	166	0.9879518072289156	92.60752688172043	26	1	90.07572280862782	140	0.9857142857142858	94.70493128536782	35	1	methylated (>=50%)	Q9ER34	Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)	citrate metabolic process [GO:0006101]; isocitrate metabolic process [GO:0006102]; liver development [GO:0001889]; response to isolation stress [GO:0035900]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN012131	Chromosome_5A	3679	3	70	37.23837999456374	0.5623060815871124	84.86865779057214	70	0.9571428571428572	90.86444007858546	15	0.9333333333333333	83.52422907488987	55	0.9636363636363636	95.20255863539445	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012132	Chromosome_5A	24369	11	316	35.88575649390619	0.40336233228645446	88.18346836675964	309	0.9773462783171522	92.42424242424242	13	1	88.0293645331498	296	0.9763513513513513	94.70842332613391	15	1	methylated (>=50%)	P92208	Stress-activated protein kinase JNK (dJNK) (EC 2.7.11.24) (Protein basket)	antibacterial humoral response [GO:0019731]; axon extension [GO:0048675]; axon guidance [GO:0007411]; cellular response to arsenic-containing substance [GO:0071243]; cellular response to cadmium ion [GO:0071276]; cellular response to oxidative stress [GO:0034599]; cellular response to reactive oxygen species [GO:0034614]; chorion micropyle formation [GO:0046844]; collateral sprouting of injured axon [GO:0048674]; defense response to Gram-negative bacterium [GO:0050829]; determination of digestive tract left/right asymmetry [GO:0071907]; dorsal appendage formation [GO:0046843]; dorsal closure [GO:0007391]; dorsal closure, spreading of leading edge cells [GO:0007395]; embryonic anterior midgut (ectodermal) morphogenesis [GO:0048615]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity regulating cell shape [GO:0071963]; follicle cell of egg chamber development [GO:0030707]; imaginal disc fusion, thorax closure [GO:0046529]; imaginal disc-derived male genitalia morphogenesis [GO:0048803]; JNK cascade [GO:0007254]; long-term memory [GO:0007616]; melanization defense response [GO:0035006]; mushroom body development [GO:0016319]; neuron development [GO:0048666]; neuron projection morphogenesis [GO:0048812]; peptidoglycan recognition protein signaling pathway [GO:0061057]; positive regulation of apoptotic process [GO:0043065]; positive regulation of autophagy [GO:0010508]; positive regulation of border follicle cell migration [GO:1903688]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron remodeling [GO:1904801]; positive regulation of programmed cell death [GO:0043068]; regulation of cellular response to phosphate starvation [GO:0140255]; regulation of wound healing, spreading of epidermal cells [GO:1903689]; response to heat [GO:0009408]; response to oxidative stress [GO:0006979]; tumor necrosis factor-mediated signaling pathway [GO:0033209]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]; wound healing [GO:0042060]; wound healing, spreading of epidermal cells [GO:0035313]	hit with GO BP
GN012133	Chromosome_5A	15237	5	134	34.2521493732362	0.29996147932327016	84.83306836248013	134	1	87.15529753265602	28	1	84.4358942534442	106	1	16.643804298125286	33	0.18181818181818182	methylated (>=50%)	Q8N264	Rho GTPase-activating protein 24 (Filamin-A-associated RhoGAP) (FilGAP) (RAC1- and CDC42-specific GTPase-activating protein of 72 kDa) (RC-GAP72) (Rho-type GTPase-activating protein 24) (RhoGAP of 73 kDa) (Sarcoma antigen NY-SAR-88) (p73RhoGAP)	negative regulation of Rac protein signal transduction [GO:0035021]; negative regulation of ruffle assembly [GO:1900028]; signal transduction [GO:0007165]; wound healing, spreading of epidermal cells [GO:0035313]	hit with GO BP
GN012134	Chromosome_5A	24736	10	419	36.129527813712805	0.5199396804024518	82.0115628731226	395	0.9670886075949368	86.24841571609632	33	1	81.7905316053954	362	0.9640883977900553	86.71679197994987	14	0.9285714285714286	methylated (>=50%)	E1JIT7	PH and SEC7 domain-containing protein (Exchange factor for ADP-ribosylation factor guanine nucleotide factor 6) (Exchange factor for Arf 6)	axoneme assembly [GO:0035082]; compound eye morphogenesis [GO:0001745]; negative regulation of microtubule polymerization [GO:0031115]; positive regulation of ARF protein signal transduction [GO:0032014]; response to alcohol [GO:0097305]	hit with GO BP
GN012159	Chromosome_5A	42479	45	441	35.9118623319758	0.32385094713913415	81.92499458053328	420	0.9238095238095239	81.21878121878122	64	0.921875	82.03070481507328	356	0.9241573033707865	23.777883246321785	40	0.275	methylated (>=50%)	A0JP70	WD repeat-containing protein 90	centriole elongation [GO:0061511]; cilium assembly [GO:0060271]	hit with GO BP
GN012158	Chromosome_5A	20827	11	265	34.25841455802564	0.4350431570555492	81.91251160504615	265	0.8603773584905661	50.287907869481764	29	0.4827586206896552	84.86386434201098	236	0.9067796610169492	57.64316138192144	32	0.46875	methylated (>=50%)	Q503W7	Outer mitochondrial transmembrane helix translocase (EC 7.4.2.-) (ATPase family AAA domain-containing protein 1-B)	extraction of mislocalized protein from mitochondrial outer membrane [GO:0140570]	hit with GO BP
GN012157	Chromosome_5A	513	1	24	46.58869395711501	0.8623056450483261	0.4291845493562232	15	0	0.4291845493562232	15	0	NA	NA	NA	0.5359394703656999	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012156	Chromosome_5A	8219	5	103	34.83392140163037	0.4135537827975164	87.53364499220852	103	0.9514563106796117	75.98784194528875	10	1	88.72051241993438	93	0.946236559139785	75.67723342939482	34	1	methylated (>=50%)	Q8TBZ6	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)	tRNA methylation [GO:0030488]; tRNA N1-guanine methylation [GO:0002939]	hit with GO BP
GN012155	Chromosome_5A	27918	19	338	35.35711727201089	0.38746961949378345	73.80821667124165	336	0.8660714285714286	77.37003058103976	28	0.9642857142857143	73.5202492211838	308	0.8571428571428571	67.12962962962963	13	0.9230769230769231	methylated (>=50%)	A0A0R4IVV0	Microsomal triglyceride transfer protein large subunit	cholesterol homeostasis [GO:0042632]; digestion [GO:0007586]; lipid metabolic process [GO:0006629]; lipid transport [GO:0006869]; lipoprotein biosynthetic process [GO:0042158]; lipoprotein metabolic process [GO:0042157]; lipoprotein transport [GO:0042953]; long-chain fatty acid transport [GO:0015909]; medium-chain fatty acid transport [GO:0001579]; plasma lipoprotein particle assembly [GO:0034377]; protein secretion [GO:0009306]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN012154	Chromosome_5A	4202	5	44	36.55402189433603	0.3144487435690293	53.85925085130533	42	0.5714285714285714	44.87577639751553	19	0.47368421052631576	59.03398926654741	23	0.6521739130434783	0.7112970711297071	57	0	methylated (>=50%)	B2RVL6	Zinc finger CCHC domain-containing protein 24	NA	hit, no GO BP
GN012153	Chromosome_5A	57639	20	593	34.65708981765818	0.34306923339610873	61.1887900248169	578	0.6695501730103807	67.53846153846153	33	0.7878787878787878	60.79055705647755	545	0.6623853211009174	87.91969539633091	36	1	methylated (>=50%)	P97767	Protein phosphatase EYA1 (EC 3.1.3.16) (EC 3.1.3.48) (Eyes absent homolog 1)	animal organ morphogenesis [GO:0009887]; aorta morphogenesis [GO:0035909]; branching involved in ureteric bud morphogenesis [GO:0001658]; cell differentiation [GO:0030154]; cell fate commitment [GO:0045165]; cochlea morphogenesis [GO:0090103]; double-strand break repair [GO:0006302]; embryonic skeletal system morphogenesis [GO:0048704]; inner ear morphogenesis [GO:0042472]; mesodermal cell fate specification [GO:0007501]; metanephros development [GO:0001656]; middle ear morphogenesis [GO:0042474]; negative regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001240]; neuron fate specification [GO:0048665]; otic vesicle development [GO:0071599]; otic vesicle morphogenesis [GO:0071600]; outer ear morphogenesis [GO:0042473]; outflow tract morphogenesis [GO:0003151]; pattern specification process [GO:0007389]; pharyngeal system development [GO:0060037]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of secondary heart field cardioblast proliferation [GO:0072513]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein dephosphorylation [GO:0006470]; protein sumoylation [GO:0016925]; regulation of neuron differentiation [GO:0045664]; response to ionizing radiation [GO:0010212]; semicircular canal morphogenesis [GO:0048752]; striated muscle tissue development [GO:0014706]; ureteric bud development [GO:0001657]	hit with GO BP
GN012152	Chromosome_5A	28076	21	226	35.849123806810084	0.2505988732249739	69.57926668425218	225	0.8444444444444444	79.05007363770251	59	0.9661016949152542	67.51285347043702	166	0.8012048192771084	54.09836065573771	9	0.5555555555555556	methylated (>=50%)	Q8NE09	Regulator of G protein signaling 22 (RGS22)	regulation of signal transduction [GO:0009966]	hit with GO BP
GN012151	Chromosome_5A	699	1	30	46.63805436337625	0.8052995391705069	0.8119079837618404	30	0	0.8119079837618404	30	0	NA	NA	NA	0.34843205574912894	61	0	unmethylated (<10%)	Q6PJ21	SPRY domain-containing SOCS box protein 3 (SSB-3)	negative regulation of cGAS/STING signaling pathway [GO:0160049]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN012150	Chromosome_5A	12443	11	180	33.15920597926545	0.5271961208925713	84.05831550590285	179	0.88268156424581	85.18258426966293	22	0.9090909090909091	83.91533446458872	157	0.8789808917197452	3.2976827094474155	64	0	methylated (>=50%)	Q8K2Y9	Cerebral cavernous malformations protein 2 homolog (Malcavernin) (Osmosensing scaffold for MEKK3)	blood vessel development [GO:0001568]; blood vessel endothelial cell differentiation [GO:0060837]; cell-cell junction organization [GO:0045216]; endothelial cell development [GO:0001885]; endothelial tube morphogenesis [GO:0061154]; endothelium development [GO:0003158]; heart development [GO:0007507]; in utero embryonic development [GO:0001701]; inner ear development [GO:0048839]; multicellular organism growth [GO:0035264]; pericardium development [GO:0060039]; regulation of angiogenesis [GO:0045765]; vasculature development [GO:0001944]; vasculogenesis [GO:0001570]; venous blood vessel morphogenesis [GO:0048845]	hit with GO BP
GN012149	Chromosome_5A	17577	25	183	35.67161631677761	0.32859169471594757	74.55910283078593	181	0.8839779005524862	72.85089849441476	40	0.925	74.9499888864192	141	0.8723404255319149	69.9738903394256	27	0.8148148148148148	methylated (>=50%)	Q60HE9	Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B)	mannose metabolic process [GO:0006013]	hit with GO BP
GN012148	Chromosome_5A	18404	10	151	35.57378830688981	0.2610935472687625	75.86609121661029	151	0.8807947019867549	79.17121046892039	35	0.8571428571428571	74.96661225701142	116	0.8879310344827587	72.7104532839963	26	0.8846153846153846	methylated (>=50%)	Q8TBP0	TBC1 domain family member 16	regulation of receptor recycling [GO:0001919]	hit with GO BP
GN012147	Chromosome_5A	15432	18	160	37.35743908761016	0.2982747294457143	67.22182849043232	143	0.7902097902097902	80.54815378759041	44	0.9318181818181818	61.22623736941257	99	0.7272727272727273	62.295081967213115	8	0.625	methylated (>=50%)	Q4G0X9	Coiled-coil domain-containing protein 40	axonemal dynein complex assembly [GO:0070286]; axoneme assembly [GO:0035082]; cilium movement [GO:0003341]; cilium organization [GO:0044782]; determination of digestive tract left/right asymmetry [GO:0071907]; determination of liver left/right asymmetry [GO:0071910]; determination of pancreatic left/right asymmetry [GO:0035469]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; flagellated sperm motility [GO:0030317]; heart looping [GO:0001947]; inner dynein arm assembly [GO:0036159]; lung development [GO:0030324]; motile cilium assembly [GO:0044458]; protein localization to cilium [GO:0061512]; regulation of cilium beat frequency [GO:0003356]	hit with GO BP
GN012146	Chromosome_5A	7035	12	81	35.678749111584935	0.3626510210627606	93.13614811469857	81	0.9629629629629629	94.35233160621762	38	0.9736842105263158	92.1968787515006	43	0.9534883720930233	87.76844070961718	46	1	methylated (>=50%)	Q7T0L6	Cyclin-F	negative regulation of centrosome duplication [GO:0010826]; protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN012145	Chromosome_5A	3362	2	73	39.58953004164188	0.5550941569750347	90.42437431991294	68	1	96.33967789165446	30	1	88.47637415621986	38	1	92.79169211973121	25	1	methylated (>=50%)	P02552	Tubulin alpha-1A chain (EC 3.6.5.-) [Cleaved into: Detyrosinated tubulin alpha-1A chain]	microtubule-based process [GO:0007017]; mitotic cell cycle [GO:0000278]; neuron differentiation [GO:0030182]	hit with GO BP
GN012144	Chromosome_5A	4691	3	94	38.35003197612449	0.5457959426173707	2.814814814814815	79	0	2.2082018927444795	20	0	2.8776978417266186	59	0	0.7543103448275862	45	0	unmethylated (<10%)	P02552	Tubulin alpha-1A chain (EC 3.6.5.-) [Cleaved into: Detyrosinated tubulin alpha-1A chain]	microtubule-based process [GO:0007017]; mitotic cell cycle [GO:0000278]; neuron differentiation [GO:0030182]	hit with GO BP
GN012143	Chromosome_5A	19521	11	161	36.268633779007224	0.2515133989373617	80.32246675297164	160	0.9375	80.44009779951101	76	0.9473684210526315	80.23255813953489	84	0.9285714285714286	44.72049689440994	7	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012142	Chromosome_5A	18016	9	233	33.44249555950267	0.4627143582139435	71.85347000504117	182	0.7747252747252747	45.92391304347826	18	0.3333333333333333	73.56260075228371	164	0.823170731707317	89.55223880597015	25	0.96	methylated (>=50%)	O54983	Ketimine reductase mu-crystallin (EC 1.5.1.25) (1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase) (P2C/Pyr2C reductase) (EC 1.5.1.1) (NADP-regulated thyroid-hormone-binding protein)	amino acid catabolic process [GO:0009063]; L-lysine catabolic process [GO:0019477]; mitochondrial transport [GO:0006839]; negative regulation of transcription by RNA polymerase II [GO:0000122]; sensory perception of sound [GO:0007605]; thyroid hormone metabolic process [GO:0042403]; thyroid hormone transport [GO:0070327]	hit with GO BP
GN012141	Chromosome_5A	15717	8	151	35.29299484634472	0.3147647447973504	91.46331094294703	151	0.9867549668874173	92.74611398963731	11	1	91.39688785548202	140	0.9857142857142858	94.47818884594147	63	0.9841269841269841	methylated (>=50%)	Q68FJ0	Nuclear pore complex protein Nup85 (85 kDa nucleoporin) (Nucleoporin Nup85)	mRNA export from nucleus [GO:0006406]; nephron development [GO:0072006]; positive regulation of DNA-templated transcription [GO:0045893]; protein import into nucleus [GO:0006606]	hit with GO BP
GN012140	Chromosome_5A	861	1	27	40.41811846689895	0.7694624652455978	0.373134328358209	27	0	0.373134328358209	27	0	NA	NA	NA	0.5790190735694822	52	0	unmethylated (<10%)	A0A1W2PR82	Protein PERCC1 (Proline and glutamage-rich protein with a coiled coil domain)	digestive tract morphogenesis [GO:0048546]; enteroendocrine cell differentiation [GO:0035883]	hit with GO BP
GN012139	Chromosome_5A	877	1	11	46.40820980615735	0.23904747745068886	0.5681818181818182	3	0	0.5681818181818182	3	0	NA	NA	NA	0.8184523809523809	34	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012138	Chromosome_5A	188	1	8	51.59574468085106	0.6708296164139161	0.6956521739130435	8	0	0.6956521739130435	8	0	NA	NA	NA	0.7376185458377239	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012137	Chromosome_5A	2066	3	42	35.237173281703775	0.6570898489265836	0.5893019038984587	42	0	0.8141112618724559	15	0	0.4765146358066712	27	0	0.5491329479768786	78	0	unmethylated (<10%)	Q4V9Y5	Cysteine-rich secretory protein LCCL domain-containing 2	NA	hit, no GO BP
GN012136	Chromosome_5A	65619	17	724	34.770417104801965	0.3667486485799016	78.25694138386955	687	0.9039301310043668	82.33510235026536	43	0.9069767441860465	78.00524074680642	644	0.9037267080745341	0.40937848902121327	50	0	methylated (>=50%)	Q8R4C2	RUN and FYVE domain-containing protein 2 (Leucine zipper FYVE-finger protein) (LZ-FYVE)	NA	hit, no GO BP
GN012135	Chromosome_5A	35768	8	735	34.902706329680164	0.6749465166833443	1.4909508761850043	668	0	0.7363092498849517	51	0	1.5411955755737354	617	0	0.5678022712090849	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012160	Chromosome_5A	8627	5	91	35.6323171438507	0.3330897923664757	90.84944751381215	90	0.9888888888888889	97.88434414668548	9	1	89.86818807790675	81	0.9876543209876543	94.74393530997304	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012161	Chromosome_5A	234	1	2	47.863247863247864	0.15641711229946523	63.6986301369863	2	1	63.6986301369863	2	1	NA	NA	NA	92.40088105726872	31	0.967741935483871	NA	NA	NA	NA	no Swiss-Prot hit
GN012162	Chromosome_5A	3123	2	43	37.04771053474224	0.40142588108689803	77.69607843137256	32	0.9375	77.82608695652173	11	1	77.61780104712042	21	0.9047619047619048	84.8012470771629	23	0.9565217391304348	methylated (>=50%)	Q94B65	UDP-galactose/UDP-glucose transporter 7 (AtUTr7)	lateral root development [GO:0048527]; root hair cell development [GO:0080147]; UDP-galactose transmembrane transport [GO:0072334]; UDP-glucose transmembrane transport [GO:0015786]	hit with GO BP
GN012163	Chromosome_5A	12097	7	144	34.20682813920807	0.4075854400880513	83.98146054713995	144	0.9583333333333334	90.50144648023144	48	0.9583333333333334	81.9846426461902	96	0.9583333333333334	49.424736337488014	49	0.4489795918367347	methylated (>=50%)	D3Z3C6	AN1-type zinc finger protein 4 (AN1-type zinc finger and ubiquitin domain-containing protein-like 1)	NA	hit, no GO BP
GN012164	Chromosome_5A	20036	11	260	34.56777799960072	0.4348608228494096	77.3342425514058	259	0.8648648648648649	80.3305785123967	11	0.8181818181818182	77.236036621702155	248	0.8669354838709677	5.028512182477968	66	0	methylated (>=50%)	Q9LZG0	Adenosine kinase 2 (AK 2) (EC 2.7.1.20) (Adenosine 5'-phosphotransferase 2) (N6,N6-dimethyladenosine kinase 2) (EC 2.7.1.-) (N6-isopentenyladenosine kinase 2) (EC 2.7.1.-) (N6-methyladenosine kinase 2) (EC 2.7.1.-)	adenosine salvage [GO:0006169]; AMP salvage [GO:0044209]; purine nucleobase metabolic process [GO:0006144]; toxic metabolite repair [GO:0110052]	hit with GO BP
GN012165	Chromosome_5A	204	1	2	45.09803921568628	0.2833333333333333	86.66666666666667	2	1	86.66666666666667	2	1	NA	NA	NA	90.33550325488233	23	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012166	Chromosome_5A	24256	10	193	29.052605540897098	0.38161955626103145	70.9058581321355	172	0.8081395348837209	64	10	0.8	71.35312873654843	162	0.808641975308642	0.5349794238683128	53	0	methylated (>=50%)	A7RUD5	Cytosolic Fe-S cluster assembly factor NUBP1 homolog	iron-sulfur cluster assembly [GO:0016226]	hit with GO BP
GN012174	Chromosome_5A	3981	3	66	34.33810600351671	0.5624422029660582	75.946173254836	66	0.696969696969697	79.24865831842575	13	0.6153846153846154	75.50631403383369	53	0.71698113207547165	0.2621231979030144	36	0	methylated (>=50%)	Q63042	FAD-linked sulfhydryl oxidase ALR (EC 1.8.3.2) (Augmenter of liver regeneration)	cellular response to actinomycin D [GO:0072717]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to toxic substance [GO:0097237]; cellular response to tumor necrosis factor [GO:0071356]; liver development [GO:0001889]; liver regeneration [GO:0097421]; negative regulation of apoptotic process [GO:0043066]; negative regulation of natural killer cell mediated cytotoxicity [GO:0045953]; positive regulation of DNA biosynthetic process [GO:2000573]; protein import into the intermembrane space via the disulfide relay system [GO:0160203]; response to lipopolysaccharide [GO:0032496]	hit with GO BP
GN012173	Chromosome_5A	3148	2	76	34.27573062261754	0.822429392514369	0.6310807257428346	75	0	0.6594724220623501	49	0	0.6088992974238876	26	0	2.1715526601520088	40	0	unmethylated (<10%)	Q18248	Doublesex- and mab-3-related transcription factor dmd-4	regulation of transcription by RNA polymerase II [GO:0006357]; sex differentiation [GO:0007548]; synapse pruning [GO:0098883]	hit with GO BP
GN012172	Chromosome_5A	29278	19	339	36.54279663911469	0.3477109441672167	91.97217314487632	305	0.9836065573770492	94.38742083424329	91	1	91.15495455553092	214	0.9766355140186916	24.62624584717608	36	0.2222222222222222	methylated (>=50%)	Q8WYB5	Histone acetyltransferase KAT6B (EC 2.3.1.48) (Histone acetyltransferase MOZ2) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (MYST-4) (Monocytic leukemia zinc finger protein-related factor)	negative regulation of DNA-templated transcription [GO:0045892]; nucleosome assembly [GO:0006334]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of developmental process [GO:0050793]; regulation of DNA-templated transcription [GO:0006355]; regulation of hemopoiesis [GO:1903706]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN012171	Chromosome_5A	432	1	19	51.388888888888886	0.6769484536082474	0.45871559633027525	19	0	0.45871559633027525	19	0	NA	NA	NA	0.49945060433523125	131	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012170	Chromosome_5A	16111	11	209	36.174042579604	0.39672204659246857	83.51908396946565	205	0.9024390243902439	71.42857142857143	14	0.8571428571428571	84.1441875401413	191	0.9057591623036649	1.2309920347574221	45	0	methylated (>=50%)	Q8BX80	Cytosolic endo-beta-N-acetylglucosaminidase (ENGase) (EC 3.2.1.96)	protein deglycosylation [GO:0006517]	hit with GO BP
GN012169	Chromosome_5A	1410	1	18	46.52482269503546	0.3375718237922962	2.5	18	0	2.5	18	0	NA	NA	NA	1.7865538316878233	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012168	Chromosome_5A	14660	7	345	34.529331514324696	0.7929000353675085	0.8322120895001744	345	0	1.287391139719803	55	0	0.7632273614139791	290	0	0.7065217391304348	35	0	unmethylated (<10%)	Q9PTS8	Neuronal acetylcholine receptor subunit alpha-9 (Nicotinic acetylcholine receptor subunit alpha-9) (NACHR alpha-9)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020025	Chromosome_5A	1713	5	33	40.22183304144775	0.47740862103911896	7.174887892376682	22	0	7.0366699702675914	20	0	8.49056603773585	2	0	2.067464635473341	41	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN012167	Chromosome_5A	17971	10	428	33.79889822491792	0.8343179470513817	1.470472904085954	426	0	0.5166051660516605	75	0	1.651350468815599	351	0	0.4226840436773512	53	0	unmethylated (<10%)	Q15822	Neuronal acetylcholine receptor subunit alpha-2 (Nicotinic acetylcholine receptor subunit alpha-2)	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; cellular response to nicotine [GO:0071316]; membrane depolarization [GO:0051899]; modulation of inhibitory postsynaptic potential [GO:0098828]; monoatomic ion transmembrane transport [GO:0034220]; monoatomic ion transport [GO:0006811]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012175	Chromosome_5A	438	1	1	40.182648401826484	0.06152549515381374	3.125	1	0	3.125	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN012176	Chromosome_5A	453	1	7	48.12362030905077	0.2782311134509081	60.51502145922747	7	0.7142857142857143	60.51502145922747	7	0.7142857142857143	NA	NA	NA	71.04642014162077	40	0.825	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012184	Chromosome_5A	906	1	6	38.30022075055188	0.19392123287671234	72.83582089552239	6	0.8333333333333334	72.83582089552239	6	0.8333333333333334	NA	NA	NA	69.12972085385879	13	0.8461538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012183	Chromosome_5A	12313	10	349	38.593356614959795	0.7612445671092105	0.7063018583281904	331	0	0.8486238532110092	104	0	0.6456030519417001	227	0	0.6161652772743748	43	0	unmethylated (<10%)	Q9NR12	PDZ and LIM domain protein 7 (LIM mineralization protein) (LMP) (Protein enigma)	actin cytoskeleton organization [GO:0030036]; heart development [GO:0007507]; muscle structure development [GO:0061061]; receptor-mediated endocytosis [GO:0006898]	hit with GO BP
GN012182	Chromosome_5A	804	1	13	43.159203980099505	0.35001004621257786	91.04258443465491	13	0.9230769230769231	91.04258443465491	13	0.9230769230769231	NA	NA	NA	90.94650205761317	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012181	Chromosome_5A	2650	3	20	34.943396226415096	0.24729376633072042	74.0084388185654	20	0.8	37.096774193548384	5	0.4	80.88088088088088	15	0.9333333333333333	50.04035512510089	40	0.425	methylated (>=50%)	Q99J99	3-mercaptopyruvate sulfurtransferase (MST) (EC 2.8.1.2)	hydrogen sulfide biosynthetic process [GO:0070814]; kidney development [GO:0001822]; liver development [GO:0001889]; spinal cord development [GO:0021510]; transsulfuration [GO:0019346]; tRNA wobble position uridine thiolation [GO:0002143]	hit with GO BP
GN011483	Chromosome_5A	1720	4	36	36.86046511627907	0.6164874551971327	90.71058475203553	36	1	91.22609673790777	23	1	89.71861471861472	13	1	91.78959087113833	54	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012180	Chromosome_5A	6193	2	179	37.13870498950428	0.8384743967929809	0.5407791634477431	179	0	0.7769145394006659	32	0	0.5147058823529411	147	0	0.3396409509946628	44	0	unmethylated (<10%)	Q8VHW4	Voltage-dependent calcium channel gamma-5 subunit (Neuronal voltage-gated calcium channel gamma-5 subunit) (Transmembrane AMPAR regulatory protein gamma-5) (TARP gamma-5)	positive regulation of synaptic transmission, glutamatergic [GO:0051968]; postsynaptic neurotransmitter receptor diffusion trapping [GO:0098970]; regulation of AMPA receptor activity [GO:2000311]; transmission of nerve impulse [GO:0019226]	hit with GO BP
GN003599	Chromosome_5A	461	1	5	38.82863340563991	0.31106612685560053	0.5988023952095808	5	0	0.5988023952095808	5	0	NA	NA	NA	0.4043905257076834	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012179	Chromosome_5A	28844	15	870	38.451671058105674	0.816130465978823	1.6970601596469597	797	0.006273525721455458	1.0281797410510283	71	0	1.7593643586833143	726	0.006887052341597796	0.26490066225165565	46	0	unmethylated (<10%)	O70247	Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6)	biotin import across plasma membrane [GO:1905135]; biotin metabolic process [GO:0006768]; biotin transport [GO:0015878]; iodide transmembrane transport [GO:1904200]; pantothenate transmembrane transport [GO:0015887]; sodium ion transport [GO:0006814]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN012178	Chromosome_5A	411	1	12	41.84914841849148	0.671294405879951	0.8264462809917356	12	0	0.8264462809917356	12	0	NA	NA	NA	1.3051305130513051	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012177	Chromosome_5A	21485	17	180	35.52245752850826	0.2661243756591951	41.75717819120336	179	0.41899441340782123	58.112937812723374	78	0.7307692307692307	34.71773573296416	101	0.1782178217821782	9.573361082206036	13	0	sparse (10-50%)	Q6IE24	Ubiquitin carboxyl-terminal hydrolase 54 (EC 3.4.19.12) (Ubiquitin-specific peptidase 54)	protein deubiquitination [GO:0016579]	hit with GO BP
GN012189	Chromosome_5A	34833	13	362	34.45870295409525	0.35436933448841473	76.96924525341284	359	0.9331476323119777	88.21502412129566	32	0.96875	76.29050372280687	327	0.9296636085626911	79.39189189189189	9	0.7777777777777778	methylated (>=50%)	Q9V3L1	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase) (Protein sulfateless) [Includes: Heparan sulfate N-deacetylase (EC 3.-.-.-); Heparan sulfate N-sulfotransferase (EC 2.8.2.-)]	epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; heparin proteoglycan biosynthetic process [GO:0030210]; imaginal disc-derived wing margin morphogenesis [GO:0008587]; imaginal disc-derived wing vein specification [GO:0007474]; mesoderm migration involved in gastrulation [GO:0007509]; regulation of imaginal disc growth [GO:0045570]; segment polarity determination [GO:0007367]; spermatogenesis [GO:0007283]; sulfur compound metabolic process [GO:0006790]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN012188	Chromosome_5A	26338	12	369	34.3647961120814	0.47541265080927636	87.91182631879641	332	0.927710843373494	95.50387596899225	36	1	87.14143374062614	296	0.918918918918919	95.67147613762486	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020780	Chromosome_5A	380	1	9	42.89473684210526	0.5397727272727273	0.5494505494505495	9	0	0.5494505494505495	9	0	NA	NA	NA	0.7511737089201878	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012190	Chromosome_5A	2418	2	32	33.45740281224152	0.4730220445292154	0.34467901766479964	31	0	0.30895983522142123	18	0	0.37037037037037035	13	0	0.79628400796284	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012191	Chromosome_5A	17366	10	492	38.27594149487504	0.7740975235067626	2.9180445079989275	491	0	5.400507430228344	49	0	2.5689382741220244	442	0	0.45662100456621	54	0	unmethylated (<10%)	A8DZE7	Short-chain dehydrogenase/reductase family 42E member 1 (EC 1.1.1.-)	steroid biosynthetic process [GO:0006694]	hit with GO BP
GN012192	Chromosome_5A	1410	1	34	38.08510638297872	0.6736741519350214	65.27682843472317	34	1	65.27682843472317	34	1	NA	NA	NA	64.87388724035608	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012193	Chromosome_5A	864	1	26	41.08796296296296	0.72171175223286	0.46904315196998125	26	0	0.46904315196998125	26	0	NA	NA	NA	0.5398110661268556	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012194	Chromosome_5A	1119	1	23	53.88739946380697	0.3111640390753458	2.0408163265306123	3	0	2.0408163265306123	3	0	NA	NA	NA	0.6282722513089005	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012195	Chromosome_5A	2917	3	28	35.927322591703806	0.2976454682278513	85.31810766721044	28	0.9285714285714286	90.3225806451613	4	1	84.42307692307692	24	0.9166666666666666	91.37807499402913	63	0.9523809523809523	methylated (>=50%)	P12004	DNA sliding clamp PCNA (Cyclin) (Proliferating cell nuclear antigen) (PCNA)	cellular response to hydrogen peroxide [GO:0070301]; cellular response to UV [GO:0034644]; chromatin organization [GO:0006325]; DNA repair-dependent chromatin remodeling [GO:0140861]; epithelial cell differentiation [GO:0030855]; estrous cycle [GO:0044849]; heart development [GO:0007507]; leading strand elongation [GO:0006272]; liver regeneration [GO:0097421]; mismatch repair [GO:0006298]; mitotic DNA replication [GO:1902969]; mitotic telomere maintenance via semi-conservative replication [GO:1902990]; positive regulation of DNA repair [GO:0045739]; positive regulation of DNA replication [GO:0045740]; replication fork processing [GO:0031297]; response to cadmium ion [GO:0046686]; response to dexamethasone [GO:0071548]; response to estradiol [GO:0032355]; response to L-glutamate [GO:1902065]; translesion synthesis [GO:0019985]	hit with GO BP
GN012196	Chromosome_5A	4566	3	124	37.779237844940866	0.7642604336240899	86.66300768386388	123	0.8861788617886179	32.8125	5	0.4	88.12006764374296	118	0.9067796610169492	59.42587832047986	36	0.6388888888888888	methylated (>=50%)	P17070	DNA sliding clamp PCNA (Cyclin) (Proliferating cell nuclear antigen) (OsPCNA) (PCNA)	DNA repair-dependent chromatin remodeling [GO:0140861]; leading strand elongation [GO:0006272]; mismatch repair [GO:0006298]; mitotic DNA replication [GO:1902969]; protein homotrimerization [GO:0070207]; regulation of DNA replication [GO:0006275]	hit with GO BP
GN012198	Chromosome_5A	12687	4	229	36.88815322771341	0.5322119107324309	92.90123456790124	220	0.9863636363636363	94.84638255698711	15	1	92.74134419551935	205	0.9853658536585366	37.21793773207655	55	0.32727272727272727	methylated (>=50%)	A6QLG5	Small ribosomal subunit protein uS4 (40S ribosomal protein S9)	ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	hit with GO BP
GN012204	Chromosome_5A	264	1	7	50.378787878787875	0.41809954751131223	7.8125	5	0	7.8125	5	0	NA	NA	NA	36.260709914320685	42	0.11904761904761904	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012202	Chromosome_5A	37212	7	446	35.343437600773946	0.38468445855782846	74.68834293212802	438	0.8036529680365296	59.682539682539684	43	0.627906976744186	75.60230480683708	395	0.8227848101265823	41.31832797427653	10	0.5	methylated (>=50%)	Q60674	Nuclear receptor subfamily 1 group D member 2 (Orphan nuclear receptor RVR) (Rev-erb-beta)	cell differentiation [GO:0030154]; circadian behavior [GO:0048512]; energy homeostasis [GO:0097009]; hormone-mediated signaling pathway [GO:0009755]; intracellular receptor signaling pathway [GO:0030522]; lipid homeostasis [GO:0055088]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of inflammatory response [GO:0050728]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of inflammatory response [GO:0050727]; regulation of lipid metabolic process [GO:0019216]; regulation of skeletal muscle cell differentiation [GO:2001014]	hit with GO BP
GN012201	Chromosome_5A	57770	12	761	34.13190237147308	0.45332912482042326	78.57370554214673	695	0.9079136690647482	71.8865598027127	15	0.7333333333333333	78.69951515995082	680	0.9117647058823529	48.760330578512395	18	0.6111111111111112	methylated (>=50%)	Q5RD58	FERRY endosomal RAB5 effector complex subunit 3	regulation of mast cell degranulation [GO:0043304]	hit with GO BP
GN012200	Chromosome_5A	24233	6	350	35.53006231172368	0.45869550180364727	88.59001989389921	348	0.9741379310344828	78.92857142857143	6	0.8333333333333334	88.70345521637034	342	0.9766081871345029	94.04494382022472	15	1	methylated (>=50%)	Q9CQC9	Small COPII coat GTPase SAR1B (EC 3.6.5.2)	cellular response to leucine starvation [GO:1990253]; COPII vesicle coating [GO:0048208]; COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; lipid export from cell [GO:0140353]; lipid homeostasis [GO:0055088]; lipoprotein transport [GO:0042953]; membrane organization [GO:0061024]; negative regulation of TORC1 signaling [GO:1904262]; regulation of COPII vesicle coating [GO:0003400]; regulation of lipid transport [GO:0032368]; regulation of TORC1 signaling [GO:1903432]; vesicle organization [GO:0016050]	hit with GO BP
GN012206	Chromosome_5A	975	2	19	38.256410256410255	0.5482391240011838	2.320185614849188	19	0	2.4038461538461537	18	0	0	1	0	87.05092775365179	43	0.7906976744186046	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012207	Chromosome_5A	1536	4	17	32.682291666666664	0.4200772200772201	3.1490015360983103	17	0	1.2422360248447204	14	0	8.630952380952381	3	0	2.318840579710145	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012208	Chromosome_5A	3418	6	56	34.78642480983031	0.5424935521355894	1.3840830449826989	56	0	1.164079822616408	26	0	1.6225961538461537	30	0	0.6083650190114068	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005902	Chromosome_5A	624	1	23	43.75	0.7711154094132817	NA	0	NA	NA	NA	NA	NA	NA	NA	70	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012205	Chromosome_5A	264	1	4	46.96969696969697	0.3333333333333333	94.28571428571429	4	1	94.28571428571429	4	1	NA	NA	NA	83.09582309582309	21	1	NA	Q86YT6	E3 ubiquitin-protein ligase MIB1 (EC 2.3.2.27) (DAPK-interacting protein 1) (DIP-1) (Mind bomb homolog 1) (RING-type E3 ubiquitin transferase MIB1) (Zinc finger ZZ type with ankyrin repeat domain protein 2)	endocytosis [GO:0006897]; Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012209	Chromosome_5A	33058	9	450	35.440740516667674	0.43372147198410205	88.16886438369815	445	0.952808988764045	81.5519765739385	14	0.9285714285714286	88.32245785753126	431	0.9535962877030162	93.0379746835443	25	1	methylated (>=50%)	Q80SY4	E3 ubiquitin-protein ligase MIB1 (EC 2.3.2.27) (DAPK-interacting protein 1) (DIP-1) (Mind bomb homolog 1) (RING-type E3 ubiquitin transferase MIB1)	blood vessel development [GO:0001568]; endocytosis [GO:0006897]; heart development [GO:0007507]; heart looping [GO:0001947]; in utero embryonic development [GO:0001701]; negative regulation of neuron differentiation [GO:0045665]; neural tube formation [GO:0001841]; Notch signaling pathway [GO:0007219]; positive regulation of endocytosis [GO:0045807]; protein ubiquitination [GO:0016567]; somitogenesis [GO:0001756]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012210	Chromosome_5A	231	1	9	45.45454545454545	0.7798199549887472	1.2413793103448276	9	0	1.2413793103448276	9	0	NA	NA	NA	4.643449419568823	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012212	Chromosome_5A	495	1	7	53.535353535353536	0.20220588235294118	79.54545454545455	7	1	79.54545454545455	7	1	NA	NA	NA	89.51869044710482	53	0.9245283018867925	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012213	Chromosome_5A	453	1	20	49.22737306843267	0.7723785166240409	8.743169398907105	19	0	8.743169398907105	19	0	NA	NA	NA	15.713196033562166	114	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012214	Chromosome_5A	300	1	14	45.666666666666664	0.9032258064516129	1.7667844522968197	14	0	1.7667844522968197	14	0	NA	NA	NA	0.4583333333333333	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012215	Chromosome_5A	2274	4	63	37.159190853122254	0.8137297223610669	0.5055147058823529	63	0	0.4896626768226333	52	0	0.591715976331361	11	0	0.6329113924050633	20	0	unmethylated (<10%)	O35245	Polycystin-2 (Polycystic kidney disease 2 protein homolog) (Transient receptor potential cation channel subfamily P member 2)	aorta development [GO:0035904]; branching involved in ureteric bud morphogenesis [GO:0001658]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cell surface receptor signaling pathway via JAK-STAT [GO:0007259]; cellular response to calcium ion [GO:0071277]; cellular response to cAMP [GO:0071320]; cellular response to fluid shear stress [GO:0071498]; cellular response to hydrostatic pressure [GO:0071464]; cellular response to osmotic stress [GO:0071470]; cilium organization [GO:0044782]; detection of mechanical stimulus [GO:0050982]; detection of nodal flow [GO:0003127]; determination of left/right symmetry [GO:0007368]; determination of liver left/right asymmetry [GO:0071910]; embryonic placenta development [GO:0001892]; heart development [GO:0007507]; heart looping [GO:0001947]; intracellular calcium ion homeostasis [GO:0006874]; kidney development [GO:0001822]; liver development [GO:0001889]; mesonephric duct development [GO:0072177]; metanephric ascending thin limb development [GO:0072218]; metanephric cortex development [GO:0072214]; metanephric cortical collecting duct development [GO:0072219]; metanephric distal tubule development [GO:0072235]; metanephric mesenchyme development [GO:0072075]; metanephric part of ureteric bud development [GO:0035502]; metanephric S-shaped body morphogenesis [GO:0072284]; metanephric smooth muscle tissue development [GO:0072208]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; negative regulation of ryanodine-sensitive calcium-release channel activity [GO:0060315]; neural tube development [GO:0021915]; placenta blood vessel development [GO:0060674]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of gene expression [GO:0010628]; positive regulation of nitric oxide biosynthetic process [GO:0045429]; positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway [GO:1900738]; positive regulation of transcription by RNA polymerase II [GO:0045944]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein heterotetramerization [GO:0051290]; protein homotetramerization [GO:0051289]; protein tetramerization [GO:0051262]; regulation of calcium ion import [GO:0090279]; regulation of cell cycle [GO:0051726]; regulation of cell population proliferation [GO:0042127]; release of sequestered calcium ion into cytosol [GO:0051209]; renal artery morphogenesis [GO:0061441]; renal tubule morphogenesis [GO:0061333]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; spinal cord development [GO:0021510]; transmembrane transport [GO:0055085]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN012216	Chromosome_5A	898	3	24	38.084632516703785	0.7390946502057614	0.16051364365971107	24	0	0	19	0	0.6688963210702341	5	0	1.5037593984962405	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012217	Chromosome_5A	33512	9	861	35.95726903795655	0.7948893392388109	1.4638630899061809	857	0	0.5705229793977813	60	0	1.5356406142562458	797	0	1.068566340160285	53	0	unmethylated (<10%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN012218	Chromosome_5A	264	1	4	49.24242424242424	0.25287356321839083	2.2900763358778624	4	0	2.2900763358778624	4	0	NA	NA	NA	0.711864406779661	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003605	Chromosome_5A	289	1	5	40.484429065743946	0.43134328358208956	0.819672131147541	5	0	0.819672131147541	5	0	NA	NA	NA	3.5387578237843043	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012219	Chromosome_5A	291	1	7	42.61168384879725	0.5367588932806324	0.5361930294906166	7	0	0.5361930294906166	7	0	NA	NA	NA	3.6224741251848203	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012221	Chromosome_5A	447	1	8	49.21700223713646	0.2997234096052301	0.7142857142857143	8	0	0.7142857142857143	8	0	NA	NA	NA	1.08153078202995	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018482	Chromosome_5A	361	1	4	47.36842105263158	0.20424328147100423	1.2820512820512822	4	0	1.2820512820512822	4	0	NA	NA	NA	1.3613861386138615	34	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004965	Chromosome_5A	273	1	9	40.65934065934066	0.9719145569620253	0.6791171477079796	9	0	0.6791171477079796	9	0	NA	NA	NA	1.174875734297334	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002644	Chromosome_5A	889	2	18	54.780652418447694	0.294576782887228	74.64788732394366	16	0.875	74.17417417417417	15	0.8666666666666667	81.81818181818181	1	1	88.40361445783132	51	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001624	Chromosome_5A	1592	2	29	39.00753768844221	0.4818703684375326	0.5272407732864675	29	0	0.46893317702227433	20	0	0.7017543859649122	9	0	0.21119324181626187	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001887	Chromosome_5A	267	1	3	48.68913857677903	0.19329150579150578	NA	0	NA	NA	NA	NA	NA	NA	NA	5.176362803481448	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012247	Chromosome_5A	2090	2	58	39.04306220095694	0.733919403274242	5.953770721456923	56	0	6.119889641334336	48	0	3.7162162162162162	8	0	2.1398002853067046	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012246	Chromosome_5A	1436	2	40	41.155988857938716	0.6589876554540866	0.5535055350553506	40	0	0.5535055350553506	40	0	NA	NA	NA	0.6283068783068783	43	0	unmethylated (<10%)	Q9PTS8	Neuronal acetylcholine receptor subunit alpha-9 (Nicotinic acetylcholine receptor subunit alpha-9) (NACHR alpha-9)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012245	Chromosome_5A	1330	2	32	40.82706766917293	0.577397910731244	0.5110732538330494	32	0	0.547945205479452	30	0	0	2	0	2.2222222222222223	66	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012244	Chromosome_5A	1059	1	42	43.814919735599624	0.8269130661114004	0.6144393241167435	42	0	0.6144393241167435	42	0	NA	NA	NA	0.5189750243269543	55	0	unmethylated (<10%)	Q8JFN7	Neuronal acetylcholine receptor subunit alpha-9-I (Nicotinic acetylcholine receptor subunit alpha-9-I) (NACHR alpha-9-I)	NA	hit, no GO BP
GN012243	Chromosome_5A	1380	1	50	42.608695652173914	0.7992031134173462	1.0130246020260492	50	0	1.0130246020260492	50	0	NA	NA	NA	0.6493506493506493	50	0	unmethylated (<10%)	P43679	Neuronal acetylcholine receptor subunit beta-3	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012242	Chromosome_5A	1242	1	43	42.99516908212561	0.7525681674064679	0.5673758865248227	43	0	0.5673758865248227	43	0	NA	NA	NA	0.6870229007633588	64	0	unmethylated (<10%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012241	Chromosome_5A	1299	1	55	42.87913779830639	0.9213716437543524	0.6134969325153374	55	0	0.6134969325153374	55	0	NA	NA	NA	0.7230430682175416	77	0	unmethylated (<10%)	P19370	Neuronal acetylcholine receptor subunit beta-2 (GF-beta-2)	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; cognition [GO:0050890]; memory [GO:0007613]; nervous system process [GO:0050877]; response to hypoxia [GO:0001666]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]; visual learning [GO:0008542]	hit with GO BP
GN012240	Chromosome_5A	507	1	14	46.942800788954635	0.5116782006920415	0.26881720430107525	14	0	0.26881720430107525	14	0	NA	NA	NA	0.4346476249611922	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012239	Chromosome_5A	1077	1	30	40.11142061281337	0.6926490449546595	0.46296296296296297	30	0	0.46296296296296297	30	0	NA	NA	NA	0.455005055611729	30	0	unmethylated (<10%)	P48181	Acetylcholine receptor subunit beta-type unc-29 (Uncoordinated protein 29)	calcium ion transport [GO:0006816]; locomotion [GO:0040011]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; positive regulation of acetylcholine secretion, neurotransmission [GO:0014057]; positive regulation of locomotion involved in locomotory behavior [GO:0090326]; regulation of egg-laying behavior [GO:0046662]; regulation of membrane potential [GO:0042391]; regulation of muscle contraction [GO:0006937]; regulation of nematode pharyngeal pumping [GO:0043051]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012238	Chromosome_5A	234	1	16	53.84615384615385	0.9435483870967742	1.2269938650306749	14	0	1.2269938650306749	14	0	NA	NA	NA	0.4426737494466578	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012237	Chromosome_5A	3324	5	51	34.65703971119134	0.5130762968096922	10.535117056856187	41	0	9.484536082474227	12	0	10.8023072889355	29	0	1.5292801193584484	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012236	Chromosome_5A	673	2	23	38.48439821693908	0.9233476497256025	0.4608294930875576	8	0	0.4608294930875576	8	0	NA	NA	NA	0.7170946102243813	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012235	Chromosome_5A	1356	1	46	41.445427728613566	0.7925290642271774	0.6725297465080187	46	0	0.6725297465080187	46	0	NA	NA	NA	0.8311564948943244	46	0	unmethylated (<10%)	O76554	Acetylcholine receptor subunit alpha-type des-2	calcium ion transport [GO:0006816]; excitatory postsynaptic potential [GO:0060079]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012234	Chromosome_5A	657	1	32	42.16133942161339	1.0967136150234742	0.6124234470691163	32	0	0.6124234470691163	32	0	NA	NA	NA	0.510986203372509	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012233	Chromosome_5A	279	1	6	41.935483870967744	0.4909090909090909	0	6	0	0	6	0	NA	NA	NA	0.9695290858725761	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012232	Chromosome_5A	567	1	31	46.03174603174603	1.0322410147991543	1.1864406779661016	30	0	1.1864406779661016	30	0	NA	NA	NA	1.4306151645207439	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012231	Chromosome_5A	498	1	27	51.80722891566265	0.8080528846153846	0	15	0	0	15	0	NA	NA	NA	1.1795543905635648	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012230	Chromosome_5A	462	1	29	47.61904761904762	1.1095652173913044	0.3766478342749529	29	0	0.3766478342749529	29	0	NA	NA	NA	0.957592339261286	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012229	Chromosome_5A	699	1	18	42.918454935622314	0.5628019323671497	0.8746355685131195	18	0	0.8746355685131195	18	0	NA	NA	NA	0.5385996409335727	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012228	Chromosome_5A	336	1	13	47.32142857142857	0.6911392405063291	2.6666666666666665	13	0	2.6666666666666665	13	0	NA	NA	NA	7.3477956613016095	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012227	Chromosome_5A	654	1	26	49.84709480122324	0.6447503128199294	25.631067961165048	26	0	25.631067961165048	26	0	NA	NA	NA	11.672278338945006	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012226	Chromosome_5A	2108	6	113	43.311195445920305	1.154525450509398	0.4181913225300575	113	0	0.45841519318926	92	0	0.25906735751295334	21	0	2.2811760729976345	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012225	Chromosome_5A	579	1	17	41.623488773747845	0.6788275862068965	1.2987012987012987	17	0	1.2987012987012987	17	0	NA	NA	NA	0.47104461069548353	110	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN012248	Chromosome_5A	465	1	13	44.516129032258064	0.6038961038961039	0.8818342151675485	13	0	0.8818342151675485	13	0	NA	NA	NA	0.8712121212121212	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012249	Chromosome_5A	493	2	12	39.553752535496955	0.6227368421052631	94.28571428571429	9	1	93.4959349593496	8	1	100	1	1	67.12871287128714	50	0.76	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN006074	Chromosome_5A	2222	2	23	33.798379837983795	0.36572205524545587	44.306005482182904	23	0.391304347826087	47.446393762183234	16	0.4375	38.74309392265194	7	0.2857142857142857	31.734038534189647	33	0.15151515151515152	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001111	Chromosome_5A	3845	5	23	33.47204161248374	0.21407649479544905	49.46270543615676	23	0.4782608695652174	47.347347347347345	12	0.5	50.43879907621247	11	0.45454545454545453	26.024734982332156	37	0.05405405405405406	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012250	Chromosome_5A	1161	1	52	44.530577088716626	0.9208382904731399	0.5184331797235023	52	0	0.5184331797235023	52	0	NA	NA	NA	0.46122801960219084	57	0	unmethylated (<10%)	Q9DEN4	Forkhead box protein D3-A (FoxD3-A) (FoxD3a) (Fork head domain-related protein 6) (FKH-6) (Forkhead protein 6) (xFD-6) (xFKH6)	anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; mesoderm formation [GO:0001707]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of neurogenesis [GO:0050768]; neural crest cell fate commitment [GO:0014034]; positive regulation of neurogenesis [GO:0050769]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN012251	Chromosome_5A	441	1	14	47.84580498866213	0.5557155715571557	0	3	0	0	3	0	NA	NA	NA	0.6666666666666666	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012252	Chromosome_5A	663	1	15	40.42232277526395	0.5722094361334867	87.24100327153762	15	1	87.24100327153762	15	1	NA	NA	NA	78.14251401120897	22	0.8636363636363636	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012255	Chromosome_5A	660	1	12	37.27272727272727	0.523532522474881	0.41841004184100417	12	0	0.41841004184100417	12	0	NA	NA	NA	2.259636685866194	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012256	Chromosome_5A	1386	1	33	38.74458874458875	0.6470588235294118	13.387978142076502	29	0	13.387978142076502	29	0	NA	NA	NA	1.027557216254087	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012257	Chromosome_5A	25900	7	383	36.37837837837838	0.4472786778331001	74.29605792437651	380	0.9105263157894737	81.5668202764977	11	1	74.10054112107068	369	0.907859078590786	88.74824191279887	43	1	methylated (>=50%)	A0A2R8Q3S9	Chloride channel CLIC-like protein 1	endoplasmic reticulum calcium ion homeostasis [GO:0032469]; retina development in camera-type eye [GO:0060041]	hit with GO BP
GN012258	Chromosome_5A	15638	5	406	37.798951272541245	0.7278499688753512	4.017728659414034	392	0	4.969809568044589	44	0	3.883048620236531	348	0	17.290249433106577	39	0	unmethylated (<10%)	F1NV61	Caspase-7 (CASP-7) (EC 3.4.22.60) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	apoptotic process [GO:0006915]; defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; lymphocyte apoptotic process [GO:0070227]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; proteolysis [GO:0006508]	hit with GO BP
GN012259	Chromosome_5A	475	2	9	41.26315789473684	0.44680183946488294	0	9	0	0	7	0	0	2	0	0.7198228128460686	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012260	Chromosome_5A	990	1	21	38.98989898989899	0.5641944150451844	0.7177033492822966	21	0	0.7177033492822966	21	0	NA	NA	NA	20.01787310098302	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012261	Chromosome_5A	466	2	12	36.90987124463519	0.7570055502910519	0.47095761381475665	12	0	0.47095761381475665	12	0	NA	NA	NA	2.9830038154699965	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012262	Chromosome_5A	1108	3	28	40.16245487364621	0.6315189512681676	0.6499535747446611	28	0	0.39893617021276595	19	0	1.2307692307692308	9	0	6.714674970805761	79	0	unmethylated (<10%)	Q6DF62	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)	intracellular calcium ion homeostasis [GO:0006874]; L-ascorbic acid biosynthetic process [GO:0019853]; positive regulation of ATP-dependent activity [GO:0032781]; regulation of calcium-mediated signaling [GO:0050848]	hit with GO BP
GN012263	Chromosome_5A	384	1	12	41.40625	0.7314285714285714	0.6153846153846154	12	0	0.6153846153846154	12	0	NA	NA	NA	2.0462633451957295	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012264	Chromosome_5A	13525	5	179	38.587800369685766	0.35953703744956256	1.5750463248919087	174	0.005747126436781609	1.5756302521008403	26	0	1.5749828806208628	148	0.006756756756756757	1.0033444816053512	58	0	unmethylated (<10%)	Q6TLF6	Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17)	intracellular calcium ion homeostasis [GO:0006874]; L-ascorbic acid biosynthetic process [GO:0019853]; positive regulation of ATP-dependent activity [GO:0032781]; regulation of calcium-mediated signaling [GO:0050848]	hit with GO BP
GN012265	Chromosome_5A	213	1	8	47.88732394366197	0.664327485380117	0	8	0	0	8	0	NA	NA	NA	1.911589008363202	50	0	unmethylated (<10%)	O60262	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]	hit with GO BP
GN018714	Chromosome_5A	667	3	5	32.8335832083958	0.28725236864771747	75.87412587412588	5	0.8	74.21052631578948	4	0.75	79.16666666666667	1	1	79.7228637413395	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012266	Chromosome_5A	22279	5	303	35.347187934826515	0.43697191290308424	88.44672657252889	303	0.9636963696369637	95.58614143331751	47	1	87.58060801473975	256	0.95703125	94.61279461279462	63	1	methylated (>=50%)	Q95LI3	Zinc finger Y-chromosomal protein	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN012267	Chromosome_5A	1936	2	58	42.97520661157025	0.6612683811621429	96.00443951165371	58	1	96.00443951165371	58	1	NA	NA	NA	88.54166666666667	23	1	methylated (>=50%)	Q55GU0	Probable serine/threonine-protein kinase DDB_G0267514 (EC 2.7.11.1)	NA	hit, no GO BP
GN012268	Chromosome_5A	585	1	26	45.2991452991453	0.8666666666666667	9.512195121951219	20	0	9.512195121951219	20	0	NA	NA	NA	0.5693581780538303	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012269	Chromosome_5A	15691	6	383	36.065260340322475	0.7507985659793902	0.9700297414779226	383	0	0.6890215893431327	43	0	1.0011179997967272	340	0	0.529567519858782	64	0	unmethylated (<10%)	Q93098	Protein Wnt-8b	canonical Wnt signaling pathway [GO:0060070]; cell fate commitment [GO:0045165]; cellular response to retinoic acid [GO:0071300]; determination of dorsal identity [GO:0048263]; gastrulation [GO:0007369]; nervous system development [GO:0007399]; neuron differentiation [GO:0030182]; response to estradiol [GO:0032355]; response to retinoic acid [GO:0032526]; signal transduction [GO:0007165]	hit with GO BP
GN012270	Chromosome_5A	15336	4	393	34.74178403755869	0.8496540228478563	1.400161374531302	391	0	0.69164265129683	52	0	1.4637426295644977	339	0	0.5158730158730159	48	0	unmethylated (<10%)	P14600	Substance-P receptor (SPR) (NK-1 receptor) (NK-1R) (Tachykinin receptor 1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; aggressive behavior [GO:0002118]; angiotensin-mediated drinking behavior [GO:0003051]; associative learning [GO:0008306]; behavioral response to pain [GO:0048266]; eating behavior [GO:0042755]; learning or memory [GO:0007611]; long-term memory [GO:0007616]; neuropeptide signaling pathway [GO:0007218]; operant conditioning [GO:0035106]; phospholipase C-activating tachykinin receptor signaling pathway [GO:0007209]; positive regulation of action potential [GO:0045760]; positive regulation of blood pressure [GO:0045777]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of epithelial cell migration [GO:0010634]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of flagellated sperm motility [GO:1902093]; positive regulation of hormone secretion [GO:0046887]; positive regulation of leukocyte migration [GO:0002687]; positive regulation of lymphocyte proliferation [GO:0050671]; positive regulation of ossification [GO:0045778]; positive regulation of stress fiber assembly [GO:0051496]; positive regulation of synaptic transmission, cholinergic [GO:0032224]; positive regulation of synaptic transmission, GABAergic [GO:0032230]; positive regulation of uterine smooth muscle contraction [GO:0070474]; positive regulation of vascular permeability [GO:0043117]; positive regulation of vasoconstriction [GO:0045907]; regulation of blood pressure [GO:0008217]; regulation of smooth muscle cell migration [GO:0014910]; regulation of smooth muscle cell proliferation [GO:0048660]; regulation of uterine smooth muscle contraction [GO:0070472]; response to auditory stimulus [GO:0010996]; response to electrical stimulus [GO:0051602]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to hormone [GO:0009725]; response to nicotine [GO:0035094]; response to ozone [GO:0010193]; response to pain [GO:0048265]; response to progesterone [GO:0032570]; smooth muscle contraction involved in micturition [GO:0060083]; sperm ejaculation [GO:0042713]; tachykinin receptor signaling pathway [GO:0007217]	hit with GO BP
GN012271	Chromosome_5A	9697	5	127	34.55707950912653	0.4397766975868541	76.54278895329014	116	0.9051724137931034	50.46948356807512	7	0.5714285714285714	78.5845588235294	109	0.926605504587156	1.102810387762362	61	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012272	Chromosome_5A	993	1	52	42.90030211480362	1.1387614678899083	0.5777961205117623	52	0	0.5777961205117623	52	0	NA	NA	NA	0.6607073455110766	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012273	Chromosome_5A	786	1	34	42.87531806615776	0.9436440677966101	2.97339593114241	29	0	2.97339593114241	29	0	NA	NA	NA	0.4498337570897712	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012274	Chromosome_5A	1020	1	39	42.549019607843135	0.845429621915712	0.984936268829664	39	0	0.984936268829664	39	0	NA	NA	NA	1.5906680805938493	25	0	unmethylated (<10%)	O00463	TNF receptor-associated factor 5 (RING finger protein 84)	CD40 signaling pathway [GO:0023035]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; interleukin-17-mediated signaling pathway [GO:0097400]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; mRNA stabilization [GO:0048255]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; regulation of apoptotic process [GO:0042981]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; signal transduction [GO:0007165]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN012275	Chromosome_5A	543	1	23	41.988950276243095	0.9646250096547463	0.5151515151515151	23	0	0.5151515151515151	23	0	NA	NA	NA	0.8777062609713283	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012276	Chromosome_5A	2138	2	47	37.2310570626754	0.6344013384260867	0.65237651444548	47	0	0.65237651444548	47	0	NA	NA	NA	0.5952380952380952	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012277	Chromosome_5A	627	1	30	42.58373205741627	1.0784313725490196	0.6010171058714748	30	0	0.6010171058714748	30	0	NA	NA	NA	0.7122507122507122	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012278	Chromosome_5A	4040	4	96	34.306930693069305	0.807688703312265	0.6234228885260502	96	0	0.5500550055005501	37	0	0.6733167082294265	59	0	0.689935064935065	41	0	unmethylated (<10%)	P49003	Bone morphogenetic protein 5 (BMP-5)	allantois development [GO:1905069]; anterior head development [GO:0097065]; BMP signaling pathway [GO:0030509]; cardiac muscle tissue development [GO:0048738]; cardiac septum morphogenesis [GO:0060411]; chorio-allantoic fusion [GO:0060710]; ear development [GO:0043583]; endocardial cushion formation [GO:0003272]; heart development [GO:0007507]; heart trabecula morphogenesis [GO:0061384]; hindbrain development [GO:0030902]; male genitalia development [GO:0030539]; negative regulation of aldosterone biosynthetic process [GO:0032348]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cortisol biosynthetic process [GO:2000065]; negative regulation of insulin-like growth factor receptor signaling pathway [GO:0043569]; negative regulation of steroid biosynthetic process [GO:0010894]; neural fold elevation formation [GO:0021502]; pattern specification process [GO:0007389]; pericardium morphogenesis [GO:0003344]; pharyngeal system development [GO:0060037]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of dendrite development [GO:1900006]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of SMAD protein signal transduction [GO:0060391]; positive regulation of transcription by RNA polymerase II [GO:0045944]; skeletal system development [GO:0001501]; type B pancreatic cell development [GO:0003323]	hit with GO BP
GN012279	Chromosome_5A	764	2	10	38.35078534031414	0.35690927777258713	1.2396694214876034	10	0	1.2396694214876034	10	0	NA	NA	NA	1.0048055919615553	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012280	Chromosome_5A	225	1	7	50.22222222222222	0.5187747035573123	0.4366812227074236	7	0	0.4366812227074236	7	0	NA	NA	NA	1.9342359767891684	112	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012281	Chromosome_5A	3969	1	115	37.28898966994205	0.8421698417823701	1.097530556248441	115	0	1.097530556248441	115	0	NA	NA	NA	2.49728555917481	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012282	Chromosome_5A	30563	26	323	35.61495926447011	0.333289972112872	70.06090314913844	269	0.8550185873605948	74.47833065810593	62	0.8709677419354839	68.73127838438496	207	0.8502415458937198	60.47745358090186	11	0.7272727272727273	methylated (>=50%)	Q4R744	Protein HEATR9 (HEAT repeat-containing protein 9)	NA	hit, no GO BP
GN012283	Chromosome_5A	18425	5	508	35.902306648575305	0.855842412126173	1.2369670017564185	473	0	0.5361930294906166	17	0	1.2570637758044054	456	0	0.7232401157184185	37	0	unmethylated (<10%)	Q9GUM2	Beta-1,4-N-acetylgalactosaminyltransferase bre-4 (EC 2.4.1.244) (Bacillus thuringiensis toxin-resistant protein 4) (Bt toxin-resistant protein 4) (Beta-4-GalNAcT) (UDP-GalNAc:Glc-NAcbeta-R beta1,4-N-acetylgalactosaminyltransferase) (Cebeta4GalNAcT)	carbohydrate metabolic process [GO:0005975]; glycoprotein biosynthetic process [GO:0009101]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of Notch signaling pathway [GO:0045747]; response to toxic substance [GO:0009636]	hit with GO BP
GN012284	Chromosome_5A	19842	8	307	34.32617679669388	0.526488586037732	83.62750544895081	304	0.9473684210526315	74.47744774477448	13	1	83.99733214762117	291	0.9450171821305842	1.7983651226158037	55	0	methylated (>=50%)	Q96D70	R3H domain-containing protein 4	NA	hit, no GO BP
GN012285	Chromosome_5A	11634	12	256	36.05810555269039	0.6794739063480294	5.694491382223724	253	0.007905138339920948	3.178355660625164	104	0	6.887532693984307	149	0.013422818791946308	3.2909498878085266	56	0	unmethylated (<10%)	Q9VDG5	Sodium/calcium exchanger Calx (Na/Ca-exchange protein)	neuromuscular process controlling posture [GO:0050884]; phototransduction [GO:0007602]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN012286	Chromosome_5A	13272	6	346	37.08559373116335	0.7583903557295804	1.4342318209721525	341	0	0.683111954459203	59	0	1.5637267730960482	282	0	1.1006798316607316	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012287	Chromosome_5A	8571	4	269	36.37848559094621	0.9486219137681898	1.746615931632462	269	0	0.4570383912248629	23	0	1.841065809734217	246	0	0.9684473601999375	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012288	Chromosome_5A	3645	3	103	34.705075445816185	0.9385264957777745	0.6304728546409807	101	0	0.8875739644970414	16	0	0.5749574105621805	85	0	0.57684384013185	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012289	Chromosome_5A	5603	4	147	35.83794395859361	0.8171568603134131	0.7407407407407407	146	0	0.4291845493562232	18	0	0.7828356045230501	128	0	4.9464138499587795	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012290	Chromosome_5A	5729	4	133	33.51370221679176	0.8285167191496025	1.6745224510047134	131	0	0.5412719891745602	14	0	1.7888843370203469	117	0	0.6950477845351868	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012291	Chromosome_5A	16673	13	228	33.71318898818449	0.4827973524306217	81.31031820437876	224	0.9196428571428571	66.21507197290431	18	0.6666666666666666	82.36196319018404	206	0.941747572815534	0.6799830004249894	50	0	methylated (>=50%)	Q8IYB5	Stromal membrane-associated protein 1	regulation of clathrin-dependent endocytosis [GO:2000369]	hit with GO BP
GN012292	Chromosome_5A	54551	33	663	36.90124837308207	0.3672987921634002	85.92110927339874	659	0.960546282245827	89.83926521239954	57	1	85.5853196566059	602	0.9568106312292359	18.733608092918697	44	0.1590909090909091	methylated (>=50%)	O35134	DNA-directed RNA polymerase I subunit RPA1 (RNA polymerase I subunit A1) (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (DNA-directed RNA polymerase I subunit A) (RNA polymerase I 194 kDa subunit) (RPA194)	negative regulation of protein localization to nucleolus [GO:1904750]; nucleolar large rRNA transcription by RNA polymerase I [GO:0042790]; rRNA transcription [GO:0009303]; transcription by RNA polymerase I [GO:0006360]; transcription elongation by RNA polymerase I [GO:0006362]	hit with GO BP
GN012293	Chromosome_5A	1236	1	16	39.23948220064725	0.3384794440831137	58.81642512077295	16	0.6875	58.81642512077295	16	0.6875	NA	NA	NA	0.5685407454200885	32	0	methylated (>=50%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN012294	Chromosome_5A	22980	36	257	36.92776327241079	0.32830168226636924	52.60225885225885	256	0.63671875	71.7584072277062	139	0.8776978417266187	36.5371123895047	117	0.3504273504273504	0.639386189258312	52	0	methylated (>=50%)	Q9U943	Apolipophorins [Cleaved into: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]	lipid transport [GO:0006869]	hit with GO BP
GN012295	Chromosome_5A	5490	5	163	37.923497267759565	0.8317122656809832	0.4187855219862399	162	0	0.6119162640901772	81	0	0.2513264451270595	81	0	0.4742401379607674	72	0	unmethylated (<10%)	Q27403	Transcription factor glial cells missing (Protein glide)	dendrite morphogenesis [GO:0048813]; embryonic crystal cell differentiation [GO:0035165]; establishment of glial blood-brain barrier [GO:0060857]; glial cell development [GO:0021782]; glial cell differentiation [GO:0010001]; glial cell fate determination [GO:0007403]; gliogenesis [GO:0042063]; hemocyte development [GO:0007516]; negative regulation of crystal cell differentiation [GO:0042690]; neuron differentiation [GO:0030182]; plasmatocyte differentiation [GO:0042387]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of glial cell differentiation [GO:0045687]; positive regulation of glial cell proliferation [GO:0060252]; positive regulation of transcription by RNA polymerase II [GO:0045944]; posterior head segmentation [GO:0035289]; regulation of gene expression [GO:0010468]; regulation of hemocyte differentiation [GO:0045610]; regulation of phagocytosis [GO:0050764]; regulation of transcription by RNA polymerase II [GO:0006357]; retinal ganglion cell axon guidance [GO:0031290]	hit with GO BP
GN012296	Chromosome_5A	1346	3	44	42.42199108469539	0.7273888479489069	5.427547363031234	40	0	6.232876712328767	35	0	3.0425963488843815	5	0	4.38496583143508	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002684	Chromosome_5A	996	3	28	42.8714859437751	0.614273127753304	90.44776119402985	16	1	90.12345679012346	15	1	100	1	1	66.61270740590854	41	0.9024390243902439	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012297	Chromosome_5A	1311	1	4	40.503432494279174	0.302073732718894	84.43271767810026	4	1	84.43271767810026	4	1	NA	NA	NA	92.15611974232664	32	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012298	Chromosome_5A	10270	4	205	34.94644595910419	0.654508205639959	84.23917209658873	205	0.8926829268292683	45.439189189189186	11	0.36363636363636365	86.08367461655826	194	0.9226804123711341	34.37806072477963	19	0.3684210526315789	methylated (>=50%)	P00428	Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide VIa) (Cytochrome c oxidase polypeptide Vb)	mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	hit with GO BP
GN012299	Chromosome_5A	12722	12	132	34.68008174815281	0.34826495282475944	85.43928923988155	125	0.952	89.90342405618964	24	1	84.70926058865757	101	0.9405940594059405	92.03791469194313	27	0.9629629629629629	methylated (>=50%)	Q4WZV3	Ergothioneine biosynthesis protein A [Includes: L-histidine N(alpha)-methyltransferase (EC 2.1.1.44); Hercynylcysteine S-oxide synthase (EC 1.21.3.10)]	selenoneine biosynthetic process [GO:1903257]	hit with GO BP
GN012300	Chromosome_5A	25896	9	307	35.51899907321594	0.3759027257665509	74.89458536911853	254	0.84251968503937	52.50965250965251	13	0.6153846153846154	76.12256424738774	241	0.8547717842323651	50.165700082850044	54	0.5370370370370371	methylated (>=50%)	Q29RL9	Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1)	transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN012303	Chromosome_5A	7403	4	139	35.6206943131163	0.5919190861702605	30.643203883495147	137	0.22627737226277372	58.55263157894737	27	0.48148148148148145	25.271345875542693	110	0.16363636363636364	0.5574912891986062	41	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012304	Chromosome_5A	9458	9	104	34.59505180799324	0.36754705446925445	85.64787914003486	104	0.9134615384615384	92.68030139935415	17	1	84.55079764903442	87	0.896551724137931	72.59887005649718	5	0.8	methylated (>=50%)	Q96Q15	Serine/threonine-protein kinase SMG1 (SMG-1) (hSMG-1) (EC 2.7.11.1) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein) (Nonsense mediated mRNA decay-associated PI3K-related kinase SMG1)	DNA damage response [GO:0006974]; mRNA export from nucleus [GO:0006406]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; peptidyl-serine phosphorylation [GO:0018105]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; protein autophosphorylation [GO:0046777]; regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:2000622]; regulation of telomere maintenance [GO:0032204]	hit with GO BP
GN012305	Chromosome_5A	46041	67	496	37.077821941313175	0.31674465189184736	87.39330004831696	455	0.9384615384615385	79.62219993313273	134	0.8880597014925373	89.85891587991938	321	0.9595015576323987	0.7887517146776406	42	0	methylated (>=50%)	Q8BKX6	Serine/threonine-protein kinase SMG1 (SMG-1) (EC 2.7.11.1) (Lambda/iota protein kinase C-interacting protein) (Lambda-interacting protein) (Nonsense mediated mRNA decay-associated PI3K-related kinase SMG1)	DNA damage response [GO:0006974]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; peptidyl-serine phosphorylation [GO:0018105]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; protein autophosphorylation [GO:0046777]; regulation of telomere maintenance [GO:0032204]	hit with GO BP
GN012306	Chromosome_5A	618	1	32	46.92556634304207	0.9521883576484184	NA	0	NA	NA	NA	NA	NA	NA	NA	0.47619047619047616	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012307	Chromosome_5A	618	1	32	46.92556634304207	0.9521883576484184	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8099094807050977	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012308	Chromosome_5A	15836	12	241	35.67820156605203	0.479894717993908	83.565712399967	208	0.9134615384615384	67.27664155005382	13	0.6153846153846154	84.91779842744818	195	0.9333333333333333	4.241379310344827	40	0.025	methylated (>=50%)	Q9H8H0	Nucleolar protein 11	maturation of SSU-rRNA [GO:0030490]; positive regulation of transcription of nucleolar large rRNA by RNA polymerase I [GO:1901838]	hit with GO BP
GN012309	Chromosome_5A	774	1	0	39.01808785529716	0	NA	0	NA	NA	NA	NA	NA	NA	NA	68.99441340782123	14	0.7857142857142857	NA	NA	NA	NA	no Swiss-Prot hit
GN012310	Chromosome_5A	23347	24	273	35.03662140746135	0.3814792563246591	75.13507429085998	262	0.9045801526717557	86.06036536934074	51	1	73.33114754098361	211	0.8815165876777251	59.381898454746135	18	0.7222222222222222	methylated (>=50%)	A2A9C3	KICSTOR complex protein SZT2 (Seizure threshold 2 protein) (Transcript increased in glutamate resistance) (TIGR)	cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; central nervous system development [GO:0007417]; corpus callosum morphogenesis [GO:0021540]; negative regulation of TORC1 signaling [GO:1904262]; pigmentation [GO:0043473]; post-embryonic development [GO:0009791]; protein localization to lysosome [GO:0061462]; regulation of superoxide dismutase activity [GO:1901668]; response to nutrient levels [GO:0031667]	hit with GO BP
GN012311	Chromosome_5A	27146	13	346	34.28497752891771	0.43443082143246986	79.5309897056939	345	0.9101449275362319	70.39573820395738	26	0.7307692307692307	80.07421821966783	319	0.9247648902821317	63.21243523316062	5	0.6	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012312	Chromosome_5A	273	1	6	43.956043956043956	0.511875	28.598848368522074	6	0	28.598848368522074	6	0	NA	NA	NA	29.09090909090909	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012313	Chromosome_5A	249	1	4	44.17670682730924	0.32925619834710745	0	1	0	0	1	0	NA	NA	NA	1.9672131147540983	13	0	NA	Q58EG2	Erlin-1 (Endoplasmic reticulum lipid raft-associated protein 1)	negative regulation of cholesterol biosynthetic process [GO:0045541]; negative regulation of fatty acid biosynthetic process [GO:0045717]; SREBP signaling pathway [GO:0032933]	hit with GO BP
GN012315	Chromosome_5A	7373	7	229	38.5596093855961	0.8358243459854202	0.7106598984771574	229	0	0.6423000458785747	194	0	0.9028374892519346	35	0	0.7174048658764816	54	0	unmethylated (<10%)	Q9ULI1	NACHT and WD repeat domain-containing protein 2 (Leucine-rich repeat and WD repeat-containing protein KIAA1239)	NA	hit, no GO BP
GN012314	Chromosome_5A	549	1	34	43.169398907103826	1.3304347826086957	0.6048387096774194	34	0	0.6048387096774194	34	0	NA	NA	NA	0.7003209804493726	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012316	Chromosome_5A	330	1	15	44.54545454545455	0.9589306470360326	0.9400705052878966	15	0	0.9400705052878966	15	0	NA	NA	NA	2.595529920692141	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012317	Chromosome_5A	429	1	19	42.19114219114219	0.9988970588235294	0.4966887417218543	19	0	0.4966887417218543	19	0	NA	NA	NA	0.48488305761551626	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012318	Chromosome_5A	17195	13	352	34.66705437627217	0.6813626713076683	2.256936125353395	346	0	2.3360480068581224	93	0	2.234154168981053	253	0	0.9333899024183284	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012319	Chromosome_5A	3483	6	20	33.79270743611829	0.20904982264076202	65.9153005464481	20	0.8	78.486646884273	9	0.8888888888888888	55.18987341772152	11	0.7272727272727273	56.1128526645768	36	0.6944444444444444	methylated (>=50%)	B1AS42	NADH-cytochrome b5 reductase-like (EC 1.6.2.2)	NA	hit, no GO BP
GN012320	Chromosome_5A	348	1	3	39.367816091954026	0.23803009575923392	52.79503105590062	3	0.6666666666666666	52.79503105590062	3	0.6666666666666666	NA	NA	NA	61.36054421768708	21	0.5714285714285714	NA	NA	NA	NA	no Swiss-Prot hit
GN012321	Chromosome_5A	10134	7	160	35.38582987961318	0.5068229045543544	83.21413976297507	157	0.8662420382165605	69.45020746887967	35	0.7142857142857143	86.59033078880407	122	0.9098360655737705	49.17566799317794	60	0.4666666666666667	methylated (>=50%)	Q99575	Ribonucleases P/MRP protein subunit POP1 (hPOP1)	RNA processing [GO:0006396]; tRNA 5'-leader removal [GO:0001682]; tRNA decay [GO:0016078]; tRNA processing [GO:0008033]	hit with GO BP
GN012322	Chromosome_5A	25691	16	337	35.9308707329415	0.4072178569043254	76.13001523616049	308	0.8506493506493507	79.55729166666667	22	0.9090909090909091	75.95435130806193	286	0.8461538461538461	81.57894736842105	12	1	methylated (>=50%)	Q3MHR0	Acyl-protein thioesterase 1 (APT-1) (EC 3.1.2.-) (Lysophospholipase 1) (Lysophospholipase I) (LPL-I) (LysoPLA I) (Palmitoyl-protein hydrolase) (EC 3.1.2.22)	negative regulation of Golgi to plasma membrane protein transport [GO:0042997]; protein depalmitoylation [GO:0002084]	hit with GO BP
GN012323	Chromosome_5A	17247	6	250	35.24670957267931	0.4667229537742129	78.84740470924939	148	0.7364864864864865	79.76653696498055	5	1	78.81561238223419	143	0.7272727272727273	79.17472598323663	21	0.9047619047619048	methylated (>=50%)	Q9H841	NIPA-like protein 2	magnesium ion transport [GO:0015693]	hit with GO BP
GN012324	Chromosome_5A	18701	17	215	35.14785305598631	0.37227532734959323	83.74176548089592	211	0.9383886255924171	88.95348837209302	74	1	81.31995368583559	137	0.9051094890510949	86.32824665213329	45	0.9333333333333333	methylated (>=50%)	B0JZV4	Cytosolic carboxypeptidase-like protein 5 (EC 3.4.17.-) (EC 3.4.17.24) (ATP/GTP-binding protein-like 5) (Protein deglutamylase CCP5)	defense response to virus [GO:0051607]; proteolysis [GO:0006508]	hit with GO BP
GN012325	Chromosome_5A	44666	18	866	35.08932969148793	0.6320904272985042	75.76147996695002	847	0.8760330578512396	81.19584055459272	19	0.8947368421052632	75.67221328626536	828	0.8756038647342995	56.4011609158336	56	0.6607142857142857	methylated (>=50%)	Q02508	Protein HGV2	CENP-A containing chromatin assembly [GO:0034080]; DNA replication-dependent chromatin assembly [GO:0006335]	hit with GO BP
GN012326	Chromosome_5A	13119	7	240	35.22372132022258	0.5903748513543768	90.19583616482362	238	0.9243697478991597	90.5050505050505	7	1	90.18608208004079	231	0.922077922077922	77.37542556484061	56	0.8571428571428571	methylated (>=50%)	Q6PC91	Transcription factor BTF3 homolog 4 (Basic transcription factor 3-like 4)	NA	hit, no GO BP
GN012327	Chromosome_5A	632	2	10	41.29746835443038	0.37110980622431006	0	10	0	0	9	0	0	1	0	0.8030431107354185	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012328	Chromosome_5A	4712	4	133	37.92444821731749	0.78653383234059	1.312477526069759	132	0	1.264367816091954	38	0	1.3343799058084773	94	0	0.4044489383215369	41	0	unmethylated (<10%)	Q6P8Y1	Calcyphosin-like protein	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]; endothelial cell proliferation [GO:0001935]; gene expression [GO:0010467]; retina development in camera-type eye [GO:0060041]; vasculogenesis [GO:0001570]	hit with GO BP
GN012329	Chromosome_5A	1115	3	36	41.16591928251121	0.766557176686273	0.7052186177715092	36	0	0.6756756756756757	22	0	0.7374631268436578	14	0	0.48091373609858734	68	0	unmethylated (<10%)	Q6PBD7	DNA-binding protein inhibitor ID-2 (Inhibitor of DNA binding 2) (Inhibitor of differentiation 2)	cellular senescence [GO:0090398]; embryonic digestive tract morphogenesis [GO:0048557]; endodermal digestive tract morphogenesis [GO:0061031]; negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron differentiation [GO:0030182]; neuron fate commitment [GO:0048663]; positive regulation of blood pressure [GO:0045777]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of smooth muscle cell proliferation [GO:0048661]; regulation of circadian rhythm [GO:0042752]; regulation of gene expression [GO:0010468]; regulation of neural precursor cell proliferation [GO:2000177]; regulation of neuron differentiation [GO:0045664]	hit with GO BP
GN012330	Chromosome_5A	34979	19	505	34.43494668229509	0.4877767223263867	74.58192057927705	495	0.8080808080808081	77.53369945082376	41	0.926829268292683	74.40165858715204	454	0.7973568281938326	0.6027727546714888	51	0	methylated (>=50%)	O15118	NPC intracellular cholesterol transporter 1 (Niemann-Pick C1 protein)	autophagy [GO:0006914]; bile acid metabolic process [GO:0008206]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol transport [GO:0030301]; establishment of protein localization to membrane [GO:0090150]; gene expression [GO:0010467]; glycoprotein biosynthetic process [GO:0009101]; intestinal cholesterol absorption [GO:0030299]; intracellular cholesterol transport [GO:0032367]; intracellular lipid transport [GO:0032365]; lysosomal transport [GO:0007041]; lysosome to ER cholesterol transport [GO:0090120]; membrane raft organization [GO:0031579]; negative regulation of epithelial cell apoptotic process [GO:1904036]; negative regulation of TORC1 signaling [GO:1904262]; response to cadmium ion [GO:0046686]; sterol transport [GO:0015918]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN012331	Chromosome_5A	21002	10	215	33.94438624892867	0.3566548377536945	69.82824720134948	213	0.8215962441314554	59.68703427719821	25	0.64	70.99145299145299	188	0.8457446808510638	0.5934718100890207	37	0	methylated (>=50%)	Q96S53	Dual specificity testis-specific protein kinase 2 (EC 2.7.12.1) (Testicular protein kinase 2)	actin cytoskeleton organization [GO:0030036]; focal adhesion assembly [GO:0048041]; protein phosphorylation [GO:0006468]; spermatogenesis [GO:0007283]	hit with GO BP
GN012332	Chromosome_5A	22815	16	262	34.50799912338374	0.38605556847244826	85.23283952074603	251	0.896414342629482	81.40043763676148	39	0.8974358974358975	85.69632815084353	212	0.8962264150943396	0.665680473372781	39	0	methylated (>=50%)	Q9HCJ3	Ribonucleoprotein PTB-binding 2 (Protein raver-2)	NA	hit, no GO BP
GN012333	Chromosome_5A	3770	3	80	43.44827586206897	0.45145848333300903	10.492505353319057	28	0	10.492505353319057	28	0	NA	NA	NA	0.7654836464857342	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012334	Chromosome_5A	396	1	13	45.707070707070706	0.6355555555555555	0	13	0	0	13	0	NA	NA	NA	0.49782202862476665	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012335	Chromosome_5A	2253	3	16	32.001775410563695	0.27888409228055516	77.17879604672058	16	0.9375	79.78142076502732	5	1	75.90361445783132	11	0.9090909090909091	76.98081734778982	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012336	Chromosome_5A	1831	2	18	35.77280174767886	0.3084915197124565	75.46689303904924	18	1	83.92226148409894	9	1	67.6470588235294	9	1	52.490421455938694	16	0.6875	methylated (>=50%)	Q9W3T7	UPAR/Ly6 domain-containing protein bou (Protein boudin)	regulation of synaptic transmission, cholinergic [GO:0032222]; regulation of tube architecture, open tracheal system [GO:0035152]; septate junction assembly [GO:0019991]; sleep [GO:0030431]	hit with GO BP
GN012338	Chromosome_5A	54666	25	760	35.17177038744375	0.45048529069157583	68.32716257152474	691	0.7322720694645442	77.77777777777777	62	0.7419354838709677	67.46964134425303	629	0.7313195548489666	1.6770186335403727	62	0	methylated (>=50%)	P97874	Cyclin-G-associated kinase (EC 2.7.11.1)	cell development [GO:0048468]; clathrin coat assembly [GO:0048268]; clathrin coat disassembly [GO:0072318]; clathrin-dependent endocytosis [GO:0072583]; endoplasmic reticulum organization [GO:0007029]; epidermal cell differentiation [GO:0009913]; establishment of skin barrier [GO:0061436]; forebrain morphogenesis [GO:0048853]; Golgi organization [GO:0007030]; Golgi to lysosome transport [GO:0090160]; intrahepatic bile duct development [GO:0035622]; negative regulation of neuron projection development [GO:0010977]; positive regulation of neural precursor cell proliferation [GO:2000179]; protein localization to Golgi apparatus [GO:0034067]; protein localization to plasma membrane [GO:0072659]; receptor-mediated endocytosis [GO:0006898]; regulation of clathrin coat assembly [GO:1905443]	hit with GO BP
GN012339	Chromosome_5A	11458	5	76	36.184325362192354	0.20771342489527958	83.33333333333333	75	0.96	88.66396761133603	13	1	82.17327459618208	62	0.9516129032258065	46.606092998396576	31	0.41935483870967744	methylated (>=50%)	Q9JHW5	Vesicle-associated membrane protein 7 (VAMP-7) (Synaptobrevin-like protein 1)	calcium-ion regulated exocytosis [GO:0017156]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; endosome to lysosome transport [GO:0008333]; eosinophil degranulation [GO:0043308]; exocytosis [GO:0006887]; Golgi to plasma membrane protein transport [GO:0043001]; natural killer cell degranulation [GO:0043320]; neutrophil degranulation [GO:0043312]; phagocytosis, engulfment [GO:0006911]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of histamine secretion by mast cell [GO:1903595]; regulation of protein targeting to vacuolar membrane [GO:1900483]; SNARE complex assembly [GO:0035493]; synaptic vesicle exocytosis [GO:0016079]; triglyceride transport [GO:0034197]; vesicle fusion [GO:0006906]; vesicle fusion with Golgi apparatus [GO:0048280]; vesicle transport along microtubule [GO:0047496]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN012342	Chromosome_5A	10340	7	243	34.59381044487427	0.7882477172495186	0.8064516129032258	236	0	0.639763779527559	56	0	0.8421052631578947	180	0	0.6198347107438017	61	0	unmethylated (<10%)	Q91XQ5	Carbohydrate sulfotransferase 15 (EC 2.8.2.33) (B-cell RAG-associated gene protein) (N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase) (GalNAc4S-6ST)	hexose biosynthetic process [GO:0019319]	hit with GO BP
GN012343	Chromosome_5A	23064	11	624	36.26430801248699	0.8231066133124361	0.9401932619482893	614	0	0.6450351837372947	154	0	0.9993729424674714	460	0	0.6749915626054674	67	0	unmethylated (<10%)	Q9JKS4	LIM domain-binding protein 3 (Protein cypher) (Protein oracle) (Z-band alternatively spliced PDZ-motif protein)	actin cytoskeleton organization [GO:0030036]; heart development [GO:0007507]; muscle structure development [GO:0061061]; sarcomere organization [GO:0045214]	hit with GO BP
GN012358	Chromosome_5A	1656	1	72	43.65942028985507	0.9142857142857143	0.6103763987792472	71	0	0.6103763987792472	71	0	NA	NA	NA	0.6257822277847309	41	0	unmethylated (<10%)	O17444	Vesicular acetylcholine transporter (VAChT)	chemical synaptic transmission [GO:0007268]	hit with GO BP
GN012357	Chromosome_5A	21315	13	502	35.62749237626085	0.7427241680896256	0.743302914336179	499	0	0.6244146113019045	78	0	0.7591874191799107	421	0	0.5436520626798849	55	0	unmethylated (<10%)	B2ZGJ1	Choline O-acetyltransferase (CHOACTase) (ChAT) (Choline acetylase) (EC 2.3.1.6)	acetylcholine biosynthetic process [GO:0008292]; locomotory behavior [GO:0007626]; neuromuscular synaptic transmission [GO:0007274]	hit with GO BP
GN012356	Chromosome_5A	9336	6	134	34.87574978577549	0.4794710971858921	82.81548757170172	133	0.9774436090225563	79.7872340425532	23	1	83.19870759289176	110	0.9727272727272728	69.87740805604203	21	0.9523809523809523	methylated (>=50%)	Q0P5C2	Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]	tetrahydrofolate interconversion [GO:0035999]	hit with GO BP
GN012355	Chromosome_5A	3176	4	45	36.36649874055416	0.431097410157876	71.71767028627838	36	0.9166666666666666	75.21079258010118	14	0.9285714285714286	70.2721563154222	22	0.9090909090909091	73.57664233576642	38	0.8421052631578947	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012354	Chromosome_5A	369	1	14	51.21951219512195	0.5812331233123312	NA	0	NA	NA	NA	NA	NA	NA	NA	4.7518479408658925	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012353	Chromosome_5A	5518	3	84	34.84958318231243	0.5015809943058234	74.5206562561771	84	0.7380952380952381	53.583061889250814	9	0.4444444444444444	77.41282339707537	75	0.7733333333333333	0.7142857142857143	8	0	methylated (>=50%)	Q9CQZ5	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Complex I-B14) (CI-B14) (NADH-ubiquinone oxidoreductase B14 subunit)	aerobic respiration [GO:0009060]; mitochondrial respiratory chain complex I assembly [GO:0032981]; proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	hit with GO BP
GN012352	Chromosome_5A	2640	2	21	38.71212121212121	0.21325947723732042	63.1704410011919	21	0.7619047619047619	60.79295154185022	8	0.75	64.05228758169935	13	0.7692307692307693	23.741007194244606	21	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012351	Chromosome_5A	10518	8	91	35.120745388857195	0.28255963894261765	79.7575524340966	91	0.8461538461538461	85.16666666666667	27	0.8888888888888888	78.13360020015011	64	0.828125	88.2762046696473	38	1	methylated (>=50%)	Q8C2E4	Pentatricopeptide repeat-containing protein 1, mitochondrial	mitochondrial RNA modification [GO:1900864]; tRNA 3'-end processing [GO:0042780]	hit with GO BP
GN012350	Chromosome_5A	252	1	13	50	0.875	0.2403846153846154	13	0	0.2403846153846154	13	0	NA	NA	NA	0.43859649122807015	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012349	Chromosome_5A	2473	2	80	36.59522846744844	0.9680197283438369	1.4559234144395692	80	0	1.8561484918793503	38	0	1.154249737670514	42	0	0.5132850241545893	68	0	unmethylated (<10%)	Q24155	Protein trunk	negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of cell differentiation [GO:0045596]; terminal region determination [GO:0007362]; torso signaling pathway [GO:0008293]	hit with GO BP
GN012348	Chromosome_5A	2149	6	29	36.52861796184272	0.4071564835624314	62.98788694481831	29	0.7241379310344828	60.316139767054906	23	0.6956521739130435	74.29577464788733	6	0.8333333333333334	43.1126147897535	44	0.36363636363636365	methylated (>=50%)	Q3T0J1	F-box only protein 4	positive regulation of protein ubiquitination [GO:0031398]; protein polyubiquitination [GO:0000209]; regulation of protein stability [GO:0031647]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; telomere maintenance [GO:0000723]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012347	Chromosome_5A	17708	13	249	35.71267223853626	0.4445931813259434	86.86266974122469	240	0.9041666666666667	94.85179407176287	17	1	86.14794138171668	223	0.8968609865470852	46.214355948869226	26	0.46153846153846156	methylated (>=50%)	Q3THK3	General transcription factor IIF subunit 1 (Transcription initiation factor IIF subunit alpha) (TFIIF-alpha)	negative regulation of protein binding [GO:0032091]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; response to virus [GO:0009615]; transcription elongation by RNA polymerase II [GO:0006368]; transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN012346	Chromosome_5A	11967	5	187	34.829113395170054	0.5152803346124223	60.47606924643585	176	0.6022727272727273	56.85131195335277	9	0.6666666666666666	60.82287308228731	167	0.5988023952095808	76.11790655704833	67	0.746268656716418	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012345	Chromosome_5A	13393	10	134	37.101470917643546	0.29226547588803553	87.5	134	0.9701492537313433	90.76526857983812	67	0.9850746268656716	85.3172651254304	67	0.9552238805970149	71.76560121765601	29	0.7241379310344828	methylated (>=50%)	E9Q238	KN motif and ankyrin repeat domains 1 (Ankyrin repeat domain-containing protein 15) (Kidney ankyrin repeat-containing protein)	actin cytoskeleton organization [GO:0030036]; cell population proliferation [GO:0008283]; cortical microtubule organization [GO:0043622]; negative regulation of actin filament polymerization [GO:0030837]; negative regulation of cell migration [GO:0030336]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of lamellipodium morphogenesis [GO:2000393]; negative regulation of neuron projection development [GO:0010977]; negative regulation of Rho protein signal transduction [GO:0035024]; negative regulation of ruffle assembly [GO:1900028]; negative regulation of substrate adhesion-dependent cell spreading [GO:1900025]; podocyte cell migration [GO:0090521]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of Wnt signaling pathway [GO:0030177]; positive regulation of wound healing [GO:0090303]; regulation of establishment of cell polarity [GO:2000114]; regulation of Rho protein signal transduction [GO:0035023]	hit with GO BP
GN012344	Chromosome_5A	3321	2	93	38.69316470942487	0.7570371786575681	4.9960348929421095	93	0	4.790419161676646	41	0	5.108295872496935	52	0	8.970792767732963	32	0	unmethylated (<10%)	P09481	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of appetite [GO:0032098]; response to nicotine [GO:0035094]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012375	Chromosome_5A	12534	20	181	36.42891335567257	0.4439351055353003	34.80419194704909	179	0.3687150837988827	29.44364161849711	61	0.26229508196721313	36.63378545006165	118	0.423728813559322	21.689259645464023	44	0.2727272727272727	sparse (10-50%)	E9PYQ0	Radial spoke head 10 homolog B	NA	hit, no GO BP
GN012376	Chromosome_5A	2185	7	69	37.66590389016018	0.8959388148042502	0.4748338081671415	69	0	0.5973715651135006	34	0	0.3367003367003367	35	0	1.4743589743589745	65	0	unmethylated (<10%)	Q06806	Tyrosine-protein kinase receptor Tie-1 (EC 2.7.10.1)	aortic valve morphogenesis [GO:0003180]; blood vessel development [GO:0001568]; branching involved in lymph vessel morphogenesis [GO:0060854]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; endothelial cell migration [GO:0043542]; in utero embryonic development [GO:0001701]; lymphatic endothelial cell differentiation [GO:0060836]; negative regulation of angiogenesis [GO:0016525]; negative regulation of cell migration [GO:0030336]; positive regulation of angiogenesis [GO:0045766]; regulation of endothelial cell proliferation [GO:0001936]; regulation of extracellular matrix assembly [GO:1901201]; response to retinoic acid [GO:0032526]; tissue remodeling [GO:0048771]; vasculogenesis [GO:0001570]	hit with GO BP
GN012377	Chromosome_5A	15435	7	409	36.287657920310984	0.8049386641994979	0.7867607162235486	406	0	0.29205607476635514	51	0	0.8374207441081469	355	0	0.3462204270051933	38	0	unmethylated (<10%)	Q17RR3	Pancreatic lipase-related protein 3 (PL-RP3) (EC 3.1.1.3)	cholesterol homeostasis [GO:0042632]; fatty acid biosynthetic process [GO:0006633]; high-density lipoprotein particle remodeling [GO:0034375]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN012378	Chromosome_5A	13600	6	407	37.088235294117645	0.8711247758134768	4.459655673096868	395	0	0.8426966292134831	30	0	4.671717171717172	365	0	0.45292785506308636	49	0	unmethylated (<10%)	P06857	Inactive pancreatic lipase-related protein 1 (PL-RP1)	lipid metabolic process [GO:0006629]	hit with GO BP
GN012379	Chromosome_5A	2730	1	116	44.02930402930403	0.8767805972008804	0	10	0	0	10	0	NA	NA	NA	0.8805917576611483	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012380	Chromosome_5A	7979	6	184	35.05451811003885	0.7510622863533165	0.6467156987065686	167	0	0.9073233959818535	42	0	0.5833201954910926	125	0	0.5015045135406219	38	0	unmethylated (<10%)	Q6P8U6	Pancreatic triacylglycerol lipase (PL) (PTL) (Pancreatic lipase) (EC 3.1.1.3)	cholesterol homeostasis [GO:0042632]; fatty acid biosynthetic process [GO:0006633]; high-density lipoprotein particle remodeling [GO:0034375]; intestinal cholesterol absorption [GO:0030299]; lipid metabolic process [GO:0006629]; positive regulation of triglyceride lipase activity [GO:0061365]; post-embryonic development [GO:0009791]; retinoid metabolic process [GO:0001523]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN012381	Chromosome_5A	453	1	19	45.6953642384106	0.8195581793944011	0.7204610951008645	19	0	0.7204610951008645	19	0	NA	NA	NA	0.6584723441615452	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012382	Chromosome_5A	639	1	25	36.46322378716745	1.210961188599151	1.6540008940545374	25	0	1.6540008940545374	25	0	NA	NA	NA	5.247813411078718	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012383	Chromosome_5A	723	1	27	43.015214384508994	0.8110095554632323	0.5228758169934641	26	0	0.5228758169934641	26	0	NA	NA	NA	0.3163444639718805	51	0	unmethylated (<10%)	Q5FW38	Nuclear factor interleukin-3-regulated protein	circadian rhythm [GO:0007623]; immune response [GO:0006955]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of DNA-templated transcription [GO:0006355]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN012384	Chromosome_5A	15765	23	180	35.566127497621316	0.36195744012147135	89.27597955706985	180	0.9555555555555556	91.98047419804742	54	0.9814814814814815	88.40171325518484	126	0.9444444444444444	43.25153374233129	14	0.2857142857142857	methylated (>=50%)	Q80Y17	Lethal(2) giant larvae protein homolog 1 (LLGL) (Mgl-1) (Mlgl)	axonogenesis [GO:0007409]; brain development [GO:0007420]; cortical actin cytoskeleton organization [GO:0030866]; establishment of spindle orientation [GO:0051294]; Golgi to plasma membrane transport [GO:0006893]; maintenance of apical/basal cell polarity [GO:0035090]; protein-containing complex assembly [GO:0065003]; regulation of establishment or maintenance of cell polarity [GO:0032878]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN012385	Chromosome_5A	1853	4	13	33.5671883432272	0.2497175141242938	73.69614512471655	13	1	78.31632653061224	6	1	70	7	1	68.79194630872483	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012386	Chromosome_5A	384	1	9	44.53125	0.48	88.05970149253731	6	1	88.05970149253731	6	1	NA	NA	NA	77.46870653685674	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012387	Chromosome_5A	5762	11	170	37.81673030197848	0.8256002319508993	0.6952344836303881	170	0	0.984251968503937	69	0	0.5140859551717047	101	0	0.45757071547420963	39	0	unmethylated (<10%)	Q47944	L-sorbose 1-dehydrogenase (SDH) (EC 1.1.99.32)	NA	hit, no GO BP
GN012390	Chromosome_5A	10489	10	309	36.42863952712365	0.889629293336305	0.7410374524334068	309	0	0.8199643493761141	62	0	0.722851979628717	247	0	0.4961832061068702	64	0	unmethylated (<10%)	Q68F72	Solute carrier family 15 member 4	dipeptide import across plasma membrane [GO:0140206]; mast cell homeostasis [GO:0033023]; peptidoglycan transport [GO:0015835]; positive regulation of innate immune response [GO:0045089]; positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway [GO:0070430]; positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway [GO:0070434]; positive regulation of toll-like receptor 7 signaling pathway [GO:0034157]; positive regulation of toll-like receptor 8 signaling pathway [GO:0034161]; positive regulation of toll-like receptor 9 signaling pathway [GO:0034165]; regulation of isotype switching to IgG isotypes [GO:0048302]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]	hit with GO BP
GN012391	Chromosome_5A	5141	2	139	37.52188290215911	0.7682621082621083	0.8219657222805177	104	0	0.6361708573159649	60	0	1.0757136946628052	44	0	0.572737686139748	53	0	unmethylated (<10%)	Q80T11	pre-mRNA splicing regulator USH1G (Jackson shaker protein) (Scaffold protein containing ankyrin repeats and SAM domain) (Usher syndrome type-1G protein homolog)	equilibrioception [GO:0050957]; inner ear morphogenesis [GO:0042472]; inner ear receptor cell differentiation [GO:0060113]; inner ear receptor cell stereocilium organization [GO:0060122]; photoreceptor cell maintenance [GO:0045494]; regulation of clathrin-dependent endocytosis [GO:2000369]; sensory perception of light stimulus [GO:0050953]; sensory perception of sound [GO:0007605]	hit with GO BP
GN012392	Chromosome_5A	447	1	9	46.085011185682326	0.37934936350777937	1.5748031496062993	9	0	1.5748031496062993	9	0	NA	NA	NA	0.5960568546538285	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012393	Chromosome_5A	12235	4	249	37.54801798120147	0.5775479140603835	90.48834982444941	240	0.9291666666666667	75.54697554697555	14	0.6428571428571429	91.4759676733305	226	0.9469026548672567	12.775919732441471	33	0.24242424242424243	methylated (>=50%)	Q14AM7	HUWE1-associated protein modifying stress responses	negative regulation of signal transduction by p53 class mediator [GO:1901797]; regulation of cellular response to stress [GO:0080135]	hit with GO BP
GN012394	Chromosome_5A	43526	31	606	34.558654597252215	0.46705322228447216	85.6824807845216	581	0.9208261617900172	91.67280766396463	39	0.9743589743589743	85.21818597212703	542	0.9169741697416974	38.51196329072435	34	0.47058823529411764	methylated (>=50%)	Q93009	Ubiquitin C-terminal hydrolase 7 (EC 3.4.19.12) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7)	antiviral innate immune response [GO:0140374]; DNA alkylation repair [GO:0006307]; monoubiquitinated protein deubiquitination [GO:0035520]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of TORC1 signaling [GO:1904262]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; regulation of circadian rhythm [GO:0042752]; regulation of establishment of protein localization to telomere [GO:0070203]; regulation of protein stability [GO:0031647]; regulation of retrograde transport, endosome to Golgi [GO:1905279]; regulation of signal transduction by p53 class mediator [GO:1901796]; regulation of telomere capping [GO:1904353]; regulation of tumor necrosis factor-mediated signaling pathway [GO:0010803]; symbiont-mediated disruption of host cell PML body [GO:0075342]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN012395	Chromosome_5A	5410	7	78	34.04805914972273	0.4979044544502025	72.89719626168224	63	0.7301587301587301	64.43768996960486	17	0.6470588235294118	75.81151832460733	46	0.7608695652173914	71.90277051751175	68	0.6176470588235294	methylated (>=50%)	Q5XHC1	Cilia-and flagella-associated protein 96	NA	hit, no GO BP
GN012396	Chromosome_5A	8902	7	117	36.430015726802964	0.4055808280821774	90.19202363367799	115	0.9739130434782609	95.35628502802241	44	1	87.17228464419476	71	0.9577464788732394	95.99032146560664	42	1	methylated (>=50%)	Q9W6K1	Double-strand break repair protein MRE11 (EC 3.1.-.-)	DNA damage response [GO:0006974]; DNA strand resection involved in replication fork processing [GO:0110025]; double-strand break repair via homologous recombination [GO:0000724]; double-strand break repair via nonhomologous end joining [GO:0006303]; meiotic DNA double-strand break formation [GO:0042138]; metaphase chromosome alignment [GO:0051310]; mitochondrial double-strand break repair via homologous recombination [GO:0097552]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; negative regulation of double-strand break repair via nonhomologous end joining [GO:2001033]; R-loop processing [GO:0062176]; telomere maintenance [GO:0000723]	hit with GO BP
GN012397	Chromosome_5A	21163	22	230	33.79955582856873	0.3817902126907249	80.52149887756865	230	0.8652173913043478	88.74878758486906	34	0.9117647058823529	79.41349356671674	196	0.8571428571428571	6.222428604597168	55	0	methylated (>=50%)	O60763	General vesicular transport factor p115 (Protein USO1 homolog) (Transcytosis-associated protein) (TAP) (Vesicle-docking protein)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi vesicle docking [GO:0048211]; intracellular protein transport [GO:0006886]; membrane fusion [GO:0061025]; transcytosis [GO:0045056]; vesicle fusion with Golgi apparatus [GO:0048280]	hit with GO BP
GN012398	Chromosome_5A	13127	14	229	36.32970214062619	0.5292269204632281	81.84745277618775	227	0.9118942731277533	73.78777231201687	25	0.72	82.7610929658249	202	0.9356435643564357	39.53051643192488	16	0.3125	methylated (>=50%)	A1L2I9	Transmembrane protein 214-B	NA	hit, no GO BP
GN012399	Chromosome_5A	32454	12	270	32.98514820977383	0.3066874508735814	82.5427439532944	269	0.9330855018587361	62.99559471365639	12	0.75	83.2621737015619	257	0.9416342412451362	58.7382779198636	47	0.6595744680851063	methylated (>=50%)	Q8N6T3	ADP-ribosylation factor GTPase-activating protein 1 (ARF GAP 1) (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1 GAP) (ARF1-directed GTPase-activating protein)	regulation of ARF protein signal transduction [GO:0032012]; regulation of endocytosis [GO:0030100]	hit with GO BP
GN012400	Chromosome_5A	3156	3	69	34.664131812420784	0.7429049040511727	0.6623931623931624	66	0	0.6125574272588055	32	0	0.7253384912959381	34	0	0.689375506893755	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012401	Chromosome_5A	657	1	31	43.531202435312025	1.0030534351145037	1.0535557506584723	31	0	1.0535557506584723	31	0	NA	NA	NA	0.5125113053964425	54	0	unmethylated (<10%)	Q0V9X5	Class E basic helix-loop-helix protein 22 (bHLHe22) (Class B basic helix-loop-helix protein 5) (bHLHb5)	axon development [GO:0061564]; positive regulation of transcription by RNA polymerase II [GO:0045944]; sensory organ development [GO:0007423]	hit with GO BP
GN012402	Chromosome_5A	31375	36	334	35.22868525896414	0.34504822986809	83.96546121349984	327	0.9388379204892966	92.59983244903658	66	0.9848484848484849	82.24387527839643	261	0.9272030651340997	77.10336538461539	27	0.8888888888888888	methylated (>=50%)	O60306	RNA helicase aquarius (EC 3.6.4.13) (Intron-binding protein of 160 kDa) (IBP160)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN012403	Chromosome_5A	10533	13	103	33.52321275989747	0.3499134649560487	85.50158198399404	89	0.9775280898876404	85.53758325404377	19	1	85.49282739472467	70	0.9714285714285714	41.33885438233264	10	0.5	methylated (>=50%)	Q58CR3	Eukaryotic translation initiation factor 2D (eIF2d) (Ligatin)	formation of translation preinitiation complex [GO:0001731]	hit with GO BP
GN012404	Chromosome_5A	34124	41	358	33.9086859688196	0.36561570090674333	68.52176256569196	354	0.7909604519774012	71.57148053837759	101	0.8415841584158416	67.5216224276767	253	0.7707509881422925	59.1328232293506	71	0.6056338028169014	methylated (>=50%)	Q9C093	Sperm flagella and cilia-associated protein 2 (Protein KPL2) (Sperm flagellar protein 2)	brain morphogenesis [GO:0048854]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; respiratory system development [GO:0060541]; skeletal system morphogenesis [GO:0048705]; sperm axoneme assembly [GO:0007288]; spermatogenesis [GO:0007283]	hit with GO BP
GN012405	Chromosome_5A	27145	30	255	33.61208325658501	0.33329741296810894	84.34044454372835	254	0.9173228346456693	83.46727898966705	35	0.9142857142857143	84.4345459044791	219	0.9178082191780822	59.972565157750346	54	0.5740740740740741	methylated (>=50%)	P47245	Nardilysin (EC 3.4.24.61) (N-arginine dibasic convertase) (NRD convertase) (NRD-C) (Nardilysin convertase)	negative regulation of cold-induced thermogenesis [GO:0120163]; positive regulation of axonogenesis [GO:0050772]; positive regulation of membrane protein ectodomain proteolysis [GO:0051044]; positive regulation of myelination [GO:0031643]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; proteolysis [GO:0006508]	hit with GO BP
GN012406	Chromosome_5A	8720	5	133	35.5045871559633	0.4851174080669132	85.74155828660065	131	0.9465648854961832	82.45125348189416	7	0.8571428571428571	85.88880578409375	124	0.9516129032258065	85.51307847082495	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012407	Chromosome_5A	1269	1	31	41.765169424743895	0.5669750951227949	38.72832369942196	30	0.26666666666666666	38.72832369942196	30	0.26666666666666666	NA	NA	NA	0.9365994236311239	67	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012408	Chromosome_5A	1614	3	51	38.599752168525406	0.851653354302032	1.5544041450777202	13	0	1.5544041450777202	13	0	NA	NA	NA	0.6589147286821705	52	0	unmethylated (<10%)	Q91312	Alpha-crystallin B chain (Alpha(B)-crystallin)	negative regulation of apoptotic process [GO:0043066]; protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN012409	Chromosome_5A	1614	3	51	38.66171003717472	0.8487466875637999	0	3	0	0	3	0	NA	NA	NA	1.5725518227305217	55	0	NA	Q91312	Alpha-crystallin B chain (Alpha(B)-crystallin)	negative regulation of apoptotic process [GO:0043066]; protein refolding [GO:0042026]; response to heat [GO:0009408]	hit with GO BP
GN012410	Chromosome_5A	36741	30	886	37.004980811627334	0.7045024754577309	59.863932202056745	883	0.79841449603624	53.107842472717415	287	0.662020905923345	62.62463992909373	596	0.8640939597315436	57.181942544459645	17	0.5294117647058824	methylated (>=50%)	O43451	Maltase-glucoamylase (Alpha-1,4-glucosidase) (EC 3.2.1.20)	dextrin catabolic process [GO:1901027]; maltose catabolic process [GO:0000025]; starch catabolic process [GO:0005983]	hit with GO BP
GN012411	Chromosome_5A	17731	17	222	34.9218882183746	0.41105701754385965	79.29423042358157	215	0.9302325581395349	87.00754400670579	19	0.9473684210526315	78.70047748096529	196	0.9285714285714286	92.25456339417859	35	1	methylated (>=50%)	Q6NXW6	Cell cycle checkpoint protein RAD17	DNA damage response [GO:0006974]; DNA repair [GO:0006281]; mitotic DNA replication checkpoint signaling [GO:0033314]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; negative regulation of DNA replication [GO:0008156]; protein localization to site of double-strand break [GO:1990166]; regulation of phosphorylation [GO:0042325]	hit with GO BP
GN012412	Chromosome_5A	795	1	10	43.522012578616355	0.2682186234817814	86.46616541353383	10	1	86.46616541353383	10	1	NA	NA	NA	72.63986013986013	21	0.8571428571428571	methylated (>=50%)	Q0V9J0	Transmembrane protein 69	NA	hit, no GO BP
GN012413	Chromosome_5A	5366	4	52	36.95490122996645	0.2856271304419036	84.66809421841542	52	0.9423076923076923	87.79714738510302	17	1	83.5093896713615	35	0.9142857142857143	75.91240875912409	17	0.8823529411764706	methylated (>=50%)	O62742	Sterol carrier protein 2 (SCP-2) (Acetyl-CoA C-myristoyltransferase) (EC 2.3.1.155) (Non-specific lipid-transfer protein) (NSL-TP) (Propanoyl-CoA C-acyltransferase) (EC 2.3.1.176) (SCP-2/3-oxoacyl-CoA thiolase) (SCP-2/thiolase) (EC 2.3.1.16) (SCP-chi) (SCPX) (Sterol carrier protein X) (SCP-X)	bile acid metabolic process [GO:0008206]; fatty acid beta-oxidation [GO:0006635]; intracellular cholesterol transport [GO:0032367]; regulation of lipid metabolic process [GO:0019216]; regulation of phospholipid biosynthetic process [GO:0071071]; sterol transport [GO:0015918]	hit with GO BP
GN012414	Chromosome_5A	16086	8	191	34.87504662439388	0.3905957284515637	79.33491686460808	173	0.7803468208092486	94.0152339499456	19	1	77.63191113355214	154	0.7532467532467533	70.6896551724138	45	0.7333333333333333	methylated (>=50%)	Q6PAY8	Hydroxysteroid dehydrogenase-like protein 2 (EC 1.-.-.-)	NA	hit, no GO BP
GN012415	Chromosome_5A	4522	4	47	37.107474568774876	0.3023415272561739	78.89335118250781	45	0.7777777777777778	75	4	0.75	79.37782237832414	41	0.7804878048780488	37.18674211802749	22	0.3181818181818182	methylated (>=50%)	Q17Q97	Required for excision 1-B domain-containing protein	NA	hit, no GO BP
GN012416	Chromosome_5A	7088	14	58	33.12641083521445	0.3045857829245433	88.28967642526965	58	0.9310344827586207	91.99346405228758	22	0.9545454545454546	86.59176029962546	36	0.9166666666666666	81.70829975825947	21	0.9047619047619048	methylated (>=50%)	O42227	Probable histone deacetylase 1-B (HD1-B) (EC 3.5.1.98) (Protein deacetylase HDAC1-B) (EC 3.5.1.-) (Protein decrotonylase HDAC1-B) (EC 3.5.1.-) (RPD3 homolog)	heterochromatin formation [GO:0031507]	hit with GO BP
GN012417	Chromosome_5A	12619	4	172	34.654093034313334	0.4542704775299712	74.23160173160173	169	0.8402366863905325	35.52397868561279	15	0.3333333333333333	76.743113979486	154	0.8896103896103896	73.00712896953986	61	0.7377049180327869	methylated (>=50%)	Q7ZUX6	Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)	peptidyl-hypusine biosynthetic process [GO:0008612]	hit with GO BP
GN012418	Chromosome_5A	21853	8	285	35.2400128128861	0.42018070704129495	84.39451450961185	274	0.9452554744525548	89.0685142417244	24	1	83.99068839374792	250	0.94	85.74445617740233	21	0.9523809523809523	methylated (>=50%)	Q96LT7	Guanine nucleotide exchange factor C9orf72	autophagosome-lysosome fusion [GO:0061909]; autophagy [GO:0006914]; axon extension [GO:0048675]; endocytosis [GO:0006897]; late endosome to lysosome transport [GO:1902774]; negative regulation of exocytosis [GO:0045920]; negative regulation of immune response [GO:0050777]; negative regulation of protein phosphorylation [GO:0001933]; positive regulation of macroautophagy [GO:0016239]; regulation of actin filament organization [GO:0110053]; regulation of autophagosome assembly [GO:2000785]; regulation of autophagy [GO:0010506]; regulation of protein localization [GO:0032880]; regulation of synaptic vesicle cycle [GO:0098693]; regulation of TORC1 signaling [GO:1903432]; stress granule assembly [GO:0034063]	hit with GO BP
GN012427	Chromosome_5A	4659	5	51	34.62116333977249	0.3661821409747843	85.5613425925926	51	0.9215686274509803	71.48114075436983	19	0.7894736842105263	92.02195018995357	32	1	53.25884543761639	58	0.6206896551724138	methylated (>=50%)	Q8CFD5	DNA excision repair protein ERCC-8 (Cockayne syndrome WD repeat protein CSA homolog)	DNA damage response [GO:0006974]; double-strand break repair via classical nonhomologous end joining [GO:0097680]; positive regulation of DNA repair [GO:0045739]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of transcription-coupled nucleotide-excision repair [GO:0090262]; response to auditory stimulus [GO:0010996]; response to oxidative stress [GO:0006979]; response to UV [GO:0009411]; response to X-ray [GO:0010165]; single strand break repair [GO:0000012]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN012426	Chromosome_5A	7224	7	72	35.548172757475086	0.3180821917808219	85.41864890580399	72	0.9861111111111112	89.57968476357269	21	1	83.86675375571522	51	0.9803921568627451	91.32569558101473	9	1	methylated (>=50%)	Q92521	GPI alpha-1,2-mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Phosphatidylinositol-glycan biosynthesis class B protein) (PIG-B)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN012425	Chromosome_5A	33174	19	419	35.00030144088744	0.4126980139946546	83.69685313254492	408	0.9632352941176471	85.62130177514793	34	0.9411764705882353	83.5538752362949	374	0.9652406417112299	24.19236417033774	46	0.2391304347826087	methylated (>=50%)	O89000	Dihydropyrimidine dehydrogenase [NADP(+)] (DHPDHase) (DPD) (EC 1.3.1.2) (Dihydrothymine dehydrogenase) (Dihydrouracil dehydrogenase)	beta-alanine biosynthetic process [GO:0019483]; circadian rhythm [GO:0007623]; CMP catabolic process [GO:0006248]; dCMP catabolic process [GO:0006249]; dUMP catabolic process [GO:0046079]; purine nucleobase catabolic process [GO:0006145]; pyrimidine nucleobase catabolic process [GO:0006208]; response to glucocorticoid [GO:0051384]; response to nutrient [GO:0007584]; response to xenobiotic stimulus [GO:0009410]; thymidine catabolic process [GO:0006214]; thymine catabolic process [GO:0006210]; TMP catabolic process [GO:0046045]; UMP catabolic process [GO:0046050]; uracil catabolic process [GO:0006212]; uracil metabolic process [GO:0019860]; xenobiotic catabolic process [GO:0042178]	hit with GO BP
GN012424	Chromosome_5A	201	1	14	58.70646766169154	0.8086206896551724	0.46296296296296297	14	0	0.46296296296296297	14	0	NA	NA	NA	0.6202008269344359	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012423	Chromosome_5A	404	2	10	38.366336633663366	0.6760374832663989	0.43010752688172044	10	0	0.2849002849002849	8	0	0.8771929824561403	2	0	0.7249295207410391	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012422	Chromosome_5A	12024	8	212	34.830339321357286	0.5813846558066211	90.6283280085197	198	1	93.20652173913044	26	1	90.2409146590445	172	1	90.99009900990099	25	1	methylated (>=50%)	Q08BD8	Mitochondrial fission regulator 2	aerobic respiration [GO:0009060]; mitochondrial fission [GO:0000266]	hit with GO BP
GN012420	Chromosome_5A	31760	23	624	35.40931989924433	0.6270667631966956	37.520507882159926	558	0.3996415770609319	78.38394235717962	31	0.8387096774193549	34.477869323625214	527	0.3738140417457306	2.4343977236800507	66	0	sparse (10-50%)	Q96DM3	Regulator of MON1-CCZ1 complex (Colon cancer-associated protein Mic1) (Mic-1) (WD repeat-containing protein 98)	regulation of autophagy [GO:0010506]	hit with GO BP
GN012419	Chromosome_5A	36125	15	867	33.63044982698962	0.8509111486608743	2.8669810614566957	750	0.0013333333333333333	2.3545706371191137	86	0	2.917706419502564	664	0.0015060240963855422	0.9633197480548351	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012433	Chromosome_5A	19534	15	172	33.454489607863216	0.3160945504151281	87.13188220230474	80	0.9625	96.15384615384616	7	1	86.31284916201118	73	0.958904109589041	NA	NA	NA	methylated (>=50%)	Q9UHY1	Nuclear receptor-binding protein	DNA damage response [GO:0006974]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; epithelial cell differentiation [GO:0030855]; epithelial cell proliferation [GO:0050673]; in utero embryonic development [GO:0001701]; intracellular signal transduction [GO:0035556]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; regulation of monoatomic cation transmembrane transport [GO:1904062]	hit with GO BP
GN012434	Chromosome_5A	1245	2	52	39.678714859437754	1.070436507936508	NA	0	NA	NA	NA	NA	NA	NA	NA	0	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012435	Chromosome_5A	27757	15	351	33.18802464243254	0.4593407557073379	66.85730626251072	163	0.7423312883435583	14.420062695924765	7	0.14285714285714285	68.50176956350766	156	0.7692307692307693	0.3429878048780488	38	0	methylated (>=50%)	Q9UNH5	Dual specificity protein phosphatase CDC14A (EC 3.1.3.16) (EC 3.1.3.48) (CDC14 cell division cycle 14 homolog A)	cilium assembly [GO:0060271]; microtubule cytoskeleton organization [GO:0000226]; positive regulation of cytokinesis [GO:0032467]; regulation of exit from mitosis [GO:0007096]; sensory perception of sound [GO:0007605]	hit with GO BP
GN012436	Chromosome_5A	5119	7	50	31.978902129322133	0.38458648876066837	56.872037914691944	49	0.7346938775510204	15.2276295133438	9	0.2222222222222222	68.32110487699612	40	0.85	0.8036739380022963	38	0	methylated (>=50%)	Q7RTV5	Peroxiredoxin-like 2C (AhpC/TSA antioxidant enzyme domain-containing protein 1) (Thioredoxin-like protein AAED1)	positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of glycolytic process [GO:0045821]	hit with GO BP
GN012438	Chromosome_5A	360	1	10	41.111111111111114	0.6722689075630253	0.9578544061302682	10	0	0.9578544061302682	10	0	NA	NA	NA	4.104699583581201	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012442	Chromosome_5A	7884	5	68	35.083713850837135	0.28282990280280745	92.20868765800965	66	0.9848484848484849	93.26500732064422	10	1	92.01199563794984	56	0.9821428571428571	94.88299531981279	47	1	methylated (>=50%)	Q15906	Vacuolar protein sorting-associated protein 72 homolog (Protein YL-1) (Transcription factor-like 1)	chromatin remodeling [GO:0006338]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair [GO:2000779]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN019097	Chromosome_5A	763	1	20	46.65792922673656	0.49385113268608416	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4598540145985401	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012444	Chromosome_5A	1146	1	60	42.84467713787085	1.1414342629482073	0.5434782608695652	60	0	0.5434782608695652	60	0	NA	NA	NA	0.2628120893561104	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012445	Chromosome_5A	19874	17	489	34.91999597464023	0.8071470288069781	1.342989734214597	489	0	1.1106540518305223	110	0	1.3908913578152828	379	0	0.7698541329011345	53	0	unmethylated (<10%)	Q9VEN1	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Filamin-1) (Filamin1)	actin crosslink formation [GO:0051764]; behavioral response to ethanol [GO:0048149]; determination of adult lifespan [GO:0008340]; female germline ring canal formation [GO:0007301]; female germline ring canal formation, actin assembly [GO:0008302]; germarium-derived female germ-line cyst encapsulation [GO:0030708]; germline ring canal formation [GO:0030725]; intracellular protein localization [GO:0008104]; long-term memory [GO:0007616]; mitotic cell cycle [GO:0000278]; motor neuron axon guidance [GO:0008045]; negative regulation of lamellocyte differentiation [GO:0035204]; positive regulation of cytoskeleton organization [GO:0051495]; sarcomere organization [GO:0045214]; syncytial embryo cellularization [GO:0110069]	hit with GO BP
GN012446	Chromosome_5A	1411	2	49	37.42026931254429	1.0118840282757915	0.6856023506366308	49	0	0.7614213197969543	27	0	0.5489478499542544	22	0	38.530066815144764	17	0.4117647058823529	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012447	Chromosome_5A	3386	6	24	34.02244536326049	0.24630903199798743	76.39000805801773	24	0.9166666666666666	80	7	1	74.60890493381469	17	0.8823529411764706	86.39308855291577	17	1	methylated (>=50%)	O70496	H(+)/Cl(-) exchange transporter 7 (Chloride channel 7 alpha subunit) (Chloride channel protein 7) (ClC-7)	chloride transmembrane transport [GO:1902476]; response to pH [GO:0009268]; transepithelial chloride transport [GO:0030321]	hit with GO BP
GN012448	Chromosome_5A	16836	17	182	34.4143502019482	0.3669027947410015	84.65759961822954	181	0.9502762430939227	85.20302821748108	23	0.9565217391304348	84.5863309352518	158	0.9493670886075949	46.3382737576286	42	0.5	methylated (>=50%)	O70496	H(+)/Cl(-) exchange transporter 7 (Chloride channel 7 alpha subunit) (Chloride channel protein 7) (ClC-7)	chloride transmembrane transport [GO:1902476]; response to pH [GO:0009268]; transepithelial chloride transport [GO:0030321]	hit with GO BP
GN012449	Chromosome_5A	23855	18	306	34.73485642422972	0.4273267658271124	87.58023433520123	301	0.9534883720930233	65.35500427715996	26	0.8461538461538461	88.98759547153459	275	0.9636363636363636	38.21076573161486	23	0.30434782608695654	methylated (>=50%)	Q9CZT4	DNA-directed RNA polymerase III subunit RPC5 (RNA polymerase III subunit 5) (RNA polymerase III subunit C5) (Sex-lethal interactor homolog) (Sxl interactor)	termination of RNA polymerase III transcription [GO:0006386]; transcription by RNA polymerase III [GO:0006383]; transcription initiation at RNA polymerase III promoter [GO:0006384]	hit with GO BP
GN012450	Chromosome_5A	1170	1	51	45.12820512820513	0.8561589784059115	1.137123745819398	51	0	1.137123745819398	51	0	NA	NA	NA	0.6942148760330579	72	0	unmethylated (<10%)	O75382	Tripartite motif-containing protein 3 (EC 2.3.2.27) (Brain-expressed RING finger protein) (RING finger protein 22) (RING finger protein 97)	nervous system development [GO:0007399]; neural precursor cell proliferation [GO:0061351]; positive regulation of toll-like receptor 3 signaling pathway [GO:0034141]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN012451	Chromosome_5A	19655	9	113	35.33452047824981	0.18419956581942626	73.25209444021326	112	0.875	63.687943262411345	11	0.6363636363636364	74.40273037542661	101	0.900990099009901	0.5401512423478574	57	0	methylated (>=50%)	Q8NE00	Putative sodium-coupled neutral amino acid transporter 12 (Solute carrier family 38 member 12)	NA	hit, no GO BP
GN012452	Chromosome_5A	3875	3	37	35.12258064516129	0.31651507792838535	88.86433937251437	37	0.972972972972973	89.289805269186715	28	1	87.4274661508704	9	0.8888888888888888	16.666666666666668	35	0.14285714285714285	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012453	Chromosome_5A	933	2	15	36.01286173633441	0.4962941948296039	24.05247813411079	15	0.2	4.74040632054176	11	0	59.25925925925926	4	0.75	29.37204591492235	25	0.28	sparse (10-50%)	Q95108	Thioredoxin, mitochondrial (MTRX) (Mt-Trx) (Thioredoxin-2)	NA	hit, no GO BP
GN012454	Chromosome_5A	25336	18	328	34.68582254499526	0.43087570780970413	86.65044247787611	324	0.9506172839506173	93.50541215653622	39	0.9743589743589743	85.83523121101099	285	0.9473684210526315	0.6058673469387755	53	0	methylated (>=50%)	Q5ZKV8	Kinesin-like protein KIF2A	microtubule-based movement [GO:0007018]; mitotic spindle organization [GO:0007052]	hit with GO BP
GN012455	Chromosome_5A	4974	3	47	34.92159227985525	0.31282181662473907	85.2035203520352	47	0.9574468085106383	84.40366972477064	16	0.9375	85.54595443833465	31	0.967741935483871	87.29351969504447	17	1	methylated (>=50%)	O16327	Protein irg-1 (Infection response protein 1)	antibacterial innate immune response [GO:0140367]; defense response to Gram-negative bacterium [GO:0050829]; innate immune response [GO:0045087]	hit with GO BP
GN012456	Chromosome_5A	1146	4	37	36.038394415357764	0.9948383463938811	0.5962059620596206	37	0	0.8873114463176575	27	0	0.1392757660167131	10	0	0.4833512352309345	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012457	Chromosome_5A	13831	9	360	38.767984961318774	0.6942125945553675	0.7414151925078044	359	0	0.6960556844547564	49	0	0.7488087134104833	310	0	0.7847533632286996	81	0	unmethylated (<10%)	Q92035	Acetylcholinesterase (BfAChE) (EC 3.1.1.7)	acetylcholine catabolic process in synaptic cleft [GO:0001507]; choline metabolic process [GO:0019695]	hit with GO BP
GN012458	Chromosome_5A	1905	1	83	46.14173228346457	0.8192317257673416	0	7	0	0	7	0	NA	NA	NA	1.4894709809964046	43	0	unmethylated (<10%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN012459	Chromosome_5A	1904	1	82	45.955882352941174	0.8162531237910013	0	3	0	0	3	0	NA	NA	NA	0.7801743919229004	37	0	NA	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN012460	Chromosome_5A	1905	1	82	46.08923884514436	0.811375146084924	0.4728132387706856	13	0	0.4728132387706856	13	0	NA	NA	NA	0.5157962604771116	42	0	unmethylated (<10%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN012461	Chromosome_5A	3946	4	30	31.804358844399392	0.3009043907944303	67.16072255673923	30	0.7333333333333333	32.035928143712574	6	0.3333333333333333	73.58904109589041	24	0.8333333333333334	57.29356129501637	49	0.4897959183673469	methylated (>=50%)	Q9Y547	Intraflagellar transport protein 25 homolog (Heat shock protein beta-11) (Hspb11) (Heat shock protein family B member 11) (Placental protein 25) (PP25)	cilium assembly [GO:0060271]; intraciliary anterograde transport [GO:0035720]; kidney development [GO:0001822]; smoothened signaling pathway [GO:0007224]; spermatogenesis [GO:0007283]	hit with GO BP
GN012462	Chromosome_5A	798	1	10	43.984962406015036	0.26828940290478753	73.15436241610739	10	1	73.15436241610739	10	1	NA	NA	NA	6.704304869442484	31	0.06451612903225806	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012464	Chromosome_5A	591	1	21	44.67005076142132	0.7124569460390356	59.02439024390244	12	0.9166666666666666	59.02439024390244	12	0.9166666666666666	NA	NA	NA	65.2530779753762	25	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012465	Chromosome_5A	456	1	5	38.81578947368421	0.2980392156862745	20.610687022900763	5	0	20.610687022900763	5	0	NA	NA	NA	11.554109031733116	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012477	Chromosome_5A	2214	3	59	38.97922312556459	0.7042212518195051	2.0993136859103756	59	0	1.7128874388254487	37	0	2.478017585931255	22	0	0.4557291666666667	50	0	unmethylated (<10%)	Q7K237	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 (EC 2.4.1.122) (Core 1 O-glycan T-synthase) (Core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1) (Core 1 beta1,3-galactosyltransferase 1) (C1GalT1) (Core 1 beta3-Gal-T1)	central nervous system morphogenesis [GO:0021551]; glycolipid biosynthetic process [GO:0009247]; muscle cell development [GO:0055001]; negative regulation of hematopoietic stem cell differentiation [GO:1902037]; neuromuscular junction development [GO:0007528]; protein O-linked glycosylation via N-acetyl-galactosamine [GO:0016266]; regulation of filopodium assembly [GO:0051489]	hit with GO BP
GN012476	Chromosome_5A	17497	19	198	34.177287535006	0.3888147601207654	87.48976893533967	198	0.9848484848484849	90.06359300476947	22	0.9545454545454546	87.26837606837607	176	0.9886363636363636	79.66903073286052	8	1	methylated (>=50%)	Q5ZJB4	Inhibitor of nuclear factor kappa-B kinase subunit alpha (I kappa-B kinase alpha) (IKK-A) (IKK-alpha) (IkBKA) (IkappaB kinase) (EC 2.7.11.10) (Conserved helix-loop-helix ubiquitous kinase) (Nuclear factor NF-kappa-B inhibitor kinase alpha) (NFKBIKA)	cellular response to tumor necrosis factor [GO:0071356]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of transcription by RNA polymerase II [GO:0045944]; toll-like receptor signaling pathway [GO:0002224]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN012475	Chromosome_5A	24024	20	325	34.74025974025974	0.448578530371291	88.65736190288972	318	0.9779874213836478	94.48315911730546	29	1	88.11875872436379	289	0.9757785467128027	93.0937675463223	30	1	methylated (>=50%)	Q5ZJB4	Inhibitor of nuclear factor kappa-B kinase subunit alpha (I kappa-B kinase alpha) (IKK-A) (IKK-alpha) (IkBKA) (IkappaB kinase) (EC 2.7.11.10) (Conserved helix-loop-helix ubiquitous kinase) (Nuclear factor NF-kappa-B inhibitor kinase alpha) (NFKBIKA)	cellular response to tumor necrosis factor [GO:0071356]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of transcription by RNA polymerase II [GO:0045944]; toll-like receptor signaling pathway [GO:0002224]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN012474	Chromosome_5A	927	1	10	40.99244875943905	0.25724275724275725	65.9090909090909	10	0.7	65.9090909090909	10	0.7	NA	NA	NA	54.05111473626971	32	0.375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012473	Chromosome_5A	17544	20	197	34.4391244870041	0.38156827758449435	85.04475183075671	196	0.9540816326530612	91.35021097046413	28	1	84.21972764078028	168	0.9464285714285714	54.48717948717949	10	0.7	methylated (>=50%)	O75460	Serine/threonine-protein kinase/endoribonuclease IRE1 (Endoplasmic reticulum-to-nucleus signaling 1) (Inositol-requiring protein 1) (hIRE1p) (Ire1-alpha) (IRE1a) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)]	cellular response to glucose stimulus [GO:0071333]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to unfolded protein [GO:0034620]; cellular response to vascular endothelial growth factor stimulus [GO:0035924]; endoplasmic reticulum unfolded protein response [GO:0030968]; endothelial cell proliferation [GO:0001935]; insulin metabolic process [GO:1901142]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; IRE1-mediated unfolded protein response [GO:0036498]; mRNA catabolic process [GO:0006402]; mRNA splicing, via endonucleolytic cleavage and ligation [GO:0070054]; positive regulation of endoplasmic reticulum unfolded protein response [GO:1900103]; positive regulation of JNK cascade [GO:0046330]; positive regulation of RNA splicing [GO:0033120]; positive regulation of vascular associated smooth muscle cell proliferation [GO:1904707]; protein phosphorylation [GO:0006468]; regulation of macroautophagy [GO:0016241]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN012472	Chromosome_5A	486	1	14	43.62139917695473	0.6134150739271547	97.42857142857143	14	1	97.42857142857143	14	1	NA	NA	NA	90.46520569011919	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012471	Chromosome_5A	12210	8	166	36.21621621621622	0.4151196741402927	85.03743205825043	166	0.9819277108433735	85.28842431281456	49	0.9591836734693877	84.94698660714286	117	0.9914529914529915	37.15596330275229	10	0.4	methylated (>=50%)	Q6ZPJ0	Testis-expressed protein 2	NA	hit, no GO BP
GN012470	Chromosome_5A	8131	8	94	31.85340056573607	0.456871750086226	76.91771269177127	94	0.8936170212765957	61.29385964912281	13	0.6923076923076923	79.19463087248322	81	0.9259259259259259	56.09962009286619	28	0.5714285714285714	methylated (>=50%)	Q2L6K8	Protein canopy 4	NA	hit, no GO BP
GN012469	Chromosome_5A	3873	5	56	35.243996901626645	0.46994687074770974	84.49563145353456	56	0.9107142857142857	71.23745819397993	5	0.8	85.15677118078719	51	0.9215686274509803	28.95771878072763	27	0.37037037037037035	methylated (>=50%)	Q92747	Actin-related protein 2/3 complex subunit 1A (SOP2-like protein)	actin cytoskeleton organization [GO:0030036]; Arp2/3 complex-mediated actin nucleation [GO:0034314]; cortical actin cytoskeleton organization [GO:0030866]	hit with GO BP
GN012478	Chromosome_5A	1317	1	13	39.33181473044799	0.2635419071807897	79.31623931623932	13	1	79.31623931623932	13	1	NA	NA	NA	90.70450097847358	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012479	Chromosome_5A	666	1	12	41.891891891891895	0.4327485380116959	20.77922077922078	11	0.2727272727272727	20.77922077922078	11	0.2727272727272727	NA	NA	NA	47.88898730439917	46	0.4782608695652174	sparse (10-50%)	Q9VVI9	Charged multivesicular body protein 5 (Vacuolar protein-sorting-associated protein 60)	endosome transport via multivesicular body sorting pathway [GO:0032509]; late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; membrane fission [GO:0090148]; multivesicular body assembly [GO:0036258]; nuclear membrane reassembly [GO:0031468]; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN012480	Chromosome_5A	5083	5	51	32.9923273657289	0.3691063694067997	87.99531066822978	50	1	94.10029498525074	9	1	86.84137161973794	41	1	85.47008547008546	26	0.9615384615384616	methylated (>=50%)	C3Z724	Ubiquitin-conjugating enzyme E2 S (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme S) (Ubiquitin carrier protein S) (Ubiquitin-protein ligase S)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; exit from mitosis [GO:0010458]; free ubiquitin chain polymerization [GO:0010994]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein K11-linked ubiquitination [GO:0070979]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN012481	Chromosome_5A	12142	4	205	35.488387415582274	0.5366672646142118	79.31093442763101	205	0.9073170731707317	55.839416058394164	6	0.3333333333333333	79.8739385450407	199	0.9246231155778895	0.651840490797546	38	0	methylated (>=50%)	P52505	Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)	[2Fe-2S] cluster assembly [GO:0044571]; fatty acid biosynthetic process [GO:0006633]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	hit with GO BP
GN012482	Chromosome_5A	17992	11	193	36.64962205424633	0.3196352218637128	89.63277541843617	140	0.9714285714285714	93.00873907615481	45	1	88.18490094592183	95	0.9578947368421052	85.86572438162544	10	1	methylated (>=50%)	Q96Q04	Serine/threonine-protein kinase LMTK3 (EC 2.7.11.1) (Lemur tyrosine kinase 3)	NA	hit, no GO BP
GN012483	Chromosome_5A	8504	16	82	34.183913452492945	0.33159356335831397	92.18773656320968	81	1	95.84158415841584	34	1	90.57797164667393	47	1	0.7235338918507236	61	0	methylated (>=50%)	B1AQJ2	Ubiquitin carboxyl-terminal hydrolase 36 (EC 2.3.2.-) (EC 3.4.19.12) (Deubiquitinating enzyme 36) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36)	chromatin organization [GO:0006325]; negative regulation of macroautophagy [GO:0016242]; nucleolus organization [GO:0007000]; protein deubiquitination [GO:0016579]; protein stabilization [GO:0050821]; regulation of apoptotic process [GO:0042981]; regulation of protein stability [GO:0031647]; regulation of rRNA processing [GO:2000232]	hit with GO BP
GN012484	Chromosome_5A	541	2	22	37.33826247689464	1.1741146295748248	0.30165912518853694	22	0	0.30165912518853694	22	0	NA	NA	NA	0.43327556325823224	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012485	Chromosome_5A	2922	1	19	39.28815879534565	0.33230979187990445	4.245283018867925	14	0	4.245283018867925	14	0	NA	NA	NA	8.108108108108109	3	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012486	Chromosome_5A	11318	21	308	36.79978794840078	0.8054280158518913	0.5432840088641075	308	0	0.535623193334467	264	0	0.5837449483610238	44	0	0.8157715839564922	68	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN012487	Chromosome_5A	4264	9	125	37.94559099437148	0.8148837835069357	0.6117247238742566	125	0	0.6569942513003011	82	0	0.5376344086021505	43	0	0.6594932315168345	47	0	unmethylated (<10%)	Q7Z442	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN012488	Chromosome_5A	12712	15	354	37.09093769666457	0.8109562261311096	0.746268656716418	354	0	0.5749235474006116	222	0	0.9512659154105079	132	0	0.7800891530460624	47	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN012489	Chromosome_5A	423	1	17	40.8983451536643	0.9683544303797469	88.32844574780059	17	1	88.32844574780059	17	1	NA	NA	NA	88.38912133891213	24	0.9583333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012490	Chromosome_5A	2177	3	16	32.56775378961874	0.2795191551511066	71.26984126984127	16	0.9375	87.30650154798762	5	1	65.74172892209178	11	0.9090909090909091	89.04937856902923	61	0.9836065573770492	methylated (>=50%)	Q9Y2V2	Calcium-regulated heat-stable protein 1 (Calcium-regulated heat-stable protein of 24 kDa) (CRHSP-24)	intracellular signal transduction [GO:0035556]; regulation of mRNA stability [GO:0043488]	hit with GO BP
GN012491	Chromosome_5A	1431	1	50	39.552760307477286	0.8955728286583305	44.935344827586206	50	0.3	44.935344827586206	50	0.3	NA	NA	NA	6.850715746421268	51	0.0784313725490196	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012492	Chromosome_5A	13129	13	223	33.90966562571407	0.5922305627022427	77.74052278636924	221	0.8280542986425339	75.5248950209958	30	0.8	78.02579748204217	191	0.8324607329842932	0.7862407862407862	62	0	methylated (>=50%)	Q28DV3	Histone deacetylase 3 (HD3) (EC 3.5.1.98) (Protein deacetylase HDAC3) (EC 3.5.1.-) (Protein deacylase HDAC3) (EC 3.5.1.-)	circadian regulation of gene expression [GO:0032922]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of circadian rhythm [GO:0042752]	hit with GO BP
GN012493	Chromosome_5A	1920	5	69	41.614583333333336	0.8300751879699249	0.24860161591050342	69	0	0.33783783783783783	38	0	0.13869625520110956	31	0	0.7915567282321899	67	0	unmethylated (<10%)	Q7JR71	Extracellular superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	nitric oxide metabolic process [GO:0046209]; removal of superoxide radicals [GO:0019430]; response to oxidative stress [GO:0006979]; UV protection [GO:0009650]	hit with GO BP
GN012494	Chromosome_5A	846	2	18	34.988179669030735	0.70565338276181655	59.28317726832419	18	0.8333333333333334	59.50583390528483	11	0.8181818181818182	59.08536585365854	7	0.8571428571428571	84.96395468589084	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012495	Chromosome_5A	6466	7	66	34.364367460562946	0.3459612480209349	72.87106860400957	66	0.9696969696969697	78.7321063394683	12	0.9166666666666666	72.29183508488278	54	0.9814814814814815	77.2883295194508	25	0.88	methylated (>=50%)	Q91W43	Glycine dehydrogenase (decarboxylating), mitochondrial (EC 1.4.4.2) (Glycine cleavage system P protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))	cellular response to leukemia inhibitory factor [GO:1990830]; glycine catabolic process [GO:0006546]; glycine decarboxylation via glycine cleavage system [GO:0019464]; protein-containing complex assembly [GO:0065003]; response to lipoic acid [GO:1903442]; response to methylamine [GO:0036255]	hit with GO BP
GN012496	Chromosome_5A	6154	13	46	36.28534286642834	0.22842950078353083	82.20091704877032	46	0.9130434782608695	86.03839441535777	23	1	78.69114126097367	23	0.8260869565217391	75.52521008403362	16	0.875	methylated (>=50%)	P15505	Glycine dehydrogenase (decarboxylating), mitochondrial (EC 1.4.4.2) (Glycine cleavage system P protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))	glycine catabolic process [GO:0006546]; glycine decarboxylation via glycine cleavage system [GO:0019464]; response to lipoic acid [GO:1903442]; response to methylamine [GO:0036255]	hit with GO BP
GN012497	Chromosome_5A	999	2	29	44.24424424424424	0.5937653713723561	0.6764374295377678	28	0	0.9416195856873822	23	0	0.2808988764044944	5	0	25.315515961395693	34	0.14705882352941177	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012498	Chromosome_5A	13069	8	164	34.62391919810238	0.4187677188046462	87.71537970644543	164	0.9939024390243902	91.77972865123704	21	1	87.2640255251263	143	0.993006993006993	89.03785488958991	14	1	methylated (>=50%)	Q9MZD1	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Membrane glycoprotein SP55) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	monoatomic anion transport [GO:0006820]	hit with GO BP
GN012499	Chromosome_5A	25544	11	368	35.378170999060444	0.46142456525121844	83.03567728836033	365	0.9397260273972603	68.5522531160115	32	0.75	84.40604163831814	333	0.9579579579579579	43.541666666666664	28	0.4642857142857143	methylated (>=50%)	Q8BJW7	Structure-specific endonuclease subunit EME1	double-strand break repair [GO:0006302]; mitotic intra-S DNA damage checkpoint signaling [GO:0031573]; replication fork processing [GO:0031297]; resolution of meiotic recombination intermediates [GO:0000712]; resolution of mitotic recombination intermediates [GO:0071140]; response to intra-S DNA damage checkpoint signaling [GO:0072429]	hit with GO BP
GN012500	Chromosome_5A	13417	3	214	33.7780427815458	0.5608565881024655	86.49606299212599	212	0.9622641509433962	91.88034188034187	5	1	86.39499438472646	207	0.961352657004831	67.60886172650879	52	0.6153846153846154	methylated (>=50%)	Q32PC3	Large ribosomal subunit protein bL27m (39S ribosomal protein L27, mitochondrial) (L27mt) (MRP-L27)	translation [GO:0006412]	hit with GO BP
GN012501	Chromosome_5A	1990	4	27	33.5678391959799	0.48164150740435296	89.46635730858469	27	1	88.94117647058823	6	1	89.59537572254335	21	1	93.13524590163935	17	1	methylated (>=50%)	Q5ZMU0	Small ribosomal subunit protein uS7m (28S ribosomal protein S7, mitochondrial) (MRP-S7) (S7mt)	mitochondrial translation [GO:0032543]; translation [GO:0006412]	hit with GO BP
GN012502	Chromosome_5A	2301	4	48	35.419382877009994	0.6652051362355151	70.86021505376344	48	0.7083333333333334	50	17	0.47058823529411764	80.3125	31	0.8387096774193549	27.992957746478872	43	0.4883720930232558	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012503	Chromosome_5A	39126	31	853	33.844502376936056	0.7621616003803309	13.97917795929048	844	0.04265402843601896	12.516941720481544	229	0.043668122270742356	14.426973973338542	615	0.04227642276422764	0.7612066535100085	62	0	sparse (10-50%)	Q3LHL9	Protein winged eye	imaginal disc morphogenesis [GO:0007560]; positive regulation of heterochromatin formation [GO:0031453]; regulation of gene expression [GO:0010468]; transposable element silencing by heterochromatin formation [GO:0141005]	hit with GO BP
GN012504	Chromosome_5A	28762	20	279	33.16528753216049	0.3552510057095349	60.3458527400654	277	0.7111913357400722	79.0574060949681	62	0.9032258064516129	57.30414746543779	215	0.6558139534883721	0.5599626691553896	66	0	methylated (>=50%)	Q7ZXX2	Kinesin-like protein KIF19	axonemal microtubule depolymerization [GO:0060404]; microtubule-based movement [GO:0007018]; plus-end specific microtubule depolymerization [GO:0070462]	hit with GO BP
GN012505	Chromosome_5A	1326	1	67	44.042232277526395	1.0447206575806394	0.665083135391924	67	0	0.665083135391924	67	0	NA	NA	NA	10.630803714377201	57	0.07017543859649122	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012506	Chromosome_5A	24800	18	255	35.145161290322584	0.3348647766363511	92.10493205837946	253	0.9841897233201581	94.77396601474831	65	1	91.45339281521484	188	0.9787234042553191	91.14681789540013	40	1	methylated (>=50%)	P97868	E3 ubiquitin-protein ligase RBBP6 (EC 2.3.2.27) (Proliferation potential-related protein) (Protein P2P-R) (RING-type E3 ubiquitin transferase RBBP6) (Retinoblastoma-binding protein 6) (p53-associated cellular protein of testis)	DNA damage response [GO:0006974]; embryonic organ development [GO:0048568]; in utero embryonic development [GO:0001701]; mRNA processing [GO:0006397]; multicellular organism growth [GO:0035264]; protein ubiquitination [GO:0016567]; regulation of DNA replication [GO:0006275]; somite development [GO:0061053]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012507	Chromosome_5A	312	1	13	47.756410256410255	0.7334538878842677	0.4862236628849271	13	0	0.4862236628849271	13	0	NA	NA	NA	32.38070267435763	66	0.36363636363636365	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012508	Chromosome_5A	37284	32	576	33.944855702177875	0.5380856567979304	39.23315647211933	546	0.4065934065934066	58.15395840933966	50	0.66	37.32828913538529	496	0.3810483870967742	1.7989720159908624	61	0	sparse (10-50%)	Q9VKJ9	Coiled-coil and C2 domain-containing protein 1-like (Lethal (2) giant discs 1 protein)	compound eye development [GO:0048749]; endosomal transport [GO:0016197]; endosome transport via multivesicular body sorting pathway [GO:0032509]; female germ-line stem cell asymmetric division [GO:0048132]; imaginal disc-derived wing vein morphogenesis [GO:0008586]; intracellular protein transport [GO:0006886]; mitotic cytokinesis [GO:0000281]; negative regulation of Notch signaling pathway [GO:0045746]; positive regulation of intralumenal vesicle formation [GO:1905367]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory organ development [GO:0007423]; sensory organ precursor cell division [GO:0045035]; wing disc morphogenesis [GO:0007472]	hit with GO BP
GN012509	Chromosome_5A	2591	8	56	34.19529139328445	0.7394820934392726	0.6014644351464435	56	0	0.6278026905829597	19	0	0.5906238464378	37	0	14.85284052019165	41	0.14634146341463414	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012510	Chromosome_5A	7283	13	56	34.5324728820541	0.2613214208368734	82.11772232885477	56	0.9285714285714286	85.31468531468532	19	0.9473684210526315	80.61176470588235	37	0.918918918918919	0.3448275862068966	49	0	methylated (>=50%)	Q9H3U5	Lysosomal dipeptide transporter MFSD1 (Major facilitator superfamily domain-containing protein 1) (Smooth muscle cell-associated protein 4) (SMAP-4)	dipeptide transmembrane transport from lysosomal lumen to cytosol [GO:0141204]; protein localization to lysosome [GO:0061462]; protein stabilization [GO:0050821]	hit with GO BP
GN012511	Chromosome_5A	2980	2	86	35.97315436241611	0.8924175154522503	0.41382667964946446	86	0	0.43440486533449174	34	0	0.4058167061210686	52	0	0.5849853753656159	50	0	unmethylated (<10%)	A2VDD2	Dynein light chain Tctex-type 5-B (Tctex1 domain-containing protein 1-B)	microtubule-based movement [GO:0007018]	hit with GO BP
GN012060	Chromosome_5A	4205	8	45	35.07728894173603	0.3492885938745976	30.52863436123348	45	0.3111111111111111	45.15659140568099	31	0.41935483870967744	8.138238573021182	14	0.07142857142857142	40.241026984542835	50	0.3	sparse (10-50%)	O08605	MAP kinase-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (MAP kinase signal-integrating kinase 1) (MAPK signal-integrating kinase 1) (Mnk1)	extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; protein phosphorylation [GO:0006468]; regulation of translational initiation [GO:0006446]; response to salt stress [GO:0009651]	hit with GO BP
GN012518	Chromosome_5A	493	2	13	39.95943204868154	0.6614035087719298	94.62025316455696	8	1	94.33198380566802	6	1	95.65217391304348	2	1	93.07359307359307	63	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012517	Chromosome_5A	5628	10	46	35.32338308457712	0.26240634426389026	88.69565217391305	46	0.9565217391304348	91.46029035012809	20	1	87.11566617862371	26	0.9230769230769231	85.19553072625699	22	1	methylated (>=50%)	Q8IWX8	Calcium homeostasis endoplasmic reticulum protein (ERPROT 213-21) (SR-related CTD-associated factor 6)	intracellular calcium ion homeostasis [GO:0006874]; negative regulation of cell population proliferation [GO:0008285]; nervous system development [GO:0007399]; positive regulation of calcineurin-NFAT signaling cascade [GO:0070886]; release of sequestered calcium ion into cytosol [GO:0051209]; RNA processing [GO:0006396]	hit with GO BP
GN012516	Chromosome_5A	5156	7	56	37.02482544608223	0.31735856937162704	74.74549725920126	56	0.8035714285714286	86.0122699386503	23	1	69.4652098907418	33	0.6666666666666666	55.65410199556541	41	0.5609756097560976	methylated (>=50%)	Q15750	TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (Mitogen-activated protein kinase kinase kinase 7-interacting protein 1) (TGF-beta-activated kinase 1-binding protein 1) (TAK1-binding protein 1)	canonical NF-kappaB signal transduction [GO:0007249]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of cGAS/STING signaling pathway [GO:0141111]; regulation of MAPK cascade [GO:0043408]	hit with GO BP
GN012515	Chromosome_5A	7558	13	223	37.45699920613919	0.8415035518781917	0.47631419416298604	222	0	0.4033970276008493	90	0	0.5265467310223783	132	0	0.8820646847435478	47	0	unmethylated (<10%)	A0A6I8TI61	Ionotropic receptor coreceptor Ir25a (Ionotropic receptor 25a)	detection of chemical stimulus involved in sensory perception of smell [GO:0050911]; sensory perception of smell [GO:0007608]; signal transduction [GO:0007165]	hit with GO BP
GN011835	Chromosome_5A	2346	4	54	38.491048593350385	0.6220061864781263	9.836065573770492	6	0	9.836065573770492	6	0	NA	NA	NA	1.9258202567760343	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010789	Chromosome_5A	231	1	8	44.15584415584416	0.825	0.7352941176470589	8	0	0.7352941176470589	8	0	NA	NA	NA	0.47444468406297174	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010788	Chromosome_5A	213	1	6	42.72300469483568	0.6520408163265307	0.5454545454545454	6	0	0.5454545454545454	6	0	NA	NA	NA	0.43640897755610975	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010792	Chromosome_5A	3501	3	97	35.16138246215367	0.8972227065929014	0.48930772018847407	95	0	0.6558641975308642	35	0	0.438180956892468	60	0	0.280014000700035	48	0	unmethylated (<10%)	H2A0L1	Tyrosinase-like protein 2 (EC 1.14.18.-) (Tyrosinase 2)	NA	hit, no GO BP
GN010786	Chromosome_5A	463	1	14	40.388768898488124	0.7419871794871795	0.5181347150259067	14	0	0.5181347150259067	14	0	NA	NA	NA	0.5267358339984038	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012512	Chromosome_5A	212	1	8	40.56603773584906	0.9252591380250955	0.7829977628635347	8	0	0.7829977628635347	8	0	NA	NA	NA	0.7737459978655283	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010790	Chromosome_5A	372	1	21	44.354838709677416	1.16008316008316	0.5451713395638629	21	0	0.5451713395638629	21	0	NA	NA	NA	0.44340723453908987	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016132	Chromosome_5A	759	1	8	38.6034255599473	0.28307692307692306	24.107142857142858	6	0.16666666666666666	24.107142857142858	6	0.16666666666666666	NA	NA	NA	47.737226277372265	22	0.36363636363636365	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016137	Chromosome_5A	1449	2	17	35.81780538302277	0.3658004158004158	42.52758274824473	17	0.4117647058823529	41.40526976160602	12	0.4166666666666667	47	5	0.4	13.428120063191153	17	0.11764705882352941	sparse (10-50%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN019020	Chromosome_5A	15063	13	412	34.66109008829582	0.9107213768631692	0.6998250437390653	411	0	0.4656084656084656	86	0	0.7572221357813391	325	0	0.7214428857715431	51	0	unmethylated (<10%)	O16796	Neprilysin-11 (EC 3.4.24.-)	protein processing [GO:0016485]	hit with GO BP
GN012520	Chromosome_5A	5835	3	188	37.25792630676949	0.9287240013918415	0.6573443289111988	187	0	0.6688963210702341	56	0	0.6548311990686845	131	0	0.4423473901503981	61	0	unmethylated (<10%)	Q8N461	F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat protein 16)	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN012521	Chromosome_5A	3208	2	77	37.406483790523694	0.6861574615485043	80.92391304347827	77	0.8571428571428571	79.519595448799	16	0.8125	81.30841121495327	61	0.8688524590163934	0.6216006216006216	47	0	methylated (>=50%)	P17152	Transmembrane protein 11, mitochondrial (Protein PM1) (Protein PMI)	inner mitochondrial membrane organization [GO:0007007]; mitochondrion organization [GO:0007005]	hit with GO BP
GN012522	Chromosome_5A	8436	6	140	34.60170697012802	0.5576972840448258	89.82533284475387	140	0.9857142857142858	87.67605633802818	8	1	89.98556240976507	132	0.9848484848484849	24.380333197887037	34	0.23529411764705882	methylated (>=50%)	Q9Y140	Dehydrogenase/reductase SDR family protein 7-like (EC 1.1.-.-)	NA	hit, no GO BP
GN012523	Chromosome_5A	39489	14	397	34.052520955202716	0.34767865423754296	80.31711110268179	396	0.8712121212121212	89.35128518971848	28	1	79.72016660600914	368	0.8614130434782609	22.490628904623073	33	0.21212121212121213	methylated (>=50%)	P0C8Z3	Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.4.19.12) (Deubiquitinating enzyme 22) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22)	protein deubiquitination [GO:0016579]	hit with GO BP
GN012524	Chromosome_5A	31143	22	306	34.537456250200684	0.3310216344283469	65.93675287980874	305	0.7704918032786885	74.67460022313128	60	0.9	64.44161629016862	245	0.7387755102040816	47.03968770331815	23	0.43478260869565216	methylated (>=50%)	Q8IV35	Cilia- and flagella-associated protein 337 (WD repeat-containing protein 49)	NA	hit, no GO BP
GN012525	Chromosome_5A	18786	16	187	34.20632385819227	0.34131829206288566	61.330029573974905	185	0.7081081081081081	73.38187702265373	49	0.8775510204081632	58.362386691901584	136	0.6470588235294118	52.323008849557525	16	0.625	methylated (>=50%)	Q3V2A7	Glutamine-rich protein 2	cell projection assembly [GO:0030031]; flagellated sperm motility [GO:0030317]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]	hit with GO BP
GN004350	Chromosome_5A	374	1	11	43.04812834224599	0.6348765432098765	1.098901098901099	11	0	1.098901098901099	11	0	NA	NA	NA	3.0677141788252897	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012526	Chromosome_5A	2586	1	76	36.8522815158546	0.8662934720324414	0.4418912947414936	65	0	0.4418912947414936	65	0	NA	NA	NA	0.4824259131633356	40	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN012527	Chromosome_5A	1101	1	31	38.14713896457766	0.7741035585493639	0.4694835680751174	29	0	0.4694835680751174	29	0	NA	NA	NA	0.7547169811320755	41	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN012528	Chromosome_5A	487	1	19	37.987679671457904	1.0867982147051916	0.6226650062266501	19	0	0.6226650062266501	19	0	NA	NA	NA	3.068072866730585	27	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN012529	Chromosome_5A	378	1	12	44.17989417989418	0.6737967914438503	0.36101083032490977	12	0	0.36101083032490977	12	0	NA	NA	NA	11.41396933560477	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003600	Chromosome_5A	291	1	7	41.580756013745706	0.5677257525083612	1.3550135501355014	7	0	1.3550135501355014	7	0	NA	NA	NA	0.4357298474945534	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012539	Chromosome_5A	603	1	12	40.46434494195688	0.4877654196157735	0.8498583569405099	12	0	0.8498583569405099	12	0	NA	NA	NA	0.5531653349723418	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012538	Chromosome_5A	171	1	4	45.02923976608187	0.46153846153846156	0	4	0	0	4	0	NA	NA	NA	0.7568590350047304	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012537	Chromosome_5A	1503	1	40	41.583499667332	0.6188368502316006	31.104294478527606	40	0.2	31.104294478527606	40	0.2	NA	NA	NA	55.50957061562338	31	0.3870967741935484	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012536	Chromosome_5A	7941	5	191	35.04596398438484	0.7851728722027461	1.7791355916973672	191	0	2.9983792544570504	57	0	1.171401642655177	134	0	0.5319148936170213	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012559	Chromosome_5A	13844	11	174	34.635943368968505	0.4242008645128161	82.11276733635775	167	0.9041916167664671	84.32769367764915	27	0.9259259259259259	81.80700676090964	140	0.9	41.26040428061831	35	0.5142857142857142	methylated (>=50%)	Q92947	Glutaryl-CoA dehydrogenase, mitochondrial (GCD) (EC 1.3.8.6)	fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; fatty-acyl-CoA biosynthetic process [GO:0046949]; L-lysine catabolic process [GO:0019477]; L-tryptophan metabolic process [GO:0006568]	hit with GO BP
GN012558	Chromosome_5A	21665	7	512	35.25040387722132	0.7619042385786279	2.3788134679650725	502	0.00597609561752988	0.4247787610619469	49	0	2.599584066549352	453	0.006622516556291391	26.550868486352357	34	0.35294117647058826	unmethylated (<10%)	O93384	S-adenosylmethionine-dependent nucleotide dehydratase RSAD2 (SAND) (Radical S-adenosyl methionine domain-containing protein 2) (Virus inhibitory protein, endoplasmic reticulum-associated, interferon-inducible) (Viperin)	defense response to virus [GO:0051607]; positive regulation of immune response [GO:0050778]	hit with GO BP
GN012557	Chromosome_5A	1600	5	19	39.75	0.3070458952811894	19.7	19	0.10526315789473684	23.85185185185185	14	0.14285714285714285	11.076923076923077	5	0	17.433414043583536	39	0.10256410256410256	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012556	Chromosome_5A	1223	2	17	41.128372853638595	0.3288570434342476	13.673805601317957	17	0.058823529411764705	12.975778546712803	16	0.0625	27.586206896551722	1	0	0.49854590776900704	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012555	Chromosome_5A	2133	1	80	42.52226910454758	0.8297350916092893	0.7203667321545514	80	0	0.7203667321545514	80	0	NA	NA	NA	0.9958992384299942	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012554	Chromosome_5A	20473	3	510	33.90318956674645	0.8668980115004884	3.9736859591999467	500	0	3.5590277777777777	33	0	3.9901886270987355	467	0	0.693148493735004	58	0	unmethylated (<10%)	Q9U637	Pituitary homeobox x (Bicoid type transcription factor Pitx) (BbPtx) (Homeobox protein Ptx) (Paired-like homeodomain transcription factor x)	anatomical structure morphogenesis [GO:0009653]	hit with GO BP
GN012553	Chromosome_5A	1422	1	53	38.045007032348806	1.0300404548436475	0.44642857142857145	53	0	0.44642857142857145	53	0	NA	NA	NA	0.5549774540409296	51	0	unmethylated (<10%)	P22770	Neuronal acetylcholine receptor subunit alpha-7 (nAChR7) (Nicotinic acetylcholine receptor subunit alpha-7)	calcium ion transport [GO:0006816]; cognition [GO:0050890]; intracellular calcium ion homeostasis [GO:0006874]; monoatomic ion transmembrane transport [GO:0034220]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of MAPK cascade [GO:0043410]; regulation of membrane potential [GO:0042391]; response to hypoxia [GO:0001666]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN012552	Chromosome_5A	723	1	34	39.55739972337483	1.2312546957175057	1.4226437462951986	34	0	1.4226437462951986	34	0	NA	NA	NA	1.355421686746988	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012551	Chromosome_5A	37582	24	486	36.27800542813049	0.3952895217843191	83.19166438168358	398	0.9296482412060302	89.2077354959451	102	0.9509803921568627	81.79536679536679	296	0.9222972972972973	51.75438596491228	13	0.46153846153846156	methylated (>=50%)	P42694	ATP-dependent RNA helicase with zinc finger domain (EC 3.6.4.13) (Down-regulated in human cancers protein)	negative regulation of translation [GO:0017148]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]	hit with GO BP
GN012544	Chromosome_5A	7515	12	212	35.55555555555556	0.8937434926219797	0.7423117709437964	212	0	0.6442376521116678	51	0	0.7712625462229266	161	0	0.7518796992481203	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012543	Chromosome_5A	1884	1	90	43.63057324840764	1.0188618022965852	0.4073319755600815	90	0	0.4073319755600815	90	0	NA	NA	NA	0.3223495702005731	47	0	unmethylated (<10%)	P41827	Heat shock protein 70 B2	response to stress [GO:0006950]	hit with GO BP
GN012546	Chromosome_5A	2534	4	22	36.10891870560379	0.2663850608765458	80.95617529880478	22	0.9545454545454546	83.33333333333333	4	1	80.39408866995073	18	0.9444444444444444	13.402417962003454	42	0.16666666666666666	methylated (>=50%)	Q9NQM4	Dynein axonemal assembly factor 6 (PIH1 domain-containing protein 3) (Sarcoma antigen NY-SAR-97)	axonemal dynein complex assembly [GO:0070286]; cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]; inner dynein arm assembly [GO:0036159]; outer dynein arm assembly [GO:0036158]	hit with GO BP
GN004799	Chromosome_5A	237	1	3	50.63291139240506	0.19799498746867167	1.6666666666666667	3	0	1.6666666666666667	3	0	NA	NA	NA	1.8791946308724832	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001978	Chromosome_5A	344	1	5	41.56976744186046	0.35788597586350396	0.4854368932038835	5	0	0.4854368932038835	5	0	NA	NA	NA	0.985545335085414	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012561	Chromosome_5A	5602	9	155	35.14816137093895	0.8986204683991017	0.7936507936507936	125	0	0.4608294930875576	53	0	1.0204081632653061	72	0	1.408450704225352	42	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN012562	Chromosome_5A	1254	1	18	37.240829346092504	0.41442367715639117	1.6286644951140066	14	0	1.6286644951140066	14	0	NA	NA	NA	3.2008830022075054	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012563	Chromosome_5A	597	1	21	45.05862646566164	0.6958041958041958	2.5641025641025643	3	0	2.5641025641025643	3	0	NA	NA	NA	0.6482982171799028	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012564	Chromosome_5A	429	1	7	43.58974358974359	0.348780487804878	NA	0	NA	NA	NA	NA	NA	NA	NA	1.3114754098360655	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012565	Chromosome_5A	2115	1	44	35.69739952718676	0.6565079365079365	1.0738255033557047	40	0	1.0738255033557047	40	0	NA	NA	NA	0.8223684210526315	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012567	Chromosome_5A	240	1	9	43.333333333333336	0.8181818181818182	0	9	0	0	9	0	NA	NA	NA	0.2633658151171978	32	0	unmethylated (<10%)	O18783	Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin; Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	proteolysis [GO:0006508]	hit with GO BP
GN012587	Chromosome_5A	9128	14	269	37.6205083260298	0.8361977574772044	0.48326865343779746	267	0	0.4087193460490463	105	0	0.5187506754566087	162	0	0.6201550387596899	62	0	unmethylated (<10%)	O18783	Plasminogen (EC 3.4.21.7) [Cleaved into: Plasmin; Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	proteolysis [GO:0006508]	hit with GO BP
GN012586	Chromosome_5A	9734	12	301	37.908362440928705	0.8668443786982248	0.932034768038538	221	0	0.5605011539729641	74	0	1.1049723756906078	147	0	0.5364468286525718	63	0	unmethylated (<10%)	G3V801	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)	exocytosis [GO:0006887]; proteolysis [GO:0006508]; zymogen activation [GO:0031638]	hit with GO BP
GN012585	Chromosome_5A	1296	2	42	42.74691358024691	0.7103315976979995	0.42016806722689076	42	0	0.4287245444801715	41	0	0	1	0	0.5035780545984627	64	0	unmethylated (<10%)	O15973	Rhodopsin, GQ-coupled (GQ-rhodopsin)	visual perception [GO:0007601]	hit with GO BP
GN012584	Chromosome_5A	1449	1	50	43.13319530710835	0.7454163837273906	0.45	50	0	0.45	50	0	NA	NA	NA	0.5008347245409015	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012583	Chromosome_5A	180	1	9	46.111111111111114	1.2071535022354694	NA	0	NA	NA	NA	NA	NA	NA	NA	0.517464424320828	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012582	Chromosome_5A	1368	3	15	37.5	0.31986531986531985	72.22222222222223	5	0.8	72.22222222222223	5	0.8	NA	NA	NA	72.34042553191489	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012581	Chromosome_5A	2104	3	26	36.78707224334601	0.3765418502202643	80.08298755186722	20	1	79.30029154518951	16	1	82.01438848920863	4	1	74.48275862068965	7	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012580	Chromosome_5A	31445	20	381	35.65590713944983	0.3832754580661178	85.10392149040571	357	0.9243697478991597	83.1109849560034	66	0.8333333333333334	85.42981804678797	291	0.9450171821305842	0.644122383252818	34	0	methylated (>=50%)	Q6ZPJ3	(E3-independent) E2 ubiquitin-conjugating enzyme UBE2O (EC 2.3.2.24) (E2/E3 hybrid ubiquitin-protein ligase UBE2O) (Ubiquitin carrier protein O) (Ubiquitin-conjugating enzyme E2 O) (Ubiquitin-conjugating enzyme E2 of 230 kDa) (Ubiquitin-conjugating enzyme E2-230K) (Ubiquitin-protein ligase O)	positive regulation of BMP signaling pathway [GO:0030513]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN012579	Chromosome_5A	1638	1	66	42.30769230769231	0.9004797761044846	0.5681818181818182	66	0	0.5681818181818182	66	0	NA	NA	NA	0.6642512077294686	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012578	Chromosome_5A	16773	6	142	33.66124128062958	0.2989207299051128	70.8890057864282	141	0.8368794326241135	64.2346208869814	12	0.8333333333333334	71.41721553486259	129	0.8372093023255814	23.880597014925375	23	0.21739130434782608	methylated (>=50%)	A6NDU8	RAB7A-interacting MON1-CCZ1 complex subunit 1 (UPF0600 protein C5orf51)	mitophagy [GO:0000423]	hit with GO BP
GN012577	Chromosome_5A	21540	19	246	33.978644382544104	0.3961397079437418	75.84120765153261	245	0.926530612244898	66.81933842239185	38	0.8157894736842105	76.99304788512767	207	0.9468599033816425	53.7838931606637	37	0.4864864864864865	methylated (>=50%)	Q28CB1	TBC1 domain family member 2B	NA	hit, no GO BP
GN012576	Chromosome_5A	1716	2	73	40.85081585081585	1.020031268321282	1.686217008797654	73	0	1.7585931254996003	68	0	0.8849557522123894	5	0	0.7079646017699115	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012575	Chromosome_5A	3539	2	105	37.694263916360555	0.8363360964005104	0.8517495395948435	105	0	0.966183574879227	59	0	0.7944732297063903	46	0	0.42861852950873724	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012574	Chromosome_5A	21083	16	207	35.255893373808284	0.3182260726012444	83.4077253218884	198	0.898989898989899	88.79581151832461	35	0.9428571428571428	82.35112936344969	163	0.8895705521472392	29.748283752860413	16	0.125	methylated (>=50%)	Q8VII6	Choline transporter-like protein 1 (Solute carrier family 44 member 1) (CD antigen CD92)	choline transport [GO:0015871]; ethanolamine transport [GO:0034229]; transmembrane transport [GO:0055085]	hit with GO BP
GN012573	Chromosome_5A	14678	12	159	35.113775718762774	0.35501307605530275	94.123966054356	159	0.9937106918238994	94.9317738791423	54	1	93.81672597864768	105	0.9904761904761905	92.04257475924987	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012572	Chromosome_5A	7255	3	84	36.45761543762922	0.34909778312424816	82.94701986754967	82	0.9024390243902439	50.24437927663734	20	0.65	90.52798549739407	62	0.9838709677419355	20.372750642673523	52	0.19230769230769232	methylated (>=50%)	Q5GH73	XK-related protein 6	apoptotic process involved in development [GO:1902742]; engulfment of apoptotic cell [GO:0043652]; phosphatidylserine exposure on apoptotic cell surface [GO:0070782]	hit with GO BP
GN012571	Chromosome_5A	5416	3	69	37.74002954209749	0.35967384274230807	71.97841726618705	69	0.855072463768116	64.1732283464567	4	1	72.76326207442597	65	0.8461538461538461	29.42039618488628	42	0.35714285714285715	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012570	Chromosome_5A	3873	2	145	40.253033823909114	0.9242554410080184	24.251341526743985	145	0.25517241379310346	31.05756358768407	119	0.31092436974789917	0.694980694980695	26	0	0.5311443746982134	38	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012569	Chromosome_5A	1399	2	53	42.74481772694782	0.8311978028137437	0.4646840148698885	53	0	0.5047955577990914	51	0	0	2	0	0.5080831408775982	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012568	Chromosome_5A	1998	2	70	38.588588588588586	0.9416913546997038	2.118242175150174	70	0	2.138364779874214	57	0	2.056555269922879	13	0	0.8916001877053027	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012588	Chromosome_5A	9311	2	272	35.66749006551391	0.9190376310919186	0.9234927547113146	269	0	0.5035246727089627	25	0	0.9573259776083076	244	0	0.11618900077459333	51	0	unmethylated (<10%)	O94818	Nucleolar protein 4 (Nucleolar-localized protein)	NA	hit, no GO BP
GN012589	Chromosome_5A	563	2	4	33.214920071047956	0.2576659038901602	93.22033898305085	3	1	93.22033898305085	3	1	NA	NA	NA	94.3418467583497	35	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012590	Chromosome_5A	3855	4	125	38.36575875486381	0.8867156878981595	8.799555390885514	125	0.024	5.852674066599395	82	0.024390243902439025	12.412371134020619	43	0.023255813953488372	0.5659448818897638	103	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012591	Chromosome_5A	276	1	30	56.52173913043478	1.361842105263158	0.6507592190889371	30	0	0.6507592190889371	30	0	NA	NA	NA	0.5707297187117815	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012592	Chromosome_5A	2048	2	67	37.255859375	0.94455840848076	1.4821029082774049	67	0	1.0427528675703859	23	0	1.6431027894535728	44	0	0.7962529274004684	53	0	unmethylated (<10%)	O44252	Protein rolling stone	myoblast fusion [GO:0007520]	hit with GO BP
GN012593	Chromosome_5A	4635	3	102	36.267529665587915	0.6692288092406998	2.4543174489430313	102	0	2.4539877300613497	16	0	2.4543610547667343	86	0	0.554016620498615	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012594	Chromosome_5A	1127	3	38	37.97692990239574	0.935147174425714	1.220703125	38	0	1.3944223107569722	29	0	0.7380073800738007	9	0	0.609537468626748	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012595	Chromosome_5A	18792	20	187	35.084078331204765	0.325165270489895	87.73729513029124	144	0.9791666666666666	92.5560538116592	35	1	86.01823708206688	109	0.9724770642201835	55.08932280847528	36	0.6111111111111112	methylated (>=50%)	B6MFW3	Protein Hook homolog	cytoplasmic microtubule organization [GO:0031122]; cytoskeleton-dependent intracellular transport [GO:0030705]; endomembrane system organization [GO:0010256]	hit with GO BP
GN001843	Chromosome_5A	1005	1	24	40.8955223880597	0.5712391057218643	1.185495118549512	24	0	1.185495118549512	24	0	NA	NA	NA	0.9022013713460845	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012598	Chromosome_5A	8122	7	202	36.3211031765575	0.754836533918194	0.5459707359685521	200	0	0.5551497443389335	153	0	0.5188067444876784	47	0	0.7512520868113522	54	0	unmethylated (<10%)	Q9BYK8	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (Helicase with zinc finger 2, transcriptional coactivator) (Helicase with zinc finger domain 2) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012599	Chromosome_5A	20585	12	433	35.21982025746903	0.6798319828303488	1.4451813641201998	431	0	1.0731220364362366	159	0	1.6268583962953935	272	0	0.7401735579377233	49	0	unmethylated (<10%)	E9QAM5	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012600	Chromosome_5A	11607	16	305	38.511243215301114	0.7090041495188669	0.6243705941591138	290	0	0.6117793446702613	188	0	0.6474957151018853	102	0	0.42841842199214564	43	0	unmethylated (<10%)	E9QAM5	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012653	Chromosome_5A	5906	9	48	35.70944801896376	0.2617859451472897	63.279760283301556	48	0.8125	65.06024096385542	20	0.85	62.27059325650875	28	0.7857142857142857	32.33205898416166	32	0.1875	methylated (>=50%)	Q9UN86	Ras GTPase-activating protein-binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2)	membraneless organelle assembly [GO:0140694]; negative regulation of stress granule assembly [GO:0062030]; positive regulation of stress granule assembly [GO:0062029]; protein deubiquitination [GO:0016579]; protein homooligomerization [GO:0051260]; stress granule assembly [GO:0034063]	hit with GO BP
GN012601	Chromosome_5A	13320	17	323	37.04204204204204	0.7072685738634346	0.7198515769944341	322	0	0.581933606665785	198	0	0.8961785593506932	124	0	0.44372730939895116	47	0	unmethylated (<10%)	E9QAM5	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012602	Chromosome_5A	23035	15	608	36.678966789667896	0.7848799446307831	0.9657976907995062	603	0	0.7459036439227195	173	0	1.0586655649659162	430	0	0.36855036855036855	32	0	unmethylated (<10%)	Q9BYK8	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (Helicase with zinc finger 2, transcriptional coactivator) (Helicase with zinc finger domain 2) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012603	Chromosome_5A	1110	2	8	32.16216216216216	0.27896456396079417	5.167958656330749	8	0	0	1	0	5.698005698005698	7	0	5.4493984430290165	48	0	unmethylated (<10%)	Q9UG01	Intraflagellar transport protein 172 homolog	cilium assembly [GO:0060271]; intraciliary anterograde transport [GO:0035720]; intraciliary transport [GO:0042073]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN012604	Chromosome_5A	2301	4	67	37.54889178617992	0.8391958978378732	0.6101694915254238	41	0	0.6507592190889371	17	0	0.591715976331361	24	0	0.9095502779181405	42	0	unmethylated (<10%)	E9QAM5	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012605	Chromosome_5A	11477	9	355	37.37039295983271	0.8875920305407635	1.1845011041959446	352	0	1.696326360703507	168	0	0.7077072224915172	184	0	0.8034279592929834	39	0	unmethylated (<10%)	Q9BYK8	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (Helicase with zinc finger 2, transcriptional coactivator) (Helicase with zinc finger domain 2) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012606	Chromosome_5A	13651	15	147	34.019485751959564	0.37433432300360325	76.45402361096069	147	0.8231292517006803	84.04907975460122	31	0.9354838709677419	74.6236559139785	116	0.7931034482758621	9.55056179775281	28	0.21428571428571427	methylated (>=50%)	Q9NWZ5	Uridine-cytidine kinase-like 1 (EC 2.7.1.48)	CTP salvage [GO:0044211]; pyrimidine nucleoside salvage [GO:0043097]; UMP salvage [GO:0044206]	hit with GO BP
GN012607	Chromosome_5A	1086	1	11	37.753222836095766	0.28450308414108455	82.1311475409836	11	1	82.1311475409836	11	1	NA	NA	NA	57.31922398589065	21	0.5238095238095238	methylated (>=50%)	Q8BSL4	Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5)	heparan sulfate proteoglycan biosynthetic process [GO:0015012]; negative regulation of coagulation [GO:0050819]; protein sulfation [GO:0006477]; regulation of viral entry into host cell [GO:0046596]	hit with GO BP
GN012618	Chromosome_5A	7874	5	124	34.1503683007366	0.5456687456687457	73.21973959170552	123	0.8292682926829268	46.71916010498688	7	0.5714285714285714	74.9486301369863	116	0.8448275862068966	42.18924972004479	57	0.47368421052631576	methylated (>=50%)	Q76I81	Small ribosomal subunit protein eS12 (40S ribosomal protein S12)	maintenance of translational fidelity [GO:1990145]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN012617	Chromosome_5A	1581	1	19	41.808981657179004	0.27500686624553694	74.37774524158127	19	1	74.37774524158127	19	1	NA	NA	NA	43.93511988716502	25	0.4	methylated (>=50%)	Q49LS8	XK-related protein 6	apoptotic process involved in development [GO:1902742]; engulfment of apoptotic cell [GO:0043652]; phosphatidylserine exposure on apoptotic cell surface [GO:0070782]	hit with GO BP
GN012616	Chromosome_5A	26771	17	450	35.833551230809455	0.5248255221266697	59.784133837021045	306	0.7581699346405228	77.14285714285714	60	0.9666666666666667	56.08510638297872	246	0.7073170731707317	4.656419529837251	28	0.03571428571428571	methylated (>=50%)	Q6ZT98	Tubulin polyglutamylase TTLL7 (EC 6.3.2.-) (Testis development protein NYD-SP30) (Tubulin--tyrosine ligase-like protein 7)	microtubule cytoskeleton organization [GO:0000226]; protein polyglutamylation [GO:0018095]	hit with GO BP
GN012615	Chromosome_5A	429	1	14	51.282051282051285	0.5033945184812673	33.68983957219251	14	0.14285714285714285	33.68983957219251	14	0.14285714285714285	NA	NA	NA	19.6437168993741	61	0.04918032786885246	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012614	Chromosome_5A	4930	3	47	32.697768762677484	0.3566788581843259	65.96610169491525	47	0.7659574468085106	54.57286432160804	16	0.625	71.76470588235294	31	0.8387096774193549	0.39739884393063585	62	0	methylated (>=50%)	Q6P8Y1	Calcyphosin-like protein	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]; endothelial cell proliferation [GO:0001935]; gene expression [GO:0010467]; retina development in camera-type eye [GO:0060041]; vasculogenesis [GO:0001570]	hit with GO BP
GN012608	Chromosome_5A	27499	34	437	35.23037201352776	0.5127510582128767	91.17990434225888	410	0.9634146341463414	92.59962049335863	70	0.9714285714285714	90.95083974807558	340	0.961764705882353	58.42696629213483	8	0.75	methylated (>=50%)	O75694	Nuclear pore complex protein Nup155 (155 kDa nucleoporin) (Nucleoporin Nup155)	nuclear envelope organization [GO:0006998]; nucleocytoplasmic transport [GO:0006913]; protein import into nucleus [GO:0006606]; protein localization to nuclear inner membrane [GO:0036228]; RNA export from nucleus [GO:0006405]; transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery [GO:0000972]	hit with GO BP
GN012629	Chromosome_5A	1866	4	48	37.67416934619507	0.7311912225705329	1.0261194029850746	48	0	1.0558069381598794	17	0	1.012829169480081	31	0	0.9817045961624274	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012627	Chromosome_5A	270	1	0	35.55555555555556	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9237875288683602	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012628	Chromosome_5A	300	1	2	38	0.21699819168173598	0.7246376811594203	2	0	0.7246376811594203	2	0	NA	NA	NA	1.0188487009679064	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012647	Chromosome_5A	4940	6	68	34.473684210526315	0.4635476463834673	65.5980271270037	68	0.7794117647058824	59.02439024390244	12	0.75	66.93030153237765	56	0.7857142857142857	52.8364849833148	40	0.6	methylated (>=50%)	Q5PQ44	Cilia- and flagella-associated protein 299	NA	hit, no GO BP
GN012646	Chromosome_5A	6858	3	239	37.44531933508311	0.9941903629658385	0.6219599712941551	239	0	0.7783417935702199	52	0	0.5737533903609431	187	0	0.7332722273143905	64	0	unmethylated (<10%)	Q7T2X7	Bone morphogenetic protein 3 (BMP-3) (xBMP-3)	cell surface receptor protein serine/threonine kinase signaling pathway [GO:0007178]; osteoblast differentiation [GO:0001649]	hit with GO BP
GN012645	Chromosome_5A	561	1	1	42.60249554367201	0.039285714285714285	0	1	0	0	1	0	NA	NA	NA	0.6449301325689717	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012644	Chromosome_5A	1944	1	43	36.059670781893004	0.6846528084918178	6.38477801268499	43	0	6.38477801268499	43	0	NA	NA	NA	0.4397537379067722	38	0	unmethylated (<10%)	M9PH32	Protein meiotic P26	protein ubiquitination [GO:0016567]	hit with GO BP
GN012643	Chromosome_5A	426	1	21	42.25352112676056	1.1244343891402715	0.6543075245365322	21	0	0.6543075245365322	21	0	NA	NA	NA	0.8253692441355344	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012642	Chromosome_5A	33033	38	362	34.94989858626222	0.36058144880579696	88.347260909935	358	0.9608938547486033	90.01177856301531	89	0.9887640449438202	87.93871061000289	269	0.9516728624535316	0.21645021645021645	31	0	methylated (>=50%)	O14981	TATA-binding protein-associated factor 172 (EC 3.6.4.-) (ATP-dependent helicase BTAF1) (B-TFIID transcription factor-associated 170 kDa subunit) (TAF(II)170) (TBP-associated factor 172) (TAF-172)	negative regulation of chromatin binding [GO:0035562]; negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN012641	Chromosome_5A	29705	35	293	34.51607473489312	0.33156627561681307	84.3607305936073	293	0.9385665529010239	89.77411477411478	56	0.9642857142857143	83.18783068783068	237	0.9324894514767933	0.6516072980017377	33	0	methylated (>=50%)	Q13045	Protein flightless-1 homolog	actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; myofibril assembly [GO:0030239]; sarcomere organization [GO:0045214]	hit with GO BP
GN012640	Chromosome_5A	5736	6	73	33.22873082287308	0.46117805657341293	81.60978094752929	73	0.9041095890410958	56.39686684073107	6	0.6666666666666666	83.36360334180894	67	0.9253731343283582	35.521803037726606	41	0.5365853658536586	methylated (>=50%)	Q9NVX0	HAUS augmin-like complex subunit 2 (Centrosomal protein of 27 kDa) (Cep27)	centrosome cycle [GO:0007098]; regulation of microtubule nucleation [GO:0010968]; spindle assembly [GO:0051225]	hit with GO BP
GN012639	Chromosome_5A	10764	17	148	34.531772575250834	0.4639884896444663	87.30833179382967	148	0.9932432432432432	91.95634599838318	49	0.9795918367346939	85.93151340996168	99	1	89.81042654028435	43	0.9767441860465116	methylated (>=50%)	A5PKG6	Ubiquitin conjugation factor E4 A (EC 2.3.2.27) (RING-type E3 ubiquitin transferase E4 A)	ERAD pathway [GO:0036503]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012638	Chromosome_5A	7445	3	224	35.07051712558764	0.9785074311598242	0.6439105449006439	223	0	0.6728343145500421	20	0	0.6413158291836427	203	0	0.7179896290386917	48	0	unmethylated (<10%)	Q6UX73	UPF0764 protein C16orf89	NA	hit, no GO BP
GN012637	Chromosome_5A	18014	7	562	36.97679582546908	0.9128407824059998	1.1432786280656464	556	0	0.364741641337386	32	0	1.193561052218296	524	0	0.6697362913352868	44	0	unmethylated (<10%)	P20350	Protein rhomboid (EC 3.4.21.105) (Protein veinlet)	axonogenesis [GO:0007409]; behavioral response to ethanol [GO:0048149]; brain development [GO:0007420]; compound eye photoreceptor fate commitment [GO:0001752]; determination of genital disc primordium [GO:0035225]; dorsal closure [GO:0007391]; epidermal growth factor receptor ligand maturation [GO:0038004]; epithelial cell proliferation involved in Malpighian tubule morphogenesis [GO:0061331]; imaginal disc-derived wing morphogenesis [GO:0007476]; imaginal disc-derived wing vein morphogenesis [GO:0008586]; imaginal disc-derived wing vein specification [GO:0007474]; larval salivary gland morphogenesis [GO:0007436]; leg disc proximal/distal pattern formation [GO:0007479]; maintenance of epithelial integrity, open tracheal system [GO:0035160]; mitotic cytokinesis [GO:0000281]; negative regulation of gene expression [GO:0010629]; negative regulation of intracellular protein transport [GO:0090317]; oenocyte development [GO:0007438]; oenocyte differentiation [GO:0001742]; photoreceptor cell fate determination [GO:0043703]; positive regulation of gene expression [GO:0010628]; positive regulation of phosphorylation [GO:0042327]; protein processing [GO:0016485]; R8 cell differentiation [GO:0045465]; regulation of circadian sleep/wake cycle [GO:0042749]; regulation of epidermal growth factor receptor signaling pathway [GO:0042058]; stem cell fate commitment [GO:0048865]; tracheal pit formation in open tracheal system [GO:0035202]; wing cell fate specification [GO:0035311]	hit with GO BP
GN012636	Chromosome_5A	20881	11	658	35.57300895550979	0.9967302322251128	0.7111824445858815	658	0	0.581757739455641	103	0	0.7310688290128975	555	0	2.3336486912645853	50	0	unmethylated (<10%)	S4R2P9	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3) (Solute carrier family 8 member 3)	calcium ion export across plasma membrane [GO:1990034]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport into cytosol [GO:0060402]; cell communication [GO:0007154]; cellular response to cAMP [GO:0071320]; cellular response to hypoxia [GO:0071456]; hematopoietic progenitor cell differentiation [GO:0002244]; intracellular calcium ion homeostasis [GO:0006874]; learning [GO:0007612]; learning or memory [GO:0007611]; long-term synaptic potentiation [GO:0060291]; memory [GO:0007613]; metal ion transport [GO:0030001]; mitochondrial calcium ion homeostasis [GO:0051560]; mitochondrial calcium ion transmembrane transport [GO:0006851]; modulation of excitatory postsynaptic potential [GO:0098815]; myelination [GO:0042552]; negative regulation of intracellular signal transduction [GO:1902532]; oligodendrocyte differentiation [GO:0048709]; regulation of skeletal muscle contraction [GO:0014819]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; synapse organization [GO:0050808]; telencephalon development [GO:0021537]	hit with GO BP
GN012635	Chromosome_5A	8997	10	244	36.26764477047905	0.8257587213173212	1.5891964485562933	244	0	0.4993757802746567	105	0	2.198441316738397	139	0	0.5356017643352237	56	0	unmethylated (<10%)	P70549	Sodium/calcium exchanger 3 (Na(+)/Ca(2+)-exchange protein 3) (Solute carrier family 8 member 3)	calcium ion export across plasma membrane [GO:1990034]; calcium ion import across plasma membrane [GO:0098703]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport into cytosol [GO:0060402]; cell communication [GO:0007154]; cellular response to cAMP [GO:0071320]; cellular response to hypoxia [GO:0071456]; hematopoietic progenitor cell differentiation [GO:0002244]; intracellular calcium ion homeostasis [GO:0006874]; learning [GO:0007612]; learning or memory [GO:0007611]; long-term synaptic potentiation [GO:0060291]; memory [GO:0007613]; metal ion transport [GO:0030001]; mitochondrial calcium ion homeostasis [GO:0051560]; mitochondrial calcium ion transmembrane transport [GO:0006851]; modulation of excitatory postsynaptic potential [GO:0098815]; myelination [GO:0042552]; negative regulation of intracellular signal transduction [GO:1902532]; oligodendrocyte differentiation [GO:0048709]; regulation of skeletal muscle contraction [GO:0014819]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; synapse organization [GO:0050808]; telencephalon development [GO:0021537]	hit with GO BP
GN012634	Chromosome_5A	1282	3	10	35.569422776911075	0.2476863927046504	93.19526627218934	9	1	87.55364806866953	3	1	96.16252821670429	6	1	85.60097620500305	25	1	methylated (>=50%)	Q5XH16	NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (U4/U6.U5 small nuclear ribonucleoprotein SNU13) (U4/U6.U5 tri-snRNP 15.5 kDa protein)	maturation of SSU-rRNA [GO:0030490]; mRNA splicing, via spliceosome [GO:0000398]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN012633	Chromosome_5A	11874	10	199	35.14401212733704	0.5432543309968604	9.114117947408731	155	0.09032258064516129	8.609958506224066	34	0.14705882352941177	9.27869962749746	121	0.0743801652892562	0.5908419497784343	49	0	unmethylated (<10%)	Q14565	Meiotic recombination protein DMC1 homolog (EC 3.6.4.-)	DNA recombinase assembly [GO:0000730]; DNA strand invasion [GO:0042148]; double-strand break repair involved in meiotic recombination [GO:1990918]; female gamete generation [GO:0007292]; female meiosis I [GO:0007144]; homologous chromosome pairing at meiosis [GO:0007129]; male meiosis I [GO:0007141]; meiotic cell cycle [GO:0051321]; mitotic recombination [GO:0006312]; reciprocal meiotic recombination [GO:0007131]; spermatogenesis [GO:0007283]	hit with GO BP
GN012654	Chromosome_5A	762	1	11	39.10761154855643	0.3837912087912088	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN012655	Chromosome_5A	5881	9	49	35.742220710763476	0.26780510018214937	74.17173766058147	49	0.8571428571428571	82.01780415430267	20	1	69.36773255813954	29	0.7586206896551724	62.62975778546713	5	0.6	methylated (>=50%)	Q9UN86	Ras GTPase-activating protein-binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2)	membraneless organelle assembly [GO:0140694]; negative regulation of stress granule assembly [GO:0062030]; positive regulation of stress granule assembly [GO:0062029]; protein deubiquitination [GO:0016579]; protein homooligomerization [GO:0051260]; stress granule assembly [GO:0034063]	hit with GO BP
GN012656	Chromosome_5A	834	1	28	36.091127098321344	1.0524607896160088	1.804461942257218	28	0	1.804461942257218	28	0	NA	NA	NA	0.7923930269413629	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012657	Chromosome_5A	41322	11	528	34.25536034073859	0.43635415867927946	81.30034356324163	526	0.9315589353612167	77.9088471849866	34	0.7647058823529411	81.49334797998291	492	0.943089430894309	79.28909952606635	35	0.8	methylated (>=50%)	Q9LUC8	Cytochrome P450 72A13 (EC 1.14.-.-)	NA	hit, no GO BP
GN012667	Chromosome_5A	12047	8	213	34.39860546194073	0.5986089749436795	12.372850009247273	210	0.09047619047619047	8.19277108433735	31	0.0967741935483871	13.13087175005462	179	0.0893854748603352	0.5039899202015959	60	0	sparse (10-50%)	P51156	Ras-related protein Rab-26 (EC 3.6.5.2)	exocrine system development [GO:0035272]; Golgi to plasma membrane protein transport [GO:0043001]; regulated exocytosis [GO:0045055]; regulation of exocytosis [GO:0017157]; regulation protein catabolic process at presynapse [GO:0140251]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN012666	Chromosome_5A	282	1	11	41.48936170212766	0.9365942028985508	0.43956043956043955	11	0	0.43956043956043955	11	0	NA	NA	NA	0.5221130221130221	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012665	Chromosome_5A	1509	2	57	38.767395626242546	1.0203687007687197	0.7510729613733905	57	0	0.7210205213533001	56	0	1.639344262295082	1	0	0.3125	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012664	Chromosome_5A	1377	1	27	41.75744371822803	0.45801611353389016	55.34506089309878	27	0.48148148148148145	55.34506089309878	27	0.48148148148148145	NA	NA	NA	1.693121693121693	52	0	methylated (>=50%)	Q0WU02	Metal tolerance protein 10 (AtMTP10)	regulation of abscisic acid-activated signaling pathway [GO:0009787]; regulation of jasmonic acid mediated signaling pathway [GO:2000022]; regulation of salicylic acid mediated signaling pathway [GO:2000031]	hit with GO BP
GN012663	Chromosome_5A	16253	11	293	35.11967021472959	0.587086541756971	85.8202329346634	293	0.9453924914675768	71.58948685857321	18	0.6111111111111112	86.43993895792457	275	0.9672727272727273	12.048192771084338	36	0.2222222222222222	methylated (>=50%)	Q9D8V0	Signal peptide peptidase (EC 3.4.23.-) (Minor histocompatibility antigen H13) (Presenilin-like protein 3) (Signal peptide peptidase-like 1)	in utero embryonic development [GO:0001701]; membrane protein proteolysis [GO:0033619]; retrograde protein transport, ER to cytosol [GO:0030970]	hit with GO BP
GN012662	Chromosome_5A	475	2	4	34.10526315789474	0.2972465581977472	93.10344827586206	4	1	93.10344827586206	4	1	NA	NA	NA	90.33149171270718	27	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012661	Chromosome_5A	14962	4	135	34.83491511829969	0.30034406478213915	54.2668428005284	134	0.6417910447761194	62.86644951140065	16	0.75	53.07565047375545	118	0.6271186440677966	1.5359741309620047	53	0	methylated (>=50%)	A2VE79	Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP-1) (EC 3.6.1.52) (Diadenosine hexaphosphate hydrolase) (Ap6A hydrolase) (EC 3.6.1.61) (Endopolyphosphatase) (EC 3.6.1.10) (Nucleoside diphosphate-linked moiety X motif 3) (Nudix motif 3) (m7GpppN-mRNA hydrolase) (EC 3.6.1.62) (m7GpppX diphosphatase) (EC 3.6.1.59)	adenosine 5'-(hexahydrogen pentaphosphate) catabolic process [GO:1901911]; diadenosine hexaphosphate catabolic process [GO:1901909]; diadenosine pentaphosphate catabolic process [GO:1901907]; diphosphoinositol polyphosphate catabolic process [GO:0071544]; diphosphoinositol polyphosphate metabolic process [GO:0071543]; RNA decapping [GO:0110154]	hit with GO BP
GN012660	Chromosome_5A	10897	9	83	36.00073414701294	0.2491696649457555	87.93103448275862	83	1	84.06374501992032	11	1	88.38126159554731	72	1	1.1432926829268293	46	0	methylated (>=50%)	Q32LJ2	ADP-ribosylation factor-related protein 1 (ARF-related protein 1)	Golgi to plasma membrane protein transport [GO:0043001]; intracellular protein transport [GO:0006886]; protein localization to Golgi apparatus [GO:0034067]	hit with GO BP
GN012659	Chromosome_5A	1191	1	57	47.43912678421495	0.8627802348635046	0.5852842809364549	49	0	0.5852842809364549	49	0	NA	NA	NA	1.1712439418416802	40	0	unmethylated (<10%)	Q5J3Q5	Forkhead box protein E1 (FoxE1)	anatomical structure morphogenesis [GO:0009653]; animal organ development [GO:0048513]; cell differentiation [GO:0030154]; regulation of transcription by RNA polymerase II [GO:0006357]; system development [GO:0048731]	hit with GO BP
GN012658	Chromosome_5A	7279	3	232	36.625910152493475	0.9521255722694572	0.6738842244807778	232	0	0.6381381381381381	78	0	0.6887914840325611	154	0	0.45836516424751717	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012668	Chromosome_5A	23311	14	335	36.10312727896701	0.44273219787035495	85.53083923154702	335	0.982089552238806	86.10400682011935	27	0.9629629629629629	85.49470629333047	308	0.9837662337662337	89.69243557772236	21	1	methylated (>=50%)	Q6P4Y0	Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.8.4.5) (CDK5 regulatory subunit-associated protein 1-like 1) (tRNA-t(6)A37 methylthiotransferase)	NA	hit, no GO BP
GN012669	Chromosome_5A	555	1	18	37.47747747747748	0.9257714762301918	0.5851755526657998	18	0	0.5851755526657998	18	0	NA	NA	NA	0.8270972823946435	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012670	Chromosome_5A	327	1	12	42.813455657492355	0.8114143920595533	0.4077471967380224	12	0	0.4077471967380224	12	0	NA	NA	NA	0.6511627906976745	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012671	Chromosome_5A	793	3	34	40.22698612862547	1.0603271983640081	0.6906077348066298	34	0	0.6838905775075987	31	0	0.7575757575757576	3	0	0.5387484459179445	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012672	Chromosome_5A	9396	8	108	33.06726266496381	0.4216972311221373	90.5665492003253	107	1	92.71758436944938	35	1	89.9279310950958	72	1	75.56596409055426	16	0.875	methylated (>=50%)	Q6FLF3	ATP-dependent RNA helicase DBP2 (EC 3.6.4.13)	nuclear polyadenylation-dependent mRNA catabolic process [GO:0071042]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; rRNA processing [GO:0006364]; termination of RNA polymerase II transcription [GO:0006369]	hit with GO BP
GN012673	Chromosome_5A	6196	8	85	34.58683021304067	0.461387509089157	89.02164502164503	85	0.9294117647058824	92.39057239057239	29	0.9310344827586207	87.85547785547786	56	0.9285714285714286	24.57312546399406	26	0.19230769230769232	methylated (>=50%)	Q2KJC6	S-adenosylmethionine synthase isoform type-1 (AdoMet synthase 1) (EC 2.5.1.6) (Methionine adenosyltransferase 1) (MAT 1)	L-methionine catabolic process [GO:0009087]; S-adenosylmethionine biosynthetic process [GO:0006556]	hit with GO BP
GN012674	Chromosome_5A	354	1	13	42.3728813559322	0.843475073313783	1.2406947890818858	13	0	1.2406947890818858	13	0	NA	NA	NA	2.8071790151863785	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012675	Chromosome_5A	1548	4	28	38.372093023255815	0.5	90.2363184079602	28	1	91.2532637075718	27	1	69.73684210526316	1	1	85.40723981900453	19	1	methylated (>=50%)	E6ZHJ8	F-box/LRR-repeat protein 15	bone mineralization [GO:0030282]; dorsal/ventral pattern formation [GO:0009953]; G2/M transition of mitotic cell cycle [GO:0000086]; positive regulation of BMP signaling pathway [GO:0030513]; protein ubiquitination [GO:0016567]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN012676	Chromosome_5A	1221	1	29	41.6052416052416	0.560091743119266	93.09006211180125	29	1	93.09006211180125	29	1	NA	NA	NA	NA	NA	NA	methylated (>=50%)	Q4KWL2	Beta-2 adrenergic receptor (Beta-2 adrenoreceptor) (Beta-2 adrenoceptor)	adenylate cyclase-activating adrenergic receptor signaling pathway [GO:0071880]; adenylate cyclase-inhibiting adrenergic receptor signaling pathway [GO:0071881]; negative regulation of cardiac muscle cell apoptotic process [GO:0010667]; negative regulation of multicellular organismal process [GO:0051241]; norepinephrine-epinephrine-mediated vasodilation involved in regulation of systemic arterial blood pressure [GO:0002025]; positive regulation of autophagosome maturation [GO:1901098]; positive regulation of cardiac muscle cell apoptotic process [GO:0010666]; positive regulation of cardiac muscle cell contraction [GO:0106134]; positive regulation of lipophagy [GO:1904504]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of multicellular organismal process [GO:0051240]; regulation of developmental growth [GO:0048638]; regulation of smooth muscle contraction [GO:0006940]	hit with GO BP
GN012678	Chromosome_5A	7258	8	263	38.06833838523009	1.0003060363575385	0.5901155642980084	259	0	0.4455997029335314	78	0	0.6310475389145982	181	0	0.796812749003984	52	0	unmethylated (<10%)	Q9BQS2	Synaptotagmin-15 (Chr10Syt) (Synaptotagmin XV) (SytXV)	regulation of calcium ion-dependent exocytosis [GO:0017158]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN012679	Chromosome_5A	153	1	9	48.366013071895424	1.0058436815193572	0.746268656716418	9	0	0.746268656716418	9	0	NA	NA	NA	6.978021978021978	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012680	Chromosome_5A	433	2	4	44.34180138568129	0.19737891737891738	4.411764705882353	4	0	4.411764705882353	4	0	NA	NA	NA	1.1754068716094033	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012681	Chromosome_5A	234	1	12	44.44444444444444	1.0384615384615385	1.3440860215053763	12	0	1.3440860215053763	12	0	NA	NA	NA	2.051282051282051	52	0	unmethylated (<10%)	Q24292	Protein dachsous (Adherin)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc morphogenesis [GO:0007560]; negative regulation of hippo signaling [GO:0035331]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]	hit with GO BP
GN012682	Chromosome_5A	2184	4	36	35.66849816849817	0.5228424370586123	0.5698005698005698	34	0	0.7518796992481203	20	0	0.3838771593090211	14	0	0.5765534913516976	31	0	unmethylated (<10%)	Q9VEU1	Cadherin-89D	axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN012685	Chromosome_5A	9134	17	252	38.778191372892486	0.7351279673164038	0.7965175511716217	242	0	0.9054770318021201	117	0	0.7178178337852927	125	0	0.6836204539239814	79	0	unmethylated (<10%)	Q5THR3	EF-hand calcium-binding domain-containing protein 6 (CAP-binding protein complex-interacting protein 1) (DJ-1-binding protein) (DJBP)	androgen receptor signaling pathway [GO:0030521]; flagellated sperm motility [GO:0030317]; response to testosterone [GO:0033574]	hit with GO BP
GN012684	Chromosome_5A	19597	14	351	35.95448282900444	0.5548716608404936	62.94671517226621	349	0.5673352435530086	52.82700421940928	47	0.48936170212765956	64.41612547481927	302	0.5794701986754967	32.971451548049856	46	0.32608695652173914	methylated (>=50%)	Q3TIX9	Ubiquitin carboxyl-terminal hydrolase 39 (EC 3.4.19.12) (U4/U6.U5 tri-snRNP-associated 65 kDa protein)	mRNA splicing, via spliceosome [GO:0000398]; protein deubiquitination [GO:0016579]; spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN012683	Chromosome_5A	14168	4	282	34.874364765669114	0.6557248335321385	74.70755979747425	272	0.8382352941176471	51.574803149606296	7	0.7142857142857143	75.41229385307346	265	0.8415094339622642	60.88285878081406	69	0.5942028985507246	methylated (>=50%)	Q4V817	UPF0561 protein C2orf68 homolog	NA	hit, no GO BP
GN012687	Chromosome_5A	192	1	12	50.520833333333336	0.9804255319148936	1.4285714285714286	12	0	1.4285714285714286	12	0	NA	NA	NA	0.9692372524230931	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012688	Chromosome_5A	1693	4	47	38.865918487891314	0.7351348854397635	0.9228187919463087	25	0	6.0606060606060606	3	0	0.6216696269982238	22	0	0.6382978723404256	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012689	Chromosome_5A	19553	3	577	35.06367309364292	0.9610166669009138	1.0529979984335567	567	0	0.7281553398058253	39	0	1.0693069306930694	528	0	0.35816618911174786	55	0	unmethylated (<10%)	O97512	Neuromedin-K receptor (NKR) (NK-3 receptor) (NK-3R) (Neurokinin B receptor) (Tachykinin receptor 3)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; phospholipase C-activating tachykinin receptor signaling pathway [GO:0007209]; positive regulation of flagellated sperm motility [GO:1902093]	hit with GO BP
GN012690	Chromosome_5A	30176	10	538	34.59040296924709	0.6578618063299476	85.71698916591758	387	0.9534883720930233	76.8739105171412	33	0.9393939393939394	86.50082406262877	354	0.9548022598870056	10.304975922953451	75	0	methylated (>=50%)	Q3UIK4	N(6)-adenosine-methyltransferase non-catalytic subunit METTL14 (Methyltransferase-like protein 14)	forebrain radial glial cell differentiation [GO:0021861]; gliogenesis [GO:0042063]; mRNA destabilization [GO:0061157]; mRNA export from nucleus [GO:0006406]; mRNA modification [GO:0016556]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; mRNA stabilization [GO:0048255]; negative regulation of hematopoietic progenitor cell differentiation [GO:1901533]; positive regulation of translation [GO:0045727]; regulation of neuron differentiation [GO:0045664]; response to nutrient levels [GO:0031667]; RNA methylation [GO:0001510]; spermatogenesis [GO:0007283]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN012691	Chromosome_5A	5672	7	76	34.185472496473906	0.45986899656489366	81.66373755125952	75	0.9466666666666667	77.99811142587346	16	1	82.61939931068439	59	0.9322033898305084	41.40526976160602	9	0.3333333333333333	methylated (>=50%)	Q8TBZ9	Testis-expressed protein 47	NA	hit, no GO BP
GN012692	Chromosome_5A	993	1	20	40.483383685800604	0.5108024691358025	83.35866261398176	20	0.9	83.35866261398176	20	0.9	NA	NA	NA	91.19658119658119	16	1	methylated (>=50%)	Q09655	G patch domain and ankyrin repeat-containing protein 1 homolog	NA	hit, no GO BP
GN012693	Chromosome_5A	339	1	14	45.42772861356932	0.8016891891891892	0.35714285714285715	14	0	0.35714285714285715	14	0	NA	NA	NA	0.5800981704596162	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012694	Chromosome_5A	381	1	6	47.76902887139108	0.2761870242841609	NA	0	NA	NA	NA	NA	NA	NA	NA	1.8652849740932642	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012695	Chromosome_5A	411	1	18	42.092457420924575	1.0008116883116882	0.27726432532347506	18	0	0.27726432532347506	18	0	NA	NA	NA	1.2477718360071302	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012696	Chromosome_5A	702	1	33	41.452991452991455	1.0980187695516164	0.6194690265486725	33	0	0.6194690265486725	33	0	NA	NA	NA	0.5072463768115942	58	0	unmethylated (<10%)	P09241	Rhodopsin	visual perception [GO:0007601]	hit with GO BP
GN012697	Chromosome_5A	1424	2	47	36.306179775280896	1.0015863039118853	0.8733624454148472	47	0	0.9395184967704052	40	0	0.6814310051107325	7	0	0.468384074941452	39	0	unmethylated (<10%)	C3ZQF9	QRFP-like peptide receptor	cellular response to hormone stimulus [GO:0032870]; cellular response to peptide [GO:1901653]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN012706	Chromosome_5A	10587	2	333	35.37357136110324	1.0056253298153035	1.0842906931715504	329	0	0.9400705052878966	50	0	1.1020881670533642	279	0	0.7278835386338186	56	0	unmethylated (<10%)	C3ZQF9	QRFP-like peptide receptor	cellular response to hormone stimulus [GO:0032870]; cellular response to peptide [GO:1901653]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN002567	Chromosome_5A	424	1	6	44.339622641509436	0.3001769911504425	79.46428571428571	6	1	79.46428571428571	6	1	NA	NA	NA	91.03699843668578	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012705	Chromosome_5A	3492	2	91	41.72394043528064	0.6001903855306997	95.0531668978271	91	1	95.59822747415066	78	1	93.09245483528161	13	1	61.05263157894737	8	0.875	methylated (>=50%)	Q9CQ29	RING finger protein 151	NA	hit, no GO BP
GN012704	Chromosome_5A	15186	3	434	36.57315948900303	0.8571038430447226	1.7345040875470392	412	0	0.5913978494623656	57	0	1.8345171456794769	355	0	0.40434672731867577	68	0	unmethylated (<10%)	Q9UJA9	Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 (E-NPP 5) (NPP-5) (EC 3.1.-.-)	cell communication [GO:0007154]	hit with GO BP
GN012701	Chromosome_5A	5884	10	177	39.29299796057104	0.7794952398059997	1.526929483620211	177	0	1.4799154334038056	68	0	1.5499070055796653	109	0	0.8432349559218091	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012700	Chromosome_5A	7245	7	111	33.47135955831608	0.5482462419470293	85.78408562121918	111	0.9279279279279279	66.62049861495845	13	0.6923076923076923	87.54127508255017	98	0.9591836734693877	73.6321143799835	51	0.6078431372549019	methylated (>=50%)	Q3UJZ3	Armadillo repeat-containing protein 7	NA	hit, no GO BP
GN012699	Chromosome_5A	36911	22	514	33.98986751916773	0.48250164036154075	88.33402602384987	424	0.964622641509434	87.25852856555693	44	0.9318181818181818	88.42473826527075	380	0.968421052631579	71.66180758017492	48	0.6041666666666666	methylated (>=50%)	P54646	5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)	adiponectin-activated signaling pathway [GO:0033211]; cellular response to calcium ion [GO:0071277]; cellular response to glucose starvation [GO:0042149]; cellular response to glucose stimulus [GO:0071333]; cellular response to nutrient levels [GO:0031669]; cellular response to oxidative stress [GO:0034599]; energy homeostasis [GO:0097009]; fatty acid homeostasis [GO:0055089]; glucose homeostasis [GO:0042593]; lipid biosynthetic process [GO:0008610]; lipid droplet disassembly [GO:1905691]; negative regulation of apoptotic process [GO:0043066]; negative regulation of gene expression [GO:0010629]; negative regulation of hepatocyte apoptotic process [GO:1903944]; negative regulation of TOR signaling [GO:0032007]; negative regulation of TORC1 signaling [GO:1904262]; positive regulation of autophagy [GO:0010508]; positive regulation of glycolytic process [GO:0045821]; positive regulation of macroautophagy [GO:0016239]; positive regulation of protein localization [GO:1903829]; protein localization to lipid droplet [GO:1990044]; regulation of circadian rhythm [GO:0042752]; regulation of lipid metabolic process [GO:0019216]; regulation of macroautophagy [GO:0016241]; regulation of microtubule cytoskeleton organization [GO:0070507]; regulation of stress granule assembly [GO:0062028]; signal transduction [GO:0007165]	hit with GO BP
GN012698	Chromosome_5A	1078	3	36	41.37291280148423	0.7803897122403427	8.35820895522388	24	0	6.209150326797386	23	0	31.03448275862069	1	0	0.4655493482309125	91	0	unmethylated (<10%)	Q9H0W7	THAP domain-containing protein 2	NA	hit, no GO BP
GN012715	Chromosome_5A	480	1	8	44.791666666666664	0.35049288061336253	1.098901098901099	8	0	1.098901098901099	8	0	NA	NA	NA	4.754601226993865	13	0	unmethylated (<10%)	P81942	Glutathione S-transferase P 1 (EC 2.5.1.18) (BBGSTP1-1) (GST class-pi)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN012714	Chromosome_5A	207	1	9	49.75845410628019	0.7056818181818182	0.9803921568627451	7	0	0.9803921568627451	7	0	NA	NA	NA	0.5767844268204758	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012713	Chromosome_5A	876	1	45	46.00456621004566	0.975259772389906	0.5862646566164154	45	0	0.5862646566164154	45	0	NA	NA	NA	0.6274509803921569	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012712	Chromosome_5A	711	1	4	37.69338959212377	0.158953722334004	37.234042553191486	4	0	37.234042553191486	4	0	NA	NA	NA	88.35477318889642	27	0.9629629629629629	NA	NA	NA	NA	no Swiss-Prot hit
GN012711	Chromosome_5A	14464	9	287	34.257466814159294	0.6772496716671154	22.88199224127143	284	0.176056338028169	73.4472049689441	30	0.7	18.44970736354975	254	0.1141732283464567	82.80936454849498	21	1	sparse (10-50%)	Q9R1C6	Diacylglycerol kinase epsilon (DAG kinase epsilon) (EC 2.7.1.107) (Diglyceride kinase epsilon) (DGK-epsilon)	diacylglycerol metabolic process [GO:0046339]; glycerolipid metabolic process [GO:0046486]; intracellular signal transduction [GO:0035556]; lipid phosphorylation [GO:0046834]; modulation of chemical synaptic transmission [GO:0050804]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylinositol biosynthetic process [GO:0006661]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]	hit with GO BP
GN012710	Chromosome_5A	219	1	4	50.22831050228311	0.33900928792569657	7.03125	4	0	7.03125	4	0	NA	NA	NA	1.2177650429799427	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012709	Chromosome_5A	4651	5	148	38.249838744356055	0.8708261328299939	1.5739442106903538	146	0	1.9424460431654675	43	0	1.4720509250049731	103	0	0.5274588892336333	65	0	unmethylated (<10%)	A1L2K1	Meteorin-like protein	brown fat cell differentiation [GO:0050873]; energy homeostasis [GO:0097009]; negative regulation of inflammatory response [GO:0050728]; positive regulation of brown fat cell differentiation [GO:0090336]; response to cold [GO:0009409]; response to muscle activity [GO:0014850]	hit with GO BP
GN012708	Chromosome_5A	22123	21	363	36.39651041902093	0.49760965287188963	87.26572647986639	342	0.956140350877193	93.20987654320987	115	1	85.38358172489616	227	0.933920704845815	88.93212278426286	31	0.967741935483871	methylated (>=50%)	B2GUN4	Meiosis regulator and mRNA stability factor 1 (Limkain-b1) (Meiosis arrest female protein 1 homolog)	regulation of gene expression [GO:0010468]	hit with GO BP
GN012707	Chromosome_5A	9754	19	305	36.44658601599344	0.9416846036971385	0.5739649498737277	283	0	0.6393640919301884	144	0	0.521978021978022	139	0	2.3660403618649966	60	0	unmethylated (<10%)	A3KPQ7	Cell surface hyaluronidase (EC 3.2.1.35) (Cell migration-inducing hyaluronidase 2) (Protein frozen ventricle) (Protein wickham) (Transmembrane protein 2)	atrioventricular valve formation [GO:0003190]; cardiac muscle tissue morphogenesis [GO:0055008]; cell migration involved in heart formation [GO:0060974]; cell migration to the midline involved in heart development [GO:0003318]; embryonic heart tube morphogenesis [GO:0003143]; endocardial cushion development [GO:0003197]; heart looping [GO:0001947]; hyaluronan catabolic process [GO:0030214]; muscle attachment [GO:0016203]; muscle tissue morphogenesis [GO:0060415]; positive regulation of extracellular matrix assembly [GO:1901203]; positive regulation of vascular endothelial growth factor signaling pathway [GO:1900748]; regulation of sprouting angiogenesis [GO:1903670]; regulation of Wnt signaling pathway [GO:0030111]	hit with GO BP
GN012716	Chromosome_5A	426	1	21	46.478873239436616	0.9342105263157895	NA	0	NA	NA	NA	NA	NA	NA	NA	84.31372549019608	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN012717	Chromosome_5A	750	1	21	41.6	0.6603219855777294	1.0582010582010581	16	0	1.0582010582010581	16	0	NA	NA	NA	1.2476007677543186	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012718	Chromosome_5A	27843	22	190	39.57906834752002	0.17905653506411692	84.4071923581195	180	0.9388888888888889	95.24714828897338	53	1	80.86481113320079	127	0.9133858267716536	56.201550387596896	36	0.5277777777777778	methylated (>=50%)	Q8C4J7	Transducin beta-like protein 3	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000480]; endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000472]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN012719	Chromosome_5A	11514	10	108	36.71182907764461	0.27926267281105993	79.7873911117673	108	0.8518518518518519	71.8822618125484	25	0.76	81.6490331995622	83	0.8795180722891566	66.8359375	40	0.75	methylated (>=50%)	Q9CQT7	Desumoylating isopeptidase 1 (DeSI-1) (EC 3.4.-.-) (PPPDE peptidase domain-containing protein 2) (Palmitoyl protein thioesterase DESI1) (EC 3.1.2.22) (S-depalmitoylase DESI1)	protein desumoylation [GO:0016926]; protein export from nucleus [GO:0006611]; regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032434]	hit with GO BP
GN012720	Chromosome_5A	16899	12	231	34.901473459968045	0.4524167640186916	80.62935540069687	230	0.908695652173913	85.90747330960853	36	0.9444444444444444	80.19218298650003	194	0.9020618556701031	57.015810276679844	36	0.6388888888888888	methylated (>=50%)	Q6P1R4	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like (EC 1.3.1.88) (tRNA-dihydrouridine synthase 1-like)	tRNA dihydrouridine synthesis [GO:0002943]	hit with GO BP
GN012721	Chromosome_5A	38445	22	443	37.1881909220965	0.3334844519662836	88.75273036910887	440	0.9863636363636363	92.33058608058609	83	1	88.06253588305437	357	0.9831932773109243	32.900432900432904	9	0.4444444444444444	methylated (>=50%)	Q29466	V-type proton ATPase 116 kDa subunit a 1 (V-ATPase 116 kDa subunit a 1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar adenosine triphosphatase subunit Ac116) (Vacuolar proton pump subunit 1) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1)	pH reduction [GO:0045851]; proton transmembrane transport [GO:1902600]; vacuolar acidification [GO:0007035]	hit with GO BP
GN012722	Chromosome_5A	14823	14	207	35.62706604600958	0.4467048330163966	84.72732843137256	203	0.8817733990147784	85.19685039370079	33	0.9090909090909091	84.64711685050668	170	0.8764705882352941	0.532150776053215	56	0	methylated (>=50%)	Q6NRT5	COP9 signalosome complex subunit 1 (Signalosome subunit 1)	NA	hit, no GO BP
GN012723	Chromosome_5A	1473	1	87	47.1826205023761	1.0706015037593986	0.6636038795303726	87	0	0.6636038795303726	87	0	NA	NA	NA	0.7884362680683311	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012724	Chromosome_5A	19450	8	448	41.94858611825193	0.5236046323530649	83.61253241746688	342	0.935672514619883	89.4134477825465	65	0.9538461538461539	82.61298274445357	277	0.9314079422382672	0.8603941160144324	57	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012726	Chromosome_5A	1449	1	50	41.821946169772254	0.7941205484857453	0.4384042086804033	50	0	0.4384042086804033	50	0	NA	NA	NA	0.7859163784973279	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012727	Chromosome_5A	1597	3	74	48.34063869755792	0.9055785440613027	1.1349306431273645	53	0	1.557632398753894	38	0	0.847457627118644	15	0	0.5418218760582458	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012728	Chromosome_5A	1007	4	42	48.65938430983118	0.7132690232056125	0.26007802340702213	33	0	0.2932551319648094	30	0	0	3	0	0.7871536523929471	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012729	Chromosome_5A	744	1	29	38.44086021505376	1.083132530120482	0.7738095238095238	29	0	0.7738095238095238	29	0	NA	NA	NA	0.45045045045045046	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012730	Chromosome_5A	15005	10	435	37.094301899366876	0.8449189976502898	0.6552322220080941	435	0	0.7186081694402421	81	0	0.6459805653710248	354	0	0.4106776180698152	61	0	unmethylated (<10%)	Q8NFZ3	Neuroligin-4, Y-linked (Neuroligin Y)	learning [GO:0007612]; neuron cell-cell adhesion [GO:0007158]; presynapse assembly [GO:0099054]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; vocalization behavior [GO:0071625]	hit with GO BP
GN012731	Chromosome_5A	3612	5	107	37.09856035437431	0.8629263456849664	0.5379557680812911	107	0	0.6398537477148081	29	0	0.5095541401273885	78	0	0.4789599726308587	63	0	unmethylated (<10%)	Q6UWM5	GLIPR1-like protein 1	fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]	hit with GO BP
GN012732	Chromosome_5A	18166	29	521	36.816029946053064	0.8463782522721549	0.6070058592926696	502	0	0.5091001654575538	178	0	0.6554897264590949	324	0	1.0695187165775402	42	0	unmethylated (<10%)	Q5R7Y0	Adhesion G protein-coupled receptor B2 (Brain-specific angiogenesis inhibitor 2)	calcineurin-NFAT signaling cascade [GO:0033173]; cell surface receptor signaling pathway [GO:0007166]; G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of angiogenesis [GO:0016525]	hit with GO BP
GN012733	Chromosome_5A	378	1	22	43.91534391534392	1.2099519860323003	2.1454112038140645	22	0	2.1454112038140645	22	0	NA	NA	NA	0.43431053203040176	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012734	Chromosome_5A	1476	2	59	39.70189701897019	1.0191342204121756	0.49527239981990095	59	0	0.5913978494623656	52	0	0	7	0	0.7754442649434572	82	0	unmethylated (<10%)	Q9JKF8	Dexamethasone-induced Ras-related protein 1	cellular response to nitric oxide [GO:0071732]; intracellular signaling cassette [GO:0141124]; negative regulation of DNA-templated transcription [GO:0045892]; NMDA selective glutamate receptor signaling pathway [GO:0098989]; signal transduction [GO:0007165]	hit with GO BP
GN012735	Chromosome_5A	10193	15	199	38.369469243598544	0.530826510039715	85.02406684224866	191	0.8952879581151832	84.21905379131562	68	0.8382352941176471	85.33753943217665	123	0.926829268292683	27.225939269171384	43	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012736	Chromosome_5A	7486	6	116	37.51001870157628	0.44056585154996303	89.48317307692308	103	1	94.21686746987952	15	1	88.80878819086853	88	1	72.93388429752066	18	0.8333333333333334	methylated (>=50%)	Q9DDJ0	SUMO-conjugating enzyme UBC9-B (EC 2.3.2.-) (RING-type E3 SUMO transferase UBC9-B) (SUMO-protein ligase B) (Ubiquitin carrier protein 9-B) (Ubiquitin carrier protein I-B) (Ubiquitin-conjugating enzyme E2 I-B) (Ubiquitin-protein ligase I-B)	definitive hemopoiesis [GO:0060216]; embryonic heart tube elongation [GO:0036306]; heart looping [GO:0001947]; protein sumoylation [GO:0016925]	hit with GO BP
GN012737	Chromosome_5A	22211	14	355	34.56845707082076	0.543978932687367	89.11956088707892	355	0.9774647887323944	87.920384351407	53	0.9622641509433962	89.29714895563347	302	0.9801324503311258	67.40987705772037	67	0.7014925373134329	methylated (>=50%)	Q6NUQ1	RAD50-interacting protein 1 (RAD50 interactor 1) (HsRINT-1) (RINT-1)	mitotic G2 DNA damage checkpoint signaling [GO:0007095]; regulation of ER to Golgi vesicle-mediated transport [GO:0060628]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN012738	Chromosome_5A	10246	7	139	36.51180948662893	0.40751056407345176	73.99753238741518	135	0.8962962962962963	76.3157894736842	18	0.8333333333333334	73.65439093484419	117	0.905982905982906	42.61789334508594	32	0.53125	methylated (>=50%)	Q1JP75	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (DCXR)	glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]	hit with GO BP
GN012739	Chromosome_5A	16361	10	241	34.906179328891874	0.4848497703880937	81.76723576176202	234	0.9529914529914529	87.21719457013575	14	1	81.43410316692021	220	0.95	79.25196850393701	28	0.9642857142857143	methylated (>=50%)	G3V8Y7	AP-4 complex accessory subunit Tepsin (ENTH domain-containing protein 2) (Tetra-epsin)	NA	hit, no GO BP
GN012740	Chromosome_5A	5527	5	75	34.6299981907002	0.45261726939203356	85.2464980898672	75	0.96	78.32167832167832	6	1	85.62655920168874	69	0.9565217391304348	58.54255970606246	42	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012741	Chromosome_5A	14151	5	486	36.9938520245919	1.0058334186471665	0.532609787961009	455	0	0.8605851979345955	30	0	0.512273212379936	425	0	1.0160880609652836	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012742	Chromosome_5A	41180	29	646	37.45750364254492	0.4513096136961339	88.69077197392652	644	0.968944099378882	94.87721343729505	327	1	84.54705193283874	317	0.9369085173501577	7.665153807362582	36	0.05555555555555555	methylated (>=50%)	Q9BYK8	3'-5' exoribonuclease HELZ2 (EC 3.1.13.1) (ATP-dependent RNA helicase PRIC285) (EC 5.6.2.6) (Helicase with zinc finger 2, transcriptional coactivator) (Helicase with zinc finger domain 2) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DNA-binding domain-interacting protein 1) (PDIP1) (PPAR-gamma DBD-interacting protein 1) (Peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein)	positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of lipid metabolic process [GO:0019216]	hit with GO BP
GN012743	Chromosome_5A	8740	10	104	33.7070938215103	0.4212344891762534	95.06374147643048	104	1	95.31568228105907	30	1	94.99336241228902	74	1	17.171717171717173	36	0.1388888888888889	methylated (>=50%)	Q8BMA6	Signal recognition particle subunit SRP68 (SRP68) (Signal recognition particle 68 kDa protein)	response to xenobiotic stimulus [GO:0009410]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	hit with GO BP
GN012744	Chromosome_5A	1105	3	37	41.1764705882353	0.7916392363396971	0.3561253561253561	37	0	0.23809523809523808	21	0	0.5319148936170213	16	0	2.1839434020301445	79	0	unmethylated (<10%)	Q5PPN5	Tubulin polymerization-promoting protein family member 3	decidualization [GO:0046697]; embryo implantation [GO:0007566]; microtubule bundle formation [GO:0001578]; microtubule polymerization [GO:0046785]; positive regulation of protein polymerization [GO:0032273]	hit with GO BP
GN012747	Chromosome_5A	498	1	23	47.18875502008032	0.8330181818181818	1.6494845360824741	23	0	1.6494845360824741	23	0	NA	NA	NA	0.3042155584528466	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012748	Chromosome_5A	303	1	9	41.584158415841586	0.6983354673495519	1.4326647564469914	9	0	1.4326647564469914	9	0	NA	NA	NA	2.1750663129973473	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012749	Chromosome_5A	33843	13	903	35.36329521614514	0.853928518168213	1.8465909090909092	894	0	3.269586674892042	74	0	1.7463834223901995	820	0	1.4846235418875928	77	0	unmethylated (<10%)	P00516	cGMP-dependent protein kinase 1 (cGK 1) (cGK1) (EC 2.7.11.12) (cGMP-dependent protein kinase I) (cGKI)	negative regulation of platelet aggregation [GO:0090331]; signal transduction [GO:0007165]	hit with GO BP
GN012750	Chromosome_5A	546	2	4	44.13919413919414	0.15072463768115943	54.83870967741935	4	0.75	58.58585858585859	3	1	48.214285714285715	1	0	14.069264069264069	6	0.16666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN012751	Chromosome_5A	1841	5	61	41.010320478001084	0.7935681275350849	0.6003001500750376	59	0	0.6869479882237488	35	0	0.5102040816326531	24	0	1.6373801916932906	86	0	unmethylated (<10%)	Q2KIR0	Protein SPMIP2	NA	hit, no GO BP
GN012757	Chromosome_5A	1158	1	55	46.286701208981	0.88719563158188	0.5259203606311045	55	0	0.5259203606311045	55	0	NA	NA	NA	0.6752411575562701	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012756	Chromosome_5A	456	1	24	48.68421052631579	0.8987435328898744	0	13	0	0	13	0	NA	NA	NA	2.389803505045141	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012755	Chromosome_5A	546	1	0	43.040293040293044	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7481296758104738	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017622	Chromosome_5A	178	1	1	43.82022471910113	0.15344827586206897	0	1	0	0	1	0	NA	NA	NA	0.5030743432084964	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012754	Chromosome_5A	44379	28	847	36.73359021158656	0.5688720134059367	33.313634644478064	805	0.3590062111801242	37.98337549692808	66	0.3787878787878788	32.986822470091305	739	0.3572395128552097	9.154013015184383	30	0.1	sparse (10-50%)	P08133	Annexin A6 (67 kDa calelectrin) (Annexin VI) (Annexin-6) (Calphobindin-II) (CPB-II) (Chromobindin-20) (Lipocortin VI) (Protein III) (p68) (p70)	apoptotic signaling pathway [GO:0097190]; calcium ion transport [GO:0006816]; mitochondrial calcium ion homeostasis [GO:0051560]; monoatomic ion transmembrane transport [GO:0034220]	hit with GO BP
GN012753	Chromosome_5A	8357	6	99	33.94758884767261	0.4261026177708467	81.23066905420804	99	0.9393939393939394	86.90058479532163	18	0.9444444444444444	80.31391830559758	81	0.9382716049382716	22.83397353819889	31	0.25806451612903225	methylated (>=50%)	Q9UPM9	B9 domain-containing protein 1 (MKS1-related protein 1)	cilium assembly [GO:0060271]; protein localization to ciliary transition zone [GO:1904491]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN012752	Chromosome_5A	632	2	12	38.449367088607595	0.5176085176085176	92.8125	12	1	87.64940239043824	6	1	96.1439588688946	6	1	91.4828431372549	35	0.9142857142857143	methylated (>=50%)	Q9P0S9	Transmembrane protein 14C	heme biosynthetic process [GO:0006783]	hit with GO BP
GN012761	Chromosome_5A	18197	7	260	35.95098093092268	0.4421942281709581	64.36865021770681	258	0.7015503875968992	77.8053316800992	31	0.8709677419354839	62.35981091852813	227	0.6784140969162996	1.4571331751948493	43	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012760	Chromosome_5A	26485	27	316	34.4081555597508	0.4057501184390901	78.89311913826725	313	0.8977635782747604	90.9314933464761	69	0.9710144927536232	76.09839816933638	244	0.8770491803278688	95.84282460136674	34	1	methylated (>=50%)	Q5PQN1	Probable E3 ubiquitin-protein ligase HERC4 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 4) (HECT-type E3 ubiquitin transferase HERC4)	negative regulation of smoothened signaling pathway [GO:0045879]; protein ubiquitination [GO:0016567]; spermatogenesis [GO:0007283]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN012759	Chromosome_5A	16726	7	288	35.112997728088004	0.5591155526925152	28.131966116807845	287	0.2682926829268293	26.875	79	0.16455696202531644	28.29065346818736	208	0.3076923076923077	0.642791551882461	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012758	Chromosome_5A	2962	3	43	36.394328156650914	0.44059541229499405	90.70762052877139	43	1	91.15789473684211	24	1	90.44389642416769	19	1	65.58956916099773	26	0.5384615384615384	methylated (>=50%)	Q8R010	Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (Multisynthase complex auxiliary component p38) (Protein JTV-1)	negative regulation of cell population proliferation [GO:0008285]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of protein ubiquitination [GO:0031398]; protein-containing complex assembly [GO:0065003]; type II pneumocyte differentiation [GO:0060510]	hit with GO BP
GN012762	Chromosome_5A	20879	23	365	38.665644906365245	0.472077799312849	91.27165903206533	350	0.9371428571428572	88.82932302705399	183	0.8852459016393442	92.8956312691702	167	0.9940119760479041	0.6335282651072125	38	0	methylated (>=50%)	Q12830	Nucleosome-remodeling factor subunit BPTF (Bromodomain and PHD finger-containing transcription factor) (Fetal Alz-50 clone 1 protein) (Fetal Alzheimer antigen)	brain development [GO:0007420]; cellular response to nerve growth factor stimulus [GO:1990090]; chromatin remodeling [GO:0006338]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN012763	Chromosome_5A	3671	4	32	35.38545355488968	0.2816939235528272	77.94322940902745	32	0.90625	88.6056971514243	12	1	73.14439946018894	20	0.85	81.75232838909969	68	1	methylated (>=50%)	Q8TBF5	GPI alpha-1,4-mannosyltransferase I, stabilizing subunit (Phosphatidylinositol-glycan biosynthesis class X protein) (PIG-X)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN012764	Chromosome_5A	4169	8	53	31.662269129287598	0.5148112767940354	81.19090212113468	53	0.8679245283018868	85.44395924308589	8	0.875	80.28518288902666	45	0.8666666666666667	48.06243272335845	28	0.6071428571428571	methylated (>=50%)	Q6GMA4	Charged multivesicular body protein 6-A (Chromatin-modifying protein 6-A)	late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; nuclear membrane reassembly [GO:0031468]; vesicle budding from membrane [GO:0006900]	hit with GO BP
GN012765	Chromosome_5A	4793	4	57	32.56832881285207	0.44907194329747785	75.62337179010048	40	0.75	55.61224489795919	8	0.625	81.22915674130539	32	0.78125	65.10164569215875	20	0.75	methylated (>=50%)	Q3T0W7	Ubiquitin-like protein ATG12 (Autophagy-related protein 12) (APG12-like)	autophagosome assembly [GO:0000045]; autophagosome maturation [GO:0097352]; autophagy of mitochondrion [GO:0000422]; glycophagy [GO:0061723]; piecemeal microautophagy of the nucleus [GO:0034727]	hit with GO BP
GN012766	Chromosome_5A	4019	11	60	38.09405324707639	0.4136050221261706	70.25078369905957	60	0.8	76.89207344379759	44	0.8636363636363636	54.754440961337515	16	0.625	0.5844535359438925	75	0	methylated (>=50%)	F1SS88	Cilia- and flagella-associated protein 52 (WD repeat-containing protein 16)	establishment of left/right asymmetry [GO:0061966]; flagellated sperm motility [GO:0030317]	hit with GO BP
GN012767	Chromosome_5A	14569	9	242	36.316837119912144	0.5051314055890715	87.09345409633595	226	0.8982300884955752	76.09710550887021	54	0.7037037037037037	88.98809523809524	172	0.9593023255813954	0.7176175098672407	36	0	methylated (>=50%)	P85037	Forkhead box protein K1 (Myocyte nuclear factor) (MNF)	canonical glycolysis [GO:0061621]; intracellular glucose homeostasis [GO:0001678]; negative regulation of autophagy [GO:0010507]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of glucose metabolic process [GO:0010906]; regulation of transcription by RNA polymerase II [GO:0006357]; response to starvation [GO:0042594]	hit with GO BP
GN012768	Chromosome_5A	4242	6	57	40.00471475719	0.3381157340985175	71.87627187627187	54	0.6296296296296297	68.46153846153847	36	0.5833333333333334	79.40026075619296	18	0.7222222222222222	37.03256936067551	26	0.38461538461538464	methylated (>=50%)	Q5PPV2	Tektin-4	cilium assembly [GO:0060271]; cilium movement involved in cell motility [GO:0060294]	hit with GO BP
GN012769	Chromosome_5A	7601	11	65	36.00841994474411	0.2677275737210646	86.6650932263394	65	0.9846153846153847	90.93167701863354	25	1	84.05024743052913	40	0.975	88.69047619047619	21	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012770	Chromosome_5A	20429	17	264	37.304811787165306	0.3756297576582209	86.86756438750163	263	0.9277566539923955	94.24501424501425	101	1	82.9961128276687	162	0.8827160493827161	84.91803278688525	17	1	methylated (>=50%)	Q80YR5	Scaffold attachment factor B2 (SAF-B2)	regulation of androgen receptor signaling pathway [GO:0060765]; Sertoli cell differentiation [GO:0060008]	hit with GO BP
GN012771	Chromosome_5A	36179	11	237	35.89375051825645	0.23236163051608077	83.87884386960539	215	0.9488372093023256	69.92611907866146	44	0.75	86.3767213880028	171	1	44.327639071397286	32	0.5	methylated (>=50%)	Q6P4T1	Sorting nexin-19	chondrocyte differentiation [GO:0002062]; dense core granule maturation [GO:1990502]; insulin secretion [GO:0030073]	hit with GO BP
GN012772	Chromosome_5A	792	2	37	46.21212121212121	0.8991991162662248	1.3333333333333333	32	0	1.4204545454545454	29	0	0	3	0	0.6679389312977099	47	0	unmethylated (<10%)	Q3MHR5	Serine/arginine-rich splicing factor 2 (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)	regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN012773	Chromosome_5A	896	2	40	45.200892857142854	0.8916753744339951	5.0602409638554215	40	0.025	5.276705276705277	38	0.02631578947368421	1.8867924528301887	2	0	0.7107320540156361	66	0	unmethylated (<10%)	P30352	Serine/arginine-rich splicing factor 2 (Protein PR264) (Splicing component, 35 kDa) (Splicing factor SC35) (SC-35) (Splicing factor, arginine/serine-rich 2)	regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN012774	Chromosome_5A	20861	7	340	35.25238483294185	0.5247425981429661	83.82637414484549	329	0.9544072948328267	87.79826464208243	39	1	83.44788383029301	290	0.9482758620689655	81.90335305719921	25	0.84	methylated (>=50%)	A2VDL9	Transmembrane protein 184B	NA	hit, no GO BP
GN012775	Chromosome_5A	1337	3	31	43.90426327599103	0.4816506298517176	90.17027863777089	31	1	94.62989840348331	23	1	85.07462686567165	8	1	84.98542274052478	11	1	methylated (>=50%)	Q05A80	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)	negative regulation of cell growth [GO:0030308]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN012776	Chromosome_5A	18881	17	299	36.15804247656374	0.48945932847176044	92.61627589222277	299	1	94.90848585690516	69	1	92.16583834684802	230	1	94.1331575477917	18	1	methylated (>=50%)	P51892	DNA ligase 1 (EC 6.5.1.1) (DNA ligase I) (Polydeoxyribonucleotide synthase [ATP] 1)	DNA biosynthetic process [GO:0071897]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; lagging strand elongation [GO:0006273]; Okazaki fragment processing involved in mitotic DNA replication [GO:1903461]	hit with GO BP
GN012777	Chromosome_5A	1146	1	62	48.08027923211169	0.9485235221872164	1.0962241169305724	62	0	1.0962241169305724	62	0	NA	NA	NA	0.42628774422735344	60	0	unmethylated (<10%)	P50616	Protein Tob1 (Transducer of erbB-2 1)	negative regulation of cell population proliferation [GO:0008285]; negative regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060212]; negative regulation of translation [GO:0017148]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; regulation of gene expression [GO:0010468]	hit with GO BP
GN012778	Chromosome_5A	15012	8	177	35.14521715960565	0.38202740548497893	80.47013227736119	175	0.96	74.57072771872444	25	0.92	81.14784895735488	150	0.9666666666666667	51.27850725639254	18	0.6111111111111112	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012779	Chromosome_5A	14530	20	187	33.275980729525124	0.46515215012456057	88.53071712216772	182	0.9505494505494505	86.81232930159969	46	0.9130434782608695	88.9591439688716	136	0.9632352941176471	54.80237154150198	71	0.6619718309859155	methylated (>=50%)	A1L1L6	Mitochondrial Rho GTPase (MIRO-1) (EC 3.6.5.-) (Ras homolog gene family member T1)	antiviral innate immune response [GO:0140374]; cellular homeostasis [GO:0019725]; establishment of mitochondrion localization by microtubule attachment [GO:0034640]; free ubiquitin chain polymerization [GO:0010994]; mitochondrial outer membrane permeabilization [GO:0097345]; mitochondrion transport along microtubule [GO:0047497]; positive regulation of interferon-beta production [GO:0032728]; protein homooligomerization [GO:0051260]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of innate immune response [GO:0045088]; regulation of mitochondrion organization [GO:0010821]; regulation of neurotransmitter secretion [GO:0046928]; regulation of organelle transport along microtubule [GO:1902513]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN012780	Chromosome_5A	3873	4	32	33.35915311128324	0.2989204364562531	65.53141514973576	32	0.5625	92	8	1	58.68440502586844	24	0.4166666666666667	81.25925925925925	29	1	methylated (>=50%)	Q9BTW9	Tubulin-specific chaperone D (Beta-tubulin cofactor D) (tfcD) (SSD-1) (Tubulin-folding cofactor D)	adherens junction assembly [GO:0034333]; bicellular tight junction assembly [GO:0070830]; cell morphogenesis involved in neuron differentiation [GO:0048667]; microtubule cytoskeleton organization [GO:0000226]; mitotic cell cycle [GO:0000278]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of microtubule polymerization [GO:0031115]; post-chaperonin tubulin folding pathway [GO:0007023]; protein folding [GO:0006457]; tubulin complex assembly [GO:0007021]	hit with GO BP
GN012781	Chromosome_5A	456	1	27	45.39473684210526	1.196268946754761	0.23391812865497075	27	0	0.23391812865497075	27	0	NA	NA	NA	0.34587116299178555	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012787	Chromosome_5A	461	2	5	39.04555314533623	0.28629983852937524	66.73267326732673	5	1	63.56968215158924	4	1	80.20833333333333	1	1	49.41775836972344	10	0.5	methylated (>=50%)	P42125	Enoyl-CoA delta isomerase 1, mitochondrial (EC 5.3.3.8) (3,2-trans-enoyl-CoA isomerase) (Delta(3),Delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (Dodecenoyl-CoA isomerase)	fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN012783	Chromosome_5A	12547	11	201	36.74185064158763	0.4772075618362924	73.11745052685684	197	0.8274111675126904	67.27034120734908	51	0.7647058823529411	75.95065496629785	146	0.8493150684931506	87.23266364225535	33	0.9090909090909091	methylated (>=50%)	Q9D1P2	Histone acetyltransferase KAT8 (EC 2.3.1.48) (Lysine acetyltransferase 8) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 1) (MYST-1) (Males-absent on the first protein homolog) (mMof) (Protein acetyltransferase KAT8) (EC 2.3.1.-) (Protein propionyltransferase KAT8) (EC 2.3.1.-)	dosage compensation by inactivation of X chromosome [GO:0009048]; epithelial to mesenchymal transition [GO:0001837]; membraneless organelle assembly [GO:0140694]; myeloid cell differentiation [GO:0030099]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of epithelial to mesenchymal transition [GO:0010719]; negative regulation of type I interferon production [GO:0032480]; neurogenesis [GO:0022008]; oogenesis [GO:0048477]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial to mesenchymal transition [GO:0010718]; positive regulation of skeletal muscle satellite cell differentiation [GO:1902726]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; positive regulation of type I interferon production [GO:0032481]; post-embryonic hemopoiesis [GO:0035166]; regulation of autophagy [GO:0010506]; regulation of mitochondrial transcription [GO:1903108]; regulation of mRNA processing [GO:0050684]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN012782	Chromosome_5A	6127	3	41	33.18100212175616	0.24338226033037832	86.85840707964601	41	1	89.84126984126983	13	1	85.70552147239263	28	1	93.84416702539819	33	1	methylated (>=50%)	Q6AI12	Ankyrin repeat domain-containing protein 40	NA	hit, no GO BP
GN012790	Chromosome_5A	336	1	12	55.654761904761905	0.48695652173913045	0.5347593582887701	12	0	0.5347593582887701	12	0	NA	NA	NA	0.7109004739336493	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012792	Chromosome_5A	285	1	13	42.10526315789474	1.0433680653337087	0.6730769230769231	13	0	0.6730769230769231	13	0	NA	NA	NA	0.6942658781177681	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012791	Chromosome_5A	5427	10	126	36.68693569191082	0.6913795195340937	3.799514955537591	122	0	5.551291890509082	55	0	2.655754133956907	67	0	0.5039899202015959	47	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN012795	Chromosome_5A	24237	8	629	36.43602756116681	0.7819485891140147	0.7595196551370215	593	0	0.37641154328732745	73	0	0.7936507936507936	520	0	0.39568345323741005	60	0	unmethylated (<10%)	Q9Z306	Solute carrier family 22 member 4 (Organic cation/carnitine transporter 1) (Octn1)	acetylcholine uptake [GO:0051630]; amino acid import across plasma membrane [GO:0089718]; carnitine metabolic process [GO:0009437]; carnitine transport [GO:0015879]; lactation [GO:0007595]; liver regeneration [GO:0097421]; quaternary ammonium group transport [GO:0015697]; response to exogenous dsRNA [GO:0043330]; response to lipopolysaccharide [GO:0032496]; response to vitamin D [GO:0033280]; sodium-independent organic anion transport [GO:0043252]; sulfur amino acid transport [GO:0000101]; triglyceride metabolic process [GO:0006641]; xenobiotic transport [GO:0042908]	hit with GO BP
GN012796	Chromosome_5A	11723	10	147	38.147231937217434	0.34513006357729165	88.24838898652607	147	0.9727891156462585	93.42023587833644	46	1	87.04506065857886	101	0.9603960396039604	91.2209889001009	26	1	methylated (>=50%)	A7E305	Zinc finger SWIM domain-containing protein 8	positive regulation of miRNA catabolic process [GO:2000627]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN012797	Chromosome_5A	16368	15	218	35.728250244379275	0.41917329601421527	73.9876726222985	217	0.783410138248848	64.2508937276568	65	0.6	77.06365503080082	152	0.8618421052631579	69.72915560276155	33	0.6666666666666666	methylated (>=50%)	A7E2V4	Zinc finger SWIM domain-containing protein 8	positive regulation of miRNA catabolic process [GO:2000627]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; protein ubiquitination [GO:0016567]; target-directed miRNA degradation [GO:0140958]	hit with GO BP
GN012798	Chromosome_5A	5864	4	110	36.903137789904505	0.5538535513119934	91.43445218492717	110	1	93.6127744510978	18	1	91.02371095220172	92	1	92.10413999146394	39	1	methylated (>=50%)	P62265	Small ribosomal subunit protein uS11 (40S ribosomal protein S14)	cytoplasmic translation [GO:0002181]; erythrocyte differentiation [GO:0030218]; negative regulation of transcription by RNA polymerase II [GO:0000122]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN012799	Chromosome_5A	14644	7	137	36.77273968860967	0.276847345837978	62.0398406374502	137	0.7445255474452555	62.95133437990581	30	0.8	61.80763847230554	107	0.7289719626168224	70.50395256916995	37	0.8108108108108109	methylated (>=50%)	P51688	N-sulphoglucosamine sulphohydrolase (EC 3.10.1.1) (Sulfoglucosamine sulfamidase) (Sulphamidase)	glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]	hit with GO BP
GN012800	Chromosome_5A	11074	16	98	35.24471735596894	0.2888574812685485	80.28994447871685	98	0.9387755102040817	87.25160501375726	53	1	73.20261437908496	45	0.8666666666666667	83.98835516739447	11	0.9090909090909091	methylated (>=50%)	Q5ZI11	Leucine-rich repeat-containing protein 45	NA	hit, no GO BP
GN012801	Chromosome_5A	2167	4	31	34.28703276419012	0.48838240639767355	24.55456570155902	31	0.12903225806451613	34.20724094881398	15	0.2	16.78391959798995	16	0.0625	5.583972719522592	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012802	Chromosome_5A	3090	4	106	40.80906148867314	0.8242612752721618	1.049398515485027	106	0	0.9711779448621554	94	0	1.3986013986013985	12	0	1.6880093131548313	55	0	unmethylated (<10%)	Q8ZXT3	Uncharacterized protein PAE1111	NA	hit, no GO BP
GN012803	Chromosome_5A	7841	14	88	34.90626195638311	0.372140484100617	47.11668273866924	88	0.5909090909090909	55.48172757475083	43	0.7674418604651163	39.863161685271876	45	0.4222222222222222	2.32454179704962	33	0	sparse (10-50%)	P35951	Low-density lipoprotein receptor (LDL receptor)	amyloid-beta clearance [GO:0097242]; amyloid-beta clearance by cellular catabolic process [GO:0150094]; artery development [GO:0060840]; artery morphogenesis [GO:0048844]; cellular response to fatty acid [GO:0071398]; cellular response to low-density lipoprotein particle stimulus [GO:0071404]; cholesterol homeostasis [GO:0042632]; cholesterol import [GO:0070508]; cholesterol metabolic process [GO:0008203]; cholesterol transport [GO:0030301]; endocytosis [GO:0006897]; high-density lipoprotein particle clearance [GO:0034384]; intestinal cholesterol absorption [GO:0030299]; lipid metabolic process [GO:0006629]; lipoprotein catabolic process [GO:0042159]; lipoprotein metabolic process [GO:0042157]; long-term memory [GO:0007616]; low-density lipoprotein particle clearance [GO:0034383]; negative regulation of amyloid fibril formation [GO:1905907]; negative regulation of astrocyte activation [GO:0061889]; negative regulation of gene expression [GO:0010629]; negative regulation of low-density lipoprotein particle clearance [GO:0010989]; negative regulation of microglial cell activation [GO:1903979]; negative regulation of protein metabolic process [GO:0051248]; negative regulation of receptor recycling [GO:0001920]; phagocytosis [GO:0006909]; phospholipid transport [GO:0015914]; plasma lipoprotein particle clearance [GO:0034381]; positive regulation of gene expression [GO:0010628]; positive regulation of inflammatory response [GO:0050729]; positive regulation of lysosomal protein catabolic process [GO:1905167]; positive regulation of triglyceride biosynthetic process [GO:0010867]; positive regulation of triglyceride catabolic process [GO:0010898]; receptor-mediated endocytosis [GO:0006898]; receptor-mediated endocytosis involved in cholesterol transport [GO:0090118]; regulation of cholesterol metabolic process [GO:0090181]; regulation of phosphatidylcholine catabolic process [GO:0010899]; regulation of protein metabolic process [GO:0051246]; response to caloric restriction [GO:0061771]; retinoid metabolic process [GO:0001523]	hit with GO BP
GN012804	Chromosome_5A	30901	16	387	36.018251836510146	0.3865209796628857	86.05141549643322	350	0.9742857142857143	90.14238773274919	33	1	85.68636074866833	317	0.9716088328075709	87.77120315581854	22	1	methylated (>=50%)	Q3UNX5	Acyl-coenzyme A synthetase ACSM3, mitochondrial (EC 6.2.1.2) (Acyl-CoA synthetase medium-chain family member 3) (Butyrate--CoA ligase 3) (Butyryl-coenzyme A synthetase 3) (Middle-chain acyl-CoA synthetase 3) (Propionate--CoA ligase) (EC 6.2.1.17) (Protein SA homolog)	acyl-CoA metabolic process [GO:0006637]; fatty acid biosynthetic process [GO:0006633]	hit with GO BP
GN012805	Chromosome_5A	4950	3	126	36.2020202020202	0.7779456099145968	1.5362106803218727	126	0	0.06934812760055478	24	0	1.849112426035503	102	0	0.3476749239461104	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012809	Chromosome_5A	12791	10	202	35.96278633414119	0.49306266794217324	85.31041683398924	201	0.845771144278607	90.57315233785822	47	0.851063829787234	83.88611082763548	154	0.8441558441558441	0.5303476723629935	32	0	methylated (>=50%)	Q3SX41	Luc7-like protein 3 (Cisplatin resistance-associated-overexpressed protein)	mRNA splice site recognition [GO:0006376]; RNA splicing [GO:0008380]	hit with GO BP
GN012808	Chromosome_5A	21838	14	353	35.9739902921513	0.5022883372727659	84.23066976984742	340	0.8970588235294118	76.0715967969854	43	0.7906976744186046	85.23704392284452	297	0.9124579124579124	0.6227758007117438	38	0	methylated (>=50%)	P15170	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A (Eukaryotic peptide chain release factor subunit 3a) (eRF3a) (EC 3.6.5.-) (G1 to S phase transition protein 1 homolog)	G1/S transition of mitotic cell cycle [GO:0000082]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; protein methylation [GO:0006479]; regulation of translational termination [GO:0006449]; translation [GO:0006412]; translational termination [GO:0006415]	hit with GO BP
GN012810	Chromosome_5A	1510	1	56	41.258278145695364	0.8736259194974791	0.5202913631633714	56	0	0.5202913631633714	56	0	NA	NA	NA	0.5050505050505051	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012811	Chromosome_5A	6765	2	217	36.49667405764967	0.9650765747524206	0.6558558558558558	216	0	0.6608168129130105	147	0	0.6459948320413437	69	0	0.6044678055190539	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012812	Chromosome_5A	302	1	20	51.324503311258276	1.0076743410076743	1.9823788546255507	20	0	1.9823788546255507	20	0	NA	NA	NA	2.85	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012813	Chromosome_5A	1185	1	36	43.79746835443038	0.6338969954530596	1.9305019305019304	14	0	1.9305019305019304	14	0	NA	NA	NA	0	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012824	Chromosome_5A	272	1	13	43.75	0.9994347088750707	0.42134831460674155	11	0	0.42134831460674155	11	0	NA	NA	NA	0.5893909626719057	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012844	Chromosome_5A	20183	9	299	36.31769310806124	0.4492791095890411	77.3798781863298	259	0.8918918918918919	45.561357702349866	15	0.4666666666666667	78.81645644229636	244	0.9180327868852459	64.03669724770643	45	0.6222222222222222	methylated (>=50%)	Q8N635	Meiosis-specific with OB domain-containing protein (EC 3.1.-.-)	double-strand break repair via homologous recombination [GO:0000724]; female meiosis I [GO:0007144]; fertilization [GO:0009566]; homologous chromosome pairing at meiosis [GO:0007129]; male meiosis I [GO:0007141]; male meiotic nuclear division [GO:0007140]; resolution of meiotic recombination intermediates [GO:0000712]	hit with GO BP
GN012845	Chromosome_5A	18013	13	288	36.856714595014715	0.47105989529750425	84.79071694985495	265	0.9245283018867925	77.74086378737542	22	0.8636363636363636	85.33180340409255	243	0.9300411522633745	56.15942028985507	24	0.5833333333333334	methylated (>=50%)	Q4QRK0	Methionine aminopeptidase 1 (MAP 1) (MetAP 1) (EC 3.4.11.18) (Peptidase M 1)	intracellular zinc ion homeostasis [GO:0006882]; protein processing [GO:0016485]	hit with GO BP
GN012846	Chromosome_5A	14094	9	256	34.887186036611325	0.5969498521384091	87.88231382978724	254	0.9488188976377953	86.6877971473851	23	0.9565217391304348	87.97211962349577	231	0.948051948051948	27.868852459016395	36	0.3611111111111111	methylated (>=50%)	O60931	Cystinosin	amino acid metabolic process [GO:0006520]; ATP metabolic process [GO:0046034]; brain development [GO:0007420]; cognition [GO:0050890]; glutathione metabolic process [GO:0006749]; L-cystine transport [GO:0015811]; oligopeptide transmembrane transport [GO:0035672]; positive regulation of TORC1 signaling [GO:1904263]; regulation of melanin biosynthetic process [GO:0048021]; regulation of TORC1 signaling [GO:1903432]; transmembrane transport [GO:0055085]	hit with GO BP
GN012847	Chromosome_5A	498	1	25	46.18473895582329	0.9420399515738499	0.43478260869565216	25	0	0.43478260869565216	25	0	NA	NA	NA	12.109375	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012848	Chromosome_5A	4514	3	50	36.154186973859105	0.34074353651632383	68.59977107974056	50	0.86	87.15328467153284	20	1	62.03512396694215	30	0.7666666666666667	61.98019801980198	11	0.6363636363636364	methylated (>=50%)	Q0VD59	E3 ubiquitin-protein ligase MARCHF8 (EC 2.3.2.27) (Membrane-associated RING finger protein 8) (Membrane-associated RING-CH protein VIII) (MARCH-VIII) (RING-type E3 ubiquitin transferase MARCHF8)	antigen processing and presentation of peptide antigen via MHC class II [GO:0002495]; immune response [GO:0006955]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN012849	Chromosome_5A	26153	27	400	34.527587657247736	0.5163498019660404	88.19681693192234	380	0.9315789473684211	79.06208718626156	54	0.8518518518518519	89.5155907313817	326	0.9447852760736196	0.16038492381716118	28	0	methylated (>=50%)	P28288	ATP-binding cassette sub-family D member 3 (EC 3.1.2.-) (EC 7.6.2.-) (70 kDa peroxisomal membrane protein) (PMP70)	bile acid and bile salt transport [GO:0015721]; bile acid biosynthetic process [GO:0006699]; fatty acid beta-oxidation [GO:0006635]; fatty acid biosynthetic process [GO:0006633]; long-chain fatty acid import into peroxisome [GO:0015910]; peroxisome organization [GO:0007031]; phytanic acid metabolic process [GO:1903512]; response to xenobiotic stimulus [GO:0009410]; very long-chain fatty acid catabolic process [GO:0042760]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN012850	Chromosome_5A	11287	11	309	35.70479312483388	0.8593973962918856	0.7380414225748421	297	0	0.5303867403314917	50	0	0.7928180016322723	247	0	0.6019830028328612	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012855	Chromosome_5A	2076	6	50	35.69364161849711	0.7566700685231084	0.6263865326895471	44	0	0.6395539521154476	36	0	0.5750798722044729	8	0	1.147396293027361	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012856	Chromosome_5A	9801	10	291	37.65942250790736	0.837409457257366	0.5115089514066496	291	0	0.4784688995215311	162	0	0.5448318804483188	129	0	1.1333333333333333	46	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN012857	Chromosome_5A	4425	5	139	36.76836158192091	0.9298523302432742	0.4246713852376138	139	0	0.5277044854881267	83	0	0.33695245226506926	56	0	0.3190810465858328	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012858	Chromosome_5A	1917	1	80	44.39227960354721	0.8520284009466982	0.49975012493753124	71	0	0.49975012493753124	71	0	NA	NA	NA	0.6817366343738788	50	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN012859	Chromosome_5A	13328	8	370	36.49459783913566	0.8339398727755335	0.767050191762548	361	0	0.5566185423551923	175	0	0.8658715896095409	186	0	0.4603748766853009	45	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN012860	Chromosome_5A	1032	1	38	41.666666666666664	0.8486658443160423	0.3586800573888092	38	0	0.3586800573888092	38	0	NA	NA	NA	0.5889646621202728	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012896	Chromosome_5A	1711	2	30	37.63880771478667	0.49536768963520555	0.5730659025787965	30	0	0.7672634271099744	13	0	0.4153686396677051	17	0	0.42390843577787196	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012894	Chromosome_5A	549	1	8	34.60837887067395	0.7457972491085074	0.819672131147541	8	0	0.819672131147541	8	0	NA	NA	NA	0.5629477993858751	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012893	Chromosome_5A	3244	5	63	37.66954377311961	0.6272985939097045	0.5145278450363197	63	0	0.8138351983723296	25	0	0.38776389487289964	38	0	1.083743842364532	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012892	Chromosome_5A	1588	2	26	35.45340050377834	0.529944808111924	0.2561912894961571	26	0	0.4357298474945534	14	0	0.1404494382022472	12	0	0.6008010680907877	28	0	unmethylated (<10%)	F1NPQ2	Multiple inositol polyphosphate phosphatase 1 (EC 3.1.3.62) (2,3-bisphosphoglycerate 3-phosphatase) (2,3-BPG phosphatase) (EC 3.1.3.80) (Band 17) (Histidine phosphatase of the endoplasmic reticulum 1) (HiPER1)	intracellular monoatomic cation homeostasis [GO:0030003]	hit with GO BP
GN012891	Chromosome_5A	9271	4	159	34.51623341602848	0.5820055077928359	77.36015918638073	155	0.864516129032258	51.02040816326531	38	0.5	83.52202973673441	117	0.9829059829059829	59.6656976744186	70	0.7142857142857143	methylated (>=50%)	F1NPQ2	Multiple inositol polyphosphate phosphatase 1 (EC 3.1.3.62) (2,3-bisphosphoglycerate 3-phosphatase) (2,3-BPG phosphatase) (EC 3.1.3.80) (Band 17) (Histidine phosphatase of the endoplasmic reticulum 1) (HiPER1)	intracellular monoatomic cation homeostasis [GO:0030003]	hit with GO BP
GN012890	Chromosome_5A	14638	12	181	37.4026506353327	0.35690819428683507	72.29805013927577	147	0.8367346938775511	86.40386162510056	61	0.9836065573770492	64.8274392841926	86	0.7325581395348837	47.135416666666664	18	0.3888888888888889	methylated (>=50%)	Q27128	Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase (PAPS synthase) (PAPS synthetase) (PAPSS) (Sulfurylase kinase) (SK) [Includes: Sulfate adenylyltransferase (EC 2.7.7.4) (ATP-sulfurylase) (Sulfate adenylate transferase) (SAT); Adenylyl-sulfate kinase (EC 2.7.1.25) (3'-phosphoadenosine-5'-phosphosulfate synthase) (APS kinase) (Adenosine-5'-phosphosulfate 3'-phosphotransferase) (Adenylylsulfate 3'-phosphotransferase)]	3'-phosphoadenosine 5'-phosphosulfate biosynthetic process [GO:0050428]; sulfate assimilation [GO:0000103]	hit with GO BP
GN012889	Chromosome_5A	540	1	25	47.77777777777778	0.8130081300813008	2.1739130434782608	7	0	2.1739130434782608	7	0	NA	NA	NA	0.6514657980456026	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012888	Chromosome_5A	288	1	18	54.166666666666664	0.8727272727272727	0.4694835680751174	18	0	0.4694835680751174	18	0	NA	NA	NA	0.40064102564102566	96	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012886	Chromosome_5A	16232	15	290	36.64982750123213	0.5323114285565663	83.8128225065385	287	0.9721254355400697	92.25210758731433	46	1	82.0092656142759	241	0.966804979253112	93.26923076923077	2	1	methylated (>=50%)	Q08DX0	Sorting nexin-29	NA	hit, no GO BP
GN012885	Chromosome_5A	58451	37	570	34.46134368958615	0.3308440984297306	88.36546434494196	564	0.9893617021276596	93.32209816726353	103	1	87.67026148618703	461	0.9869848156182213	71.13795295613477	24	0.75	methylated (>=50%)	Q6DFZ1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 (BFA-resistant GEF 1)	cell activation involved in immune response [GO:0002263]; cellular response to virus [GO:0098586]; COPI coating of Golgi vesicle [GO:0048205]; endoplasmic reticulum-Golgi intermediate compartment organization [GO:0097111]; establishment of monopolar cell polarity [GO:0061162]; Golgi disassembly [GO:0090166]; Golgi organization [GO:0007030]; Golgi to endosome transport [GO:0006895]; neutrophil chemotaxis [GO:0030593]; protein localization to endoplasmic reticulum exit site [GO:0070973]; protein localization to endoplasmic reticulum tubular network [GO:1903420]; protein localization to Golgi apparatus [GO:0034067]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of ARF protein signal transduction [GO:0032012]; regulation of mitotic cell cycle [GO:0007346]; regulation of protein localization to cell surface [GO:2000008]; retrograde transport, endosome to Golgi [GO:0042147]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN012884	Chromosome_5A	3824	2	99	34.23117154811715	0.8837634930713779	0.5949757602468048	98	0	0.5785123966942148	43	0	0.6009615384615384	55	0	0.612369871402327	39	0	unmethylated (<10%)	P43021	Nodal	anatomical structure formation involved in morphogenesis [GO:0048646]; anterior/posterior axis specification [GO:0009948]; anterior/posterior pattern specification [GO:0009952]; apoptotic signaling pathway [GO:0097190]; axial mesodermal cell fate specification [GO:0048327]; brain development [GO:0007420]; cell differentiation [GO:0030154]; cell fate commitment [GO:0045165]; cell migration [GO:0016477]; cell migration involved in gastrulation [GO:0042074]; determination of left/right asymmetry in lateral mesoderm [GO:0003140]; determination of left/right symmetry [GO:0007368]; digestive system development [GO:0055123]; digestive tract morphogenesis [GO:0048546]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic heart tube development [GO:0035050]; embryonic pattern specification [GO:0009880]; embryonic placenta development [GO:0001892]; embryonic process involved in female pregnancy [GO:0060136]; endoderm development [GO:0007492]; endodermal cell differentiation [GO:0035987]; epiblast cell-extraembryonic ectoderm cell signaling [GO:0060802]; floor plate morphogenesis [GO:0033505]; formation of anatomical boundary [GO:0048859]; gastrulation [GO:0007369]; gastrulation with mouth forming second [GO:0001702]; heart development [GO:0007507]; heart looping [GO:0001947]; in utero embryonic development [GO:0001701]; inhibition of neuroepithelial cell differentiation [GO:0002085]; left lung morphogenesis [GO:0060460]; liver development [GO:0001889]; lung development [GO:0030324]; maternal placenta development [GO:0001893]; maternal process involved in parturition [GO:0060137]; mesendoderm development [GO:0048382]; mesoderm formation [GO:0001707]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of cell development [GO:0010721]; negative regulation of cell differentiation [GO:0045596]; negative regulation of chorionic trophoblast cell proliferation [GO:1901383]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of trophoblast cell migration [GO:1901164]; nervous system development [GO:0007399]; neural fold formation [GO:0001842]; nodal signaling pathway [GO:0038092]; placenta development [GO:0001890]; polarity specification of proximal/distal axis [GO:0010085]; positive regulation of angiogenesis [GO:0045766]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cell-cell adhesion [GO:0022409]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of SMAD protein signal transduction [GO:0060391]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of vascular endothelial growth factor production [GO:0010575]; primitive streak formation [GO:0090009]; regulation of gastrulation [GO:0010470]; regulation of signal transduction [GO:0009966]; stem cell population maintenance [GO:0019827]; tissue morphogenesis [GO:0048729]; transforming growth factor beta receptor signaling pathway [GO:0007179]; trophectodermal cell differentiation [GO:0001829]; trophectodermal cellular morphogenesis [GO:0001831]; vasculature development [GO:0001944]	hit with GO BP
GN012883	Chromosome_5A	38249	10	449	36.54213182043975	0.3516615617746538	78.92665474060823	414	0.8864734299516909	91.24236252545825	19	1	78.47819638089588	395	0.8810126582278481	70.07659995058067	48	0.9166666666666666	methylated (>=50%)	O88544	COP9 signalosome complex subunit 4 (SGN4) (Signalosome subunit 4) (JAB1-containing signalosome subunit 4)	protein deneddylation [GO:0000338]	hit with GO BP
GN012882	Chromosome_5A	25266	11	450	35.59724530990263	0.5623195040300133	88.8121589542806	442	0.9932126696832579	95.65217391304348	35	1	88.37895426979183	407	0.9926289926289926	3.918669131238447	49	0.04081632653061224	methylated (>=50%)	Q08CM4	Protein lin-54 homolog	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN012881	Chromosome_5A	46738	26	500	34.46446146604476	0.360669033417331	83.97724928535644	499	0.9438877755511023	87.14781100996966	85	0.9764705882352941	83.47829052832634	414	0.9371980676328503	78.65489483251103	39	1	methylated (>=50%)	A7T1N0	Transient receptor potential cation channel subfamily M member-like 2 (nvTRPM2)	calcium ion transmembrane transport [GO:0070588]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN012880	Chromosome_5A	30358	18	504	35.88181039594176	0.5158193971070834	42.25322431088258	486	0.360082304526749	19.513503845465927	162	0.11728395061728394	49.26385442514475	324	0.48148148148148145	0.5031446540880503	79	0	sparse (10-50%)	Q8R0H9	ADP-ribosylation factor-binding protein GGA1 (Gamma-adaptin-related protein 1) (Golgi-localized, gamma ear-containing, ARF-binding protein 1)	Golgi to plasma membrane protein transport [GO:0043001]; Golgi to plasma membrane transport [GO:0006893]; intracellular protein localization [GO:0008104]; intracellular protein transport [GO:0006886]; positive regulation of protein catabolic process [GO:0045732]; protein localization to cell surface [GO:0034394]; protein localization to ciliary membrane [GO:1903441]; retrograde transport, endosome to Golgi [GO:0042147]	hit with GO BP
GN012879	Chromosome_5A	13642	19	124	34.738308165958074	0.30184496419489	79.2638197537333	124	0.9112903225806451	76.24309392265194	38	0.9210526315789473	80.46503112413035	86	0.9069767441860465	23.549684089603677	22	0.3181818181818182	methylated (>=50%)	O43299	AP-5 complex subunit zeta-1 (Adaptor-related protein complex 5 zeta subunit) (Zeta5)	double-strand break repair via homologous recombination [GO:0000724]; endosomal transport [GO:0016197]; lysosome organization [GO:0007040]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN012878	Chromosome_5A	8102	14	80	36.21328067143915	0.30186443764382176	72.41379310344827	75	0.8266666666666667	69.25418569254185	25	0.8	73.6	50	0.84	11.369378473976756	25	0.16	methylated (>=50%)	Q16960	Dynein intermediate chain 3, ciliary	cilium movement [GO:0003341]; outer dynein arm assembly [GO:0036158]	hit with GO BP
GN012877	Chromosome_5A	8145	3	161	36.70963781461019	0.5910577691478702	0.769941484447182	157	0	0.6666666666666666	40	0	0.789860396767083	117	0	2.9543754674644727	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012876	Chromosome_5A	2567	3	82	36.07323724191664	0.9819969862796415	1.6620498614958448	82	0	2.19435736677116	43	0	1.3375796178343948	39	0	1.6699801192842942	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012875	Chromosome_5A	24161	2	633	36.976946318447084	0.7670948157457264	0.895299676697339	621	0	0.667779632721202	32	0	0.9239168474837265	589	0	0.5502567865003668	46	0	unmethylated (<10%)	P80363	Crustacean calcium-binding protein 23 (CCBP-23)	NA	hit, no GO BP
GN012874	Chromosome_5A	1541	2	45	40.36340038935756	0.7193688600267644	0.5841741901221456	45	0	0.6674757281553398	42	0	0	3	0	0.7140023800079334	35	0	unmethylated (<10%)	A4QNP7	Doublesex- and mab-3-related transcription factor A2 (Doublesex- and mab-3-related transcription factor 5)	regulation of transcription by RNA polymerase II [GO:0006357]; sex differentiation [GO:0007548]; system development [GO:0048731]	hit with GO BP
GN012873	Chromosome_5A	600	1	21	43.833333333333336	0.7289135716765012	1.0126582278481013	21	0	1.0126582278481013	21	0	NA	NA	NA	0.7393121182899389	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012872	Chromosome_5A	2086	5	44	38.302972195589646	0.5763226965050421	0.28312570781426954	43	0	0.29086678301337987	40	0	0	3	0	0.5336179295624333	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012871	Chromosome_5A	2585	4	76	38.6073500967118	0.792893581299238	0.4243710215216732	76	0	0.40816326530612246	53	0	0.4480955937266617	23	0	1.0994764397905759	46	0	unmethylated (<10%)	Q8NBH2	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN012870	Chromosome_5A	378	1	19	42.592592592592595	1.108675517134918	0.7803790412486065	19	0	0.7803790412486065	19	0	NA	NA	NA	0.4724940938238272	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012869	Chromosome_5A	8222	7	217	37.971296521527606	0.7327082922662461	0.48070997165043755	195	0	0.2828854314002829	48	0	0.522466039707419	147	0	1.2082853855005753	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012868	Chromosome_5A	1457	2	43	37.13109128345916	0.856473000683527	0.42780748663101603	43	0	0.7312614259597806	13	0	0.30234315948601664	30	0	0.580875781948168	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012867	Chromosome_5A	522	1	10	40.99616858237548	0.48226164079822614	0.36101083032490977	10	0	0.36101083032490977	10	0	NA	NA	NA	0.5786249149081008	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012866	Chromosome_5A	3508	6	49	31.841505131128848	0.5511478773887393	0.7553956834532374	49	0	0.7361963190184049	16	0	0.7633587786259542	33	0	1.2951969778737182	72	0	unmethylated (<10%)	Q3T0D7	Small COPII coat GTPase SAR1A (EC 3.6.5.2)	cellular response to leucine starvation [GO:1990253]; COPII vesicle coating [GO:0048208]; COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; membrane organization [GO:0061024]; negative regulation of TORC1 signaling [GO:1904262]; regulation of COPII vesicle coating [GO:0003400]; vesicle organization [GO:0016050]	hit with GO BP
GN012865	Chromosome_5A	366	1	17	42.349726775956285	1.0359640359640359	0.554016620498615	17	0	0.554016620498615	17	0	NA	NA	NA	1.4533965244865719	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012864	Chromosome_5A	8035	7	211	37.685127566894835	0.7402587479150838	0.6751054852320675	189	0	0.7656967840735069	47	0	0.6547208821502413	142	0	1.772679874869656	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012863	Chromosome_5A	672	2	25	38.541666666666664	1.0358860525342213	0.6622516556291391	25	0	0.34762456546929316	12	0	0.9483667017913593	13	0	3.5211267605633805	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020222	Chromosome_5A	261	1	4	51.34099616858238	0.23684210526315788	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8409250175192712	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012862	Chromosome_5A	558	1	13	53.40501792114696	0.3310514786418401	0.8130081300813008	8	0	0.8130081300813008	8	0	NA	NA	NA	0.9794776119402985	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012861	Chromosome_5A	405	1	25	51.851851851851855	0.9267734553775744	0.8426966292134831	18	0	0.8426966292134831	18	0	NA	NA	NA	0.3107520198881293	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012905	Chromosome_5A	315	2	4	34.6031746031746	0.4251012145748988	0	4	0	0	4	0	NA	NA	NA	0.5012531328320802	52	0	NA	Q559R0	Small COPII coat GTPase SAR1A (EC 3.6.5.2)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; membrane organization [GO:0061024]; regulation of COPII vesicle coating [GO:0003400]; vesicle organization [GO:0016050]	hit with GO BP
GN012906	Chromosome_5A	378	1	17	42.06349206349206	1.017094017094017	0.36968576709796674	17	0	0.36968576709796674	17	0	NA	NA	NA	0.4094165813715456	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012909	Chromosome_5A	1127	3	38	38.065661047027504	0.9344941956882256	0.4583445672688056	38	0	0.34876347495244137	34	0	1.0810810810810811	4	0	0.6539000467071462	41	0	unmethylated (<10%)	P91550	Receptor-type guanylate cyclase gcy-15 (EC 4.6.1.2)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN012910	Chromosome_5A	3881	2	118	36.02164390620974	0.9380521547477371	1.0389285267242458	117	0	0.7158726240434461	47	0	1.3712544438801422	70	0	1.3916500994035785	55	0	unmethylated (<10%)	Q3UVX5	Metabotropic glutamate receptor 5 (mGluR5)	associative learning [GO:0008306]; cellular response to amyloid-beta [GO:1904646]; chemical synaptic transmission [GO:0007268]; cognition [GO:0050890]; conditioned place preference [GO:1990708]; desensitization of G protein-coupled receptor signaling pathway [GO:0002029]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; learning [GO:0007612]; learning or memory [GO:0007611]; locomotory behavior [GO:0007626]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of dendritic spine morphogenesis [GO:0061002]; negative regulation of excitatory postsynaptic potential [GO:0090394]; operant conditioning [GO:0035106]; phospholipase C-activating G protein-coupled glutamate receptor signaling pathway [GO:0007206]; positive regulation of calcium-mediated signaling [GO:0050850]; positive regulation of cellular response to hypoxia [GO:1900039]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of dopamine secretion [GO:0033603]; positive regulation of long-term neuronal synaptic plasticity [GO:0048170]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of neural precursor cell proliferation [GO:2000179]; positive regulation of sensory perception of pain [GO:1904058]; protein localization to nuclear inner membrane [GO:0036228]; protein phosphorylation [GO:0006468]; regulation of DNA-templated transcription [GO:0006355]; regulation of long-term neuronal synaptic plasticity [GO:0048169]; regulation of long-term synaptic depression [GO:1900452]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of hot stimulus [GO:0062036]; synapse organization [GO:0050808]; temperature homeostasis [GO:0001659]	hit with GO BP
GN012911	Chromosome_5A	5413	3	165	36.70792536486237	0.9068566728941597	1.9850083287062743	163	0	1.293103448275862	21	0	2.0873167622689612	142	0	0.5575598556903902	45	0	unmethylated (<10%)	Q13255	Metabotropic glutamate receptor 1 (mGluR1)	chemical synaptic transmission [GO:0007268]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; G protein-coupled receptor signaling pathway [GO:0007186]; locomotory behavior [GO:0007626]; phospholipase C-activating G protein-coupled glutamate receptor signaling pathway [GO:0007206]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; positive regulation of MAPK cascade [GO:0043410]; regulation of sensory perception of pain [GO:0051930]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of pain [GO:0019233]; synaptic signaling via neuropeptide [GO:0099538]	hit with GO BP
GN012904	Chromosome_5A	1290	1	55	42.17054263565891	0.979120378676014	0.5144789063648391	55	0	0.5144789063648391	55	0	NA	NA	NA	1.647875108412836	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012902	Chromosome_5A	1152	1	19	32.291666666666664	0.7807383627608346	0	19	0	0	19	0	NA	NA	NA	0.4291845493562232	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012901	Chromosome_5A	4613	11	104	33.53566009104704	0.8025346439253525	0.6900410294666169	104	0	0.5922165820642978	57	0	0.7671781187458305	47	0	0.7321772639691715	39	0	unmethylated (<10%)	P08684	Cytochrome P450 3A4 (EC 1.14.14.1) (1,4-cineole 2-exo-monooxygenase) (1,8-cineole 2-exo-monooxygenase) (EC 1.14.14.56) (Albendazole monooxygenase (sulfoxide-forming)) (EC 1.14.14.73) (Albendazole sulfoxidase) (CYPIIIA3) (CYPIIIA4) (Cholesterol 25-hydroxylase) (Cytochrome P450 3A3) (Cytochrome P450 HLp) (Cytochrome P450 NF-25) (Cytochrome P450-PCN1) (Nifedipine oxidase) (Quinine 3-monooxygenase) (EC 1.14.14.55)	aflatoxin metabolic process [GO:0046222]; alkaloid catabolic process [GO:0009822]; cholesterol metabolic process [GO:0008203]; estrogen metabolic process [GO:0008210]; lipid hydroxylation [GO:0002933]; lipid metabolic process [GO:0006629]; long-chain fatty acid biosynthetic process [GO:0042759]; monoterpenoid metabolic process [GO:0016098]; oxidative demethylation [GO:0070989]; retinoic acid metabolic process [GO:0042573]; retinol metabolic process [GO:0042572]; steroid catabolic process [GO:0006706]; steroid metabolic process [GO:0008202]; vitamin D catabolic process [GO:0042369]; vitamin D metabolic process [GO:0042359]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN002144	Chromosome_5A	409	1	3	41.075794621026894	0.17451287156876688	NA	0	NA	NA	NA	NA	NA	NA	NA	5.660377358490566	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012900	Chromosome_5A	3308	5	123	36.27569528415961	1.1327001024453254	1.0558069381598794	123	0	1.2048192771084338	49	0	0.9838998211091234	74	0	0.2386634844868735	52	0	unmethylated (<10%)	Q8VDS3	Chromobox protein homolog 7	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; sebaceous gland development [GO:0048733]	hit with GO BP
GN012913	Chromosome_5A	4822	2	73	36.72749896308586	0.44956755403658805	35.63181526619628	73	0.1643835616438356	22.904109589041095	54	0.037037037037037035	53.596287703016245	19	0.5263157894736842	60.39408866995074	15	0.8666666666666667	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012914	Chromosome_5A	21018	13	325	34.25635169854411	0.5312167253187604	83.46548056468768	315	0.9142857142857143	83.10249307479225	26	0.8461538461538461	83.4927234927235	289	0.9204152249134948	7.314974182444062	66	0	methylated (>=50%)	Q99447	Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14) (CTP:phosphoethanolamine cytidylyltransferase) (Phosphorylethanolamine transferase)	phosphatidylethanolamine biosynthetic process [GO:0006646]; phospholipid biosynthetic process [GO:0008654]	hit with GO BP
GN012915	Chromosome_5A	32481	34	988	36.51365413626428	0.91265492819495	0.8249440715883669	980	0	0.5510469892796312	509	0	1.0631808278867103	471	0	0.7258064516129032	45	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN012916	Chromosome_5A	11536	5	309	37.17926490984743	0.77583070524247	1.5489913544668588	308	0	0.7510729613733905	22	0	1.5962859323327399	286	0	1.06171201061712	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012918	Chromosome_5A	1257	1	53	42.6412092283214	0.9291243044224091	0.6239364719228587	53	0	0.6239364719228587	53	0	NA	NA	NA	0.414651002073255	60	0	unmethylated (<10%)	P28646	Somatostatin receptor type 1 (SS-1-R) (SS1-R) (SS1R) (SRIF-2)	cellular response to estradiol stimulus [GO:0071392]; cellular response to leukemia inhibitory factor [GO:1990830]; cerebellum development [GO:0021549]; forebrain development [GO:0030900]; G protein-coupled receptor signaling pathway [GO:0007186]; glutamate receptor signaling pathway [GO:0007215]; negative regulation of growth hormone secretion [GO:0060125]; neuropeptide signaling pathway [GO:0007218]; response to starvation [GO:0042594]; spermatogenesis [GO:0007283]; T cell differentiation [GO:0030217]	hit with GO BP
GN012929	Chromosome_5A	450	1	21	41.55555555555556	1.0834670947030498	0.9817671809256662	21	0	0.9817671809256662	21	0	NA	NA	NA	0.9544334975369458	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012928	Chromosome_5A	16575	9	261	35.52337858220211	0.501050380749992	85.8447741364039	261	0.9770114942528736	84.95137046861184	81	0.9506172839506173	86.2519139334354	180	0.9888888888888889	78.40752004423555	51	0.8627450980392157	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012927	Chromosome_5A	16150	9	190	34.4953560371517	0.3973145498569227	76.76120016440608	187	0.8288770053475936	53.056516724336795	20	0.5	78.58027969552133	167	0.8682634730538922	1.8447018447018446	77	0	methylated (>=50%)	Q6BWA5	Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase)	phosphate-containing compound metabolic process [GO:0006796]	hit with GO BP
GN012926	Chromosome_5A	56797	10	659	34.07222212440798	0.4011900145237444	57.12033113235439	655	0.566412213740458	69.78045630650021	47	0.723404255319149	56.35175748072651	608	0.5542763157894737	1.2341669373173108	49	0	methylated (>=50%)	P91943	Protein pangolin, isoforms A/H/I/S (dTCF)	embryonic pattern specification [GO:0009880]; heart development [GO:0007507]; imaginal disc-derived wing morphogenesis [GO:0007476]; mesodermal cell fate determination [GO:0007500]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of stem cell proliferation [GO:0072091]; salivary gland morphogenesis [GO:0007435]; spiracle morphogenesis, open tracheal system [GO:0035277]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN003575	Chromosome_5A	1107	1	24	42.637759710930446	0.4994360478231446	0.4807692307692308	24	0	0.4807692307692308	24	0	NA	NA	NA	0.42265426880811496	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012925	Chromosome_5A	5464	5	142	36.987554904831626	0.7634588892824812	0.6179024716098864	142	0	0.5614823133071308	85	0	0.7007419620774938	57	0	10.422698320787493	28	0	unmethylated (<10%)	A6H603	NACHT domain- and WD repeat-containing protein 1	intracellular signal transduction [GO:0035556]; positive regulation of gene expression [GO:0010628]	hit with GO BP
GN012924	Chromosome_5A	2023	3	60	38.70489372219476	0.7958509271158436	0.7367990176013098	60	0	0.7530120481927711	52	0	0.6651884700665188	8	0	0.4608294930875576	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012923	Chromosome_5A	1909	3	43	40.597171293871135	0.5475532965127138	62.089752176825186	40	0.525	56.13382899628253	6	0.5	63.39869281045752	34	0.5294117647058824	0.4178272980501393	42	0	methylated (>=50%)	O89035	Mitochondrial dicarboxylate carrier (DIC) (Solute carrier family 25 member 10)	glyceraldehyde-3-phosphate biosynthetic process [GO:0046166]; malate transmembrane transport [GO:0071423]; malate transport [GO:0015743]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; phosphate ion transport [GO:0006817]; succinate transmembrane transport [GO:0071422]; sulfate transmembrane transport [GO:1902358]; thiosulfate transport [GO:0015709]	hit with GO BP
GN012922	Chromosome_5A	1316	3	29	46.96048632218845	0.4021284442337074	1.4285714285714286	23	0	1.1406844106463878	19	0	2.2988505747126435	4	0	0.7869589657110736	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012921	Chromosome_5A	405	1	11	46.91358024691358	0.4956057403493158	1.25	11	0	1.25	11	0	NA	NA	NA	0.411522633744856	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012919	Chromosome_5A	753	1	7	42.62948207171315	0.24550535631113182	1.465201465201465	7	0	1.465201465201465	7	0	NA	NA	NA	0.5617977528089888	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012932	Chromosome_5A	2060	2	75	40.53398058252427	0.8866571018651362	0.34965034965034963	75	0	0.4108463434675431	52	0	0.25477707006369427	23	0	0.7117437722419929	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012930	Chromosome_5A	984	1	10	40.24390243902439	0.2517718701225597	32.16432865731463	10	0	32.16432865731463	10	0	NA	NA	NA	48.63713798977854	47	0.3829787234042553	sparse (10-50%)	O60290	Zinc finger protein 862	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN012933	Chromosome_5A	957	1	26	39.81191222570533	0.6896341463414634	0.9285051067780873	26	0	0.9285051067780873	26	0	NA	NA	NA	0.6152849740932642	62	0	unmethylated (<10%)	Q8SWR3	Sex peptide receptor	G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of female receptivity, post-mating [GO:0045434]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN012934	Chromosome_5A	1014	1	29	47.633136094674555	0.5060228524229075	0.22172949002217296	29	0	0.22172949002217296	29	0	NA	NA	NA	0.5453306066803	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012939	Chromosome_5A	32462	16	424	34.37249707350132	0.4434666304432718	71.30271114492811	397	0.7581863979848866	72.02859696157283	28	0.8214285714285714	71.26865671641791	369	0.7533875338753387	85.3211009174312	14	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012938	Chromosome_5A	9008	9	87	32.981793960923625	0.35579235821123195	62.807377049180324	86	0.6395348837209303	57.247037374658156	20	0.55	64.41977266719535	66	0.6666666666666666	72.33333333333333	23	0.7391304347826086	methylated (>=50%)	Q6DJP7	Cleavage and polyadenylation specificity factor subunit 4	NA	hit, no GO BP
GN012937	Chromosome_5A	19615	16	556	35.936783074177924	0.8780624872186699	4.841149773071105	554	0	0.43529877324891175	52	0	5.2224238895928226	502	0	0.5552128315854411	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012936	Chromosome_5A	801	1	17	44.44444444444444	0.43989662413180425	2.056555269922879	17	0	2.056555269922879	17	0	NA	NA	NA	0.8072653884964682	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012935	Chromosome_5A	798	1	22	41.478696741854634	0.6419482229047828	0.6060606060606061	22	0	0.6060606060606061	22	0	NA	NA	NA	0.44466403162055335	44	0	unmethylated (<10%)	Q8IN35	Neuropeptide SIFamide receptor	cellular response to hormone stimulus [GO:0032870]; G protein-coupled receptor signaling pathway [GO:0007186]; male mating behavior [GO:0060179]; mating behavior, sex discrimination [GO:0048047]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN012950	Chromosome_5A	231	1	16	55.41125541125541	0.9078850405305822	0.7712082262210797	16	0	0.7712082262210797	16	0	NA	NA	NA	0.6815968841285297	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012949	Chromosome_5A	2811	4	75	35.574528637495554	0.8433033732134928	0.543970988213962	75	0	0.5524861878453039	19	0	0.5398110661268556	56	0	0.24284943335132217	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012948	Chromosome_5A	501	1	6	37.5249500998004	0.3563300142247511	0.390625	6	0	0.390625	6	0	NA	NA	NA	0.5977011494252874	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012947	Chromosome_5A	25669	23	391	35.07733063228018	0.4957885596622114	87.73584905660377	388	0.9536082474226805	80.37806176783812	74	0.9054054054054054	88.7889642557732	314	0.964968152866242	0.6300630063006301	54	0	methylated (>=50%)	O95487	Protein transport protein Sec24B (SEC24-related protein B)	COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; positive regulation of ER to Golgi vesicle-mediated transport [GO:1902953]; positive regulation of protein exit from endoplasmic reticulum [GO:0070863]	hit with GO BP
GN012946	Chromosome_5A	22637	37	544	37.12064319476963	0.6976789035681851	1.2785595400211833	542	0	1.1176470588235294	164	0	1.3342839682216336	378	0	0.6433453960595095	48	0	unmethylated (<10%)	P24733	Myosin heavy chain, striated muscle	locomotion [GO:0040011]; muscle contraction [GO:0006936]; myofibril assembly [GO:0030239]; myosin filament organization [GO:0031033]	hit with GO BP
GN012945	Chromosome_5A	7733	15	50	34.69546101125049	0.2152885194675611	76.22950819672131	50	0.9	75.2007136485281	18	0.9444444444444444	76.79180887372014	32	0.875	68.78923766816143	32	0.75	methylated (>=50%)	O88496	Vitamin K-dependent gamma-carboxylase (VKGC) (EC 4.1.1.90) (Gamma-glutamyl carboxylase) (Peptidyl-glutamate 4-carboxylase) (Vitamin K gamma glutamyl carboxylase)	lung growth [GO:0060437]; negative regulation of bone development [GO:1903011]; negative regulation of neurotransmitter secretion [GO:0046929]; negative regulation of testosterone biosynthetic process [GO:2000225]; peptidyl-glutamic acid carboxylation [GO:0017187]; protein maturation [GO:0051604]; response to dexamethasone [GO:0071548]; response to manganese ion [GO:0010042]; response to oxygen levels [GO:0070482]; response to parathyroid hormone [GO:0071107]; response to Thyroglobulin triiodothyronine [GO:1904016]; response to vitamin D [GO:0033280]; response to vitamin K [GO:0032571]; vitamin K metabolic process [GO:0042373]	hit with GO BP
GN012944	Chromosome_5A	5939	6	53	37.24532749621148	0.2581343817246628	68.21079473013175	53	0.8113207547169812	68.22916666666667	16	0.875	68.2018927444795	37	0.7837837837837838	37.60361718161266	24	0.4166666666666667	methylated (>=50%)	Q5HZH2	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.157) (20S S rRNA accumulation protein 3 homolog)	enzyme-directed rRNA pseudouridine synthesis [GO:0000455]; maturation of SSU-rRNA [GO:0030490]	hit with GO BP
GN012943	Chromosome_5A	11168	7	126	35.189828080229226	0.3652362552465621	74.81779614924399	126	0.9365079365079365	87.30650154798762	9	1	73.87387387387388	117	0.9316239316239316	78.19940476190476	21	0.9047619047619048	methylated (>=50%)	Q58CS8	N-acetylglucosamine-1-phosphotransferase subunit gamma (GlcNAc-1-phosphotransferase subunit gamma) (UDP-N-acetylglucosamine-1-phosphotransferase subunit gamma)	carbohydrate phosphorylation [GO:0046835]	hit with GO BP
GN012942	Chromosome_5A	5940	3	91	36.34680134680135	0.46450914340712224	87.38308457711443	91	0.9010989010989011	71.11111111111111	7	0.7142857142857143	88.80952380952381	84	0.9166666666666666	40.75194468452895	31	0.5161290322580645	methylated (>=50%)	Q9CPQ3	Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog)	positive regulation of apoptotic process [GO:0043065]; protein import into mitochondrial matrix [GO:0030150]; protein insertion into mitochondrial membrane [GO:0051204]	hit with GO BP
GN012941	Chromosome_5A	1056	1	21	38.446969696969695	0.5546218487394958	87.94701986754967	15	1	87.94701986754967	15	1	NA	NA	NA	81.87732342007435	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012957	Chromosome_5A	24297	10	642	35.54759846894678	0.8367825294137969	1.7244168365201074	626	0	1.7269225990806312	209	0	1.7235345581802275	417	0	3.446172613601708	63	0	unmethylated (<10%)	Q5H8C1	FRAS1-related extracellular matrix protein 1 (Protein QBRICK)	cell communication [GO:0007154]; cell-matrix adhesion [GO:0007160]; craniofacial suture morphogenesis [GO:0097094]; epithelial structure maintenance [GO:0010669]	hit with GO BP
GN012956	Chromosome_5A	359	2	18	43.45403899721448	1.087878787878788	1.214574898785425	18	0	1.4492753623188406	15	0	0	3	0	1.0818120351588911	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012955	Chromosome_5A	4296	6	102	35.89385474860335	0.7373593236767002	1.039677487799703	102	0	1.3131976362442548	38	0	0.9090909090909091	64	0	0.49782202862476665	50	0	unmethylated (<10%)	H2A0L5	Putative chitinase 2 (EC 3.2.1.14) (Chitinase-like protein 3) (Clp3)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	hit with GO BP
GN012954	Chromosome_5A	3521	7	95	38.19937517750639	0.7419208162359987	0.8014247551202137	95	0	0.9414654113794515	59	0	0.634455832113226	36	0	0.5833333333333334	33	0	unmethylated (<10%)	H2A0L4	Putative chitinase 1 (EC 3.2.1.14) (Chitinase-like protein 1) (Clp1)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	hit with GO BP
GN012953	Chromosome_5A	6162	7	189	37.56897111327491	0.8693021506050536	0.8572653236176596	186	0	0.6125574272588055	50	0	0.92228400922284	136	0	0.43478260869565216	40	0	unmethylated (<10%)	H2A0L4	Putative chitinase 1 (EC 3.2.1.14) (Chitinase-like protein 1) (Clp1)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	hit with GO BP
GN012963	Chromosome_5A	857	3	34	42.35705950991832	0.9138179765414288	0.6435006435006435	34	0	0.7062146892655368	32	0	0	2	0	0.7159005275056518	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012962	Chromosome_5A	2551	6	57	38.92591140729126	0.597051022000312	0.34516765285996054	57	0	0.4294917680744452	41	0	0.15847860538827258	16	0	0.5640157924421884	41	0	unmethylated (<10%)	Q95M17	Acidic mammalian chitinase (AMCase) (EC 3.2.1.14) (Chitin-binding protein b04) (CBPb04)	carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]; positive regulation of chemokine production [GO:0032722]; production of molecular mediator involved in inflammatory response [GO:0002532]	hit with GO BP
GN012951	Chromosome_5A	1046	2	16	42.92543021032505	0.3497596656217346	1.183431952662722	16	0	1.2779552715654952	15	0	0	1	0	20.767649074708704	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012964	Chromosome_5A	759	1	26	41.89723320158103	0.787595785440613	0.40096230954290296	26	0	0.40096230954290296	26	0	NA	NA	NA	0.43600124571784493	64	0	unmethylated (<10%)	Q9W741	Noggin-1	dorsal/ventral pattern formation [GO:0009953]; negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of endodermal cell fate specification [GO:0042664]; osteoblast differentiation [GO:0001649]	hit with GO BP
GN012965	Chromosome_5A	3571	3	112	35.81629795575469	0.978791927913112	0.846140562942497	112	0	0.4590665646518745	30	0	0.9589652096342551	82	0	0.9664582148948266	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012966	Chromosome_5A	1001	1	33	48.75124875124875	0.5589813012945257	0.33783783783783783	15	0	0.33783783783783783	15	0	NA	NA	NA	0.5487804878048781	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012967	Chromosome_5A	558	1	16	42.473118279569896	0.6429497335445773	0.5190311418685121	16	0	0.5190311418685121	16	0	NA	NA	NA	2.291442892946652	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012968	Chromosome_5A	1058	3	32	36.20037807183365	0.9246231155778895	0.8839779005524862	32	0	0.8264462809917356	19	0	0.9345794392523364	13	0	1.4595660749506902	71	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN012970	Chromosome_5A	7076	3	210	34.29903900508762	1.0091135045567523	0.6755785539744142	209	0	0.7177033492822966	50	0	0.6663159740487463	159	0	0.6386066763425254	58	0	unmethylated (<10%)	O08934	Homeobox protein unc-4 homolog (Homeobox protein Uncx4.1)	cartilage condensation [GO:0001502]; common myeloid progenitor cell proliferation [GO:0035726]; dorsal spinal cord development [GO:0021516]; olfactory bulb interneuron differentiation [GO:0021889]; pattern specification process [GO:0007389]; regulation of cell differentiation [GO:0045595]; regulation of gene expression [GO:0010468]	hit with GO BP
GN012971	Chromosome_5A	17771	9	207	35.46226999043385	0.3712838279751177	88.9119501875948	203	1	91.83955739972338	13	1	88.73263300576076	190	1	21.06589845156644	44	0.29545454545454547	methylated (>=50%)	A1Z3X3	Golgi to ER traffic protein 4 homolog (Conserved edge expressed protein)	protein insertion into ER membrane [GO:0045048]; tail-anchored membrane protein insertion into ER membrane [GO:0071816]	hit with GO BP
GN012972	Chromosome_5A	8462	8	91	36.09075868588986	0.33142209337157535	73.8215017700764	91	0.945054945054945	78.83663366336634	17	0.9411764705882353	72.93266067119983	74	0.9459459459459459	87.46518105849582	18	1	methylated (>=50%)	Q9CYU6	Diphthine methyltransferase (EC 3.1.1.97) (Diphthamide biosynthesis protein 7) (DPH7) (WD repeat-containing protein 85)	protein histidyl modification to diphthamide [GO:0017183]	hit with GO BP
GN012973	Chromosome_5A	29820	11	470	34.14822266934943	0.5417769839759196	85.98502216108818	470	0.9702127659574468	90.79189686924494	33	1	85.64319156598893	437	0.9679633867276888	65.13994910941476	22	0.7727272727272727	methylated (>=50%)	Q08CX2	SH2 domain-containing protein 4A	NA	hit, no GO BP
GN012974	Chromosome_5A	17026	12	102	32.01574063197463	0.2364548358372342	51.616784478869	100	0.58	59.50118764845606	28	0.8571428571428571	48.94259818731118	72	0.4722222222222222	58.142664872139974	10	0.7	methylated (>=50%)	Q5R754	Cyclin-dependent kinase-like 2 (EC 2.7.11.22)	NA	hit, no GO BP
GN012975	Chromosome_5A	16229	11	171	35.30716618399162	0.33837208579258843	87.47603189020083	164	0.975609756097561	84.95575221238938	32	0.96875	87.87559920495733	132	0.9772727272727273	65.98540145985402	11	1	methylated (>=50%)	F1LZF0	Kelch-like protein 2 (Mayven)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein catabolic process [GO:0030163]; protein ubiquitination [GO:0016567]	hit with GO BP
GN012976	Chromosome_5A	663	4	18	38.159879336349924	0.7519848771266541	0.8974358974358975	18	0	1.0714285714285714	13	0	0.45454545454545453	5	0	0.6031995803829006	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012977	Chromosome_5A	369	2	11	36.856368563685635	0.9166666666666666	0.46439628482972134	11	0	0.5154639175257731	10	0	0	1	0	0.6246096189881324	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012978	Chromosome_5A	365	1	18	46.3013698630137	0.9256128486897718	0.9685230024213075	18	0	0.9685230024213075	18	0	NA	NA	NA	0.5088377075522228	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012979	Chromosome_5A	3961	3	134	39.7879323403181	0.8717733935129525	0.6535947712418301	134	0	0.6718039913060659	131	0	0	3	0	0.6175221922037823	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012980	Chromosome_5A	1974	4	47	46.149949341438706	0.44816392777439645	0.9063444108761329	44	0	0.9493670886075949	27	0	0.8670520231213873	17	0	2.929532858273951	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012981	Chromosome_5A	3255	1	107	42.48847926267281	0.7296952453582847	0.4288164665523156	101	0	0.4288164665523156	101	0	NA	NA	NA	0.380517503805175	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012982	Chromosome_5A	10431	4	76	33.05531588534177	0.26697811351712336	78.63231672665277	76	0.9342105263157895	83.38692390139336	17	1	77.61159687068569	59	0.9152542372881356	81.26709206927985	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN012983	Chromosome_5A	2220	1	51	40.945945945945944	0.5520557029177718	65.00586166471278	51	0.9019607843137255	65.00586166471278	51	0.9019607843137255	NA	NA	NA	64.52866861030127	13	0.8461538461538461	methylated (>=50%)	P42674	Blastula protease 10 (EC 3.4.24.-)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN012984	Chromosome_5A	1072	2	47	40.39179104477612	1.0752027315407597	0.5744375299186214	47	0	0.5609382967873534	45	0	0.78125	2	0	0.5738880918220947	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012985	Chromosome_5A	1249	1	35	41.313050440352285	0.6579323630781271	0.6039689387402933	35	0	0.6039689387402933	35	0	NA	NA	NA	0.4408273991183452	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012986	Chromosome_5A	19078	23	259	36.49753642939511	0.4077140873526996	88.09660066384342	238	0.9789915966386554	94.8596427269413	52	1	86.83728192247641	186	0.9731182795698925	31.98443579766537	31	0.2903225806451613	methylated (>=50%)	P53992	Protein transport protein Sec24C (SEC24-related protein C)	COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; positive regulation of ER to Golgi vesicle-mediated transport [GO:1902953]; positive regulation of protein exit from endoplasmic reticulum [GO:0070863]	hit with GO BP
GN012987	Chromosome_5A	35305	7	556	34.30392295708823	0.53645164434009	52.30473751600512	522	0.5057471264367817	39.57446808510638	21	0.5238095238095238	52.90646999664767	501	0.5049900199600799	0.6180788050476436	66	0	methylated (>=50%)	Q5R3Z6	Ragulator complex protein LAMTOR3 (Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3)	cellular response to amino acid stimulus [GO:0071230]; intracellular protein localization [GO:0008104]; positive regulation of TOR signaling [GO:0032008]; positive regulation of TORC1 signaling [GO:1904263]	hit with GO BP
GN012988	Chromosome_5A	8905	3	261	35.699045480067376	0.920145610888749	1.3079425318514502	261	0	2.2412656558998023	54	0	1.066370926463061	207	0	0.45592705167173253	58	0	unmethylated (<10%)	A4IIK7	Protein NDNF	cellular response to fibroblast growth factor stimulus [GO:0044344]; extracellular matrix organization [GO:0030198]; gonadotrophin-releasing hormone neuronal migration to the hypothalamus [GO:0021828]; negative regulation of neuron apoptotic process [GO:0043524]; neuron migration [GO:0001764]; positive regulation of cell-substrate adhesion [GO:0010811]; positive regulation of neuron projection development [GO:0010976]	hit with GO BP
GN012992	Chromosome_5A	16759	7	261	36.44608866877498	0.4721397441565664	85.56959144190282	260	0.9192307692307692	78.06637806637806	17	0.7647058823529411	85.87761388543333	243	0.9300411522633745	0.8130081300813008	41	0	methylated (>=50%)	Q4R7Y4	Small ribosomal subunit protein RACK1 (Guanine nucleotide-binding protein subunit beta-2-like 1) [Cleaved into: Small ribosomal subunit protein RACK1, N-terminally processed (Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed)]	cellular response to growth factor stimulus [GO:0071363]; negative regulation of cell growth [GO:0030308]; negative regulation of phagocytosis [GO:0050765]; negative regulation of Wnt signaling pathway [GO:0030178]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell migration [GO:0030335]; positive regulation of gastrulation [GO:2000543]; positive regulation of Golgi to plasma membrane protein transport [GO:0042998]; positive regulation of GTPase activity [GO:0043547]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein phosphorylation [GO:0001934]; positive regulation of protein-containing complex assembly [GO:0031334]; regulation of cell cycle [GO:0051726]; regulation of cell division [GO:0051302]; regulation of establishment of cell polarity [GO:2000114]; regulation of protein localization [GO:0032880]	hit with GO BP
GN012997	Chromosome_5A	507	1	13	45.956607495069036	0.48606194690265486	0.23980815347721823	13	0	0.23980815347721823	13	0	NA	NA	NA	0.46875	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013001	Chromosome_5A	18180	5	522	36.07260726072607	0.8826519104750947	0.5181569030489894	517	0	0.6676557863501483	38	0	0.5089983639338302	479	0	0.6187161639597835	51	0	unmethylated (<10%)	Q96P65	Pyroglutamylated RF-amide peptide receptor (AQ27) (G protein-coupled receptor 103) (Orexigenic neuropeptide QRFP receptor) (SP9155)	cellular response to hormone stimulus [GO:0032870]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN013003	Chromosome_5A	300	1	13	43	0.940212150433944	0.6116207951070336	13	0	0.6116207951070336	13	0	NA	NA	NA	0.6031882809133994	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001537	Chromosome_5A	416	2	5	44.47115384615385	0.25838509316770186	0.8658008658008658	5	0	1.0810810810810811	4	0	0	1	0	2.5304592314901595	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013021	Chromosome_5A	3763	2	110	37.86872176454956	0.8199978605133975	0.5190952910641453	109	0	0.510013683293942	65	0	0.5456529647144416	44	0	0.7032348804500703	46	0	unmethylated (<10%)	Q14831	Metabotropic glutamate receptor 7 (mGluR7)	adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway [GO:0007196]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; axon development [GO:0061564]; chemical synaptic transmission [GO:0007268]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; negative regulation of glutamate secretion [GO:0014050]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of sound [GO:0007605]	hit with GO BP
GN013020	Chromosome_5A	1267	2	30	40.4104183109708	0.5814860709532332	25.523012552301257	30	0.03333333333333333	26.430517711171664	29	0.034482758620689655	3.896103896103896	1	0	12.189723320158103	52	0	sparse (10-50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN013004	Chromosome_5A	853	1	36	38.33528722157092	1.149251497005988	1.392515230635335	36	0	1.392515230635335	36	0	NA	NA	NA	1.3513513513513513	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013019	Chromosome_5A	237	1	8	36.28691983122363	1.0304347826086957	2.797202797202797	8	0	2.797202797202797	8	0	NA	NA	NA	1.849983181971073	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013018	Chromosome_5A	4736	4	51	35.66300675675676	0.33898362174224245	49.45355191256831	48	0.6458333333333334	35.47445255474452	10	0.5	52.67226890756302	38	0.6842105263157895	0.7977800901838363	42	0	sparse (10-50%)	Q9Z1P6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (Complex I-B14.5a) (CI-B14.5a) (NADH-ubiquinone oxidoreductase subunit B14.5a)	aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	hit with GO BP
GN013022	Chromosome_5A	333	1	15	42.64264264264264	1.0070564516129032	0	2	0	0	2	0	NA	NA	NA	2.544529262086514	32	0	NA	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN013023	Chromosome_5A	2217	4	41	31.078033378439333	0.7658998988877654	7.181136120042872	36	0	5.116279069767442	17	0	8.946322067594433	19	0	3.8128249566724435	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001569	Chromosome_5A	780	1	35	42.94871794871795	1	2.857142857142857	31	0	2.857142857142857	31	0	NA	NA	NA	0.6769825918762089	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013036	Chromosome_5A	189	1	4	46.03174603174603	0.42424242424242425	0.8	4	0	0.8	4	0	NA	NA	NA	0.6375674350171653	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013035	Chromosome_5A	2451	1	48	40.79967360261118	0.56130038788353	0.9409751924721984	36	0	0.9409751924721984	36	0	NA	NA	NA	0.800711743772242	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013034	Chromosome_5A	1520	4	41	37.76315789473684	0.7566320645905421	0.694815606627472	41	0	1.0822510822510822	20	0	0.3167898627243928	21	0	0.4645401052957572	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013033	Chromosome_5A	384	1	14	44.791666666666664	0.7277649925544876	0	14	0	0	14	0	NA	NA	NA	0.4014720642355303	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013032	Chromosome_5A	411	1	14	38.929440389294406	0.9105871182149075	0.11363636363636363	14	0	0.11363636363636363	14	0	NA	NA	NA	0.8534850640113798	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013031	Chromosome_5A	15331	9	323	35.522796947361556	0.6710127429618308	86.8353467135927	308	0.9577922077922078	70.09309542280837	39	0.8205128205128205	89.17497831743279	269	0.9776951672862454	53.96964389959136	43	0.6511627906976745	methylated (>=50%)	Q6NZZ9	Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22)	chordate embryonic development [GO:0043009]; mRNA cis splicing, via spliceosome [GO:0045292]; positive regulation of RNA splicing [GO:0033120]	hit with GO BP
GN013030	Chromosome_5A	16743	11	232	34.53383503553724	0.465505532136726	84.48064585886254	230	0.9782608695652174	82.063305978898	16	0.9375	84.63901689708142	214	0.9813084112149533	37.96384395813511	49	0.4489795918367347	methylated (>=50%)	Q9Y484	WD repeat domain phosphoinositide-interacting protein 4 (WIPI-4) (WD repeat-containing protein 45)	autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; autophagy of mitochondrion [GO:0000422]; cellular response to starvation [GO:0009267]; glycophagy [GO:0061723]; nucleophagy [GO:0044804]; pexophagy [GO:0000425]; positive regulation of autophagosome assembly [GO:2000786]; protein localization to phagophore assembly site [GO:0034497]	hit with GO BP
GN013029	Chromosome_5A	5705	8	58	33.77738825591587	0.35762149122617404	92.57707273271475	58	1	93.69747899159664	21	1	91.95722919572292	37	1	6.636624334289226	49	0.061224489795918366	methylated (>=50%)	Q9QYI4	DnaJ homolog subfamily B member 12 (mDj10)	cellular response to misfolded protein [GO:0071218]; ERAD pathway [GO:0036503]; protein folding [GO:0006457]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN013028	Chromosome_5A	3765	3	53	36.786188579017264	0.4180703959773727	54.841628959276015	53	0.5283018867924528	25.95656670113754	28	0.14285714285714285	77.31295253419147	25	0.96	1.721664275466284	36	0	methylated (>=50%)	Q8K4Y7	Soluble calcium-activated nucleotidase 1 (SCAN-1) (EC 3.6.1.6) (Apyrase homolog)	proteoglycan biosynthetic process [GO:0030166]	hit with GO BP
GN013027	Chromosome_5A	36693	14	1504	41.74093151282261	0.9410601770110701	0.7233273056057866	890	0	0.8550053437833987	53	0	0.711585501445408	837	0	0.6074924063449207	62	0	unmethylated (<10%)	Q5UR46	Uncharacterized protein R571 (EC 3.1.1.-)	lipid catabolic process [GO:0016042]	hit with GO BP
GN013026	Chromosome_5A	13760	13	340	33.713662790697676	0.8710858484298707	1.8777082330284063	331	0	0.5034324942791762	38	0	2.059607463048219	293	0	0.31023784901758017	50	0	unmethylated (<10%)	Q5UR46	Uncharacterized protein R571 (EC 3.1.1.-)	lipid catabolic process [GO:0016042]	hit with GO BP
GN013025	Chromosome_5A	3364	2	92	38.941736028537456	0.7242128121606949	0.6612298875909192	89	0	0.6744604316546763	88	0	0	1	0	0.39593733861249786	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013047	Chromosome_5A	12294	7	365	36.65202537823328	0.8857682645253887	0.8688824914943732	356	0	0.7231567363622072	119	0	0.9416195856873822	237	0	0.9149440867502542	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013046	Chromosome_5A	9065	6	158	35.42195256480971	0.5590699017908723	87.65832106038292	157	0.9490445859872612	75.76470588235294	15	0.8666666666666667	88.74129619710766	142	0.9577464788732394	0.6947771921418304	67	0	methylated (>=50%)	A4FV97	Ribosomal L1 domain-containing protein 1	regulation of apoptotic process [GO:0042981]; regulation of cellular senescence [GO:2000772]	hit with GO BP
GN013045	Chromosome_5A	699	1	11	42.77539341917024	0.34997724169321803	87.75773195876289	10	1	87.75773195876289	10	1	NA	NA	NA	92.04006325777543	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013044	Chromosome_5A	4304	2	120	34.526022304832715	0.93565217391304345	0.6599140577041129	120	0	1.0025062656641603	24	0	0.582816318856928	96	0	0.407955124936257	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013043	Chromosome_5A	2147	2	83	55.00698649278063	0.5523762584932798	1.3477088948787062	44	0	1.1928429423459244	42	0	2.803738317757009	2	0	0.6109414051652319	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013042	Chromosome_5A	246	1	7	44.3089430894309	0.5809716599190283	0.3508771929824561	7	0	0.3508771929824561	7	0	NA	NA	NA	0.5902383654937571	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013041	Chromosome_5A	849	1	41	42.87396937573616	1.0516631922414574	0.755939524838013	41	0	0.755939524838013	41	0	NA	NA	NA	1.1399466407955372	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013040	Chromosome_5A	361	2	7	36.8421052631579	0.580919540229885	0.468384074941452	7	0	0.7142857142857143	5	0	0	2	0	0.6773101112723754	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013049	Chromosome_5A	19153	12	283	35.587114290189525	0.4669757381578858	79.53432549207874	283	0.8833922261484098	71.11853088480801	24	0.75	80.04788101059495	259	0.8957528957528957	0.5845104724792985	66	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013050	Chromosome_5A	2915	3	38	36.946826758147516	0.38338536511078963	84.38775510204081	38	1	83.81421534130894	31	1	85.89981447124305	7	1	80.06509357200976	36	0.9722222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013051	Chromosome_5A	855	1	22	42.80701754385965	0.5620965814009085	55.5992141453831	22	0.5	55.5992141453831	22	0.5	NA	NA	NA	18.32535885167464	43	0.20930232558139536	methylated (>=50%)	P18870	Transcription factor Jun (Proto-oncogene c-Jun) (Transcription factor AP-1 subunit Jun)	host-mediated activation of viral transcription [GO:0043923]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell cycle [GO:0051726]; regulation of cell population proliferation [GO:0042127]; response to steroid hormone [GO:0048545]	hit with GO BP
GN002929	Chromosome_5A	378	1	9	42.592592592592595	0.5284249767008388	63.63636363636363	1	1	63.63636363636363	1	1	NA	NA	NA	10.910750970098151	54	0.18518518518518517	NA	NA	NA	NA	no Swiss-Prot hit
GN013052	Chromosome_5A	585	1	12	44.27350427350427	0.41935483870967744	79.23875432525952	11	0.9090909090909091	79.23875432525952	11	0.9090909090909091	NA	NA	NA	20.161290322580644	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013057	Chromosome_5A	4679	5	93	35.3921778157726	0.6411525059120813	85.71905238571905	92	0.967391304347826	95.61304836895388	22	1	83.99608227228208	70	0.9571428571428572	93.40836012861736	29	1	methylated (>=50%)	Q6AYA1	H/ACA ribonucleoprotein complex subunit 1 (Nucleolar protein family A member 1) (snoRNP protein GAR1)	snoRNA guided rRNA pseudouridine synthesis [GO:0000454]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN013060	Chromosome_5A	1653	1	47	47.428917120387176	0.5066584061562541	96.10223642172524	47	1	96.10223642172524	47	1	NA	NA	NA	95.58528428093645	24	1	methylated (>=50%)	P14866	Heterogeneous nuclear ribonucleoprotein L (hnRNP L)	mRNA processing [GO:0006397]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; RNA processing [GO:0006396]	hit with GO BP
GN006067	Chromosome_5A	244	1	11	52.049180327868854	0.6924664602683178	0.4914004914004914	11	0	0.4914004914004914	11	0	NA	NA	NA	5.871559633027523	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013061	Chromosome_5A	3941	7	49	38.01065719360568	0.34770857941286626	92.64173703256937	49	1	95.82309582309583	20	1	91.09384339509863	29	1	94.6938775510204	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013073	Chromosome_5A	1580	2	25	31.518987341772153	0.6388277914348557	92.44102070293692	25	1	91.11842105263158	5	1	92.66779469825156	20	1	95.91280653950953	12	1	methylated (>=50%)	Q32NW2	Leukocyte receptor cluster member 8 homolog	NA	hit, no GO BP
GN013072	Chromosome_5A	7217	2	198	34.73742552307053	0.9424206211022824	0.6068097539049332	191	0	0.6489292667099286	45	0	0.5979885838543082	146	0	0.45757071547420963	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001686	Chromosome_5A	2284	3	68	37.87215411558669	0.8719221225424699	0.3923278116826504	56	0	0.30349013657056145	33	0	0.5122950819672131	23	0	0.46922439966878277	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013070	Chromosome_5A	558	1	21	48.028673835125446	0.6620338983050847	0.7957559681697612	21	0	0.7957559681697612	21	0	NA	NA	NA	0.8644400785854617	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013069	Chromosome_5A	399	1	19	37.84461152882206	1.351336898395722	0.2777777777777778	19	0	0.2777777777777778	19	0	NA	NA	NA	1.2627291242362526	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013068	Chromosome_5A	2211	2	79	37.268204432383534	1.0309821744776295	0.7013757755597518	79	0	0.6631299734748011	46	0	0.7276034561164165	33	0	0.9523809523809523	61	0	unmethylated (<10%)	P43114	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to glucose stimulus [GO:0071333]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; female pregnancy [GO:0007565]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to amino acid [GO:0043200]; response to interleukin-1 [GO:0070555]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to nematode [GO:0009624]; response to progesterone [GO:0032570]; response to prostaglandin E [GO:0034695]; response to salt [GO:1902074]; response to water-immersion restraint stress [GO:1990785]; response to xenobiotic stimulus [GO:0009410]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN013067	Chromosome_5A	774	1	28	43.92764857881137	0.75	1.1527377521613833	28	0	1.1527377521613833	28	0	NA	NA	NA	0.526742301458671	78	0	unmethylated (<10%)	Q8MJ08	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cellular response to prostaglandin E stimulus [GO:0071380]; inflammatory response [GO:0006954]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytosolic calcium ion concentration [GO:0007204]	hit with GO BP
GN013066	Chromosome_5A	414	1	11	44.44444444444444	0.5411764705882353	0.6896551724137931	11	0	0.6896551724137931	11	0	NA	NA	NA	0.7863299561469832	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013065	Chromosome_5A	357	1	9	39.77591036414566	0.6455696202531646	0.48426150121065376	9	0	0.48426150121065376	9	0	NA	NA	NA	0.693148493735004	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013064	Chromosome_5A	819	1	28	41.391941391941394	0.7982456140350878	0.7722007722007722	28	0	0.7722007722007722	28	0	NA	NA	NA	0.6354970494779846	67	0	unmethylated (<10%)	P32240	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; MAPK cascade [GO:0000165]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of peptide secretion [GO:0002792]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of substance P secretion, neurotransmission [GO:1904496]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to lipopolysaccharide [GO:0032496]; response to nematode [GO:0009624]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN013063	Chromosome_5A	4495	5	126	35.32814238042269	0.8990071349772617	0.5488297013720742	124	0	0.91324200913242	14	0	0.5055976886962803	110	0	0.44736057262153295	48	0	unmethylated (<10%)	O97508	Thioredoxin (Trx)	cellular homeostasis [GO:0019725]; positive regulation of DNA binding [GO:0043388]; response to radiation [GO:0009314]	hit with GO BP
GN013062	Chromosome_5A	1816	2	63	40.363436123348016	0.8527346719735254	0.11355034065102196	63	0	0.09021199819576003	58	0	0.23529411764705882	5	0	0.6382978723404256	37	0	unmethylated (<10%)	P43114	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cAMP biosynthetic process [GO:0006171]; cAMP/PKA signal transduction [GO:0141156]; cellular response to glucose stimulus [GO:0071333]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; chemokinesis [GO:0042466]; ductus arteriosus closure [GO:0097070]; ERK1 and ERK2 cascade [GO:0070371]; female pregnancy [GO:0007565]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; maternal process involved in female pregnancy [GO:0060135]; negative regulation of circadian sleep/wake cycle, REM sleep [GO:0042322]; negative regulation of circadian sleep/wake cycle, wakefulness [GO:1904326]; negative regulation of cytokine production [GO:0001818]; negative regulation of ductus arteriosus closure [GO:1904336]; negative regulation of endothelin production [GO:1904471]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; negative regulation of interleukin-1 alpha production [GO:0032690]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of mucus secretion [GO:0070256]; negative regulation of small intestine smooth muscle contraction [GO:1904348]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of antral ovarian follicle growth [GO:2000388]; positive regulation of bone resorption [GO:0045780]; positive regulation of calcitonin secretion [GO:1904364]; positive regulation of cell adhesion [GO:0045785]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of chemokinesis [GO:1904367]; positive regulation of chondrocyte differentiation [GO:0032332]; positive regulation of circadian sleep/wake cycle, non-REM sleep [GO:0046010]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of hippocampal neuron apoptotic process [GO:0110090]; positive regulation of hyaluronan biosynthetic process [GO:1900127]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of matrix metallopeptidase secretion [GO:1904466]; positive regulation of monoatomic ion transmembrane transport [GO:0034767]; positive regulation of mucus secretion [GO:0070257]; positive regulation of neutrophil extravasation [GO:2000391]; positive regulation of ossification [GO:0045778]; positive regulation of osteoblast differentiation [GO:0045669]; positive regulation of ovarian follicle development [GO:2000386]; positive regulation of protein modification process [GO:0031401]; positive regulation of protein secretion [GO:0050714]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of substance P secretion [GO:1904460]; positive regulation of urine volume [GO:0035810]; positive regulation of wound healing [GO:0090303]; regulation of ossification [GO:0030278]; regulation of stress fiber assembly [GO:0051492]; response to amino acid [GO:0043200]; response to interleukin-1 [GO:0070555]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to nematode [GO:0009624]; response to progesterone [GO:0032570]; response to prostaglandin E [GO:0034695]; response to salt [GO:1902074]; response to water-immersion restraint stress [GO:1990785]; response to xenobiotic stimulus [GO:0009410]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN013078	Chromosome_5A	720	2	34	44.02777777777778	0.9760765550239234	0.5911330049261084	34	0	0.6561679790026247	25	0	0.3952569169960474	9	0	0.27186225645672857	50	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN013084	Chromosome_5A	492	1	17	50	0.5558213716108453	NA	0	NA	NA	NA	NA	NA	NA	NA	3.4482758620689653	4	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013085	Chromosome_5A	219	1	2	47.03196347031963	0.2246153846153846	0.6369426751592356	2	0	0.6369426751592356	2	0	NA	NA	NA	1.2100677637947725	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013086	Chromosome_5A	549	1	15	45.537340619307834	0.5286979969183359	0.7194244604316546	15	0	0.7194244604316546	15	0	NA	NA	NA	0.3009781790820166	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013087	Chromosome_5A	492	1	17	49.796747967479675	0.5600642828445158	0.36231884057971014	16	0	0.36231884057971014	16	0	NA	NA	NA	1.5873015873015872	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020460	Chromosome_5A	3603	5	31	31.89009159034138	0.33854776035257245	40.57971014492754	15	0.26666666666666666	34.29752066115702	12	0.16666666666666666	62.77372262773723	3	0.6666666666666666	25.893250992501102	54	0.09259259259259259	sparse (10-50%)	Q6P3Z3	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]; nitrate metabolic process [GO:0042126]	hit with GO BP
GN003628	Chromosome_5A	225	1	4	42.22222222222222	0.4155124653739612	80.95238095238095	1	1	80.95238095238095	1	1	NA	NA	NA	82.45315161839864	12	1	NA	NA	NA	NA	no Swiss-Prot hit
GN013088	Chromosome_5A	15610	24	241	33.42729019859065	0.5643998466732828	78.78401747519796	170	0.9117647058823529	76.67953667953668	47	0.9148936170212766	79.43313088007622	123	0.9105691056910569	27.55203171456888	32	0.3125	methylated (>=50%)	Q6GPB9	Dynein axonemal intermediate chain 4 (WD repeat-containing protein 78)	cilium movement [GO:0003341]	hit with GO BP
GN013089	Chromosome_5A	819	1	13	36.87423687423687	0.4761627906976744	90.22082018927445	13	1	90.22082018927445	13	1	NA	NA	NA	78.8659793814433	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013090	Chromosome_5A	1354	2	28	39.438700147710485	0.5416541654165417	74.32590855803048	28	1	74.7112462006079	27	1	63.9344262295082	1	1	83.51401869158879	39	0.8974358974358975	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013091	Chromosome_5A	14446	10	297	37.06908486778347	0.598474765078615	77.24629892021302	296	0.8581081081081081	96.7741935483871	36	1	75.43644226149165	260	0.8384615384615385	97.12837837837837	59	1	methylated (>=50%)	Q7T105	Mesoderm induction early response protein 1 (Early response 1) (Er1) (Mi-er1) (Xmi-er1)	chromatin remodeling [GO:0006338]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN013092	Chromosome_5A	4937	7	157	40.4699210046587	0.7795681297018948	0.3787878787878788	147	0	0.4030632809351068	89	0	0.3487792725460887	58	0	0.5115961800818554	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013493	Chromosome_5A	969	1	44	43.550051599587206	0.9576819407008086	0.31645569620253167	44	0	0.31645569620253167	44	0	NA	NA	NA	10.64897812836142	50	0.04	unmethylated (<10%)	P25102	Histamine H2 receptor (H2R) (HH2R) (Gastric receptor I)	cellular response to histamine [GO:0071420]; chemical synaptic transmission [GO:0007268]; digestive tract development [GO:0048565]; epithelial cell morphogenesis [GO:0003382]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; gastric acid secretion [GO:0001696]; gastrin-induced gastric acid secretion [GO:0001698]; gland development [GO:0048732]; histamine-induced gastric acid secretion [GO:0001697]; memory [GO:0007613]; negative regulation of arachidonate secretion [GO:1900139]; positive regulation of vasoconstriction [GO:0045907]; regulation of synaptic plasticity [GO:0048167]; visual learning [GO:0008542]	hit with GO BP
GN013494	Chromosome_5A	5682	3	162	35.28687082013376	0.9168623935454953	0.48727666486193827	162	0	0.4225352112676056	19	0	0.49266862170087977	143	0	0.42771599657827203	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013495	Chromosome_5A	1983	3	67	36.7624810892587	1.0000526894184594	0.39611091105509544	67	0	0.3194888178913738	19	0	0.41841004184100417	48	0	0.5475166210402815	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013496	Chromosome_5A	912	1	61	50.87719298245614	1.0359197810178202	0.5988023952095808	51	0	0.5988023952095808	51	0	NA	NA	NA	0.5379557680812911	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013497	Chromosome_5A	933	1	61	49.732047159699896	1.0612553143880064	0.8849557522123894	61	0	0.8849557522123894	61	0	NA	NA	NA	0.547808764940239	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013498	Chromosome_5A	5988	16	106	37.274549098196395	0.5102905802600944	92.10358056265984	104	1	92.37835998638992	58	1	91.86011456135061	46	1	18.526622902990518	19	0.21052631578947367	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013499	Chromosome_5A	483	1	26	58.799171842650104	0.7527423125337169	2.5641025641025643	8	0	2.5641025641025643	8	0	NA	NA	NA	3.3218785796105386	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013500	Chromosome_5A	17919	14	241	34.99079189686925	0.4394943993577865	81.99347374666272	240	0.9083333333333333	79.81927710843374	32	0.84375	82.23099703849951	208	0.9182692307692307	58.86116442738324	43	0.5581395348837209	methylated (>=50%)	Q5R7U7	Dynactin subunit 4 (Dynactin subunit p62)	NA	hit, no GO BP
GN013501	Chromosome_5A	1011	2	21	43.62017804154303	0.4380777484318257	84.31703204047217	21	0.7619047619047619	79.95594713656388	18	0.7222222222222222	98.56115107913669	3	1	36.74596431605777	43	0.27906976744186046	methylated (>=50%)	I3PFJ3	4,5-DOPA dioxygenase extradiol 1 (EC 1.13.11.29)	NA	hit, no GO BP
GN013502	Chromosome_5A	24357	20	395	36.76150593258612	0.4801873731031605	88.95603156708005	390	0.982051282051282	91.70792079207921	104	0.9903846153846154	88.34298318169286	286	0.9790209790209791	47.32415902140673	21	0.5238095238095238	methylated (>=50%)	Q04861	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]	canonical NF-kappaB signal transduction [GO:0007249]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN013503	Chromosome_5A	1470	1	38	42.44897959183673	0.5803334891693938	90.97516656571774	38	1	90.97516656571774	38	1	NA	NA	NA	25.690376569037657	24	0.08333333333333333	methylated (>=50%)	Q8N6G5	Chondroitin sulfate N-acetylgalactosaminyltransferase 2 (EC 2.4.1.174) (Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2) (Beta4GalNAcT-2) (GalNAcT-2)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; dermatan sulfate proteoglycan biosynthetic process [GO:0050651]; proteoglycan biosynthetic process [GO:0030166]	hit with GO BP
GN013504	Chromosome_5A	546	1	23	47.43589743589744	0.7547782185358817	32.553606237816766	23	0.2608695652173913	32.553606237816766	23	0.2608695652173913	NA	NA	NA	36.19361936193619	36	0.19444444444444445	sparse (10-50%)	P00357	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (EC 1.2.1.12)	glucose metabolic process [GO:0006006]; glyceraldehyde-3-phosphate metabolic process [GO:0019682]; glycolytic process [GO:0006096]	hit with GO BP
GN013510	Chromosome_5A	852	1	41	43.309859154929576	1.0377896613190731	45.02388535031847	41	0.36585365853658536	45.02388535031847	41	0.36585365853658536	NA	NA	NA	4.539722572509458	52	0.11538461538461539	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013509	Chromosome_5A	8490	4	187	37.34982332155477	0.6339605734767025	81.10401459854015	187	0.9090909090909091	43.08755760368663	8	0.625	82.67148014440433	179	0.9217877094972067	31.385006353240154	21	0.3333333333333333	methylated (>=50%)	Q2KHY5	Fanconi anemia core complex-associated protein 24 (Fanconi anemia-associated protein of 24 kDa)	interstrand cross-link repair [GO:0036297]	hit with GO BP
GN013508	Chromosome_5A	9521	9	132	36.981409515807165	0.40643033160641867	78.78298330640818	122	0.8442622950819673	81.77159590043924	28	0.8214285714285714	77.81212841854935	94	0.851063829787234	38.91779396462019	18	0.3333333333333333	methylated (>=50%)	P52564	Dual specificity mitogen-activated protein kinase kinase 6 (MAP kinase kinase 6) (MAPKK 6) (EC 2.7.12.2) (MAPK/ERK kinase 6) (MEK 6) (Stress-activated protein kinase kinase 3) (SAPK kinase 3) (SAPKK-3) (SAPKK3)	bone development [GO:0060348]; cellular senescence [GO:0090398]; MAPK cascade [GO:0000165]; negative regulation of cold-induced thermogenesis [GO:0120163]; nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0035872]; osteoblast differentiation [GO:0001649]; p38MAPK cascade [GO:0038066]; regulation of cell cycle [GO:0051726]; regulation of signal transduction by p53 class mediator [GO:1901796]; signal transduction [GO:0007165]; signal transduction in response to DNA damage [GO:0042770]; stress-activated MAPK cascade [GO:0051403]; stress-activated protein kinase signaling cascade [GO:0031098]	hit with GO BP
GN013507	Chromosome_5A	615	1	7	37.39837398373984	0.33115384615384613	0.6666666666666666	7	0	0.6666666666666666	7	0	NA	NA	NA	0.5908419497784343	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013517	Chromosome_5A	242	1	4	41.32231404958678	0.3896940418679549	0.5649717514124294	4	0	0.5649717514124294	4	0	NA	NA	NA	4.491141326740832	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013506	Chromosome_5A	756	1	14	40.21164021164021	0.47083945015347656	33.2099907493062	14	0.14285714285714285	33.2099907493062	14	0.14285714285714285	NA	NA	NA	33.47514987429898	58	0.10344827586206896	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013505	Chromosome_5A	384	1	8	43.75	0.43593018305661985	15.053763440860216	8	0	15.053763440860216	8	0	NA	NA	NA	30.03200903784598	71	0.07042253521126761	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002145	Chromosome_5A	268	1	11	45.149253731343286	0.8701298701298701	36.79332715477294	11	0	36.79332715477294	11	0	NA	NA	NA	22.86928267933017	65	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011195	Chromosome_5A	717	1	27	41.98047419804742	0.8562898089171974	5.411764705882353	21	0	5.411764705882353	21	0	NA	NA	NA	0.6289308176100629	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013526	Chromosome_5A	541	2	15	46.950092421441774	0.5123106060606061	0.7125890736342043	15	0	0.7496251874062968	12	0	0.5714285714285714	3	0	0.8169934640522876	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013520	Chromosome_5A	885	2	19	38.644067796610166	0.5795078577336642	43.333333333333336	4	0.75	43.333333333333336	4	0.75	NA	NA	NA	10.970907816333684	41	0.07317073170731707	NA	NA	NA	NA	no Swiss-Prot hit
GN013527	Chromosome_5A	846	2	23	39.59810874704492	0.6957734391761424	NA	0	NA	NA	NA	NA	NA	NA	NA	1.2698412698412698	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN005033	Chromosome_5A	223	1	12	48.4304932735426	0.9291666666666667	1.3761467889908257	5	0	1.3761467889908257	5	0	NA	NA	NA	0.4918032786885246	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013521	Chromosome_5A	267	1	3	39.325842696629216	0.2966666666666667	0	1	0	0	1	0	NA	NA	NA	27.488151658767773	23	0.08695652173913043	NA	NA	NA	NA	no Swiss-Prot hit
GN013528	Chromosome_5A	1243	2	29	41.995172968624296	0.5344651197271851	25.058275058275058	21	0.09523809523809523	23.142857142857142	17	0.058823529411764705	33.54430379746835	4	0.25	24.420401854714065	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013529	Chromosome_5A	741	3	7	44.534412955465584	0.19058641975308643	90.36144578313252	7	1	92.94117647058823	5	1	84.81012658227849	2	1	89.08857509627728	19	1	methylated (>=50%)	Q7T102	Vacuolar fusion protein CCZ1 homolog	vacuolar transport [GO:0007034]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN013530	Chromosome_5A	486	1	19	47.325102880658434	0.6982758620689655	NA	0	NA	NA	NA	NA	NA	NA	NA	95.01557632398755	11	1	NA	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN013531	Chromosome_5A	426	1	21	46.478873239436616	0.9342105263157895	NA	0	NA	NA	NA	NA	NA	NA	NA	92.9159802306425	15	1	NA	NA	NA	NA	no Swiss-Prot hit
GN013532	Chromosome_5A	30500	9	356	35.84590163934426	0.36407145215756426	64.73338864167735	261	0.5977011494252874	20.199004975124378	34	0.17647058823529413	68.38583319732332	227	0.6607929515418502	81.95686480799579	48	0.7916666666666666	methylated (>=50%)	A5PKG7	BTB/POZ domain-containing protein KCTD5	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]	hit with GO BP
GN013533	Chromosome_5A	207	1	7	49.27536231884058	0.5625	95.29411764705883	7	1	95.29411764705883	7	1	NA	NA	NA	82.71468144044321	39	0.8974358974358975	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013534	Chromosome_5A	1254	1	41	41.068580542264755	0.7782217782217782	93.0957683741648	41	0.9512195121951219	93.0957683741648	41	0.9512195121951219	NA	NA	NA	87.33056708160443	54	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013535	Chromosome_5A	282	1	7	46.09929078014184	0.46821631878557873	96.6789667896679	7	1	96.6789667896679	7	1	NA	NA	NA	82.77752398355413	36	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013536	Chromosome_5A	3208	7	63	36.50249376558604	0.59042254837805	77.42193755004003	63	0.7936507936507936	63.03664921465968	20	0.6	82.34240687679083	43	0.8837209302325582	24.796010879419764	52	0.019230769230769232	methylated (>=50%)	Q6TCH7	Progestin and adipoQ receptor family member 3 (Progestin and adipoQ receptor family member III) (Raf kinase trapping to Golgi) (RKTG)	negative regulation of MAP kinase activity [GO:0043407]; negative regulation of neuron projection development [GO:0010977]; negative regulation of peptidyl-serine phosphorylation [GO:0033137]; negative regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035359]; negative regulation of protein phosphorylation [GO:0001933]; positive regulation of cholesterol biosynthetic process [GO:0045542]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of SREBP signaling pathway [GO:2000640]; protein localization to Golgi apparatus [GO:0034067]	hit with GO BP
GN013537	Chromosome_5A	20289	17	249	36.216669131056236	0.37465359848215174	87.63525008506295	249	0.9357429718875502	90.78057775046098	81	0.9629629629629629	86.74066952189494	168	0.9226190476190477	24.731644482610562	46	0.34782608695652173	methylated (>=50%)	Q2M2I8	AP2-associated protein kinase 1 (EC 2.7.11.1) (Adaptor-associated kinase 1)	membrane organization [GO:0061024]; positive regulation of Notch signaling pathway [GO:0045747]; protein phosphorylation [GO:0006468]; protein stabilization [GO:0050821]; regulation of clathrin-dependent endocytosis [GO:2000369]; regulation of protein localization [GO:0032880]	hit with GO BP
GN013491	Chromosome_5A	385	1	14	50.12987012987013	0.600891861761427	85.91549295774648	14	0.9285714285714286	85.91549295774648	14	0.9285714285714286	NA	NA	NA	79.6496651210716	54	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013486	Chromosome_5A	7719	9	89	36.80528565876409	0.34137589705518434	49.50473255558001	85	0.4588235294117647	53.21869488536155	47	0.46808510638297873	45.8021978021978	38	0.4473684210526316	9.79020979020979	20	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013485	Chromosome_5A	5856	5	59	34.35792349726776	0.34146110056925993	65.52440290758048	59	0.7627118644067796	71.42857142857143	5	0.8	65.04908835904628	54	0.7592592592592593	8.122605363984674	30	0	methylated (>=50%)	Q9UBL3	Set1/Ash2 histone methyltransferase complex subunit ASH2 (ASH2-like protein)	DNA damage response [GO:0006974]; hemopoiesis [GO:0030097]; positive regulation of cell population proliferation [GO:0008284]; response to estrogen [GO:0043627]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN013538	Chromosome_5A	26278	16	429	37.65126721972753	0.4620722621102501	83.41120321527255	335	0.8955223880597015	72.16174183514775	65	0.7692307692307693	85.57819053325345	270	0.9259259259259259	0.4088785046728972	27	0	methylated (>=50%)	Q8BL48	RING finger protein unkempt homolog (Zinc finger CCCH domain-containing protein 5)	cell morphogenesis involved in neuron differentiation [GO:0048667]; in utero embryonic development [GO:0001701]; negative regulation of cytoplasmic translation [GO:2000766]; neuron migration [GO:0001764]	hit with GO BP
GN018486	Chromosome_5A	1027	3	26	42.064264849074974	0.5733118625872249	NA	0	NA	NA	NA	NA	NA	NA	NA	48.288288288288285	16	0.25	NA	NA	NA	NA	no Swiss-Prot hit
GN013539	Chromosome_5A	47649	36	621	35.4530000629604	0.4173617022789111	89.38352677662391	621	0.9726247987117552	88.3127572016461	70	0.9714285714285714	89.49302808405578	551	0.9727767695099818	3.540587219343696	23	0	methylated (>=50%)	O70157	DNA topoisomerase 3-alpha (EC 5.6.2.1) (DNA topoisomerase III alpha)	chromosome separation [GO:0051304]; DNA topological change [GO:0006265]; double-strand break repair via homologous recombination [GO:0000724]; mitochondrial DNA metabolic process [GO:0032042]; resolution of DNA recombination intermediates [GO:0071139]	hit with GO BP
GN013475	Chromosome_5A	1104	2	28	42.028985507246375	0.5774166433174559	94.0688775510204	28	1	94.25837320574162	26	1	91.42857142857143	2	1	89.1891891891892	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013477	Chromosome_5A	1118	3	17	35.3309481216458	0.48863636363636365	92.83018867924528	17	1	93.76623376623377	11	1	91.53153153153153	6	1	74.28571428571429	27	0.8518518518518519	methylated (>=50%)	Q8MJK1	Protein chibby homolog 1 (Cytosolic leucine-rich protein) (PIGEA-14) (PKD2 interactor, Golgi and endoplasmic reticulum-associated 1)	cardiac muscle cell differentiation [GO:0055007]; fat cell differentiation [GO:0045444]; negative regulation of Wnt signaling pathway [GO:0030178]	hit with GO BP
GN013541	Chromosome_5A	28545	17	465	36.48975302154493	0.48941750120562166	84.88385944014294	440	0.9840909090909091	91.74903308981521	54	1	84.18496806369761	386	0.9818652849740933	84.76190476190476	9	1	methylated (>=50%)	Q5M7W4	Transmembrane channel-like protein 5	NA	hit, no GO BP
GN013542	Chromosome_5A	22565	23	346	35.280301351650785	0.4947044537080863	80.55838795824229	346	0.930635838150289	86.3905325443787	97	0.9587628865979382	78.73709697973747	249	0.9196787148594378	0.804953560371517	36	0	methylated (>=50%)	Q8IVV2	Lipoxygenase homology domain-containing protein 1	sensory perception of sound [GO:0007605]	hit with GO BP
GN013479	Chromosome_5A	12891	14	169	34.760685749747886	0.4390952527029026	87.76743015353637	167	0.9101796407185628	88.85383806519454	41	0.8536585365853658	87.56114605171209	126	0.9285714285714286	0.5612413337735226	55	0	methylated (>=50%)	A6H8I2	Small G protein signaling modulator 3 homolog (RUN and TBC1 domain-containing protein 3)	NA	hit, no GO BP
GN013480	Chromosome_5A	4087	6	65	36.72620504037191	0.47237632917244565	93.61826697892272	65	1	95.45454545454545	11	1	93.2658757850663	54	1	94.9367088607595	25	1	methylated (>=50%)	Q7T2D0	Small G protein signaling modulator 3 (RUN and TBC1 domain-containing protein 3)	NA	hit, no GO BP
GN013544	Chromosome_5A	472	1	0	50	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.364256480218281	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013481	Chromosome_5A	432	1	0	49.76851851851852	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.390922401171303	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013545	Chromosome_5A	1629	2	53	39.103744628606506	0.8574876348250998	0.6157635467980296	53	0	0.68359375	20	0	0.56657223796034	33	0	0.2905441098784997	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013546	Chromosome_5A	750	1	27	42.8	0.7934952978056427	0.12195121951219512	27	0	0.12195121951219512	27	0	NA	NA	NA	0.6269592476489029	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013547	Chromosome_5A	1101	1	52	41.59854677565849	1.092762253779203	1.408450704225352	52	0	1.408450704225352	52	0	NA	NA	NA	1.3939838591342626	72	0	unmethylated (<10%)	Q9VZW5	FMRFamide receptor (DFR) (DrmFMRFa-R)	adult locomotory behavior [GO:0008344]; behavioral defense response [GO:0002209]; flight behavior [GO:0007629]; G protein-coupled receptor signaling pathway [GO:0007186]; larval locomotory behavior [GO:0008345]; neuropeptide signaling pathway [GO:0007218]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of synaptic transmission, dopaminergic [GO:0032226]	hit with GO BP
GN013548	Chromosome_5A	25915	27	698	36.02160910669497	0.8307220382467013	0.6073097004671613	685	0	0.6311745334796927	162	0	0.6013332417016013	523	0	0.30343897505057316	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013549	Chromosome_5A	258	1	14	44.57364341085271	1.1666666666666667	0.6369426751592356	14	0	0.6369426751592356	14	0	NA	NA	NA	0	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013103	Chromosome_5A	359	1	20	43.45403899721448	1.1803386486930791	0.34965034965034963	20	0	0.34965034965034963	20	0	NA	NA	NA	0.9096244131455399	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013102	Chromosome_5A	783	1	37	46.36015325670498	0.8802564414195431	0.5719733079122974	37	0	0.5719733079122974	37	0	NA	NA	NA	0.68359375	65	0	unmethylated (<10%)	P25931	RYamide receptor (Neuropeptide Y-like receptor) (NPY-R)	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN013101	Chromosome_5A	420	1	27	45.95238095238095	1.218045112781955	0.8883248730964467	27	0	0.8883248730964467	27	0	NA	NA	NA	0.3333333333333333	69	0	unmethylated (<10%)	P49683	Prolactin-releasing peptide receptor (PrRP receptor) (PrRPR) (G protein-coupled receptor 10) (hGR3)	feeding behavior [GO:0007631]; female pregnancy [GO:0007565]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN013100	Chromosome_5A	603	1	24	42.45439469320066	0.883354696941952	0.3870967741935484	24	0	0.3870967741935484	24	0	NA	NA	NA	0.31289111389236546	41	0	unmethylated (<10%)	P25931	RYamide receptor (Neuropeptide Y-like receptor) (NPY-R)	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN013099	Chromosome_5A	264	1	16	47.34848484848485	1.112750263435195	1.2012012012012012	16	0	1.2012012012012012	16	0	NA	NA	NA	2.473237356958287	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013098	Chromosome_5A	291	1	17	47.07903780068729	1.0547974413646055	0	17	0	0	17	0	NA	NA	NA	0.4039044092898014	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013097	Chromosome_5A	14891	14	405	35.60539923443691	0.8610482311393993	0.8176459402928313	404	0	0.6424965580541533	105	0	0.8634128792421154	299	0	0.48632218844984804	72	0	unmethylated (<10%)	D3ZWJ9	Protein FAM234B	NA	hit, no GO BP
GN013096	Chromosome_5A	538	2	15	40.14869888475837	0.6933585359566973	0.24330900243309003	15	0	0.24330900243309003	15	0	NA	NA	NA	0.599647266313933	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013104	Chromosome_5A	835	3	20	36.64670658682635	0.7164614526577717	0.9489916963226572	20	0	1.0401188707280833	17	0	0.5882352941176471	3	0	1.049618320610687	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013105	Chromosome_5A	585	1	0	50.427350427350426	0	NA	0	NA	NA	NA	NA	NA	NA	NA	85.4778028592927	21	0.9523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN013551	Chromosome_5A	330	1	11	42.72727272727273	0.7306763285024155	89.06942392909896	11	1	89.06942392909896	11	1	NA	NA	NA	89.9364406779661	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013552	Chromosome_5A	9145	12	181	35.352651722252595	0.6448013331972504	82.8709917971663	179	0.888268156424581	73.59212684527064	37	0.7297297297297297	84.3364130904067	142	0.9295774647887324	1.148105625717566	29	0	methylated (>=50%)	P00367	Glutamate dehydrogenase 1, mitochondrial (GDH 1) (EC 1.4.1.3)	L-glutamate biosynthetic process [GO:0097054]; L-glutamate catabolic process [GO:0006538]; L-glutamine metabolic process [GO:0006541]; positive regulation of insulin secretion [GO:0032024]; substantia nigra development [GO:0021762]; tricarboxylic acid metabolic process [GO:0072350]	hit with GO BP
GN013108	Chromosome_5A	20485	9	357	34.3129118867464	0.5920756060619309	66.56299907539716	337	0.6231454005934718	81.37254901960785	25	0.88	65.54527488321955	312	0.6025641025641025	22.886801779535343	37	0.4864864864864865	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013553	Chromosome_5A	5897	4	50	36.34051212480922	0.2659396956823696	85.36096256684492	50	0.94	76.49253731343283	4	1	86.23348017621146	46	0.9347826086956522	81.15313081215128	22	0.8181818181818182	methylated (>=50%)	A2BHJ4	CCR4-NOT transcription complex subunit 6-like (EC 3.1.13.4)	nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]	hit with GO BP
GN013554	Chromosome_5A	1229	4	27	40.03254678600488	0.548560942950191	NA	0	NA	NA	NA	NA	NA	NA	NA	2.1201413427561837	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013555	Chromosome_5A	16522	8	240	36.06706209901949	0.447828147326299	59.539308963445166	240	0.7208333333333333	73.3247835844822	67	0.8805970149253731	56.19506883409816	173	0.6589595375722543	6.451612903225806	3	0	methylated (>=50%)	Q8VEG6	CCR4-NOT transcription complex subunit 6-like (EC 3.1.13.4)	mRNA destabilization [GO:0061157]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cytoplasmic mRNA processing body assembly [GO:0010606]	hit with GO BP
GN013116	Chromosome_5A	1716	1	55	43.298368298368295	0.6873497924404632	0.6889763779527559	55	0	0.6889763779527559	55	0	NA	NA	NA	0.6457046603032004	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013556	Chromosome_5A	1071	3	26	36.60130718954248	0.7275815217391305	NA	0	NA	NA	NA	NA	NA	NA	NA	1.932367149758454	23	0	NA	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN013114	Chromosome_5A	1709	3	13	33.703920421299	0.2736757822123676	39.53313253012048	13	0.07692307692307693	39.68095712861416	9	0	39.07692307692308	4	0.25	12.72784412319296	49	0.02040816326530612	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013113	Chromosome_5A	5820	5	61	34.62199312714777	0.34997821385125877	65.59378468368479	49	0.8367346938775511	67.82820097244732	16	0.9375	64.43037974683544	33	0.7878787878787878	1.262272089761571	29	0	methylated (>=50%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN013112	Chromosome_5A	925	1	7	38.270270270270274	0.2070012787723785	61.56351791530945	7	0.7142857142857143	61.56351791530945	7	0.7142857142857143	NA	NA	NA	58.915211970074814	17	0.8235294117647058	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013111	Chromosome_5A	14462	15	398	37.85783432443645	0.7681759059292553	1.8372799472971488	397	0	1.1729622266401591	142	0	2.224410589121242	255	0	1.0927035600986958	51	0	unmethylated (<10%)	P09208	Insulin-like receptor (dIR) (dInr) (dmIR) (EC 2.7.10.1) (Insulin receptor homolog) (dIRH) (Receptor protein-tyrosine kinase InR) [Cleaved into: Insulin-like receptor subunit alpha; Insulin-like receptor subunit beta 1 (Insulin-like receptor subunit beta 170 kDa form) (beta170); Insulin-like receptor subunit beta 2 (Insulin-like receptor subunit beta 90 kDa form) (beta90); 60 kDa C-terminal fragment (Insulin-like receptor free C-terminus)]	axon guidance [GO:0007411]; carbohydrate homeostasis [GO:0033500]; cellular response to starvation [GO:0009267]; cholesterol homeostasis [GO:0042632]; circadian rhythm [GO:0007623]; determination of adult lifespan [GO:0008340]; developmental growth [GO:0048589]; embryo development ending in birth or egg hatching [GO:0009792]; embryonic development via the syncytial blastoderm [GO:0001700]; female germ-line stem cell asymmetric division [GO:0048132]; female germ-line stem cell population maintenance [GO:0036099]; female gonad development [GO:0008585]; female mating behavior [GO:0060180]; follicle cell of egg chamber development [GO:0030707]; germ-band shortening [GO:0007390]; germ-line stem cell division [GO:0042078]; germ-line stem-cell niche homeostasis [GO:0060250]; glucose homeostasis [GO:0042593]; imaginal disc growth [GO:0007446]; insulin receptor signaling pathway [GO:0008286]; intestinal stem cell homeostasis [GO:0036335]; lipid homeostasis [GO:0055088]; locomotory behavior [GO:0007626]; lymph gland development [GO:0048542]; male germ-line stem cell asymmetric division [GO:0048133]; multicellular organism growth [GO:0035264]; negative regulation of circadian sleep/wake cycle, sleep [GO:0042321]; negative regulation of entry into reproductive diapause [GO:0061964]; negative regulation of feeding behavior [GO:2000252]; negative regulation of macroautophagy [GO:0016242]; negative regulation of peptide hormone secretion [GO:0090278]; nervous system development [GO:0007399]; open tracheal system development [GO:0007424]; positive regulation of border follicle cell migration [GO:1903688]; positive regulation of cell growth [GO:0030307]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cell size [GO:0045793]; positive regulation of fat cell proliferation [GO:0070346]; positive regulation of lipid storage [GO:0010884]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of multicellular organism growth [GO:0040018]; positive regulation of neuroblast proliferation [GO:0002052]; positive regulation of neuron remodeling [GO:1904801]; positive regulation of organ growth [GO:0046622]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of TORC1 signaling [GO:1904263]; positive regulation of wound healing [GO:0090303]; primary spermatocyte growth [GO:0007285]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of cell population proliferation [GO:0042127]; regulation of multicellular organism growth [GO:0040014]; regulation of organ growth [GO:0046620]; response to anoxia [GO:0034059]; response to cocaine [GO:0042220]; response to oxidative stress [GO:0006979]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN013122	Chromosome_5A	21581	13	582	36.230943885825496	0.8227472635447167	0.8851900888972952	569	0	0.5547337278106509	62	0	0.9228435379882853	507	0	0.928891736066624	65	0	unmethylated (<10%)	Q9ERD9	Indoleamine 2,3-dioxygenase 1 (IDO-1) (EC 1.13.11.52) (Indoleamine-pyrrole 2,3-dioxygenase)	'de novo' NAD+ biosynthetic process from L-tryptophan [GO:0034354]; inflammatory response [GO:0006954]; kynurenic acid biosynthetic process [GO:0034276]; L-tryptophan catabolic process [GO:0006569]; multicellular organismal response to stress [GO:0033555]; negative regulation of activated T cell proliferation [GO:0046007]; negative regulation of interleukin-10 production [GO:0032693]; negative regulation of T cell apoptotic process [GO:0070233]; negative regulation of T cell proliferation [GO:0042130]; positive regulation of apoptotic process [GO:0043065]; positive regulation of chronic inflammatory response [GO:0002678]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of T cell apoptotic process [GO:0070234]; positive regulation of T cell tolerance induction [GO:0002666]; positive regulation of type 2 immune response [GO:0002830]; quinolinate biosynthetic process [GO:0019805]; response to lipopolysaccharide [GO:0032496]; swimming behavior [GO:0036269]	hit with GO BP
GN013558	Chromosome_5A	753	3	21	39.309428950863214	0.724602483618201	0.33407572383073497	21	0	0.291970802919708	17	0	0.4694835680751174	4	0	0.45300113250283125	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013559	Chromosome_5A	8746	10	161	34.61010747770409	0.6177117258127913	90.8418131359852	161	0.9751552795031055	92.00111482720179	57	0.9649122807017544	90.34084066000241	104	0.9807692307692307	22.412109375	43	0.16279069767441862	methylated (>=50%)	Q7SXM7	U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA-processing factor 31)	mRNA splicing, via spliceosome [GO:0000398]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; retina development in camera-type eye [GO:0060041]; spliceosomal tri-snRNP complex assembly [GO:0000244]	hit with GO BP
GN013125	Chromosome_5A	497	2	10	47.08249496981891	0.3630917592051432	2.1739130434782608	10	0	2.6315789473684212	8	0	0	2	0	0.48496605237633367	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013126	Chromosome_5A	14683	17	461	37.3152625485255	0.9024308397882864	1.029482841952634	396	0	0.631768953068592	94	0	1.1379013408783367	302	0	0.518000518000518	55	0	unmethylated (<10%)	Q6IR74	Choline transporter-like protein 1 (Solute carrier family 44 member 1)	choline transport [GO:0015871]; ethanolamine transport [GO:0034229]; transmembrane transport [GO:0055085]	hit with GO BP
GN013561	Chromosome_5A	12595	14	133	34.894799523620485	0.3469147987932066	82.43526026680617	132	0.9393939393939394	78.95196506550218	26	0.8846153846153846	83.04876172896478	106	0.9528301886792453	53.63809523809524	37	0.43243243243243246	methylated (>=50%)	Q8IUF1	Zinc-regulated GTPase metalloprotein activator 1B (EC 3.6.5.-) (Cobalamin synthase W domain-containing protein 2) (COBW domain-containing protein 2)	protein maturation [GO:0051604]	hit with GO BP
GN013562	Chromosome_5A	1149	1	64	47.4325500435161	1.0004897959183674	1.5641293013555788	48	0	1.5641293013555788	48	0	NA	NA	NA	0.6617820846135666	67	0	unmethylated (<10%)	C9JTQ0	Ankyrin repeat domain-containing protein 63	NA	hit, no GO BP
GN013563	Chromosome_5A	399	1	21	46.8671679197995	0.9597938144329897	1.340033500837521	21	0	1.340033500837521	21	0	NA	NA	NA	1.63727959697733	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013564	Chromosome_5A	2875	2	88	40.97391304347826	0.7300323176361958	3.248811410459588	88	0	1.461187214611872	59	0	4.618614415675298	29	0	0.9229098805646037	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013565	Chromosome_5A	30756	15	437	35.99947977630381	0.44198443942139526	73.94679572546855	433	0.8244803695150116	87.79989790709546	39	0.9743589743589743	73.00541140557792	394	0.8096446700507615	0.4219409282700422	32	0	methylated (>=50%)	P55809	Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial (SCOT) (EC 2.8.3.5) (3-oxoacid CoA-transferase 1) (Somatic-type succinyl-CoA:3-oxoacid CoA-transferase) (SCOT-s) (Succinyl-CoA:3-oxoacid CoA transferase)	adipose tissue development [GO:0060612]; heart development [GO:0007507]; ketone body catabolic process [GO:0046952]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; response to activity [GO:0014823]; response to ethanol [GO:0045471]; response to hormone [GO:0009725]; response to nutrient [GO:0007584]; response to starvation [GO:0042594]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN013129	Chromosome_5A	1342	2	80	51.4903129657228	0.899478878667538	0.9036144578313253	55	0	0.9174311926605505	54	0	0	1	0	0.19083969465648856	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013567	Chromosome_5A	924	1	6	41.666666666666664	0.1507177033492823	76.98412698412699	5	1	76.98412698412699	5	1	NA	NA	NA	79.92582290217895	37	0.918918918918919	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013568	Chromosome_5A	563	2	11	44.93783303730018	0.4092651334919376	73.04964539007092	5	0.8	68.69565217391305	4	0.75	92.3076923076923	1	1	7.187305538270069	57	0.017543859649122806	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013137	Chromosome_5A	768	1	41	47.135416666666664	0.9622001527883881	0.24937655860349128	41	0	0.24937655860349128	41	0	NA	NA	NA	0.43844856661045534	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013569	Chromosome_5A	3365	5	87	34.977711738484395	0.8453162627120112	1.5972372113101663	87	0	1.966955153422502	34	0	1.4574657941701368	53	0	0.5076142131979695	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013570	Chromosome_5A	1374	1	82	45.70596797671033	1.143884015594542	0.45824847250509165	82	0	0.45824847250509165	82	0	NA	NA	NA	0.4603748766853009	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013571	Chromosome_5A	1524	1	92	49.01574803149607	1.005464480874317	0.56657223796034	91	0	0.56657223796034	91	0	NA	NA	NA	0.7109004739336493	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013572	Chromosome_5A	6832	13	102	36.40222482435597	0.4506800323362975	70.33519553072625	102	0.8235294117647058	81.46048682894298	64	0.90625	56.263180092787856	38	0.6842105263157895	61.07341147439852	44	0.5909090909090909	methylated (>=50%)	Q3U6K5	Spermatogenesis-associated protein 6 (Kinesin-related protein)	motile cilium assembly [GO:0044458]; spermatogenesis [GO:0007283]	hit with GO BP
GN013141	Chromosome_5A	2008	5	25	35.756972111553786	0.38975155279503104	84.91895701198027	25	1	86.71497584541063	17	1	82.40270727580372	8	1	82.8125	33	0.8787878787878788	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013142	Chromosome_5A	3616	5	48	35.868362831858406	0.4127206060692528	75.92785293097468	48	0.7291666666666666	85.50404709345106	23	0.8695652173913043	67.38845144356955	25	0.6	60.89438629876308	27	0.5555555555555556	methylated (>=50%)	Q2NL11	Uncharacterized protein C8orf74 homolog	NA	hit, no GO BP
GN013143	Chromosome_5A	11301	8	206	35.14733209450491	0.590452049735819	93.4164425975719	206	0.970873786407767	96.59751037344398	30	1	93.07011203469462	176	0.9659090909090909	48.92915980230642	61	0.5409836065573771	methylated (>=50%)	B5FZ19	Eukaryotic translation initiation factor 3 subunit I (eIF3i) (Eukaryotic translation initiation factor 3 subunit 2) (eIF-3-beta) (eIF3 p36)	formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	hit with GO BP
GN013144	Chromosome_5A	384	1	7	41.927083333333336	0.41609907120743034	1.3574660633484164	7	0	1.3574660633484164	7	0	NA	NA	NA	2.2457627118644066	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013145	Chromosome_5A	765	1	6	39.6078431372549	0.21537162162162163	0.9302325581395349	6	0	0.9302325581395349	6	0	NA	NA	NA	0.7449605609114811	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013575	Chromosome_5A	1123	2	32	37.57791629563669	0.8074598359734861	0.8264462809917356	32	0	0.8264462809917356	32	0	NA	NA	NA	0.47619047619047616	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013576	Chromosome_5A	831	1	26	39.229843561973524	0.816923774954628	0.2807017543859649	26	0	0.2807017543859649	26	0	NA	NA	NA	2.9484029484029484	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013577	Chromosome_5A	1706	2	39	37.86635404454865	0.6471675356003423	0.5002273760800364	39	0	0.7547169811320755	15	0	0.3561253561253561	24	0	0.43591979075850046	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013578	Chromosome_5A	32285	34	298	35.05033297196841	0.3007325536965148	76.95968805550777	298	0.8691275167785235	83.10957124296232	105	0.9238095238095239	74.74455970673114	193	0.8393782383419689	0.8448800270361608	56	0	methylated (>=50%)	Q8AV57	Protein sidekick-2	camera-type eye photoreceptor cell differentiation [GO:0060219]; homophilic cell-cell adhesion [GO:0007156]; retina layer formation [GO:0010842]; synapse assembly [GO:0007416]	hit with GO BP
GN013579	Chromosome_5A	28634	19	420	35.367046168890134	0.4692499394234517	85.328976247378435	380	0.9657894736842105	92.54335260115607	31	1	84.66414531508016	349	0.9627507163323782	86.01747815230961	10	1	methylated (>=50%)	O13035	Prosaposin (Proactivator polypeptide) [Cleaved into: Saposin-A; Saposin-B; Saposin-C; Saposin-D]	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; epithelial cell differentiation involved in prostate gland development [GO:0060742]; prostate gland growth [GO:0060736]; regulation of lipid metabolic process [GO:0019216]; sphingolipid metabolic process [GO:0006665]	hit with GO BP
GN013580	Chromosome_5A	1842	1	23	41.31378935939197	0.2935600548788093	91.64733178654292	23	1	91.64733178654292	23	1	NA	NA	NA	81.69621466219454	36	0.8055555555555556	methylated (>=50%)	Q5XGZ9	Major facilitator superfamily domain-containing protein 6-like protein B	NA	hit, no GO BP
GN013155	Chromosome_5A	765	2	19	35.68627450980392	0.7824612403100775	14.204081632653061	19	0.15789473684210525	1.263157894736842	10	0	22.4	9	0.3333333333333333	54.463642908567316	51	0.5294117647058824	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013154	Chromosome_5A	222	1	3	45.945945945945944	0.48401162790697677	96.03960396039604	3	1	96.03960396039604	3	1	NA	NA	NA	92.85714285714286	9	1	NA	NA	NA	NA	no Swiss-Prot hit
GN013153	Chromosome_5A	4008	5	34	36.27744510978044	0.25905796068277603	92.6539058458355	34	1	93.15068493150685	6	1	92.56550883607557	28	1	92.95366795366796	14	1	methylated (>=50%)	Q66HY8	Pyridoxal-dependent decarboxylase domain-containing protein 1 (EC 4.1.1.-)	NA	hit, no GO BP
GN013152	Chromosome_5A	1494	2	21	42.16867469879518	0.31747027573994435	86.93834900731453	21	1	86.93834900731453	21	1	NA	NA	NA	37.20331712896769	48	0.375	methylated (>=50%)	F1R8Z9	Forkhead box protein J1-B	auditory receptor cell stereocilium organization [GO:0060088]; cilium assembly [GO:0060271]; determination of left/right symmetry [GO:0007368]; heart jogging [GO:0003146]; heart looping [GO:0001947]; motile cilium assembly [GO:0044458]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN013582	Chromosome_5A	15895	14	213	35.6527209814407	0.4221115282533521	89.95393726694451	209	0.9569377990430622	92.55547602004295	26	0.9615384615384616	89.65798045602605	183	0.9562841530054644	65.21229868228404	51	0.6666666666666666	methylated (>=50%)	Q9Y2W2	WW domain-binding protein 11 (WBP-11) (Npw38-binding protein) (NpwBP) (SH3 domain-binding protein SNP70) (Splicing factor that interacts with PQBP-1 and PP1)	RNA splicing [GO:0008380]	hit with GO BP
GN013583	Chromosome_5A	14557	20	151	34.37521467335303	0.35157994543578514	70.7260342249543	150	0.88	87.7348643006263	32	1	67.50642165579924	118	0.847457627118644	92.41450244278735	50	1	methylated (>=50%)	O54922	Exocyst complex component 7 (Exocyst complex component Exo70) (rExo70)	exocytosis [GO:0006887]; positive regulation of mitotic cytokinetic process [GO:1903438]; protein localization to ciliary membrane [GO:1903441]; protein transmembrane transport [GO:0071806]; regulation of entry of bacterium into host cell [GO:2000535]; regulation of synapse assembly [GO:0051963]	hit with GO BP
GN013149	Chromosome_5A	33250	32	309	36.19849624060151	0.2869671779151814	72.03056886066412	307	0.8892508143322475	71.90157958687728	63	0.8888888888888888	72.05834259925436	244	0.889344262295082	54.472934472934476	27	0.7407407407407407	methylated (>=50%)	Q5G270	Neurotrypsin (EC 3.4.21.-) (Serine protease 12)	exocytosis [GO:0006887]; zymogen activation [GO:0031638]	hit with GO BP
GN013584	Chromosome_5A	10812	5	313	36.34850166481687	0.87682793614997	0.6575265808617795	313	0	0.2194586686174104	42	0	0.7038440714672441	271	0	0.6182380216383307	42	0	unmethylated (<10%)	F1NV61	Caspase-7 (CASP-7) (EC 3.4.22.60) [Cleaved into: Caspase-7 subunit p20; Caspase-7 subunit p11]	apoptotic process [GO:0006915]; defense response to bacterium [GO:0042742]; execution phase of apoptosis [GO:0097194]; lymphocyte apoptotic process [GO:0070227]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of plasma membrane repair [GO:1905686]; proteolysis [GO:0006508]	hit with GO BP
GN013585	Chromosome_5A	23586	12	276	34.779106249470026	0.38797317810598236	88.33177903340831	274	0.9452554744525548	88.23529411764706	28	0.9642857142857143	88.33729629414835	246	0.943089430894309	49.9054820415879	58	0.4827586206896552	methylated (>=50%)	Q9V727	Polycomb group protein Asx (Protein additional sex combs)	animal organ morphogenesis [GO:0009887]; antennal development [GO:0007469]; anterior/posterior axis specification [GO:0009948]; apposition of dorsal and ventral imaginal disc-derived wing surfaces [GO:0007475]; cell fate determination [GO:0001709]; epigenetic regulation of gene expression [GO:0040029]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; sex comb development [GO:0045498]; syncytial blastoderm mitotic cell cycle [GO:0035186]	hit with GO BP
GN013586	Chromosome_5A	13328	20	191	35.12905162064826	0.464950301337127	80.81915846016115	191	0.9633507853403142	82.32445520581113	49	0.9795918367346939	80.40521259393132	142	0.9577464788732394	88.02336903602726	25	1	methylated (>=50%)	Q5BJE1	Coiled-coil domain-containing protein 178	manchette assembly [GO:1905198]; spermatid development [GO:0007286]	hit with GO BP
GN013587	Chromosome_5A	3606	3	33	37.160288408208544	0.2706443718670682	86.66053357865685	33	0.9696969696969697	83.15958299919808	17	0.9411764705882353	91.37001078748652	16	1	33.92421892311101	47	0.3617021276595745	methylated (>=50%)	Q9CXL3	Cholesin (Protein C7orf50 homolog)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; negative regulation of cholesterol biosynthetic process [GO:0045541]; positive regulation of cholesterol biosynthetic process [GO:0045542]; regulation of cholesterol biosynthetic process [GO:0045540]	hit with GO BP
GN013588	Chromosome_5A	15707	8	320	35.44916279365888	0.6496395809882607	64.57587876236582	319	0.6144200626959248	73.59375	13	0.6923076923076923	64.26159878022217	306	0.6111111111111112	0.9758602978941961	69	0	methylated (>=50%)	Q5ZKE7	UMP-CMP kinase (EC 2.7.4.14) (Deoxycytidylate kinase) (CK) (dCMP kinase) (Nucleoside-diphosphate kinase) (EC 2.7.4.6) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK)	'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; CDP biosynthetic process [GO:0046705]; UDP biosynthetic process [GO:0006225]	hit with GO BP
GN013589	Chromosome_5A	1094	2	51	42.96160877513711	1.027040957202025	0.9824561403508771	51	0	0.976709241172051	49	0	1.0638297872340425	2	0	0.7437457741717377	58	0	unmethylated (<10%)	Q84JE8	Polynucleotide 3'-phosphatase ZDP (EC 3.1.3.32) (DNA nick sensor protein)	base-excision repair [GO:0006284]; DNA repair [GO:0006281]; double-strand break repair via nonhomologous end joining [GO:0006303]; single strand break repair [GO:0000012]	hit with GO BP
GN013590	Chromosome_5A	15551	14	183	36.35136004115491	0.35632365101171304	93.17223198594024	181	0.994475138121547	93.26478149100257	53	1	93.15315315315316	128	0.9921875	94.60688758934373	51	1	methylated (>=50%)	Q15468	SCL-interrupting locus protein (TAL-1-interrupting locus protein)	centrosome duplication [GO:0051298]; determination of left/right symmetry [GO:0007368]; embryonic axis specification [GO:0000578]; floor plate development [GO:0033504]; forebrain development [GO:0030900]; heart looping [GO:0001947]; in utero embryonic development [GO:0001701]; microtubule organizing center organization [GO:0031023]; mitotic spindle organization [GO:0007052]; multicellular organism growth [GO:0035264]; negative regulation of apoptotic process [GO:0043066]; neural tube closure [GO:0001843]; neural tube development [GO:0021915]; notochord development [GO:0030903]; positive regulation of centriole replication [GO:0046601]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]; positive regulation of spindle assembly [GO:1905832]; protein localization to centrosome [GO:0071539]; regulation of centriole replication [GO:0046599]; regulation of mitotic spindle organization [GO:0060236]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN013591	Chromosome_5A	6823	3	118	35.57086325663198	0.5479239684494926	87.65957446808511	117	0.9230769230769231	95.75289575289575	48	1	84.18141592920354	69	0.8695652173913043	48.44459979028312	62	0.46774193548387094	methylated (>=50%)	Q90YL3	Mediator of RNA polymerase II transcription subunit 26 (Cofactor required for Sp1 transcriptional activation subunit 7) (CRSP complex subunit 7) (Mediator complex subunit 26)	positive regulation of gene expression [GO:0010628]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN013166	Chromosome_5A	17123	30	452	37.74455410850902	0.7411808757691111	1.3144008442866737	443	0	0.9568094429044085	248	0	1.7282417468695022	195	0	0.4791566842357451	35	0	unmethylated (<10%)	P18948	Vitellogenin-6	lipid transport [GO:0006869]; negative regulation of protein oxidation [GO:1904807]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; positive regulation of cholesterol import [GO:1904109]	hit with GO BP
GN013592	Chromosome_5A	41364	13	537	35.61067595010154	0.40950305826634525	77.67408069744049	534	0.9063670411985019	80.96885813148789	56	0.9464285714285714	77.47667703243003	478	0.9016736401673641	29.945945945945947	14	0.07142857142857142	methylated (>=50%)	O59697	Serine/threonine-protein kinase ppk25 (EC 2.7.11.1)	signal transduction [GO:0007165]	hit with GO BP
GN013593	Chromosome_5A	1020	1	52	47.84313725490196	0.9085303186022611	1.1811023622047243	41	0	1.1811023622047243	41	0	NA	NA	NA	0.6823997725334091	69	0	unmethylated (<10%)	Q8T3B9	Transcription factor sem-2 (Sex muscle abnormal protein 2)	brain development [GO:0007420]; mesodermal cell fate specification [GO:0007501]; myoblast fate specification [GO:0048626]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron differentiation [GO:0030182]; positive regulation of egg-laying behavior [GO:1901046]; positive regulation of embryonic development [GO:0040019]; positive regulation of mesodermal cell fate specification [GO:0048337]; positive regulation of post-embryonic development [GO:0048582]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of vulval development [GO:0040026]	hit with GO BP
GN013175	Chromosome_5A	1500	1	62	43	0.8965238012609174	0.5434782608695652	62	0	0.5434782608695652	62	0	NA	NA	NA	13.681512335789812	59	0.13559322033898305	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013162	Chromosome_5A	2204	4	17	34.75499092558984	0.2554874431481115	89.61424332344214	9	1	89.07103825136612	6	1	90.25974025974025	3	1	90.26280323450135	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013161	Chromosome_5A	31521	26	463	34.373909457187274	0.4978369631713388	85.38507187129105	441	0.9478458049886621	90.57591623036649	42	0.9523809523809523	84.92225932708536	399	0.9473684210526315	0.5577427821522309	48	0	methylated (>=50%)	Q8AY73	Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein) (Chromosome segregation 1-like protein) (Importin-alpha re-exporter)	protein export from nucleus [GO:0006611]; protein import into nucleus [GO:0006606]	hit with GO BP
GN013160	Chromosome_5A	2580	4	45	33.41085271317829	0.6555174127106012	0.6524575902566333	45	0	0.5671077504725898	23	0	0.7252215954875101	22	0	0.7083461656914074	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013159	Chromosome_5A	12621	10	326	37.05728547658664	0.7526638558554339	1.7600205549845838	324	0	0.7234726688102894	63	0	1.9571865443425076	261	0	0.4452690166975881	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013158	Chromosome_5A	18397	19	474	36.42985269337392	0.7765629189691836	0.9762433485565845	474	0	0.8596713021491783	80	0	0.9993973483326637	394	0	0.5649717514124294	52	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN013596	Chromosome_5A	561	1	28	44.20677361853832	1.0367632499504984	0.7717750826901875	28	0	0.7717750826901875	28	0	NA	NA	NA	0.41572184429327286	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013597	Chromosome_5A	810	1	30	40.49382716049383	0.9111019459337858	0.7930214115781126	30	0	0.7930214115781126	30	0	NA	NA	NA	0.43609527004360954	60	0	unmethylated (<10%)	Q9TT23	Melanocortin receptor 5 (MC5-R)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; negative regulation of immune response [GO:0050777]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of exocytosis [GO:0045921]; temperature homeostasis [GO:0001659]	hit with GO BP
GN013598	Chromosome_5A	879	1	42	42.207053469852106	1.0730728985001743	0.6615214994487321	42	0	0.6615214994487321	42	0	NA	NA	NA	0.4662004662004662	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013599	Chromosome_5A	1146	3	11	38.39441535776614	0.2633327066491195	60.62992125984252	8	0.75	68.2442748091603	7	0.8571428571428571	14.018691588785046	1	0	0.5242825607064018	62	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013184	Chromosome_5A	1786	4	26	33.09070548712206	0.5329018338727076	32.692732493925334	24	0.4166666666666667	57.044534412955464	14	0.6428571428571429	3.4516285853184248	10	0.1	0	1	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013600	Chromosome_5A	1053	2	18	38.74643874643875	0.45792563600782776	NA	0	NA	NA	NA	NA	NA	NA	NA	20.58823529411765	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013188	Chromosome_5A	17015	9	414	35.1219512195122	0.7902427007096603	8.71714696188625	407	0.002457002457002457	9.583074051026758	33	0	8.654064100820527	374	0.00267379679144385	2.178318135764944	27	0	unmethylated (<10%)	Q3B7D2	Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (LCB 2) (Serine-palmitoyl-CoA transferase 2) (SPT 2)	adipose tissue development [GO:0060612]; ceramide biosynthetic process [GO:0046513]; glycosphingolipid biosynthetic process [GO:0006688]; positive regulation of lipophagy [GO:1904504]; response to immobilization stress [GO:0035902]; sphinganine biosynthetic process [GO:0046511]; sphingolipid biosynthetic process [GO:0030148]; sphingomyelin biosynthetic process [GO:0006686]; sphingosine biosynthetic process [GO:0046512]	hit with GO BP
GN013189	Chromosome_5A	25299	51	460	37.86315664650777	0.5075602778912954	83.80366457135214	459	0.9651416122004357	84.35392320534224	326	0.9693251533742331	82.69849785407726	133	0.9548872180451128	83.12182741116752	29	0.9655172413793104	methylated (>=50%)	Q6V0I7	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebral cortex development [GO:0021987]; epithelial cell differentiation [GO:0030855]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; neurogenesis [GO:0022008]	hit with GO BP
GN013206	Chromosome_5A	864	1	33	42.592592592592595	0.8441746854182087	0.3787878787878788	33	0	0.3787878787878788	33	0	NA	NA	NA	0.6760909649661955	51	0	unmethylated (<10%)	P30098	Neuromedin-K receptor (NKR) (NK-3 receptor) (NK-3R) (Neurokinin B receptor) (Tachykinin receptor 3)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; G protein-coupled receptor signaling pathway [GO:0007186]; phospholipase C-activating tachykinin receptor signaling pathway [GO:0007209]; positive regulation of flagellated sperm motility [GO:1902093]	hit with GO BP
GN013205	Chromosome_5A	3770	2	126	37.87798408488064	0.9330216844751729	0.6697157791571382	126	0	0.7729468599033816	19	0	0.6487124041674858	107	0	0.7978723404255319	38	0	unmethylated (<10%)	Q96P65	Pyroglutamylated RF-amide peptide receptor (AQ27) (G protein-coupled receptor 103) (Orexigenic neuropeptide QRFP receptor) (SP9155)	cellular response to hormone stimulus [GO:0032870]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN013204	Chromosome_5A	3215	6	50	36.48522550544323	0.4697874777892079	85.54259455638035	50	0.96	93.2741116751269	13	1	82.55756981871632	37	0.9459459459459459	93.52997145575642	14	1	methylated (>=50%)	Q8TAT6	Nuclear protein localization protein 4 homolog (Protein NPL4)	ERAD pathway [GO:0036503]; Golgi organization [GO:0007030]; negative regulation of RIG-I signaling pathway [GO:0039536]; negative regulation of type I interferon production [GO:0032480]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; rescue of stalled cytosolic ribosome [GO:0072344]; retrograde protein transport, ER to cytosol [GO:0030970]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013203	Chromosome_5A	4124	9	45	33.38991270611057	0.3917454393467954	76.67752442996742	45	0.8666666666666667	86.2759113652609	22	1	68.64153201675643	23	0.7391304347826086	13.765822784810126	25	0.12	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013603	Chromosome_5A	4741	3	157	39.25332208394853	0.8597220104690756	0.7592035524996419	157	0	1.2718600953895072	39	0	0.6465140660492749	118	0	0.5821764442454097	66	0	unmethylated (<10%)	Q9WYJ1	L-threonine ammonia-lyase (EC 4.3.1.19) (L-serine ammonia-lyase) (EC 4.3.1.17) (Threonine dehydratase)	L-serine catabolic process [GO:0006565]; L-threonine catabolic process [GO:0006567]	hit with GO BP
GN013201	Chromosome_5A	207	1	6	40.09661835748792	0.7340425531914894	1.5873015873015872	6	0	1.5873015873015872	6	0	NA	NA	NA	0.527831094049904	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013200	Chromosome_5A	581	2	17	43.373493975903614	0.6476296636286145	0.4065040650406504	17	0	0.5102040816326531	12	0	0.28901734104046245	5	0	0.3333333333333333	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013604	Chromosome_5A	372	1	11	48.11827956989247	0.5641025641025641	0.29239766081871343	11	0	0.29239766081871343	11	0	NA	NA	NA	0.48951048951048953	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013199	Chromosome_5A	951	5	20	36.90851735015773	0.6212032137958063	0.639386189258312	20	0	0.28169014084507044	18	0	4.166666666666667	2	0	2.804247209365641	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013198	Chromosome_5A	661	2	16	35.703479576399396	0.7843951642809464	0.6283662477558348	16	0	0.7945516458569807	13	0	0	3	0	5.876575544278933	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013197	Chromosome_5A	3892	9	98	34.943473792394656	0.8248633755695839	0.5496392992098935	98	0	0.6376594148537135	52	0	0.4752851711026616	46	0	1.152073732718894	70	0	unmethylated (<10%)	Q8BMF5	Glutamate receptor ionotropic, kainate 4 (GluK4) (Glutamate receptor KA-1) (KA1)	modulation of chemical synaptic transmission [GO:0050804]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN013196	Chromosome_5A	267	1	6	41.19850187265918	0.5295867768595042	0.8583690987124464	6	0	0.8583690987124464	6	0	NA	NA	NA	5.441274054412741	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013606	Chromosome_5A	982	2	14	36.15071283095723	0.4381972333779563	88.13559322033899	14	1	90.22900763358778	13	1	75.89285714285714	1	1	93.5009671179884	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013194	Chromosome_5A	4680	4	38	35.662393162393165	0.2570558833477395	90.33613445378151	38	1	90.02557544757033	9	1	90.40548258138207	29	1	92.8082191780822	6	1	methylated (>=50%)	Q5ZID2	uS5 assembly chaperone PDCD2L (Programmed cell death protein 2-like)	apoptotic process [GO:0006915]	hit with GO BP
GN013193	Chromosome_5A	20634	10	362	33.633808277600075	0.620682864260347	72.94757665677547	362	0.7569060773480663	78.34448160535118	17	0.8235294117647058	72.69031486648068	345	0.7536231884057971	52.917647058823526	45	0.5111111111111111	methylated (>=50%)	Q28CJ6	Nuclear distribution protein nudE-like 1	lysosome localization [GO:0032418]; positive regulation of ruffle assembly [GO:1900029]	hit with GO BP
GN013192	Chromosome_5A	33556	13	455	36.26773155322446	0.41330295872032485	84.09641036205387	364	0.9285714285714286	86.77055702917772	64	0.984375	83.60465825254558	300	0.9166666666666666	0.8795074758135444	38	0	methylated (>=50%)	Q12857	Nuclear factor 1 A-type (NF1-A) (Nuclear factor 1/A) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/A) (NF-I/A) (NFI-A) (TGGCA-binding protein)	BMP signaling pathway [GO:0030509]; cartilage development [GO:0051216]; cell morphogenesis [GO:0000902]; limb morphogenesis [GO:0035108]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; viral genome replication [GO:0019079]	hit with GO BP
GN013191	Chromosome_5A	693	2	13	42.56854256854257	0.4395491803278688	89.81481481481481	10	1	96.55172413793103	9	1	76.05633802816901	1	1	88.88198757763975	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013608	Chromosome_5A	28851	32	347	34.97625732210322	0.39511467102381037	90.24653105213525	346	0.9739884393063584	90.20317283607014	61	0.9508196721311475	90.25487256371814	285	0.9789473684210527	0.8686210640608035	61	0	methylated (>=50%)	Q865S1	AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adaptor-related protein complex 3 subunit delta-1) (BLVPCP1) (Bovine leukemia virus cell receptor) (BLV-R) (Delta-adaptin)	anterograde axonal transport [GO:0008089]; anterograde synaptic vesicle transport [GO:0048490]; Golgi to vacuole transport [GO:0006896]; neurotransmitter receptor transport, postsynaptic endosome to lysosome [GO:0098943]; protein targeting to vacuole [GO:0006623]; synaptic vesicle budding from endosome [GO:0016182]; synaptic vesicle membrane organization [GO:0048499]	hit with GO BP
GN013213	Chromosome_5A	858	1	8	36.5967365967366	0.2930327868852459	94.46564885496183	7	1	94.46564885496183	7	1	NA	NA	NA	13.940473162045281	76	0.05263157894736842	methylated (>=50%)	P29540	General transcription factor IIE subunit 2 (Transcription initiation factor IIE subunit beta) (TFIIE-beta)	transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN013212	Chromosome_5A	1765	3	41	35.46742209631728	0.7408374283374284	0.8888888888888888	41	0	0.8185538881309686	34	0	1.073345259391771	7	0	1.6744186046511629	55	0	unmethylated (<10%)	Q6P3P5	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase (EC 2.4.1.206) (Lactotriaosylceramide synthase) (Lc(3)Cer synthase) (Lc3 synthase) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5) (BGnT-5) (Beta-1,3-Gn-T5) (Beta-1,3-N-acetylglucosaminyltransferase 5) (Beta3Gn-T5)	glycoprotein biosynthetic process [GO:0009101]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN013211	Chromosome_5A	727	2	18	38.101788170563964	0.6826291079812207	1.3513513513513513	18	0	1.3513513513513513	18	0	NA	NA	NA	0.7506527415143603	54	0	unmethylated (<10%)	Q99NB2	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase (EC 2.4.1.206) (Lactotriaosylceramide synthase) (Lc(3)Cer synthase) (Lc3 synthase) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5) (BGnT-5) (Beta-1,3-Gn-T5) (Beta-1,3-N-acetylglucosaminyltransferase 5) (Beta3Gn-T5)	central nervous system development [GO:0007417]; glycoprotein biosynthetic process [GO:0009101]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN013210	Chromosome_5A	1026	1	24	38.79142300194932	0.6218024797353602	1.3319672131147542	24	0	1.3319672131147542	24	0	NA	NA	NA	0.5605381165919282	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013209	Chromosome_5A	1165	2	36	39.141630901287556	0.8071748878923767	0.5607476635514018	36	0	0.6972111553784861	24	0	0.33277870216306155	12	0	6.833631484794275	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013610	Chromosome_5A	1550	3	61	46.96774193548387	0.7136549246341151	0.5050505050505051	61	0	0.8741258741258742	33	0	0.2964426877470356	28	0	2.5311812179016875	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013611	Chromosome_5A	17746	9	331	35.495322889665275	0.5939918494473602	1.3160987074030552	290	0	2.272727272727273	15	0	1.282830739299611	275	0	0.45235223160434257	48	0	unmethylated (<10%)	Q504A5	Probable thiopurine S-methyltransferase (Thiopurine methyltransferase) (EC 2.1.1.67)	NA	hit, no GO BP
GN013612	Chromosome_5A	1095	2	43	45.29680365296804	0.7655724111018974	0.6230529595015576	43	0	0.6651884700665188	42	0	0	1	0	1.2295081967213115	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013613	Chromosome_5A	9308	17	297	37.516115169746456	0.9068315565031982	1.1610708475077651	297	0	0.658300761160255	117	0	1.4432513566562752	180	0	1.1754462342185459	51	0	unmethylated (<10%)	A0A182C2Z2	Ovochymase (HrOVCH) (EC 3.4.21.-)	fertilization [GO:0009566]; oogenesis [GO:0048477]; proteolysis [GO:0006508]	hit with GO BP
GN013217	Chromosome_5A	201	1	7	46.766169154228855	0.638095238095238	0.8064516129032258	7	0	0.8064516129032258	7	0	NA	NA	NA	0.3855050115651503	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013216	Chromosome_5A	5802	8	56	35.72905894519131	0.30289402736293364	61.74038115785689	56	0.6071428571428571	60.19971469329529	17	0.47058823529411764	62.25961538461539	39	0.6666666666666666	0.5263157894736842	48	0	methylated (>=50%)	A1ZA47	PDZ and LIM domain protein Zasp (Z band alternatively spliced PDZ-motif protein)	actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]; myofibril assembly [GO:0030239]; regulation of cell-matrix adhesion [GO:0001952]	hit with GO BP
GN013215	Chromosome_5A	21652	14	199	34.43099944577868	0.31075258161861297	69.80692983968281	188	0.776595744680851	65.68807339449542	26	0.8846153846153846	70.23401826484019	162	0.7592592592592593	77.61069340016708	26	0.9230769230769231	methylated (>=50%)	Q62920	PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like PDZ and LIM domains protein)	actin cytoskeleton organization [GO:0030036]; cell growth involved in cardiac muscle cell development [GO:0061049]; heart development [GO:0007507]; muscle structure development [GO:0061061]; regulation of dendritic spine morphogenesis [GO:0061001]; regulation of postsynapse assembly [GO:0150052]; regulation of synapse assembly [GO:0051963]	hit with GO BP
GN013214	Chromosome_5A	3882	6	58	35.600206079340545	0.4732982004006584	85.3515625	58	0.8793103448275862	90.20408163265306	19	1	83.52534562211981	39	0.8205128205128205	90.51987767584097	22	1	methylated (>=50%)	Q55FI1	4-aminobutyrate aminotransferase (EC 2.6.1.19) (GABA aminotransferase) (GABA-AT) (Gamma-amino-N-butyrate transaminase) (GABA transaminase)	GABA catabolic process [GO:0009450]	hit with GO BP
GN013223	Chromosome_5A	357	1	13	44.817927170868344	0.72515625	94.25087108013938	13	1	94.25087108013938	13	1	NA	NA	NA	86.05341246290801	17	0.9411764705882353	methylated (>=50%)	Q17045	GTP-binding protein AGP-1	NA	hit, no GO BP
GN013224	Chromosome_5A	8400	10	129	34.964285714285715	0.5120276407981508	93.29963711767755	128	0.9921875	93.01075268817205	30	1	93.39139344262296	98	0.9897959183673469	6.622746185852982	43	0.06976744186046512	methylated (>=50%)	Q5XGS8	GTP-binding protein 1 (EC 3.6.5.3)	GTP metabolic process [GO:0046039]; positive regulation of mRNA catabolic process [GO:0061014]; RNA surveillance [GO:0071025]; translational elongation [GO:0006414]	hit with GO BP
GN013225	Chromosome_5A	5357	8	40	35.00093335822289	0.24380475594493117	91.5035799522673	40	0.975	86.15664845173042	9	0.8888888888888888	93.40232858990944	31	1	27.849927849927848	23	0.30434782608695654	methylated (>=50%)	Q5BK24	Uncharacterized protein C8orf76 homolog	NA	hit, no GO BP
GN013617	Chromosome_5A	9005	12	107	35.469183786785116	0.37966361488889283	89.30964625214274	107	0.9813084112149533	91.14906832298136	41	1	88.51727982162765	66	0.9696969696969697	93.51851851851852	62	0.9516129032258065	methylated (>=50%)	Q8K2L8	Trafficking protein particle complex subunit 12 (Tetratricopeptide repeat protein 15) (TPR repeat protein 15)	COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; metaphase chromosome alignment [GO:0051310]; positive regulation of protein localization to kinetochore [GO:1905342]; regulation of kinetochore assembly [GO:0090234]; vesicle tethering [GO:0099022]	hit with GO BP
GN013332	Chromosome_5A	1619	4	10	31.192093885114268	0.25446372438073683	NA	0	NA	NA	NA	NA	NA	NA	NA	86.24921334172436	55	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN013618	Chromosome_5A	22703	15	224	34.982160947892346	0.32460927149950647	90.13844844922268	222	0.990990990990991	89.88642509464576	34	1	90.18050541516246	188	0.9893617021276596	75.44731610337972	20	0.95	methylated (>=50%)	Q01538	Myelin transcription factor 1 (MyT1) (Myelin transcription factor I) (MyTI) (PLPB1) (Proteolipid protein-binding protein)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN013619	Chromosome_5A	7532	5	145	37.148167817312796	0.560934771443246	86.08873023967364	145	0.9724137931034482	90.23809523809524	36	0.9722222222222222	84.95781959766386	109	0.9724770642201835	82.14285714285714	15	1	methylated (>=50%)	Q9NV79	Protein-L-isoaspartate O-methyltransferase domain-containing protein 2	NA	hit, no GO BP
GN013620	Chromosome_5A	32327	21	384	34.33352924799703	0.4037683757759167	89.94097096735334	382	0.9842931937172775	91.38056975894814	54	0.9814814814814815	89.76314008572074	328	0.9847560975609756	46.8314439695224	55	0.5454545454545454	methylated (>=50%)	Q96JM7	Lethal(3)malignant brain tumor-like protein 3 (H-l(3)mbt-like protein 3) (L(3)mbt-like protein 3) (L3mbt-like 3) (MBT-1)	negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription initiation-coupled chromatin remodeling [GO:0160217]; positive regulation of ubiquitin-dependent protein catabolic process [GO:2000060]	hit with GO BP
GN013621	Chromosome_5A	891	1	41	42.5364758698092	1.0217318342003692	0.5376344086021505	41	0	0.5376344086021505	41	0	NA	NA	NA	0.8812999173781327	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013622	Chromosome_5A	18381	16	241	36.026331538001195	0.41059319488893703	84.78260869565217	222	0.9144144144144144	81.11601513240858	55	0.8363636363636363	85.79783519553072	167	0.9401197604790419	85.65640194489465	24	1	methylated (>=50%)	Q9P2K1	Coiled-coil and C2 domain-containing protein 2A	cilium assembly [GO:0060271]; non-motile cilium assembly [GO:1905515]; protein localization to ciliary transition zone [GO:1904491]; smoothened signaling pathway [GO:0007224]	hit with GO BP
GN013231	Chromosome_5A	402	1	20	41.791044776119406	1.1396172927002126	0.33707865168539325	20	0	0.33707865168539325	20	0	NA	NA	NA	0.5532053368044256	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013230	Chromosome_5A	876	1	38	39.726027397260275	1.1003933754256057	0.9478672985781991	38	0	0.9478672985781991	38	0	NA	NA	NA	0.5284926470588235	66	0	unmethylated (<10%)	O42222	Growth/differentiation factor 8 (GDF-8) (Myostatin) (Myostatin-1) (zfMSTN-1) (Myostatin-B)	cardiac muscle myoblast proliferation [GO:0110021]; immune response [GO:0006955]; muscle organ development [GO:0007517]; negative regulation of cardiac muscle myoblast proliferation [GO:0110023]; negative regulation of growth [GO:0045926]; negative regulation of growth rate [GO:0045967]; negative regulation of skeletal muscle tissue development [GO:0048642]; negative regulation of striated muscle tissue development [GO:0045843]; regulation of muscle hyperplasia [GO:0014738]; skeletal muscle tissue development [GO:0007519]; transforming growth factor beta receptor signaling pathway [GO:0007179]; ventricular trabecula myocardium morphogenesis [GO:0003222]	hit with GO BP
GN013623	Chromosome_5A	477	1	0	50.314465408805034	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN013624	Chromosome_5A	2130	1	74	40.23474178403756	0.858440624795765	0.5410889414947582	74	0	0.5410889414947582	74	0	NA	NA	NA	0.5102040816326531	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013625	Chromosome_5A	7119	6	132	33.4457086669476	0.6631747429752206	90.85954354490745	132	0.9772727272727273	92.55842558425584	29	1	90.47486422503829	103	0.970873786407767	90.35222052067381	12	1	methylated (>=50%)	Q8R3G1	Nuclear inhibitor of protein phosphatase 1 (NIPP-1) (Protein phosphatase 1 regulatory inhibitor subunit 8)	cell population proliferation [GO:0008283]	hit with GO BP
GN013626	Chromosome_5A	606	1	22	41.74917491749175	0.8413479742521772	0.2862595419847328	22	0	0.2862595419847328	22	0	NA	NA	NA	2.616279069767442	37	0	unmethylated (<10%)	Q5FW38	Nuclear factor interleukin-3-regulated protein	circadian rhythm [GO:0007623]; immune response [GO:0006955]; negative regulation of DNA-templated transcription [GO:0045892]; regulation of DNA-templated transcription [GO:0006355]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN013627	Chromosome_5A	207	1	10	42.99516908212561	1.1348684210526316	0	10	0	0	10	0	NA	NA	NA	1.2533875338753389	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013628	Chromosome_5A	2625	2	75	36.19047619047619	0.8725761772853186	0.5074854097944684	75	0	0.6944444444444444	26	0	0.4302617425600574	49	0	0.8037508372404555	55	0	unmethylated (<10%)	Q7RTU0	Transcription factor 24 (TCF-24)	developmental process [GO:0032502]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN013629	Chromosome_5A	1201	3	15	38.05162364696086	0.34662895405218197	1.5337423312883436	9	0	2.1186440677966103	7	0	0	2	0	5.205479452054795	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013237	Chromosome_5A	336	1	16	41.964285714285715	1.0829975825946818	0.6896551724137931	16	0	0.6896551724137931	16	0	NA	NA	NA	0.5878894767783657	64	0	unmethylated (<10%)	Q32PV5	Transcription factor 21 (TCF-21) (Capsulin) (Epicardin) (MyoRa2)	artery development [GO:0060840]; branching involved in ureteric bud morphogenesis [GO:0001658]; branchiomeric skeletal muscle development [GO:0014707]; bronchiole development [GO:0060435]; developmental process [GO:0032502]; diaphragm development [GO:0060539]; embryonic digestive tract morphogenesis [GO:0048557]; epithelial cell differentiation [GO:0030855]; gland development [GO:0048732]; glomerulus development [GO:0032835]; kidney development [GO:0001822]; lung alveolus development [GO:0048286]; lung morphogenesis [GO:0060425]; lung vasculature development [GO:0060426]; metanephric glomerular capillary formation [GO:0072277]; metanephric mesenchymal cell differentiation [GO:0072162]; morphogenesis of a branching structure [GO:0001763]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; reproductive structure development [GO:0048608]; respiratory system development [GO:0060541]; roof of mouth development [GO:0060021]; Sertoli cell differentiation [GO:0060008]; sex determination [GO:0007530]; skeletal muscle tissue development [GO:0007519]; spleen development [GO:0048536]; ureteric bud development [GO:0001657]; vasculature development [GO:0001944]	hit with GO BP
GN013238	Chromosome_5A	372	1	22	47.58064516129032	1.077976817702845	0.5089058524173028	12	0	0.5089058524173028	12	0	NA	NA	NA	0.44776119402985076	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013631	Chromosome_5A	12919	3	374	36.713367907732795	0.8598382010634739	1.704749371934442	371	0	1.402805611222445	33	0	1.7239185750636132	338	0	0.8778930566640064	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013239	Chromosome_5A	46705	25	771	34.57231559790172	0.5527125443906106	70.74281994955659	765	0.7686274509803922	84.50018719580682	51	0.9803921568627451	69.95246596261804	714	0.7535014005602241	1.045958795562599	56	0	methylated (>=50%)	B0V0U5	Unhealthy ribosome biogenesis protein 2 homolog	regulation of hematopoietic stem cell differentiation [GO:1902036]; regulation of signal transduction by p53 class mediator [GO:1901796]; ribosome biogenesis [GO:0042254]	hit with GO BP
GN013240	Chromosome_5A	13158	8	367	36.50250797993616	0.8395751379330848	0.6791738573734899	357	0	0.5759539236861051	80	0	0.7103508263264714	277	0	0.7493755203996669	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013632	Chromosome_5A	282	1	14	43.97163120567376	1.0270551508844954	0.2242152466367713	14	0	0.2242152466367713	14	0	NA	NA	NA	0.6436512580456407	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013633	Chromosome_5A	27446	14	808	35.73562632077534	0.9221636287667696	1.93687649495362	717	0	0.837404047452896	73	0	2.0371785077667433	644	0	0.6774557771923222	50	0	unmethylated (<10%)	P37091	Epithelial sodium channel subunit gamma (Gamma-ENaC) (pithelial Na(+) channel subunit gamma) (Amiloride-sensitive sodium channel subunit gamma) (Gamma-NaCH) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG)	cellular response to acidic pH [GO:0071468]; cellular response to aldosterone [GO:1904045]; cellular response to vasopressin [GO:1904117]; intracellular sodium ion homeostasis [GO:0006883]; multicellular organismal-level water homeostasis [GO:0050891]; regulation of blood pressure [GO:0008217]; response to hypoxia [GO:0001666]; sensory perception of salty taste [GO:0050914]; sensory perception of sour taste [GO:0050915]; sodium ion homeostasis [GO:0055078]; sodium ion import across plasma membrane [GO:0098719]; sodium ion transmembrane transport [GO:0035725]; sodium ion transport [GO:0006814]; wound healing, spreading of epidermal cells [GO:0035313]	hit with GO BP
GN013634	Chromosome_5A	1655	3	28	31.117824773413897	0.6989441930618401	0.1029336078229542	27	0	0	6	0	0.12492192379762648	21	0	0.5500171880371262	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013254	Chromosome_5A	210	1	10	46.666666666666664	0.8746355685131195	0.7334963325183375	10	0	0.7334963325183375	10	0	NA	NA	NA	0.548646671543526	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013253	Chromosome_5A	1137	3	28	37.37906772207564	0.7087897408495859	0.5138086062941555	28	0	0.45454545454545453	9	0	0.5371530886302597	19	0	0.7862759113652609	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013252	Chromosome_5A	4320	1	59	41.226851851851855	0.3214245179514988	79.68386796838679	59	0.9661016949152542	79.68386796838679	59	0.9661016949152542	NA	NA	NA	83.49056603773585	15	1	methylated (>=50%)	B0DOB4	Nephrocystin-4	negative regulation of canonical Wnt signaling pathway [GO:0090090]; protein localization to ciliary transition zone [GO:1904491]	hit with GO BP
GN013636	Chromosome_5A	354	1	18	41.52542372881356	1.3269471053727613	0.819672131147541	18	0	0.819672131147541	18	0	NA	NA	NA	54.25867507886435	32	0.8125	unmethylated (<10%)	Q9NX55	Huntingtin-interacting protein K (Huntingtin yeast partner K)	negative regulation of apoptotic process [GO:0043066]; protein stabilization [GO:0050821]	hit with GO BP
GN013637	Chromosome_5A	32260	16	428	35.306881587104776	0.4275805177988897	76.00529653634399	395	0.8759493670886076	82.33486943164363	26	0.8846153846153846	75.54309216676015	369	0.8753387533875339	28.201634877384198	12	0.4166666666666667	methylated (>=50%)	Q4R4T9	Ran-binding protein 3 (RanBP3)	protein export from nucleus [GO:0006611]	hit with GO BP
GN013638	Chromosome_5A	2742	6	30	34.13566739606127	0.37781084656084657	95.30295913574449	30	1	97.01863354037268	10	1	94.25981873111782	20	1	37.455516014234874	34	0.4117647058823529	methylated (>=50%)	Q80VC6	tRNA selenocysteine 1-associated protein 1 (SECp43) (tRNA selenocysteine-associated protein 1)	selenocysteine incorporation [GO:0001514]	hit with GO BP
GN013249	Chromosome_5A	17982	10	359	35.05727950172395	0.6503125924578287	76.31441214255126	297	0.7878787878787878	78.25136612021858	14	0.8571428571428571	76.22624614466223	283	0.784452296819788	49.166666666666664	24	0.5416666666666666	methylated (>=50%)	Q68FJ6	p21-activated protein kinase-interacting protein 1-like (PAK1-interacting protein 1-like)	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; ribosomal large subunit biogenesis [GO:0042273]	hit with GO BP
GN001338	Chromosome_5A	426	1	21	46.244131455399064	0.9454660748256183	NA	0	NA	NA	NA	NA	NA	NA	NA	75.1131221719457	39	0.6923076923076923	NA	NA	NA	NA	no Swiss-Prot hit
GN013248	Chromosome_5A	2590	4	21	37.95366795366795	0.22540406133443847	79.19540229885058	21	1	78.75816993464052	7	1	79.43262411347517	14	1	82.15053763440861	22	0.6818181818181818	methylated (>=50%)	Q2NKS3	Proteasome assembly chaperone 3	chaperone-mediated protein complex assembly [GO:0051131]; proteasome assembly [GO:0043248]	hit with GO BP
GN013247	Chromosome_5A	1616	2	22	40.0990099009901	0.3420040018470063	76.43742953776776	22	1	74.35897435897436	20	1	86.98630136986301	2	1	43.05283757338552	17	0.5294117647058824	methylated (>=50%)	Q9V6K3	Tyrosine-protein kinase transmembrane receptor Ror2 (dRor2) (EC 2.7.10.1) (Neurospecific receptor tyrosine kinase)	cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; muscle cell cellular homeostasis [GO:0046716]; photoreceptor cell axon guidance [GO:0072499]; rhabdomere development [GO:0042052]; signal transduction [GO:0007165]	hit with GO BP
GN013641	Chromosome_5A	408	1	19	40.68627450980392	1.1492957746478873	89.10891089108911	5	1	89.10891089108911	5	1	NA	NA	NA	73.80952380952381	29	0.8275862068965517	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013642	Chromosome_5A	5590	4	46	35.54561717352415	0.2616529907850607	47.06559263521289	46	0.4782608695652174	64.81012658227849	8	0.75	43.89692585895118	38	0.42105263157894735	87.02021681804864	50	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013244	Chromosome_5A	8594	6	89	37.456364905748195	0.2959996284844099	83.29074110477688	88	0.9772727272727273	89.337822671156	16	1	82.00667302192565	72	0.9722222222222222	93.73825923606762	39	1	methylated (>=50%)	Q5BLX8	WD repeat domain-containing protein 83 (Mitogen-activated protein kinase organizer 1) (MAPK organizer 1)	inflammatory response to wounding [GO:0090594]; mRNA splicing, via spliceosome [GO:0000398]; neural tube closure [GO:0001843]; placenta blood vessel development [GO:0060674]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; response to hypoxia [GO:0001666]; response to lipopolysaccharide [GO:0032496]; response to wounding [GO:0009611]; RNA splicing, via transesterification reactions [GO:0000375]	hit with GO BP
GN013643	Chromosome_5A	36879	33	425	34.62675235228721	0.3847157001766466	78.03341789869653	394	0.9238578680203046	85.24251805985553	110	0.9818181818181818	76.09479935616362	284	0.9014084507042254	6.093189964157706	29	0.034482758620689655	methylated (>=50%)	Q96LX7	Coiled-coil domain-containing protein 17	NA	hit, no GO BP
GN013644	Chromosome_5A	8324	12	76	35.60788082652571	0.2913917412045731	87.02762430939227	76	0.9736842105263158	87.63479511143062	24	0.9583333333333334	86.75813656668794	52	0.9807692307692307	23.75	41	0.24390243902439024	methylated (>=50%)	Q9NPF5	DNA methyltransferase 1-associated protein 1 (DNMAP1) (DNMT1-associated protein 1)	chromatin remodeling [GO:0006338]; DNA repair [GO:0006281]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of protein import into nucleus [GO:0042307]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair [GO:2000779]; response to ethanol [GO:0045471]	hit with GO BP
GN013645	Chromosome_5A	13635	12	197	36.61166116611661	0.4321863155923317	79.39938573541122	195	0.9076923076923077	67.97900262467192	30	0.7333333333333333	81.7944131003165	165	0.9393939393939394	27.805978567399887	31	0.25806451612903225	methylated (>=50%)	Q9LDD8	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial (MCCase subunit beta) (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta)	L-leucine catabolic process [GO:0006552]	hit with GO BP
GN013646	Chromosome_5A	5326	5	79	36.68794592564777	0.44082706018554896	45.54762643499845	75	0.38666666666666666	45.833333333333336	23	0.34782608695652173	45.45824847250509	52	0.40384615384615385	0.6090133982947625	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013647	Chromosome_5A	28061	12	381	33.92252592566195	0.472531640254669	81.437758787772	360	0.8833333333333333	82.45804006497022	30	0.9666666666666667	81.34739870534644	330	0.8757575757575757	17.3053152039555	12	0.25	methylated (>=50%)	Q9H3H1	tRNA dimethylallyltransferase (EC 2.5.1.75) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (hGRO1) (tRNA isopentenyltransferase 1) (IPTase)	mitochondrial tRNA modification [GO:0070900]; tRNA modification [GO:0006400]	hit with GO BP
GN013648	Chromosome_5A	1228	2	23	38.355048859934854	0.5112036199095022	16.123019571295433	23	0.043478260869565216	16.123019571295433	23	0.043478260869565216	NA	NA	NA	4.412238325281804	48	0.020833333333333332	sparse (10-50%)	Q17103	Myc protein (c-myc)	NA	hit, no GO BP
GN013649	Chromosome_5A	2344	5	35	38.907849829351534	0.39842456206807797	69.12698412698413	35	0.6	71.7910447761194	18	0.6111111111111112	66.10169491525424	17	0.5882352941176471	0.647715005397625	48	0	methylated (>=50%)	Q96T60	Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)]	base-excision repair [GO:0006284]; base-excision repair, gap-filling [GO:0006287]; DNA repair [GO:0006281]; DNA-templated DNA replication [GO:0006261]; double-strand break repair via nonhomologous end joining [GO:0006303]; nucleotide-excision repair [GO:0006289]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of telomere maintenance [GO:0032206]; regulation of DNA repair [GO:0006282]; response to oxidative stress [GO:0006979]; response to radiation [GO:0009314]; single strand break repair [GO:0000012]	hit with GO BP
GN013267	Chromosome_5A	2319	2	38	45.66623544631307	0.3817052463788204	86.44939965694682	25	1	83.10991957104558	13	1	88.02017654476671	12	1	87.34367183591796	28	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013266	Chromosome_5A	753	1	20	38.645418326693225	0.7123935666982024	96.27507163323783	9	1	96.27507163323783	9	1	NA	NA	NA	90.80882352941177	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013651	Chromosome_5A	3930	2	64	35.49618320610687	0.5170053484729513	76.85418415897006	64	0.796875	61.53071500503525	28	0.6071428571428571	82.75193798449612	36	0.9444444444444444	40.94724220623501	21	0.47619047619047616	methylated (>=50%)	Q6DHN0	Transmembrane protein 53	negative regulation of BMP signaling pathway [GO:0030514]; negative regulation of ossification [GO:0030279]; negative regulation of osteoblast differentiation [GO:0045668]; regulation of nucleocytoplasmic transport [GO:0046822]	hit with GO BP
GN013652	Chromosome_5A	7587	9	54	34.519572953736656	0.23935012356064989	56.05370960400546	53	0.660377358490566	55.95026642984014	6	0.5	56.068911511354735	47	0.6808510638297872	28.112215078901226	35	0.3142857142857143	methylated (>=50%)	A7MBF6	Armadillo-like helical domain containing protein 1	NA	hit, no GO BP
GN013653	Chromosome_5A	18044	38	508	36.81001995123032	0.8320910090690443	0.9398367290937779	506	0	0.8312958435207825	147	0	0.9687649333159564	359	0	0.5156115726152964	55	0	unmethylated (<10%)	Q05722	Collagen alpha-1(IX) chain	bone morphogenesis [GO:0060349]; cartilage development [GO:0051216]; chondrocyte proliferation [GO:0035988]; extracellular matrix organization [GO:0030198]; growth plate cartilage development [GO:0003417]; skeletal system development [GO:0001501]; tissue homeostasis [GO:0001894]	hit with GO BP
GN013263	Chromosome_5A	231	1	11	52.38095238095238	0.7251712328767124	0.5617977528089888	11	0	0.5617977528089888	11	0	NA	NA	NA	0.40613718411552346	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013654	Chromosome_5A	432	1	25	51.851851851851855	0.8643457382953181	0.6160164271047228	25	0	0.6160164271047228	25	0	NA	NA	NA	1.65860400829302	44	0	unmethylated (<10%)	Q9NUR3	Transmembrane protein 74B	NA	hit, no GO BP
GN013655	Chromosome_5A	27673	22	342	34.383695298666574	0.4213412735003603	92.58176017016751	341	1	95.68489713998997	58	1	92.02810975336824	283	1	88.41321544904606	27	1	methylated (>=50%)	B4II37	Serrate RNA effector molecule homolog (Arsenite-resistance protein 2 homolog)	defense response to Gram-negative bacterium [GO:0050829]; nuclear RNA surveillance [GO:0071027]; primary miRNA processing [GO:0031053]; regulatory ncRNA-mediated post-transcriptional gene silencing [GO:0035194]; siRNA processing [GO:0030422]	hit with GO BP
GN013656	Chromosome_5A	7590	11	109	34.1501976284585	0.4938789715645441	73.73243738546121	108	0.8611111111111112	90.81015719467956	13	1	71.8129926610492	95	0.8421052631578947	91.71020550330896	46	1	methylated (>=50%)	Q3ZCD7	Very-long-chain enoyl-CoA reductase (EC 1.3.1.93) (Synaptic glycoprotein SC2) (Trans-2,3-enoyl-CoA reductase) (TER)	fatty acid elongation [GO:0030497]; sphingolipid metabolic process [GO:0006665]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN013657	Chromosome_5A	1560	2	56	45.44871794871795	0.7030193780982424	0.91324200913242	37	0	1.079136690647482	29	0	0.625	8	0	0.28835063437139563	41	0	unmethylated (<10%)	P41340	Actin-3 (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN013658	Chromosome_5A	576	1	30	47.22222222222222	0.9367376809237274	0.6747638326585695	30	0	0.6747638326585695	30	0	NA	NA	NA	0.566150178784267	47	0	unmethylated (<10%)	Q9D5I4	Dynein light chain Tctex-type 5 (Tctex1 domain-containing protein 1)	microtubule-based movement [GO:0007018]	hit with GO BP
GN013659	Chromosome_5A	681	1	34	43.31864904552129	1.0696664510764113	0.5424954792043399	34	0	0.5424954792043399	34	0	NA	NA	NA	0.328515111695138	43	0	unmethylated (<10%)	A2VDD2	Dynein light chain Tctex-type 5-B (Tctex1 domain-containing protein 1-B)	microtubule-based movement [GO:0007018]	hit with GO BP
GN013660	Chromosome_5A	633	1	28	44.39178515007899	0.8997867803837953	0.9635237439779766	28	0	0.9635237439779766	28	0	NA	NA	NA	0.42847725774555045	44	0	unmethylated (<10%)	Q8N7M0	Dynein light chain Tctex-type 5 (Tctex1 domain-containing protein 1)	microtubule-based movement [GO:0007018]	hit with GO BP
GN013661	Chromosome_5A	636	1	30	42.61006289308176	1.0529801324503312	0.46865846514352666	30	0	0.46865846514352666	30	0	NA	NA	NA	0.6635700066357001	50	0	unmethylated (<10%)	Q66IC8	Dynein light chain Tctex-type 5 (Tctex1 domain-containing protein 1)	cilium assembly [GO:0060271]; microtubule-based movement [GO:0007018]	hit with GO BP
GN013662	Chromosome_5A	1799	2	70	42.4680377987771	0.8730406328210034	0.8495145631067961	62	0	0.7860262008733624	50	0	0.9940357852882704	12	0	0.5740181268882175	55	0	unmethylated (<10%)	Q13351	Krueppel-like factor 1 (Erythroid krueppel-like transcription factor) (EKLF)	cellular response to endothelin [GO:1990859]; erythrocyte differentiation [GO:0030218]; maternal process involved in female pregnancy [GO:0060135]; positive regulation of DNA-templated transcription [GO:0045893]; protein destabilization [GO:0031648]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013663	Chromosome_5A	1874	2	66	42.3692636072572	0.786553724053724	1.0789324247586598	49	0	1.6491754122938531	28	0	0.7312614259597806	21	0	0.618921308576481	29	0	unmethylated (<10%)	P79818	Actin, cytoplasmic 1 (EC 3.6.4.-) (Beta-actin) (OlCA1) [Cleaved into: Actin, cytoplasmic 1, N-terminally processed]	NA	hit, no GO BP
GN013664	Chromosome_5A	2967	1	88	39.298955173576005	0.7712867777383906	0.7879832553558237	88	0	0.7879832553558237	88	0	NA	NA	NA	1.25	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013665	Chromosome_5A	1298	3	37	43.6055469953775	0.6013472903936692	0.7332722273143905	37	0	0.7490636704119851	29	0	0.6896551724137931	8	0	1.3163867453472538	37	0	unmethylated (<10%)	O17320	Actin (EC 3.6.4.-)	NA	hit, no GO BP
GN013666	Chromosome_5A	1571	2	47	42.393380012730745	0.6667298749379205	1.9192587690271343	47	0	2.09471766848816	37	0	1.4527845036319613	10	0	0.8385744234800838	42	0	unmethylated (<10%)	P79818	Actin, cytoplasmic 1 (EC 3.6.4.-) (Beta-actin) (OlCA1) [Cleaved into: Actin, cytoplasmic 1, N-terminally processed]	NA	hit, no GO BP
GN013667	Chromosome_5A	685	2	19	38.394160583941606	0.7531828703703703	0.3480278422273782	19	0	0.2628120893561104	17	0	0.9900990099009901	2	0	0.748898678414097	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013668	Chromosome_5A	2897	2	109	40.559199171556784	0.9160965958212212	0.8946322067594433	100	0	1.1220196353436185	39	0	0.8456659619450317	61	0	0.5560704355885079	40	0	unmethylated (<10%)	P12716	Actin, cytoplasmic (EC 3.6.4.-) [Cleaved into: Actin, cytoplasmic, intermediate form]	NA	hit, no GO BP
GN013669	Chromosome_5A	1386	1	1	37.37373737373738	0.024725274725274724	0	1	0	0	1	0	NA	NA	NA	1.4019821126420111	71	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013279	Chromosome_5A	219	1	17	56.16438356164384	0.9875331564986738	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5974607916355489	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013278	Chromosome_5A	234	1	4	47.00854700854701	0.31314821010371363	0	4	0	0	4	0	NA	NA	NA	2.244488977955912	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013671	Chromosome_5A	990	1	36	47.57575757575758	0.6461906661348225	0.8875739644970414	36	0	0.8875739644970414	36	0	NA	NA	NA	0.4143309773336583	56	0	unmethylated (<10%)	Q25010	Actin, cytoplasmic A3a (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN013672	Chromosome_5A	918	1	10	37.58169934640523	0.30850920822691225	0	2	0	0	2	0	NA	NA	NA	3.736842105263158	32	0	NA	P50729	Probable ATP-dependent DNA helicase RecS (EC 5.6.2.4) (Probable DNA 3'-5' helicase RecS) (Recombination protein S)	DNA recombination [GO:0006310]	hit with GO BP
GN013673	Chromosome_5A	1966	2	71	42.11597151576806	0.8146392991998692	1.0262257696693273	50	0	1.663893510815308	25	0	0.6938421509106678	25	0	18.190342240975152	30	0.06666666666666667	unmethylated (<10%)	O17320	Actin (EC 3.6.4.-)	NA	hit, no GO BP
GN013674	Chromosome_5A	1701	2	64	44.091710758377424	0.7745901639344263	0.676923076923077	46	0	1.056338028169014	27	0	0.47303689687795647	19	0	0.8866995073891626	44	0	unmethylated (<10%)	Q25010	Actin, cytoplasmic A3a (EC 3.6.4.-)	anatomical structure formation involved in morphogenesis [GO:0048646]; cell development [GO:0048468]	hit with GO BP
GN013675	Chromosome_5A	2327	2	79	40.78212290502793	0.8230935238913962	0.2956081081081081	61	0	0.2881844380403458	32	0	0.2986857825567503	29	0	0.737291424136593	50	0	unmethylated (<10%)	O17320	Actin (EC 3.6.4.-)	NA	hit, no GO BP
GN013676	Chromosome_5A	2100	2	72	43	0.7421951698409581	1.094890510948905	55	0	2.4229074889867843	27	0	0.5882352941176471	28	0	0.5171299288946348	66	0	unmethylated (<10%)	P10984	Actin-2 (EC 3.6.4.-)	cortical actin cytoskeleton organization [GO:0030866]; embryo development ending in birth or egg hatching [GO:0009792]; locomotion [GO:0040011]; meiosis II cytokinesis [GO:0007111]; mitotic cytokinesis [GO:0000281]	hit with GO BP
GN013677	Chromosome_5A	3378	5	93	36.26406157489639	0.8414463640016071	2.544407105136822	93	0	2.4203821656050954	20	0	2.5732031943212066	73	0	0.21897810218978103	50	0	unmethylated (<10%)	Q3ZBN6	Growth arrest and DNA damage-inducible protein GADD45 alpha	cellular response to ionizing radiation [GO:0071479]; cellular response to mechanical stimulus [GO:0071260]; negative regulation of blood vessel endothelial cell migration [GO:0043537]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; positive regulation of JNK cascade [GO:0046330]; positive regulation of p38MAPK cascade [GO:1900745]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; regulation of cell cycle [GO:0051726]; signal transduction in response to DNA damage [GO:0042770]	hit with GO BP
GN013678	Chromosome_5A	676	3	32	44.23076923076923	0.9678747203579419	0.5698005698005698	30	0	0.9280742459396751	22	0	0	8	0	0.6177076183939602	73	0	unmethylated (<10%)	Q3ZBN6	Growth arrest and DNA damage-inducible protein GADD45 alpha	cellular response to ionizing radiation [GO:0071479]; cellular response to mechanical stimulus [GO:0071260]; negative regulation of blood vessel endothelial cell migration [GO:0043537]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of apoptotic process [GO:0043065]; positive regulation of JNK cascade [GO:0046330]; positive regulation of p38MAPK cascade [GO:1900745]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; regulation of cell cycle [GO:0051726]; signal transduction in response to DNA damage [GO:0042770]	hit with GO BP
GN013679	Chromosome_5A	1147	4	29	36.442894507410635	0.7615155677655677	0.7323026851098454	29	0	0.528169014084507	15	0	0.9077155824508321	14	0	0.8895131086142322	65	0	unmethylated (<10%)	Q2KIX1	Growth arrest and DNA damage-inducible protein GADD45 gamma	positive regulation of JNK cascade [GO:0046330]; positive regulation of p38MAPK cascade [GO:1900745]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN013680	Chromosome_5A	1563	1	62	43.186180422264876	0.8514268644127363	0.8430609597924773	62	0	0.8430609597924773	62	0	NA	NA	NA	0.73370738023306	38	0	unmethylated (<10%)	P15287	Adenosine deaminase AGSA (EC 3.5.4.4) (Atrial gland-specific antigen) (AGSA) (Mollusk-derived growth factor) (MDGF)	adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]	hit with GO BP
GN013681	Chromosome_5A	621	2	20	37.19806763285024	0.9504132231404959	92.63301500682128	20	1	95.2127659574468	12	1	88.02281368821293	8	1	95.81128747795414	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013293	Chromosome_5A	9130	14	184	36.99890470974808	0.5934399857002413	89.30282445477297	181	1	94.43938012762078	42	1	88.34704435586464	139	1	85.66912539515279	24	0.9583333333333334	methylated (>=50%)	Q8C753	Katanin-interacting protein	cerebrospinal fluid circulation [GO:0090660]	hit with GO BP
GN013294	Chromosome_5A	2088	3	13	35.82375478927203	0.19425757879369077	85.30559167750324	13	1	74.81481481481481	3	1	87.53943217665615	10	1	91.71868497711195	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013295	Chromosome_5A	258	1	8	43.41085271317829	0.6798418972332015	93.57142857142857	8	1	93.57142857142857	8	1	NA	NA	NA	80.26969481902059	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013296	Chromosome_5A	1605	1	41	42.679127725856695	0.5613994676494677	89.23611111111111	41	1	89.23611111111111	41	1	NA	NA	NA	64.79113384484228	19	0.8947368421052632	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013297	Chromosome_5A	5450	6	60	33.28440366972477	0.3980891719745223	80.3425559947299	59	0.9322033898305084	85.72635135135135	23	0.9130434782608695	77.9011872845653	36	0.9444444444444444	87.15953307392996	25	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013298	Chromosome_5A	9638	7	123	33.51317700767794	0.45720903916888334	86.38182674199624	123	0.983739837398374	90.40852575488455	18	1	85.76662143826323	105	0.9809523809523809	33.277731442869054	29	0.3448275862068966	methylated (>=50%)	Q7Z6J9	tRNA-splicing endonuclease subunit Sen54 (SEN54 homolog) (HsSEN54) (tRNA-intron endonuclease Sen54)	tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]; tRNA-type intron splice site recognition and cleavage [GO:0000379]	hit with GO BP
GN013299	Chromosome_5A	5086	5	25	33.248132127408574	0.1946815123760178	88.71725990597717	25	1	89.67661691542288	13	1	87.5912408759124	12	1	78.03138373751783	16	0.8125	methylated (>=50%)	Q5RBL0	Protein YIPF1 (YIP1 family member 1)	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN013683	Chromosome_5A	357	1	7	40.61624649859944	0.49	0.5780346820809249	7	0	0.5780346820809249	7	0	NA	NA	NA	0.5369127516778524	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013684	Chromosome_5A	4483	4	128	38.367164844969885	0.7765670082444203	0.6707946336429309	127	0	0.3966505068312032	45	0	0.846262341325811	82	0	0.45676004872107184	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013302	Chromosome_5A	180	1	4	41.111111111111114	0.5294117647058824	0	4	0	0	4	0	NA	NA	NA	0.3633720930232558	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013303	Chromosome_5A	1335	1	58	44.26966292134831	0.8888761336241534	1.5235457063711912	54	0	1.5235457063711912	54	0	NA	NA	NA	1.2779552715654952	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013686	Chromosome_5A	7841	4	206	35.86277260553501	0.817593139540122	1.0132201100067548	206	0	0.973070830504639	111	0	1.0430686406460297	95	0	0.5974264705882353	36	0	unmethylated (<10%)	P08953	Protein toll	antifungal innate immune response [GO:0061760]; cell competition in a multicellular organism [GO:0035212]; defense response to Gram-positive bacterium [GO:0050830]; defense response to oomycetes [GO:0002229]; detection of virus [GO:0009597]; dorsal/ventral axis specification [GO:0009950]; heart development [GO:0007507]; innate immune response [GO:0045087]; larval somatic muscle development [GO:0007526]; negative regulation of cell growth [GO:0030308]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of antifungal peptide production [GO:0002804]; positive regulation of antimicrobial peptide production [GO:0002225]; positive regulation of hemocyte proliferation [GO:0035208]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of embryonic pattern specification [GO:1902875]; response to tumor cell [GO:0002347]; response to wounding [GO:0009611]; signal transduction [GO:0007165]; synapse assembly [GO:0007416]; synaptic target inhibition [GO:0016201]; Toll signaling pathway [GO:0008063]	hit with GO BP
GN013687	Chromosome_5A	13912	16	147	35.86112708453134	0.3296273312949194	91.6291421313936	142	1	90.999099909991	38	1	91.84656002484859	104	1	93.2567726737338	47	0.9787234042553191	methylated (>=50%)	Q9NVE7	4'-phosphopantetheine phosphatase (EC 3.1.3.-) (Inactive pantothenic acid kinase 4) (hPanK4)	coenzyme A biosynthetic process [GO:0015937]; pantothenate metabolic process [GO:0015939]	hit with GO BP
GN013688	Chromosome_5A	318	1	8	45.911949685534594	0.47774647887323946	2.31023102310231	8	0	2.31023102310231	8	0	NA	NA	NA	0.7108330963889679	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013689	Chromosome_5A	312	1	5	45.19230769230769	0.3157894736842105	0	5	0	0	5	0	NA	NA	NA	0.7649308620182407	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013690	Chromosome_5A	207	1	8	42.028985507246375	0.9189789123196448	1.9801980198019802	8	0	1.9801980198019802	8	0	NA	NA	NA	0.6376195536663124	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013691	Chromosome_5A	249	1	11	43.373493975903614	0.9405906593406593	0.425531914893617	11	0	0.425531914893617	11	0	NA	NA	NA	0.6138735420503376	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013310	Chromosome_5A	207	1	4	46.85990338164251	0.35844155844155845	0	3	0	0	3	0	NA	NA	NA	1.4747191011235956	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013311	Chromosome_5A	612	1	23	41.33986928104575	0.8836158192090395	0.6640106241699867	23	0	0.6640106241699867	23	0	NA	NA	NA	0.5449591280653951	33	0	unmethylated (<10%)	Q80ZJ1	Ras-related protein Rap-2a (EC 3.6.5.2)	actin cytoskeleton organization [GO:0030036]; establishment of protein localization [GO:0045184]; intracellular protein localization [GO:0008104]; negative regulation of cell migration [GO:0030336]; positive regulation of cell migration [GO:0030335]; positive regulation of microvillus assembly [GO:1903698]; positive regulation of protein autophosphorylation [GO:0031954]; Rap protein signal transduction [GO:0032486]; regulation of dendrite morphogenesis [GO:0048814]; regulation of JNK cascade [GO:0046328]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; regulation of synapse assembly [GO:0051963]	hit with GO BP
GN013693	Chromosome_5A	786	1	12	41.98473282442748	0.35016335016335015	83.91472868217055	12	1	83.91472868217055	12	1	NA	NA	NA	78.2051282051282	24	0.9583333333333334	methylated (>=50%)	Q9TZM3	Leucine-rich repeat serine/threonine-protein kinase 1 (EC 2.7.11.1) (Leucine-rich repeats, ras-like domain, kinase protein 1) (PARK8-related kinase)	axon extension involved in axon guidance [GO:0048846]; intracellular protein localization [GO:0008104]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; response to endoplasmic reticulum stress [GO:0034976]; response to oxidative stress [GO:0006979]; synaptic vesicle transport [GO:0048489]	hit with GO BP
GN013694	Chromosome_5A	5549	4	55	35.0333393404217	0.3242260993537681	80.79561042524006	55	0.9454545454545454	84.21052631578948	4	1	80.62751871042026	51	0.9411764705882353	80.26874115983027	22	0.9090909090909091	methylated (>=50%)	Q3UHC2	Leucine-rich repeat serine/threonine-protein kinase 1 (EC 2.7.11.1)	bone resorption [GO:0045453]; negative regulation of peptidyl-tyrosine phosphorylation [GO:0050732]; osteoclast development [GO:0036035]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of intracellular signal transduction [GO:1902533]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]	hit with GO BP
GN013695	Chromosome_5A	1740	1	26	41.14942528735632	0.35420401963624404	88.46153846153847	26	1	88.46153846153847	26	1	NA	NA	NA	86.67518092805449	35	0.9714285714285714	methylated (>=50%)	Q9TZM3	Leucine-rich repeat serine/threonine-protein kinase 1 (EC 2.7.11.1) (Leucine-rich repeats, ras-like domain, kinase protein 1) (PARK8-related kinase)	axon extension involved in axon guidance [GO:0048846]; intracellular protein localization [GO:0008104]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; response to endoplasmic reticulum stress [GO:0034976]; response to oxidative stress [GO:0006979]; synaptic vesicle transport [GO:0048489]	hit with GO BP
GN013696	Chromosome_5A	6382	6	69	36.994672516452525	0.3162450860277294	83.35095137420718	68	0.9705882352941176	83.63384188626907	17	0.9411764705882353	83.28436173685928	51	0.9803921568627451	44.12017167381974	23	0.391304347826087	methylated (>=50%)	Q02338	D-beta-hydroxybutyrate dehydrogenase, mitochondrial (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (BDH) (Short chain dehydrogenase/reductase family 9C member 1)	ketone biosynthetic process [GO:0042181]; ketone catabolic process [GO:0042182]	hit with GO BP
GN013697	Chromosome_5A	2088	1	17	42.72030651340996	0.19446453224640062	56.09756097560975	5	0.8	56.09756097560975	5	0.8	NA	NA	NA	92.03655352480418	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013698	Chromosome_5A	17203	18	234	35.69144916584317	0.4289339257743823	91.35541771149532	233	0.9699570815450643	95.51163269507927	73	1	89.3949694085656	160	0.95625	88.38763575605681	19	1	methylated (>=50%)	U3JAG9	Centrosomal protein of 131 kDa (5-azacytidine-induced protein 1)	cilium assembly [GO:0060271]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; intraciliary retrograde transport [GO:0035721]; intraciliary transport involved in cilium assembly [GO:0035735]; Kupffer's vesicle development [GO:0070121]; melanosome transport [GO:0032402]; negative regulation of intracellular protein transport [GO:0090317]; regulation of centrosome duplication [GO:0010824]; sensory perception of light stimulus [GO:0050953]	hit with GO BP
GN013314	Chromosome_5A	30522	19	490	35.479326387523756	0.5112030168941478	92.19015280135824	472	0.9830508474576272	92.90591805766313	43	0.9767441860465116	92.11820781696854	429	0.9836829836829837	53.56790529431108	40	0.575	methylated (>=50%)	Q8K0V4	CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3)	determination of left/right symmetry [GO:0007368]; gene expression [GO:0010467]; mRNA catabolic process [GO:0006402]; negative regulation of intracellular estrogen receptor signaling pathway [GO:0033147]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of cold-induced thermogenesis [GO:0120162]; regulation of DNA-templated transcription [GO:0006355]; regulation of stem cell population maintenance [GO:2000036]; trophectodermal cell differentiation [GO:0001829]	hit with GO BP
GN013315	Chromosome_5A	20371	17	240	34.7601983211428	0.3903412683711988	83.52371492426124	240	0.9458333333333333	86.83718028696195	27	0.9629629629629629	83.15753188555671	213	0.9436619718309859	62	11	0.9090909090909091	methylated (>=50%)	Q8HY87	Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11) (ElaC homolog protein 2) (Ribonuclease Z 2) (RNase Z 2) (tRNA 3 endonuclease 2) (tRNase Z 2)	mitochondrial tRNA 3'-end processing [GO:1990180]	hit with GO BP
GN013316	Chromosome_5A	7868	5	167	38.357905439755974	0.5773823752741999	83.3612640651185	159	0.9371069182389937	15.719063545150501	7	0.42857142857142855	85.87212911235258	152	0.9605263157894737	0.5299768135144087	53	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013317	Chromosome_5A	438	1	2	38.81278538812786	0.12514285714285714	0	2	0	0	2	0	NA	NA	NA	3.072311727238666	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013701	Chromosome_5A	3224	5	117	37.56203473945409	1.0378881679956415	6.472291149710505	105	0.009523809523809525	3.3997252747252746	72	0	11.122661122661123	33	0.030303030303030304	0.5141388174807198	30	0	unmethylated (<10%)	Q9QXV1	Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3) (mPc3)	cellular response to hydrogen peroxide [GO:0070301]; heterochromatin formation [GO:0031507]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of collagen biosynthetic process [GO:0032967]; positive regulation of DNA repair [GO:0045739]	hit with GO BP
GN013702	Chromosome_5A	1336	3	48	38.547904191616766	0.968203641634206	0.18968133535660092	48	0	0.061957868649318466	33	0	0.3913894324853229	15	0	0.5160550458715596	65	0	unmethylated (<10%)	Q01177	Plasminogen [Cleaved into: Plasmin (EC 3.4.21.7); Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	blood coagulation [GO:0007596]; collagen catabolic process [GO:0030574]; extracellular matrix disassembly [GO:0022617]; fibrinolysis [GO:0042730]; labyrinthine layer blood vessel development [GO:0060716]; mononuclear cell migration [GO:0071674]; muscle cell cellular homeostasis [GO:0046716]; myoblast differentiation [GO:0045445]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of fibrinolysis [GO:0051918]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of fibrinolysis [GO:0051919]; protein catabolic process [GO:0030163]; protein processing [GO:0016485]; proteolysis [GO:0006508]; tissue regeneration [GO:0042246]; trans-synaptic signaling by BDNF, modulating synaptic transmission [GO:0099183]; trophoblast giant cell differentiation [GO:0060707]	hit with GO BP
GN013703	Chromosome_5A	1783	4	46	41.11048794167134	0.6185369532428356	0.5671902268760908	46	0	0.40160642570281124	30	0	0.6944444444444444	16	0	0.4324843825084094	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013704	Chromosome_5A	6645	5	190	37.92325056433408	0.7955456250189034	17.610220440881765	184	0.15760869565217392	44.23717521652232	40	0.475	11.445318525374056	144	0.06944444444444445	0.18860807242549982	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013705	Chromosome_5A	13566	6	252	36.45142267433289	0.5598701367612406	83.09158284806776	252	0.9603174603174603	84.9079754601227	14	1	83.00968188105118	238	0.957983193277311	0.3811944091486658	21	0	methylated (>=50%)	Q91YU8	Suppressor of SWI4 1 homolog (Ssf-1) (Peter Pan homolog)	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; regulation of cell growth by extracellular stimulus [GO:0001560]	hit with GO BP
GN013321	Chromosome_5A	914	2	0	45.51422319474836	0	NA	0	NA	NA	NA	NA	NA	NA	NA	59.75400457665904	42	0.5476190476190477	NA	NA	NA	NA	no Swiss-Prot hit
GN013706	Chromosome_5A	32643	24	802	35.64929693961952	0.7733602955134344	1.1416348830017524	801	0	0.7012622720897616	123	0	1.2175226586102719	678	0	0.6009615384615384	55	0	unmethylated (<10%)	O88278	Cadherin EGF LAG seven-pass G-type receptor 3 (Multiple epidermal growth factor-like domains protein 2) (Multiple EGF-like domains protein 2)	axonal fasciculation [GO:0007413]; axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; cilium assembly [GO:0060271]; dopaminergic neuron axon guidance [GO:0036514]; homophilic cell-cell adhesion [GO:0007156]; neuron migration [GO:0001764]; regulation of protein localization [GO:0032880]; regulation of protein phosphorylation [GO:0001932]; serotonergic neuron axon guidance [GO:0036515]; Wnt signaling pathway, planar cell polarity pathway [GO:0060071]	hit with GO BP
GN013707	Chromosome_5A	1614	3	67	40.33457249070632	1.0210560108773652	0.6423982869379015	67	0	0.5719313682358117	58	0	0.945179584120983	9	0	0.62402496099844	53	0	unmethylated (<10%)	B8A5Y1	Zinc finger protein 488 (EC 2.1.1.-)	regulation of DNA-templated transcription [GO:0006355]; spinal cord motor neuron cell fate specification [GO:0021520]	hit with GO BP
GN013708	Chromosome_5A	675	2	14	41.925925925925924	0.4751131221719457	0.7751937984496124	14	0	0.821917808219178	13	0	0	1	0	1.056142301278488	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013324	Chromosome_5A	775	3	16	42.064516129032256	0.4688445251058681	0.5319148936170213	16	0	0.5780346820809249	14	0	0	2	0	0.460617227084293	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013325	Chromosome_5A	291	1	7	43.29896907216495	0.5325490196078432	0	7	0	0	7	0	NA	NA	NA	0.659444182760245	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013710	Chromosome_5A	675	2	13	41.77777777777778	0.44516030844155846	0.7246376811594203	13	0	0.8547008547008547	11	0	0	2	0	0.9285425918449738	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013711	Chromosome_5A	12357	10	275	34.87092336327588	0.7321033854267655	7.100483150877622	269	0.01486988847583643	0.35870864886408926	54	0	8.322496749024708	215	0.018604651162790697	0.34831069313827934	62	0	unmethylated (<10%)	Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN013712	Chromosome_5A	4352	5	85	33.96139705882353	0.6773788923375541	0.5362462760675273	85	0	0.43103448275862066	19	0	0.5600194789383979	66	0	0.819252432155658	45	0	unmethylated (<10%)	P30437	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN013713	Chromosome_5A	9492	6	202	34.14454277286136	0.7308864025176796	1.2455374851249503	198	0	0.6802721088435374	24	0	1.3037011112083297	174	0	0.49983338887037654	58	0	unmethylated (<10%)	Q3UMF9	Failed axon connections homolog	NA	hit, no GO BP
GN013714	Chromosome_5A	432	1	16	43.51851851851852	0.7931153184165233	0.18382352941176472	16	0	0.18382352941176472	16	0	NA	NA	NA	0.6871035940803383	40	0	unmethylated (<10%)	C3ZQF9	QRFP-like peptide receptor	cellular response to hormone stimulus [GO:0032870]; cellular response to peptide [GO:1901653]; G protein-coupled receptor signaling pathway [GO:0007186]	hit with GO BP
GN013715	Chromosome_5A	189	1	11	40.74074074074074	1.4047297297297296	0.9421265141318977	11	0	0.9421265141318977	11	0	NA	NA	NA	0.20551967116852612	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013716	Chromosome_5A	927	1	41	41.53182308522114	1.0262177340965548	0.40338846308995563	41	0	0.40338846308995563	41	0	NA	NA	NA	2.779774742391565	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013339	Chromosome_5A	17193	13	275	34.35700575815739	0.5420399915531149	70.62092504266398	275	0.8072727272727273	89.00414937759336	38	1	68.45374944968938	237	0.7763713080168776	48.27018121911038	30	0.4666666666666667	methylated (>=50%)	O08653	Telomerase protein component 1 (rTLP1) (Telomerase-associated protein 1) (Telomerase protein 1) (p230) (p240) (p80 telomerase homolog)	RNA-templated DNA biosynthetic process [GO:0006278]; telomere maintenance via recombination [GO:0000722]	hit with GO BP
GN013340	Chromosome_5A	3596	3	38	35.90100111234705	0.332142318929351	82.58093935248517	38	0.9473684210526315	87.71610555050046	20	0.95	77.42230347349178	18	0.9444444444444444	86.40350877192982	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013341	Chromosome_5A	594	1	5	36.53198653198653	0.25384615384615383	94.28571428571429	5	1	94.28571428571429	5	1	NA	NA	NA	66.38176638176638	22	0.6363636363636364	methylated (>=50%)	Q501S4	Citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial (CS-KMT) (EC 2.1.1.-) (Methyltransferase-like protein 12, mitochondrial)	peptidyl-lysine dimethylation [GO:0018027]; peptidyl-lysine monomethylation [GO:0018026]; peptidyl-lysine trimethylation [GO:0018023]	hit with GO BP
GN013718	Chromosome_5A	3638	3	58	37.49312809235844	0.4650994654763873	73.17608337904552	58	0.8793103448275862	76.32850241545894	33	0.8787878787878788	71.09695038689121	25	0.88	50.847457627118644	15	0.6	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013719	Chromosome_5A	372	1	7	36.55913978494624	0.5782811459027315	63.0550621669627	7	0.7142857142857143	63.0550621669627	7	0.7142857142857143	NA	NA	NA	34.82642777155655	11	0.2727272727272727	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013720	Chromosome_5A	3740	2	24	37.80748663101604	0.21158633174926453	42.131979695431475	24	0.4583333333333333	38.9531345100426	22	0.4090909090909091	82.3076923076923	2	1	77.99636803874093	41	0.926829268292683	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013721	Chromosome_5A	657	1	12	43.074581430745816	0.39638009049773754	88.36104513064133	12	0.9166666666666666	88.36104513064133	12	0.9166666666666666	NA	NA	NA	77.89779808890735	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013722	Chromosome_5A	198	1	5	44.44444444444444	0.6141439205955335	92.89940828402366	5	1	92.89940828402366	5	1	NA	NA	NA	80.27397260273973	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013723	Chromosome_5A	366	1	17	42.622950819672134	1.0233552631578948	0.746268656716418	17	0	0.746268656716418	17	0	NA	NA	NA	2.8618152085036797	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013724	Chromosome_5A	1236	1	44	41.58576051779935	0.8243997089497939	0.24077046548956663	44	0	0.24077046548956663	44	0	NA	NA	NA	0.7203389830508474	47	0	unmethylated (<10%)	A2A259	Polycystin-2-like protein 1 (Polycystin-2L1) (Polycystic kidney disease 2-like 1 protein) (Polycystin-2 homolog)	cellular response to acidic pH [GO:0071468]; cellular response to pH [GO:0071467]; detection of chemical stimulus involved in sensory perception of sour taste [GO:0001581]; detection of chemical stimulus involved in sensory perception of taste [GO:0050912]; detection of mechanical stimulus [GO:0050982]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; potassium ion transmembrane transport [GO:0071805]; protein homotetramerization [GO:0051289]; protein tetramerization [GO:0051262]; response to water [GO:0009415]; sensory perception of sour taste [GO:0050915]; smoothened signaling pathway [GO:0007224]; sodium ion transmembrane transport [GO:0035725]; transmembrane transport [GO:0055085]	hit with GO BP
GN013725	Chromosome_5A	9200	11	303	38.33695652173913	0.8966775068273712	2.366338830141241	303	0	0.940096195889812	116	0	3.095317912615935	187	0	3.0215827338129495	50	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN013726	Chromosome_5A	11064	11	398	37.56326825741142	1.0210693853927832	0.615749632809852	393	0	0.6604623236265386	149	0	0.5887681159420289	244	0	0.9017132551848512	49	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN013727	Chromosome_5A	5642	3	102	33.55193193902871	0.6424920677097172	0.692167577413479	102	0	0.2070393374741201	11	0	0.7389654483722788	91	0	0.4830917874396135	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013728	Chromosome_5A	538	2	14	32.52788104089219	0.9955062120010574	0.5753739930955121	14	0	0.7331378299120235	12	0	0	2	0	1.115678214914856	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013729	Chromosome_5A	9454	7	325	38.05796488258938	0.9495558407009632	0.8547008547008547	315	0	0.54312047399605	153	0	1.1382357346113523	162	0	0.43462513582035495	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013730	Chromosome_5A	510	1	27	44.31372549019608	1.081441922563418	0.45787545787545786	27	0	0.45787545787545786	27	0	NA	NA	NA	0.655241935483871	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013731	Chromosome_5A	1785	1	19	37.47899159663866	0.30908245844269466	93.05799648506151	19	1	93.05799648506151	19	1	NA	NA	NA	62.7039627039627	26	0.7307692307692307	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013732	Chromosome_5A	360	1	1	38.611111111111114	0.09230769230769231	NA	0	NA	NA	NA	NA	NA	NA	NA	68.97001303780965	33	0.8787878787878788	NA	NA	NA	NA	no Swiss-Prot hit
GN013733	Chromosome_5A	216	1	3	40.27777777777778	0.4	NA	0	NA	NA	NA	NA	NA	NA	NA	32.90816326530612	21	0.19047619047619047	NA	NA	NA	NA	no Swiss-Prot hit
GN013348	Chromosome_5A	351	1	5	39.03133903133903	0.4398496240601504	25	1	0	25	1	0	NA	NA	NA	65.44502617801047	28	0.8571428571428571	NA	NA	NA	NA	no Swiss-Prot hit
GN013349	Chromosome_5A	360	1	2	39.166666666666664	0.18099547511312217	6.25	2	0	6.25	2	0	NA	NA	NA	37.46312684365782	17	0.23529411764705882	NA	NA	NA	NA	no Swiss-Prot hit
GN013735	Chromosome_5A	480	1	3	40.416666666666664	0.19501625135427952	0	1	0	0	1	0	NA	NA	NA	32.90816326530612	21	0.19047619047619047	NA	NA	NA	NA	no Swiss-Prot hit
GN013736	Chromosome_5A	597	1	2	36.348408710217754	0.1373676944316613	0	2	0	0	2	0	NA	NA	NA	3.1746031746031744	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013737	Chromosome_5A	942	1	5	37.15498938428875	0.20745243128964058	1.3157894736842106	5	0	1.3157894736842106	5	0	NA	NA	NA	1.2987012987012987	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013738	Chromosome_5A	312	1	2	37.17948717948718	0.23681214421252372	3.7037037037037037	2	0	3.7037037037037037	2	0	NA	NA	NA	1.5625	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013739	Chromosome_5A	390	1	0	38.46153846153846	0	NA	0	NA	NA	NA	NA	NA	NA	NA	75.26315789473684	13	0.6923076923076923	NA	NA	NA	NA	no Swiss-Prot hit
GN013740	Chromosome_5A	417	1	14	48.92086330935252	0.5616161616161616	94.62738301559791	14	1	94.62738301559791	14	1	NA	NA	NA	86.42911296436695	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013741	Chromosome_5A	1839	1	76	42.84937466014138	0.900616675365849	0.6493506493506493	76	0	0.6493506493506493	76	0	NA	NA	NA	0.6022187004754358	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013742	Chromosome_5A	5856	9	176	36.0655737704918	0.9244820141239112	0.5472255663784612	176	0	0.4665629860031104	56	0	0.5788271134805788	120	0	0.9213759213759214	54	0	unmethylated (<10%)	Q9VAF5	Cadherin-99C	apical protein localization [GO:0045176]; axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; calcium-mediated signaling [GO:0019722]; cell-cell adhesion mediated by cadherin [GO:0044331]; chorion-containing eggshell formation [GO:0007304]; epithelial cell differentiation [GO:0030855]; follicle cell microvillus organization [GO:0032529]; homophilic cell-cell adhesion [GO:0007156]; mucosal immune response [GO:0002385]; positive regulation of clathrin-dependent endocytosis [GO:2000370]; regulation of follicle cell microvillus length [GO:0032533]; sensory perception of sound [GO:0007605]; tube morphogenesis [GO:0035239]; vitelline membrane formation involved in chorion-containing eggshell formation [GO:0007305]	hit with GO BP
GN013743	Chromosome_5A	8412	9	291	36.92344270090347	1.0262665392161796	0.40258501959953386	222	0	0.4263565891472868	56	0	0.3936433882490159	166	0	1.5873015873015872	8	0	unmethylated (<10%)	Q9VEU1	Cadherin-89D	axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN013357	Chromosome_5A	5514	9	156	35.7816467174465	0.8856901036035758	0.5699417668194772	156	0	0.5162622612287042	51	0	0.58689272905119	105	0	1.7496229260935143	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013358	Chromosome_5A	1812	1	92	41.445916114790286	1.1896381931064013	0.5210142410559222	92	0	0.5210142410559222	92	0	NA	NA	NA	0.5468215994531784	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013359	Chromosome_5A	3623	3	7	31.90725917747723	0.07887354605958823	76.40918580375782	7	1	69.3069306930693	3	1	88.63636363636364	4	1	90	27	1	methylated (>=50%)	Q0MQH6	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit)	mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	hit with GO BP
GN013360	Chromosome_5A	237	1	9	39.24050632911393	1.1492456896551724	0	7	0	0	7	0	NA	NA	NA	0.9731543624161074	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013745	Chromosome_5A	228	1	9	39.473684210526315	1.2063492063492063	0	2	0	0	2	0	NA	NA	NA	0.8600095556617295	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013746	Chromosome_5A	651	1	16	38.556067588325654	0.7614035087719299	13.323572474377745	16	0	13.323572474377745	16	0	NA	NA	NA	16.14730878186969	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013361	Chromosome_5A	609	1	15	37.602627257799675	0.8081210191082803	25	15	0	25	15	0	NA	NA	NA	10.16042780748663	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013747	Chromosome_5A	575	2	9	39.82608695652174	0.39473684210526316	98.34437086092716	9	1	99.27536231884058	6	1	97.5609756097561	3	1	94.72434713795832	53	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013363	Chromosome_5A	4610	3	82	35.11930585683297	0.5770857186474315	85.78422801189019	82	0.8536585365853658	86.42117376294591	14	0.7857142857142857	85.6701030927835	68	0.8676470588235294	18.67981374965763	55	0.16363636363636364	methylated (>=50%)	O43759	Synaptogyrin-1	regulated exocytosis [GO:0045055]; regulation of long-term neuronal synaptic plasticity [GO:0048169]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; synaptic vesicle membrane organization [GO:0048499]	hit with GO BP
GN013364	Chromosome_5A	11849	6	222	36.40813570765465	0.5674015230344728	86.89455173690381	222	0.9234234234234234	85.72198275862068	65	0.8923076923076924	87.24289715886354	157	0.9363057324840764	32.291666666666664	62	0.3387096774193548	methylated (>=50%)	Q6PFK1	E3 ubiquitin-protein ligase ZNF598 (EC 2.3.2.27) (Zinc finger protein 598)	protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; protein ubiquitination [GO:0016567]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN013749	Chromosome_5A	37420	17	1097	36.023516835916624	0.9040658687403448	1.4080100125156445	1010	0	0.44429254955570746	124	0	1.517145289883118	886	0	0.486815415821501	53	0	unmethylated (<10%)	Q13507	Short transient receptor potential channel 3 (TrpC3) (Transient receptor protein 3) (TRP-3) (hTrp-3) (hTrp3)	calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; phototransduction [GO:0007602]; positive regulation of calcium ion transport into cytosol [GO:0010524]; positive regulation of cardiac muscle hypertrophy in response to stress [GO:1903244]; regulation of cytosolic calcium ion concentration [GO:0051480]; response to ATP [GO:0033198]; response to calcium ion [GO:0051592]; single fertilization [GO:0007338]	hit with GO BP
GN013750	Chromosome_5A	6245	4	179	36.925540432345876	0.8431493525839695	0.4857063558145989	179	0	0.6791171477079796	96	0	0.35203003989673787	83	0	0.3836667580158948	56	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN013366	Chromosome_5A	18056	9	237	33.62871067789101	0.4664760838557101	51.66111828249202	233	0.5450643776824035	67.54143646408839	37	0.8648648648648649	48.91209053957121	196	0.4846938775510204	9.932659932659933	23	0.043478260869565216	methylated (>=50%)	Q9XZV3	Guanine nucleotide-binding protein G(o) subunit alpha	adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cytoskeleton organization [GO:0007010]	hit with GO BP
GN013367	Chromosome_5A	8181	6	159	34.54345434543454	0.6515153184703167	80.89887640449439	144	0.8541666666666666	51.66858457997699	16	0.4375	83.86456509048453	128	0.90625	0.8717762440973483	50	0	methylated (>=50%)	O00142	Thymidine kinase 2, mitochondrial (EC 2.7.1.21) (2'-deoxyuridine kinase TK2) (EC 2.7.1.74) (Deoxycytidine kinase TK2) (EC 2.7.1.-) (Mt-TK)	deoxycytidine metabolic process [GO:0046092]; nucleobase-containing compound metabolic process [GO:0006139]; pyrimidine nucleoside salvage [GO:0043097]; thymidine metabolic process [GO:0046104]	hit with GO BP
GN013752	Chromosome_5A	17455	14	192	35.04439988541965	0.35874155292394877	79.98402272323806	189	0.9629629629629629	81.69642857142857	63	0.9523809523809523	79.32349323493234	126	0.9682539682539683	63.760896637608965	26	0.7307692307692307	methylated (>=50%)	Q5XNR9	Leukemia inhibitory factor receptor (LIF receptor) (LIF-R) (CD antigen CD118)	cytokine-mediated signaling pathway [GO:0019221]	hit with GO BP
GN013753	Chromosome_5A	2455	2	51	37.515274949083505	0.5915942165942166	75.99684168969601	51	0.7254901960784313	90	15	0.9333333333333333	70.64920894708129	36	0.6388888888888888	0.3672612801678909	46	0	methylated (>=50%)	Q9BSF4	Mitochondrial import inner membrane translocase subunit Tim29 (TIM29)	protein insertion into mitochondrial inner membrane [GO:0045039]	hit with GO BP
GN013754	Chromosome_5A	2979	3	80	38.637126552534404	0.7242932427257642	1.2603750384260684	80	0	0	16	0	1.527570789865872	64	0	0.667334000667334	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013755	Chromosome_5A	25204	17	302	34.169179495318204	0.4131050934975201	73.32669983416253	269	0.7695167286245354	79.421768707483	47	0.851063829787234	71.85002060156572	222	0.7522522522522522	80.30225409836065	52	0.75	methylated (>=50%)	Q9ESV0	ATP-dependent RNA helicase DDX24 (EC 3.6.4.13) (DEAD box protein 24)	NA	hit, no GO BP
GN013756	Chromosome_5A	3892	11	100	36.356628982528264	0.7777062859928944	0.8513931888544891	97	0	0.9744623655913979	63	0	0.6843065693430657	34	0	1.8162393162393162	39	0	unmethylated (<10%)	Q5W7F3	A disintegrin and metalloproteinase with thrombospondin motifs like (ADAMTS-like) (EC 3.4.24.-) (BmADAMTS-like)	instar larval development [GO:0002168]; membrane protein ectodomain proteolysis [GO:0006509]; metamorphosis [GO:0007552]; molting cycle process [GO:0022404]; pupation [GO:0035074]	hit with GO BP
GN013757	Chromosome_5A	318	1	5	40.56603773584906	0.38498789346246975	NA	0	NA	NA	NA	NA	NA	NA	NA	51.03448275862069	6	0.5	NA	NA	NA	NA	no Swiss-Prot hit
GN013758	Chromosome_5A	543	1	19	39.226519337016576	0.9411603721948549	8.604407135362015	19	0	8.604407135362015	19	0	NA	NA	NA	0.7293566032821047	49	0	unmethylated (<10%)	Q562C4	Thiol S-methyltransferase TMT1B (EC 2.1.1.9) (Associated with lipid droplet protein 1) (ALDI) (Methyltransferase-like protein 7B) (Thiol S-methyltransferase METTL7B)	NA	hit, no GO BP
GN013759	Chromosome_5A	955	2	39	41.15183246073298	0.9650963930348259	0.34947578632051923	39	0	0.3372681281618887	36	0	0.44642857142857145	3	0	13.578274760383387	51	0.11764705882352941	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013760	Chromosome_5A	35010	28	231	32.450728363324764	0.2509900178885991	74.18676282773646	228	0.8333333333333334	79.16221414832229	89	0.9101123595505618	71.48980537534754	139	0.7841726618705036	67.91907514450867	16	0.8125	methylated (>=50%)	P41233	Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 1) (ATP-binding cassette transporter 1) (ABC-1) (ATP-binding cassette 1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cellular response to cholesterol [GO:0071397]; cellular response to cytokine stimulus [GO:0071345]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to retinoic acid [GO:0071300]; cellular response to xenobiotic stimulus [GO:0071466]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; cholesterol transport [GO:0030301]; endosomal transport [GO:0016197]; export across plasma membrane [GO:0140115]; G protein-coupled receptor signaling pathway [GO:0007186]; high-density lipoprotein particle assembly [GO:0034380]; intracellular cholesterol transport [GO:0032367]; lipoprotein biosynthetic process [GO:0042158]; lipoprotein metabolic process [GO:0042157]; lysosome organization [GO:0007040]; peptide secretion [GO:0002790]; phagocytosis, engulfment [GO:0006911]; phospholipid efflux [GO:0033700]; phospholipid homeostasis [GO:0055091]; phospholipid translocation [GO:0045332]; phospholipid transport [GO:0015914]; platelet dense granule organization [GO:0060155]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of high-density lipoprotein particle assembly [GO:0090108]; protein lipidation [GO:0006497]; protein secretion [GO:0009306]; protein transmembrane transport [GO:0071806]; regulation of Cdc42 protein signal transduction [GO:0032489]; response to laminar fluid shear stress [GO:0034616]; response to vitamin B3 [GO:0033552]; reverse cholesterol transport [GO:0043691]; signal release [GO:0023061]	hit with GO BP
GN013761	Chromosome_5A	17448	19	247	34.875057313159104	0.4756269727403156	73.46217476312228	224	0.8214285714285714	82.12526389866291	82	0.9634146341463414	69.37465412285556	142	0.7394366197183099	67.50741839762611	15	0.8	methylated (>=50%)	P41233	Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 1) (ATP-binding cassette transporter 1) (ABC-1) (ATP-binding cassette 1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cellular response to cholesterol [GO:0071397]; cellular response to cytokine stimulus [GO:0071345]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to retinoic acid [GO:0071300]; cellular response to xenobiotic stimulus [GO:0071466]; cholesterol efflux [GO:0033344]; cholesterol homeostasis [GO:0042632]; cholesterol metabolic process [GO:0008203]; cholesterol transport [GO:0030301]; endosomal transport [GO:0016197]; export across plasma membrane [GO:0140115]; G protein-coupled receptor signaling pathway [GO:0007186]; high-density lipoprotein particle assembly [GO:0034380]; intracellular cholesterol transport [GO:0032367]; lipoprotein biosynthetic process [GO:0042158]; lipoprotein metabolic process [GO:0042157]; lysosome organization [GO:0007040]; peptide secretion [GO:0002790]; phagocytosis, engulfment [GO:0006911]; phospholipid efflux [GO:0033700]; phospholipid homeostasis [GO:0055091]; phospholipid translocation [GO:0045332]; phospholipid transport [GO:0015914]; platelet dense granule organization [GO:0060155]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of high-density lipoprotein particle assembly [GO:0090108]; protein lipidation [GO:0006497]; protein secretion [GO:0009306]; protein transmembrane transport [GO:0071806]; regulation of Cdc42 protein signal transduction [GO:0032489]; response to laminar fluid shear stress [GO:0034616]; response to vitamin B3 [GO:0033552]; reverse cholesterol transport [GO:0043691]; signal release [GO:0023061]	hit with GO BP
GN013762	Chromosome_5A	4658	5	40	32.88965221124946	0.33221892356932076	64.80633069554352	40	0.675	72.5925925925926	16	0.6875	59.752747252747255	24	0.6666666666666666	58.385463211200474	55	0.6181818181818182	methylated (>=50%)	Q6DIY8	Mpv17-like protein 2	NA	hit, no GO BP
GN013763	Chromosome_5A	9533	9	119	32.780866463862374	0.46792535481294983	80.09496919917865	117	0.8205128205128205	74.29718875502007	21	0.7619047619047619	81.1974950358943	96	0.8333333333333334	18.062678062678064	49	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013376	Chromosome_5A	10293	3	142	34.65461964441854	0.4695937978917201	83.97001934235976	142	0.9436619718309859	88.83312421580928	16	1	83.63620704504349	126	0.9365079365079365	71.42857142857143	13	0.8461538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013377	Chromosome_5A	14049	11	223	36.17339312406577	0.5032555756169964	84.82998309224122	197	0.8984771573604061	94.41016333938293	54	0.9629629629629629	81.48523634520339	143	0.8741258741258742	86.6991643454039	19	0.8947368421052632	methylated (>=50%)	Q9Y450	HBS1-like protein (EC 3.6.5.-) (ERFS)	nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; signal transduction [GO:0007165]; translation [GO:0006412]	hit with GO BP
GN013378	Chromosome_5A	6669	6	108	35.92742540110961	0.5020314705421088	82.0262312633833	108	0.8981481481481481	94.37465865647188	35	1	78.01808190037228	73	0.8493150684931506	32.421510724277276	48	0.2916666666666667	methylated (>=50%)	Q9Y450	HBS1-like protein (EC 3.6.5.-) (ERFS)	nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; signal transduction [GO:0007165]; translation [GO:0006412]	hit with GO BP
GN013379	Chromosome_5A	2903	3	49	36.51395108508439	0.5081357009920018	88.45191276367537	49	0.8979591836734694	88.9908256880734	8	0.875	88.38056680161944	41	0.9024390243902439	25.264012997562958	54	0.2222222222222222	methylated (>=50%)	A7RWC9	Inosine triphosphate pyrophosphatase (ITPase) (Inosine triphosphatase) (EC 3.6.1.66) (Non-canonical purine NTP pyrophosphatase) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase) (XTP/dITP diphosphatase)	deoxyribonucleoside triphosphate catabolic process [GO:0009204]; purine nucleoside triphosphate catabolic process [GO:0009146]	hit with GO BP
GN013766	Chromosome_5A	12094	9	286	38.928394245080206	0.6355065114501572	17.151927437641724	238	0.15546218487394958	44.73197781885398	27	0.4444444444444444	14.150658754902947	211	0.11848341232227488	0.588550026752274	51	0	sparse (10-50%)	P08132	Annexin A4 (35-beta calcimedin) (Annexin IV) (Annexin-4) (Chromobindin-4) (Endonexin I) (Lipocortin IV) (P32.5) (PP4-X) (Placental anticoagulant protein II) (PAP-II) (Protein II)	NA	hit, no GO BP
GN013767	Chromosome_5A	471	1	23	45.859872611464965	0.9307500644385256	0.8486562942008486	23	0	0.8486562942008486	23	0	NA	NA	NA	0.30873726458783574	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013768	Chromosome_5A	2699	2	6	42.97888106706188	0.07595720430208397	49.397590361445786	6	0.6666666666666666	49.397590361445786	6	0.6666666666666666	NA	NA	NA	61.44578313253012	13	0.7692307692307693	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013769	Chromosome_5A	15708	6	229	37.929717341482046	0.40736048585213186	91.00986296587239	224	0.9419642857142857	95.46991210277214	106	0.9811320754716981	88.19088319088318	118	0.9067796610169492	83.3005249343832	36	0.9722222222222222	methylated (>=50%)	Q14686	Nuclear receptor coactivator 6 (Activating signal cointegrator 2) (ASC-2) (Amplified in breast cancer protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Nuclear receptor coactivator RAP250) (NRC RAP250) (Nuclear receptor-activating protein, 250 kDa) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-interacting protein) (PRIP) (Thyroid hormone receptor-binding protein)	brain development [GO:0007420]; DNA damage response [GO:0006974]; DNA-templated transcription initiation [GO:0006352]; heart development [GO:0007507]; myeloid cell differentiation [GO:0030099]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; response to hormone [GO:0009725]	hit with GO BP
GN013770	Chromosome_5A	8837	9	111	32.62419373090415	0.472062874533908	78.52571991139553	108	0.8703703703703703	80.82191780821918	27	0.9259259259259259	77.99180949491885	81	0.8518518518518519	77.66129032258064	30	0.8666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013384	Chromosome_5A	1348	2	18	43.47181008902077	0.2826654240447344	95.58823529411765	18	1	95.34246575342466	12	1	95.87301587301587	6	1	34.129901960784316	39	0.28205128205128205	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013385	Chromosome_5A	6413	7	70	36.73787618899111	0.32548106901002016	84.62187236435199	68	0.9411764705882353	95.58620689655173	18	1	81.81497175141243	50	0.92	89.38315539739027	24	0.9166666666666666	methylated (>=50%)	Q4KMA2	Lysine-specific demethylase RAD23B (EC 1.14.11.-) (UV excision repair protein RAD23 homolog B)	cellular response to interleukin-7 [GO:0098761]; DNA damage response [GO:0006974]; embryonic organ development [GO:0048568]; nucleotide-excision repair [GO:0006289]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032434]; spermatogenesis [GO:0007283]	hit with GO BP
GN013386	Chromosome_5A	15486	7	125	35.82590727108356	0.25550910362139856	66.39271434917815	110	0.6363636363636364	68.53932584269663	13	0.6923076923076923	66.1038306451613	97	0.6288659793814433	41.597993550698675	39	0.41025641025641024	methylated (>=50%)	Q7T3H9	Putative hydroxypyruvate isomerase (EC 5.3.1.22)	glyoxylate metabolic process [GO:0046487]	hit with GO BP
GN013771	Chromosome_5A	5119	3	11	42.43016214104317	0.07624779959377116	30	1	0	NA	NA	NA	30	1	0	8.695652173913043	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013772	Chromosome_5A	3562	3	16	31.3307130825379	0.18403335023233436	51.76470588235294	12	0.6666666666666666	26.666666666666668	1	0	53.333333333333336	11	0.7272727272727273	8.695652173913043	2	0	methylated (>=50%)	Q5XUX1	F-box/WD repeat-containing protein 9 (F-box and WD-40 domain-containing protein 9)	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN013773	Chromosome_5A	4456	3	5	43.96319569120287	0.04205836825612565	NA	0	NA	NA	NA	NA	NA	NA	NA	73.84615384615384	19	0.7894736842105263	NA	NA	NA	NA	no Swiss-Prot hit
GN013774	Chromosome_5A	741	1	20	42.51012145748988	0.6040596722915138	0.39215686274509803	17	0	0.39215686274509803	17	0	NA	NA	NA	1.643835616438356	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013775	Chromosome_5A	759	1	25	51.11989459815547	0.5090543259557344	87.1548619447779	25	0.96	87.1548619447779	25	0.96	NA	NA	NA	72.14137214137214	26	0.8846153846153846	methylated (>=50%)	P60324	Nanos homolog 3 (NOS-3)	germ cell development [GO:0007281]; mRNA destabilization [GO:0061157]; negative regulation of apoptotic signaling pathway [GO:2001234]; negative regulation of translation [GO:0017148]; oogenesis [GO:0048477]; regulation of cell cycle [GO:0051726]; regulation of translation [GO:0006417]; spermatogenesis [GO:0007283]	hit with GO BP
GN013776	Chromosome_5A	18958	9	296	35.246334001476946	0.502834080653197	65.85245361730156	296	0.7331081081081081	75.51020408163265	29	0.8620689655172413	65.09618230245634	267	0.7191011235955056	81.8924438393465	24	0.9166666666666666	methylated (>=50%)	P80108	Phosphatidylinositol-glycan-specific phospholipase D (PI-G PLD) (EC 3.1.4.50) (Glycoprotein phospholipase D) (Glycosyl-phosphatidylinositol-specific phospholipase D) (GPI-PLD) (GPI-specific phospholipase D)	C-terminal protein lipidation [GO:0006501]; cell migration involved in sprouting angiogenesis [GO:0002042]; cellular response to cholesterol [GO:0071397]; cellular response to insulin stimulus [GO:0032869]; cellular response to pH [GO:0071467]; cellular response to triglyceride [GO:0071401]; cellular response to xenobiotic stimulus [GO:0071466]; chondrocyte differentiation [GO:0002062]; complement receptor mediated signaling pathway [GO:0002430]; hematopoietic stem cell migration [GO:0035701]; hematopoietic stem cell migration to bone marrow [GO:0097241]; insulin receptor signaling pathway [GO:0008286]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of triglyceride catabolic process [GO:0010897]; ossification [GO:0001503]; positive regulation of apoptotic process [GO:0043065]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of glucose metabolic process [GO:0010907]; positive regulation of high-density lipoprotein particle clearance [GO:0010983]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of triglyceride biosynthetic process [GO:0010867]; protein secretion [GO:0009306]; regulation of cellular response to insulin stimulus [GO:1900076]; response to glucose [GO:0009749]; transepithelial transport [GO:0070633]	hit with GO BP
GN013777	Chromosome_5A	588	1	22	44.21768707482993	0.8369565217391305	0.7205764611689351	22	0	0.7205764611689351	22	0	NA	NA	NA	1.7517366354575656	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013434	Chromosome_5A	5695	5	72	36.17208077260755	0.3865544950959504	3.079794680354643	72	0	2.5700934579439254	23	0	3.2978014656895405	49	0	7.026386006522384	47	0	unmethylated (<10%)	Q15392	Delta(24)-sterol reductase (EC 1.3.1.72) (24-dehydrocholesterol reductase) (3-beta-hydroxysterol Delta-24-reductase) (Diminuto/dwarf1 homolog) (Seladin-1)	cholesterol biosynthetic process [GO:0006695]; cholesterol biosynthetic process via desmosterol [GO:0033489]; cholesterol biosynthetic process via lathosterol [GO:0033490]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]; skin development [GO:0043588]; tissue development [GO:0009888]	hit with GO BP
GN013778	Chromosome_5A	5361	9	122	37.79145681775788	0.6528453345018581	3.913347309573725	75	0	0.6525285481239804	21	0	4.802134281903068	54	0	6.61596958174905	27	0	unmethylated (<10%)	B6CHA3	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Nuclear zinc finger protein Np95) (XNp95) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013779	Chromosome_5A	406	2	7	39.16256157635468	0.4674342105263158	0.6060606060606061	5	0	0.6451612903225806	4	0	0	1	0	NA	NA	NA	unmethylated (<10%)	A7E320	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; response to stress [GO:0006950]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013780	Chromosome_5A	192	1	7	51.041666666666664	0.5793103448275863	1.4492753623188406	7	0	1.4492753623188406	7	0	NA	NA	NA	0.9523809523809523	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013440	Chromosome_5A	2811	2	44	34.756314478833154	0.5230430921469954	0.7802340702210663	13	0	0.315955766192733	8	0	2.9411764705882355	5	0	0.48617441507140685	36	0	unmethylated (<10%)	E7EZF3	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	animal organ regeneration [GO:0031100]; chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; inflammatory response [GO:0006954]; intestinal epithelial structure maintenance [GO:0060729]; lens development in camera-type eye [GO:0002088]; liver development [GO:0001889]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013439	Chromosome_5A	2141	4	66	38.066324147594585	0.8612228479485117	4.415372035977105	35	0	20	7	0	3.102836879432624	28	0	5.475504322766571	11	0	unmethylated (<10%)	B6CHA3	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Nuclear zinc finger protein Np95) (XNp95) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013438	Chromosome_5A	2050	5	32	39.46341463414634	0.42960052390307796	1.9538188277087034	16	0	5.555555555555555	4	0	1.4256619144602851	12	0	4.9	33	0	unmethylated (<10%)	F6UA42	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase UHRF1) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013437	Chromosome_5A	406	2	7	39.40886699507389	0.4602429149797571	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	A7E320	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; response to stress [GO:0006950]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013436	Chromosome_5A	172	1	7	51.74418604651163	0.6310272536687631	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3861003861003861	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013781	Chromosome_5A	2779	3	45	35.228499460237494	0.5230150896680942	0.3058103975535168	12	0	0	1	0	0.3184713375796178	11	0	6.62557781201849	29	0	unmethylated (<10%)	B6CHA3	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Nuclear zinc finger protein Np95) (XNp95) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013782	Chromosome_5A	5377	9	125	37.86498047238237	0.6673978212322123	9.685751183814034	70	0	10.318949343339588	21	0	9.497206703910615	49	0	2.2222222222222223	4	0	unmethylated (<10%)	B6CHA3	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Nuclear zinc finger protein Np95) (XNp95) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013441	Chromosome_5A	9792	5	213	33.302696078431374	0.7850140577893703	90.72374567236358	210	0.9619047619047619	96.75486769845232	22	1	89.97776954427566	188	0.9574468085106383	0.4132231404958678	7	0	methylated (>=50%)	Q9W6Z2	TATA box-binding protein-like 1 (TBP-like 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor) (xlTLF)	DNA-templated transcription initiation [GO:0006352]; embryo development ending in birth or egg hatching [GO:0009792]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN013783	Chromosome_5A	3116	2	73	35.46213093709884	0.7476007677543186	94.93457154917687	73	0.9863013698630136	97.35376044568245	14	1	94.50248756218906	59	0.9830508474576272	91.99731002017485	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013784	Chromosome_5A	8162	7	119	36.37588826268072	0.440860771444393	81.10855129421331	119	0.9663865546218487	79.21279212792128	31	0.967741935483871	81.64435946462716	88	0.9659090909090909	84.86897717666949	27	1	methylated (>=50%)	Q15392	Delta(24)-sterol reductase (EC 1.3.1.72) (24-dehydrocholesterol reductase) (3-beta-hydroxysterol Delta-24-reductase) (Diminuto/dwarf1 homolog) (Seladin-1)	cholesterol biosynthetic process [GO:0006695]; cholesterol biosynthetic process via desmosterol [GO:0033489]; cholesterol biosynthetic process via lathosterol [GO:0033490]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]; skin development [GO:0043588]; tissue development [GO:0009888]	hit with GO BP
GN013785	Chromosome_5A	9976	4	177	32.548115477145146	0.6699239305700465	89.13570790246393	155	0.9935483870967742	93.6378466557912	21	1	88.30028757378538	134	0.9925373134328358	78.2442748091603	23	0.8695652173913043	methylated (>=50%)	A7E320	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; response to stress [GO:0006950]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013447	Chromosome_5A	2152	4	30	38.847583643122675	0.3997547972433266	90.90247452692867	30	1	88.47583643122677	14	1	92.46411483253588	16	1	95.78583765112262	59	1	methylated (>=50%)	F6UA42	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase UHRF1) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013448	Chromosome_5A	406	2	6	38.916256157635466	0.40492021276595747	89.90825688073394	3	1	90.9090909090909	2	1	85.71428571428571	1	1	81.49951314508276	21	1	NA	A7E320	E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)	chromosomal DNA methylation maintenance following DNA replication [GO:0141119]; heterochromatin formation [GO:0031507]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of transcription by RNA polymerase II [GO:0000122]; protein ubiquitination [GO:0016567]; response to stress [GO:0006950]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN013444	Chromosome_5A	342	1	19	51.75438596491228	0.8766864543982731	96.09665427509293	19	1	96.09665427509293	19	1	NA	NA	NA	90.2892561983471	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013449	Chromosome_5A	3698	4	62	37.26338561384532	0.4834190773382812	91.26145172656801	62	0.9838709677419355	94.75409836065573	8	1	90.84090011843664	54	0.9814814814814815	89.77272727272727	22	1	methylated (>=50%)	Q3UFS0	Protein zyg-11 homolog B	positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]	hit with GO BP
GN013450	Chromosome_5A	426	1	28	45.070422535211264	1.3470355731225296	2.380952380952381	3	0	2.380952380952381	3	0	NA	NA	NA	0.4297994269340974	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013788	Chromosome_5A	576	1	28	42.013888888888886	1.101564100812786	1.0091743119266054	28	0	1.0091743119266054	28	0	NA	NA	NA	0.6180469715698393	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013452	Chromosome_5A	656	2	24	44.359756097560975	0.787987987987988	0.5956813104988831	24	0	0.38095238095238093	15	0	1.3651877133105803	9	0	0.6762468300929839	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013453	Chromosome_5A	342	1	8	42.39766081871345	0.5211428571428571	0	8	0	0	8	0	NA	NA	NA	9.649122807017545	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013789	Chromosome_5A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN013790	Chromosome_5A	1938	3	22	34.00412796697626	0.39272687078589585	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	A7RWP6	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6)	formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	hit with GO BP
GN013791	Chromosome_5A	3599	2	51	35.815504306751876	0.442022598543521	0	2	0	0	1	0	0	1	0	2.6548672566371683	4	0	NA	D2H0Y8	E3 ubiquitin-protein ligase RNF146 (EC 2.3.2.27) (Iduna) (RING finger protein 146) (RING-type E3 ubiquitin transferase RNF146)	positive regulation of canonical Wnt signaling pathway [GO:0090263]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; ubiquitin-dependent protein catabolic process [GO:0006511]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN013792	Chromosome_5A	8585	8	126	33.64006988934187	0.5226886931260574	64.94845360824742	5	0.8	NA	NA	NA	64.94845360824742	5	0.8	1.4285714285714286	5	0	methylated (>=50%)	Q9NUQ2	1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon (EC 2.3.1.51) (1-acylglycerol-3-phosphate O-acyltransferase 5) (1-AGP acyltransferase 5) (1-AGPAT 5) (Lysophosphatidic acid acyltransferase epsilon) (LPAAT-epsilon)	CDP-diacylglycerol biosynthetic process [GO:0016024]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylinositol acyl-chain remodeling [GO:0036149]; phospholipid biosynthetic process [GO:0008654]	hit with GO BP
GN013793	Chromosome_5A	2334	4	80	42.630676949443014	0.7570670948280056	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN013794	Chromosome_5A	1398	1	53	41.63090128755365	0.8850215002388916	0.8172796263864565	53	0	0.8172796263864565	53	0	NA	NA	NA	0.9932600212841434	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013795	Chromosome_5A	15463	9	315	36.70697794735821	0.6048418941901541	1.3028372900984366	100	0	0.9737098344693281	29	0	1.442109600329625	71	0	0	1	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013796	Chromosome_5A	3599	2	52	35.87107529869408	0.44929394196928013	70.4	6	1	NA	NA	NA	70.4	6	1	48.62385321100918	3	0.6666666666666666	methylated (>=50%)	D2H0Y8	E3 ubiquitin-protein ligase RNF146 (EC 2.3.2.27) (Iduna) (RING finger protein 146) (RING-type E3 ubiquitin transferase RNF146)	positive regulation of canonical Wnt signaling pathway [GO:0090263]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; ubiquitin-dependent protein catabolic process [GO:0006511]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN013797	Chromosome_5A	7794	12	77	33.42314600975109	0.35750504561906826	90.10309278350516	19	0.9473684210526315	96.33802816901408	6	1	86.5040650406504	13	0.9230769230769231	NA	NA	NA	methylated (>=50%)	Q3T102	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6) (eIF-3 p48)	formation of cytoplasmic translation initiation complex [GO:0001732]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; translational initiation [GO:0006413]	hit with GO BP
GN013390	Chromosome_5A	1049	4	19	34.50905624404194	0.6166769801980198	86.53250773993808	19	0.9473684210526315	66.66666666666667	1	1	88.23529411764706	18	0.9444444444444444	63.862928348909655	4	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013391	Chromosome_5A	4682	6	34	33.55403673643742	0.2605351192463552	72.33494363929147	29	0.896551724137931	64.88636363636364	12	0.9166666666666666	75.28089887640449	17	0.8823529411764706	21.624938635247915	31	0.1935483870967742	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013392	Chromosome_5A	8006	11	88	33.037721708718465	0.4055458274475402	93.03335306887705	88	1	92.86351471900089	23	1	93.08160162189559	65	1	69.71982758620689	31	0.7741935483870968	methylated (>=50%)	Q3T102	Eukaryotic translation initiation factor 3 subunit E (eIF3e) (Eukaryotic translation initiation factor 3 subunit 6) (eIF-3 p48)	formation of cytoplasmic translation initiation complex [GO:0001732]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; translational initiation [GO:0006413]	hit with GO BP
GN013798	Chromosome_5A	240	1	14	40.416666666666664	1.4634146341463414	5.684754521963824	14	0	5.684754521963824	14	0	NA	NA	NA	3.61733382298935	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013393	Chromosome_5A	11661	6	267	35.03987651144842	0.7468786769865172	2.045877247365158	259	0	2.9978586723768736	39	0	1.9299313222637573	220	0	2.4013248688931825	62	0	unmethylated (<10%)	Q5M7L6	R-spondin-2 (Roof plate-specific spondin-2)	BMP signaling pathway [GO:0030509]; dorsal/ventral axis specification [GO:0009950]; lysosomal protein catabolic process [GO:1905146]; negative regulation of BMP signaling pathway [GO:0030514]; positive regulation of canonical Wnt signaling pathway [GO:0090263]	hit with GO BP
GN013799	Chromosome_5A	8280	13	106	33.63526570048309	0.4561049403053795	64.46798985226086	106	0.71698113207547165	68.65603644646924	39	0.7435897435897436	62.427873945849974	67	0.7014925373134329	1.1916264090177133	63	0	methylated (>=50%)	Q3TYL0	IQ motif and ankyrin repeat domain-containing protein 1	NA	hit, no GO BP
GN013800	Chromosome_5A	1029	3	24	35.8600583090379	0.7336898395721925	1.0416666666666667	24	0	1.2557077625570776	15	0	0.7092198581560284	9	0	0.7017543859649122	23	0	unmethylated (<10%)	Q3TYL0	IQ motif and ankyrin repeat domain-containing protein 1	NA	hit, no GO BP
GN013801	Chromosome_5A	3738	3	77	34.216158373461745	0.7048339700264472	88.43512158901058	77	0.8701298701298701	71.61825726141079	23	0.6086956521739131	93.28072692491631	54	0.9814814814814815	0.8090614886731392	31	0	methylated (>=50%)	Q5EAE5	Josephin-1 (EC 3.4.19.12) (Josephin domain-containing protein 1)	protein deubiquitination [GO:0016579]	hit with GO BP
GN013802	Chromosome_5A	6269	4	151	34.710480140373264	0.7999802248452003	0.7222787385554426	151	0	0.48833423765599565	30	0	0.7762614248153249	121	0	1.8365472910927456	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013803	Chromosome_5A	451	2	15	42.350332594235034	0.7940140845070423	0.5597014925373134	15	0	0.6338028169014085	13	0	0	2	0	5.104136110296275	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013804	Chromosome_5A	3944	5	72	39.9340770791075	0.46444471340204835	0.7097232079489	72	0	0.5519779208831647	34	0	0.8087810514153668	38	0	0.8337193144974525	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013805	Chromosome_5A	5847	6	209	37.728749786215154	1.0059085726985748	0.8476372112735749	209	0	0.18975332068311196	40	0	0.9800178185057911	169	0	1.1534025374855825	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013806	Chromosome_5A	1881	5	73	39.81924508240298	0.9794499051314607	0.6433166547533953	73	0	0.6086956521739131	67	0	0.8032128514056225	6	0	0.5829204313611193	56	0	unmethylated (<10%)	Q8NBH2	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN013807	Chromosome_5A	1107	1	62	44.08310749774164	1.1560968214664713	1.285583103764922	36	0	1.285583103764922	36	0	NA	NA	NA	0.8178438661710037	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013808	Chromosome_5A	1107	1	62	44.173441734417345	1.1511136455118745	16.310461192350957	43	0.023255813953488372	16.310461192350957	43	0.023255813953488372	NA	NA	NA	74.06323185011709	28	0.9285714285714286	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013809	Chromosome_5A	3220	5	32	34.72049689440994	0.33070052410127704	54.70779220779221	32	0.6875	61.509433962264154	9	0.7777777777777778	52.34135667396061	23	0.6521739130434783	59.044098230789544	23	0.8695652173913043	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013810	Chromosome_5A	6179	4	67	33.43583104062146	0.38798809774841264	62.93863948245442	53	0.8301886792452831	61.924174480228295	16	0.875	63.25977545489741	37	0.8108108108108109	60.46110751993105	16	0.8125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013811	Chromosome_5A	669	1	7	42.30194319880419	0.23637189582071472	76.33744855967078	7	1	76.33744855967078	7	1	NA	NA	NA	47.74166314900802	15	0.4666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013812	Chromosome_5A	5804	8	93	36.61268090971743	0.4814020066889632	94.81188799175399	93	0.989247311827957	95.42114188807236	37	1	94.54590325765054	56	0.9821428571428571	91.30434782608695	20	1	methylated (>=50%)	P81431	Alcohol dehydrogenase class-3 (EC 1.1.1.1) (Alcohol dehydrogenase class-III) (Glutathione-dependent formaldehyde dehydrogenase) (FALDH) (FDH) (GSH-FDH) (EC 1.1.1.-) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284)	formaldehyde catabolic process [GO:0046294]	hit with GO BP
GN013813	Chromosome_5A	372	1	14	43.81720430107527	0.7841011743450768	7.926829268292683	12	0	7.926829268292683	12	0	NA	NA	NA	1.0827067669172932	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013814	Chromosome_5A	6469	2	160	39.26418302674293	0.6454916179760285	0.6885155604516662	160	0	0.6757708010699705	158	0	1.2578616352201257	2	0	2.42451967063129	49	0	unmethylated (<10%)	Q8R151	NFX1-type zinc finger-containing protein 1 (ATP- dependent RNA translocase ZNFX1) (EC 3.6.4.-) (E3 ubiquitin-protein and -ssRNA ligase ZNFX1) (EC 2.3.2.27)	activation of innate immune response [GO:0002218]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; negative regulation of viral genome replication [GO:0045071]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN013815	Chromosome_5A	5422	2	179	40.022132054592404	0.8287114873443931	0.6027727546714888	179	0	0.5838967424708051	177	0	1.5625	2	0	2.7342325920524972	44	0	unmethylated (<10%)	Q9P2E3	NFX1-type zinc finger-containing protein 1 (ATP- dependent RNA translocase ZNFX1) (EC 3.6.4.-) (E3 ubiquitin-protein and -ssRNA ligase ZNFX1) (EC 2.3.2.27)	activation of innate immune response [GO:0002218]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; negative regulation of NLRP3 inflammasome complex assembly [GO:1900226]; negative regulation of viral genome replication [GO:0045071]; regulatory ncRNA-mediated heterochromatin formation [GO:0031048]	hit with GO BP
GN013816	Chromosome_5A	1545	1	54	40.64724919093851	0.8499821710559828	0.3897116134060795	49	0	0.3897116134060795	49	0	NA	NA	NA	0.944206008583691	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013817	Chromosome_5A	201	1	11	43.78109452736319	1.1569858712715855	0	11	0	0	11	0	NA	NA	NA	4.490080055690916	81	0.1728395061728395	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013818	Chromosome_5A	258	1	7	44.96124031007752	0.5447963800904977	94.10029498525074	7	1	94.10029498525074	7	1	NA	NA	NA	68.42723004694835	36	0.6944444444444444	methylated (>=50%)	Q80TE7	Leucine-rich repeat-containing protein 7 (Densin-180) (Densin) (Protein LAP1)	cell-cell adhesion [GO:0098609]; clustering of voltage-gated calcium channels [GO:0070073]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; positive regulation of neuron projection development [GO:0010976]; receptor clustering [GO:0043113]; regulation of long-term synaptic depression [GO:1900452]	hit with GO BP
GN013819	Chromosome_5A	656	2	32	46.1890243902439	0.9255731922398589	0.4700352526439483	32	0	0.5215123859191656	29	0	0	3	0	0.5578800557880056	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013419	Chromosome_5A	11178	9	299	36.160314904276255	0.8193503880256291	2.1752815275932016	288	0	1.2244897959183674	39	0	2.3263354137958987	249	0	0.5344021376085505	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013820	Chromosome_5A	856	3	35	43.22429906542056	0.9041525832930951	7.525083612040134	24	0	9.151785714285714	20	0	2.6666666666666665	4	0	2.5873221216041395	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013821	Chromosome_5A	312	1	10	44.23076923076923	0.6642537790078774	2.898550724637681	10	0	2.898550724637681	10	0	NA	NA	NA	2.5073129962390306	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013822	Chromosome_5A	9412	6	223	36.37909052273693	0.7171113771538529	0.6431986093003043	223	0	0.7879185817465528	29	0	0.6211180124223602	194	0	0.6134969325153374	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013823	Chromosome_5A	306	1	11	44.77124183006536	0.7260569456427955	0.2881844380403458	11	0	0.2881844380403458	11	0	NA	NA	NA	0.49573120352519967	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013824	Chromosome_5A	1308	2	42	43.42507645259939	0.6852267624607095	22.417285617825794	39	0.23076923076923078	23.813291139240505	36	0.25	14.285714285714286	3	0	0.6380510440835266	40	0	sparse (10-50%)	Q9UDY4	DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (HSP40 homolog) (Heat shock protein 40 homolog) (Human liver DnaJ-like protein)	negative regulation of transcription by RNA polymerase II [GO:0000122]; protein folding [GO:0006457]; response to heat [GO:0009408]; response to unfolded protein [GO:0006986]	hit with GO BP
GN013825	Chromosome_5A	1962	2	65	38.277268093781856	0.9053156146179402	0.4851004851004851	65	0	0.4177109440267335	54	0	0.8130081300813008	11	0	0.6147540983606558	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013826	Chromosome_5A	10263	8	276	36.69492351164377	0.800019657418642	0.7061536244415622	270	0	0.9395973154362416	18	0	0.6929109875885174	252	0	0.3654636820465966	35	0	unmethylated (<10%)	Q8BLA8	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Wasabi receptor)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cellular response to caffeine [GO:0071313]; cellular response to carbon dioxide [GO:0071244]; cellular response to cold [GO:0070417]; cellular response to food [GO:0071240]; cellular response to heat [GO:0034605]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; intracellular calcium ion homeostasis [GO:0006874]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of monoatomic anion transport [GO:1903793]; protein homotetramerization [GO:0051289]; regulation of blood circulation [GO:1903522]; regulation of neuronal action potential [GO:0098908]; response to cold [GO:0009409]; response to hydrogen peroxide [GO:0042542]; response to pain [GO:0048265]; response to xenobiotic stimulus [GO:0009410]; sensory perception of pain [GO:0019233]; thermoception [GO:0050955]; ureteric peristalsis [GO:0072105]; urinary bladder smooth muscle contraction [GO:0014832]; vasodilation [GO:0042311]	hit with GO BP
GN013827	Chromosome_5A	735	1	56	50.06802721088435	1.2669683257918551	0.3508771929824561	56	0	0.3508771929824561	56	0	NA	NA	NA	0.36985668053629217	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013432	Chromosome_5A	2362	9	64	38.357324301439455	0.7367831049894479	0.7068607068607069	64	0	0.6031363088057901	46	0	0.9370816599732262	18	0	0.4356243949661181	41	0	unmethylated (<10%)	Q7Z020	Transient receptor potential cation channel subfamily A member 1 (dTRPA1) (Ankyrin-like with transmembrane domains protein 1) (dANKTM1)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transport [GO:0006816]; cellular response to heat [GO:0034605]; cellular response to pulsatile fluid shear stress [GO:0097703]; detection of chemical stimulus involved in sensory perception of bitter taste [GO:0001580]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of hot stimulus involved in thermoception [GO:0120168]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; detection of temperature stimulus involved in thermoception [GO:0050960]; mechanosensory behavior [GO:0007638]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; negative phototaxis [GO:0046957]; neuronal signal transduction [GO:0023041]; phototransduction [GO:0007602]; positive regulation of calcium-mediated signaling [GO:0050850]; response to heat [GO:0009408]; response to light stimulus [GO:0009416]; temperature compensation of the circadian clock [GO:0010378]; thermoception [GO:0050955]; thermosensory behavior [GO:0040040]; thermotaxis [GO:0043052]	hit with GO BP
GN013828	Chromosome_5A	7149	15	176	36.63449433487201	0.7338945246516663	0.676083544609441	176	0	0.5113454777884308	77	0	0.7760962359332557	99	0	0.7439553626782393	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013829	Chromosome_5A	261	1	1	45.593869731800766	0.1	2.898550724637681	1	0	2.898550724637681	1	0	NA	NA	NA	0.8485931219294328	48	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013830	Chromosome_5A	7192	4	149	38.05617352614016	0.5795852934845277	85.1286068677373	134	0.8731343283582089	66.14466815809098	24	0.6666666666666666	89.15796138018361	110	0.9181818181818182	32.31605351170568	49	0.30612244897959184	methylated (>=50%)	Q1HPL8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	NA	hit, no GO BP
GN013831	Chromosome_5A	9719	8	281	38.42987961724457	0.7840454906401062	88.70715249662618	281	0.8790035587188612	64.65517241379311	45	0.5555555555555556	91.38520607115004	236	0.940677966101695	54.4924154025671	59	0.5254237288135594	methylated (>=50%)	Q29293	Large ribosomal subunit protein uL3 (60S ribosomal protein L3)	cytoplasmic translation [GO:0002181]; translation [GO:0006412]	hit with GO BP
GN013832	Chromosome_5A	13348	9	445	39.608930176805515	0.8500346175455288	1.903485254691689	413	0.026634382566585957	4.281909444785905	196	0.05612244897959184	0.747086363183584	217	0	1.18946474086661	37	0	unmethylated (<10%)	Q5XX13	F-box/WD repeat-containing protein 10 (F-box and WD-40 domain-containing protein 10) (Ubiquitin ligase-specificity factor)	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN013833	Chromosome_5A	6918	7	100	37.294015611448394	0.41572045893904147	71.10266159695817	100	0.83	75.9379042690815	39	0.8205128205128205	69.08992999461498	61	0.8360655737704918	52.66229029905179	19	0.631578947368421	methylated (>=50%)	Q5E9S4	Ethanolamine-phosphate phospho-lyase (EC 4.2.3.2) (Alanine--glyoxylate aminotransferase 2-like 1)	NA	hit, no GO BP
GN013834	Chromosome_5A	35748	20	435	36.374062884636906	0.36807340648228887	84.21993564022088	426	0.960093896713615	92.1875	54	1	83.36778222437222	372	0.9543010752688172	76.85185185185185	16	0.8125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013835	Chromosome_5A	1035	1	61	48.309178743961354	1.028073146504698	0.4276827371695179	61	0	0.4276827371695179	61	0	NA	NA	NA	0.6655574043261231	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013836	Chromosome_5A	600	1	37	48.333333333333336	1.3649778652238072	0	5	0	0	5	0	NA	NA	NA	0.49261083743842365	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013837	Chromosome_5A	354	1	14	50	0.6352217380158933	0.8849557522123894	14	0	0.8849557522123894	14	0	NA	NA	NA	0.30943785456420836	64	0	unmethylated (<10%)	Q5E9A1	Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC)	protein targeting to membrane [GO:0006612]	hit with GO BP
GN013838	Chromosome_5A	168	1	6	50.595238095238095	0.5813148788927336	0.6802721088435374	6	0	0.6802721088435374	6	0	NA	NA	NA	0.47244094488188976	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013839	Chromosome_5A	1002	1	45	42.61477045908184	0.9904230549576066	0.7566938300349243	45	0	0.7566938300349243	45	0	NA	NA	NA	0.8984481350394773	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013840	Chromosome_5A	1002	1	51	44.31137724550898	1.0370776255707763	0.5780346820809249	51	0	0.5780346820809249	51	0	NA	NA	NA	6.589366515837104	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013423	Chromosome_5A	5942	7	122	36.28407943453383	0.627012814025801	1.0447422212128095	114	0	1.408450704225352	23	0	0.9829968119022316	91	0	3.225806451612903	1	0	unmethylated (<10%)	A0JNC4	Very long chain fatty acid elongase 7 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELOVL7) (ELOVL fatty acid elongase 7) (ELOVL FA elongase 7) (Elongation of very long chain fatty acids protein 7) (Very long chain 3-ketoacyl-CoA synthase 7) (Very long chain 3-oxoacyl-CoA synthase 7)	fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty-acyl-CoA biosynthetic process [GO:0035338]; sphingolipid biosynthetic process [GO:0030148]; unsaturated fatty acid biosynthetic process [GO:0006636]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN013841	Chromosome_5A	204	1	7	42.64705882352941	0.8350877192982457	0.31545741324921134	7	0	0.31545741324921134	7	0	NA	NA	NA	0.33003300330033003	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013424	Chromosome_5A	996	2	25	37.34939759036145	0.7200694042799306	0.299625468164794	25	0	0.49875311720698257	15	0	0	10	0	0.3712164477441462	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013842	Chromosome_5A	1001	2	25	36.463536463536464	0.7518175809649703	0.5460750853242321	25	0	0.44642857142857145	16	0	0.70298769771529	9	0	0.41254125412541254	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013425	Chromosome_5A	207	1	8	42.51207729468599	0.9857142857142858	0.34965034965034963	8	0	0.34965034965034963	8	0	NA	NA	NA	0.4089422028353326	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013843	Chromosome_5A	6050	7	103	35.04132231404959	0.5636081776774441	93.01681503461919	102	1	93.44086021505376	22	1	92.92121212121212	80	1	81.47100424328147	10	1	methylated (>=50%)	A0JNC4	Very long chain fatty acid elongase 7 (EC 2.3.1.199) (3-keto acyl-CoA synthase ELOVL7) (ELOVL fatty acid elongase 7) (ELOVL FA elongase 7) (Elongation of very long chain fatty acids protein 7) (Very long chain 3-ketoacyl-CoA synthase 7) (Very long chain 3-oxoacyl-CoA synthase 7)	fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; long-chain fatty-acyl-CoA biosynthetic process [GO:0035338]; sphingolipid biosynthetic process [GO:0030148]; unsaturated fatty acid biosynthetic process [GO:0006636]; very long-chain fatty acid biosynthetic process [GO:0042761]	hit with GO BP
GN013844	Chromosome_5A	43379	26	833	38.74224855344752	0.5153960687234562	92.81639275620223	749	0.9773030707610146	95.01312335958005	98	0.9693877551020408	92.48925102979645	651	0.978494623655914	27.914110429447852	36	0.2222222222222222	methylated (>=50%)	Q0JRZ9	F-BAR domain only protein 2	clathrin coat assembly [GO:0048268]; clathrin-dependent endocytosis [GO:0072583]; membrane invagination [GO:0010324]; protein localization to plasma membrane [GO:0072659]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN013845	Chromosome_5A	901	3	18	47.502774694783575	0.3542053421276782	72.07792207792208	17	0.7647058823529411	71.15902964959568	14	0.7142857142857143	75.82417582417582	3	1	78.35112692763938	29	0.9655172413793104	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013291	Chromosome_5A	207	1	12	54.589371980676326	0.8007736943907157	80.95238095238095	12	0.9166666666666666	80.95238095238095	12	0.9166666666666666	NA	NA	NA	58.24022346368715	11	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013846	Chromosome_5A	318	1	4	43.39622641509434	0.32944832944832947	95.04132231404958	4	1	95.04132231404958	4	1	NA	NA	NA	84.94623655913979	25	0.96	NA	NA	NA	NA	no Swiss-Prot hit
GN013847	Chromosome_5A	9483	10	220	39.08045977011494	0.6235099714793187	88.92857142857143	205	0.9512195121951219	87.55905511811024	77	0.948051948051948	89.42693409742121	128	0.953125	50.242954324586975	47	0.40425531914893614	methylated (>=50%)	Q9CZU3	Exosome RNA helicase MTR4 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2) (Superkiller viralicidic activity 2-like 2) (TRAMP-like complex helicase)	DNA damage response [GO:0006974]; maturation of 5.8S rRNA [GO:0000460]; mRNA metabolic process [GO:0016071]; RNA catabolic process [GO:0006401]; rRNA processing [GO:0006364]	hit with GO BP
GN013848	Chromosome_5A	943	4	4	29.798515376458113	0.19566345056541135	83.56164383561644	4	1	77.77777777777777	2	1	88.33333333333333	2	1	88.57142857142857	11	1	NA	H9D1R1	Thioredoxin domain-containing protein 12 (EC 1.8.4.2)	defense response to virus [GO:0051607]	hit with GO BP
GN013849	Chromosome_5A	603	1	36	50.74626865671642	0.9276923076923077	0.6201550387596899	34	0	0.6201550387596899	34	0	NA	NA	NA	0.39800995024875624	52	0	unmethylated (<10%)	Q66IC8	Dynein light chain Tctex-type 5 (Tctex1 domain-containing protein 1)	cilium assembly [GO:0060271]; microtubule-based movement [GO:0007018]	hit with GO BP
GN013850	Chromosome_5A	1286	2	33	38.102643856920686	0.7185087362860626	0.7648183556405354	33	0	0.7985803016858918	28	0	0.554016620498615	5	0	1.244167962674961	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013851	Chromosome_5A	1227	1	31	45.15077424612877	0.5042488035740326	1.8231540565177757	31	0	1.8231540565177757	31	0	NA	NA	NA	0.6634345496300077	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013852	Chromosome_6A	825	3	6	36.60606060606061	0.2174390511750494	2.112676056338028	5	0	3.5714285714285716	3	0	0	2	0	0.4051863857374392	24	0	unmethylated (<10%)	Q8BR93	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN013853	Chromosome_6A	405	1	20	45.67901234567901	0.9642857142857143	1.1156186612576064	17	0	1.1156186612576064	17	0	NA	NA	NA	0.5754315736802602	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013854	Chromosome_6A	339	1	12	49.557522123893804	0.5848188614146062	0.3875968992248062	11	0	0.3875968992248062	11	0	NA	NA	NA	0.4726536124240378	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013855	Chromosome_6A	1935	3	26	37.2093023255814	0.38906202875238766	3.125	3	0	NA	NA	NA	3.125	3	0	0.9338205440519691	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013856	Chromosome_6A	1185	2	28	38.312236286919834	0.6463678335573607	0.6818181818181818	16	0	0.6818181818181818	16	0	NA	NA	NA	1.8284106891701828	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013857	Chromosome_6A	315	1	25	46.03174603174603	1.5040106951871657	0.4459308807134894	25	0	0.4459308807134894	25	0	NA	NA	NA	1.3892159171179657	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013858	Chromosome_6A	414	1	1	40.33816425120773	0.06244343891402715	0	1	0	0	1	0	NA	NA	NA	0.51440329218107	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013859	Chromosome_6A	435	1	9	55.172413793103445	0.3021765977153442	1.6666666666666667	5	0	1.6666666666666667	5	0	NA	NA	NA	3.54796320630749	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013860	Chromosome_6A	2319	6	26	34.32514014661492	0.38072085269751466	14.079785450888368	19	0	15.895278167367929	15	0	9.47867298578199	4	0	4.960835509138382	28	0.03571428571428571	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013861	Chromosome_6A	207	1	4	45.410628019323674	0.3890977443609023	0.6211180124223602	4	0	0.6211180124223602	4	0	NA	NA	NA	0.6107491856677525	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013862	Chromosome_6A	608	2	7	42.26973684210526	0.25775193798449614	0.3952569169960474	7	0	0.4484304932735426	6	0	0	1	0	0.6809338521400778	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013863	Chromosome_6A	276	1	6	47.82608695652174	0.38235973216347263	0.6092254134029591	5	0	0.6092254134029591	5	0	NA	NA	NA	0.6405933917734322	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013864	Chromosome_6A	1359	4	8	35.467255334805	0.1893911680167233	1.0501750291715286	8	0	1.1235955056179776	7	0	0	1	0	1.070336391437309	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013865	Chromosome_6A	22915	5	511	36.04625790966616	0.6866048847859416	0.6892188852633682	422	0	0.7736595897804965	68	0	0.6700441248570028	354	0	0.7703870725291244	51	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN013866	Chromosome_6A	285	1	9	48.07017543859649	0.6004213483146067	0	7	0	0	7	0	NA	NA	NA	0.48833423765599565	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013867	Chromosome_6A	17803	8	425	36.30848733359546	0.7304200998590666	0.7170957621632389	419	0	0.575287643821911	106	0	0.7523471989056768	313	0	0.7892659826361483	56	0	unmethylated (<10%)	P57058	Hormonally up-regulated neu tumor-associated kinase (EC 2.7.11.1) (B19) (Serine/threonine-protein kinase MAK-V)	intracellular signal transduction [GO:0035556]; signal transduction [GO:0007165]	hit with GO BP
GN013868	Chromosome_6A	6921	4	245	38.8816644993498	0.9367231469880477	1.3761467889908257	212	0	1.0894941634241244	25	0	1.418277479126158	187	0	0.6369426751592356	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013869	Chromosome_6A	1170	1	7	40.085470085470085	0.1503193598120549	2.097902097902098	7	0	2.097902097902098	7	0	NA	NA	NA	0.6931316950220542	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013870	Chromosome_6A	519	1	32	48.554913294797686	1.0591836734693878	0.8119079837618404	32	0	0.8119079837618404	32	0	NA	NA	NA	0.6538084341288003	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013871	Chromosome_6A	522	1	34	48.275862068965516	1.1264995239606475	1.0005885815185402	34	0	1.0005885815185402	34	0	NA	NA	NA	0.5224085784987628	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013872	Chromosome_6A	1788	2	28	40.939597315436245	0.3742067614940166	85.75727181544634	28	1	90.28697571743929	14	1	81.98529411764706	14	1	83.6318715256331	26	0.9615384615384616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013873	Chromosome_6A	1134	1	45	41.97530864197531	0.9016697588126159	0.40229885057471265	45	0	0.40229885057471265	45	0	NA	NA	NA	0.9108473640629313	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013874	Chromosome_6A	1134	1	46	41.7989417989418	0.9289619432621588	0.7941760423560555	46	0	0.7941760423560555	46	0	NA	NA	NA	0.44642857142857145	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013875	Chromosome_6A	1706	5	36	38.21805392731536	0.580782433544214	2.6392961876832843	34	0	2.5367156208277706	19	0	2.7642276422764227	15	0	1.1319900384876613	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013876	Chromosome_6A	854	3	27	37.3536299765808	0.9083674755751655	0.5628517823639775	27	0	0.7128309572301426	20	0	0.3241491085899514	7	0	0.3640776699029126	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013877	Chromosome_6A	11804	10	319	36.6401219925449	0.8200049825610364	44.16620421753607	308	0.4707792207792208	16.00598354525056	33	0.15151515151515152	47.04488110711828	275	0.509090909090909	0.6486855582109935	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013878	Chromosome_6A	13742	10	213	34.230825207393394	0.5398120332852422	86.67291722475221	211	0.933649289099526	90.33457249070632	33	0.9393939393939394	86.14453214805732	178	0.9325842696629213	60.071474983755685	70	0.6	methylated (>=50%)	Q5ZIN1	Nuclear migration protein nudC (Nuclear distribution protein C homolog)	mitotic metaphase chromosome alignment [GO:0007080]; mitotic spindle organization [GO:0007052]	hit with GO BP
GN013879	Chromosome_6A	4287	4	93	41.12432936785631	0.5186764151066128	84.8696179502729	80	0.975	87.05263157894737	30	1	83.98637137989779	50	0.96	76.13516367476241	57	0.8070175438596491	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013880	Chromosome_6A	7102	4	212	35.736412278231484	0.9351283669301745	63.49980742072153	212	0.6367924528301887	53.25112107623318	16	0.5625	64.12229334059649	196	0.6428571428571429	11.214025802183262	61	0	methylated (>=50%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN013881	Chromosome_6A	255	1	17	45.88235294117647	1.3273116962645437	0.7376185458377239	17	0	0.7376185458377239	17	0	NA	NA	NA	0.436046511627907	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013882	Chromosome_6A	15288	5	204	31.148613291470433	0.5597369762861918	86.41137063190295	204	0.8725490196078431	56.103427540589294	46	0.43478260869565216	91.78301182990515	158	1	0.6864988558352403	94	0	methylated (>=50%)	Q9UJA9	Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 (E-NPP 5) (NPP-5) (EC 3.1.-.-)	cell communication [GO:0007154]	hit with GO BP
GN013883	Chromosome_6A	62170	43	1350	38.5201865851697	0.6039724033412618	81.87286295455112	1321	0.8660105980317941	84.65520266713459	221	0.9049773755656109	81.4114874301676	1100	0.8581818181818182	5.314285714285714	59	0	methylated (>=50%)	Q92621	Nuclear pore complex protein Nup205 (205 kDa nucleoporin) (Nucleoporin Nup205)	nuclear pore complex assembly [GO:0051292]; nuclear pore organization [GO:0006999]; nucleocytoplasmic transport [GO:0006913]	hit with GO BP
GN013884	Chromosome_6A	2354	2	85	40.95157179269329	0.863052104899931	0.6495615459564794	85	0	0.6495615459564794	85	0	NA	NA	NA	0.6639616377720399	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013885	Chromosome_6A	9615	6	157	36.640665626625065	0.4877884455060471	19.021801822586227	156	0.1794871794871795	11.084905660377359	25	0.04	19.882367983633806	131	0.20610687022900764	0.6964596633778294	61	0	sparse (10-50%)	Q8JHV9	Baculoviral IAP repeat-containing protein 7-A (EC 2.3.2.27) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (RING-type E3 ubiquitin transferase EIAP-A) (XIAP homolog XLX) (XLX)	negative regulation of apoptotic process [GO:0043066]; positive regulation of protein ubiquitination [GO:0031398]; protein autoubiquitination [GO:0051865]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN013886	Chromosome_6A	4234	3	76	39.86773736419462	0.4532583968954904	91.13815929959428	76	1	89.01408450704226	28	1	92.06251915415262	48	1	91.70265969538532	63	1	methylated (>=50%)	Q9D920	BLOC-1-related complex subunit 5	axon development [GO:0061564]; lysosome localization [GO:0032418]; mitochondrion organization [GO:0007005]; mRNA transport [GO:0051028]; nervous system development [GO:0007399]; organelle transport along microtubule [GO:0072384]; positive regulation of anterograde synaptic vesicle transport [GO:1903744]; regulation of endosome size [GO:0051036]; regulation of lysosome size [GO:0062196]	hit with GO BP
GN013887	Chromosome_6A	1037	2	26	36.451301832208294	0.7555555555555555	0.721370604147881	26	0	0.5689900426742532	18	0	0.9852216748768473	8	0	0.7547169811320755	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013888	Chromosome_6A	893	2	22	36.058230683090706	0.7580352664274415	0.6082725060827251	22	0	0.591715976331361	14	0	0.6349206349206349	8	0	0.9398496240601504	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013889	Chromosome_6A	14764	10	342	35.69493362232458	0.7272554435184193	0.9723347609677045	341	0	0.5112910097997444	36	0	1.0448061080972473	305	0	0.5563282336578581	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013890	Chromosome_6A	1854	1	86	43.85113268608414	0.9650872817955112	0.6894570525711002	86	0	0.6894570525711002	86	0	NA	NA	NA	0.495458298926507	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013891	Chromosome_6A	213	1	9	49.76525821596244	0.6885775862068966	0	9	0	0	9	0	NA	NA	NA	0.6558810668998688	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013892	Chromosome_6A	972	1	72	47.839506172839506	1.306890756302521	0.7969639468690702	72	0	0.7969639468690702	72	0	NA	NA	NA	0.5596362364463099	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013893	Chromosome_6A	957	1	56	49.42528735632184	0.9617745235275116	0.7431874483897605	56	0	0.7431874483897605	56	0	NA	NA	NA	0.2977801840822956	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013894	Chromosome_6A	3275	3	54	37.9236641221374	0.4629084312940234	89.35721812434141	52	1	94.63667820069205	12	1	88.0123402379903	40	1	43.245078071961984	31	0.25806451612903225	methylated (>=50%)	B0BLT0	Zinc finger protein 593	NA	hit, no GO BP
GN013895	Chromosome_6A	1344	1	46	39.211309523809526	0.8943668084367676	1.5287295730100159	46	0	1.5287295730100159	46	0	NA	NA	NA	0.732728541521284	55	0	unmethylated (<10%)	T1PRE3	Toxin CfTX-A (Toxin A) (TX-A)	NA	hit, no GO BP
GN013896	Chromosome_6A	1335	1	47	40.29962546816479	0.8724276974416018	0.5067567567567568	47	0	0.5067567567567568	47	0	NA	NA	NA	0.40899795501022496	58	0	unmethylated (<10%)	Q9GNN8	Toxin CaTX-A (Toxin-A) (CAT-1) (Toxin CaTX-B) (Toxin-B)	NA	hit, no GO BP
GN013897	Chromosome_6A	1164	1	33	37.97250859106529	0.7892011834319527	0.5091649694501018	33	0	0.5091649694501018	33	0	NA	NA	NA	0.391041592605759	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013898	Chromosome_6A	5692	3	121	36.96416022487702	0.6237361936743573	85.90088876918934	121	0.8347107438016529	73.30791229742611	42	0.6428571428571429	90.8596096096096	79	0.9367088607594937	85.4157960718763	31	0.9354838709677419	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013899	Chromosome_6A	2881	5	56	38.07705657757723	0.5365882861609073	75.9825327510917	51	0.6470588235294118	68.70937790157846	34	0.5588235294117647	82.44023083264634	17	0.8235294117647058	55.59467918622848	50	0.44	methylated (>=50%)	O75398	Deformed epidermal autoregulatory factor 1 homolog (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5)	anatomical structure morphogenesis [GO:0009653]; behavioral fear response [GO:0001662]; embryonic skeletal system development [GO:0048706]; germ cell development [GO:0007281]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural tube closure [GO:0001843]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of mammary gland epithelial cell proliferation [GO:0033599]; regulation of transcription by RNA polymerase II [GO:0006357]; transcription by RNA polymerase II [GO:0006366]; visual learning [GO:0008542]	hit with GO BP
GN013900	Chromosome_6A	1266	1	13	39.09952606635071	0.2691590619173781	0	5	0	0	5	0	NA	NA	NA	0.5703422053231939	22	0	unmethylated (<10%)	Q9H8Y1	Vertnin	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN013901	Chromosome_6A	1140	3	19	39.473684210526315	0.43236984988821464	37.35446313065977	19	0	38.300970873786405	13	0	35.46511627906977	6	0	5.090595340811044	23	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013902	Chromosome_6A	3195	2	58	39.78090766823161	0.4597076684924982	0.6343984962406015	57	0	0.6068965517241379	49	0	0.7923930269413629	8	0	0.7162957278076234	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013903	Chromosome_6A	35474	15	911	36.77059254665389	0.7606167750938785	0.9924626485341058	840	0	1.2336719883889695	87	0	0.9623797025371829	753	0	3.8192576654115116	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013904	Chromosome_6A	1108	2	40	38.35740072202166	0.9867307863567548	0.5755702408868045	40	0	0.6004618937644342	37	0	0.2770083102493075	3	0	0.46885465505693236	40	0	unmethylated (<10%)	Q26261	Netrin receptor unc-5 (Uncoordinated protein 5)	chemorepulsion of axon [GO:0061643]; commissural neuron axon guidance [GO:0071679]; distal tip cell migration [GO:0097628]; dorsal/ventral axon guidance [GO:0033563]; establishment or maintenance of actin cytoskeleton polarity [GO:0030950]; gonad morphogenesis [GO:0035262]; mesodermal cell migration [GO:0008078]; motor neuron axon guidance [GO:0008045]; negative regulation of microtubule polymerization [GO:0031115]; nematode male tail tip morphogenesis [GO:0045138]; netrin-activated signaling pathway [GO:0038007]; positive regulation of anterior/posterior axon guidance [GO:1905488]; positive regulation of axon extension [GO:0045773]; positive regulation of locomotion [GO:0040017]; regulation of dorsal/ventral axon guidance [GO:1905815]; ventral cord development [GO:0007419]	hit with GO BP
GN013905	Chromosome_6A	849	1	101	45.58303886925795	2.340950040950041	0.3002001334222815	101	0	0.3002001334222815	101	0	NA	NA	NA	0.7287259050305595	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013906	Chromosome_6A	360	1	14	43.611111111111114	0.8181818181818182	0.3597122302158273	14	0	0.3597122302158273	14	0	NA	NA	NA	0.34810126582278483	87	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013907	Chromosome_6A	1567	2	46	38.1620931716656	0.8115057697720236	0.41817674937273486	12	0	0.4108182129407737	10	0	0.45045045045045046	2	0	0.43273986152324434	32	0	unmethylated (<10%)	B3EWZ8	Ectin	NA	hit, no GO BP
GN013908	Chromosome_6A	16407	10	460	37.05735356859877	0.8182234195451366	2.8475404827375494	433	0	0.5323620061641916	88	0	3.493279149734292	345	0	0.4750593824228028	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013909	Chromosome_6A	285	1	11	42.45614035087719	0.8612637362637363	0.5128205128205128	11	0	0.5128205128205128	11	0	NA	NA	NA	0.7019438444924406	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013910	Chromosome_6A	886	2	26	34.988713318284425	0.965627095908786	0.7037747920665387	26	0	0.5703422053231939	12	0	0.7714561234329798	14	0	0.5	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013911	Chromosome_6A	8767	9	237	37.99475305121478	0.7501738436598513	0.4935742223877817	237	0	0.5141388174807198	98	0	0.47775947281713343	139	0	0.9105098855359001	72	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN013912	Chromosome_6A	5560	2	170	35.10791366906475	0.9923078295943317	0.765774964263835	166	0	0.6284916201117319	46	0	0.7892848600813203	120	0	0.5686920083807243	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013913	Chromosome_6A	12874	8	206	37.144632592822745	0.4639294698959027	89.94601361395821	206	1	95.01289767841789	75	1	88.04347826086956	131	1	4.998016660055534	59	0.06779661016949153	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013914	Chromosome_6A	519	1	23	44.1233140655106	0.943785578747628	0.5291005291005291	23	0	0.5291005291005291	23	0	NA	NA	NA	0.5960828839057621	68	0	unmethylated (<10%)	Q5R8X2	Dual specificity protein phosphatase 18 (EC 3.1.3.16) (EC 3.1.3.48)	dephosphorylation [GO:0016311]; negative regulation of bone resorption [GO:0045779]; peptidyl-threonine dephosphorylation [GO:0035970]; peptidyl-tyrosine dephosphorylation [GO:0035335]	hit with GO BP
GN013915	Chromosome_6A	270	2	7	33.7037037037037	0.9319526627218935	0.4830917874396135	7	0	0.4830917874396135	7	0	NA	NA	NA	1.1782032400589102	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013916	Chromosome_6A	582	1	36	51.03092783505155	0.9532302092811646	0.7407407407407407	36	0	0.7407407407407407	36	0	NA	NA	NA	0.9771986970684039	50	0	unmethylated (<10%)	Q17QM8	Dual specificity protein phosphatase 14 (EC 3.1.3.16) (EC 3.1.3.48)	NA	hit, no GO BP
GN013917	Chromosome_6A	2295	3	100	40.52287581699346	1.0621017118580531	0.5539552404165743	100	0	0.550357732526142	85	0	0.5688282138794084	15	0	0.6957621758380772	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013918	Chromosome_6A	4139	4	55	34.1386808407828	0.45657754868729816	89.78666666666666	55	1	94.32013769363166	16	1	87.75115919629057	39	1	28.747742323901264	52	0.36538461538461536	methylated (>=50%)	A5PJY4	Transmembrane protein 138	cilium assembly [GO:0060271]	hit with GO BP
GN013919	Chromosome_6A	4906	7	37	33.44883815735834	0.28036017669045193	86.7262969588551	37	1	87.5	9	1	86.4927806241267	28	1	90.44155844155844	39	1	methylated (>=50%)	Q9BSJ2	Gamma-tubulin complex component 2 (GCP-2) (hGCP2) (Gamma-ring complex protein 103 kDa) (h103p) (hGrip103) (Spindle pole body protein Spc97 homolog) (hSpc97)	brain development [GO:0007420]; meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; neuron migration [GO:0001764]; protein-containing complex assembly [GO:0065003]; spindle assembly [GO:0051225]	hit with GO BP
GN013920	Chromosome_6A	16022	11	323	37.648233678691795	0.570740356946391	90.14425919356746	323	1	95.54263565891473	39	1	89.6004165039698	284	1	NA	NA	NA	methylated (>=50%)	Q9BSJ2	Gamma-tubulin complex component 2 (GCP-2) (hGCP2) (Gamma-ring complex protein 103 kDa) (h103p) (hGrip103) (Spindle pole body protein Spc97 homolog) (hSpc97)	brain development [GO:0007420]; meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; neuron migration [GO:0001764]; protein-containing complex assembly [GO:0065003]; spindle assembly [GO:0051225]	hit with GO BP
GN013921	Chromosome_6A	825	1	37	41.09090909090909	1.098021582733813	0.24198427102238354	37	0	0.24198427102238354	37	0	NA	NA	NA	0.8417508417508418	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013922	Chromosome_6A	40212	33	624	35.56401074306177	0.492287042193216	86.25277161862527	615	0.9658536585365853	88.94504106127606	155	0.9870967741935484	85.58209800774242	460	0.9586956521739131	65.81515499425947	51	0.6470588235294118	methylated (>=50%)	Q5TB80	Centrosomal protein of 162 kDa (Cep162) (Protein QN1 homolog)	cilium assembly [GO:0060271]	hit with GO BP
GN013923	Chromosome_6A	9163	6	239	35.62152133580705	0.8222942234010757	0.7894125841653122	229	0	1.0512483574244416	27	0	0.7694998251136761	202	0	0.6289308176100629	44	0	unmethylated (<10%)	Q496A3	Spermatogenesis-associated serine-rich protein 1	NA	hit, no GO BP
GN015846	Chromosome_6A	194	1	25	55.670103092783506	1.6632373113854595	0.3257328990228013	25	0	0.3257328990228013	25	0	NA	NA	NA	0.34965034965034963	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013924	Chromosome_6A	306	1	8	52.287581699346404	0.3827392120075047	0.6211180124223602	8	0	0.6211180124223602	8	0	NA	NA	NA	0.6335797254487856	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013925	Chromosome_6A	1032	1	51	44.28294573643411	1.0082758620689656	1.2048192771084338	51	0	1.2048192771084338	51	0	NA	NA	NA	2.4330900243309004	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013926	Chromosome_6A	902	3	17	41.57427937915743	0.44438648351011417	85.40031397174255	17	0.9411764705882353	86.9328493647913	15	0.9333333333333333	75.5813953488372	2	1	88.4961884961885	42	0.9523809523809523	methylated (>=50%)	Q8CGS6	DNA polymerase theta (Chromosome aberrations occurring spontaneously protein 1) (DNA polymerase eta) [Includes: Helicase POLQ (EC 5.6.2.-); DNA polymerase POLQ (EC 2.7.7.7) (RNA-directed DNA polymerase POLQ) (EC 2.7.7.49)]	base-excision repair [GO:0006284]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; double-strand break repair [GO:0006302]; double-strand break repair via alternative nonhomologous end joining [GO:0097681]; error-prone translesion synthesis [GO:0042276]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; protein homooligomerization [GO:0051260]; replication fork processing [GO:0031297]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN013927	Chromosome_6A	32312	22	603	38.78744738796732	0.49653822206510345	90.99837756402827	599	0.993322203672788	91.85548710452125	211	0.995260663507109	90.66923292834517	388	0.9922680412371134	98.07692307692308	2	1	methylated (>=50%)	O75417	DNA polymerase theta (DNA polymerase eta) [Includes: Helicase POLQ (EC 5.6.2.4); DNA polymerase POLQ (EC 2.7.7.7) (RNA-directed DNA polymerase POLQ) (EC 2.7.7.49)]	base-excision repair [GO:0006284]; DNA damage response [GO:0006974]; DNA repair [GO:0006281]; double-strand break repair [GO:0006302]; double-strand break repair via alternative nonhomologous end joining [GO:0097681]; error-prone translesion synthesis [GO:0042276]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; protein homooligomerization [GO:0051260]; replication fork processing [GO:0031297]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN013928	Chromosome_6A	459	1	8	47.712418300653596	0.30857142857142855	88.78923766816143	8	1	88.78923766816143	8	1	NA	NA	NA	79.0650406504065	35	0.9428571428571428	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013929	Chromosome_6A	9270	4	241	35.98705501618123	0.803160340509182	22.508083790243216	239	0.2175732217573222	4.159733777038269	11	0.09090909090909091	23.31743119266055	228	0.2236842105263158	77.30528200537154	28	0.9285714285714286	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013930	Chromosome_6A	282	1	7	41.48936170212766	0.6266666666666667	0.7575757575757576	7	0	0.7575757575757576	7	0	NA	NA	NA	0.9066183136899365	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013931	Chromosome_6A	264	1	10	43.56060606060606	0.8088235294117647	0.85995085995086	10	0	0.85995085995086	10	0	NA	NA	NA	0.6369426751592356	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013932	Chromosome_6A	1185	1	24	38.48101265822785	0.5618887681517337	0.27472527472527475	24	0	0.27472527472527475	24	0	NA	NA	NA	0.7247598179673015	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020423	Chromosome_6A	858	1	12	38.11188811188811	0.398113061634831	0.7751937984496124	4	0	0.7751937984496124	4	0	NA	NA	NA	14.760147601476016	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013933	Chromosome_6A	1127	2	35	40.19520851818989	0.7765375226395779	1.566820276497696	35	0	1.744186046511628	28	0	0.8888888888888888	7	0	0.47538200339558573	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013934	Chromosome_6A	477	1	22	44.863731656184484	0.917869325636316	0.6666666666666666	22	0	0.6666666666666666	22	0	NA	NA	NA	0.47573739295908657	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013935	Chromosome_6A	966	1	27	38.50931677018634	0.7595224228305183	0.6398537477148081	27	0	0.6398537477148081	27	0	NA	NA	NA	0.49634273772204807	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013936	Chromosome_6A	570	1	22	39.12280701754386	1.0096618357487923	0.8695652173913043	22	0	0.8695652173913043	22	0	NA	NA	NA	0.5526468877254218	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013937	Chromosome_6A	597	1	11	39.698492462311556	0.4780867792661619	0.45351473922902497	11	0	0.45351473922902497	11	0	NA	NA	NA	0.46674445740956827	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013938	Chromosome_6A	177	1	2	42.93785310734463	0.2723076923076923	0.8064516129032258	2	0	0.8064516129032258	2	0	NA	NA	NA	0.7692307692307693	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013939	Chromosome_6A	312	1	5	47.11538461538461	0.2903946388682055	2.0618556701030926	5	0	2.0618556701030926	5	0	NA	NA	NA	0.45330915684496825	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013940	Chromosome_6A	1290	1	33	42.48062015503876	0.5670556265984654	0.8210180623973727	29	0	0.8210180623973727	29	0	NA	NA	NA	0.4697286012526096	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013941	Chromosome_6A	674	2	21	39.61424332344214	0.7950792045837546	0.39577836411609496	21	0	0.41841004184100417	20	0	0	1	0	0.8389261744966443	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013942	Chromosome_6A	2505	1	83	40.03992015968064	0.8268313051777618	64.59948320413437	22	0.6818181818181818	64.59948320413437	22	0.6818181818181818	NA	NA	NA	55.61277033985582	29	0.7241379310344828	methylated (>=50%)	P0AFQ9	Uncharacterized metal-dependent hydrolase YcfH (EC 3.1.-.-)	NA	hit, no GO BP
GN018700	Chromosome_6A	1195	1	18	41.67364016736402	0.34693548387096773	85.31073446327683	7	1	85.31073446327683	7	1	NA	NA	NA	56.28491620111732	49	0.7959183673469388	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013943	Chromosome_6A	534	1	10	43.258426966292134	0.4036281179138322	83.89830508474576	6	1	83.89830508474576	6	1	NA	NA	NA	67.4190382728165	25	0.96	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013944	Chromosome_6A	1318	2	16	38.998482549317146	0.32566830880422526	64.80117820324006	16	0.9375	64.80117820324006	16	0.9375	NA	NA	NA	5.118940078289672	43	0.023255813953488372	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010911	Chromosome_6A	502	1	26	44.42231075697211	1.0575271430886404	0.7017543859649122	26	0	0.7017543859649122	26	0	NA	NA	NA	0.5747126436781609	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013945	Chromosome_6A	1194	1	23	38.69346733668342	0.5289596856520985	0.5115089514066496	23	0	0.5115089514066496	23	0	NA	NA	NA	0.43541364296081275	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013946	Chromosome_6A	2303	6	38	38.86235345201911	0.440619084061707	0.8547008547008547	18	0	0	7	0	1.5228426395939085	11	0	0.3740648379052369	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013947	Chromosome_6A	4716	6	75	36.959287531806616	0.4656974401782211	13.429438543247345	66	0	18.63431715857929	26	0	11.163145284251797	40	0	7.329165768484587	22	0	sparse (10-50%)	P53624	Mannosyl-oligosaccharide alpha-1,2-mannosidase IA (EC 3.2.1.113) (Man(9)-alpha-mannosidase) (Mannosidase-1)	carbohydrate metabolic process [GO:0005975]; ERAD pathway [GO:0036503]; Golgi apparatus N-glycan mannose trimming [GO:1904381]	hit with GO BP
GN013948	Chromosome_6A	156	1	1	46.794871794871796	0.11890243902439024	4.651162790697675	1	0	4.651162790697675	1	0	NA	NA	NA	0.8770161290322581	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013949	Chromosome_6A	516	1	14	39.14728682170543	0.7138339920948616	1.7142857142857142	13	0	1.7142857142857142	13	0	NA	NA	NA	0.819672131147541	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013950	Chromosome_6A	1056	1	15	39.96212121212121	0.3575943651797002	NA	0	NA	NA	NA	NA	NA	NA	NA	1.348314606741573	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013951	Chromosome_6A	1042	3	8	30.42226487523992	0.33746255363938144	2.985074626865672	4	0	3.3333333333333335	1	0	2.7027027027027026	3	0	10.92436974789916	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013952	Chromosome_6A	264	1	12	45.07575757575758	0.9056603773584906	1.109350237717908	12	0	1.109350237717908	12	0	NA	NA	NA	0.4940014114326041	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013953	Chromosome_6A	1194	1	24	37.77219430485762	0.5747522965221228	0.8158508158508159	24	0	0.8158508158508159	24	0	NA	NA	NA	0.7954545454545454	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020806	Chromosome_6A	828	2	18	35.02415458937198	0.7116119174942704	0.23952095808383234	18	0	0.18450184501845018	13	0	0.3412969283276451	5	0	1.592039800995025	71	0	unmethylated (<10%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN004698	Chromosome_6A	867	1	34	38.17762399077278	1.0805718475073314	0.3787878787878788	34	0	0.3787878787878788	34	0	NA	NA	NA	0.4345127250155183	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000977	Chromosome_6A	288	1	5	37.84722222222222	0.5034965034965035	0	2	0	0	2	0	NA	NA	NA	0.6097560975609756	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000976	Chromosome_6A	538	2	22	45.16728624535316	0.815039250791902	4.100946372239748	15	0	3.900709219858156	13	0	5.714285714285714	2	0	1.245136186770428	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013954	Chromosome_6A	28680	7	707	35.67991631799163	0.7748369773686229	0.5562766549230483	698	0	0.4672897196261682	99	0	0.5670179605165504	599	0	2.455048409405256	54	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN013955	Chromosome_6A	393	1	16	44.020356234096695	0.8438003220611916	0.21231422505307856	16	0	0.21231422505307856	16	0	NA	NA	NA	0.6911217437533227	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013956	Chromosome_6A	1228	4	26	36.97068403908795	0.6203827844165938	91.015625	26	1	91.09311740890688	25	1	88.88888888888889	1	1	17.2746457642448	84	0.23809523809523808	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001359	Chromosome_6A	210	1	9	40.95238095238095	1.0221741481882098	95.45454545454545	3	1	95.45454545454545	3	1	NA	NA	NA	66.28276409849087	34	0.8823529411764706	NA	NA	NA	NA	no Swiss-Prot hit
GN013957	Chromosome_6A	1773	4	48	32.54371122391427	1.0224913494809689	0.5301022340022719	48	0	1.2738853503184713	14	0	0.3686635944700461	34	0	1.7883755588673622	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013958	Chromosome_6A	2465	4	63	34.9290060851927	0.850102365911604	1.2558869701726845	63	0	1.2669287898645696	48	0	1.2276785714285714	15	0	3.0683403068340307	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013959	Chromosome_6A	261	1	12	57.47126436781609	0.5690406976744186	1.6	11	0	1.6	11	0	NA	NA	NA	0.9062075215224287	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013960	Chromosome_6A	1049	2	26	38.41754051477598	0.6752327193503664	0.7874015748031497	26	0	0.8962868117797695	21	0	0.5524861878453039	5	0	0.6900517538815412	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013961	Chromosome_6A	1565	2	24	37.82747603833866	0.4290855086536814	0.27548209366391185	24	0	0	17	0	0.7017543859649122	7	0	0.3770028275212064	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013962	Chromosome_6A	486	1	23	45.06172839506173	0.939327731092437	1.8083182640144666	23	0	1.8083182640144666	23	0	NA	NA	NA	0.5003706449221645	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013963	Chromosome_6A	12810	7	180	36.69008587041374	0.4177328292567334	90.87419298551737	180	0.9666666666666667	96.11021069692059	14	1	90.57630244352237	166	0.963855421686747	80.31203566121843	22	0.6818181818181818	methylated (>=50%)	Q8BJZ4	Small ribosomal subunit protein mS35 (28S ribosomal protein S35, mitochondrial) (MRP-S35) (S35mt)	mitochondrial translation [GO:0032543]	hit with GO BP
GN013964	Chromosome_6A	1986	1	84	39.47633434038268	1.0976490791733287	1.2328767123287672	30	0	1.2328767123287672	30	0	NA	NA	NA	3.036876355748373	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013965	Chromosome_6A	1680	1	72	37.32142857142857	1.2345880623826244	0.40768782760629	51	0	0.40768782760629	51	0	NA	NA	NA	0.9448223733938019	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013966	Chromosome_6A	396	1	20	49.74747474747475	0.8173374613003096	1.1111111111111112	20	0	1.1111111111111112	20	0	NA	NA	NA	0.8469259723964868	58	0	unmethylated (<10%)	X6R8D5	Ciliary microtubule inner protein 3 (GUCA1A neighbor)	NA	hit, no GO BP
GN013967	Chromosome_6A	44348	30	775	37.277893027870476	0.5061785619446098	87.098957955562	759	0.9762845849802372	92.27941176470588	136	1	86.12809691958775	623	0.971107544141252	89.68105065666042	45	1	methylated (>=50%)	Q9I8D1	Unconventional myosin-VI (Unconventional myosin-6)	actin filament-based movement [GO:0030048]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; endocytosis [GO:0006897]; inner ear auditory receptor cell differentiation [GO:0042491]; inner ear morphogenesis [GO:0042472]; intracellular protein transport [GO:0006886]; regulation of secretion [GO:0051046]	hit with GO BP
GN013968	Chromosome_6A	216	1	18	59.72222222222222	0.9359653346172364	0.8	18	0	0.8	18	0	NA	NA	NA	0.9537434430138293	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013969	Chromosome_6A	19184	18	504	37.42702251876564	0.7503825938149371	0.7628074926653126	456	0	0.6248437890527369	83	0	0.7932136168337557	373	0	0.5662020905923345	45	0	unmethylated (<10%)	Q60610	Rho guanine nucleotide exchange factor TIAM1 (T-lymphoma invasion and metastasis-inducing protein 1) (TIAM-1)	activation of GTPase activity [GO:0090630]; brain-derived neurotrophic factor receptor signaling pathway [GO:0031547]; cardiac muscle hypertrophy [GO:0003300]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; ephrin receptor signaling pathway [GO:0048013]; neuron projection extension [GO:1990138]; non-canonical Wnt signaling pathway [GO:0035567]; positive regulation of axonogenesis [GO:0050772]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of JUN kinase activity [GO:0043507]; positive regulation of neuron projection development [GO:0010976]; positive regulation of Schwann cell chemotaxis [GO:1904268]; protein localization to membrane [GO:0072657]; protein-containing complex assembly [GO:0065003]; Rac protein signal transduction [GO:0016601]; regulation of dopaminergic neuron differentiation [GO:1904338]; regulation of epithelial to mesenchymal transition [GO:0010717]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of GTPase activity [GO:0043087]; regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0061178]; regulation of modification of postsynaptic actin cytoskeleton [GO:1905274]; regulation of postsynapse organization [GO:0099175]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN013970	Chromosome_6A	1001	3	43	37.96203796203796	1.2056862745098038	0.35122930255895635	43	0	0.3875968992248062	18	0	0.3281378178835111	25	0	0.5671902268760908	55	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013971	Chromosome_6A	7532	10	198	36.48433351035582	0.7902595823218859	0.619552661976268	198	0	0.7899461400359067	63	0	0.5491243692490353	135	0	0.6011163589523401	45	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013972	Chromosome_6A	14620	10	396	36.89466484268126	0.7963217065309846	1.718489568365998	392	0	0.572655690765927	58	0	1.937692571037316	334	0	0.7685738684884714	52	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013973	Chromosome_6A	1058	3	44	40.26465028355388	1.0266407904022583	0.36518563603164944	44	0	0.3937007874015748	21	0	0.340522133938706	23	0	0.2955301071296638	59	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013974	Chromosome_6A	11763	10	331	35.951712998384764	0.8710179462824024	0.5847308031774051	331	0	0.5761316872427984	73	0	0.5868949803217566	258	0	0	8	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013975	Chromosome_6A	18284	9	432	36.07525705534894	0.7266670763664438	0.5999647079583554	251	0	0.5040322580645161	89	0	0.65164268259571	162	0	0.1145475372279496	22	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN013976	Chromosome_6A	2488	4	29	34.646302250803856	0.3946074544012688	0.82930200414651	29	0	0.8283479061205706	21	0	0.8321775312066574	8	0	0.9764758100310696	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013977	Chromosome_6A	153	1	1	41.830065359477125	0.16558441558441558	0	1	0	0	1	0	NA	NA	NA	1.0763710917478215	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013978	Chromosome_6A	13021	7	294	36.64849089931649	0.6728612316667709	82.0264854504269	217	0.9354838709677419	76.89530685920577	5	1	82.15337916257477	212	0.9339622641509434	0.4835589941972921	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013979	Chromosome_6A	908	2	18	49.669603524229075	0.3219858156028369	0	4	0	0	4	0	NA	NA	NA	0.8706467661691543	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013980	Chromosome_6A	357	1	10	47.05882352941177	0.518367939596341	0.4807692307692308	10	0	0.4807692307692308	10	0	NA	NA	NA	0.2898550724637681	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013981	Chromosome_6A	156	1	5	50	0.5571428571428572	2.0408163265306123	4	0	2.0408163265306123	4	0	NA	NA	NA	0.3125	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN013982	Chromosome_6A	342	1	7	42.69005847953216	0.44932432432432434	0.8298755186721992	7	0	0.8298755186721992	7	0	NA	NA	NA	1.0747872816838333	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013983	Chromosome_6A	1515	3	38	37.755775577557756	0.7041340508806262	1.704966641957005	38	0	1.7801857585139318	37	0	0	1	0	1.737905119774542	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013984	Chromosome_6A	582	1	20	37.45704467353952	0.9880315762668704	0.7289595758780649	20	0	0.7289595758780649	20	0	NA	NA	NA	0.5568158383171788	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013985	Chromosome_6A	5622	5	136	36.32159373888296	0.7341842892904571	0.753113836052911	136	0	0.7401924500370096	19	0	0.7550521874306019	117	0	0.8487163165711861	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013986	Chromosome_6A	321	1	16	48.598130841121495	0.9324618736383442	0.2623294858342078	16	0	0.2623294858342078	16	0	NA	NA	NA	2.6180458158017763	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013987	Chromosome_6A	14622	7	268	35.47394337299959	0.5866485264084175	14.147399403586228	148	0	15.71152607855763	10	0	13.933524103015628	138	0	0.5909389363099147	71	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013988	Chromosome_6A	1278	1	45	40.84507042253521	0.847417667427982	1.466544454628781	42	0	1.466544454628781	42	0	NA	NA	NA	5.640050697084917	47	0	unmethylated (<10%)	P57436	Uncharacterized metal-dependent hydrolase BU355 (EC 3.1.-.-)	NA	hit, no GO BP
GN013989	Chromosome_6A	699	1	24	39.19885550786838	0.8950064020486556	10.43872919818457	24	0	10.43872919818457	24	0	NA	NA	NA	2.240325865580448	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013990	Chromosome_6A	1914	2	28	40.85684430512017	0.35060449050086356	4.578313253012048	18	0	6.474820143884892	11	0	0.7299270072992701	7	0	2.9238440616500454	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013991	Chromosome_6A	237	1	5	40.08438818565401	0.5266666666666666	0.26881720430107525	5	0	0.26881720430107525	5	0	NA	NA	NA	0.4674110620618021	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013992	Chromosome_6A	9262	11	281	38.242280285035626	0.8301832505740835	0.8537973654252724	280	0	0.5705229793977813	75	0	0.9515476320682489	205	0	0.583864118895966	36	0	unmethylated (<10%)	P18173	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	glucose metabolic process [GO:0006006]; pupal chitin-based cuticle development [GO:0008364]; sperm storage [GO:0046693]	hit with GO BP
GN013993	Chromosome_6A	612	1	11	48.03921568627451	0.3241525423728814	96.40287769784173	11	1	96.40287769784173	11	1	NA	NA	NA	40.734415029888986	24	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013994	Chromosome_6A	417	1	15	40.52757793764988	0.8767872161480236	0.4576659038901602	15	0	0.4576659038901602	15	0	NA	NA	NA	0.46565774155995343	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013995	Chromosome_6A	756	1	40	44.04761904761905	1.1003565970453388	0.9771986970684039	38	0	0.9771986970684039	38	0	NA	NA	NA	0.6382978723404256	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013996	Chromosome_6A	1137	1	52	41.86455584872471	1.0452769478280854	0.5266622778143516	52	0	0.5266622778143516	52	0	NA	NA	NA	0.6549568323905924	74	0	unmethylated (<10%)	Q9TUP7	Orexin receptor type 2 (Ox-2-R) (Ox2-R) (Ox2R) (Hypocretin receptor type 2)	cellular response to hormone stimulus [GO:0032870]; circadian sleep/wake cycle process [GO:0022410]; feeding behavior [GO:0007631]; glucose homeostasis [GO:0042593]; locomotion [GO:0040011]; neuropeptide signaling pathway [GO:0007218]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of cytosolic calcium ion concentration [GO:0051480]	hit with GO BP
GN013997	Chromosome_6A	960	1	42	42.916666666666664	0.9574468085106383	0.7368421052631579	42	0	0.7368421052631579	42	0	NA	NA	NA	1.1311475409836065	75	0	unmethylated (<10%)	Q9ESQ4	Neuromedin-U receptor 2 (NMU-R2) (G protein-coupled receptor FM-4) (FM-4) (G protein-coupled receptor TGR-1) (TGR-1)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; arachidonate secretion [GO:0050482]; G protein-coupled receptor signaling pathway [GO:0007186]; grooming behavior [GO:0007625]; neuropeptide signaling pathway [GO:0007218]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; reduction of food intake in response to dietary excess [GO:0002023]; regulation of sensory perception of pain [GO:0051930]; response to pain [GO:0048265]	hit with GO BP
GN013998	Chromosome_6A	3727	3	121	37.08076200697612	0.9445205422070306	0.8285163776493256	121	0	1.1378848728246318	51	0	0.7034632034632035	70	0	0.6505240332490061	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001221	Chromosome_6A	11472	5	173	36.41910739191074	0.4593412529622231	90.15124555160142	173	0.953757225433526	90.34171138096583	54	1	90.06364462917261	119	0.9327731092436975	4.801178203240059	50	0.02	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014000	Chromosome_6A	331	2	16	49.244712990936556	0.8135176651305683	94.9367088607595	16	1	95.28936742934052	15	1	89.36170212765957	1	1	95.5538520505941	56	1	methylated (>=50%)	Q0VC50	NAD(P)H oxidoreductase RTN4IP1, mitochondrial (EC 1.6.5.-) (Reticulon-4-interacting protein 1)	regulation of dendrite development [GO:0050773]; ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN014001	Chromosome_6A	1115	2	36	40.89686098654708	0.7739621695621156	1.056338028169014	36	0	1.422475106685633	16	0	0.697350069735007	20	0	0.4293073840870063	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014002	Chromosome_6A	3260	3	53	33.282208588957054	0.5902044776017434	0.7692307692307693	51	0	0.6009615384615384	18	0	0.8271298593879239	33	0	0.45662100456621	29	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014003	Chromosome_6A	11864	6	239	35.73836817262306	0.6312898926015302	3.378602186154356	207	0	3.470031545741325	52	0	3.3542976939203353	155	0	0.6163328197226502	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014004	Chromosome_6A	16899	9	253	36.179655600923134	0.4610964276689758	80.06119645310353	252	0.8968253968253969	88.96551724137932	55	0.9818181818181818	78.21102647258466	197	0.8730964467005076	30.575539568345324	19	0.15789473684210525	methylated (>=50%)	Q865V0	Centrosomal protein of 57 kDa (Cep57) (Testis-specific protein 57) (Translokin)	fibroblast growth factor receptor signaling pathway [GO:0008543]	hit with GO BP
GN014005	Chromosome_6A	408	2	18	41.911764705882355	1.0485436893203883	0.5192107995846313	18	0	0.43352601156069365	14	0	0.7380073800738007	4	0	0.35443037974683544	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014006	Chromosome_6A	2693	9	71	36.27924248050501	0.8012865644120358	0.6698297516048004	71	0	1.0033444816053512	16	0	0.5584512285927029	55	0	0.8384572386808273	31	0	unmethylated (<10%)	P80022	Extracellular ribonuclease LE (RNase LE) (EC 4.6.1.19)	NA	hit, no GO BP
GN014007	Chromosome_6A	1115	3	29	34.26008968609865	0.8863760964912281	0.33489618218352313	29	0	0.3629764065335753	10	0	0.3184713375796178	19	0	0.5159958720330238	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014008	Chromosome_6A	2438	2	98	39.909762100082034	1.011446956227246	0.6534569983136593	98	0	0.7852193995381063	62	0	0.5428460643660333	36	0	0.5434782608695652	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014009	Chromosome_6A	2058	5	65	40.62196307094266	0.7667308618199326	35.82566973210716	65	0.35384615384615387	51.65094339622642	32	0.5625	19.446704637917005	33	0.15151515151515152	0.5896805896805897	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN002092	Chromosome_6A	1250	1	43	53.12	0.4897940586841626	87.68248175182482	31	1	87.68248175182482	31	1	NA	NA	NA	84.03593642017968	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014010	Chromosome_6A	485	2	9	37.52577319587629	0.5335533553355336	79.08351810790835	9	0.8888888888888888	69.62962962962963	3	0.6666666666666666	81.4404432132964	6	1	63.522012578616355	40	0.825	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014011	Chromosome_6A	12346	7	355	34.89389275878827	0.9585999130380769	1.0045561837843773	354	0	0.5824535857298871	67	0	1.07950872656755	287	0	0.37678975131876413	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014012	Chromosome_6A	2737	4	83	39.64194373401534	0.7722964473907871	96.34831460674157	83	1	96.32352941176471	57	1	96.4	26	1	93.25842696629213	42	0.9761904761904762	methylated (>=50%)	P24463	Cytochrome P450 3A12 (EC 1.14.14.1) (CYPIIIA12) (Cytochrome P450-PBD-1)	hormone metabolic process [GO:0042445]; oxidative demethylation [GO:0070989]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN014013	Chromosome_6A	978	1	48	46.625766871165645	0.9047876031146403	1.015228426395939	47	0	1.015228426395939	47	0	NA	NA	NA	4.934541792547835	50	0	unmethylated (<10%)	Q9RAH6	Isonocardicin synthase (EC 2.5.1.38) (Nocardicin 3-amino-3-carboxypropyltransferase)	NA	hit, no GO BP
GN014014	Chromosome_6A	207	1	15	52.65700483091788	1.1815068493150684	0.6451612903225806	15	0	0.6451612903225806	15	0	NA	NA	NA	0.594732370433305	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014015	Chromosome_6A	56449	30	949	36.9182802175415	0.49343924163367375	88.9543078377848	920	0.9641304347826087	92.13579716373012	109	0.9724770642201835	88.66621266660181	811	0.9630086313193588	62.39467849223947	32	0.5	methylated (>=50%)	Q9NW08	DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (EC 2.7.7.6) (C128) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (DNA-directed RNA polymerase III subunit B)	DNA-templated transcription elongation [GO:0006354]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; snRNA transcription by RNA polymerase III [GO:0042796]; termination of RNA polymerase III transcription [GO:0006386]; transcription by RNA polymerase III [GO:0006383]; transcription initiation at RNA polymerase III promoter [GO:0006384]	hit with GO BP
GN014016	Chromosome_6A	15102	13	295	38.80280757515561	0.5253290138128671	92.4502367255511	293	0.9863481228668942	92.92299349240781	58	0.9482758620689655	92.34095894703854	235	0.9957446808510638	55.254016500217105	67	0.5223880597014925	methylated (>=50%)	Q640M1	U3 small nucleolar RNA-associated protein 14 homolog A (Juvenile spermatogonial depletion-like X-linked protein) (Jsd-like X-linked protein)	protein localization to nucleolus [GO:1902570]; rRNA processing [GO:0006364]	hit with GO BP
GN014017	Chromosome_6A	2508	1	79	45.933014354066984	0.5974039287814145	89.18367346938776	79	0.9873417721518988	89.18367346938776	79	0.9873417721518988	NA	NA	NA	17.47930082796688	35	0.17142857142857143	methylated (>=50%)	Q9BWV7	Probable tubulin polyglutamylase TTLL2 (EC 6.-.-.-) (Testis-specific protein NYD-TSPG) (Tubulin--tyrosine ligase-like protein 2)	microtubule cytoskeleton organization [GO:0000226]	hit with GO BP
GN014018	Chromosome_6A	15308	14	233	35.83747060360596	0.4811827815554092	82.3701709943002	227	0.9559471365638766	88.0773786024477	51	0.9803921568627451	80.93870680265373	176	0.9488636363636364	55.65312843029638	25	0.72	methylated (>=50%)	Q9D572	UBX domain-containing protein 11 (Socius) (UBX domain-containing protein 5)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN014019	Chromosome_6A	7955	6	185	33.702074167190446	0.8195011966691502	0.6802721088435374	179	0	1.1820330969267139	23	0	0.6096885046003769	156	0	0.47343503419253025	51	0	unmethylated (<10%)	Q6V0K7	Oncoprotein-induced transcript 3 protein (Liver-specific zona pellucida domain-containing protein)	renal system process [GO:0003014]	hit with GO BP
GN014020	Chromosome_6A	4799	10	109	34.38216295061471	0.7687992357436801	0.674240325113143	105	0	0.5955107650022904	43	0	0.727441572511995	62	0	0.584966364434045	52	0	unmethylated (<10%)	P19218	Pancreatic secretory granule membrane major glycoprotein GP2 (Glycoprotein 80) (gp80) (Pancreatic zymogen granule membrane protein GP-2)	antigen transcytosis by M cells in mucosal-associated lymphoid tissue [GO:0002412]; neutrophil migration [GO:1990266]	hit with GO BP
GN014021	Chromosome_6A	562	2	15	40.74733096085409	0.6484615384615384	0.7380073800738007	15	0	0.7380073800738007	15	0	NA	NA	NA	0.22189349112426035	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014022	Chromosome_6A	357	1	15	40.61624649859944	1.0227272727272727	1.1182108626198084	15	0	1.1182108626198084	15	0	NA	NA	NA	0.5035669324381032	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014023	Chromosome_6A	171	1	9	60.23391812865497	0.5928351309707242	0.970873786407767	9	0	0.970873786407767	9	0	NA	NA	NA	0.4116222760290557	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014024	Chromosome_6A	32895	10	172	32.181182550539596	0.20344515624235904	0.5379557680812911	130	0	0.794912559618442	41	0	0.4520074448285031	89	0	0.795311845960653	50	0	unmethylated (<10%)	Q862Z3	Uromodulin (Tamm-Horsfall urinary glycoprotein) (THP) [Cleaved into: Uromodulin, secreted form]	antibacterial innate immune response [GO:0140367]; defense response to Gram-negative bacterium [GO:0050829]; neutrophil migration [GO:1990266]	hit with GO BP
GN014025	Chromosome_6A	4108	7	30	32.1080817916261	0.2844218786060466	3.2142857142857144	20	0	5.405405405405405	10	0	0.7575757575757576	10	0	2.4466423737636647	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014026	Chromosome_6A	8299	10	104	34.377635859742135	0.42745469385167634	2.7964785085447956	100	0	2.5179856115107913	24	0	2.8433151845130067	76	0	1.1764705882352942	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014027	Chromosome_6A	195	1	4	45.64102564102564	0.3951367781155015	0	4	0	0	4	0	NA	NA	NA	0.6828528072837633	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014028	Chromosome_6A	378	1	5	42.592592592592595	0.32142857142857145	0	5	0	0	5	0	NA	NA	NA	1.0940919037199124	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014029	Chromosome_6A	417	1	5	40.28776978417266	0.300648882480173	0.6211180124223602	5	0	0.6211180124223602	5	0	NA	NA	NA	0.5673758865248227	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014030	Chromosome_6A	441	1	21	45.80498866213152	0.9079411764705883	1.1538461538461537	21	0	1.1538461538461537	21	0	NA	NA	NA	0.5971634735008708	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014031	Chromosome_6A	3656	3	16	42.040481400437635	0.1093113474806216	1.8691588785046729	11	0	1.8691588785046729	11	0	NA	NA	NA	0.45385779122541603	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014032	Chromosome_6A	189	1	18	54.4973544973545	1.310477657935285	0	15	0	0	15	0	NA	NA	NA	57.13585090730751	18	0.8333333333333334	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014033	Chromosome_6A	324	1	15	42.901234567901234	1.0296610169491525	0.7054673721340388	15	0	0.7054673721340388	15	0	NA	NA	NA	2.3993144815766922	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014034	Chromosome_6A	3825	2	78	38.745098039215684	0.5433713611329661	91.70316301703163	77	0.974025974025974	93.11670160726764	56	0.9642857142857143	88.46153846153847	21	1	84.75822050290135	42	0.9285714285714286	methylated (>=50%)	Q8BTP0	GPI alpha-1,2-mannosyltransferase 4 (EC 2.4.1.-) (GPI mannosyltransferase IV) (GPI-MT-IV) (Phosphatidylinositol-glycan biosynthesis class Z protein) (PIG-Z)	GPI anchor biosynthetic process [GO:0006506]	hit with GO BP
GN014035	Chromosome_6A	8779	6	158	37.19102403462809	0.5204915972030953	85.82806277816819	154	0.935064935064935	89.7196261682243	15	1	85.54932641619948	139	0.9280575539568345	6.90537084398977	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014036	Chromosome_6A	168	1	3	45.833333333333336	0.3620689655172414	92.5	3	1	92.5	3	1	NA	NA	NA	93.82716049382717	44	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014037	Chromosome_6A	555	1	49	58.1981981981982	1.3442906574394464	3.727714748784441	28	0	3.727714748784441	28	0	NA	NA	NA	1.7880794701986755	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014038	Chromosome_6A	936	1	57	49.03846153846154	1.0246207028999423	0.6660323501427212	46	0	0.6660323501427212	46	0	NA	NA	NA	1.4880952380952381	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014039	Chromosome_6A	657	1	41	48.09741248097413	1.0833735521235521	0.4508566275924256	41	0	0.4508566275924256	41	0	NA	NA	NA	0.6637806637806638	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014040	Chromosome_6A	1778	3	86	44.938132733408324	0.9581902494046873	0.5454545454545454	84	0	0.56	57	0	0.5263157894736842	27	0	0.5748961992973491	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014041	Chromosome_6A	9495	6	198	34.207477619799896	0.7153331608425667	1.7370892018779343	198	0	1.277740416946873	40	0	1.834210152139912	158	0	3.7735849056603774	34	0	unmethylated (<10%)	Q7KN92	Beta1,4-N-acetylgalactosaminyltransferase A (dmGalT) (EC 2.4.1.244) (UDP-GalNAc:betaGlcNAc beta-1,4GalNAc-transferase)	arthro-series glucosylceramide biosynthetic process [GO:0140269]; carbohydrate metabolic process [GO:0005975]; glycosphingolipid biosynthetic process [GO:0006688]; Golgi apparatus N-glycan diversification [GO:0016258]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN014042	Chromosome_6A	345	1	17	49.27536231884058	0.8118770764119602	1.0050251256281406	17	0	1.0050251256281406	17	0	NA	NA	NA	3.398470688190314	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014043	Chromosome_6A	480	1	14	46.875	0.5426356589147286	0.7759456838021338	14	0	0.7759456838021338	14	0	NA	NA	NA	0.6350550381033023	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014044	Chromosome_6A	4143	3	113	37.00217233888487	0.7970481777971486	0.5089058524173028	112	0	0.42134831460674155	23	0	0.5230839208551284	89	0	0.9355883411299029	55	0	unmethylated (<10%)	Q5PQZ7	Popeye domain-containing protein 1 (Popeye protein 1) (Blood vessel epicardial substance) (BVES) (hBVES)	bicellular tight junction assembly [GO:0070830]; cell-cell junction organization [GO:0045216]; epiboly [GO:0090504]; epithelial cell-cell adhesion [GO:0090136]; epithelium development [GO:0060429]; establishment of skin barrier [GO:0061436]; eye photoreceptor cell development [GO:0042462]; heart contraction [GO:0060047]; heart development [GO:0007507]; heart looping [GO:0001947]; outflow tract morphogenesis [GO:0003151]; positive regulation of locomotion [GO:0040017]; positive regulation of receptor recycling [GO:0001921]; regulation of cardiac muscle cell action potential [GO:0098901]; regulation of cell shape [GO:0008360]; regulation of GTPase activity [GO:0043087]; regulation of membrane potential [GO:0042391]; response to ischemia [GO:0002931]; retina development in camera-type eye [GO:0060041]; retina layer formation [GO:0010842]; skeletal muscle tissue development [GO:0007519]; skeletal myofibril assembly [GO:0014866]; striated muscle cell differentiation [GO:0051146]; substrate adhesion-dependent cell spreading [GO:0034446]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN014045	Chromosome_6A	3409	4	100	38.39835728952772	0.87116740009302	0.5770340450086555	100	0	0.5540734660373486	67	0	0.6313744536182613	33	0	2.470611675632596	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014046	Chromosome_6A	33648	15	669	37.508915834522114	0.5655941643869209	3.957355328390295	525	0.0419047619047619	18.392857142857142	68	0.20588235294117646	2.384080182941663	457	0.0175054704595186	0.42689434364994666	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002783	Chromosome_6A	294	1	3	34.35374149659864	0.393048128342246	0.42643923240938164	3	0	0.42643923240938164	3	0	NA	NA	NA	0.6261510128913443	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014047	Chromosome_6A	25763	25	362	36.401040251523504	0.427144560920113	88.2426072284877	358	0.9720670391061452	92.45393963151706	95	1	87.00918484500573	263	0.9619771863117871	84.44735692442114	50	1	methylated (>=50%)	Q6NRS1	Inhibitor of Bruton tyrosine kinase (IBtk)	release of sequestered calcium ion into cytosol [GO:0051209]	hit with GO BP
GN014048	Chromosome_6A	1079	3	38	40.037071362372565	0.8794937794937795	0.3380662609871535	38	0	0.28846153846153844	30	0	0.45558086560364464	8	0	0.23277467411545624	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014049	Chromosome_6A	3120	4	88	36.57051282051282	0.8455440787893346	0.463980463980464	88	0	0.4623513870541612	42	0	0.4649360712901976	46	0	0.693107431651906	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014050	Chromosome_6A	261	1	12	40.61302681992337	1.2428571428571429	95.96879063719116	12	1	95.96879063719116	12	1	NA	NA	NA	95.47062986553432	63	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014051	Chromosome_6A	19308	11	238	37.20737518127201	0.35674646390213044	85.74338085539715	226	0.9646017699115044	92.51980982567353	80	1	83.26573183451153	146	0.9452054794520548	60.592592592592595	11	0.6363636363636364	methylated (>=50%)	Q13490	Baculoviral IAP repeat-containing protein 2 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 1) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (hIAP-2) (hIAP2) (RING finger protein 48) (RING-type E3 ubiquitin transferase BIRC2) (TNFR2-TRAF-signaling complex protein 2)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; necroptotic process [GO:0070266]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein K48-linked ubiquitination [GO:1902524]; positive regulation of protein K63-linked ubiquitination [GO:1902523]; positive regulation of protein monoubiquitination [GO:1902527]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; response to bleomycin [GO:1904975]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN014052	Chromosome_6A	477	1	4	47.37945492662474	0.20287081339712917	86.25	4	1	86.25	4	1	NA	NA	NA	93.65367180417044	30	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014053	Chromosome_6A	14597	10	362	36.25402479961636	0.7549904520915027	0.8100310696848646	362	0	0.8951661030435647	105	0	0.7771024082480572	257	0	1.0596546310832025	61	0	unmethylated (<10%)	Q13490	Baculoviral IAP repeat-containing protein 2 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 1) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (hIAP-2) (hIAP2) (RING finger protein 48) (RING-type E3 ubiquitin transferase BIRC2) (TNFR2-TRAF-signaling complex protein 2)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; necroptotic process [GO:0070266]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein K48-linked ubiquitination [GO:1902524]; positive regulation of protein K63-linked ubiquitination [GO:1902523]; positive regulation of protein monoubiquitination [GO:1902527]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; response to bleomycin [GO:1904975]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN014054	Chromosome_6A	12917	4	369	38.04288921576217	0.7944997118788748	0.5274132221268245	362	0	0.5957836846929423	65	0	0.5168507504956104	297	0	0.47477744807121663	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014055	Chromosome_6A	483	1	36	55.6935817805383	0.9914471433458775	1.125703564727955	36	0	1.125703564727955	36	0	NA	NA	NA	0.5394190871369294	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014056	Chromosome_6A	7865	8	213	36.4907819453274	0.8150532674963912	0.8204900765051558	212	0	0.6151480199923106	70	0	0.9037083203490184	142	0	1.0172626387176325	63	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN014057	Chromosome_6A	1253	2	41	41.50039904229848	0.7670474057484136	0.6690997566909975	41	0	0.5287009063444109	35	0	1.25	6	0	0.70838252656434475	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014058	Chromosome_6A	552	1	14	42.391304347826086	0.5665689149560117	0.6134969325153374	14	0	0.6134969325153374	14	0	NA	NA	NA	1.7332549941245594	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014059	Chromosome_6A	813	1	19	42.189421894218945	0.5251937984496124	96.11398963730569	19	1	96.11398963730569	19	1	NA	NA	NA	73.10924369747899	35	0.9428571428571428	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014060	Chromosome_6A	39949	44	580	37.52284162306941	0.41458868368045515	86.50043526924512	574	0.9355400696864111	93.46287768168034	208	0.9903846153846154	83.83560466016078	366	0.9043715846994536	79.98819362455725	27	0.9629629629629629	methylated (>=50%)	Q03460	Glutamate synthase [NADH], amyloplastic (EC 1.4.1.14) (NADH-GOGAT)	ammonia assimilation cycle [GO:0019676]; developmental growth [GO:0048589]; L-glutamate biosynthetic process [GO:0097054]	hit with GO BP
GN014061	Chromosome_6A	2022	1	50	40.25717111770524	0.611804004865385	0.6475984889368591	50	0	0.6475984889368591	50	0	NA	NA	NA	0.5473277527366388	43	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014062	Chromosome_6A	1978	3	52	41.40546006066734	0.6140363445327984	1.1627906976744187	41	0	1.03397341211226	40	0	9.090909090909092	1	0	0.35335689045936397	50	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014063	Chromosome_6A	23915	6	278	36.56282667781727	0.34927338577746303	70.12937883029431	271	0.7785977859778598	87.72018117765475	54	0.9629629629629629	67.01691896705253	217	0.7327188940092166	62.67605633802817	20	0.85	methylated (>=50%)	P91621	Protein still life, isoform SIF type 1	actin cytoskeleton organization [GO:0030036]; eye development [GO:0001654]; positive regulation of axonogenesis [GO:0050772]; positive regulation of filopodium assembly [GO:0051491]; regulation of axonogenesis [GO:0050770]; regulation of synapse structure or activity [GO:0050803]; small GTPase-mediated signal transduction [GO:0007264]; visual perception [GO:0007601]	hit with GO BP
GN014064	Chromosome_6A	22951	13	688	37.12256546555706	0.8704103366921703	0.7145131053022532	648	0	0.7151370679380215	88	0	0.7144521239419119	560	0	0.6585612968591692	70	0	unmethylated (<10%)	P70057	Potassium voltage-gated channel subfamily KQT member 1 (IKs producing slow voltage-gated potassium channel subunit alpha xKvLQT1) (KQT-like 1) (Voltage-gated potassium channel subunit Kv7.1)	inner ear development [GO:0048839]; intestinal absorption [GO:0050892]; membrane repolarization [GO:0086009]; potassium ion transmembrane transport [GO:0071805]; regulation of gastric acid secretion [GO:0060453]; renal absorption [GO:0070293]	hit with GO BP
GN014065	Chromosome_6A	1359	1	49	43.340691685062545	0.7711754487550666	66.66666666666667	49	0.5306122448979592	66.66666666666667	49	0.5306122448979592	NA	NA	NA	19.08450704225352	20	0.2	methylated (>=50%)	Q4PJX1	Protein odr-4 homolog (mODR-4)	intracellular protein localization [GO:0008104]	hit with GO BP
GN014066	Chromosome_6A	37948	15	763	36.66596395066934	0.59951600711982	88.03769041996574	746	0.9477211796246648	96.8828320802005	157	0.9936305732484076	86.50366748166259	589	0.9354838709677419	96.33086578693273	44	1	methylated (>=50%)	Q52KI8	Serine/arginine repetitive matrix protein 1 (Plenty-of-prolines 101)	mRNA splicing, via spliceosome [GO:0000398]; regulation of mRNA splicing, via spliceosome [GO:0048024]; RNA splicing, via transesterification reactions [GO:0000375]	hit with GO BP
GN014067	Chromosome_6A	1586	3	35	36.75914249684742	0.6546762589928058	80.06272401433692	30	0.9333333333333333	82.06371191135734	23	0.9130434782608695	76.39593908629442	7	1	82.58726899383984	37	0.972972972972973	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014068	Chromosome_6A	19698	7	549	36.15595491928114	0.8531749879390892	3.795275590551181	538	0.01486988847583643	0.7795404814004376	89	0	4.697602095097799	449	0.017817371937639197	5.607476635514018	43	0.023255813953488372	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN018692	Chromosome_6A	3762	10	35	32.45614035087719	0.35461508629047894	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014069	Chromosome_6A	19263	16	222	39.44349270622437	0.2977643577737787	78.03760282021152	215	0.8744186046511628	83.00929839391378	34	0.9117647058823529	77.23488467312679	181	0.8674033149171271	84.22436459246275	20	0.9	methylated (>=50%)	Q93099	Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisate oxygenase) (Homogentisic acid oxidase) (Homogentisicase)	L-phenylalanine catabolic process [GO:0006559]; L-tyrosine catabolic process [GO:0006572]	hit with GO BP
GN014070	Chromosome_6A	894	1	25	39.038031319910516	0.7463932674325408	0.48484848484848486	25	0	0.48484848484848486	25	0	NA	NA	NA	0.8519388954171563	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014071	Chromosome_6A	534	1	26	43.258426966292134	1.0530946601941749	0.6339144215530903	25	0	0.6339144215530903	25	0	NA	NA	NA	0.4445484323818437	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014072	Chromosome_6A	1631	2	79	40.711220110361744	1.1705032703488372	0.6381934216985763	77	0	0.43266630611141155	66	0	2.6595744680851063	11	0	0.48887802493277926	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014073	Chromosome_6A	1533	1	58	42.987606001304634	0.8235065295915532	0.4816955684007707	58	0	0.4816955684007707	58	0	NA	NA	NA	0.49641478212906787	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014074	Chromosome_6A	1659	2	95	44.84629294755877	1.141568883094307	0.6566347469220246	95	0	0.625	88	0	0.8791208791208791	7	0	0.9615384615384616	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014075	Chromosome_6A	183	1	6	49.18032786885246	0.5432953983176645	1.098901098901099	6	0	1.098901098901099	6	0	NA	NA	NA	0.7343550446998723	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014076	Chromosome_6A	423	1	21	46.09929078014184	0.9364326375711575	0.704225352112676	21	0	0.704225352112676	21	0	NA	NA	NA	0.5655042412818096	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014077	Chromosome_6A	5713	5	93	40.64414493260984	0.4024970606773169	30.287590579710145	89	0.0449438202247191	36.97205977907732	20	0	28.877005347593585	69	0.057971014492753624	9.499358151476251	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014078	Chromosome_6A	2857	4	30	33.00665033251663	0.39435543981374976	1.5031315240083507	30	0	2.455357142857143	11	0	0.933955970647098	19	0	0.981404958677686	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014079	Chromosome_6A	711	1	51	44.30379746835443	1.4617834394904459	0.4366812227074236	51	0	0.4366812227074236	51	0	NA	NA	NA	0.5058168942842691	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014080	Chromosome_6A	291	1	21	54.982817869415804	0.9561883899233297	0.7259528130671506	21	0	0.7259528130671506	21	0	NA	NA	NA	0.4924592182209911	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014081	Chromosome_6A	432	1	19	43.98148148148148	0.9144385026737968	0.34965034965034963	19	0	0.34965034965034963	19	0	NA	NA	NA	0.398406374501992	98	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN014082	Chromosome_6A	525	1	25	41.142857142857146	1.1473905061631262	0.6060606060606061	25	0	0.6060606060606061	25	0	NA	NA	NA	1.1059907834101383	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014083	Chromosome_6A	276	1	10	39.85507246376812	1.0360360360360361	1.183431952662722	10	0	1.183431952662722	10	0	NA	NA	NA	0.54421768707483	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014084	Chromosome_6A	995	2	5	32.462311557788944	0.19189230887911748	7.6923076923076925	1	0	NA	NA	NA	7.6923076923076925	1	0	8.411214953271028	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014085	Chromosome_6A	561	2	11	44.919786096256686	0.41374455246396247	5.384615384615385	9	0	5.882352941176471	8	0	4.109589041095891	1	0	1.0318949343339587	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014086	Chromosome_6A	3231	4	78	38.81151346332405	0.6411888624290163	0.8298755186721992	31	0	0.7648183556405354	18	0	1	13	0	3.10077519379845	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014087	Chromosome_6A	388	2	15	39.94845360824742	1.0497835497835497	0.1631321370309951	15	0	0.17064846416382254	14	0	0	1	0	0.43497172683775553	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014088	Chromosome_6A	563	2	11	44.93783303730018	0.4092651334919376	3.4188034188034186	10	0	3.581267217630854	9	0	2.857142857142857	1	0	1.0096153846153846	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014089	Chromosome_6A	3231	4	78	38.78056329309811	0.6422968116828504	0.3434065934065934	38	0	0.4042037186742118	24	0	0	14	0	3.8135593220338984	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014090	Chromosome_6A	856	2	18	35.16355140186916	0.7362385321100917	2.1071115013169446	18	0	2.2408963585434174	8	0	2.0460358056265986	10	0	0.3624830086089715	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014091	Chromosome_6A	787	2	13	43.83735705209657	0.3482775054466231	0.27739251040221913	13	0	0.3125	12	0	0	1	0	1.2583271650629164	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014092	Chromosome_6A	4234	3	101	36.41946150212565	0.7239199620801734	0.723258469737343	101	0	0.7077856420626896	45	0	0.7326007326007326	56	0	1.0813148788927336	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011621	Chromosome_6A	540	1	5	34.81481481481482	0.30612244897959184	21.14695340501792	5	0	21.14695340501792	5	0	NA	NA	NA	29.811715481171547	21	0.42857142857142855	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014093	Chromosome_6A	8329	4	133	36.1387921719294	0.48995656210345395	68.90551592135027	132	0.7651515151515151	45.723014256619145	16	0.5625	71.07115677321157	116	0.7931034482758621	0.6601607347876005	40	0	methylated (>=50%)	O73770	Protein DGCR6 (DiGeorge syndrome critical region 6 homolog)	NA	hit, no GO BP
GN014094	Chromosome_6A	31459	5	617	36.161352871992115	0.60017695913521	75.4328112118714	541	0.8280961182994455	42.157373632100054	23	0.30434782608695654	76.7352683215371	518	0.8513513513513513	39.072494669509595	30	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014095	Chromosome_6A	192	1	7	46.354166666666664	0.6829268292682927	0.3588516746411483	7	0	0.3588516746411483	7	0	NA	NA	NA	0.579262405869859	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014096	Chromosome_6A	11712	6	164	35.37397540983606	0.45005454729494154	72.85396590066716	126	0.8412698412698413	87.3249299719888	36	0.9722222222222222	68.96746285499341	90	0.7888888888888889	23.863636363636363	25	0.04	methylated (>=50%)	O45782	Arrestin domain-containing protein 17 (Calcineurin-interacting protein 1)	NA	hit, no GO BP
GN014097	Chromosome_6A	881	2	30	38.25198637911464	0.9448734448734448	2.9374201787994894	30	0	3.527481542247744	24	0	0.8645533141210374	6	0	1.7272727272727273	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014098	Chromosome_6A	492	1	28	46.54471544715447	1.0580645161290323	1.2162162162162162	28	0	1.2162162162162162	28	0	NA	NA	NA	0.5102040816326531	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014099	Chromosome_6A	958	2	10	34.55114822546973	0.3569565541396527	0.6451612903225806	10	0	0.7122507122507122	9	0	0	1	0	0.603090840557859	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014100	Chromosome_6A	549	1	18	39.89071038251366	0.8280542986425339	0.49261083743842365	18	0	0.49261083743842365	18	0	NA	NA	NA	0.39119804400978	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014101	Chromosome_6A	303	1	7	39.93399339933993	0.6824324324324325	0.796812749003984	7	0	0.796812749003984	7	0	NA	NA	NA	0.3183023872679045	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001690	Chromosome_6A	495	1	10	44.84848484848485	0.4017857142857143	14.545454545454545	10	0	14.545454545454545	10	0	NA	NA	NA	8.864190837625372	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014102	Chromosome_6A	1644	1	43	38.19951338199513	0.7223272400298364	0.6464445549477872	43	0	0.6464445549477872	43	0	NA	NA	NA	0.4993757802746567	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014103	Chromosome_6A	690	1	17	38.69565217391305	0.6615159034513873	0.11655011655011654	17	0	0.11655011655011654	17	0	NA	NA	NA	0.3927729772191673	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014104	Chromosome_6A	1659	1	50	39.18022905364678	0.7935065432004286	0.8093889113719142	50	0	0.8093889113719142	50	0	NA	NA	NA	0.5884825556956704	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014105	Chromosome_6A	854	2	36	43.442622950819676	0.8963265306122449	0.7178750897343862	36	0	0.8718395815170009	32	0	0	4	0	0.580168776371308	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014106	Chromosome_6A	1659	1	47	39.96383363471971	0.7160055096418733	0.3894080996884735	47	0	0.3894080996884735	47	0	NA	NA	NA	0.4894578313253012	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014107	Chromosome_6A	339	1	19	45.13274336283186	1.1006493506493507	0.5357142857142857	19	0	0.5357142857142857	19	0	NA	NA	NA	0.5512679162072768	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014108	Chromosome_6A	273	1	4	38.095238095238095	0.41935483870967744	0.8620689655172413	4	0	0.8620689655172413	4	0	NA	NA	NA	3.4482758620689653	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014109	Chromosome_6A	6264	7	156	35.93550446998723	0.7722223012474929	0.6526253337288639	156	0	0.6910569105691057	79	0	0.6305464736104625	77	0	0.8567931456548348	62	0	unmethylated (<10%)	Q61045	Single-minded homolog 1 (mSIM1)	regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; ureteric bud development [GO:0001657]	hit with GO BP
GN014110	Chromosome_6A	12677	5	298	32.97310089137809	0.875172909237448	21.193208509496007	296	0.19932432432432431	4.140443855581318	94	0	25.526005722942266	202	0.29207920792079206	6.117108276087667	44	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014111	Chromosome_6A	1412	4	35	36.54390934844193	0.7473950062761823	0.7621121393576483	35	0	0.8081667375584858	24	0	0.6802721088435374	11	0	0.5006530256856769	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014112	Chromosome_6A	1269	3	35	37.825059101654844	0.773726569577033	0.6466337010270065	35	0	0.6899950714637753	29	0	0.5	6	0	0.3795066413662239	38	0	unmethylated (<10%)	A9ULZ2	Baculoviral IAP repeat-containing protein 7-B (EC 2.3.2.27) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B) (RING-type E3 ubiquitin transferase EIAP-B)	negative regulation of apoptotic process [GO:0043066]; positive regulation of protein ubiquitination [GO:0031398]; protein autoubiquitination [GO:0051865]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN014113	Chromosome_6A	276	1	1	42.028985507246375	0.08455882352941177	77.77777777777777	1	1	77.77777777777777	1	1	NA	NA	NA	39.95200959808039	34	0.6470588235294118	NA	NA	NA	NA	no Swiss-Prot hit
GN014114	Chromosome_6A	4098	3	26	31.210346510492922	0.26056971807563634	58.63760217983651	24	0.7916666666666666	60.45883940620783	10	0.9	57.40402193784278	14	0.7142857142857143	1.3261296660117878	44	0.022727272727272728	methylated (>=50%)	Q17QR8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN014115	Chromosome_6A	25901	8	337	35.535307517084284	0.41709126545706604	61.90575262665141	335	0.6388059701492538	72.96946068875893	36	0.7777777777777778	60.94306552835416	299	0.6220735785953178	0.6542056074766355	47	0	methylated (>=50%)	Q6IRN2	KH domain-containing RNA-binding protein qki.L (Protein quaking-B)	negative regulation of macrophage differentiation [GO:0045650]; regulation of astrocyte differentiation [GO:0048710]; regulation of mRNA splicing, via spliceosome [GO:0048024]; spliceosome-depend formation of circular RNA [GO:0160091]	hit with GO BP
GN014116	Chromosome_6A	1425	1	60	45.12280701754386	0.8464508464508465	0.24288688410825815	60	0	0.24288688410825815	60	0	NA	NA	NA	0.845608292416803	73	0	unmethylated (<10%)	Q7Z2Y8	Interferon-induced very large GTPase 1 (Interferon-induced very large GTPase pseudogene 1)	NA	hit, no GO BP
GN014117	Chromosome_6A	1014	2	25	38.46153846153846	0.6851166184697711	0.29261155815654716	25	0	0.2717391304347826	21	0	0.38022813688212925	4	0	1.2072434607645874	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014118	Chromosome_6A	4172	3	55	38.59060402684564	0.35710895200210413	31.57367190110257	55	0.41818181818181815	33.333333333333336	22	0.5	30.481862479696805	33	0.36363636363636365	91.6214587100663	50	1	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014119	Chromosome_6A	396	1	20	51.26262626262626	0.7729845793480382	0.6396588486140725	20	0	0.6396588486140725	20	0	NA	NA	NA	0.5389867049946101	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014120	Chromosome_6A	1359	1	34	41.280353200883	0.5962833914053426	1.5384615384615385	9	0	1.5384615384615385	9	0	NA	NA	NA	0.4158004158004158	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014121	Chromosome_6A	837	1	25	41.577060931899645	0.6912328224101479	0.625	25	0	0.625	25	0	NA	NA	NA	0.4557538928978352	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014122	Chromosome_6A	2730	4	72	32.82051282051282	1.0010797156069835	0.5319856363878175	66	0	0.5420054200542005	17	0	0.5287275290800141	49	0	0.33003300330033003	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014123	Chromosome_6A	14560	4	248	36.456043956043956	0.5141311016653646	86.83864017237252	246	0.9634146341463414	81.55080213903743	10	1	87.08646616541354	236	0.961864406779661	93.76991150442478	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014124	Chromosome_6A	10467	8	269	37.221744530428964	0.743470459859498	1.4673913043478262	267	0	2.1341463414634148	78	0	1.2079378774805867	189	0	1.4780600461893765	62	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN014125	Chromosome_6A	246	1	14	53.65853658536585	0.7913602941176471	7.407407407407407	14	0	7.407407407407407	14	0	NA	NA	NA	0.947075208913649	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014126	Chromosome_6A	390	1	16	41.282051282051285	0.9765258215962441	0.44025157232704404	16	0	0.44025157232704404	16	0	NA	NA	NA	0.6367924528301887	49	0	unmethylated (<10%)	Q9R0N7	Synaptotagmin-7 (Synaptotagmin VII) (SytVII)	calcium ion regulated lysosome exocytosis [GO:1990927]; calcium ion-regulated exocytosis of neurotransmitter [GO:0048791]; calcium-dependent activation of synaptic vesicle fusion [GO:0099502]; calcium-ion regulated exocytosis [GO:0017156]; insulin secretion [GO:0030073]; phagocytosis [GO:0006909]; phagosome-lysosome fusion [GO:0090385]; plasma membrane repair [GO:0001778]; positive regulation of calcium ion-dependent exocytosis [GO:0045956]; regulation of bone remodeling [GO:0046850]; regulation of calcium ion-dependent exocytosis [GO:0017158]; regulation of dopamine secretion [GO:0014059]; regulation of glucagon secretion [GO:0070092]; regulation of insulin secretion [GO:0050796]; regulation of phagocytosis [GO:0050764]; regulation of synaptic vesicle endocytosis [GO:1900242]; short-term synaptic potentiation [GO:1990926]; synaptic vesicle recycling [GO:0036465]; vesicle fusion [GO:0006906]; vesicle-mediated cholesterol transport [GO:0090119]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN014127	Chromosome_6A	32404	11	726	36.529440809776574	0.6718667481407025	1.9406191148775895	665	0	1.6233766233766234	125	0	2.0264712480370894	540	0	2.8843537414965987	49	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN014128	Chromosome_6A	1904	7	55	47.74159663865546	0.5069467976956964	NA	0	NA	NA	NA	NA	NA	NA	NA	0.2911679068262698	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014129	Chromosome_6A	12572	4	269	35.475660197263764	0.6807495945436455	1.7142526206057798	269	0	5.596919127086008	42	0	0.5833084056236914	227	0	1.9649495485926713	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014130	Chromosome_6A	19218	2	268	35.789364137787494	0.4384175366197471	71.71116234104261	267	0.7378277153558053	83.48794063079778	62	0.7258064516129032	70.10143702451394	205	0.7414634146341463	0.6339516318384597	72	0	methylated (>=50%)	B4JSC2	Forkhead box protein O	cellular response to oxidative stress [GO:0034599]; determination of adult lifespan [GO:0008340]; glucose homeostasis [GO:0042593]; insulin receptor signaling pathway [GO:0008286]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of insulin receptor signaling pathway [GO:0046627]; negative regulation of multicellular organism growth [GO:0040015]; positive regulation of catabolic process [GO:0009896]; positive regulation of defense response [GO:0031349]; positive regulation of immune response [GO:0050778]; regulation of DNA-templated transcription [GO:0006355]; regulation of lipid metabolic process [GO:0019216]; regulation of lipid storage [GO:0010883]; response to starvation [GO:0042594]	hit with GO BP
GN014131	Chromosome_6A	1336	3	33	43.038922155688624	0.5696124031007752	0.6469500924214417	31	0	0.6410256410256411	26	0	0.6622516556291391	5	0	0.5956813104988831	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014132	Chromosome_6A	929	2	3	41.442411194833156	0.115289153636138	0	3	0	0	3	0	NA	NA	NA	0.5859375	56	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014133	Chromosome_6A	55124	25	790	35.59792467890574	0.4523987241654463	73.24167649925614	616	0.8603896103896104	84.24175009269558	50	0.94	72.42415056904296	566	0.8533568904593639	37.45019920318725	16	0.0625	methylated (>=50%)	P32019	Type II inositol 1,4,5-trisphosphate 5-phosphatase (EC 3.1.3.36) (EC 3.1.3.56) (75 kDa inositol polyphosphate-5-phosphatase) (Phosphoinositide 5-phosphatase) (5PTase)	inositol phosphate metabolic process [GO:0043647]; phosphatidylinositol dephosphorylation [GO:0046856]; signal transduction [GO:0007165]	hit with GO BP
GN017470	Chromosome_6A	2286	3	37	30.35870516185477	0.713410931174089	43.08943089430894	6	0.16666666666666666	31.25	1	0	47.252747252747255	5	0.2	44.32773109243698	18	0.2777777777777778	sparse (10-50%)	A7MBH3	Nuclear apoptosis-inducing factor 1	negative regulation of cell growth [GO:0030308]; regulation of mitochondrial membrane permeability involved in apoptotic process [GO:1902108]	hit with GO BP
GN014134	Chromosome_6A	297	1	1	39.05723905723906	0.08924278846153846	0	1	0	0	1	0	NA	NA	NA	0.4230118443316413	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014135	Chromosome_6A	1335	1	36	38.27715355805243	0.7454861326549606	0.5348487380912585	32	0	0.5348487380912585	32	0	NA	NA	NA	0.9477490958972441	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014136	Chromosome_6A	474	1	11	44.72573839662447	0.47113038763892656	0.9910802775024777	11	0	0.9910802775024777	11	0	NA	NA	NA	1.0461245839277222	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014137	Chromosome_6A	351	1	14	41.88034188034188	0.9106745737583395	0.847457627118644	14	0	0.847457627118644	14	0	NA	NA	NA	0.5934718100890207	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014138	Chromosome_6A	24306	3	624	36.040483831152805	0.7905923386539573	6.479520757871273	618	0	14.318975552968569	31	0	6.18759302342384	587	0	9.377696806980534	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014139	Chromosome_6A	351	1	15	42.16524216524216	0.9658778205833792	0.2949852507374631	15	0	0.2949852507374631	15	0	NA	NA	NA	0.6389776357827476	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014140	Chromosome_6A	483	1	17	50.72463768115942	0.5599427168576104	0.78125	8	0	0.78125	8	0	NA	NA	NA	0	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014141	Chromosome_6A	2167	4	73	39.31702814951546	0.9027363255057494	25.3690036900369	43	0.11627906976744186	15.921052631578947	34	0.029411764705882353	47.53086419753087	9	0.4444444444444444	1.6194331983805668	29	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016448	Chromosome_6A	970	1	17	38.865979381443296	0.47922115664051146	0.7334963325183375	17	0	0.7334963325183375	17	0	NA	NA	NA	0.735632183908046	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014142	Chromosome_6A	1046	2	39	41.68260038240918	0.9539555222973131	0.8733624454148472	35	0	0.9142857142857143	34	0	0	1	0	33.9261894175189	55	0.2	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014143	Chromosome_6A	483	1	17	50.72463768115942	0.5599427168576104	0	7	0	0	7	0	NA	NA	NA	0.12453300124533001	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014144	Chromosome_6A	990	1	33	40.707070707070706	0.8139013452914798	0.8377760853008378	33	0	0.8377760853008378	33	0	NA	NA	NA	0.47723935389133626	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014145	Chromosome_6A	351	1	15	42.45014245014245	0.9496753246753247	0.9036144578313253	15	0	0.9036144578313253	15	0	NA	NA	NA	0.5128205128205128	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014146	Chromosome_6A	19952	6	556	37.264434643143545	0.8047365024536772	2.001197724323785	500	0	1.8934390136503743	74	0	2.0149715765182643	426	0	0.9523809523809523	13	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN014147	Chromosome_6A	351	1	17	42.45014245014245	1.0762987012987013	0	1	0	0	1	0	NA	NA	NA	0.5285412262156448	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003156	Chromosome_6A	1136	2	40	38.556338028169016	0.9494160172165228	0.6055363321799307	36	0	0.6055363321799307	36	0	NA	NA	NA	0.6040775232821546	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014148	Chromosome_6A	15907	12	205	32.72144338970265	0.4829083181542198	9.175155089224171	205	0	5.204460966542751	12	0	9.43673469387755	193	0	0.3292568203198495	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014149	Chromosome_6A	330	1	9	53.93939393939394	0.3831269349845201	0.6134969325153374	9	0	0.6134969325153374	9	0	NA	NA	NA	0.4839685420447671	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014150	Chromosome_6A	4300	4	39	34.30232558139535	0.31027745502179527	0.2418379685610641	31	0	0.32679738562091504	24	0	0	7	0	1.1342155009451795	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014151	Chromosome_6A	768	1	8	38.151041666666664	0.29450675870002874	0.4073319755600815	8	0	0.4073319755600815	8	0	NA	NA	NA	0.20202020202020202	28	0	unmethylated (<10%)	Q5UPX0	Putative ATP-dependent RNA helicase R290 (EC 3.6.4.13)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]	hit with GO BP
GN014152	Chromosome_6A	723	3	29	39.55739972337483	1.0693084455324358	0.5565862708719852	29	0	0.6451612903225806	26	0	0	3	0	0.8821170809943866	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014153	Chromosome_6A	12647	4	259	36.00063256108168	0.6403068634752709	0.6991108396117559	258	0	0.548159749412686	26	0	0.713436385255648	232	0	1.1131245146259383	56	0	unmethylated (<10%)	Q0VCJ7	Ras-related and estrogen-regulated growth inhibitor (EC 3.6.5.2)	establishment or maintenance of cell polarity [GO:0007163]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]	hit with GO BP
GN014154	Chromosome_6A	651	1	12	41.16743471582181	0.43986486486486487	87.24727838258165	12	1	87.24727838258165	12	1	NA	NA	NA	2.9636150234741785	45	0	methylated (>=50%)	A9ULZ2	Baculoviral IAP repeat-containing protein 7-B (EC 2.3.2.27) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B) (RING-type E3 ubiquitin transferase EIAP-B)	negative regulation of apoptotic process [GO:0043066]; positive regulation of protein ubiquitination [GO:0031398]; protein autoubiquitination [GO:0051865]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN014155	Chromosome_6A	981	2	29	40.46890927624872	0.7305855161787366	0.8935569838532685	28	0	0.8793761407001826	26	0	1.1363636363636365	2	0	0.9442870632672332	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014156	Chromosome_6A	522	1	20	42.72030651340996	0.8458920758385999	0.6809037449705974	17	0	0.6809037449705974	17	0	NA	NA	NA	0.6087735004476276	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014157	Chromosome_6A	615	1	22	41.951219512195124	0.822742474916388	0.779510022271715	22	0	0.779510022271715	22	0	NA	NA	NA	0.5736792533607329	89	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014158	Chromosome_6A	735	1	31	38.775510204081634	1.1797141969555762	0.3022860381636123	28	0	0.3022860381636123	28	0	NA	NA	NA	0.7296090602199717	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014159	Chromosome_6A	1176	1	33	35.11904761904762	0.9503379371143109	2.140672782874618	33	0	2.140672782874618	33	0	NA	NA	NA	0.794392523364486	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014160	Chromosome_6A	444	1	16	39.63963963963964	0.9184227537168713	0.37537537537537535	14	0	0.37537537537537535	14	0	NA	NA	NA	0.986378581493659	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014161	Chromosome_6A	444	1	18	40.54054054054054	0.9866666666666667	0.42483660130718953	18	0	0.42483660130718953	18	0	NA	NA	NA	0.9139009139009139	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014162	Chromosome_6A	2095	2	58	34.463007159904535	0.9417554737453981	1.0340809787357996	46	0	1.8796992481203008	32	0	0.6542845082313212	14	0	1.5611448395490026	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014163	Chromosome_6A	3698	3	119	38.858842617631154	0.8524368510770184	0.6912044237083117	119	0	0.778816199376947	26	0	0.6662225183211192	93	0	0.7735073724921441	63	0	unmethylated (<10%)	P41366	Vitelline membrane outer layer protein 1 (VMO-1) (VMO-I) (VMOI)	NA	hit, no GO BP
GN014164	Chromosome_6A	336	1	8	40.476190476190474	0.5858761987794245	0.7407407407407407	8	0	0.7407407407407407	8	0	NA	NA	NA	0.5993407252022775	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014165	Chromosome_6A	1925	6	51	36.05194805194805	0.8232497295665517	6.965336821451929	51	0	6.441326530612245	25	0	7.516778523489933	26	0	5.997876857749469	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002966	Chromosome_6A	629	1	16	45.786963434022255	0.4868421052631579	77.66798418972331	15	1	77.66798418972331	15	1	NA	NA	NA	76.01211787386394	25	0.76	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014166	Chromosome_6A	441	1	16	41.26984126984127	0.8524827836172526	93.7007874015748	4	1	93.7007874015748	4	1	NA	NA	NA	86.08617594254937	29	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014167	Chromosome_6A	303	1	10	44.224422442244226	0.6763392857142857	0.9523809523809523	10	0	0.9523809523809523	10	0	NA	NA	NA	0.35294117647058826	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014168	Chromosome_6A	525	1	9	43.42857142857143	0.3645833333333333	0.6711409395973155	9	0	0.6711409395973155	9	0	NA	NA	NA	0.5047318611987381	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014169	Chromosome_6A	1430	2	41	43.98601398601399	0.5936974704822083	0.4230118443316413	41	0	0.33003300330033003	26	0	0.5208333333333334	15	0	0.6974041069352964	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014170	Chromosome_6A	21563	5	579	36.200899689282565	0.8198733866244355	1.5348288075560803	548	0	1.0398613518197575	48	0	1.5881913303437967	500	0	1.3824884792626728	55	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN014171	Chromosome_6A	2678	5	31	33.30843913368185	0.4261266810389077	79.56169604573607	31	0.9032258064516129	93.01397205588822	16	1	67.27438468550592	15	0.8	10.822206605762474	32	0.15625	methylated (>=50%)	Q24307	Death-associated inhibitor of apoptosis 2 (Apoptosis 2 inhibitor) (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2)	chaeta development [GO:0022416]; defense response to Gram-negative bacterium [GO:0050829]; negative regulation of apoptotic process [GO:0043066]; peptidoglycan recognition protein signaling pathway [GO:0061057]; positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria [GO:0006964]; positive regulation of protein ubiquitination [GO:0031398]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; regulation of cell cycle [GO:0051726]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN014172	Chromosome_6A	611	2	13	38.1342062193126	0.6224921630094044	0.5847953216374269	13	0	0.6535947712418301	10	0	0.411522633744856	3	0	0.6656426011264721	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014173	Chromosome_6A	824	2	28	41.50485436893204	0.7969052224371374	0.4048582995951417	28	0	0.28776978417266186	27	0	2.1739130434782608	1	0	0.42523033309709424	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014174	Chromosome_6A	1373	13	72	41.73343044428259	1.211173731928449	0	3	0	0	3	0	NA	NA	NA	1.4884449667058364	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014175	Chromosome_6A	1674	5	41	36.26045400238949	0.7463787028578885	0.41020966271649956	41	0	0.585480093676815	19	0	0.29850746268656714	22	0	1.0482180293501049	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014176	Chromosome_6A	1648	7	43	36.04368932038835	0.8038112522686025	0.7769145394006659	43	0	0.7323026851098454	29	0	0.8726003490401396	14	0	0.5059021922428331	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014177	Chromosome_6A	4978	9	77	36.27963037364403	0.47053061224489795	4.179285281647487	59	0.01694915254237288	4.394757131842714	50	0.02	3.389830508474576	9	0	1.9081272084805654	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN000987	Chromosome_6A	3178	2	50	38.51478917558213	0.42564134158722167	25.091296409007914	39	0	23.709016393442624	27	0	29.078014184397162	12	0	4.426416168516937	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014178	Chromosome_6A	261	1	19	52.490421455938694	1.0875	0	7	0	0	7	0	NA	NA	NA	0.8070432868672047	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014179	Chromosome_6A	412	2	22	42.71844660194175	1.1779077322936973	0.7518796992481203	22	0	0.7856341189674523	21	0	0	1	0	0.2751031636863824	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014180	Chromosome_6A	31919	20	795	35.796860803909894	0.7787289347720894	85.99820748375532	609	0.9737274220032841	89.89925083957634	62	0.9838709677419355	85.62771412448784	547	0.9725776965265083	0.8587041373926619	76	0	methylated (>=50%)	P49135	General transcription and DNA repair factor IIH helicase/translocase subunit XPB (TFIIH subunit XPB) (EC 5.6.2.4) (Basic transcription factor 2 89 kDa subunit) (BTF2 p89) (DNA 3'-5' helicase/translocase XPB) (DNA excision repair protein ERCC-3) (DNA repair protein complementing XP-B cells) (TFIIH 89 kDa subunit) (Xeroderma pigmentosum group B-complementing protein)	apoptotic process [GO:0006915]; DNA repair [GO:0006281]; DNA topological change [GO:0006265]; embryonic organ development [GO:0048568]; hair cell differentiation [GO:0035315]; intracellular protein localization [GO:0008104]; nucleotide-excision repair [GO:0006289]; positive regulation of apoptotic process [GO:0043065]; regulation of mitotic cell cycle phase transition [GO:1901990]; response to oxidative stress [GO:0006979]; response to UV [GO:0009411]; transcription by RNA polymerase II [GO:0006366]; transcription elongation by RNA polymerase I [GO:0006362]; transcription initiation at RNA polymerase II promoter [GO:0006367]; transcription-coupled nucleotide-excision repair [GO:0006283]; UV protection [GO:0009650]	hit with GO BP
GN014181	Chromosome_6A	459	1	23	46.62309368191721	0.9228146853146854	0.7792207792207793	23	0	0.7792207792207793	23	0	NA	NA	NA	1.733677609738104	63	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN014182	Chromosome_6A	402	1	11	39.30348258706468	0.7126510878323933	0.6069802731411229	11	0	0.6069802731411229	11	0	NA	NA	NA	0.7256488975718671	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014183	Chromosome_6A	303	1	7	37.62376237623762	0.6536209553158706	0.6369426751592356	7	0	0.6369426751592356	7	0	NA	NA	NA	0.9070294784580499	38	0	unmethylated (<10%)	P10155	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Ro60 autoantigen) (Sjoegren syndrome antigen A2) (Sjoegren syndrome type A antigen) (SS-A) (TROVE domain family member 2)	cellular response to interferon-alpha [GO:0035457]; regulation of gene expression [GO:0010468]; transcription by RNA polymerase III [GO:0006383]	hit with GO BP
GN014184	Chromosome_6A	504	1	20	41.07142857142857	0.9410007468259896	0.7947019867549668	20	0	0.7947019867549668	20	0	NA	NA	NA	0.8174386920980926	44	0	unmethylated (<10%)	Q27274	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein homolog)	NA	hit, no GO BP
GN014185	Chromosome_6A	2425	5	17	33.1958762886598	0.2544753086419753	10.841836734693878	17	0	17.176470588235293	13	0	3.3426183844011144	4	0	17.819905213270143	35	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014186	Chromosome_6A	387	1	5	46.253229974160206	0.26882467352042233	2.380952380952381	5	0	2.380952380952381	5	0	NA	NA	NA	5.486511063958775	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014187	Chromosome_6A	492	1	17	49.390243902439025	0.5700654307524536	0	5	0	0	5	0	NA	NA	NA	16.571428571428573	32	0.03125	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014188	Chromosome_6A	351	1	11	38.17663817663818	0.8618303571428572	1.2944983818770226	11	0	1.2944983818770226	11	0	NA	NA	NA	1.698886936145284	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014189	Chromosome_6A	4474	2	129	36.79034421099687	0.8527003966934823	1.0846498467342607	129	0	0.8201202843083653	43	0	1.285240464344942	86	0	0.5609382967873534	54	0	unmethylated (<10%)	P42700	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2)	NA	hit, no GO BP
GN014190	Chromosome_6A	4448	6	93	33.205935251798564	0.7587380777696259	0.8662613981762918	93	0	0.7357449417535254	21	0	0.9092746009294808	72	0	0.5015839493136219	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014191	Chromosome_6A	4317	2	104	36.252026870511926	0.733847662634848	0.9840758633029164	104	0	0.6010171058714748	51	0	1.2259194395796849	53	0	0.4979253112033195	22	0	unmethylated (<10%)	P42700	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2)	NA	hit, no GO BP
GN014192	Chromosome_6A	9609	4	303	37.22551774378187	0.9109105516972532	0.6767691628659703	293	0	0.702576112412178	65	0	0.6707759245830311	228	0	0.5329153605015674	52	0	unmethylated (<10%)	Q24307	Death-associated inhibitor of apoptosis 2 (Apoptosis 2 inhibitor) (IAP homolog A) (IAP-like protein) (ILP) (dILP) (Inhibitor of apoptosis 2)	chaeta development [GO:0022416]; defense response to Gram-negative bacterium [GO:0050829]; negative regulation of apoptotic process [GO:0043066]; peptidoglycan recognition protein signaling pathway [GO:0061057]; positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria [GO:0006964]; positive regulation of protein ubiquitination [GO:0031398]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; regulation of cell cycle [GO:0051726]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN014193	Chromosome_6A	20102	7	587	37.19032932046562	0.8500099012803807	0.9865225837785333	585	0	0.9233610341643582	25	0	0.9886695332852076	560	0	0.7078080070780801	51	0	unmethylated (<10%)	A5D8Q0	E3 ubiquitin-protein ligase XIAP (EC 2.3.2.27) (Baculoviral IAP repeat-containing protein 4) (RING-type E3 ubiquitin transferase XIAP) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (xXIAP)	negative regulation of apoptotic process [GO:0043066]; negative regulation of proteolysis [GO:0045861]; nucleotide-binding oligomerization domain containing 2 signaling pathway [GO:0070431]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of protein linear polyubiquitination [GO:1902530]; positive regulation of protein ubiquitination [GO:0031398]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN014194	Chromosome_6A	1326	1	60	44.11764705882353	0.9305263157894736	0.3184713375796178	60	0	0.3184713375796178	60	0	NA	NA	NA	0.40334197637568425	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014195	Chromosome_6A	432	1	9	41.43518518518518	0.4897959183673469	1.2422360248447204	9	0	1.2422360248447204	9	0	NA	NA	NA	0.6573181419807187	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014196	Chromosome_6A	1049	2	40	39.18017159199238	0.9985721085197525	0.6892590465249856	40	0	0.713436385255648	39	0	0	1	0	0.6825938566552902	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014197	Chromosome_6A	775	2	30	38.58064516129032	1.0402684563758389	0.45977011494252873	30	0	0.40064102564102566	29	0	1.7543859649122806	1	0	0.8945095619987662	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014198	Chromosome_6A	1062	3	41	40.301318267419965	0.9533004926108375	0.5050505050505051	41	0	0.546448087431694	33	0	0.3663003663003663	8	0	1.2410501193317423	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014199	Chromosome_6A	1810	2	59	36.02209944751381	1.0226282474838884	0.6260206859009254	59	0	0.6237006237006237	18	0	0.6268436578171092	41	0	0.4197761194029851	37	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014200	Chromosome_6A	186	1	8	44.623655913978496	0.9358490566037736	0.5454545454545454	8	0	0.5454545454545454	8	0	NA	NA	NA	0.6824568446407066	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014201	Chromosome_6A	1066	2	41	40.24390243902439	0.9505437146585471	0.6655574043261231	41	0	0.687442713107241	38	0	0.45045045045045046	3	0	1.3477088948787062	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014202	Chromosome_6A	1048	2	42	40.83969465648855	0.9614678899082569	0.6012950971322849	42	0	0.65323897659227	38	0	0.3076923076923077	4	0	0.9286998202516477	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016437	Chromosome_6A	1020	3	11	38.23529411764706	0.30323504770141346	14.689265536723164	11	0	10.687022900763358	2	0	16	9	0	0.7675775253300583	71	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014203	Chromosome_6A	19091	16	561	36.99125242260751	0.8590141516092603	1.0495674634086343	540	0	0.6558641975308642	57	0	1.0963805679159595	483	0	27.79031853523953	42	0.14285714285714285	unmethylated (<10%)	Q86YQ8	Copine-8 (Copine VIII)	cellular response to calcium ion [GO:0071277]; positive regulation of dendrite extension [GO:1903861]	hit with GO BP
GN014204	Chromosome_6A	507	2	6	43.78698224852071	0.2481847107775149	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q8BR93	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN014205	Chromosome_6A	10372	7	143	35.51870420362514	0.4376030429307681	74.06326034063261	141	0.9148936170212766	84.12184057031756	37	0.972972972972973	71.73880485247865	104	0.8942307692307693	7.49185667752443	55	0	methylated (>=50%)	Q9Y385	Ubiquitin-conjugating enzyme E2 J1 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme J1) (Non-canonical ubiquitin-conjugating enzyme 1) (NCUBE-1) (Yeast ubiquitin-conjugating enzyme UBC6 homolog E) (HsUBC6e)	ERAD pathway [GO:0036503]; negative regulation of retrograde protein transport, ER to cytosol [GO:1904153]; protein N-linked glycosylation [GO:0006487]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN014206	Chromosome_6A	1992	1	14	39.2570281124498	0.1824175824175824	1.4344262295081966	13	0	1.4344262295081966	13	0	NA	NA	NA	22.618061309030654	47	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014207	Chromosome_6A	1935	1	16	38.96640826873385	0.21783181357649442	3.3333333333333335	16	0	3.3333333333333335	16	0	NA	NA	NA	1.0836845273931366	35	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014208	Chromosome_6A	2174	2	18	39.28242870285189	0.21463361123299693	38.19845857418112	18	0.05555555555555555	41.234298197706174	17	0.058823529411764705	15.510204081632653	1	0	24.858757062146893	10	0	sparse (10-50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014209	Chromosome_6A	10922	9	304	37.45650979674053	0.7970521231674792	0.9322865554465162	303	0	0.7482993197278912	32	0	0.9534229446702095	271	0	0.7807620237351656	50	0	unmethylated (<10%)	Q91WL8	WW domain-containing oxidoreductase (EC 1.1.1.-)	cellular response to transforming growth factor beta stimulus [GO:0071560]; extrinsic apoptotic signaling pathway [GO:0097191]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; negative regulation of Wnt signaling pathway [GO:0030178]; osteoblast differentiation [GO:0001649]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001241]; positive regulation of transcription by RNA polymerase II [GO:0045944]; skeletal system morphogenesis [GO:0048705]	hit with GO BP
GN014210	Chromosome_6A	13599	8	347	36.03206118096919	0.7886865828349778	0.7906355888694938	347	0	0.2824858757062147	21	0	0.8199391833188532	326	0	1.196808510638298	49	0	unmethylated (<10%)	Q8N5I4	Polyprenol dehydrogenase (EC 1.1.1.441) (DHRSXY) (Dehydrogenase/reductase SDR family member on chromosome X) (Dolichal reductase)	dolichyl monophosphate biosynthetic process [GO:0043048]; positive regulation of autophagy [GO:0010508]	hit with GO BP
GN014211	Chromosome_6A	51666	18	1339	35.466264080826846	0.8256127510417068	1.1936002708880047	1334	0	0.6400487656202377	61	0	1.22046836398065	1273	0	0.637213254035684	40	0	unmethylated (<10%)	Q91WL8	WW domain-containing oxidoreductase (EC 1.1.1.-)	cellular response to transforming growth factor beta stimulus [GO:0071560]; extrinsic apoptotic signaling pathway [GO:0097191]; intrinsic apoptotic signaling pathway by p53 class mediator [GO:0072332]; negative regulation of Wnt signaling pathway [GO:0030178]; osteoblast differentiation [GO:0001649]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of extrinsic apoptotic signaling pathway in absence of ligand [GO:2001241]; positive regulation of transcription by RNA polymerase II [GO:0045944]; skeletal system morphogenesis [GO:0048705]	hit with GO BP
GN014212	Chromosome_6A	20376	15	414	35.50255202198665	0.6456298965183044	90.65631094075718	413	0.9975786924939467	95.08945565283594	48	1	90.22681172782593	365	0.9972602739726028	86.38195004029009	16	1	methylated (>=50%)	Q6PEI7	CTP synthase 1 (EC 6.3.4.2) (CTP synthetase 1) (Protein-asparagine deamidase CTPS1) (EC 3.5.1.-) (UTP--ammonia ligase 1)	'de novo' CTP biosynthetic process [GO:0044210]; CTP biosynthetic process [GO:0006241]; DNA repair-dependent chromatin remodeling [GO:0140861]; negative regulation of chromosome condensation [GO:1902340]; negative regulation of type I interferon production [GO:0032480]; notochord development [GO:0030903]; pyrimidine nucleobase biosynthetic process [GO:0019856]	hit with GO BP
GN014213	Chromosome_6A	699	1	7	40.772532188841204	0.24096326209002264	25.114155251141554	7	0.14285714285714285	25.114155251141554	7	0.14285714285714285	NA	NA	NA	54.790823211875846	15	0.8	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014214	Chromosome_6A	1896	1	17	40.242616033755276	0.221547090441692	1.4285714285714286	17	0	1.4285714285714286	17	0	NA	NA	NA	0.7952286282306164	35	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014215	Chromosome_6A	468	1	4	40.38461538461539	0.2101010101010101	0	4	0	0	4	0	NA	NA	NA	0.2871500358937545	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014216	Chromosome_6A	14130	14	221	35.30785562632696	0.5080849933892801	86.94909463614623	220	0.9454545454545454	88.93568147013782	54	0.8888888888888888	86.60200668896321	166	0.963855421686747	72.95373665480427	42	0.6666666666666666	methylated (>=50%)	A6QR56	Aldehyde dehydrogenase family 16 member A1	aldehyde metabolic process [GO:0006081]	hit with GO BP
GN014217	Chromosome_6A	22477	13	241	34.27058771188326	0.36880791647676914	86.40916530278233	240	0.9833333333333333	93.3957072096863	42	1	85.46589389210878	198	0.9797979797979798	68.17518248175182	14	0.9285714285714286	methylated (>=50%)	Q8N3L3	Beta-taxilin (Muscle-derived protein 77) (hMDP77)	NA	hit, no GO BP
GN014218	Chromosome_6A	1500	1	93	48.8	1.0445056755218785	0.4918032786885246	61	0	0.4918032786885246	61	0	NA	NA	NA	0.6130268199233716	48	0	unmethylated (<10%)	Q9UBI9	Headcase protein homolog (hHDC)	negative regulation of mitotic cell cycle [GO:0045930]; respiratory tube development [GO:0030323]; stress granule assembly [GO:0034063]	hit with GO BP
GN014219	Chromosome_6A	1599	1	40	37.023139462163854	0.7352484739800669	0.5518763796909493	40	0	0.5518763796909493	40	0	NA	NA	NA	0.9583608724388631	57	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014220	Chromosome_6A	3167	6	37	33.407009788443325	0.42079275474733546	49.41414141414141	37	0.5675675675675675	45.66253574833174	16	0.5	52.17391304347826	21	0.6190476190476191	21.3781877373847	32	0.21875	sparse (10-50%)	A4IHY1	Proteasome assembly chaperone 1	chaperone-mediated protein complex assembly [GO:0051131]; proteasome assembly [GO:0043248]	hit with GO BP
GN016920	Chromosome_6A	886	3	23	44.808126410835214	0.5195818459969404	38.95348837209303	5	0.6	7.6923076923076925	2	0	74.07407407407408	3	1	1.0899182561307903	55	0	sparse (10-50%)	P31795	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4); Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; establishment of integrated proviral latency [GO:0075713]; symbiont entry into host cell [GO:0046718]; viral genome integration into host DNA [GO:0044826]	hit with GO BP
GN014221	Chromosome_6A	998	3	30	34.3687374749499	1.0242901128977078	0.6836827711941659	30	0	0.8394543546694648	15	0	0.5640612409347301	15	0	0.7719027402547279	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014222	Chromosome_6A	261	1	1	53.63984674329502	0.06036077705827937	0	1	0	0	1	0	NA	NA	NA	0.37825059101654845	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014223	Chromosome_6A	624	1	36	47.27564102564103	1.0528683914510686	0.4722550177095632	36	0	0.4722550177095632	36	0	NA	NA	NA	0.8088070096607504	55	0	unmethylated (<10%)	Q90XB3	Oligodendrocyte transcription factor 2 (Oligo2)	axon development [GO:0061564]; myelination [GO:0042552]; oligodendrocyte cell fate specification [GO:0021778]; positive regulation of transcription by RNA polymerase II [GO:0045944]; sensory organ development [GO:0007423]	hit with GO BP
GN014224	Chromosome_6A	1927	2	59	39.18007265179035	0.8023840106144227	0.4484304932735426	59	0	0.5672149744753261	47	0	0.14492753623188406	12	0	1.2693375644585483	52	0	unmethylated (<10%)	Q23157	Innexin-11 (Protein opu-11)	NA	hit, no GO BP
GN014225	Chromosome_6A	1982	2	54	38.950554994954594	0.7204604355289287	0.9507557289127255	54	0	1.128577186618299	36	0	0.6785934608266502	18	0	0.8534850640113798	46	0	unmethylated (<10%)	Q23157	Innexin-11 (Protein opu-11)	NA	hit, no GO BP
GN014226	Chromosome_6A	378	1	16	47.61904761904762	0.748144482929243	0	16	0	0	16	0	NA	NA	NA	0.3879310344827586	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014227	Chromosome_6A	477	1	22	46.331236897274636	0.8745	0.9879253567508233	22	0	0.9879253567508233	22	0	NA	NA	NA	0.5760670332547787	77	0	unmethylated (<10%)	F1QMY1	Dynein light chain Tctex-type protein 2B (Tctex1 domain-containing protein 2)	intraciliary retrograde transport [GO:0035721]; microtubule-based movement [GO:0007018]	hit with GO BP
GN014228	Chromosome_6A	716	2	23	41.06145251396648	0.7620898699615901	0.21253985122210414	23	0	0	14	0	0.5141388174807198	9	0	1.1663286004056794	43	0	unmethylated (<10%)	Q988C9	4-pyridoxate dehydrogenase (EC 1.1.99.42) (4-pyridoxic acid dehydrogenase) (4-PADH)	vitamin B6 catabolic process [GO:0042820]	hit with GO BP
GN014229	Chromosome_6A	11163	11	262	35.178715399086265	0.7616263202849941	7.663228038700583	261	0	6.741573033707865	62	0	7.884905810348939	199	0	9.598214285714286	40	0	unmethylated (<10%)	P18172	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	NA	hit, no GO BP
GN014230	Chromosome_6A	3018	1	119	44.731610337972164	0.7883026148568117	1.2474012474012475	116	0	1.2474012474012475	116	0	NA	NA	NA	0.9345794392523364	55	0	unmethylated (<10%)	P36633	Diamine oxidase [copper-containing] (Diamine oxidase) (EC 1.4.3.22) (Amiloride-binding protein 1) (Amine oxidase copper domain-containing protein 1) (Histaminase)	putrescine metabolic process [GO:0009445]	hit with GO BP
GN014231	Chromosome_6A	5602	7	85	35.43377365226705	0.48475007635142014	64.34612882238126	84	0.6666666666666666	76.0557248585111	44	0.8863636363636364	52.72255834053587	40	0.425	0.36596523330283626	55	0	methylated (>=50%)	A8E4N3	Radial spoke head protein 3 homolog (A-kinase anchor protein RSPH3) (Radial spoke head-like protein 2)	NA	hit, no GO BP
GN014232	Chromosome_6A	9260	3	255	34.51403887688985	0.9260424890083192	0.7121741467347488	253	0	0.6873977086743044	71	0	0.718572998562854	182	0	0.7451564828614009	57	0	unmethylated (<10%)	Q9H4Q3	PR domain zinc finger protein 13 (EC 2.1.1.-) (PR domain-containing protein 13)	GABAergic neuron differentiation [GO:0097154]; hypothalamus cell differentiation [GO:0021979]; regulation of gene expression [GO:0010468]	hit with GO BP
GN014233	Chromosome_6A	4113	3	159	39.77631898857282	0.982286409516943	0.5327736519212141	159	0	0.6854949273375377	122	0	0.3140950137416568	37	0	0.6260434056761269	50	0	unmethylated (<10%)	Q8N8K9	Uncharacterized protein KIAA1958	NA	hit, no GO BP
GN014234	Chromosome_6A	8732	6	136	36.37196518552451	0.47189496773373174	83.52150537634408	136	0.9044117647058824	76.8153980752406	22	0.8181818181818182	84.73876449102747	114	0.9210526315789473	0.8020050125313283	25	0	methylated (>=50%)	A1L209	Ataxin-7-like protein 3 (SAGA-associated factor 11 homolog)	positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN014235	Chromosome_6A	2143	3	24	37.42417172188521	0.3229030637870417	84.51816745655609	24	0.9166666666666666	90.65040650406505	4	1	83.03921568627452	20	0.9	93.21266968325791	2	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014236	Chromosome_6A	18817	11	282	35.71770207790827	0.4713212625071612	47.51198433596651	279	0.4946236559139785	71.34778510838831	60	0.8	43.52588856489873	219	0.410958904109589	68.0327868852459	11	0.8181818181818182	sparse (10-50%)	Q6QDP7	Cyclic AMP-responsive element-binding protein 3-like protein 2 (cAMP-responsive element-binding protein 3-like protein 2) (SCI-related protein Ra69) [Cleaved into: Processed cyclic AMP-responsive element-binding protein 3-like protein 2]	cartilage development [GO:0051216]; chondrocyte differentiation [GO:0002062]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron projection development [GO:0010976]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN014237	Chromosome_6A	837	1	69	67.38351254480287	0.7268185250440473	6.4935064935064934	7	0	6.4935064935064934	7	0	NA	NA	NA	4.52054794520548	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014238	Chromosome_6A	483	1	16	44.927536231884055	0.6605128205128206	20.563847429519072	16	0.0625	20.563847429519072	16	0.0625	NA	NA	NA	4.061470911086718	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014239	Chromosome_6A	372	1	11	41.12903225806452	0.7016460905349794	1.1111111111111112	11	0	1.1111111111111112	11	0	NA	NA	NA	16.13045394446893	33	0.030303030303030304	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014240	Chromosome_6A	1179	1	39	41.81509754028838	0.7586872586872587	1.3227513227513228	39	0	1.3227513227513228	39	0	NA	NA	NA	1.2138970280452073	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014241	Chromosome_6A	573	1	31	45.20069808027923	1.0595919828203293	6.196078431372549	31	0	6.196078431372549	31	0	NA	NA	NA	3.380281690140845	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014242	Chromosome_6A	23761	16	226	33.36559909094735	0.3456093182178741	58.21380662470333	220	0.65	63.19444444444444	24	0.6666666666666666	57.72629432423247	196	0.6479591836734694	72.97895902547066	13	0.9230769230769231	methylated (>=50%)	Q9CXP4	Rho GTPase-activating protein 8 (Rho-type GTPase-activating protein 8)	negative regulation of endocytic recycling [GO:2001136]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN014243	Chromosome_6A	37135	47	475	37.04860643597684	0.37308886114602	83.75473258192262	443	0.9029345372460497	90.40603665109595	68	0.9852941176470589	82.83818577936225	375	0.888	16.174010039040713	38	0.15789473684210525	methylated (>=50%)	P35761	Dual specificity protein kinase TTK (EC 2.7.12.1) (ESK) (PYT)	chromosome segregation [GO:0007059]; female meiosis chromosome segregation [GO:0016321]; meiotic spindle assembly checkpoint signaling [GO:0033316]; mitotic spindle assembly checkpoint signaling [GO:0007094]; peptidyl-serine phosphorylation [GO:0018105]; peptidyl-threonine phosphorylation [GO:0018107]; peptidyl-tyrosine phosphorylation [GO:0018108]; protein autophosphorylation [GO:0046777]; protein localization to chromosome [GO:0034502]; protein localization to kinetochore [GO:0034501]; protein localization to meiotic spindle midzone [GO:1903096]; repair of mitotic kinetochore microtubule attachment defect [GO:0140273]	hit with GO BP
GN014244	Chromosome_6A	318	1	12	49.37106918238994	0.6235294117647059	1.7985611510791366	12	0	1.7985611510791366	12	0	NA	NA	NA	0.7338740826573967	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014245	Chromosome_6A	390	1	8	40.256410256410255	0.5194805194805194	0	8	0	0	8	0	NA	NA	NA	0.6545454545454545	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014246	Chromosome_6A	831	1	5	40.19253910950662	0.14906899149714778	0	5	0	0	5	0	NA	NA	NA	0.9615384615384616	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014247	Chromosome_6A	1143	1	13	40.24496937882765	0.2808884688090737	1.70316301703163	13	0	1.70316301703163	13	0	NA	NA	NA	0.7974481658692185	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014248	Chromosome_6A	402	1	1	57.960199004975124	0.041062308478038816	80	1	1	80	1	1	NA	NA	NA	80.812324929972	17	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014249	Chromosome_6A	7252	6	154	35.94870380584666	0.657305467108477	18.023471278567015	154	0.16883116883116883	14.187446259673258	25	0.12	18.667051356030004	129	0.17829457364341086	8.424657534246576	12	0	sparse (10-50%)	A6MEY4	Basic phospholipase A2 BFPA (svPLA2) (EC 3.1.1.4) (Antimicrobial phospholipase A2) (Phosphatidylcholine 2-acylhydrolase)	arachidonate secretion [GO:0050482]; lipid catabolic process [GO:0016042]; phospholipid metabolic process [GO:0006644]	hit with GO BP
GN014250	Chromosome_6A	1944	1	11	39.86625514403292	0.14244035010591102	15.022421524663677	11	0	15.022421524663677	11	0	NA	NA	NA	2.8284671532846715	24	0	sparse (10-50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014251	Chromosome_6A	19381	14	242	34.62153655642124	0.41910481637029756	77.29506278761407	229	0.8908296943231441	84.32285603414823	43	0.9302325581395349	75.5271378367825	186	0.8817204301075269	7.769556025369979	46	0.06521739130434782	methylated (>=50%)	Q60598	Src substrate cortactin	actin cytoskeleton organization [GO:0030036]; cell migration [GO:0016477]; cell motility [GO:0048870]; dendritic spine maintenance [GO:0097062]; focal adhesion assembly [GO:0048041]; intracellular protein transport [GO:0006886]; lamellipodium organization [GO:0097581]; modification of postsynaptic actin cytoskeleton [GO:0098885]; modification of postsynaptic structure [GO:0099010]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; neuron projection morphogenesis [GO:0048812]; positive regulation of actin filament polymerization [GO:0030838]; positive regulation of chemotaxis [GO:0050921]; positive regulation of smooth muscle contraction [GO:0045987]; receptor-mediated endocytosis [GO:0006898]; regulation of actin filament polymerization [GO:0030833]; regulation of axon extension [GO:0030516]; regulation of cell projection assembly [GO:0060491]; regulation of mitophagy [GO:1901524]; substrate-dependent cell migration, cell extension [GO:0006930]	hit with GO BP
GN014252	Chromosome_6A	1656	1	63	41.243961352657	0.9054992362171921	0.6109022556390977	63	0	0.6109022556390977	63	0	NA	NA	NA	0.7208387942332897	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014253	Chromosome_6A	3378	5	103	35.16873889875666	0.9889770672973065	0.7599858607281725	103	0	0.5431830526887561	44	0	0.8645533141210374	59	0	0.34083162917518744	38	0	unmethylated (<10%)	Q6NVU6	Ufm1-specific protease 1 (UfSP1) (EC 3.4.22.-)	protein maturation [GO:0051604]; protein ufmylation [GO:0071569]	hit with GO BP
GN014254	Chromosome_6A	3974	8	119	34.952189229994964	0.9804615097547322	0.49691910157026437	119	0	0.6086142322097379	54	0	0.41450777202072536	65	0	0.43274432023079695	54	0	unmethylated (<10%)	Q0V8T7	Contactin-associated protein like 5-3 (Cell recognition molecule Caspr5-3) (Cell recognition molecule Caspr5c) (Contactin-associated protein-like 5c)	nervous system development [GO:0007399]; neuron differentiation [GO:0030182]; retina homeostasis [GO:0001895]; signal transduction [GO:0007165]	hit with GO BP
GN014255	Chromosome_6A	2384	9	74	36.91275167785235	0.9112820327391252	0.26493965263467767	74	0	0.24975024975024976	45	0	0.2867383512544803	29	0	0.4519309778142975	48	0	unmethylated (<10%)	Q08431	Lactadherin (Breast epithelial antigen BA46) (HMFG) (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (SED1) [Cleaved into: Lactadherin short form; Medin]	apoptotic cell clearance [GO:0043277]	hit with GO BP
GN014256	Chromosome_6A	2599	9	60	36.3986148518661	0.6979054779806659	0.522594528127882	60	0	0.604089219330855	40	0	0.36330608537693004	20	0	0.5025125628140703	54	0	unmethylated (<10%)	Q0V8T8	Contactin-associated protein like 5-2 (Cell recognition molecule Caspr5-2) (Cell recognition molecule Caspr5b) (Contactin-associated protein-like 5b)	nervous system development [GO:0007399]; neuron differentiation [GO:0030182]; retina homeostasis [GO:0001895]; signal transduction [GO:0007165]	hit with GO BP
GN014257	Chromosome_6A	3575	9	107	37.73426573426573	0.8415836138428706	0.3176930596285435	106	0	0.20725388601036268	50	0	0.4162812210915819	56	0	0.6008261359369133	46	0	unmethylated (<10%)	Q0V8T8	Contactin-associated protein like 5-2 (Cell recognition molecule Caspr5-2) (Cell recognition molecule Caspr5b) (Contactin-associated protein-like 5b)	nervous system development [GO:0007399]; neuron differentiation [GO:0030182]; retina homeostasis [GO:0001895]; signal transduction [GO:0007165]	hit with GO BP
GN014258	Chromosome_6A	4582	9	150	37.69096464426015	0.9219315895372233	0.6467593229668364	150	0	0.49504950495049505	45	0	0.7051648561082523	105	0	0.5785920925747348	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014259	Chromosome_6A	942	2	39	39.17197452229299	1.079640296226637	0.46511627906976744	39	0	0.5494505494505495	36	0	0	3	0	1.6079632465543645	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014260	Chromosome_6A	420	1	9	43.57142857142857	0.46153846153846156	0.33557046979865773	9	0	0.33557046979865773	9	0	NA	NA	NA	1.5454202789295137	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014261	Chromosome_6A	936	1	53	47.22222222222222	1.0158912188728701	0.6917755572636434	53	0	0.6917755572636434	53	0	NA	NA	NA	0.4423380726698262	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014262	Chromosome_6A	3150	5	103	35.80952380952381	1.0203632361034674	0.5269100489273617	103	0	1.0695187165775402	32	0	0.3143006809848088	71	0	0.8504606661941885	54	0	unmethylated (<10%)	Q9TWL9	Conodipine-M alpha chain (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase) (Phospholipase A2) (PLA2)	arachidonate secretion [GO:0050482]; phospholipid metabolic process [GO:0006644]	hit with GO BP
GN014263	Chromosome_6A	2490	4	58	32.89156626506024	0.8648525642561142	0.6072874493927125	58	0	0.5217391304347826	31	0	0.6615214994487321	27	0	2.2222222222222223	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014264	Chromosome_6A	4864	3	136	35.485197368421055	0.8897485181035492	0.8053275514945021	136	0	1.7462165308498254	24	0	0.660950339406931	112	0	0.6048387096774194	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014265	Chromosome_6A	1322	3	28	36.38426626323752	0.6399944673052319	0.42075736325385693	28	0	0.5050505050505051	11	0	0.3883495145631068	17	0	0.3915171288743883	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014266	Chromosome_6A	715	2	26	36.50349650349651	1.0917312661498708	0.33444816053511706	26	0	0.27972027972027974	19	0	0.4158004158004158	7	0	0.44781260764726144	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014267	Chromosome_6A	809	3	26	39.431396786155744	0.8268731818539193	0.37174721189591076	26	0	0.3460207612456747	22	0	0.4784688995215311	4	0	0.540091400083091	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014268	Chromosome_6A	282	1	15	43.262411347517734	1.1370967741935485	13.266097750193948	15	0	13.266097750193948	15	0	NA	NA	NA	70.08086253369272	20	0.55	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014269	Chromosome_6A	1210	2	20	37.35537190082645	0.4742587257726302	10.766423357664234	15	0	10.766423357664234	15	0	NA	NA	NA	36.527886881382564	33	0.24242424242424243	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014270	Chromosome_6A	25378	27	353	35.89723382457247	0.4326321342692184	79.33146210768054	308	0.8441558441558441	83.78378378378379	77	0.8441558441558441	78.00943162074957	231	0.8441558441558441	25.625	29	0.13793103448275862	methylated (>=50%)	Q91V92	ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme)	acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA metabolic process [GO:0006084]; acyl-CoA biosynthetic process [GO:0071616]; citrate metabolic process [GO:0006101]; coenzyme A metabolic process [GO:0015936]; fatty acid biosynthetic process [GO:0006633]; lipid biosynthetic process [GO:0008610]; malonyl-CoA biosynthetic process [GO:2001295]; negative regulation of ferroptosis [GO:0110076]; oxaloacetate metabolic process [GO:0006107]	hit with GO BP
GN014271	Chromosome_6A	779	2	19	37.22721437740693	0.7045075919843876	0.644122383252818	19	0	0.4132231404958678	16	0	1.4598540145985401	3	0	0.4151291512915129	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014272	Chromosome_6A	832	3	20	35.9375	0.748942299036817	0.6108202443280978	20	0	0.7099391480730223	18	0	0	2	0	0.76103500761035	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014273	Chromosome_6A	1530	1	37	35.88235294117647	0.752612406604802	0.4900868790376476	37	0	0.4900868790376476	37	0	NA	NA	NA	0.3952569169960474	35	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014274	Chromosome_6A	258	1	6	50	0.37319189971070393	1.5384615384615385	6	0	1.5384615384615385	6	0	NA	NA	NA	1.8682399213372665	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014275	Chromosome_6A	1587	1	41	36.294896030245745	0.7878982357143722	0.633602796591654	41	0	0.633602796591654	41	0	NA	NA	NA	1.3483598309519018	61	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014276	Chromosome_6A	14295	6	331	34.97726477789437	0.758228323971748	4.559915164369035	293	0	0.7037533512064343	78	0	5.686044235662556	215	0	0.710405348934392	62	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN014277	Chromosome_6A	2506	5	21	33.63926576217079	0.29832995090758607	5.614973262032086	21	0	1.5053763440860215	9	0	7.468477206595538	12	0	0.5131494547787043	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014278	Chromosome_6A	715	3	19	35.10489510489511	0.871168398101834	2.3890784982935154	16	0	2.6515151515151514	14	0	0	2	0	2.5178826895565094	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014279	Chromosome_6A	13266	10	149	34.82587064676617	0.3717728346429295	73.0201644699786	139	0.841726618705036	91.62921348314607	37	1	68.352825137382	102	0.7843137254901961	86.57870791628753	41	0.975609756097561	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014280	Chromosome_6A	6044	8	201	36.51555261416281	0.9976693422420632	1.0639541681281421	185	0	1.3182674199623352	39	0	1.0057471264367817	146	0	1.8497965223825379	43	0	unmethylated (<10%)	Q63046	Runt-related transcription factor 1 (Acute myeloid leukemia 1 protein) (Core-binding factor subunit alpha-2) (CBF-alpha-2) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEA2-alpha B) (PEBP2-alpha B)	behavioral response to pain [GO:0048266]; cellular response to transforming growth factor beta stimulus [GO:0071560]; central nervous system development [GO:0007417]; chondrocyte differentiation [GO:0002062]; definitive hemopoiesis [GO:0060216]; embryonic hemopoiesis [GO:0035162]; hair follicle morphogenesis [GO:0031069]; hemopoiesis [GO:0030097]; in utero embryonic development [GO:0001701]; liver development [GO:0001889]; myeloid cell differentiation [GO:0030099]; myeloid leukocyte differentiation [GO:0002573]; myeloid progenitor cell differentiation [GO:0002318]; negative regulation of CD4-positive, alpha-beta T cell differentiation [GO:0043371]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of granulocyte differentiation [GO:0030853]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron fate commitment [GO:0048663]; ossification [GO:0001503]; positive regulation of angiogenesis [GO:0045766]; positive regulation of CD8-positive, alpha-beta T cell differentiation [GO:0043378]; positive regulation of cell maturation [GO:1903431]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of granulocyte differentiation [GO:0030854]; positive regulation of interleukin-2 production [GO:0032743]; positive regulation of progesterone secretion [GO:2000872]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of type II interferon production [GO:0032729]; regulation of cell differentiation [GO:0045595]; regulation of DNA-templated transcription [GO:0006355]; regulation of hair follicle cell proliferation [GO:0071336]; regulation of signal transduction [GO:0009966]; regulation of T cell anergy [GO:0002667]; regulation of transcription by RNA polymerase II [GO:0006357]; response to denervation involved in regulation of muscle adaptation [GO:0014894]; response to retinoic acid [GO:0032526]; skeletal system development [GO:0001501]	hit with GO BP
GN014281	Chromosome_6A	7644	6	65	36.106750392464676	0.2680912781575159	88.31321754489255	65	0.9692307692307692	91.42185663924795	37	1	85.19174041297936	28	0.9285714285714286	80.30233623453962	39	0.9487179487179487	methylated (>=50%)	Q9SR22	Pectin acetylesterase 5 (EC 3.1.1.-)	NA	hit, no GO BP
GN014282	Chromosome_6A	1686	1	53	39.08659549228944	0.8230602019011126	0.39577836411609496	53	0	0.39577836411609496	53	0	NA	NA	NA	0.6861063464837049	46	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014283	Chromosome_6A	1734	1	56	39.15801614763552	0.8427849815133052	0.5003335557038026	56	0	0.5003335557038026	56	0	NA	NA	NA	0.350498786734969	54	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014284	Chromosome_6A	1745	2	51	38.22349570200573	0.8044963931225254	0.5474452554744526	51	0	0.5494505494505495	40	0	0.539568345323741	11	0	0.6006006006006006	61	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014285	Chromosome_6A	471	1	11	49.89384288747346	0.40432339628531294	0	11	0	0	11	0	NA	NA	NA	0.3561887800534283	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014286	Chromosome_6A	297	1	11	43.77104377104377	0.8374775698538837	0.5191434133679429	11	0	0.5191434133679429	11	0	NA	NA	NA	0.48791306276336216	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014287	Chromosome_6A	4813	3	72	32.142115104924166	0.579931921559177	0.7063841130214581	70	0	0.8130081300813008	8	0	0.6947524020694752	62	0	0.49520272361497986	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014288	Chromosome_6A	525	1	6	42.857142857142854	0.25	1.2953367875647668	6	0	1.2953367875647668	6	0	NA	NA	NA	0.7988165680473372	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014289	Chromosome_6A	678	1	20	42.772861356932154	0.6449771689497716	1.2244897959183674	15	0	1.2244897959183674	15	0	NA	NA	NA	0.47978067169294036	47	0	unmethylated (<10%)	Q98943	Caspase-2 (CASP-2) (EC 3.4.22.55) (ICH-1L/1S) (Protease ICH-1) [Cleaved into: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]	apoptotic process [GO:0006915]; cellular response to mechanical stimulus [GO:0071260]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; positive regulation of neuron apoptotic process [GO:0043525]; protein processing [GO:0016485]	hit with GO BP
GN014290	Chromosome_6A	465	1	18	40.645161290322584	0.9385512446736937	0.4092769440654843	18	0	0.4092769440654843	18	0	NA	NA	NA	0.3889158969372873	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014291	Chromosome_6A	465	1	16	43.87096774193548	0.7153846153846154	0	14	0	0	14	0	NA	NA	NA	0.7238307349665924	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014292	Chromosome_6A	288	1	12	40.27777777777778	1.0425339366515838	0.6993006993006993	10	0	0.6993006993006993	10	0	NA	NA	NA	0.7741935483870968	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014293	Chromosome_6A	572	2	9	45.10489510489511	0.33245075879883756	8.300907911802854	9	0	7.214765100671141	8	0	12	1	0	2.785673678226265	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014294	Chromosome_6A	174	1	3	45.40229885057471	0.38666666666666666	4.301075268817204	3	0	4.301075268817204	3	0	NA	NA	NA	4.166666666666667	3	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001358	Chromosome_6A	575	2	5	34.78260869565217	0.29102135843708876	NA	0	NA	NA	NA	NA	NA	NA	NA	8.411214953271028	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014295	Chromosome_6A	517	2	10	37.524177949709866	0.54953231292517	0.20040080160320642	10	0	0.20040080160320642	10	0	NA	NA	NA	0.42643923240938164	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014296	Chromosome_6A	17774	20	417	34.31979295600315	0.798431309181398	0.6134376660387384	278	0	0.560081466395112	56	0	0.6259314456035767	222	0	1.1464968152866242	37	0	unmethylated (<10%)	Q1JPJ2	Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)	bradykinin catabolic process [GO:0010815]; negative regulation of programmed cell death [GO:0043069]; proteolysis [GO:0006508]	hit with GO BP
GN014297	Chromosome_6A	16492	6	291	39.237205918020855	0.47992103936831493	81.71673819742489	196	0.8622448979591837	73.5576923076923	31	0.7419354838709677	82.81909710945112	165	0.8848484848484849	44.96042216358839	37	0.3783783783783784	methylated (>=50%)	Q9P802	Kinetochore protein mis18	CENP-A containing chromatin assembly [GO:0034080]	hit with GO BP
GN014298	Chromosome_6A	640	2	24	40.9375	0.8951048951048951	0.12886597938144329	24	0	0.2053388090349076	16	0	0	8	0	0.48517520215633425	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014299	Chromosome_6A	270	1	12	48.148148148148145	0.7786589762076424	0.3194888178913738	12	0	0.3194888178913738	12	0	NA	NA	NA	3.4516765285996054	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014300	Chromosome_6A	2556	3	63	37.44131455399061	0.7063560994867746	2.681992337164751	63	0	2.6467203682393556	24	0	2.6995979322228605	39	0	3.1135531135531136	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014301	Chromosome_6A	10854	7	259	35.83010871568086	0.744072036018009	2.25623433170603	254	0	0.7853403141361257	55	0	2.5712912528035887	199	0	1.103448275862069	78	0	unmethylated (<10%)	A4IFU7	Transcription factor EC	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN014302	Chromosome_6A	17994	8	190	31.288207180171167	0.4328777190018563	71.90931404211342	187	0.8502673796791443	79.42942942942943	22	0.8636363636363636	71.20141342756183	165	0.8484848484848485	0.5544354838709677	53	0	methylated (>=50%)	Q9Y3A2	Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) (UTP11-like protein)	maturation of SSU-rRNA [GO:0030490]; nervous system development [GO:0007399]; positive regulation of apoptotic process [GO:0043065]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN014303	Chromosome_6A	363	1	19	45.45454545454545	1.0196629213483146	0.6071118820468343	19	0	0.6071118820468343	19	0	NA	NA	NA	0.5296610169491526	72	0	unmethylated (<10%)	Q5RJ80	Caprin-2 (RNA granule protein 140)	dorsal/ventral axis specification [GO:0009950]; dorsal/ventral pattern formation [GO:0009953]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of Wnt signaling pathway [GO:0030177]	hit with GO BP
GN014304	Chromosome_6A	222	1	10	42.34234234234234	1.0068027210884354	0.3575685339690107	10	0	0.3575685339690107	10	0	NA	NA	NA	0.667853962600178	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014305	Chromosome_6A	363	1	18	44.62809917355372	1.0033783783783783	0.5102040816326531	18	0	0.5102040816326531	18	0	NA	NA	NA	1.028202115158637	49	0	unmethylated (<10%)	Q5RJ80	Caprin-2 (RNA granule protein 140)	dorsal/ventral axis specification [GO:0009950]; dorsal/ventral pattern formation [GO:0009953]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of Wnt signaling pathway [GO:0030177]	hit with GO BP
GN014306	Chromosome_6A	6228	1	219	40.73538856775851	0.8557521457611805	0.43438731184968177	215	0	0.43438731184968177	215	0	NA	NA	NA	0.3183023872679045	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014307	Chromosome_6A	1313	2	41	38.69002284843869	0.8362797489591748	0.4884856943475227	41	0	0.4909983633387889	36	0	0.47393364928909953	5	0	0.42323066071008697	113	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014308	Chromosome_6A	612	1	12	42.97385620915033	0.4269271014998256	1.4285714285714286	12	0	1.4285714285714286	12	0	NA	NA	NA	1.0405827263267429	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014309	Chromosome_6A	2260	2	32	38.008849557522126	0.3991963083173257	60.36217303822938	26	0.7692307692307693	60.36217303822938	26	0.7692307692307693	NA	NA	NA	73.0829420970266	14	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014310	Chromosome_6A	2146	6	21	32.898415657036345	0.3627100637434808	83.60215053763442	14	0.9285714285714286	86.5546218487395	7	1	82.21343873517786	7	0.8571428571428571	65.17533252720678	22	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014311	Chromosome_6A	228	1	12	50	1.1362126245847175	0.4672897196261682	10	0	0.4672897196261682	10	0	NA	NA	NA	0.41594454072790293	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014312	Chromosome_6A	568	2	25	42.605633802816904	0.9731359649122807	1.2263099219620959	25	0	1.301775147928994	24	0	0	1	0	1.4209591474245116	10	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN014313	Chromosome_6A	2155	7	54	35.91647331786543	0.7826876513317191	0.7664793050587634	54	0	0.8226221079691517	25	0	0.7110208227526663	29	0	0.5405405405405406	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014314	Chromosome_6A	4222	5	50	33.72809095215538	0.4193950856670587	76.91477885652642	49	0.8571428571428571	85.83535108958837	17	0.9411764705882353	73.1457800511509	32	0.8125	59.280089988751406	37	0.5945945945945946	methylated (>=50%)	Q0VC80	Threonylcarbamoyl-AMP synthase (EC 2.7.7.87)	regulation of translational fidelity [GO:0006450]; tRNA threonylcarbamoyladenosine modification [GO:0002949]	hit with GO BP
GN014315	Chromosome_6A	17957	15	169	34.827643815782146	0.31677453605931627	76.37969094922737	167	0.8982035928143712	64.83375959079284	33	0.8181818181818182	78.31972496776966	134	0.917910447761194	65.54096310193871	25	0.72	methylated (>=50%)	Q8BTW8	Mitochondrial tRNA methylthiotransferase CDK5RAP1 (EC 2.8.4.3) (CDK5 activator-binding protein C42) (CDK5 regulatory subunit-associated protein 1) (mt-tRNA-2-methylthio-N6-dimethylallyladenosine synthase) (mt-tRNA-N6-(dimethylallyl)adenosine(37) methylthiotransferase)	mitochondrial tRNA modification [GO:0070900]; negative regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045736]; positive regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0045737]; positive regulation of mitochondrial translation [GO:0070131]; positive regulation of translational fidelity [GO:0045903]; regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0000079]; RNA modification [GO:0009451]	hit with GO BP
GN014316	Chromosome_6A	4960	7	113	35.766129032258064	0.714652753073244	6.512754738492233	113	0.035398230088495575	7.575757575757576	37	0	6.055045871559633	76	0.05263157894736842	21.16434202546998	31	0.25806451612903225	unmethylated (<10%)	Q9CY64	Biliverdin reductase A (BVR A) (EC 1.3.1.24) (Biliverdin-IX alpha-reductase)	apoptotic DNA fragmentation [GO:0006309]; canonical NF-kappaB signal transduction [GO:0007249]; chemotaxis [GO:0006935]; complement component C5a signaling pathway [GO:0038178]; ear development [GO:0043583]; fatty acid metabolic process [GO:0006631]; gallbladder development [GO:0061010]; gene expression [GO:0010467]; glucose homeostasis [GO:0042593]; glycogen metabolic process [GO:0005977]; heme catabolic process [GO:0042167]; hemoglobin metabolic process [GO:0020027]; homeostasis of number of cells [GO:0048872]; immune response [GO:0006955]; inflammatory response [GO:0006954]; insulin metabolic process [GO:1901142]; insulin receptor signaling pathway [GO:0008286]; lipid metabolic process [GO:0006629]; lipid oxidation [GO:0034440]; MAPK cascade [GO:0000165]; negative regulation of apoptotic process [GO:0043066]; peptidyl-serine phosphorylation [GO:0018105]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; pigment metabolic process [GO:0042440]; protein oxidation [GO:0018158]; protein phosphorylation [GO:0006468]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of catalytic activity [GO:0050790]; response to cyclosporin A [GO:1905237]; response to food [GO:0032094]; response to lipopolysaccharide [GO:0032496]; response to oxidative stress [GO:0006979]; sensory perception of itch [GO:0160025]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN014317	Chromosome_6A	36924	41	1055	36.74033149171271	0.8466792707374621	0.7855263410605566	1053	0	0.7229647630619684	407	0	0.8144465975791277	646	0	0.5837711617046117	51	0	unmethylated (<10%)	Q7TN88	Polycystin-1-like protein 2 (Polycystin-1L2) (PC1-like 2 protein) (Polycystic kidney disease protein 1-like 2)	detection of mechanical stimulus [GO:0050982]	hit with GO BP
GN014318	Chromosome_6A	25815	11	408	35.54135192717413	0.5022971376771783	88.1347045775358	402	0.9825870646766169	91.6601714731099	44	1	87.72774303837329	358	0.9804469273743017	82.2592873388931	14	1	methylated (>=50%)	P56950	E3 ubiquitin-protein ligase Mdm2 (EC 2.3.2.27) (Double minute 2 protein) (Cdm2) (RING-type E3 ubiquitin transferase Mdm2) (p53-binding protein Mdm2)	apoptotic process [GO:0006915]; negative regulation of apoptotic process [GO:0043066]; positive regulation of mitotic cell cycle [GO:0045931]; protein ubiquitination [GO:0016567]; regulation of gene expression [GO:0010468]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN014319	Chromosome_6A	9247	9	152	35.200605601816804	0.5331906983801828	90.35013611189336	152	0.9802631578947368	90.38923594425756	38	1	90.34064395706953	114	0.9736842105263158	78.84174311926606	40	1	methylated (>=50%)	O77783	Exostosin-2 (EC 2.4.1.224) (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL)	heparan sulfate proteoglycan biosynthetic process [GO:0015012]	hit with GO BP
GN014320	Chromosome_6A	787	2	35	42.94790343074968	0.9665929746990911	0.684931506849315	22	0	0.31446540880503143	17	0	1.6666666666666667	5	0	0.9912767644726408	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014321	Chromosome_6A	10539	11	355	38.039662207040514	0.9312485345575596	3.974175795099751	355	0	0.7139214686384497	98	0	4.828046744574291	257	0	4.96929089893914	58	0	unmethylated (<10%)	Q9VEG6	Chorion peroxidase (EC 1.11.1.7) (Peroxinectin-related protein) (Dpxt)	chorion-containing eggshell formation [GO:0007304]; egg chorion assembly [GO:0007306]; follicle cell of egg chamber development [GO:0030707]; hydrogen peroxide metabolic process [GO:0042743]; prostaglandin biosynthetic process [GO:0001516]; response to oxidative stress [GO:0006979]	hit with GO BP
GN014322	Chromosome_6A	6576	9	81	34.154501216545015	0.42272943716072503	72.19570405727923	81	0.7037037037037037	65.07747318235995	15	0.7333333333333333	73.62138935306756	66	0.696969696969697	46.25935162094763	41	0.5121951219512195	methylated (>=50%)	P97865	Peroxisomal targeting signal 2 receptor (PTS2 receptor) (Peroxin-7)	endochondral ossification [GO:0001958]; ether lipid biosynthetic process [GO:0008611]; fatty acid beta-oxidation [GO:0006635]; neuron migration [GO:0001764]; peroxisome organization [GO:0007031]; protein import into peroxisome matrix [GO:0016558]; protein targeting to peroxisome [GO:0006625]	hit with GO BP
GN014323	Chromosome_6A	15486	11	222	38.11184295492703	0.3953082633176098	93.21914594087283	221	0.9864253393665159	95.42077069293244	128	1	91.39877125303614	93	0.967741935483871	95.65459610027855	33	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014324	Chromosome_6A	7843	6	301	38.6076756343236	1.0301220223134495	14.614270191959434	285	0.017543859649122806	14.913745130773512	41	0.0975609756097561	14.577831945290812	244	0.004098360655737705	0.4657828735220351	67	0	sparse (10-50%)	Q5B778	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase) (Glucose-repressible alcohol dehydrogenase transcriptional effector)	DNA replication [GO:0006260]; DNA replication checkpoint signaling [GO:0000076]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; transcription elongation by RNA polymerase II [GO:0006368]; traversing start control point of mitotic cell cycle [GO:0007089]	hit with GO BP
GN014325	Chromosome_6A	18549	5	273	37.17720631839991	0.42678053937976257	86.96377797008283	271	0.974169741697417	91.69921875	18	0.9444444444444444	86.64379041837138	253	0.9762845849802372	93.53535353535354	24	1	methylated (>=50%)	Q8TCB7	tRNA N(3)-cytidine methyltransferase METTL6 (EC 2.1.1.-) (Methyltransferase-like protein 6) (hMETTL6)	tRNA C3-cytosine methylation [GO:0106217]; tRNA methylation [GO:0030488]; tRNA modification [GO:0006400]	hit with GO BP
GN014326	Chromosome_6A	798	1	29	51.2531328320802	0.5533715925394548	0.5121638924455826	29	0	0.5121638924455826	29	0	NA	NA	NA	3.447110510307536	40	0	unmethylated (<10%)	Q86QH9	Sperm-specific H1/protamine-like protein type 1 [Cleaved into: Sperm-specific protein OE1 (Sperm-specific linker histone H1-like protein OE1); Sperm-specific protein OE3 (Protamine-like OS3)]	nucleosome assembly [GO:0006334]	hit with GO BP
GN014327	Chromosome_6A	417	1	19	45.08393285371702	0.901672925913281	0.67453625632377745	19	0	0.67453625632377745	19	0	NA	NA	NA	4.77326968973747	31	0	unmethylated (<10%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014328	Chromosome_6A	12956	4	211	32.3247916023464	0.6235104273223557	78.46521962057768	211	0.933649289099526	89.14956011730206	9	1	78.25354403904252	202	0.9306930693069307	88.90027322404372	44	1	methylated (>=50%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014329	Chromosome_6A	6917	5	216	34.913980049154254	1.0259130117129724	0.5195428023339461	216	0	0.7178750897343862	75	0	0.46272493573264784	141	0	10.29082774049217	39	0.07692307692307693	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014330	Chromosome_6A	12598	11	142	34.164153040165104	0.3885393535652603	81.52383108796559	142	0.9436619718309859	85.42009884678748	21	1	80.90300564378528	121	0.9338842975206612	77.06422018348624	13	0.7692307692307693	methylated (>=50%)	Q925Q9	SH3 domain-containing kinase-binding protein 1 (Regulator of ubiquitous kinase) (Ruk) (SH3-containing, expressed in tumorigenic astrocytes)	actin filament organization [GO:0007015]; cell migration [GO:0016477]; positive regulation of B cell activation [GO:0050871]; regulation of apoptotic process [GO:0042981]	hit with GO BP
GN014331	Chromosome_6A	17305	8	252	36.24386015602427	0.44630678236150434	88.67466957681582	240	0.9958333333333333	91.37539718565593	48	1	88.25834441256735	192	0.9947916666666666	86.46288209606988	15	1	methylated (>=50%)	Q0U7W4	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase) (Glucose-repressible alcohol dehydrogenase transcriptional effector)	nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]	hit with GO BP
GN014332	Chromosome_6A	664	2	19	52.10843373493976	0.4337183718371837	6.557377049180328	10	0	6.557377049180328	10	0	NA	NA	NA	2.5	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014333	Chromosome_6A	4610	6	47	33.470715835141	0.36507776036664474	6.530612244897959	25	0.08	0.5830903790087464	9	0	8.34072759538598	16	0.125	0.6476683937823834	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014334	Chromosome_6A	4311	5	44	33.63488749710044	0.3618156015381798	11.363636363636363	13	0.07692307692307693	0	9	0	41.666666666666664	4	0.25	7.0552147239263805	16	0.125	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014335	Chromosome_6A	997	2	31	39.317953861584755	0.8251768789213723	1.609442060085837	27	0	1.6286644951140066	26	0	0	1	0	0.7908264136022143	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010801	Chromosome_6A	2080	5	38	35.81730769230769	0.5725295898706303	0.21242697822623474	32	0	0.2510460251046025	20	0	0.14534883720930233	12	0	1.5680323722812342	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014336	Chromosome_6A	1187	3	20	39.17438921651222	0.44410356180784194	0.9248554913294798	20	0	0.7677543186180422	13	0	1.1627906976744187	7	0	4.572564612326044	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014337	Chromosome_6A	757	2	22	38.30911492734478	0.8125487900078064	1.2035010940919038	22	0	0.9937888198757764	17	0	2.7522935779816513	5	0	1.0309278350515463	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014338	Chromosome_6A	17562	10	432	35.60528413620317	0.7786511124959665	1.2030465639605332	431	0	0.6522383634746517	78	0	1.2971877375221688	353	0	4.152340650621529	76	0	unmethylated (<10%)	Q2Q0I9	Fibronectin type III domain-containing protein 1 (Activator of G protein signaling 8)	cellular response to hypoxia [GO:0071456]; positive regulation of cardiac muscle cell apoptotic process [GO:0010666]; positive regulation of protein phosphorylation [GO:0001934]; regulation of protein transport [GO:0051223]	hit with GO BP
GN014339	Chromosome_6A	682	3	4	31.085043988269796	0.2449712643678161	73.20872274143302	4	1	78.18181818181819	3	1	62.37623762376238	1	1	90.70489844683394	38	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014340	Chromosome_6A	153	1	11	54.90196078431372	1.0935672514619883	0	11	0	0	11	0	NA	NA	NA	2.1931871208586093	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014341	Chromosome_6A	1764	2	75	41.89342403628118	0.9707241910631741	0.5287508261731659	75	0	0.5003849114703618	67	0	0.7009345794392523	8	0	0.9808102345415778	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014342	Chromosome_6A	4410	4	103	34.19501133786848	0.7989804964539007	0.5059316120027914	102	0	0.6352567496029645	40	0	0.44236273744470467	62	0	0.7400555041628122	42	0	unmethylated (<10%)	Q9ER71	Rho-related GTP-binding protein RhoJ (EC 3.6.5.2) (Tc10-like GTP-binding protein)	actin cytoskeleton organization [GO:0030036]; actin filament organization [GO:0007015]; endocytosis [GO:0006897]; establishment of cell polarity [GO:0030010]; positive regulation of cell migration involved in sprouting angiogenesis [GO:0090050]; regulation of cell shape [GO:0008360]; regulation of endothelial cell migration [GO:0010594]; regulation of sprouting angiogenesis [GO:1903670]; retina vasculature morphogenesis in camera-type eye [GO:0061299]; Rho protein signal transduction [GO:0007266]	hit with GO BP
GN014343	Chromosome_6A	7378	8	100	35.172133369476825	0.43839582068196753	84.37108886107634	100	0.94	73.11072056239016	20	0.8	86.81004948610583	80	0.975	0.5816066884769174	53	0	methylated (>=50%)	P04634	Gastric triacylglycerol lipase (GL) (Gastric lipase) (EC 3.1.1.3) (Lingual lipase)	lipid metabolic process [GO:0006629]; malate metabolic process [GO:0006108]	hit with GO BP
GN014344	Chromosome_6A	25641	13	426	38.78553878553878	0.4454248017131482	81.54601980502034	371	0.954177897574124	81.92182410423453	46	0.9565217391304348	81.48413053196245	325	0.9538461538461539	44.5014245014245	40	0.375	methylated (>=50%)	Q4R918	Kinesin-like protein KIF25	establishment of spindle orientation [GO:0051294]; microtubule-based movement [GO:0007018]; negative regulation of mitotic centrosome separation [GO:0046603]; nucleus localization [GO:0051647]; protein homotetramerization [GO:0051289]	hit with GO BP
GN014345	Chromosome_6A	19576	11	455	36.54985696771557	0.6968458911809847	66.52539329071188	427	0.7939110070257611	91.1567877629063	39	0.8974358974358975	64.52427184466019	388	0.7835051546391752	46.71841919548341	29	0.5172413793103449	methylated (>=50%)	Q3UDE2	Tubulin--tyrosine ligase-like protein 12 (Inactive tubulin--tyrosine ligase-like protein 12)	negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN014346	Chromosome_6A	3423	3	17	36.868244230207424	0.14752814116215393	72.40506329113924	17	0.7058823529411765	86.36363636363636	4	1	67.73648648648648	13	0.6153846153846154	92.13483146067416	28	1	methylated (>=50%)	Q3UDE2	Tubulin--tyrosine ligase-like protein 12 (Inactive tubulin--tyrosine ligase-like protein 12)	negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; regulation of mitotic cell cycle [GO:0007346]	hit with GO BP
GN014347	Chromosome_6A	1362	2	42	37.37151248164464	0.883595922150139	0.7843137254901961	42	0	0.7932573128408528	38	0	0.7194244604316546	4	0	0.235626767200754	59	0	unmethylated (<10%)	Q61184	Melatonin receptor type 1A (Mel-1A-R) (Mel1a receptor)	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; circadian rhythm [GO:0007623]; negative regulation of insulin secretion [GO:0046676]	hit with GO BP
GN014348	Chromosome_6A	12956	23	165	33.374498301945046	0.4589532532107019	92.47426050008171	157	0.9872611464968153	92.65683723619543	49	0.9795918367346939	92.40232372707598	108	0.9907407407407407	11.874105865522175	16	0.125	methylated (>=50%)	Q9Y5L0	Transportin-3 (Importin-12) (Imp12) (Transportin-SR) (TRN-SR)	protein import into nucleus [GO:0006606]	hit with GO BP
GN014349	Chromosome_6A	5857	9	73	35.68379716578453	0.39445625850497035	43.17046085508051	56	0.5535714285714286	38.34678405478112	31	0.45161290322580644	49.50240770465489	25	0.68	86.39896373056995	17	1	sparse (10-50%)	Q80X66	BTB/POZ domain-containing protein 10 (Glucose metabolism-related protein 1)	positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]	hit with GO BP
GN014350	Chromosome_6A	378	2	17	41.7989417989418	1.0681515957446808	7.21830985915493	17	0	6.619385342789598	14	0	8.96551724137931	3	0	0.7271468144044322	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014351	Chromosome_6A	4179	3	56	37.281646326872455	0.3874364272091545	91.78897262990877	56	0.9642857142857143	94.65387251542153	29	1	87.85310734463278	27	0.9259259259259259	71.05911330049261	26	0.7692307692307693	methylated (>=50%)	Q6DGR4	Co-chaperone protein HGH1 homolog	NA	hit, no GO BP
GN014352	Chromosome_6A	1902	5	12	32.597266035751844	0.24074933547107716	78.53535353535354	11	0.8181818181818182	70.22058823529412	4	0.75	82.88461538461539	7	0.8571428571428571	1.6326530612244898	30	0	methylated (>=50%)	Q9Z336	Dynein light chain Tctex-type 1 (Activator of G protein signaling 2) (AGS2) (T-complex testis-specific protein 1 homolog)	axon development [GO:0061564]; cardiac muscle cell apoptotic process [GO:0010659]; dendrite development [GO:0016358]; establishment of mitotic spindle orientation [GO:0000132]; intracellular protein transport [GO:0006886]; intracellular transport of viral protein in host cell [GO:0019060]; microtubule-based movement [GO:0007018]; negative regulation of mitochondrial membrane permeability [GO:0035795]; negative regulation of neurogenesis [GO:0050768]; neuron projection morphogenesis [GO:0048812]; positive regulation of neuron projection development [GO:0010976]; positive regulation of Rac protein signal transduction [GO:0035022]; regulation of cytoskeleton organization [GO:0051493]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; regulation of GTPase activity [GO:0043087]	hit with GO BP
GN014353	Chromosome_6A	2900	3	44	36.58620689655172	0.45343093706691306	89.55525606469003	44	0.9545454545454546	86.1244019138756	15	0.9333333333333333	90.90056285178237	29	0.9655172413793104	85.02890173410404	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014354	Chromosome_6A	177	1	5	48.0225988700565	0.49057649667405767	87.5912408759124	5	1	87.5912408759124	5	1	NA	NA	NA	89.05723905723906	20	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014355	Chromosome_6A	2673	4	18	33.071455293677516	0.24631026062383857	89.21404682274247	18	1	89.57264957264957	11	1	88.87070376432078	7	1	10.181451612903226	44	0.06818181818181818	methylated (>=50%)	Q3T174	Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15)	RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN014356	Chromosome_6A	18513	11	230	33.030843191270996	0.4572575906226965	67.79594137542277	230	0.782608695652174	82.8262339418526	21	0.9523809523809523	66.428878912736	209	0.7655502392344498	86.3905325443787	28	1	methylated (>=50%)	Q95K40	Coiled-coil domain-containing protein 83	NA	hit, no GO BP
GN014357	Chromosome_6A	513	1	35	48.538011695906434	1.1598837209302326	0.7867820613690008	35	0	0.7867820613690008	35	0	NA	NA	NA	1.7194323144104804	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014358	Chromosome_6A	6060	6	118	35.462046204620464	0.622112719433323	87.39529317909853	117	0.9829059829059829	89.94784257942153	39	1	86.40059127864006	78	0.9743589743589743	14.707217430776215	38	0.07894736842105263	methylated (>=50%)	Q7TQE7	Putative tyrosine carboxypeptidase MATCAP2 (EC 3.4.17.-)	NA	hit, no GO BP
GN014359	Chromosome_6A	1984	3	43	38.05443548387097	0.6063397299218195	93.82765531062124	43	1	92.60918253079507	19	1	94.50686641697878	24	1	88.30664725861233	26	1	methylated (>=50%)	Q9NZJ6	Ubiquinone biosynthesis O-methyltransferase, mitochondrial (3-demethylubiquinol 3-O-methyltransferase) (EC 2.1.1.64) (3-demethylubiquinone 3-O-methyltransferase) (EC 2.1.1.-) (Polyprenyldihydroxybenzoate methyltransferase) (EC 2.1.1.114)	glycerol metabolic process [GO:0006071]; ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN014360	Chromosome_6A	17459	11	234	35.07073715562174	0.44017719115345777	83.61972057170387	195	0.9179487179487179	92.75303643724696	35	1	81.36017628205128	160	0.9	70.8215297450425	7	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014361	Chromosome_6A	537	1	23	46.36871508379888	0.7969415408439798	3.488372093023256	23	0	3.488372093023256	23	0	NA	NA	NA	1.1597938144329898	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014362	Chromosome_6A	975	1	40	43.07692307692308	0.8908991228070176	0.800711743772242	40	0	0.800711743772242	40	0	NA	NA	NA	0.9694619486185168	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014363	Chromosome_6A	1916	2	41	38.20459290187891	0.5868694716710495	1.20415982484948	41	0	1.2658227848101267	15	0	1.1482254697286012	26	0	0.8005651047798445	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014364	Chromosome_6A	387	1	13	40.82687338501292	0.8125	0.4672897196261682	13	0	0.4672897196261682	13	0	NA	NA	NA	0.6714060031595577	63	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN002126	Chromosome_6A	432	1	8	43.28703703703704	0.40373831775700936	0	8	0	0	8	0	NA	NA	NA	0.7284768211920529	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014365	Chromosome_6A	396	1	13	43.18181818181818	0.7053987393806522	0.35398230088495575	13	0	0.35398230088495575	13	0	NA	NA	NA	0.2772963604852686	41	0	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014366	Chromosome_6A	678	1	21	38.93805309734513	0.8201612903225807	0.312256049960968	21	0	0.312256049960968	21	0	NA	NA	NA	0.7862759113652609	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014367	Chromosome_6A	534	1	19	39.325842696629216	0.9270833333333334	0.1141552511415525	19	0	0.1141552511415525	19	0	NA	NA	NA	0.5093378607809848	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014368	Chromosome_6A	393	1	15	44.020356234096695	0.7891566265060241	1.5151515151515151	15	0	1.5151515151515151	15	0	NA	NA	NA	0.602167804094741	41	0	unmethylated (<10%)	Q05A80	Caprin-2 (C1q domain-containing protein 1) (Cytoplasmic activation/proliferation-associated protein 2) (RNA granule protein 140)	negative regulation of cell growth [GO:0030308]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN014369	Chromosome_6A	678	1	19	38.64306784660767	0.7528050490883591	0.4004004004004004	19	0	0.4004004004004004	19	0	NA	NA	NA	0.46419098143236076	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014370	Chromosome_6A	10390	5	134	34.50433108758421	0.43708446272824136	71.71667486473193	133	0.8947368421052632	86.11111111111111	10	1	70.97983453981385	123	0.8861788617886179	51.27906976744186	12	0.5833333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014371	Chromosome_6A	2166	1	42	39.15050784856879	0.5214879017695919	91.25	41	0.975609756097561	91.25	41	0.975609756097561	NA	NA	NA	87.53933291378225	44	0.9772727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014372	Chromosome_6A	825	1	5	37.09090909090909	0.17658390410958905	65.64885496183206	5	0.8	65.64885496183206	5	0.8	NA	NA	NA	59.550561797752806	15	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014373	Chromosome_6A	372	1	16	47.043010752688176	0.7963607171527963	0.9259259259259259	16	0	0.9259259259259259	16	0	NA	NA	NA	0.4050073637702504	47	0	unmethylated (<10%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014374	Chromosome_6A	770	2	19	34.02597402597402	0.8557056793589518	0.30143180105501133	19	0	0.5813953488372093	5	0	0.2034587995930824	14	0	0.4893123873293845	64	0	unmethylated (<10%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014375	Chromosome_6A	2687	2	81	35.05768515072572	0.9817318231640483	0.5088495575221239	81	0	0.7575757575757576	9	0	0.48496605237633367	72	0	0.42792190425247395	54	0	unmethylated (<10%)	Q501L1	Peptidase M20 domain-containing protein 2 (Aminoacylase-1-like protein 2)	NA	hit, no GO BP
GN014376	Chromosome_6A	8658	6	278	38.24208824208824	0.8790720913007464	0.5282094465283625	278	0	0.26292725679228746	56	0	0.5843613764956869	222	0	0.6708193579300431	42	0	unmethylated (<10%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014377	Chromosome_6A	2862	2	99	38.36477987421384	0.9401197803473962	0.6141697740732617	98	0	0.6610009442870632	29	0	0.6	69	0	0.7009345794392523	62	0	unmethylated (<10%)	Q501L1	Peptidase M20 domain-containing protein 2 (Aminoacylase-1-like protein 2)	NA	hit, no GO BP
GN014378	Chromosome_6A	5720	4	177	34.52797202797203	1.038246658954985	0.6928948913681738	174	0	0.471253534401508	23	0	0.7244432519452643	151	0	0.5664877757901013	72	0	unmethylated (<10%)	A3KG59	Xaa-Arg dipeptidase (EC 3.4.13.4)	proteolysis [GO:0006508]; regulation of protein metabolic process [GO:0051246]	hit with GO BP
GN014379	Chromosome_6A	18634	12	317	35.880648277342495	0.5298802629407163	84.80946991133749	314	0.9203821656050956	65.56058320764203	41	0.6829268292682927	86.80197762164975	273	0.9560439560439561	49.25844114862733	61	0.5573770491803278	methylated (>=50%)	Q16526	Cryptochrome-1	blue light signaling pathway [GO:0009785]; circadian regulation of gene expression [GO:0032922]; circadian rhythm [GO:0007623]; entrainment of circadian clock by photoperiod [GO:0043153]; gluconeogenesis [GO:0006094]; glucose homeostasis [GO:0042593]; lipid storage [GO:0019915]; negative regulation of circadian rhythm [GO:0042754]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of G protein-coupled receptor signaling pathway [GO:0045744]; negative regulation of glucocorticoid secretion [GO:2000850]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of nuclear receptor-mediated glucocorticoid signaling pathway [GO:2000323]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of gluconeogenesis [GO:0045722]; positive regulation of protein ubiquitination [GO:0031398]; regulation of circadian rhythm [GO:0042752]; regulation of DNA damage checkpoint [GO:2000001]; response to activity [GO:0014823]; response to glucagon [GO:0033762]; response to insulin [GO:0032868]; response to light stimulus [GO:0009416]; signal transduction in response to DNA damage [GO:0042770]	hit with GO BP
GN014380	Chromosome_6A	603	1	12	45.77114427860697	0.4581196581196581	97.5975975975976	12	1	97.5975975975976	12	1	NA	NA	NA	94.16949152542372	27	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014381	Chromosome_6A	7493	8	74	37.31482717202722	0.29084635627710875	76.25643055005936	72	0.8055555555555556	66.0300925925926	26	0.7307692307692307	81.56945279615154	46	0.8478260869565217	0.667779632721202	43	0	methylated (>=50%)	Q12996	Cleavage stimulation factor subunit 3 (CF-1 77 kDa subunit) (Cleavage stimulation factor 77 kDa subunit) (CSTF 77 kDa subunit) (CstF-77)	co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway [GO:0180010]; regulation of mRNA 3'-end processing [GO:0031440]	hit with GO BP
GN014382	Chromosome_6A	8017	4	101	33.678433329175505	0.44516850843916655	86.68403908794788	99	0.9393939393939394	78.73651771956857	8	0.875	87.4181611158554	91	0.945054945054945	45.82010582010582	44	0.5	methylated (>=50%)	Q148M7	Transcription initiation factor TFIID subunit 13 (Transcription initiation factor TFIID 18 kDa subunit) (TAF(II)18) (TAFII-18) (TAFII18)	transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN014383	Chromosome_6A	273	1	3	45.78754578754579	0.2199248120300752	2.816901408450704	3	0	2.816901408450704	3	0	NA	NA	NA	2.956298200514139	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014384	Chromosome_6A	3083	3	93	35.22542977619202	0.9734963076139547	0.6781013163143199	93	0	0.528169014084507	40	0	0.7552870090634441	53	0	0.45871559633027525	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014385	Chromosome_6A	288	1	6	34.02777777777778	0.7394094993581515	0.22727272727272727	6	0	0.22727272727272727	6	0	NA	NA	NA	1.2096774193548387	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014386	Chromosome_6A	555	1	14	40.36036036036036	0.6266129032258064	0.8016032064128257	14	0	0.8016032064128257	14	0	NA	NA	NA	3.6509349955476402	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014387	Chromosome_6A	414	1	14	43.71980676328502	0.7094247246022032	0.5050505050505051	14	0	0.5050505050505051	14	0	NA	NA	NA	1.1052378664103797	50	0	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014388	Chromosome_6A	408	1	15	44.11764705882353	0.755648845536486	0.5050505050505051	15	0	0.5050505050505051	15	0	NA	NA	NA	0.6629834254143646	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014389	Chromosome_6A	600	3	20	37.833333333333336	0.9516256938937351	0.7339449541284404	20	0	0.7774538386783285	19	0	0	1	0	0.5797101449275363	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014390	Chromosome_6A	360	1	15	46.111111111111114	0.7839721254355401	0.7662835249042146	15	0	0.7662835249042146	15	0	NA	NA	NA	0.7072691552062869	33	0	unmethylated (<10%)	Q7Z5L3	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1q/TNF-related protein 10)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; regulation of synapse maturation [GO:0090128]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN020686	Chromosome_6A	820	3	7	31.463414634146343	0.3595364860632634	NA	0	NA	NA	NA	NA	NA	NA	NA	3.5294117647058822	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014391	Chromosome_6A	384	1	14	44.270833333333336	0.7466666666666667	0.13736263736263737	14	0	0.13736263736263737	14	0	NA	NA	NA	1.3293310463121784	61	0	unmethylated (<10%)	Q9BXJ4	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014392	Chromosome_6A	3129	7	37	34.32406519654842	0.4055763996174502	53.998280309544285	37	0.6486486486486487	60.57377049180328	22	0.7272727272727273	46.74502712477396	15	0.5333333333333333	27.612344342176502	27	0.3333333333333333	methylated (>=50%)	Q80Y75	DnaJ homolog subfamily B member 13 (Testis and spermatogenesis cell-related protein 6) (Testis spermatocyte apoptosis-related gene 6 protein) (Testis spermatogenesis apoptosis-related gene 3 protein) (Testis spermatogenesis apoptosis-related gene 6 protein)	axonemal central apparatus assembly [GO:1904158]; cilium movement [GO:0003341]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; flagellated sperm motility [GO:0030317]; mating [GO:0007618]; protein folding [GO:0006457]	hit with GO BP
GN014393	Chromosome_6A	33249	58	416	36.58455893410328	0.37448898463782765	74.21364730147818	416	0.8918269230769231	76.26512361914781	203	0.896551724137931	72.79726883126317	213	0.8873239436619719	24.53183520599251	33	0.3333333333333333	methylated (>=50%)	Q6ZTR5	Cilia- and flagella-associated protein 47	cilium assembly [GO:0060271]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN014394	Chromosome_6A	15347	7	259	35.98748941161139	0.5222622205380826	86.82059282371294	257	0.9299610894941635	90.40388703310052	68	0.9558823529411765	85.89381087024819	189	0.9206349206349206	1.2872379551305626	43	0	methylated (>=50%)	Q14978	Nucleolar and coiled-body phosphoprotein 1 (140 kDa nucleolar phosphoprotein) (Nopp140) (Hepatitis C virus NS5A-transactivated protein 13) (HCV NS5A-transactivated protein 13) (Nucleolar 130 kDa protein) (Nucleolar phosphoprotein p130)	mitotic cell cycle [GO:0000278]; negative regulation of protein serine/threonine kinase activity [GO:0071901]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; regulation of translation [GO:0006417]; ribosome biogenesis [GO:0042254]; rRNA processing [GO:0006364]	hit with GO BP
GN014395	Chromosome_6A	298	2	10	45.97315436241611	0.6378424657534246	0.546448087431694	10	0	0.6269592476489029	9	0	0	1	0	0.5319148936170213	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014396	Chromosome_6A	1908	1	89	42.61006289308176	1.0464651942417669	4.513184584178499	56	0	4.513184584178499	56	0	NA	NA	NA	0.49846625766871167	49	0	unmethylated (<10%)	Q5SVZ6	Zinc finger MYM-type protein 1	NA	hit, no GO BP
GN014397	Chromosome_6A	720	1	5	41.111111111111114	0.1643835616438356	53.191489361702125	5	0.8	53.191489361702125	5	0.8	NA	NA	NA	3.5175879396984926	41	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014398	Chromosome_6A	17353	12	138	35.866997061026915	0.24788668186460788	69.84469952734639	138	0.8405797101449275	73.18435754189944	69	0.8695652173913043	67.2722926129572	69	0.8115942028985508	82.11764705882354	7	1	methylated (>=50%)	Q8NG08	DNA helicase B (hDHB) (EC 5.6.2.3) (DNA 5'-3' helicase B)	DNA damage response [GO:0006974]; DNA replication [GO:0006260]; DNA replication, synthesis of primer [GO:0006269]; DNA-templated DNA replication [GO:0006261]; negative regulation of double-strand break repair via homologous recombination [GO:2000042]; regulation of DNA double-strand break processing [GO:1903775]	hit with GO BP
GN014399	Chromosome_6A	711	1	48	51.75808720112518	1.0130911033930003	0.477326968973747	48	0	0.477326968973747	48	0	NA	NA	NA	64.13825098585015	61	0.6557377049180327	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014400	Chromosome_6A	14594	7	231	33.51377278333562	0.5643776586928899	74.76098399398431	228	0.8640350877192983	84.58933107535987	17	1	74.095314560991	211	0.8530805687203792	91.2280701754386	45	1	methylated (>=50%)	A0A1L8HCK2	Cilia- and flagella-associated protein 298-A (Protein kurly-A)	regulation of cilium movement [GO:0003352]	hit with GO BP
GN014401	Chromosome_6A	13101	7	127	34.05846881917411	0.334361239323041	59.20742690868782	127	0.6299212598425197	69.61819658813972	27	0.7407407407407407	57.06648847310391	100	0.6	13.178294573643411	13	0	methylated (>=50%)	P58659	Protein eva-1 homolog C (Protein FAM176C)	NA	hit, no GO BP
GN014402	Chromosome_6A	579	1	1	55.26770293609672	0.12655737704918033	74.35897435897436	1	1	74.35897435897436	1	1	NA	NA	NA	11.570247933884298	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014403	Chromosome_6A	330	1	15	50.60606060606061	0.7130509939498704	93.10344827586206	15	1	93.10344827586206	15	1	NA	NA	NA	81.72942817294282	12	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014404	Chromosome_6A	10575	7	143	36.170212765957444	0.4134756039208717	86.27691621109004	143	0.958041958041958	95.08484493856056	39	1	84.20181968569065	104	0.9423076923076923	86.9460500963391	29	0.9655172413793104	methylated (>=50%)	Q7T0B1	Serine/threonine-protein kinase 40 (EC 2.7.11.1) (Serine/threonine-protein kinase lyk4)	regulation of MAPK cascade [GO:0043408]	hit with GO BP
GN014405	Chromosome_6A	243	1	3	48.148148148148145	0.21761194029850747	0	2	0	0	2	0	NA	NA	NA	0.8067940552016986	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014406	Chromosome_6A	252	1	7	44.84126984126984	0.6273115220483642	0.8316008316008316	7	0	0.8316008316008316	7	0	NA	NA	NA	0.38087177316969956	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014407	Chromosome_6A	12013	5	343	36.66860900690918	0.852726350861944	1.7492571647656474	343	0	1.238564391273751	113	0	2.0129351064602865	230	0	0	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014408	Chromosome_6A	901	2	17	34.295227524972255	0.6531769722814499	11.355735805330243	17	0	11.355735805330243	17	0	NA	NA	NA	0.6341789052069426	65	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014409	Chromosome_6A	1080	1	24	37.870370370370374	0.642570281124498	0.418848167539267	24	0	0.418848167539267	24	0	NA	NA	NA	0.5011389521640092	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014410	Chromosome_6A	1182	1	57	37.98646362098139	1.3491529496575754	0.2788104089219331	57	0	0.2788104089219331	57	0	NA	NA	NA	0.7759155803848541	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014411	Chromosome_6A	186	1	5	38.70967741935484	0.7181467181467182	0	5	0	0	5	0	NA	NA	NA	0.681937401643644	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014412	Chromosome_6A	753	1	31	39.309428950863214	1.065890410958904	0.759493670886076	31	0	0.759493670886076	31	0	NA	NA	NA	0.13879250520471895	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014413	Chromosome_6A	10093	9	246	34.60814425839691	0.8141485843349198	0.5921831819976313	242	0	0.7186858316221766	70	0	0.5542440726675562	172	0	1.8566493955094991	57	0	unmethylated (<10%)	P29240	5'-nucleotidase (EC 3.1.3.5) (Ecto-nucleotidase)	AMP catabolic process [GO:0006196]	hit with GO BP
GN014414	Chromosome_6A	3440	2	164	39.76744186046512	1.20627684754975	0.6032171581769437	164	0	0.7371007371007371	24	0	0.5734571272528672	140	0	0.49474335188620905	42	0	unmethylated (<10%)	Q7Z5L3	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1q/TNF-related protein 10)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; regulation of synapse maturation [GO:0090128]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN014415	Chromosome_6A	997	3	21	36.609829488465394	0.6331881691163128	0.5443234836702955	21	0	0.5738880918220947	14	0	0.5093378607809848	7	0	0.33507073715562175	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014416	Chromosome_6A	198	1	11	45.45454545454545	1.1203703703703705	0.9727626459143969	11	0	0.9727626459143969	11	0	NA	NA	NA	0.4175365344467641	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014417	Chromosome_6A	10161	4	166	36.0397598661549	0.5042805032382938	92.2189349112426	166	0.9879518072289156	93.85342789598108	8	1	92.14778223731605	158	0.9873417721518988	94.58577951728637	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014418	Chromosome_6A	3192	1	51	36.56015037593985	0.48672211824221295	92.9343726426955	51	1	92.9343726426955	51	1	NA	NA	NA	91.58653846153847	7	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014419	Chromosome_6A	4122	5	118	36.341581756428916	0.8670392256477446	0.5763262893453525	118	0	0.4076086956521739	23	0	0.623229461756374	95	0	0.46829971181556196	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014420	Chromosome_6A	2371	4	24	33.82539013074652	0.3599309284806163	1.1627906976744187	24	0	0.9771986970684039	9	0	1.2519561815336464	15	0	3.3116331729408435	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014421	Chromosome_6A	4626	5	37	33.13878080415046	0.2915370753293295	1.8709073900841908	37	0	1.5299026425591098	19	0	2.04369274136716	18	0	0.7320644216691069	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014422	Chromosome_6A	9979	7	131	36.24611684537529	0.4005835086637645	73.42290467050543	131	0.8244274809160306	83.02828618968385	33	0.9696969696969697	70.54224883566201	98	0.7755102040816326	24.476650563607084	54	0.2962962962962963	methylated (>=50%)	Q5T5N4	Uncharacterized protein C6orf118	NA	hit, no GO BP
GN014423	Chromosome_6A	1222	4	35	38.87070376432079	0.769327625283304	26.163081540770385	35	0.22857142857142856	37.33552631578947	21	0.3333333333333333	8.812260536398467	14	0.07142857142857142	0.5367856015156299	59	0	sparse (10-50%)	P42577	Soma ferritin (EC 1.16.3.1)	intracellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]	hit with GO BP
GN014424	Chromosome_6A	1314	1	52	40.03044140030441	0.9895724713242962	0.6568144499178982	52	0	0.6568144499178982	52	0	NA	NA	NA	0.6074168797953964	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014425	Chromosome_6A	783	1	25	39.59131545338442	0.8149119520419633	0.5474452554744526	25	0	0.5474452554744526	25	0	NA	NA	NA	0.7079646017699115	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014426	Chromosome_6A	9292	8	230	35.37451571244081	0.7917254766853007	0.4464562534879395	226	0	0.49298445202882063	51	0	0.43736100815418827	175	0	0.30718336483931946	67	0	unmethylated (<10%)	F4IUW3	Amino acid transporter AVT1C (AtAvt1C)	NA	hit, no GO BP
GN014427	Chromosome_6A	2043	1	86	42.04601076847773	0.9642398498468834	0.5579912315663611	86	0	0.5579912315663611	86	0	NA	NA	NA	2.4657534246575343	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014428	Chromosome_6A	6339	5	184	36.83546300678341	0.856951411971117	0.6905210295040803	184	0	0.33783783783783783	40	0	0.7917272580384553	144	0	0.5374280230326296	44	0	unmethylated (<10%)	P09108	43 kDa receptor-associated protein of the synapse (RAPsyn) (43 kDa postsynaptic protein) (Acetylcholine receptor-associated 43 kDa protein)	positive regulation of neuromuscular synaptic transmission [GO:1900075]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN014429	Chromosome_6A	324	1	4	40.74074074074074	0.3	0.6006006006006006	4	0	0.6006006006006006	4	0	NA	NA	NA	1.04	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014430	Chromosome_6A	1743	1	30	42.28341939185313	0.38847862587480125	1.7647058823529411	30	0	1.7647058823529411	30	0	NA	NA	NA	1.3274336283185841	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014431	Chromosome_6A	2825	3	80	37.27433628318584	0.815378176727808	0.5140610825521621	80	0	0.40609137055837563	25	0	0.5598621877691645	55	0	0.39447731755424065	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014432	Chromosome_6A	14555	11	183	34.125729989694264	0.43219050252298336	82.79145577764433	182	0.9175824175824175	72.45240761478163	17	0.7058823529411765	83.64920104050539	165	0.9393939393939394	0.8818342151675485	42	0	methylated (>=50%)	O46560	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)	pyridoxal 5'-phosphate salvage [GO:0009443]	hit with GO BP
GN014433	Chromosome_6A	7723	9	110	36.540204583710995	0.4278788886118729	73.24408582431688	110	0.7545454545454545	76.70157068062828	17	0.7647058823529411	72.3241235198514	93	0.7526881720430108	29.199788023317435	38	0.23684210526315788	methylated (>=50%)	Q9BUT1	Dehydrogenase/reductase SDR family member 6 (EC 1.1.1.-) ((R)-beta-hydroxybutyrate dehydrogenase) (3-hydroxybutyrate dehydrogenase type 2) (EC 1.1.1.30) (4-oxo-L-proline reductase) (EC 1.1.1.104) (Oxidoreductase UCPA) (Short chain dehydrogenase/reductase family 15C member 1)	epithelial cell differentiation [GO:0030855]; fatty acid beta-oxidation [GO:0006635]; heme metabolic process [GO:0042168]; siderophore biosynthetic process [GO:0019290]	hit with GO BP
GN014434	Chromosome_6A	4487	5	136	38.13238243815467	0.8353071940515887	0.46051509466143614	136	0	0.5148741418764302	97	0	0.38022813688212925	39	0	0.6283662477558348	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014435	Chromosome_6A	20304	10	607	36.57899921197794	0.8949155377954914	1.907939490136374	572	0	0.6912442396313364	112	0	2.106969205834684	460	0	8.127721335268506	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014436	Chromosome_6A	11776	16	281	35.869565217391305	0.7418518182235987	1.3737283730600727	279	0	0.44176706827309237	115	0	1.9205844232355367	164	0	0.5496828752642706	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014437	Chromosome_6A	453	1	7	42.60485651214128	0.3412613000430478	0.5617977528089888	7	0	0.5617977528089888	7	0	NA	NA	NA	0.7023705004389815	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002087	Chromosome_6A	655	1	12	41.06870229007634	0.43497509684560043	0.26737967914438504	12	0	0.26737967914438504	12	0	NA	NA	NA	0.211118930330753	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014438	Chromosome_6A	741	1	18	46.15384615384615	0.4583977729662852	0.2638522427440633	18	0	0.2638522427440633	18	0	NA	NA	NA	0.42122999157540014	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014439	Chromosome_6A	2129	5	76	39.502113668388915	0.9177036423653255	2.7034559643255296	75	0	3.216042376087779	57	0	1.2698412698412698	18	0	2.167832167832168	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014440	Chromosome_6A	1992	1	19	40.562248995983936	0.23190181793673065	4.979253112033195	18	0	4.979253112033195	18	0	NA	NA	NA	1.1074651353568499	40	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014441	Chromosome_6A	3396	7	84	35.129564193168434	0.8033116499112951	0.39777247414478917	83	0	0.6611570247933884	21	0	0.3143006809848088	62	0	0.5687203791469194	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014442	Chromosome_6A	4147	5	65	36.41186399807089	0.47291263515611703	89.57707418534781	64	0.984375	92.88537549407114	9	1	89.13896885632033	55	0.9818181818181818	89.749430523918	16	1	methylated (>=50%)	P91931	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]	spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]	hit with GO BP
GN014443	Chromosome_6A	11689	5	172	32.75729318162375	0.5489204834303394	73.84919328284491	172	0.8837209302325582	75.02439024390245	16	0.75	73.764124293785315	156	0.8974358974358975	72.22467934542237	45	0.7777777777777778	methylated (>=50%)	P79888	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SAMDC) (EC 4.1.1.50) [Cleaved into: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain]	spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]	hit with GO BP
GN014444	Chromosome_6A	8928	7	90	36.24551971326165	0.3071179257614883	89.34235567773314	90	1	91.15684093437153	44	1	88.22927328556807	46	1	15.083333333333334	47	0.1702127659574468	methylated (>=50%)	Q3SWY8	Zinc finger-containing ubiquitin peptidase 1 (EC 3.4.19.12) (Lys-63-specific deubiquitinase ZUFSP) (DUB) (Zinc finger with UFM1-specific peptidase domain protein)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN014445	Chromosome_6A	14415	5	212	36.10128338536247	0.4515144745613662	81.15729295426452	195	0.8512820512820513	35.8974358974359	6	0.5	82.13242837976482	189	0.8624338624338624	0.5928853754940712	53	0	methylated (>=50%)	Q5ZI57	Trafficking protein particle complex subunit 3	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]	hit with GO BP
GN014446	Chromosome_6A	762	1	8	40.026246719160106	0.2623515234980203	1.9841269841269842	8	0	1.9841269841269842	8	0	NA	NA	NA	0.6466784244562023	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014447	Chromosome_6A	3435	1	121	40.262008733624455	0.8692165162326527	1.286008230452675	121	0	1.286008230452675	121	0	NA	NA	NA	3.7468354430379747	39	0	unmethylated (<10%)	Q9V477	Toll-like receptor Tollo (Toll-like receptor 8)	axis elongation [GO:0003401]; convergent extension [GO:0060026]; peripheral nervous system neuron development [GO:0048935]; regulation of glycoprotein biosynthetic process [GO:0010559]; signal transduction [GO:0007165]	hit with GO BP
GN014448	Chromosome_6A	7213	5	110	35.311243587966175	0.48936682003774656	27.124072825354013	108	0.3333333333333333	9.254901960784315	24	0.125	32.01631951900365	84	0.39285714285714285	73.30567081604426	24	0.6666666666666666	sparse (10-50%)	Q9UTA8	Uncharacterized methyltransferase-like C25B8.10 (EC 2.1.1.-)	cellular detoxification [GO:1990748]	hit with GO BP
GN014449	Chromosome_6A	1998	2	17	40.690690690690694	0.20556053160328258	76.14379084967321	17	0.9411764705882353	75.77854671280276	16	0.9375	82.3529411764706	1	1	51.306740027510315	24	0.4583333333333333	methylated (>=50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014450	Chromosome_6A	15830	13	228	35.04737839545167	0.472194388285962	84.55278482902793	227	0.9251101321585903	90.59445178335535	78	1	82.17296284733062	149	0.8859060402684564	51.81236673773987	24	0.4583333333333333	methylated (>=50%)	P29145	PC3-like endoprotease variant B (EC 3.4.21.-) (SPC3)	protein processing [GO:0016485]	hit with GO BP
GN014451	Chromosome_6A	7176	8	246	37.38851727982163	0.9820555956100296	0.9673620457604307	245	0	0.8337816030123723	73	0	1.0281517747858018	172	0	0.23052097740894423	49	0	unmethylated (<10%)	Q9U3S9	Zinc metalloproteinase nas-6 (EC 3.4.24.-) (Nematode astacin 6)	nematode pharyngeal pumping [GO:0043050]; nematode pharynx development [GO:0160094]; proteolysis [GO:0006508]	hit with GO BP
GN014452	Chromosome_6A	735	4	16	32.38095238095238	0.8306844670481034	0.24539877300613497	16	0	0.34965034965034963	12	0	0	4	0	0.528169014084507	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014453	Chromosome_6A	327	1	21	48.01223241590214	1.1180397264734614	0.45592705167173253	21	0	0.45592705167173253	21	0	NA	NA	NA	0.5033029254482542	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014454	Chromosome_6A	10652	8	303	35.77731881336838	0.8891647478672814	2.5699600228440893	300	0	0.48348106365834004	47	0	2.960006025457558	253	0	0.6400487656202377	62	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN014455	Chromosome_6A	2724	4	32	35.79295154185022	0.3674966483131951	3.435114503816794	21	0	5.204163330664532	15	0	0.34916201117318435	6	0	11.842105263157896	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014456	Chromosome_6A	1664	2	23	36.95913461538461	0.41022123134968275	0.6802721088435374	22	0	0.6829618979151689	16	0	0.6746626686656672	6	0	0.8209606986899564	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014457	Chromosome_6A	348	1	9	46.55172413793103	0.49674861221252975	0.746268656716418	9	0	0.746268656716418	9	0	NA	NA	NA	0.4106776180698152	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014458	Chromosome_6A	12635	16	141	34.823901859912944	0.3702447911124707	88.37671161283579	140	0.9928571428571429	93.5792349726776	27	1	87.43675182031346	113	0.9911504424778761	90.5564263322884	40	1	methylated (>=50%)	Q15418	Ribosomal protein S6 kinase alpha-1 (S6K-alpha-1) (EC 2.7.11.1) (90 kDa ribosomal protein S6 kinase 1) (p90-RSK 1) (p90RSK1) (p90S6K) (MAP kinase-activated protein kinase 1a) (MAPK-activated protein kinase 1a) (MAPKAP kinase 1a) (MAPKAPK-1a) (Ribosomal S6 kinase 1) (RSK-1)	chemical synaptic transmission [GO:0007268]; hepatocyte proliferation [GO:0072574]; negative regulation of apoptotic process [GO:0043066]; negative regulation of TOR signaling [GO:0032007]; positive regulation of cell differentiation [GO:0045597]; positive regulation of cell growth [GO:0030307]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of hepatic stellate cell activation [GO:2000491]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein phosphorylation [GO:0006468]; regulation of DNA-templated transcription [GO:0006355]; regulation of translation in response to stress [GO:0043555]; signal transduction [GO:0007165]; TORC1 signaling [GO:0038202]	hit with GO BP
GN014459	Chromosome_6A	360	2	9	37.22222222222222	0.72759937121042	0.5208333333333334	9	0	0.3994673768308921	8	0	0.9569377990430622	1	0	0.4770992366412214	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014460	Chromosome_6A	2142	7	52	38.468720821662	0.6561920079178523	1.2299465240641712	49	0	0.8888888888888888	40	0	2.1153846153846154	9	0	0.25073129962390306	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014461	Chromosome_6A	1395	1	22	39.71326164874552	0.4080682906073822	44.29447852760736	22	0.36363636363636365	44.29447852760736	22	0.36363636363636365	NA	NA	NA	0.7045354469396742	60	0	sparse (10-50%)	Q0VA82	Major facilitator superfamily domain-containing protein 8	autophagosome maturation [GO:0097352]; lysosome organization [GO:0007040]	hit with GO BP
GN014462	Chromosome_6A	920	2	17	36.95652173913044	0.5438864932535818	85.13513513513513	6	1	85.13513513513513	6	1	NA	NA	NA	63.481404958677686	32	0.59375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014463	Chromosome_6A	17757	17	225	34.82570253984344	0.4194847026006146	83.9969372128637	223	0.9506726457399103	88.36285888821014	60	0.9666666666666667	82.53627631310034	163	0.9447852760736196	0.4553734061930783	33	0	methylated (>=50%)	A7S2N8	E3 UFM1-protein ligase 1 homolog (EC 2.3.2.-) (E3 UFM1-protein transferase 1 homolog)	protein ufmylation [GO:0071569]; response to endoplasmic reticulum stress [GO:0034976]; reticulophagy [GO:0061709]	hit with GO BP
GN014464	Chromosome_6A	704	2	7	33.66477272727273	0.35488981708195305	0.7125890736342043	7	0	0.872093023255814	6	0	0	1	0	0.4485981308411215	53	0	unmethylated (<10%)	A1A4I9	E3 UFM1-protein ligase 1 (EC 2.3.2.-) (E3 UFM1-protein transferase 1)	DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; erythrocyte differentiation [GO:0030218]; hematopoietic stem cell differentiation [GO:0060218]; negative regulation of IRE1-mediated unfolded protein response [GO:1903895]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell mediated immune response to tumor cell [GO:0002841]; positive regulation of autophagy [GO:0010508]; positive regulation of reticulophagy [GO:0140501]; protein K69-linked ufmylation [GO:1990592]; protein ufmylation [GO:0071569]; regulation of canonical NF-kappaB signal transduction [GO:0043122]; regulation of inflammatory response [GO:0050727]; regulation of intracellular estrogen receptor signaling pathway [GO:0033146]; rescue of stalled cytosolic ribosome [GO:0072344]; response to endoplasmic reticulum stress [GO:0034976]; reticulophagy [GO:0061709]; ribosome disassembly [GO:0032790]	hit with GO BP
GN014465	Chromosome_6A	1161	1	51	43.15245478036176	0.9436918271069744	1.4272121788772598	51	0	1.4272121788772598	51	0	NA	NA	NA	0.45931758530183725	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014466	Chromosome_6A	10948	6	187	37.71465107782243	0.482509218760974	91.73305919643622	186	0.9946236559139785	92.07533097147119	105	0.9904761904761905	91.44215530903328	81	1	89.44591029023746	10	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014467	Chromosome_6A	384	1	5	40.364583333333336	0.32967032967032966	6.474820143884892	5	0	6.474820143884892	5	0	NA	NA	NA	11.89827429609446	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014468	Chromosome_6A	59662	24	871	34.58650397237773	0.49017426344494275	78.64922513543613	811	0.8890258939580764	82.44058845718597	95	0.8842105263157894	78.22758259045621	716	0.8896648044692738	2.912621359223301	56	0	methylated (>=50%)	P70496	Phospholipase D1 (PLD 1) (rPLD1) (EC 3.1.4.4) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1)	cellular response to nutrient [GO:0031670]; defense response to Gram-positive bacterium [GO:0050830]; intracellular signal transduction [GO:0035556]; phosphatidic acid biosynthetic process [GO:0006654]; phospholipid biosynthetic process [GO:0008654]; phospholipid catabolic process [GO:0009395]; positive regulation of cell migration [GO:0030335]; positive regulation of translation [GO:0045727]; regulation of synaptic vesicle cycle [GO:0098693]; regulation of vesicle-mediated transport [GO:0060627]; response to peptide hormone [GO:0043434]	hit with GO BP
GN014469	Chromosome_6A	8160	7	111	37.291666666666664	0.3928767237370828	79.26978307363275	111	0.8918918918918919	44.995996797437954	22	0.5454545454545454	87.35133094204267	89	0.9775280898876404	60.24464831804281	50	0.5	methylated (>=50%)	Q9NYP3	Protein downstream neighbor of Son (B17)	DNA damage checkpoint signaling [GO:0000077]; DNA replication [GO:0006260]; mitotic DNA replication checkpoint signaling [GO:0033314]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; nuclear DNA replication [GO:0033260]; replication fork processing [GO:0031297]	hit with GO BP
GN014470	Chromosome_6A	5156	5	66	36.61753297129558	0.39981389578163773	83.34079713390058	66	0.8181818181818182	56.592592592592595	13	0.38461538461538464	88.10340279609602	53	0.9245283018867925	55.3072625698324	55	0.5454545454545454	methylated (>=50%)	Q9CPU4	Glutathione S-transferase 3, mitochondrial (EC 2.5.1.-) (Glutathione peroxidase MGST3) (EC 1.11.1.-) (LTC4 synthase MGST3) (EC 4.4.1.20)	arachidonate metabolic process [GO:0019369]; leukotriene biosynthetic process [GO:0019370]; lipid metabolic process [GO:0006629]; prostanoid metabolic process [GO:0006692]	hit with GO BP
GN014471	Chromosome_6A	4469	5	98	36.45110763034236	0.6601798618627129	0.6077872744539411	94	0	0.8163265306122449	15	0	0.5739514348785872	79	0	3.9722572509457756	29	0	unmethylated (<10%)	Q9CPU4	Glutathione S-transferase 3, mitochondrial (EC 2.5.1.-) (Glutathione peroxidase MGST3) (EC 1.11.1.-) (LTC4 synthase MGST3) (EC 4.4.1.20)	arachidonate metabolic process [GO:0019369]; leukotriene biosynthetic process [GO:0019370]; lipid metabolic process [GO:0006629]; prostanoid metabolic process [GO:0006692]	hit with GO BP
GN014472	Chromosome_6A	369	1	16	40.37940379403794	1.0660888407367282	0.3416856492027335	16	0	0.3416856492027335	16	0	NA	NA	NA	1.0408326661329064	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014473	Chromosome_6A	1480	6	25	35.270270270270274	0.5443017491210262	28.63157894736842	13	0	31.18811881188119	11	0	14.084507042253522	2	0	28.501628664495115	21	0.09523809523809523	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014474	Chromosome_6A	1311	2	29	36.918382913806255	0.6491872139881155	0.6747638326585695	29	0	0.9237875288683602	10	0	0.5719733079122974	19	0	0.35323207347227126	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014475	Chromosome_6A	8093	9	100	34.48659335227975	0.417572188959542	89.44762494197741	99	0.98989898989899	92.03834931221343	39	1	87.91830708661418	60	0.9833333333333333	69.7858842188739	17	0.7058823529411765	methylated (>=50%)	Q8AYK6	Wee1-like protein kinase 1-A (EC 2.7.10.2) (Zygotic wee1-like protein kinase 2) (XWee2)	mitotic cell cycle [GO:0000278]; negative regulation of G2/M transition of mitotic cell cycle [GO:0010972]	hit with GO BP
GN014476	Chromosome_6A	447	1	25	52.12527964205817	0.8345780433159073	2.2099447513812156	12	0	2.2099447513812156	12	0	NA	NA	NA	0.4914004914004914	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014477	Chromosome_6A	604	2	3	35.76158940397351	0.15929670329670328	93.0379746835443	3	1	92.85714285714286	2	1	93.24324324324324	1	1	23.240938166311302	29	0.034482758620689655	NA	NA	NA	NA	no Swiss-Prot hit
GN014478	Chromosome_6A	815	3	10	37.05521472392638	0.359347442680776	90.46653144016227	10	1	90.33232628398791	7	1	90.74074074074075	3	1	78.67078825347758	10	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014479	Chromosome_6A	49970	12	589	35.58535121072644	0.3732865436732242	57.19754205701622	579	0.6321243523316062	69.70844377129875	57	0.8245614035087719	55.9801031687546	522	0.6111111111111112	0.9218825812712276	49	0	methylated (>=50%)	O35115	Four and a half LIM domains protein 2 (FHL-2) (LIM domain protein DRAL) (Skeletal muscle LIM-protein 3) (SLIM-3)	atrial cardiac muscle cell development [GO:0055014]; heart trabecula formation [GO:0060347]; negative regulation of apoptotic process [GO:0043066]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of transcription by RNA polymerase II [GO:0000122]; osteoblast differentiation [GO:0001649]; regulation of transcription by RNA polymerase II [GO:0006357]; response to hormone [GO:0009725]; ventricular cardiac muscle cell development [GO:0055015]	hit with GO BP
GN014480	Chromosome_6A	919	3	7	33.732317736670296	0.27276967435549526	NA	0	NA	NA	NA	NA	NA	NA	NA	47.15447154471545	6	0.6666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN014481	Chromosome_6A	4694	4	57	34.02215594375799	0.4196448456825945	27.91068580542265	46	0.3695652173913043	48.54368932038835	4	0.75	26.064291920069504	42	0.3333333333333333	3.1091370558375635	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014482	Chromosome_6A	8088	5	108	37.017804154302674	0.39636984063600395	73.13307601946636	107	0.8785046728971962	72.75280898876404	22	0.9090909090909091	73.21611122469842	85	0.8705882352941177	5.8901389808074125	49	0.02040816326530612	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014483	Chromosome_6A	3361	2	84	35.88217792323713	0.7767078968219033	0.40009413979759945	80	0	0.5201560468140443	32	0	0.33198081888601993	48	0	25.101763907734057	61	0.08196721311475409	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014484	Chromosome_6A	1011	1	43	46.19188921859545	0.7975233902036324	0.26905829596412556	41	0	0.26905829596412556	41	0	NA	NA	NA	0.2846299810246679	31	0	unmethylated (<10%)	Q9LIG0	Clavaminate synthase-like protein At3g21360 (EC 1.-.-.-)	NA	hit, no GO BP
GN014485	Chromosome_6A	1434	1	17	43.09623430962343	0.260601849377305	4.3478260869565215	4	0	4.3478260869565215	4	0	NA	NA	NA	4.767879548306148	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014486	Chromosome_6A	3231	4	81	39.05911482513154	0.6574992463069038	0.2677376171352075	37	0	0.17985611510791366	28	0	0.5235602094240838	9	0	0.9411764705882353	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014487	Chromosome_6A	861	1	28	39.95354239256678	0.8158927846216326	0.6012024048096193	28	0	0.6012024048096193	28	0	NA	NA	NA	0.5721830985915493	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014488	Chromosome_6A	1636	2	52	37.775061124694375	0.8968541789660116	0.6862745098039216	52	0	0.7874015748031497	47	0	0.2570694087403599	5	0	0.7746933505487411	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014489	Chromosome_6A	1779	3	46	33.670601461495224	0.913040567679743	0.5303281405369572	46	0	0.629987400251995	38	0	0.15723270440251572	8	0	0.5390835579514824	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014490	Chromosome_6A	210	1	18	50.95238095238095	1.3263157894736841	0.7342143906020558	18	0	0.7342143906020558	18	0	NA	NA	NA	0.35657686212361334	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014491	Chromosome_6A	273	1	14	53.11355311355312	0.735	0.35714285714285715	14	0	0.35714285714285715	14	0	NA	NA	NA	0.8023842274186153	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014492	Chromosome_6A	2922	6	73	34.63381245722108	0.8338421725414467	0.5258787711043454	73	0	0.3336113427856547	28	0	0.6213753106876554	45	0	1.4967925873129009	48	0	unmethylated (<10%)	Q8BV66	Interferon-induced protein 44 (Microtubule-associated protein 44)	cellular response to virus [GO:0098586]; immune response [GO:0006955]; response to bacterium [GO:0009617]	hit with GO BP
GN014493	Chromosome_6A	474	2	5	31.434599156118143	0.4279523293607801	0.4065040650406504	5	0	0.5617977528089888	4	0	0	1	0	1.4718614718614718	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002647	Chromosome_6A	5798	8	88	35.494998275267335	0.48228020277123207	1.5048543689320388	86	0	0.9213990221887928	45	0	2.127659574468085	41	0	0.6051975792096832	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014494	Chromosome_6A	2928	6	69	33.09426229508197	0.8607068607068608	0.395703787450537	69	0	0.35913806863527536	35	0	0.42841842199214564	34	0	0.6607929515418502	56	0	unmethylated (<10%)	Q8BV66	Interferon-induced protein 44 (Microtubule-associated protein 44)	cellular response to virus [GO:0098586]; immune response [GO:0006955]; response to bacterium [GO:0009617]	hit with GO BP
GN014495	Chromosome_6A	16356	13	400	34.647835656639764	0.8155326154459065	0.8689757179834833	380	0	0.7407407407407407	47	0	0.887261460460531	333	0	0.5767844268204758	33	0	unmethylated (<10%)	P17276	Protein henna (EC 1.14.16.1) (EC 1.14.16.4) (Phe-4-monooxygenase) (Phenylalanine-4-hydroxylase) (PAH) (Tryptophan 5-hydroxylase) (TRH) (Tryptophan 5-monooxygenase)	dopamine biosynthetic process [GO:0042416]; eye pigment biosynthetic process [GO:0006726]; germ-band extension [GO:0007377]; L-phenylalanine catabolic process [GO:0006559]; L-tyrosine biosynthetic process [GO:0006571]; long-term memory [GO:0007616]; serotonin biosynthetic process [GO:0042427]	hit with GO BP
GN014496	Chromosome_6A	4686	4	125	35.253947930004266	0.8585688320825516	0.6554573952693075	125	0	1.0396975425330812	22	0	0.587248322147651	103	0	0.6593963986812073	60	0	unmethylated (<10%)	Q9H628	Ras-related and estrogen-regulated growth inhibitor-like protein (EC 3.6.5.2) (RERG/Ras-like protein)	NA	hit, no GO BP
GN014497	Chromosome_6A	7399	11	82	34.464116772536826	0.3781802632784582	83.62175525339926	81	0.9382716049382716	85.289345592212	28	1	82.595673876871885	53	0.9056603773584906	93.78980891719745	18	1	methylated (>=50%)	Q16543	Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37) [Cleaved into: Hsp90 co-chaperone Cdc37, N-terminally processed]	positive regulation of type 2 mitophagy [GO:1905091]; post-transcriptional regulation of gene expression [GO:0010608]; protein folding [GO:0006457]; protein maturation [GO:0051604]; protein stabilization [GO:0050821]; protein targeting [GO:0006605]; regulation of cyclin-dependent protein serine/threonine kinase activity [GO:0000079]; regulation of type I interferon-mediated signaling pathway [GO:0060338]; regulation of type II interferon-mediated signaling pathway [GO:0060334]	hit with GO BP
GN014498	Chromosome_6A	1437	1	31	42.72790535838553	0.47466675190998303	62.32449297971919	31	0.6129032258064516	62.32449297971919	31	0.6129032258064516	NA	NA	NA	65.14423076923077	46	0.6956521739130435	methylated (>=50%)	Q60HD1	Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1)	ceramide biosynthetic process [GO:0046513]; regulation of fat cell apoptotic process [GO:1904649]; sphingolipid metabolic process [GO:0006665]; sphingosine biosynthetic process [GO:0046512]	hit with GO BP
GN014499	Chromosome_6A	1026	1	18	39.57115009746589	0.44868804664723033	51.57750342935528	18	0.6111111111111112	51.57750342935528	18	0.6111111111111112	NA	NA	NA	16.120218579234972	29	0.10344827586206896	methylated (>=50%)	Q00472	Phosphoglycolate phosphatase (EC 3.1.3.18)	cellular detoxification [GO:1990748]	hit with GO BP
GN014500	Chromosome_6A	6211	4	75	35.35662534213492	0.3872854476448605	84.60200086994345	75	1	92.10191082802548	28	1	80.71334214002643	47	1	86.18581907090464	17	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014501	Chromosome_6A	7343	6	90	35.76195015661174	0.38392139275274084	93.4009057580332	88	1	95.43039319872476	24	1	92.88419913419914	64	1	3.0279898218829517	51	0.0392156862745098	methylated (>=50%)	Q99MZ3	Carbohydrate-responsive element-binding protein (ChREBP) (MLX interactor) (MLX-interacting protein-like) (Williams-Beuren syndrome chromosomal region 14 protein homolog)	cellular response to glucose stimulus [GO:0071333]; energy homeostasis [GO:0097009]; fatty acid homeostasis [GO:0055089]; glucose homeostasis [GO:0042593]; glucose mediated signaling pathway [GO:0010255]; lipid biosynthetic process [GO:0008610]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of oxidative phosphorylation [GO:0090324]; negative regulation of signal transduction by p53 class mediator [GO:1901797]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of fatty acid biosynthetic process [GO:0045723]; positive regulation of glycolytic process [GO:0045821]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of lipid biosynthetic process [GO:0046889]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of transcription from RNA polymerase II promoter by glucose [GO:0000432]; regulation of glycolytic process [GO:0006110]; regulation of transcription by RNA polymerase II [GO:0006357]; response to glucose [GO:0009749]	hit with GO BP
GN014502	Chromosome_6A	17472	20	281	36.618589743589745	0.48121262910280443	86.32626310772164	278	0.960431654676259	83.7972166998012	66	0.9545454545454546	86.88072061601046	212	0.9622641509433962	13.949044585987261	25	0.12	methylated (>=50%)	Q5R9B8	DDB1- and CUL4-associated factor 6 (IQ motif and WD repeat-containing protein 1) (Nuclear receptor interaction protein) (NRIP)	positive regulation of transcription by RNA polymerase II [GO:0045944]; protein ubiquitination [GO:0016567]	hit with GO BP
GN014503	Chromosome_6A	282	1	14	52.12765957446808	0.7365671641791045	0.6201550387596899	14	0	0.6201550387596899	14	0	NA	NA	NA	0.44506258692628653	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014504	Chromosome_6A	1413	3	25	37.933474876150036	0.5019181585677749	4.437400950871632	24	0	6.614785992217898	11	0	2.9411764705882355	13	0	5.048766494549627	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014505	Chromosome_6A	5969	6	141	37.2424191656894	0.6853935420823324	68.5720139315714	141	0.9574468085106383	64.74268731424996	82	0.9512195121951219	75.83852775304244	59	0.9661016949152542	73.459209120057	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014506	Chromosome_6A	1005	1	44	42.288557213930346	0.9794019933554817	0.4798464491362764	42	0	0.4798464491362764	42	0	NA	NA	NA	64.52268111035883	31	0.7741935483870968	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014507	Chromosome_6A	10046	5	135	33.96376667330281	0.46643190478008356	83.78739965945026	132	0.946969696969697	80.14842300556586	18	0.8888888888888888	84.33650615901456	114	0.956140350877193	0.5177220230983672	69	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014508	Chromosome_6A	1795	3	64	39.33147632311978	0.9281882231271411	0.57636887608069165	64	0	0.7207207207207207	15	0	0.5336179295624333	49	0	0.4914004914004914	55	0	unmethylated (<10%)	Q6NUC1	Cornifelin homolog A	NA	hit, no GO BP
GN014509	Chromosome_6A	4534	3	113	35.64181737979709	0.7874249794437913	2.133502323616392	96	0	1.4749262536873156	10	0	2.1843003412969284	86	0	1.3340744858254585	40	0	unmethylated (<10%)	Q3ZCB2	Placenta-specific gene 8 protein	positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN013185	Chromosome_6A	1495	3	24	37.725752508361204	0.45420596240268374	4.679144385026738	20	0.1	5.769230769230769	15	0.13333333333333333	2.857142857142857	5	0	0.6799163179916318	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014510	Chromosome_6A	23527	5	562	35.890678794576445	0.7419992717032352	0.9294716882923746	507	0	0.5012531328320802	32	0	0.9494163424124513	475	0	1.412180052956752	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014511	Chromosome_6A	2476	2	90	38.69143780290791	0.971247008982858	0.6422173398681764	89	0	0.6203473945409429	85	0	1.0909090909090908	4	0	1.3043478260869565	15	0	unmethylated (<10%)	O22943	Probable glycosyltransferase STELLO1 (EC 2.4.-.-)	intracellular protein localization [GO:0008104]; plant-type cell wall cellulose biosynthetic process [GO:0052324]; regulation of plant-type cell wall cellulose biosynthetic process [GO:2001009]	hit with GO BP
GN014512	Chromosome_6A	2517	2	77	38.45848232022249	0.8275645624103299	0.9550215650030807	77	0	0.87890625	28	0	0.9900990099009901	49	0	0.7638888888888888	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014513	Chromosome_6A	1070	2	30	38.504672897196265	0.7594577329831783	0.3508771929824561	30	0	0.4132231404958678	18	0	0.2861230329041488	12	0	0.6834910620399579	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014514	Chromosome_6A	1966	2	54	39.21668362156663	0.7227547519198301	1.142263759086189	53	0	0.8736559139784946	45	0	2.0547945205479454	8	0	1.200960768614892	54	0	unmethylated (<10%)	Q23157	Innexin-11 (Protein opu-11)	NA	hit, no GO BP
GN014515	Chromosome_6A	996	2	17	41.566265060240966	0.3981657848324515	0.7692307692307693	16	0	0.7168458781362007	12	0	0.9009009009009009	4	0	0.5007153075822603	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014516	Chromosome_6A	189	1	7	46.560846560846564	0.7011128775834659	0.7246376811594203	7	0	0.7246376811594203	7	0	NA	NA	NA	0.6916289053183878	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014517	Chromosome_6A	393	1	20	49.36386768447837	0.838578896831324	19.241192411924118	14	0	19.241192411924118	14	0	NA	NA	NA	0.8074382187423538	68	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014518	Chromosome_6A	510	1	11	47.450980392156865	0.4356604799254485	0.47095761381475665	11	0	0.47095761381475665	11	0	NA	NA	NA	3.1561461794019934	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014519	Chromosome_6A	678	1	4	47.935103244837755	0.21523809523809523	0	1	0	0	1	0	NA	NA	NA	0.6063668519454269	32	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014520	Chromosome_6A	438	1	24	46.80365296803653	1.0024794964714858	0.5194805194805194	23	0	0.5194805194805194	23	0	NA	NA	NA	0.510899182561308	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014521	Chromosome_6A	2151	1	89	39.19107391910739	1.0783473215794515	0.7672634271099744	89	0	0.7672634271099744	89	0	NA	NA	NA	6.114050558495003	53	0	unmethylated (<10%)	G5EFX6	Slit homolog 1 protein (Slt-1)	axon guidance [GO:0007411]; axon midline choice point recognition [GO:0016199]; dorsal/ventral axon guidance [GO:0033563]; negative regulation of axon extension involved in axon guidance [GO:0048843]; neuron migration [GO:0001764]; regulation of sensory neuron axon guidance [GO:1905489]; sensory neuron axon guidance [GO:0097374]	hit with GO BP
GN014522	Chromosome_6A	2157	1	90	39.360222531293466	1.0773029966703662	0.5123825789923142	90	0	0.5123825789923142	90	0	NA	NA	NA	0.7898200965335673	55	0	unmethylated (<10%)	G5EFX6	Slit homolog 1 protein (Slt-1)	axon guidance [GO:0007411]; axon midline choice point recognition [GO:0016199]; dorsal/ventral axon guidance [GO:0033563]; negative regulation of axon extension involved in axon guidance [GO:0048843]; neuron migration [GO:0001764]; regulation of sensory neuron axon guidance [GO:1905489]; sensory neuron axon guidance [GO:0097374]	hit with GO BP
GN014523	Chromosome_6A	12089	14	376	38.37372818264538	0.8451020135730538	0.7961887358872284	365	0	0.6233062330623306	103	0	0.8510272500644718	262	0	0.5744925315970892	50	0	unmethylated (<10%)	Q91755	Glutamate receptor ionotropic, kainate 2 (GluK2) (Glutamate receptor 6) (GluR-6) (GluR6)	detection of cold stimulus involved in thermoception [GO:0120169]; modulation of chemical synaptic transmission [GO:0050804]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN014524	Chromosome_6A	381	1	17	43.044619422572175	0.9921875	25.857519788918207	17	0.058823529411764705	25.857519788918207	17	0.058823529411764705	NA	NA	NA	5.83058305830583	36	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014525	Chromosome_6A	22643	18	595	34.64646910745043	0.8772384986277465	0.6784395889454256	589	0	0.4942106749505789	111	0	0.7179642532565889	478	0	0.4139834406623735	33	0	unmethylated (<10%)	Q9UGM3	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Deleted in malignant brain tumors 1 protein) (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)	defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; epithelial cell differentiation [GO:0030855]; induction of bacterial agglutination [GO:0043152]; innate immune response [GO:0045087]	hit with GO BP
GN014526	Chromosome_6A	8899	7	134	36.08270592201371	0.46390610350555733	86.7966991747937	131	0.9541984732824428	71.93973634651601	21	0.7619047619047619	89.07151095732411	110	0.990909090909091	0.8098380323935213	49	0	methylated (>=50%)	Q86SQ9	Dehydrodolichyl diphosphate synthase complex subunit DHDDS (EC 2.5.1.87) (Cis-isoprenyltransferase) (CIT) (Cis-IPTase) (Cis-prenyltransferase subunit hCIT) (Epididymis tissue protein Li 189m)	dolichyl diphosphate biosynthetic process [GO:0006489]; dolichyl monophosphate biosynthetic process [GO:0043048]; polyprenol biosynthetic process [GO:0016094]	hit with GO BP
GN014527	Chromosome_6A	45534	35	685	35.60855624368604	0.47499604357657754	82.42474244251233	652	0.9386503067484663	87.04022988505747	141	0.9432624113475178	81.62784351665799	511	0.9373776908023483	19.81390257252326	29	0.13793103448275862	methylated (>=50%)	Q921C3	Bromodomain and WD repeat-containing protein 1 (WD repeat-containing protein 9)	cytoskeleton organization [GO:0007010]; regulation of cell shape [GO:0008360]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN014528	Chromosome_6A	4262	4	60	35.969028625058655	0.43635246740836803	76.74786459981019	60	0.9	87.00440528634361	33	0.9696969696969697	68.98276820455808	27	0.8148148148148148	0.4088934321492461	51	0	methylated (>=50%)	Q3UHX9	28S rRNA (uridine-N(3))-methyltransferase (EC 2.1.1.-) (Centromere protein 32) (CENP-32) (Kinetochore-associated protein) (Methyltransferase C9orf114 homolog) (SPOUT domain-containing methyltransferase 1)	maintenance of centrosome location [GO:0051661]; miRNA processing [GO:0035196]; post-transcriptional regulation of gene expression [GO:0010608]; rRNA base methylation [GO:0070475]	hit with GO BP
GN014529	Chromosome_6A	741	1	36	42.91497975708502	1.0585714285714285	0.46320123520329387	36	0	0.46320123520329387	36	0	NA	NA	NA	0.356718192627824	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014530	Chromosome_6A	443	2	11	39.503386004514674	0.6389981641751902	1.0526315789473684	11	0	0.9868421052631579	9	0	1.3157894736842106	2	0	0.6309148264984227	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014531	Chromosome_6A	3872	7	114	37.06095041322314	0.858426389423694	0.6442376521116678	114	0	0.9941520467836257	35	0	0.48994326972666324	79	0	1.4279885760913913	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014532	Chromosome_6A	792	2	31	40.4040404040404	0.9811381074168798	1.4749262536873156	31	0	1.4437689969604863	30	0	2.5	1	0	1.4198782961460445	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014533	Chromosome_6A	474	1	23	40.71729957805907	1.1722580645161291	1.023890784982935	23	0	1.023890784982935	23	0	NA	NA	NA	0.7905138339920948	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014534	Chromosome_6A	291	1	15	45.36082474226804	1.0078503809743709	0.4366812227074236	15	0	0.4366812227074236	15	0	NA	NA	NA	0.8464794151596768	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014535	Chromosome_6A	424	2	13	36.79245283018868	0.9061318428407036	0.5059021922428331	13	0	0.5545286506469501	12	0	0	1	0	0.8990110878034162	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014536	Chromosome_6A	786	2	31	40.83969465648855	0.9631591430152581	0.5520504731861199	31	0	0.5672609400324149	30	0	0	1	0	0.6197593875318994	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014537	Chromosome_6A	4562	4	90	34.30512932924156	0.6705689824689769	60.61133681563165	90	0.7333333333333333	83.21513002364067	8	0.875	59.646999495713565	82	0.7195121951219512	40.12409513960703	15	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014538	Chromosome_6A	1560	3	34	41.85897435897436	0.5003679175864606	50.09733939000649	34	0.4411764705882353	51.293103448275865	21	0.47619047619047616	48.28711256117455	13	0.38461538461538464	0.24647887323943662	44	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014539	Chromosome_6A	13667	5	144	33.16016682519938	0.38375806983758537	80.31687995124923	143	0.9300699300699301	60.03616636528029	8	0.75	81.34260106091092	135	0.9407407407407408	3.965736040609137	64	0	methylated (>=50%)	Q32PF3	PEST proteolytic signal-containing nuclear protein (PCNP) (PEST-containing nuclear protein)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN014540	Chromosome_6A	1992	1	19	41.0140562248996	0.2269064748201439	15.749235474006117	19	0	15.749235474006117	19	0	NA	NA	NA	27.257336343115124	11	0	sparse (10-50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014541	Chromosome_6A	2770	5	96	42.12996389891697	0.8034662170736571	0.6373937677053825	42	0	0.5434782608695652	23	0	0.6976744186046512	19	0	0	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014542	Chromosome_6A	4029	1	0	60.833953834698434	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0297482837528604	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014543	Chromosome_6A	3234	7	91	36.70377241805813	0.8467673716012084	0.39867109634551495	91	0	0.5113636363636364	39	0	0.32667876588021777	52	0	6.588921282798834	39	0	unmethylated (<10%)	Q9CW42	Mitochondrial amidoxime-reducing component 1 (mARC1) (EC 1.7.-.-) (Molybdenum cofactor sulfurase C-terminal domain-containing protein 1) (MOSC domain-containing protein 1) (Moco sulfurase C-terminal domain-containing protein 1)	cellular detoxification of nitrogen compound [GO:0070458]; nitrate metabolic process [GO:0042126]; nitric oxide biosynthetic process [GO:0006809]	hit with GO BP
GN014544	Chromosome_6A	1023	1	23	40.37145650048876	0.5549030706098769	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014545	Chromosome_6A	1176	1	8	37.074829931972786	0.19802980550644103	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014546	Chromosome_6A	5670	3	62	32.38095238095238	0.41775450713548085	62.30445246690734	61	0.7377049180327869	57.85123966942149	11	0.5454545454545454	63.548883756735954	50	0.78	42.10526315789474	48	0.4583333333333333	methylated (>=50%)	P82931	Small ribosomal subunit protein bS6m (28S ribosomal protein S6, mitochondrial) (MRP-S6) (S6mt)	mitochondrial translation [GO:0032543]	hit with GO BP
GN014547	Chromosome_6A	189	1	6	44.44444444444444	0.6461538461538462	0.8403361344537815	6	0	0.8403361344537815	6	0	NA	NA	NA	0.7716049382716049	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014548	Chromosome_6A	279	1	12	45.16129032258065	0.8873575404187649	0	12	0	0	12	0	NA	NA	NA	0.7155635062611807	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014549	Chromosome_6A	306	2	18	42.48366013071895	1.3148722845547864	0.39603960396039606	18	0	0.45248868778280543	16	0	0	2	0	0.32894736842105265	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014550	Chromosome_6A	4063	2	80	36.03248830913118	0.6139502553718759	0.7778738115816768	77	0	0.6740196078431373	32	0	0.8700380641653073	45	0	7.13436385255648	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014551	Chromosome_6A	878	2	34	41.913439635535305	0.8817604489735638	0.39184952978056425	34	0	0.4152823920265781	32	0	0	2	0	2.0080321285140563	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014552	Chromosome_6A	1473	1	59	43.10930074677529	0.8621213023034343	0.5430566330488751	56	0	0.5430566330488751	56	0	NA	NA	NA	0.6553795740032768	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014553	Chromosome_6A	42517	45	966	34.24982947997272	0.7748588058795918	2.2923013276166837	959	0	0.5672823218997362	130	0	2.579060485108996	829	0	0.5362888809438684	46	0	unmethylated (<10%)	Q9HAR2	Adhesion G protein-coupled receptor L3 (Calcium-independent alpha-latrotoxin receptor 3) (CIRL-3) (Latrophilin-3) (Lectomedin-3)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion [GO:0098609]; excitatory synapse assembly [GO:1904861]; G protein-coupled receptor signaling pathway [GO:0007186]; neuron migration [GO:0001764]; Rho-activating G protein-coupled receptor signaling pathway [GO:0160221]; synapse assembly [GO:0007416]	hit with GO BP
GN014554	Chromosome_6A	1485	1	60	43.16498316498316	0.872502937720329	10.46131492916818	60	0.016666666666666666	10.46131492916818	60	0.016666666666666666	NA	NA	NA	0.5385029617662898	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014555	Chromosome_6A	9798	11	149	35.762400489895896	0.47927001620107057	85.9408704479127	149	0.9328859060402684	82.26415094339623	49	0.9183673469387755	87.29387259156397	100	0.94	0.6319590731266927	57	0	methylated (>=50%)	O61577	Katanin p60 ATPase-containing subunit A1 (Katanin p60 subunit A1) (EC 5.6.1.1) (p60 katanin)	microtubule severing [GO:0051013]	hit with GO BP
GN014556	Chromosome_6A	33864	14	383	34.727143869596034	0.3780531680443742	62.330186507022795	383	0.6892950391644909	84.79212253829321	109	0.9357798165137615	56.342957130358705	274	0.5912408759124088	10.443571027512633	35	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014557	Chromosome_6A	897	1	32	44.81605351170568	0.7122403910572939	0.7675438596491229	32	0	0.7675438596491229	32	0	NA	NA	NA	0.4424778761061947	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014558	Chromosome_6A	1275	1	50	40.705882352941174	0.9515209409236096	0.6593406593406593	50	0	0.6593406593406593	50	0	NA	NA	NA	0.3904863329783458	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014559	Chromosome_6A	2064	1	93	43.798449612403104	0.9400011752952929	0.7807807807807807	93	0	0.7807807807807807	93	0	NA	NA	NA	0.3976143141153082	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014560	Chromosome_6A	18491	11	317	34.957546914715266	0.5631140217014657	75.48009870185602	317	0.832807570977918	69.51768488745981	35	0.6285714285714286	76.02270732135541	282	0.8581560283687943	52.33521033454787	44	0.5227272727272727	methylated (>=50%)	B5XB27	Kynurenine formamidase (KFA) (KFase) (EC 3.5.1.9) (Arylformamidase) (N-formylkynurenine formamidase) (FKF)	'de novo' NAD+ biosynthetic process from L-tryptophan [GO:0034354]	hit with GO BP
GN018795	Chromosome_6A	811	3	25	35.88162762022195	0.9577231931979215	0.5181347150259067	25	0	0.51440329218107	22	0	0.5376344086021505	3	0	2.2689904636632687	69	0	unmethylated (<10%)	Q6R6I7	Relaxin receptor 1 (Leucine-rich repeat-containing G protein-coupled receptor 7) (Relaxin family peptide receptor 1)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; cell differentiation [GO:0030154]; extracellular matrix organization [GO:0030198]; hormone-mediated signaling pathway [GO:0009755]; lung connective tissue development [GO:0060427]; nipple morphogenesis [GO:0060658]; parturition [GO:0007567]	hit with GO BP
GN014561	Chromosome_6A	2642	2	88	37.698713096139286	0.9384374445000565	0.7509386733416771	79	0	0.5424954792043399	35	0	1.0095344924284912	44	0	0.9259259259259259	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014562	Chromosome_6A	333	1	16	48.948948948948946	0.8028933092224232	0.38095238095238093	16	0	0.38095238095238093	16	0	NA	NA	NA	0.5239822652156388	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014563	Chromosome_6A	1575	1	9	36.25396825396825	0.17418712674187126	1.0025062656641603	6	0	1.0025062656641603	6	0	NA	NA	NA	1.2396694214876034	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014564	Chromosome_6A	1934	2	36	38.934850051706306	0.4998061765085928	1.9572953736654803	29	0	4.368932038834951	13	0	0.5617977528089888	16	0	1.1452368558042687	63	0	unmethylated (<10%)	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN014565	Chromosome_6A	5312	5	148	36.78463855421687	0.8244044591764722	0.6022368798394035	148	0	0.35	44	0	0.7036590269400884	104	0	1.1152416356877324	61	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN014566	Chromosome_6A	1209	4	29	36.39371381306865	0.736328125	0.3568242640499554	29	0	0.3787878787878788	22	0	0.303951367781155	7	0	0.5128205128205128	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014567	Chromosome_6A	351	1	15	50.997150997150996	0.6647727272727273	0.5012531328320802	14	0	0.5012531328320802	14	0	NA	NA	NA	0.6842923794712286	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014568	Chromosome_6A	1785	3	60	35.12605042016807	1.0901872964169381	0.6857142857142857	60	0	1.288659793814433	18	0	0.5139500734214391	42	0	0.3508771929824561	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014569	Chromosome_6A	567	1	13	36.860670194003525	0.6776061776061776	0.21008403361344538	13	0	0.21008403361344538	13	0	NA	NA	NA	0.5202312138728323	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014570	Chromosome_6A	2013	6	45	35.17138599105812	0.7256552806972572	0.7138607971445569	45	0	0.8500772797527048	36	0	0.25839793281653745	9	0	1.1764705882352942	54	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN014571	Chromosome_6A	513	2	8	43.27485380116959	0.33482907726197275	2.978723404255319	8	0	3.5175879396984926	7	0	0	1	0	1.2016021361815754	30	0	unmethylated (<10%)	Q8BR93	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN014572	Chromosome_6A	1843	2	35	34.99728703201302	0.6212918015102481	17.319787131107887	29	0	20.428015564202333	11	0	16.291049581455248	18	0	3.7774725274725274	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014573	Chromosome_6A	1027	2	26	37.00097370983447	0.7417222222222222	0.6493506493506493	22	0	0.78125	15	0	0.5181347150259067	7	0	0.41109969167523125	51	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN014574	Chromosome_6A	1942	5	47	36.04531410916581	0.7498931939925729	0.5206073752711496	47	0	0.5703422053231939	35	0	0.4126547455295736	12	0	0.5096262740656852	51	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN014575	Chromosome_6A	12747	17	188	35.27104416725504	0.48044333885061014	88.87737478411053	187	0.9625668449197861	87.32510288065843	48	0.9375	89.2896174863388	139	0.9712230215827338	0.37821482602118	45	0	methylated (>=50%)	Q56A18	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (BRG1-associated factor 57) (BAF57)	chromatin remodeling [GO:0006338]; negative regulation of DNA-templated transcription [GO:0045892]; neurogenesis [GO:0022008]; spermatid development [GO:0007286]	hit with GO BP
GN014576	Chromosome_6A	11648	10	243	33.542239010989015	0.7455609518646767	0.6904487917146145	232	0	0.727802037845706	40	0	0.6828302820385947	192	0	3.253355022366816	46	0	unmethylated (<10%)	O95935	T-box transcription factor TBX18 (T-box protein 18)	cell fate specification [GO:0001708]; cochlea morphogenesis [GO:0090103]; morphogenesis of embryonic epithelium [GO:0016331]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neural plate anterior/posterior regionalization [GO:0021999]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of SA node cell action potential [GO:0098907]; regulation of transcription by RNA polymerase II [GO:0006357]; sinoatrial node cell development [GO:0060931]; sinoatrial node cell fate commitment [GO:0060930]; sinoatrial node development [GO:0003163]; smooth muscle cell differentiation [GO:0051145]; somitogenesis [GO:0001756]; ureter development [GO:0072189]	hit with GO BP
GN014577	Chromosome_6A	8852	5	250	34.92995933122458	0.9265481371693179	0.45628764373060776	239	0	0.34737299174989145	30	0	0.4852686308492201	209	0	0.5530417295123178	43	0	unmethylated (<10%)	Q9WTS8	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of interleukin-8 production [GO:0032757]	hit with GO BP
GN014578	Chromosome_6A	567	1	12	39.682539682539684	0.552541822316063	0	12	0	0	12	0	NA	NA	NA	0.7992895204262878	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014579	Chromosome_6A	276	1	8	47.10144927536232	0.523719165085389	0.8064516129032258	8	0	0.8064516129032258	8	0	NA	NA	NA	2.2831050228310503	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003157	Chromosome_6A	612	1	20	40.52287581699346	0.7960975609756098	0.437636761487965	20	0	0.437636761487965	20	0	NA	NA	NA	0.7469244288224957	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014580	Chromosome_6A	11825	2	328	36.651162790697676	0.8279002336033661	0.9023193847271846	325	0	0.7683863885839737	73	0	0.9288824383164006	252	0	0.5796217205613179	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014581	Chromosome_6A	12391	9	419	37.94689694132838	0.9394382545994092	0.9102591561362176	401	0	0.7306380905991232	51	0	0.9324430006617337	350	0	0.42042042042042044	53	0	unmethylated (<10%)	P40873	Monomeric sarcosine oxidase (MSOX) (EC 1.5.3.1)	NA	hit, no GO BP
GN014582	Chromosome_6A	6369	4	180	37.99654576856649	0.7830250988497299	0.9653961885656971	180	0	2.3923444976076556	34	0	0.699196667658435	146	0	0.6232471174820816	51	0	unmethylated (<10%)	Q2QKL5	Glutathione gamma-glutamylcysteinyltransferase 3 (EC 2.3.2.15) (LjPCS3-7N) (Phytochelatin synthase 3)	cellular detoxification of cadmium ion [GO:0098849]; detoxification of copper ion [GO:0010273]; phytochelatin biosynthetic process [GO:0046938]	hit with GO BP
GN014583	Chromosome_6A	4663	6	116	37.250696976195584	0.7200470706005762	1.1327879169288861	116	0	0.8480565371024735	33	0	1.214329083181542	83	0	1.2593467138921683	44	0	unmethylated (<10%)	O62640	Putative inhibitor of apoptosis	negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of cell cycle [GO:0051726]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN014584	Chromosome_6A	2710	3	67	33.505535055350556	0.8810656055900621	0.4609238963433371	63	0	0.5996573386636208	22	0	0.3833253473885961	41	0	0.7808244053023424	64	0	unmethylated (<10%)	P11602	Lipoprotein lipase (LPL) (EC 3.1.1.34) (Phospholipase A1) (EC 3.1.1.32)	cholesterol homeostasis [GO:0042632]; chylomicron remodeling [GO:0034371]; fatty acid biosynthetic process [GO:0006633]; fatty acid metabolic process [GO:0006631]; high-density lipoprotein particle remodeling [GO:0034375]; low-density lipoprotein particle mediated signaling [GO:0055096]; positive regulation of adipose tissue development [GO:1904179]; positive regulation of chemokine production [GO:0032722]; positive regulation of cholesterol storage [GO:0010886]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of inflammatory response [GO:0050729]; positive regulation of triglyceride transport [GO:1905885]; triglyceride catabolic process [GO:0019433]; triglyceride homeostasis [GO:0070328]; very-low-density lipoprotein particle remodeling [GO:0034372]	hit with GO BP
GN014585	Chromosome_6A	36465	16	402	34.1066776360894	0.3800032662964864	74.07807854191606	391	0.8388746803069054	79.37625754527163	45	0.9111111111111111	73.63754234806976	346	0.8294797687861272	13.964686998394864	56	0.07142857142857142	methylated (>=50%)	Q6DDJ5	WD repeat and coiled-coil-containing protein	NA	hit, no GO BP
GN014586	Chromosome_6A	19729	17	380	36.69724770642202	0.5752760561873702	88.0470694727314	362	0.9502762430939227	91.2978912978913	72	0.9722222222222222	87.46262281076463	290	0.9448275862068966	41.11866969009826	33	0.6060606060606061	methylated (>=50%)	Q6DID3	SR-related and CTD-associated factor 8 (RNA-binding motif protein 16)	mRNA processing [GO:0006397]; negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled [GO:2000805]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; termination of RNA polymerase II transcription [GO:0006369]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN014587	Chromosome_6A	3932	3	42	35.50356052899288	0.3390072669047912	88.74172185430463	42	1	92.15500945179583	26	1	85.74979287489644	16	1	76.98237885462555	25	1	methylated (>=50%)	Q6DE40	Glycoprotein endo-alpha-1,2-mannosidase (EC 3.2.1.130)	NA	hit, no GO BP
GN014588	Chromosome_6A	7640	5	119	34.60732984293194	0.5203397581217953	85.5635821580094	119	0.8823529411764706	77.83783783783784	17	0.8823529411764706	86.69031664695835	102	0.8823529411764706	1.1162790697674418	55	0	methylated (>=50%)	Q9NQZ6	Zinc finger C4H2 domain-containing protein (Hepatocellular carcinoma-associated antigen 127)	nervous system development [GO:0007399]; neuromuscular junction development [GO:0007528]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein monoubiquitination [GO:0006513]; regulation of transcription regulatory region DNA binding [GO:2000677]; spinal cord motor neuron differentiation [GO:0021522]	hit with GO BP
GN014589	Chromosome_6A	6399	5	101	33.78652914517893	0.5559671288120109	85.35373349025761	101	0.8712871287128713	79.12457912457913	8	0.75	85.87834963845172	93	0.8817204301075269	0.5497861942577886	41	0	methylated (>=50%)	P47813	Eukaryotic translation initiation factor 1A, X-chromosomal (eIF-1A X isoform) (eIF1A X isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)	ribosome assembly [GO:0042255]; translational initiation [GO:0006413]	hit with GO BP
GN014590	Chromosome_6A	854	3	28	43.79391100702576	0.7149007414494141	0.458295142071494	28	0	0.6426735218508998	22	0	0	6	0	0.8411214953271028	50	0	unmethylated (<10%)	Q9BRZ2	E3 ubiquitin-protein ligase TRIM56 (EC 2.3.2.27) (RING finger protein 109) (Tripartite motif-containing protein 56)	defense response to virus [GO:0051607]; innate immune response [GO:0045087]; positive regulation of innate immune response [GO:0045089]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein K63-linked ubiquitination [GO:0070534]; protein monoubiquitination [GO:0006513]; regulation of type I interferon production [GO:0032479]; response to type I interferon [GO:0034340]	hit with GO BP
GN014591	Chromosome_6A	6511	7	122	34.74120718783597	0.6211620269002189	0.8023648648648649	120	0	0.8381689232753062	31	0	0.7923644876643255	89	0	0.8208955223880597	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014592	Chromosome_6A	1428	1	50	40.68627450980392	0.8757727406535178	1.7205422314911365	50	0	1.7205422314911365	50	0	NA	NA	NA	0.8333333333333334	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014593	Chromosome_6A	1951	3	8	33.98257303946694	0.1434084310338491	86.7965367965368	8	1	90.85545722713864	6	1	75.60975609756098	2	1	69.91321118611378	33	0.9393939393939394	methylated (>=50%)	Q5RDZ2	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)	D-glucuronate catabolic process to D-xylulose 5-phosphate [GO:0019640]; fatty acid metabolic process [GO:0006631]	hit with GO BP
GN014594	Chromosome_6A	2197	3	41	36.91397360036413	0.5522875816993464	84.59240290226205	41	0.9512195121951219	86.63663663663664	13	1	83.78056052474658	28	0.9285714285714286	75.18072289156626	10	1	methylated (>=50%)	Q99KP3	Lambda-crystallin homolog (EC 1.1.1.45) (L-gulonate 3-dehydrogenase) (Gul3DH)	D-glucuronate catabolic process to D-xylulose 5-phosphate [GO:0019640]; fatty acid metabolic process [GO:0006631]	hit with GO BP
GN014595	Chromosome_6A	3156	5	40	38.87832699619772	0.3426970562366304	93.05977710233029	40	1	94.82142857142857	35	1	82.99319727891157	5	1	88.99548532731377	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014596	Chromosome_6A	3784	4	76	37.684989429175474	0.5676690913038758	91.5982163811312	75	1	90.3886925795053	31	1	92.1995783555868	44	1	31.04110641567422	44	0.13636363636363635	methylated (>=50%)	Q16611	Bcl-2 homologous antagonist/killer (Apoptosis regulator BAK) (Bcl-2-like protein 7) (Bcl2-L-7)	animal organ regeneration [GO:0031100]; apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cellular response to mechanical stimulus [GO:0071260]; cellular response to unfolded protein [GO:0034620]; cellular response to UV [GO:0034644]; endocrine pancreas development [GO:0031018]; endoplasmic reticulum calcium ion homeostasis [GO:0032469]; establishment or maintenance of transmembrane electrochemical gradient [GO:0010248]; extrinsic apoptotic signaling pathway in absence of ligand [GO:0097192]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901029]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; positive regulation of apoptotic process [GO:0043065]; positive regulation of IRE1-mediated unfolded protein response [GO:1903896]; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901030]; positive regulation of protein-containing complex assembly [GO:0031334]; positive regulation of proteolysis [GO:0045862]; positive regulation of release of cytochrome c from mitochondria [GO:0090200]; regulation of mitochondrial membrane permeability [GO:0046902]; regulation of mitochondrial membrane potential [GO:0051881]; release of cytochrome c from mitochondria [GO:0001836]; response to ethanol [GO:0045471]; response to hydrogen peroxide [GO:0042542]; response to UV-C [GO:0010225]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN014597	Chromosome_6A	4700	10	127	35.787234042553195	0.8441378452069828	0.6136680613668062	127	0	0.5291005291005291	77	0	0.7079646017699115	50	0	0.39279869067103107	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014598	Chromosome_6A	1989	1	21	41.27702362996481	0.2478754717876896	2.346041055718475	21	0	2.346041055718475	21	0	NA	NA	NA	0.5578800557880056	37	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014599	Chromosome_6A	1989	1	19	40.623428858722974	0.23190353460972019	4.120443740095087	19	0	4.120443740095087	19	0	NA	NA	NA	0.5660377358490566	36	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014600	Chromosome_6A	1993	2	16	40.94330155544405	0.19157129554534258	3.247863247863248	16	0	3.247863247863248	16	0	NA	NA	NA	0.5524861878453039	36	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014601	Chromosome_6A	1992	1	15	40.16064257028113	0.18680720970797307	3.8394415357766145	15	0	3.8394415357766145	15	0	NA	NA	NA	0.553877139979859	37	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014602	Chromosome_6A	13631	16	215	34.003374660699876	0.547650067852088	87.80615243942263	213	0.9342723004694836	90.4302372336148	40	0.9	87.29725514660012	173	0.9421965317919075	58.49990481629545	67	0.6417910447761194	methylated (>=50%)	Q9D554	Splicing factor 3A subunit 3 (SF3a60) (Spliceosome-associated protein 61) (SAP 61)	mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN014603	Chromosome_6A	14598	15	200	36.14878750513769	0.42623192061890347	57.28539480474798	199	0.6030150753768844	73.04534094966084	54	0.7592592592592593	52.28328611898017	145	0.5448275862068965	1.1009174311926606	34	0	methylated (>=50%)	Q99549	M-phase phosphoprotein 8 (Two hybrid-associated protein 3 with RanBPM) (Twa3)	constitutive heterochromatin formation [GO:0140719]; negative regulation of gene expression via chromosomal CpG island methylation [GO:0044027]; negative regulation of gene expression, epigenetic [GO:0045814]; negative regulation of type I interferon production [GO:0032480]; transposable element silencing by heterochromatin formation [GO:0141005]	hit with GO BP
GN014604	Chromosome_6A	3624	3	45	35.73399558498896	0.38905827285609995	77.32457656412029	45	0.9111111111111111	89.60802187784869	22	1	69.82182628062361	23	0.8260869565217391	89.6141019533111	29	1	methylated (>=50%)	Q922M3	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 (mBACURD3) (BTB/POZ domain-containing protein KCTD10)	angiogenesis [GO:0001525]; cilium assembly [GO:0060271]; establishment of endothelial barrier [GO:0061028]; heart development [GO:0007507]; negative regulation of Notch signaling pathway [GO:0045746]; negative regulation of Rho protein signal transduction [GO:0035024]; positive regulation of cilium assembly [GO:0045724]; positive regulation of ferroptosis [GO:0160020]; positive regulation of protein K63-linked ubiquitination [GO:1902523]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN014605	Chromosome_6A	17209	13	276	34.2088442094253	0.5491172382027897	84.85186631702283	274	0.9416058394160584	84.78260869565217	27	0.9259259259259259	84.85806333961462	247	0.9433198380566802	73.20862396956247	40	0.775	methylated (>=50%)	Q5ZMS3	Eukaryotic translation initiation factor 2 subunit 3 (EC 3.6.5.3) (Eukaryotic translation initiation factor 2 subunit gamma) (eIF2-gamma)	cytoplasmic translational initiation [GO:0002183]; formation of translation preinitiation complex [GO:0001731]	hit with GO BP
GN014606	Chromosome_6A	13038	6	131	36.60837551771744	0.30226221762098165	81.8914398662004	129	0.9534883720930233	87.8177966101695	24	1	80.89827800461566	105	0.9428571428571428	93.19880418535126	21	1	methylated (>=50%)	O54862	Membrane-bound transcription factor site-2 protease (EC 3.4.24.85) (Endopeptidase S2P) (Sterol regulatory element-binding proteins intramembrane protease) (SREBPs intramembrane protease)	bone maturation [GO:0070977]; membrane protein intracellular domain proteolysis [GO:0031293]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; positive regulation of cholesterol biosynthetic process [GO:0045542]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein maturation [GO:0051604]; regulation of response to endoplasmic reticulum stress [GO:1905897]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN014607	Chromosome_6A	1983	1	17	40.847201210287444	0.20552856036727005	58.22222222222222	17	0.7058823529411765	58.22222222222222	17	0.7058823529411765	NA	NA	NA	1.6110471806674338	34	0	methylated (>=50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014608	Chromosome_6A	26302	6	352	35.80336096114364	0.41921231605161874	61.71829026908468	345	0.6666666666666666	71.50991142977647	114	0.8070175438596491	58.390079564188945	231	0.5974025974025974	0.3755868544600939	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014609	Chromosome_6A	897	1	33	44.593088071348944	0.7499429961237364	1.1976047904191616	33	0	1.1976047904191616	33	0	NA	NA	NA	0.3249097472924188	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014610	Chromosome_6A	1666	4	30	35.95438175270108	0.5586854460093896	0.9894459102902374	30	0	0.8951406649616368	13	0	1.0899182561307903	17	0	0.4743551734361103	50	0	unmethylated (<10%)	Q16827	Receptor-type tyrosine-protein phosphatase O (R-PTP-O) (EC 3.1.3.48) (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTP-U2) (PTPase U2)	axon guidance [GO:0007411]; cell morphogenesis [GO:0000902]; glomerulus development [GO:0032835]; lamellipodium assembly [GO:0030032]; monocyte chemotaxis [GO:0002548]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of glomerular filtration [GO:0003105]; negative regulation of neuron projection development [GO:0010977]; negative regulation of retinal ganglion cell axon guidance [GO:0090260]; podocyte differentiation [GO:0072112]; regulation of glomerular filtration [GO:0003093]; regulation of synapse organization [GO:0050807]; slit diaphragm assembly [GO:0036060]	hit with GO BP
GN014611	Chromosome_6A	924	2	31	48.701298701298704	0.647687959299039	86.37440758293839	29	1	80.71278825995807	21	1	93.73297002724796	8	1	88.962806168733	44	0.9772727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014612	Chromosome_6A	12269	15	174	36.612600863966094	0.42475079685317607	80.99030803185875	174	0.9482758620689655	88.23313782991202	55	1	78.42194202521773	119	0.9243697478991597	89.60464473320431	51	1	methylated (>=50%)	Q9IBG7	Kielin/chordin-like protein (Cysteine-rich motor neuron 2 protein) (CRIM-2) (Kielin)	heart valve development [GO:0003170]; positive regulation of BMP signaling pathway [GO:0030513]	hit with GO BP
GN014613	Chromosome_6A	51365	34	647	34.527401927382456	0.4258286084042874	78.62619652275835	555	0.9405405405405406	88.03134647352172	84	0.9761904761904762	77.5482431071555	471	0.9341825902335457	64.74550898203593	36	0.7222222222222222	methylated (>=50%)	Q28BX9	C2 domain-containing protein 5 (138 kDa C2 domain-containing phosphoprotein)	insulin receptor signaling pathway [GO:0008286]; intracellular protein transmembrane transport [GO:0065002]; positive regulation of D-glucose transmembrane transport [GO:0010828]; positive regulation of protein targeting to membrane [GO:0090314]; positive regulation of vesicle fusion [GO:0031340]; protein localization to plasma membrane [GO:0072659]	hit with GO BP
GN014614	Chromosome_6A	9531	7	128	35.316336166194525	0.43563315583792306	83.72177713037145	128	0.8984375	69.19739696312364	24	0.7083333333333334	85.55221432476763	104	0.9423076923076923	1.098901098901099	35	0	methylated (>=50%)	Q5F4B1	Phosphoglycolate phosphatase (EC 3.1.3.18) (Aspartate-based ubiquitous Mg(2+)-dependent phosphatase) (AUM) (EC 3.1.3.48) (Glycerol-3-phosphate phosphatase) (G3PP) (EC 3.1.3.21)	glycerol biosynthetic process [GO:0006114]; glycerophospholipid metabolic process [GO:0006650]; negative regulation of gluconeogenesis [GO:0045721]; toxic metabolite repair [GO:0110052]	hit with GO BP
GN014615	Chromosome_6A	3234	2	115	40.44526901669759	0.8798959011060508	0.5317734645041212	115	0	0.4107713372889092	65	0	0.7006369426751592	50	0	1.4502762430939227	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014616	Chromosome_6A	1074	1	42	43.01675977653631	0.8459071729957806	0.6480881399870383	42	0	0.6480881399870383	42	0	NA	NA	NA	0.5297233666862861	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014617	Chromosome_6A	807	1	28	43.24659231722429	0.7430939226519337	0.6066734074823054	28	0	0.6066734074823054	28	0	NA	NA	NA	0.5309734513274337	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014618	Chromosome_6A	1677	2	53	39.71377459749553	0.8029505027418175	0.8576998050682261	52	0	0.8576998050682261	52	0	NA	NA	NA	0.3304692663582287	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014619	Chromosome_6A	1709	2	43	35.2837916910474	0.8084200567644276	0.40404040404040403	43	0	0.21231422505307856	8	0	0.4491017964071856	35	0	0.6441638752898737	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014620	Chromosome_6A	1113	1	30	39.712488769092545	0.6892921285687744	0.6369426751592356	30	0	0.6369426751592356	30	0	NA	NA	NA	0.800640512409928	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014621	Chromosome_6A	1095	1	26	39.54337899543379	0.6091142490372272	0.08748906386701662	26	0	0.08748906386701662	26	0	NA	NA	NA	3.551511593777517	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014622	Chromosome_6A	33445	19	300	34.68380923904918	0.29953324936988607	79.9421776129173	293	0.89419795221843	86.16383616383617	47	0.8936170212765957	79.17942437232088	246	0.8943089430894309	0.9098428453267163	33	0	methylated (>=50%)	Q96D71	RalBP1-associated Eps domain-containing protein 1 (RalBP1-interacting protein 1)	NA	hit, no GO BP
GN014623	Chromosome_6A	1307	4	25	45.75363427697016	0.3655248791838196	18.93491124260355	10	0	19.594594594594593	7	0	18.42105263157895	3	0	0.8403361344537815	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014624	Chromosome_6A	18187	15	281	34.83257271677572	0.5111049927312847	89.14905202712737	278	0.9388489208633094	88.62491000719942	21	0.9523809523809523	89.18775249840527	257	0.9377431906614786	0.4943502824858757	57	0	methylated (>=50%)	Q3MHL3	Histone-binding protein RBBP4 (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Nucleosome-remodeling factor subunit RBAP48) (Retinoblastoma-binding protein 4) (RBBP-4)	DNA replication-dependent chromatin assembly [GO:0006335]	hit with GO BP
GN014625	Chromosome_6A	6719	8	88	34.70754576573895	0.43590628271479337	68.19401444788441	88	0.75	67.98365122615805	51	0.6666666666666666	68.3692773363602	37	0.8648648648648649	0.7003501750875438	55	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014626	Chromosome_6A	8469	7	143	35.694887235801154	0.530616778304714	83.42555331991952	143	0.9090909090909091	60.87824351297405	10	0.5	84.94161857468796	133	0.9398496240601504	17.942583732057415	28	0.2857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014627	Chromosome_6A	7528	8	152	38.16418703506908	0.5557403291733366	88.62052391252102	152	1	79.35483870967742	11	1	89.16889397989054	141	1	82.48175182481752	6	1	methylated (>=50%)	Q6NU46	Acetyl-CoA acetyltransferase A, mitochondrial (EC 2.3.1.9) (Acetoacetyl-CoA thiolase A)	fatty acid beta-oxidation [GO:0006635]	hit with GO BP
GN014628	Chromosome_6A	1977	1	8	39.95953464845726	0.10146201268916674	61.224489795918366	8	0.75	61.224489795918366	8	0.75	NA	NA	NA	78.27242524916943	44	0.9545454545454546	methylated (>=50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014629	Chromosome_6A	1855	3	24	35.525606469002696	0.48634476731483506	4.748062015503876	24	0	6.810035842293907	8	0	3.9840637450199203	16	0	3	5	0	unmethylated (<10%)	Q8QZT1	Acetyl-CoA acetyltransferase, mitochondrial (EC 2.3.1.9) (Acetoacetyl-CoA thiolase)	acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA catabolic process [GO:0046356]; adipose tissue development [GO:0060612]; coenzyme A biosynthetic process [GO:0015937]; coenzyme A metabolic process [GO:0015936]; fatty acid beta-oxidation [GO:0006635]; ketone body catabolic process [GO:0046952]; L-isoleucine catabolic process [GO:0006550]; liver development [GO:0001889]; metanephric proximal convoluted tubule development [GO:0072229]; propionyl-CoA biosynthetic process [GO:1902860]; response to hormone [GO:0009725]; response to starvation [GO:0042594]	hit with GO BP
GN014630	Chromosome_6A	153	1	2	45.751633986928105	0.29737609329446063	1.1904761904761905	2	0	1.1904761904761905	2	0	NA	NA	NA	1.1503697617091209	21	0	NA	Q8QZT1	Acetyl-CoA acetyltransferase, mitochondrial (EC 2.3.1.9) (Acetoacetyl-CoA thiolase)	acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA catabolic process [GO:0046356]; adipose tissue development [GO:0060612]; coenzyme A biosynthetic process [GO:0015937]; coenzyme A metabolic process [GO:0015936]; fatty acid beta-oxidation [GO:0006635]; ketone body catabolic process [GO:0046952]; L-isoleucine catabolic process [GO:0006550]; liver development [GO:0001889]; metanephric proximal convoluted tubule development [GO:0072229]; propionyl-CoA biosynthetic process [GO:1902860]; response to hormone [GO:0009725]; response to starvation [GO:0042594]	hit with GO BP
GN014631	Chromosome_6A	1989	1	10	40.42232277526395	0.1230793982784973	4.069767441860465	10	0	4.069767441860465	10	0	NA	NA	NA	1.0145324924595558	47	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014632	Chromosome_6A	1977	1	12	40.51593323216996	0.14804922493197872	2.540415704387991	12	0	2.540415704387991	12	0	NA	NA	NA	1.7191977077363896	50	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014633	Chromosome_6A	663	1	16	40.42232277526395	0.5919642857142857	5.936073059360731	16	0	5.936073059360731	16	0	NA	NA	NA	0.9771986970684039	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014634	Chromosome_6A	2147	2	9	39.26408942710759	0.10877005347593582	1.9693654266958425	9	0	1.9693654266958425	9	0	NA	NA	NA	0.3536693191865606	53	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014635	Chromosome_6A	498	1	10	41.967871485943775	0.4707884288145207	0.6802721088435374	10	0	0.6802721088435374	10	0	NA	NA	NA	3.453136011275546	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014636	Chromosome_6A	1995	1	23	40.25062656641604	0.28531544191715064	1.4423076923076923	23	0	1.4423076923076923	23	0	NA	NA	NA	0.7985803016858918	34	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN014637	Chromosome_6A	27915	11	326	35.89468027941967	0.36312708053215653	57.301354217653774	317	0.6624605678233438	76.59271899886234	100	0.93	52.7402326676081	217	0.5391705069124424	39.68705547652916	23	0.21739130434782608	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014638	Chromosome_6A	7419	9	157	34.586871546030466	0.7088620613897624	1.007073492387004	157	0	1.0408326661329064	98	0	0.9566517189835575	59	0	0.8802816901408451	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014639	Chromosome_6A	354	1	17	46.045197740113	0.9063253012048192	0.6557377049180327	17	0	0.6557377049180327	17	0	NA	NA	NA	0.954252034802133	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014640	Chromosome_6A	1992	3	63	37.14859437751004	0.9170265471205911	0.3872966692486445	34	0	0.3225806451612903	17	0	0.44709388971684055	17	0	3.1446540880503147	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014641	Chromosome_6A	9108	10	283	37.26394378568292	0.8953456382553021	0.724062685975005	267	0	0.63030967388325565	90	0	0.77724234416291	177	0	1.2937595129375952	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014642	Chromosome_6A	243	1	14	48.148148148148145	0.9947368421052631	0.2183406113537118	14	0	0.2183406113537118	14	0	NA	NA	NA	0.5001667222407469	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014643	Chromosome_6A	1993	3	62	37.23030607124937	0.8981588492262514	0.5509641873278237	27	0	0.6640106241699867	23	0	0.2976190476190476	4	0	0.3923766816143498	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014644	Chromosome_6A	2424	3	74	39.68646864686469	0.7754720896451546	10.10061919504644	74	0.14864864864864866	26.90863579474343	29	0.3793103448275862	2.57703081232493	45	0	0.5422374429223744	56	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014645	Chromosome_6A	4841	7	50	33.030365626936586	0.3833738802093232	76.1956228046474	50	0.82	72.65415549597856	12	0.8333333333333334	77.08967851099831	38	0.8157894736842105	3.1237155774763665	53	0	methylated (>=50%)	Q9H446	RWD domain-containing protein 1 (DRG family-regulatory protein 2)	androgen receptor signaling pathway [GO:0030521]; cytoplasmic translation [GO:0002181]	hit with GO BP
GN014646	Chromosome_6A	12857	5	206	34.55705063389593	0.5368658961271674	82.72958160673707	203	0.9014778325123153	80.40201005025126	15	0.8666666666666667	82.89539629125797	188	0.9042553191489362	15.432372505543237	30	0.2	methylated (>=50%)	A4FUI1	Protein MIX23 (Coiled-coil domain-containing protein 58)	NA	hit, no GO BP
GN014647	Chromosome_6A	18137	14	341	36.17467056293764	0.5770515190165136	79.27054108216433	341	0.9354838709677419	77.80458383594693	32	0.84375	79.37489266701013	309	0.9449838187702265	54.16352675207234	76	0.5789473684210527	methylated (>=50%)	O15131	Importin subunit alpha-6 (Karyopherin subunit alpha-5)	NLS-bearing protein import into nucleus [GO:0006607]	hit with GO BP
GN014648	Chromosome_6A	372	1	20	47.8494623655914	0.9631067961165048	0.7575757575757576	20	0	0.7575757575757576	20	0	NA	NA	NA	0.6032482598607889	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014649	Chromosome_6A	1044	1	32	40.13409961685824	0.7700534759358288	0.43923865300146414	32	0	0.43923865300146414	32	0	NA	NA	NA	0.5976095617529881	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014650	Chromosome_6A	10219	8	121	34.81749681964967	0.3909165031391901	53.58440300314846	115	0.6173913043478261	42.5142135186355	20	0.6	56.20973782771536	95	0.6210526315789474	22.005988023952096	33	0.21212121212121213	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014651	Chromosome_6A	792	1	9	42.17171717171717	0.25591498222812625	73.43096234309624	9	0.6666666666666666	73.43096234309624	9	0.6666666666666666	NA	NA	NA	63.04	9	0.7777777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014652	Chromosome_6A	849	2	5	39.10482921083628	0.15515350877192982	59.593023255813954	5	0.8	59.593023255813954	5	0.8	NA	NA	NA	79.4074074074074	8	0.875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014653	Chromosome_6A	2013	3	61	38.69846000993542	0.8094569473559309	3.312763884378045	55	0	2.4923181973369752	31	0	4.056983586249613	24	0	1.2184508268059182	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003869	Chromosome_6A	1425	1	7	43.64912280701754	0.11914004180352344	88.31168831168831	5	1	88.31168831168831	5	1	NA	NA	NA	90.03091190108192	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014654	Chromosome_6A	1764	1	19	37.981859410430836	0.3057359702254981	46.72281215671915	19	0.5789473684210527	46.72281215671915	19	0.5789473684210527	NA	NA	NA	59.7463597933302	14	0.7142857142857143	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014655	Chromosome_6A	2881	6	70	35.508503991669556	0.7709038921720782	1.9740129935032484	69	0	1.676933607118412	54	0	2.7777777777777777	15	0	1.229754049190162	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014656	Chromosome_6A	624	1	26	45.51282051282051	0.804642166344294	0.5333333333333333	26	0	0.5333333333333333	26	0	NA	NA	NA	0.5985634477254589	57	0	unmethylated (<10%)	Q06234	Achaete-scute homolog 1 (XASH1)	nervous system development [GO:0007399]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron fate commitment [GO:0048663]; neuron fate specification [GO:0048665]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of neurogenesis [GO:0050767]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory organ development [GO:0007423]; ventral spinal cord interneuron fate commitment [GO:0060579]	hit with GO BP
GN014657	Chromosome_6A	2847	2	76	35.05444327362135	0.8719052224371373	0.5497251374312844	74	0	0.373134328358209	15	0	0.5770340450086555	59	0	2.276707530647986	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014658	Chromosome_6A	600	1	30	52.333333333333336	0.7422986514907831	0.32051282051282054	23	0	0.32051282051282054	23	0	NA	NA	NA	0.5495943470295734	65	0	unmethylated (<10%)	Q06234	Achaete-scute homolog 1 (XASH1)	nervous system development [GO:0007399]; neuron development [GO:0048666]; neuron differentiation [GO:0030182]; neuron fate commitment [GO:0048663]; neuron fate specification [GO:0048665]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of neurogenesis [GO:0050767]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory organ development [GO:0007423]; ventral spinal cord interneuron fate commitment [GO:0060579]	hit with GO BP
GN014659	Chromosome_6A	1539	2	66	39.89603638726446	1.0788643533123028	0.39551746868820037	66	0	0.45126353790613716	37	0	0.363447559709242	29	0	0.3648424543946932	50	0	unmethylated (<10%)	Q90259	Achaete-scute homolog 1a (Zash-1a) (Pituitary-absent protein)	adenohypophysis development [GO:0021984]; axon regeneration [GO:0031103]; cell dedifferentiation [GO:0043697]; embryonic digestive tract development [GO:0048566]; epithelial cell maturation [GO:0002070]; hindbrain morphogenesis [GO:0021575]; intestinal epithelial cell differentiation [GO:0060575]; negative regulation of gene expression [GO:0010629]; nervous system development [GO:0007399]; neuron differentiation [GO:0030182]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regeneration [GO:0031099]; regulation of neurogenesis [GO:0050767]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory epithelium regeneration [GO:0070654]; sensory organ development [GO:0007423]; sympathetic ganglion development [GO:0061549]; taste bud formation [GO:0061195]	hit with GO BP
GN014660	Chromosome_6A	2211	1	53	44.73089099954772	0.47996313741552327	97.06106870229007	53	1	97.06106870229007	53	1	NA	NA	NA	85.6470588235294	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014661	Chromosome_6A	3552	5	50	33.924549549549546	0.48930472443548123	85.56769281694802	50	0.9	94.27207637231504	11	1	84.16602613374327	39	0.8717948717948718	1.1960478419136766	40	0	methylated (>=50%)	Q32PJ3	Origin recognition complex subunit 3	DNA replication initiation [GO:0006270]; regulation of DNA replication [GO:0006275]	hit with GO BP
GN014662	Chromosome_6A	2350	3	34	34.680851063829785	0.481859410430839	38.01775147928994	34	0.4117647058823529	40.63079777365492	16	0.375	35.05263157894737	18	0.4444444444444444	2.5188916876574305	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014663	Chromosome_6A	3913	5	110	39.25376948632763	0.7298046077573637	1.7430946634486457	110	0	1.7018379850238257	46	0	1.7699115044247788	64	0	0.9168510907366424	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014664	Chromosome_6A	9799	11	135	35.56485355648535	0.43592960353050036	81.50130710817876	134	0.9402985074626866	83.79290939786156	37	0.9459459459459459	80.85038363171356	97	0.9381443298969072	27.069044352994972	31	0.2903225806451613	methylated (>=50%)	Q2T9T0	Stabilizer of axonemal microtubules 4 (Protein phosphatase 1 regulatory subunit 32)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN014665	Chromosome_6A	57053	12	693	34.91490368604631	0.40086893789301403	65.42655846722627	693	0.7344877344877345	79.37619350732018	36	0.8611111111111112	64.8976735206101	657	0.7275494672754946	64.11657559198542	26	0.8076923076923077	methylated (>=50%)	F1NTD6	Activating signal cointegrator 1 complex subunit 3 (EC 5.6.2.4)	DNA alkylation repair [GO:0006307]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome disassembly [GO:0032790]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN014666	Chromosome_6A	1377	1	23	39.94190268700073	0.42079878826530615	86.4461045891142	23	1	86.4461045891142	23	1	NA	NA	NA	76.48484848484848	15	1	methylated (>=50%)	O16374	Beta-1,4-galactosyltransferase galt-1 (EC 2.4.1.-)	carbohydrate derivative biosynthetic process [GO:1901137]; N-glycan processing [GO:0006491]	hit with GO BP
GN002000	Chromosome_6A	282	1	6	40.780141843971634	0.5518590998043053	2.1333333333333333	6	0	2.1333333333333333	6	0	NA	NA	NA	2.6030368763557483	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014667	Chromosome_6A	3835	4	121	35.4367666232073	1.005928896596575	1.1051250172675784	120	0	0.7920792079207921	22	0	1.1558837694654038	98	0	0.581135449262405	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014668	Chromosome_6A	1674	1	62	40.74074074074074	0.9015244299674267	0.6139677666922486	62	0	0.6139677666922486	62	0	NA	NA	NA	0.43741588156123823	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014669	Chromosome_6A	7925	9	76	37.31230283911672	0.2756065127882703	79.82430453879941	75	0.8133333333333334	73.03370786516854	21	0.6666666666666666	81.90512624330528	54	0.8703703703703703	33.35793357933579	25	0.44	methylated (>=50%)	H0VCJ6	N-acylethanolamine-hydrolyzing acid amidase (EC 3.5.1.60) (Acylsphingosine deacylase NAAA) (EC 3.5.1.23) [Cleaved into: N-acylethanolamine-hydrolyzing acid amidase subunit alpha; N-acylethanolamine-hydrolyzing acid amidase subunit beta]	fatty acid metabolic process [GO:0006631]; N-acylethanolamine metabolic process [GO:0070291]; N-acylphosphatidylethanolamine metabolic process [GO:0070292]; sphingosine metabolic process [GO:0006670]	hit with GO BP
GN014670	Chromosome_6A	13602	17	126	35.66387295985884	0.2967638175918913	81.23205429391804	122	0.9098360655737705	75.58541266794626	47	0.8297872340425532	84.14079493771011	75	0.96	51.29469790382244	31	0.5806451612903226	methylated (>=50%)	Q80Y44	Probable ATP-dependent RNA helicase DDX10 (EC 3.6.4.13) (DEAD box protein 10)	anterior head development [GO:0097065]; rRNA processing [GO:0006364]	hit with GO BP
GN014671	Chromosome_6A	10615	7	286	37.57889778615167	0.7654292786803077	15.590484282073067	286	0.11188811188811189	22.028985507246375	51	0.13725490196078433	14.216494845360824	235	0.10638297872340426	1.4482515012363122	44	0	sparse (10-50%)	P43143	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN014672	Chromosome_6A	789	1	43	49.049429657794676	0.9062666951597393	6.8119891008174385	43	0	6.8119891008174385	43	0	NA	NA	NA	0.344149459193707	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014673	Chromosome_6A	1993	2	20	35.323632714500754	0.3306786129085781	2.8048780487804876	20	0	3.185595567867036	18	0	0	2	0	5.070422535211268	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014674	Chromosome_6A	402	1	7	40.298507462686565	0.4463124504361618	14.671814671814673	7	0	14.671814671814673	7	0	NA	NA	NA	2.3688663282571913	13	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014675	Chromosome_6A	6313	5	99	36.6228417551085	0.47060325061838554	2.241425870915474	99	0	2.737110120942075	39	0	1.876172607879925	60	0	1.007838745800672	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014676	Chromosome_6A	15988	7	241	34.757317988491366	0.504696440084008	82.95049959802458	239	0.8870292887029289	65.12791991101224	44	0.5454545454545454	85.00256147540983	195	0.9641025641025641	16.49484536082474	25	0	methylated (>=50%)	Q8VIJ6	Splicing factor, proline- and glutamine-rich (DNA-binding p52/p100 complex, 100 kDa subunit) (Polypyrimidine tract-binding protein-associated-splicing factor) (PSF) (PTB-associated-splicing factor)	activation of innate immune response [GO:0002218]; alternative mRNA splicing, via spliceosome [GO:0000380]; chromatin remodeling [GO:0006338]; chromosome organization [GO:0051276]; dendritic transport of messenger ribonucleoprotein complex [GO:0098963]; DNA damage response [GO:0006974]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of circadian rhythm [GO:0042754]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [GO:1902177]; positive regulation of sister chromatid cohesion [GO:0045876]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell cycle [GO:0051726]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN014677	Chromosome_6A	2747	3	41	34.510374954495816	0.5048817443382524	0.7926678226405747	41	0	1.376720901126408	8	0	0.6485484867201976	33	0	0.6998026197739099	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014678	Chromosome_6A	1798	5	20	33.14794215795328	0.4073633531577457	29.9229152067274	20	0.4	38.75685557586837	17	0.47058823529411764	0.9009009009009009	3	0	68.22674418604652	59	0.6271186440677966	sparse (10-50%)	A5PK71	Parkin coregulated gene protein	flagellated sperm motility [GO:0030317]	hit with GO BP
GN014679	Chromosome_6A	2374	3	92	41.954507160909856	0.8832595288646244	0.9438009438009438	83	0	1.0119047619047619	72	0	0.7680491551459293	11	0	0.4508312200619893	64	0	unmethylated (<10%)	A1ZAY1	SH3 domain-containing protein Dlish (Dachs ligand with SH3 domains)	establishment of epithelial cell planar polarity [GO:0090163]; establishment of planar polarity [GO:0001736]; negative regulation of hippo signaling [GO:0035331]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; protein localization involved in establishment of planar polarity [GO:0090251]	hit with GO BP
GN014680	Chromosome_6A	1221	1	56	42.34234234234234	1.0274380165289256	0.6539235412474849	56	0	0.6539235412474849	56	0	NA	NA	NA	31.484570475396165	45	0.2	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014681	Chromosome_6A	7294	12	58	34.32958596106389	0.2701377980409435	74.25343018563358	58	0.896551724137931	75.96153846153847	29	0.9655172413793104	73.01808066759388	29	0.8275862068965517	0.27418723070896983	31	0	methylated (>=50%)	Q9Z2I6	Synaptic vesicle glycoprotein 2C (Synaptic vesicle protein 2C)	chemical synaptic transmission [GO:0007268]; negative regulation of excitatory postsynaptic potential [GO:0090394]; regulation of synaptic vesicle exocytosis [GO:2000300]	hit with GO BP
GN014682	Chromosome_6A	3942	7	37	34.145104008117706	0.3220495790396407	22.25886232481451	25	0	23.014586709886547	19	0	21.476510067114095	6	0	3.465818759936407	68	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014683	Chromosome_6A	11933	11	272	35.39763680549736	0.7284869968665715	0.8747250498746739	270	0	0.872093023255814	47	0	0.8752871065863803	223	0	0.8333333333333334	45	0	unmethylated (<10%)	P18173	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	glucose metabolic process [GO:0006006]; pupal chitin-based cuticle development [GO:0008364]; sperm storage [GO:0046693]	hit with GO BP
GN014684	Chromosome_6A	649	2	18	42.526964560862865	0.6160417655434267	0.8833922261484098	18	0	1.0416666666666667	16	0	0	2	0	0.5059797608095676	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014685	Chromosome_6A	634	3	14	35.17350157728707	0.7171945701357466	0.6313131313131313	14	0	0.4792332268370607	11	0	1.2048192771084338	3	0	0.8105369807497467	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014686	Chromosome_6A	243	1	8	43.62139917695473	0.7126099706744868	0.45248868778280543	8	0	0.45248868778280543	8	0	NA	NA	NA	3.2065622669649514	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014687	Chromosome_6A	2031	2	79	42.44214672575086	0.8937667112299466	0.5924950625411455	79	0	0.6048387096774194	78	0	0	1	0	7.386363636363637	42	0.11904761904761904	unmethylated (<10%)	Q9PUK5	Paired box protein Pax-8 (XPax-8)	cell proliferation involved in pronephros development [GO:0039015]; cellular response to retinoic acid [GO:0071300]; metanephric nephron tubule development [GO:0072234]; metanephros development [GO:0001656]; nervous system development [GO:0007399]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of thyroid hormone generation [GO:2000611]; pronephric field specification [GO:0039003]; pronephric nephron tubule development [GO:0039020]; pronephros development [GO:0048793]; proximal tubule development [GO:0072014]; regulation of apoptotic process [GO:0042981]; regulation of pronephros size [GO:0035565]; regulation of transcription by RNA polymerase II [GO:0006357]; sensory organ development [GO:0007423]; urogenital system development [GO:0001655]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN014688	Chromosome_6A	20750	18	175	34.433734939759034	0.28464304801537266	65.5561303673047	172	0.7848837209302325	57.98076923076923	40	0.75	67.63348714568227	132	0.7954545454545454	0.684931506849315	65	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014689	Chromosome_6A	1541	3	15	30.82414016872161	0.40979683012445484	71.5547703180212	15	1	68.52459016393442	5	1	72.67230955259976	10	1	63.87665198237885	33	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014690	Chromosome_6A	11200	7	142	36.544642857142854	0.3803854655632044	78.16415599042658	140	0.9428571428571428	87.22280887011615	20	1	76.77063027940221	120	0.9333333333333333	34.95032144944477	42	0.6428571428571429	methylated (>=50%)	Q53FA7	Quinone oxidoreductase PIG3 (EC 1.6.5.5) (NADPH:quinone reductase PIG3) (Tumor protein p53-inducible protein 3) (Protein PIG3) (p53-induced gene 3 protein)	apoptotic process [GO:0006915]; reactive oxygen species biosynthetic process [GO:1903409]	hit with GO BP
GN014691	Chromosome_6A	12048	12	404	40.45484727755644	0.821092776854842	0.7555963561895347	403	0	0.6326611308817714	211	0	0.8239042074041525	192	0	0.7502679528403001	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014692	Chromosome_6A	10866	4	107	38.468617706607766	0.2661720791083688	84.20941524171417	97	0.9175257731958762	91.54929577464789	22	1	82.5997425997426	75	0.8933333333333333	82.1590174531351	19	0.9473684210526315	methylated (>=50%)	Q6GLJ1	BTB/POZ domain-containing protein 17	NA	hit, no GO BP
GN014693	Chromosome_6A	1224	1	40	41.42156862745098	0.7690616066099086	0.6035003017501509	40	0	0.6035003017501509	40	0	NA	NA	NA	0.5263157894736842	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014694	Chromosome_6A	38163	13	1080	37.069936849828366	0.8265513314229781	0.904891304347826	841	0	0.6273167949814656	94	0	0.9341302976601688	747	0	13.696498054474707	22	0.18181818181818182	unmethylated (<10%)	A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 (Polydom)	cell migration [GO:0016477]; epidermal cell differentiation [GO:0009913]; epidermis development [GO:0008544]; epithelial cell-cell adhesion [GO:0090136]; lymph vessel development [GO:0001945]; lymph vessel morphogenesis [GO:0036303]	hit with GO BP
GN014695	Chromosome_6A	3266	3	56	36.49724433557869	0.5210845862144613	91.08702198133092	55	0.9818181818181818	89.171974522293	18	0.9444444444444444	91.84531315678856	37	1	44.629938786867	32	0.5	methylated (>=50%)	Q63184	Interferon-induced, double-stranded RNA-activated protein kinase (EC 2.7.11.1) (Eukaryotic translation initiation factor 2-alpha kinase 2) (eIF-2A protein kinase 2) (Interferon-inducible RNA-dependent protein kinase) (Protein kinase RNA-activated) (PKR) (Protein kinase R) (Tyrosine-protein kinase EIF2AK2) (EC 2.7.10.2)	antiviral innate immune response [GO:0140374]; cellular response to amino acid starvation [GO:0034198]; endoplasmic reticulum unfolded protein response [GO:0030968]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cytoplasmic translation [GO:2000766]; negative regulation of osteoblast proliferation [GO:0033689]; negative regulation of translation [GO:0017148]; negative regulation of viral genome replication [GO:0045071]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of chemokine production [GO:0032722]; positive regulation of cytokine production [GO:0001819]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of stress-activated MAPK cascade [GO:0032874]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of hematopoietic progenitor cell differentiation [GO:1901532]; regulation of hematopoietic stem cell differentiation [GO:1902036]; regulation of hematopoietic stem cell proliferation [GO:1902033]; regulation of NLRP3 inflammasome complex assembly [GO:1900225]; regulation of translational initiation [GO:0006446]; response to exogenous dsRNA [GO:0043330]; response to interferon-alpha [GO:0035455]; response to lipopolysaccharide [GO:0032496]; response to mechanical stimulus [GO:0009612]; response to toxic substance [GO:0009636]; response to virus [GO:0009615]; response to vitamin E [GO:0033197]; translation [GO:0006412]	hit with GO BP
GN014696	Chromosome_6A	186	1	10	47.8494623655914	0.9403437815975733	0.9615384615384616	10	0	0.9615384615384616	10	0	NA	NA	NA	0.6635071090047393	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002540	Chromosome_6A	2802	6	26	32.83369022127052	0.3450101582220033	0.4444444444444444	25	0	0.535475234270415	18	0	0.26455026455026454	7	0	0.9009009009009009	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014697	Chromosome_6A	432	1	13	46.52777777777778	0.5563701208638795	0.45998160073597055	13	0	0.45998160073597055	13	0	NA	NA	NA	0.4875406283856988	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014698	Chromosome_6A	351	1	10	43.3048433048433	0.609375	0	10	0	0	10	0	NA	NA	NA	0.3655564581640942	85	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018713	Chromosome_6A	483	1	19	42.2360248447205	0.890625	0.4284490145672665	19	0	0.4284490145672665	19	0	NA	NA	NA	0.8254716981132075	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014699	Chromosome_6A	1395	4	36	35.69892473118279	0.8108239017065728	0.4355623879067384	36	0	0.29027576197387517	15	0	0.5148514851485149	21	0	0.749741468459152	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014700	Chromosome_6A	992	2	45	43.95161290322581	0.9421696918531026	0	4	0	0	3	0	0	1	0	3.039647577092511	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014701	Chromosome_6A	411	1	22	50.12165450121655	0.8526166902404526	2.18978102189781	7	0	2.18978102189781	7	0	NA	NA	NA	5.49738219895288	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014702	Chromosome_6A	495	1	10	41.41414141414141	0.4720579820713332	0	5	0	0	5	0	NA	NA	NA	3.7122969837587005	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014703	Chromosome_6A	1131	1	32	41.82139699381079	0.6506309998921368	0	7	0	0	7	0	NA	NA	NA	3.622047244094488	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014704	Chromosome_6A	1401	1	35	45.46752319771592	0.49256654947262685	0	3	0	0	3	0	NA	NA	NA	0.27932960893854747	22	0	NA	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN014705	Chromosome_6A	219	1	12	47.48858447488585	0.9898305084745763	8.88030888030888	12	0	8.88030888030888	12	0	NA	NA	NA	3.3380681818181817	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014706	Chromosome_6A	16346	12	135	34.62009054202863	0.27669408057658235	87.24422274254302	131	0.9770992366412213	84.87486398258977	19	1	87.48876909254268	112	0.9732142857142857	48.272552783109404	27	0.2962962962962963	methylated (>=50%)	Q6TGS6	Tyrosine--tRNA ligase, cytoplasmic (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)	DNA damage response [GO:0006974]; tyrosyl-tRNA aminoacylation [GO:0006437]	hit with GO BP
GN014707	Chromosome_6A	46278	56	512	35.064177362893815	0.3620421860107074	85.20706260032102	510	0.9647058823529412	86.63967611336032	132	0.9848484848484849	84.85285285285285	378	0.9576719576719577	84.24543946932006	10	1	methylated (>=50%)	P11029	Acetyl-CoA carboxylase (ACC) (EC 6.4.1.2) [Includes: Biotin carboxylase (EC 6.3.4.14)]	epigenetic regulation of gene expression [GO:0040029]; fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; response to carbohydrate [GO:0009743]; response to fatty acid [GO:0070542]; response to thyroid hormone [GO:0097066]	hit with GO BP
GN014708	Chromosome_6A	18475	2	282	39.1447902571042	0.4003510213083305	68.29677239066648	257	0.7626459143968871	51.86140803538518	47	0.46808510638297873	72.14033272993707	210	0.8285714285714286	69.2432872253865	25	0.68	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014709	Chromosome_6A	19207	14	261	34.19586609048784	0.46736751838414214	71.40108060099179	245	0.763265306122449	68.796992481203	25	0.6	71.62368442194906	220	0.7818181818181819	0.6161137440758294	38	0	methylated (>=50%)	Q9P2C4	Transmembrane protein 181	NA	hit, no GO BP
GN014710	Chromosome_6A	12223	11	167	36.16133518776078	0.4181764619237001	75.55414244186046	167	0.8982035928143712	82.39087301587301	49	0.9591836734693877	74.02135231316726	118	0.8728813559322034	0.5115089514066496	55	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014711	Chromosome_6A	1611	2	24	39.41651148355059	0.38359426156318827	82.48756218905473	21	1	90.2439024390244	15	1	77.14285714285714	6	1	93.52428393524283	26	1	methylated (>=50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN014712	Chromosome_6A	3339	1	40	41.509433962264154	0.278134110787172	90.10448678549477	40	1	90.10448678549477	40	1	NA	NA	NA	50.949367088607595	6	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014713	Chromosome_6A	523	2	18	44.168260038240916	0.7127498485766203	94.48529411764706	17	1	96.4332892998679	16	1	69.49152542372882	1	1	90.62893081761007	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014714	Chromosome_6A	786	1	33	44.529262086513995	0.8509563334536269	0.43541364296081275	33	0	0.43541364296081275	33	0	NA	NA	NA	0.6440071556350626	59	0	unmethylated (<10%)	P32629	Mannan polymerase II complex ANP1 subunit (M-Pol II subunit ANP1) (Aminonitrophenyl propanediol resistance protein)	cell wall mannoprotein biosynthetic process [GO:0000032]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN014715	Chromosome_6A	3366	5	108	38.47296494355318	0.8679483138985188	0.612205854218481	102	0	0.7017543859649122	42	0	0.5686664771111744	60	0	2.3405500292568755	66	0	unmethylated (<10%)	P70490	Lactadherin (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (O-acetyl GD3 ganglioside synthase) (AGS) (SED1)	apoptotic cell clearance [GO:0043277]; phagocytosis, engulfment [GO:0006911]; phagocytosis, recognition [GO:0006910]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of phagocytosis [GO:0050766]; response to estrogen [GO:0043627]	hit with GO BP
GN014716	Chromosome_6A	24396	19	237	34.20232825053287	0.33218992419532944	65.3246475865015	158	0.8037974683544303	87.37737083060824	34	0.9705882352941176	61.02105934907466	124	0.7580645161290323	78.6488740617181	15	0.9333333333333333	methylated (>=50%)	Q6ZXV5	Protein O-mannosyl-transferase TMTC3 (EC 2.4.1.109) (Protein SMILE) (Transmembrane O-mannosyltransferase targeting cadherins 3) (Transmembrane and tetratricopeptide repeat-containing 3)	positive regulation of proteasomal protein catabolic process [GO:1901800]; protein O-linked glycosylation via mannose [GO:0035269]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN010799	Chromosome_6A	369	1	13	38.75338753387534	1.0137362637362637	0.6180469715698393	13	0	0.6180469715698393	13	0	NA	NA	NA	0.3181336161187699	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014717	Chromosome_6A	825	1	35	41.81818181818182	0.9755067567567568	0.41189931350114417	35	0	0.41189931350114417	35	0	NA	NA	NA	0.7420675537359263	56	0	unmethylated (<10%)	Q6XD76	Achaete-scute homolog 4 (ASH-4) (hASH4) (Achaete-scute-like protein 4) (Class A basic helix-loop-helix protein 44) (bHLHa44)	epithelium development [GO:0060429]; regulation of transcription by RNA polymerase II [GO:0006357]; skin development [GO:0043588]	hit with GO BP
GN014718	Chromosome_6A	4208	3	72	33.62642585551331	0.6071711997691365	87.8877400295421	72	0.9861111111111112	72.59136212624584	9	0.8888888888888888	89.8005816368924	63	1	85.73416840640223	33	1	methylated (>=50%)	Q2M2T3	Mitochondrial pyruvate carrier-like protein (Brain protein 44-like protein 2)	pyruvate import into mitochondria [GO:0006850]	hit with GO BP
GN014719	Chromosome_6A	14296	11	157	36.135982092893116	0.33727479169697094	83.76494023904382	131	0.8854961832061069	87.72112382934444	27	0.9259259259259259	83.13828910499423	104	0.875	34.70437017994858	20	0.35	methylated (>=50%)	Q8HXM1	Cleavage stimulation factor subunit 2 (CF-1 64 kDa subunit) (Cleavage stimulation factor 64 kDa subunit) (CSTF 64 kDa subunit) (CstF-64)	mRNA 3'-end processing [GO:0031124]	hit with GO BP
GN014720	Chromosome_6A	14284	4	189	37.60851302156259	0.37463593506197224	86.0816626430146	188	0.9202127659574468	30.994152046783626	7	0.2857142857142857	88.13282525857376	181	0.9447513812154696	4.7484053862508855	18	0.05555555555555555	methylated (>=50%)	Q9UMY4	Sorting nexin-12	endocytic recycling [GO:0032456]; late endosome to Golgi transport [GO:0034499]; negative regulation of early endosome to late endosome transport [GO:2000642]; negative regulation of gene expression [GO:0010629]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of protein processing [GO:0010955]; negative regulation of protein transport [GO:0051224]; regulation of endocytosis [GO:0030100]	hit with GO BP
GN014721	Chromosome_6A	31157	9	462	34.86535930930449	0.48799520064320495	85.30145270902176	455	0.9626373626373627	90.10538641686183	31	0.9354838709677419	85.03128086927889	424	0.964622641509434	1.5813953488372092	22	0	methylated (>=50%)	P52900	Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (PDHE1-A) (EC 1.2.4.1)	pyruvate decarboxylation to acetyl-CoA [GO:0006086]	hit with GO BP
GN014722	Chromosome_6A	255	1	0	48.627450980392155	0	NA	0	NA	NA	NA	NA	NA	NA	NA	87.69017980636238	21	0.9523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN014723	Chromosome_6A	417	1	8	44.84412470023981	0.392378263937897	0.7692307692307693	8	0	0.7692307692307693	8	0	NA	NA	NA	1.5421115065243178	42	0	unmethylated (<10%)	Q8NBX0	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN014724	Chromosome_6A	19572	12	521	35.92376864909054	0.8250972322175452	0.8158467867390328	519	0	1.0935992280476037	88	0	0.7823998760554651	431	0	0.8382489909965849	45	0	unmethylated (<10%)	Q94KD8	Probable beta-D-xylosidase 2 (AtBXL2) (EC 3.2.1.-)	xylan catabolic process [GO:0045493]	hit with GO BP
GN014725	Chromosome_6A	25535	9	628	36.334442921480324	0.7452192702158406	1.7880794701986755	628	0	0.6211180124223602	64	0	1.870547320795489	564	0	1.13345521023766	54	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN014726	Chromosome_6A	975	1	40	50.256410256410255	0.8100697906281157	1.0335917312661498	21	0	1.0335917312661498	21	0	NA	NA	NA	0.4096495220755576	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014727	Chromosome_6A	1362	1	53	41.99706314243759	0.8843397405270315	0.8183306055646481	53	0	0.8183306055646481	53	0	NA	NA	NA	0.4711425206124853	47	0	unmethylated (<10%)	Q7KVW5	Small conductance calcium-activated potassium channel protein (Protein SK) (dSK)	potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of membrane potential in photoreceptor cell [GO:0016057]	hit with GO BP
GN014728	Chromosome_6A	510	1	13	39.411764705882355	0.6943862589023879	0.596252129471891	13	0	0.596252129471891	13	0	NA	NA	NA	0.35655512890839275	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014729	Chromosome_6A	1353	1	56	41.46341463414634	0.9635036496350365	0.7441327990841442	56	0	0.7441327990841442	56	0	NA	NA	NA	0.4868913857677903	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014730	Chromosome_6A	1431	1	57	42.138364779874216	0.898611876170541	0.2978723404255319	57	0	0.2978723404255319	57	0	NA	NA	NA	0.6875	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014731	Chromosome_6A	14200	4	290	34.943661971830984	0.6700989575714104	84.14227985256895	290	0.9655172413793104	89.85365853658537	19	1	83.8699171861915	271	0.9630996309963099	72.83763277693475	27	0.9629629629629629	methylated (>=50%)	A6QLI8	General transcription factor IIE subunit 1 (Transcription initiation factor IIE subunit alpha) (TFIIE-alpha)	transcription initiation at RNA polymerase II promoter [GO:0006367]	hit with GO BP
GN014732	Chromosome_6A	162	1	1	53.08641975308642	1.9058823529411764	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014733	Chromosome_6A	450	1	8	54	1.4106583072100314	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014734	Chromosome_6A	450	1	8	54	1.4106583072100314	NA	0	NA	NA	NA	NA	NA	NA	NA	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014735	Chromosome_6A	5485	3	124	35.387420237010026	0.7227842720510096	1.7796967144060658	124	0	0.8152173913043478	11	0	1.8185801928133216	113	0	1.3770180436847104	43	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN014736	Chromosome_6A	1963	2	46	36.01630157921549	0.7258098223615465	0.4141739530602853	46	0	0.7843137254901961	18	0	0.30066145520144316	28	0	0.6430868167202572	63	0	unmethylated (<10%)	Q7Z0T3	Temptin	NA	hit, no GO BP
GN014737	Chromosome_6A	2175	1	23	40.59770114942529	0.2566490180385397	91.96428571428571	22	1	91.96428571428571	22	1	NA	NA	NA	91.12627986348123	13	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014738	Chromosome_6A	11762	5	312	36.87298078558069	0.7808570706327044	0.975609756097561	312	0	0.4763795156808257	101	0	1.0898192716374535	211	0	2.588686481303931	40	0	unmethylated (<10%)	Q19673	Putative tyrosinase-like protein tyr-3	NA	hit, no GO BP
GN014739	Chromosome_6A	4986	3	97	34.11552346570397	0.685503622818655	2.3025397711415017	96	0	3.484848484848485	28	0	2.0355798836811494	68	0	2.9754959159859977	56	0	unmethylated (<10%)	Q8ITC7	Neuropeptides capa receptor (Cap2b receptor) (Capability receptor)	body fluid secretion [GO:0007589]; cellular response to desiccation [GO:0071465]; G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]; positive regulation of calcium ion transport [GO:0051928]	hit with GO BP
GN014740	Chromosome_6A	93133	15	1136	32.76067559296919	0.4556761103468923	75.59350106475274	1057	0.9044465468306528	74.72353870458136	37	0.8918918918918919	75.61577350859454	1020	0.9049019607843137	85.49763033175356	16	1	methylated (>=50%)	Q9JLB4	Cubilin (Intrinsic factor-cobalamin receptor)	cobalamin catabolic process [GO:0042366]; cobalamin transport [GO:0015889]; endocytic hemoglobin import into cell [GO:0020028]; in utero embryonic development [GO:0001701]; lipoprotein transport [GO:0042953]; receptor-mediated endocytosis [GO:0006898]; response to bacterium [GO:0009617]; response to nutrient [GO:0007584]	hit with GO BP
GN014741	Chromosome_6A	342	1	8	42.98245614035088	0.5191650853889943	1.5384615384615385	8	0	1.5384615384615385	8	0	NA	NA	NA	1.238164603058995	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019068	Chromosome_6A	1514	5	36	37.18626155878468	0.693964858670741	88.8175494917068	36	1	89.54248366013071	31	1	85.54572271386431	5	1	72.48716067498165	36	0.7222222222222222	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003586	Chromosome_6A	292	1	7	41.78082191780822	0.5677777777777778	0.6906077348066298	7	0	0.6906077348066298	7	0	NA	NA	NA	0.9316770186335404	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014742	Chromosome_6A	291	1	5	43.29896907216495	0.3760661669682088	0.7575757575757576	5	0	0.7575757575757576	5	0	NA	NA	NA	0.9536784741144414	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014743	Chromosome_6A	786	1	35	42.62086513994911	0.9825	0.7782101167315175	9	0	0.7782101167315175	9	0	NA	NA	NA	1.5234197362437472	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018471	Chromosome_6A	663	1	24	41.77978883861237	0.8400380107697181	90.63275434243177	24	1	90.63275434243177	24	1	NA	NA	NA	80.712890625	29	0.9310344827586207	methylated (>=50%)	Q8IY51	Tigger transposable element-derived protein 4	NA	hit, no GO BP
GN014744	Chromosome_6A	25892	10	452	34.69025181523251	0.5812941461574915	84.19909389933594	452	0.9469026548672567	78.87579329102448	24	0.7916666666666666	84.38775182341034	428	0.955607476635514	10.770676691729323	67	0	methylated (>=50%)	Q8BH60	Golgi-associated PDZ and coiled-coil motif-containing protein (CFTR-associated ligand) (PDZ protein interacting specifically with TC10) (PIST)	autophagy [GO:0006914]; gene expression [GO:0010467]; negative regulation of anion channel activity [GO:0010360]; negative regulation of protein localization to cell surface [GO:2000009]; spermatid nucleus differentiation [GO:0007289]	hit with GO BP
GN014745	Chromosome_6A	441	1	23	41.26984126984127	1.287019413779977	0.4433696090286175	23	0	0.4433696090286175	23	0	NA	NA	NA	5.430327868852459	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014746	Chromosome_6A	5404	2	164	39.71132494448557	0.8585222957578388	0.5438477226376615	92	0	0.5475701574264202	91	0	0	1	0	0.32454361054766734	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014747	Chromosome_6A	17300	7	415	33.3757225433526	0.8639793593231129	0.9207090834134946	414	0	0.466893039049236	43	0	0.975609756097561	371	0	0.6806579693703914	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014748	Chromosome_6A	567	1	16	47.795414462081126	0.49606299212598426	9.05511811023622	16	0	9.05511811023622	16	0	NA	NA	NA	1.0452961672473868	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014749	Chromosome_6A	696	2	17	44.39655172413793	0.5007194244604316	0	3	0	0	2	0	0	1	0	0.7763975155279503	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014750	Chromosome_6A	44548	13	588	35.572865224028014	0.41802085017953805	84.41283124128313	556	0.8974820143884892	93.68013757523646	46	1	83.76983653501969	510	0.888235294117647	53.439153439153436	23	0.6086956521739131	methylated (>=50%)	Q92738	USP6 N-terminal-like protein (Related to the N-terminus of tre) (RN-tre)	Golgi organization [GO:0007030]; plasma membrane to endosome transport [GO:0048227]; positive regulation of GTPase activity [GO:0043547]; regulation of Golgi organization [GO:1903358]; retrograde transport, plasma membrane to Golgi [GO:0035526]; virion assembly [GO:0019068]	hit with GO BP
GN014751	Chromosome_6A	669	1	0	40.20926756352765	0	NA	0	NA	NA	NA	NA	NA	NA	NA	91.63179916317992	10	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014752	Chromosome_6A	576	1	25	44.09722222222222	0.8983717012914093	0.46029919447640966	25	0	0.46029919447640966	25	0	NA	NA	NA	0.41273584905660377	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014753	Chromosome_6A	1463	3	51	38.414217361585784	0.9459051724137931	0.9417509591907918	51	0	1.1940298507462686	35	0	0.3500583430571762	16	0	0.5160550458715596	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014754	Chromosome_6A	28267	4	479	38.29907666183182	0.4974551331603126	57.46478873239437	368	0.75	46.37362637362637	10	0.7	57.71991911021234	358	0.7513966480446927	0.7352941176470589	71	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014755	Chromosome_6A	1182	1	25	55.414551607445006	0.338744067680033	4.545454545454546	2	0	4.545454545454546	2	0	NA	NA	NA	1.0869565217391304	28	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014756	Chromosome_6A	1869	2	34	38.46976993044409	0.495740498034076	30.733137829912025	34	0.29411764705882354	20.928462709284627	29	0.20689655172413793	63.68286445012788	5	0.8	0.5016722408026756	42	0	sparse (10-50%)	Q16533	snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (Proximal sequence element-binding transcription factor subunit gamma) (PSE-binding factor subunit gamma) (PTF subunit gamma) (Small nuclear RNA-activating complex polypeptide 1) (snRNA-activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit)	snRNA transcription by RNA polymerase II [GO:0042795]; snRNA transcription by RNA polymerase III [GO:0042796]	hit with GO BP
GN014757	Chromosome_6A	1002	1	9	47.50499001996008	0.16407401342721467	51.785714285714285	9	0.5555555555555556	51.785714285714285	9	0.5555555555555556	NA	NA	NA	58.45410628019324	11	0.7272727272727273	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014758	Chromosome_6A	369	1	12	46.883468834688344	0.5918203688853247	1.0869565217391304	12	0	1.0869565217391304	12	0	NA	NA	NA	1.042654028436019	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014759	Chromosome_6A	29926	14	271	36.643721178907974	0.2734181231841468	74.48562841951144	261	0.8122605363984674	72.52252252252252	29	0.8275862068965517	74.75269193731944	232	0.8103448275862069	0.3919007184846506	55	0	methylated (>=50%)	A2BE28	Ribosomal biogenesis protein LAS1L (Endoribonuclease LAS1L) (EC 3.1.-.-) (Protein LAS1 homolog)	maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]; rRNA processing [GO:0006364]	hit with GO BP
GN014760	Chromosome_6A	8474	4	201	35.2017937219731	0.7664740664740665	1.8059138717999603	200	0	2.8085735402808574	28	0	1.6504297994269341	172	0	0.16116035455278002	22	0	unmethylated (<10%)	Q9TT23	Melanocortin receptor 5 (MC5-R)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; negative regulation of immune response [GO:0050777]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of exocytosis [GO:0045921]; temperature homeostasis [GO:0001659]	hit with GO BP
GN014761	Chromosome_6A	9645	5	281	36.97252462415759	0.8526644140742978	0.957771005659556	281	0	0.509090909090909	84	0	1.1494252873563218	197	0	0.45540796963946867	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014762	Chromosome_6A	339	1	10	40.41297935103245	0.7225063938618926	0.5617977528089888	10	0	0.5617977528089888	10	0	NA	NA	NA	0.8616780045351474	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014763	Chromosome_6A	534	1	7	41.19850187265918	0.3095652173913043	1.0869565217391304	7	0	1.0869565217391304	7	0	NA	NA	NA	0.8241758241758241	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014764	Chromosome_6A	2847	2	30	37.16192483315771	0.307053494391717	3.2067510548523206	30	0	4.050925925925926	22	0	0.9345794392523364	8	0	1.4067995310668229	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014765	Chromosome_6A	18973	20	255	35.603225636430714	0.426793960806108	87.514033680834	221	0.9547511312217195	89.73497573721538	56	0.9285714285714286	86.90634255949341	165	0.9636363636363636	1.1013215859030836	58	0	methylated (>=50%)	Q2KJC1	Cell division cycle 5-like protein (Cdc5-like protein)	DNA damage checkpoint signaling [GO:0000077]; mRNA splicing, via spliceosome [GO:0000398]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN014766	Chromosome_6A	2823	1	92	39.42614240170032	0.8401242155657631	0.4481940416556815	92	0	0.4481940416556815	92	0	NA	NA	NA	0.666928207140055	64	0	unmethylated (<10%)	Q18297	Transient receptor potential cation channel subfamily A member 1 homolog	NA	hit, no GO BP
GN014767	Chromosome_6A	4149	1	106	38.39479392624729	0.7005654937317808	0.4357298474945534	106	0	0.4357298474945534	106	0	NA	NA	NA	0.7279344858962693	48	0	unmethylated (<10%)	Q5VYY1	Ankyrin repeat domain-containing protein 22	immune response [GO:0006955]; leukocyte migration [GO:0050900]; response to wounding [GO:0009611]	hit with GO BP
GN014768	Chromosome_6A	2323	2	67	39.259578131726215	0.7511377511377512	0.5723006486074017	67	0	0.5625270445694505	61	0	0.6451612903225806	6	0	0.6052631578947368	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014769	Chromosome_6A	735	1	17	38.775510204081634	0.6180747922437673	0.5148005148005148	17	0	0.5148005148005148	17	0	NA	NA	NA	0.6072874493927125	64	0	unmethylated (<10%)	Q9Z2F6	B-cell lymphoma 3 protein homolog (BCL-3)	antimicrobial humoral response [GO:0019730]; canonical NF-kappaB signal transduction [GO:0007249]; defense response to bacterium [GO:0042742]; defense response to protozoan [GO:0042832]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extracellular matrix organization [GO:0030198]; follicular dendritic cell differentiation [GO:0002268]; germinal center formation [GO:0002467]; humoral immune response mediated by circulating immunoglobulin [GO:0002455]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; marginal zone B cell differentiation [GO:0002315]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; positive regulation of type II interferon production [GO:0032729]; protein import into nucleus [GO:0006606]; regulation of apoptotic process [GO:0042981]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]; response to UV-C [GO:0010225]; response to virus [GO:0009615]; spleen development [GO:0048536]; T-helper 1 type immune response [GO:0042088]; T-helper 2 cell differentiation [GO:0045064]	hit with GO BP
GN014770	Chromosome_6A	1158	1	34	38.428324697754746	0.8095238095238095	0.6153846153846154	34	0	0.6153846153846154	34	0	NA	NA	NA	0.9455493968046952	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014771	Chromosome_6A	981	1	33	41.28440366972477	0.7902792696025779	3.0235162374020157	33	0	3.0235162374020157	33	0	NA	NA	NA	0.5512172714745062	59	0	unmethylated (<10%)	Q9CQM6	Ankyrin repeat domain-containing protein 61	NA	hit, no GO BP
GN014772	Chromosome_6A	32428	25	408	36.622671765141234	0.37670256618014536	79.57043716123803	395	0.9215189873417722	87.88204907447266	94	0.9361702127659575	77.01225571381252	301	0.9169435215946844	16.905901116427433	10	0	methylated (>=50%)	P11533	Dystrophin	muscle cell development [GO:0055001]; neuron development [GO:0048666]; regulation of muscle system process [GO:0090257]; skeletal muscle tissue development [GO:0007519]; synaptic signaling [GO:0099536]	hit with GO BP
GN014773	Chromosome_6A	171	1	8	42.69005847953216	1.0426829268292683	0.966183574879227	8	0	0.966183574879227	8	0	NA	NA	NA	0.2824858757062147	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014774	Chromosome_6A	435	1	10	44.367816091954026	0.49931129476584024	37.30569948186528	10	0.4	37.30569948186528	10	0.4	NA	NA	NA	0.8950770760815515	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014775	Chromosome_6A	2698	5	24	36.8421052631579	0.26330513988288873	0.8748906386701663	24	0	0.8547008547008547	7	0	0.8838383838383839	17	0	0.8624708624708625	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011526	Chromosome_6A	1194	4	46	39.698492462311556	0.9803480589022757	0.49603174603174605	46	0	0.4108463434675431	35	0	0.6257822277847309	11	0	0.8842221608179055	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014776	Chromosome_6A	1872	2	34	43.8034188034188	0.38636363636363635	0.5401234567901234	34	0	0.5813953488372093	31	0	0	3	0	1.0656010656010657	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014777	Chromosome_6A	7826	7	85	36.532072578584206	0.32695842794931534	72.87049399198932	84	0.8333333333333334	83.60413589364845	25	0.96	68.8770837149661	59	0.7796610169491526	70.69408740359897	26	0.8846153846153846	methylated (>=50%)	Q63HN8	E3 ubiquitin-protein ligase RNF213 (EC 2.3.2.27) (EC 3.6.4.-) (ALK lymphoma oligomerization partner on chromosome 17) (E3 ubiquitin-lipopolysaccharide ligase RNF213) (EC 2.3.2.-) (Mysterin) (RING finger protein 213)	angiogenesis [GO:0001525]; defense response to bacterium [GO:0042742]; lipid droplet formation [GO:0140042]; lipid ubiquitination [GO:0120323]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein autoubiquitination [GO:0051865]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; regulation of lipid metabolic process [GO:0019216]; sprouting angiogenesis [GO:0002040]; ubiquitin-dependent protein catabolic process [GO:0006511]; xenophagy [GO:0098792]	hit with GO BP
GN014778	Chromosome_6A	20013	12	310	35.68680357767451	0.4872941262962244	69.2489758761948	278	0.7985611510791367	68.79899655064284	42	0.8571428571428571	69.3253820350354	236	0.788135593220339	77.54189944134079	39	0.8974358974358975	methylated (>=50%)	E9Q555	E3 ubiquitin-protein ligase RNF213 (EC 2.3.2.27) (EC 3.6.4.-) (E3 ubiquitin-lipopolysaccharide ligase RNF213) (EC 2.3.2.-) (Mysterin) (RING finger protein 213)	angiogenesis [GO:0001525]; defense response to bacterium [GO:0042742]; lipid droplet formation [GO:0140042]; lipid ubiquitination [GO:0120323]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein autoubiquitination [GO:0051865]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; regulation of lipid metabolic process [GO:0019216]; sprouting angiogenesis [GO:0002040]; ubiquitin-dependent protein catabolic process [GO:0006511]; xenophagy [GO:0098792]	hit with GO BP
GN014779	Chromosome_6A	19275	24	261	36.59662775616083	0.40766365782143094	53.273978146499395	259	0.6872586872586872	77.03024125042474	86	0.8023255813953488	45.84572885677858	173	0.63005780346820806	77.89473684210526	27	0.8888888888888888	methylated (>=50%)	A0A0R4IBK5	E3 ubiquitin-protein ligase rnf213-alpha (EC 2.3.2.27) (EC 3.6.4.-) (E3 ubiquitin-lipopolysaccharide ligase rnf213-alpha) (EC 2.3.2.-) (Mysterin-A) (Mysterin-alpha) (RING finger protein 213-A) (RING finger protein 213-alpha)	blood circulation [GO:0008015]; defense response to bacterium [GO:0042742]; lipid droplet formation [GO:0140042]; lipid ubiquitination [GO:0120323]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein K63-linked ubiquitination [GO:0070534]; regulation of angiogenesis [GO:0045765]; regulation of lipid metabolic process [GO:0019216]; sprouting angiogenesis [GO:0002040]; ubiquitin-dependent protein catabolic process [GO:0006511]; xenophagy [GO:0098792]	hit with GO BP
GN014780	Chromosome_6A	17879	24	248	35.99194585826948	0.4352571064636484	89.58988230133782	248	0.9838709677419355	87.12483688560243	57	0.9824561403508771	90.08787346221442	191	0.9842931937172775	70.87794432548179	64	0.859375	methylated (>=50%)	A0A0R4IBK5	E3 ubiquitin-protein ligase rnf213-alpha (EC 2.3.2.27) (EC 3.6.4.-) (E3 ubiquitin-lipopolysaccharide ligase rnf213-alpha) (EC 2.3.2.-) (Mysterin-A) (Mysterin-alpha) (RING finger protein 213-A) (RING finger protein 213-alpha)	blood circulation [GO:0008015]; defense response to bacterium [GO:0042742]; lipid droplet formation [GO:0140042]; lipid ubiquitination [GO:0120323]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein K63-linked ubiquitination [GO:0070534]; regulation of angiogenesis [GO:0045765]; regulation of lipid metabolic process [GO:0019216]; sprouting angiogenesis [GO:0002040]; ubiquitin-dependent protein catabolic process [GO:0006511]; xenophagy [GO:0098792]	hit with GO BP
GN014781	Chromosome_6A	73232	27	718	36.130380161677955	0.3043523812308811	85.32386105071548	686	0.9548104956268222	93.49152542372882	87	1	84.29502690085116	599	0.9482470784641068	92.96898079763663	38	1	methylated (>=50%)	Q8BHY3	Anoctamin-1 (Transmembrane protein 16A)	cellular response to heat [GO:0034605]; cellular response to peptide [GO:1901653]; chloride transmembrane transport [GO:1902476]; chloride transport [GO:0006821]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; glial cell projection elongation [GO:0106091]; iodide transport [GO:0015705]; mucus secretion [GO:0070254]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; protein localization to membrane [GO:0072657]; regulation of membrane potential [GO:0042391]; trachea development [GO:0060438]	hit with GO BP
GN014782	Chromosome_6A	6759	5	145	36.30714602751886	0.6515629986171684	0.684931506849315	145	0	0.5683717820127048	75	0	0.7658389417498259	70	0	0.7807807807807807	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014783	Chromosome_6A	879	1	16	40.955631399317404	0.43671593590858276	87.35440931780366	16	1	87.35440931780366	16	1	NA	NA	NA	56.36856368563686	14	0.6428571428571429	methylated (>=50%)	Q6NS09	Transmembrane protein 45B	response to pain [GO:0048265]	hit with GO BP
GN014784	Chromosome_6A	315	1	16	49.20634920634921	0.8898305084745762	0.33112582781456956	16	0	0.33112582781456956	16	0	NA	NA	NA	0.7515473032714411	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011478	Chromosome_6A	321	1	11	54.205607476635514	0.5248216409036861	1.9607843137254901	11	0	1.9607843137254901	11	0	NA	NA	NA	0.6082725060827251	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014785	Chromosome_6A	315	1	15	48.888888888888886	0.8429973238180196	0.14705882352941177	15	0	0.14705882352941177	15	0	NA	NA	NA	0.7993268826251577	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014786	Chromosome_6A	204	1	7	43.13725490196079	0.737984496124031	1.0135135135135136	7	0	1.0135135135135136	7	0	NA	NA	NA	1.4135702746365104	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014787	Chromosome_6A	318	1	5	40.56603773584906	0.38498789346246975	55.79710144927536	5	0.6	55.79710144927536	5	0.6	NA	NA	NA	33.68298368298368	14	0.21428571428571427	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013343	Chromosome_6A	385	1	7	57.142857142857146	0.22754137115839243	1.8867924528301887	4	0	1.8867924528301887	4	0	NA	NA	NA	1.244343891402715	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014788	Chromosome_6A	5870	8	67	37.46166950596252	0.32542087347069815	49.98402045381911	67	0.6119402985074627	57.06984667802385	24	0.75	45.728900255754475	43	0.5348837209302325	0.3770423125261835	55	0	sparse (10-50%)	Q8C790	Protein FAM221A	NA	hit, no GO BP
GN014789	Chromosome_6A	16978	13	219	34.35622570385205	0.4394811586699904	86.78761114758012	212	0.9952830188679245	94.25651867512333	49	1	85.26474603060565	163	0.9938650306748467	29.893455098934552	57	0.3157894736842105	methylated (>=50%)	Q9QX47	Protein SON (Negative regulatory element-binding protein) (NRE-binding protein)	microtubule cytoskeleton organization [GO:0000226]; mitotic cytokinesis [GO:0000281]; mRNA processing [GO:0006397]; negative regulation of apoptotic process [GO:0043066]; regulation of cell cycle [GO:0051726]; regulation of mRNA splicing, via spliceosome [GO:0048024]; regulation of RNA splicing [GO:0043484]	hit with GO BP
GN014790	Chromosome_6A	1767	1	74	43.576683644595356	0.8821648316062176	0.576662143826323	74	0	0.576662143826323	74	0	NA	NA	NA	0.6405693950177936	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014791	Chromosome_6A	390	1	19	37.94871794871795	1.438276397515528	0.46475600309837334	19	0	0.46475600309837334	19	0	NA	NA	NA	1.941747572815534	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014792	Chromosome_6A	390	1	19	38.205128205128204	1.4130434782608696	0.47393364928909953	19	0	0.47393364928909953	19	0	NA	NA	NA	0.7046764894298526	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014793	Chromosome_6A	390	1	19	38.205128205128204	1.4039408866995073	0.5681818181818182	19	0	0.5681818181818182	19	0	NA	NA	NA	0.4394224733207784	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014794	Chromosome_6A	5164	5	74	35.36018590240124	0.46084178612732796	91.29825965193038	74	1	91.57894736842105	11	1	91.2621359223301	63	1	69.59544879898863	38	0.8157894736842105	methylated (>=50%)	Q6DFS6	Charged multivesicular body protein 2a (Chromatin-modifying protein 2a) (CHMP2a)	exit from mitosis [GO:0010458]; late endosome to vacuole transport [GO:0045324]; nuclear membrane reassembly [GO:0031468]	hit with GO BP
GN014795	Chromosome_6A	13427	17	180	36.35212631265361	0.4084037703073091	93.96188381894814	177	0.9887005649717514	95.88558855885589	82	1	92.58910346993248	95	0.9789473684210527	94.62528387585162	22	1	methylated (>=50%)	O75534	Cold shock domain-containing protein E1 (N-ras upstream gene protein) (Protein UNR)	CRD-mediated mRNA stabilization [GO:0070934]; IRES-dependent viral translational initiation [GO:0075522]; male gonad development [GO:0008584]; negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900152]; nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; positive regulation of cytoplasmic translation [GO:2000767]; positive regulation of translation [GO:0045727]; regulation of translational initiation [GO:0006446]; stress granule assembly [GO:0034063]	hit with GO BP
GN014796	Chromosome_6A	13800	9	228	36.094202898550726	0.5075239817340402	88.2465597957157	223	0.9775784753363229	86.89393939393939	25	1	88.3862889341055	198	0.9747474747474747	16.26585045911675	34	0.17647058823529413	methylated (>=50%)	O60678	Protein arginine N-methyltransferase 3 (EC 2.1.1.319) (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 3)	negative regulation of protein ubiquitination [GO:0031397]; negative regulation of retinoic acid biosynthetic process [GO:1900053]; positive regulation of osteoblast differentiation [GO:0045669]; protein methylation [GO:0006479]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN014797	Chromosome_6A	1617	1	0	50.46382189239332	0	NA	0	NA	NA	NA	NA	NA	NA	NA	90.20852221214868	17	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014798	Chromosome_6A	19287	10	169	34.70731580857572	0.29220408816406446	69.18515489213782	169	0.8402366863905325	77.39525820071452	65	0.9846153846153847	65.41330945986273	104	0.75	86.4461738002594	38	0.9736842105263158	methylated (>=50%)	Q80T23	Synaptotagmin-like protein 5	exocytosis [GO:0006887]; intracellular protein transport [GO:0006886]	hit with GO BP
GN014799	Chromosome_6A	3494	4	115	39.639381797366916	0.8394020297230335	0.592478104070067	109	0	0.5046257359125316	75	0	0.7313829787234043	34	0	0.499457111834962	53	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN014800	Chromosome_6A	2964	2	99	39.5748987854251	0.8531306693957297	0.5449591280653951	99	0	0.6372325898953118	73	0	0.3616636528028933	26	0	0.7555555555555555	48	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN014801	Chromosome_6A	689	2	14	39.33236574746009	0.5274496937882764	0.5326231691078562	14	0	0.5689900426742532	13	0	0	1	0	0.6666666666666666	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014802	Chromosome_6A	682	2	12	37.976539589442815	0.4885970149253731	0.5882352941176471	12	0	0.7117437722419929	9	0	0.4366812227074236	3	0	3.85470719051149	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014803	Chromosome_6A	22183	25	281	35.66244421403778	0.4009225674437463	73.86226944667202	277	0.8700361010830325	81.18203309692672	74	0.918918918918919	71.89288894542679	203	0.8522167487684729	0.5621925509486999	37	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014804	Chromosome_6A	444	1	29	50	1.0732683170792698	0.8787346221441125	29	0	0.8787346221441125	29	0	NA	NA	NA	60.46601941747573	41	0.6585365853658537	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014805	Chromosome_6A	33558	18	479	35.4460933309494	0.45450068233283863	71.20866879335662	458	0.87117903930131	62.74076413009157	49	0.6938775510204082	71.94682227299	409	0.8924205378973105	92.79700654817587	18	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014806	Chromosome_6A	534	1	18	39.13857677902622	0.919104991394148	1.317829457364341	18	0	1.317829457364341	18	0	NA	NA	NA	2.7696793002915454	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014807	Chromosome_6A	43961	36	678	35.50647164532199	0.4894665422011285	83.7943686358577	674	0.9421364985163204	83.26486486486486	80	0.9125	83.85016746793046	594	0.9461279461279462	67.23226703755216	59	0.6779661016949152	methylated (>=50%)	E1C1R4	Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.4.19.12) (Deubiquitinating enzyme 47) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47)	base-excision repair [GO:0006284]; DNA damage response [GO:0006974]; monoubiquitinated protein deubiquitination [GO:0035520]	hit with GO BP
GN014808	Chromosome_6A	3508	5	51	33.97947548460662	0.5052085833613364	91.94248507867607	51	1	92.67015706806282	4	1	91.90271816881258	47	1	46.13646633529146	35	0.5142857142857142	methylated (>=50%)	Q2TBP7	c-Myc-binding protein (Associate of Myc 1) (AMY-1)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN014809	Chromosome_6A	19354	7	524	35.233026764493125	0.8725045877163625	5.680206318504191	522	0.01532567049808429	0.29143897996357016	59	0	6.203359858532273	463	0.017278617710583154	36.492890995260666	36	0.3888888888888889	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014810	Chromosome_6A	493	2	15	40.16227180527383	0.7552083333333334	93.70932754880694	15	1	94.90616621983914	13	1	88.63636363636364	2	1	94.94949494949495	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014811	Chromosome_6A	3605	3	46	37.9750346740638	0.35399722489059665	87.69146608315098	46	0.9347826086956522	91.17647058823529	8	1	87.08226221079691	38	0.9210526315789473	97.48790043788891	53	1	methylated (>=50%)	Q9DFQ7	Large ribosomal subunit protein eL24 (60S ribosomal protein L24)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN014812	Chromosome_6A	189	1	21	53.96825396825397	1.5259515570934257	0.6028636021100227	21	0	0.6028636021100227	21	0	NA	NA	NA	0.5852842809364549	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014813	Chromosome_6A	792	1	33	40.53030303030303	1.0174400498287137	0.7672634271099744	27	0	0.7672634271099744	27	0	NA	NA	NA	2.8350515463917527	13	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN014814	Chromosome_6A	678	1	26	39.233038348082594	1.0061643835616438	0.45045045045045046	20	0	0.45045045045045046	20	0	NA	NA	NA	0.6203955021326095	90	0	unmethylated (<10%)	Q5XJP0	Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase B (EC 2.4.1.206) (Lactotriaosylceramide synthase B) (Lc(3)Cer synthase B) (Lc3 synthase B) (UDP-GlcNAc:beta-Gal beta-1,3-N-acetylglucosaminyltransferase 5B) (BGnT-5B) (Beta-1,3-Gn-T5B) (Beta-1,3-N-acetylglucosaminyltransferase 5B) (Beta3Gn-T5B)	glycoprotein biosynthetic process [GO:0009101]; sphingolipid biosynthetic process [GO:0030148]	hit with GO BP
GN014815	Chromosome_6A	2333	3	10	33.21903129018431	0.15544628341462113	15.09433962264151	3	0	NA	NA	NA	15.09433962264151	3	0	0.6622516556291391	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014816	Chromosome_6A	861	4	19	40.882694541231125	0.547361729179911	16.384180790960453	16	0	16.012084592145015	14	0	21.73913043478261	2	0	0.4548408057179987	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014817	Chromosome_6A	1014	1	40	40.532544378698226	0.9625059326056004	0.7662835249042146	40	0	0.7662835249042146	40	0	NA	NA	NA	0.5964214711729622	87	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN011512	Chromosome_6A	336	1	1	43.154761904761905	0.06444188722669736	0	1	0	0	1	0	NA	NA	NA	0.7115489874110563	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014818	Chromosome_6A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014819	Chromosome_6A	2908	4	60	37.62035763411279	0.5869352413438153	5.364238410596027	43	0	10.679611650485437	16	0	3.996669442131557	27	0	2.4813895781637716	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003223	Chromosome_6A	310	1	0	40.645161290322584	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8371824480369515	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001778	Chromosome_6A	417	1	2	43.405275779376495	0.10198092443140132	6.779661016949152	2	0	6.779661016949152	2	0	NA	NA	NA	0.38580246913580246	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014820	Chromosome_6A	3577	5	104	35.420743639921724	0.9284601868860315	0.7270964614638875	104	0	1.951219512195122	19	0	0.5920344456404736	85	0	0.33112582781456956	61	0	unmethylated (<10%)	P86854	Perlucin-like protein	NA	hit, no GO BP
GN019871	Chromosome_6A	381	2	17	45.14435695538058	0.9258147512864494	35.15509601181684	17	0	35.313001605136435	16	0	33.333333333333336	1	0	61.961274203622736	22	0.7727272727272727	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014821	Chromosome_6A	660	1	8	40.75757575757576	0.2957983193277311	80.9651474530831	8	1	80.9651474530831	8	1	NA	NA	NA	88.73642081189251	26	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016098	Chromosome_6A	675	2	26	40.44444444444444	0.9425349087003222	1.125703564727955	26	0	1.2591815320041972	23	0	0	3	0	1.5357353809805079	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014822	Chromosome_6A	609	1	18	40.722495894909684	0.7175962293794187	0.5861664712778429	18	0	0.5861664712778429	18	0	NA	NA	NA	0.881201044386423	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014823	Chromosome_6A	267	1	13	41.947565543071164	1.107177033492823	1.0471204188481675	13	0	1.0471204188481675	13	0	NA	NA	NA	0.36642238507661556	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014824	Chromosome_6A	396	1	14	37.121212121212125	1.056805184902783	0.684931506849315	14	0	0.684931506849315	14	0	NA	NA	NA	0.49575070821529743	61	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN014825	Chromosome_6A	627	1	13	40.19138755980861	0.5381263616557734	1.1650485436893203	13	0	1.1650485436893203	13	0	NA	NA	NA	0.686641697877653	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014826	Chromosome_6A	13230	9	254	33.87755102040816	0.6696415494126722	77.55358514277735	230	0.9260869565217391	86.72114402451481	21	1	76.88099520383693	209	0.9186602870813397	87.07533234859675	19	1	methylated (>=50%)	Q9HBY0	NADPH oxidase 3 (EC 1.6.3.-) (Mitogenic oxidase 2) (MOX-2) (gp91phox homolog 3) (GP91-3)	defense response [GO:0006952]; superoxide anion generation [GO:0042554]	hit with GO BP
GN014827	Chromosome_6A	444	1	11	39.63963963963964	0.7075184702303347	3.5460992907801416	11	0	3.5460992907801416	11	0	NA	NA	NA	41.65535956580732	25	0.36	unmethylated (<10%)	Q8QZX5	U7 snRNA-associated Sm-like protein LSm10	mRNA 3'-end processing by stem-loop binding and cleavage [GO:0006398]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN014828	Chromosome_6A	9002	13	85	33.37036214174628	0.3394752125019798	79.80132450331126	82	0.8902439024390244	84.69194312796209	37	0.9459459459459459	76.69873722188815	45	0.8444444444444444	34.0311004784689	27	0.2962962962962963	methylated (>=50%)	A6QQ68	Protein FAM228B	NA	hit, no GO BP
GN014829	Chromosome_6A	1530	1	57	46.33986928104575	0.6952882085625448	0.6463527239150508	51	0	0.6463527239150508	51	0	NA	NA	NA	0.6372809346787042	65	0	unmethylated (<10%)	Q9ULV1	Frizzled-4 (Fz-4) (hFz4) (FzE4) (CD antigen CD344)	canonical Wnt signaling pathway [GO:0060070]; cellular response to retinoic acid [GO:0071300]; cerebellum vasculature morphogenesis [GO:0061301]; extracellular matrix-cell signaling [GO:0035426]; negative regulation of cell-substrate adhesion [GO:0010812]; neuron differentiation [GO:0030182]; non-canonical Wnt signaling pathway [GO:0035567]; Norrin signaling pathway [GO:0110135]; positive regulation of cell migration [GO:0030335]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of neuron projection arborization [GO:0150012]; positive regulation of transcription by RNA polymerase II [GO:0045944]; retina vasculature morphogenesis in camera-type eye [GO:0061299]; retinal blood vessel morphogenesis [GO:0061304]; Wnt signaling pathway [GO:0016055]; Wnt signaling pathway, calcium modulating pathway [GO:0007223]	hit with GO BP
GN014830	Chromosome_6A	1276	2	51	38.322884012539184	1.113399945250479	0.5972696245733788	31	0	0.5985037406483791	25	0	0.5945945945945946	6	0	0.8751902587519026	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014831	Chromosome_6A	675	2	17	41.48148148148148	0.5865364956041709	0.6744604316546763	16	0	0.5660377358490566	13	0	0.9463722397476341	3	0	0.45852438516048355	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014832	Chromosome_6A	667	2	15	40.17991004497751	0.5576923076923077	0.4878048780487805	15	0	0.5597014925373134	13	0	0	2	0	0.6009013520280421	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014833	Chromosome_6A	4517	3	105	36.152313482399826	0.7117484985728564	92.73927392739274	104	1	92.70886075949367	31	1	92.75	73	1	86.54303376129339	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014834	Chromosome_6A	4809	3	123	35.12164691203993	0.8323698689894882	0.5681818181818182	123	0	0.44682752457551383	37	0	0.6208769887466046	86	0	1.0831381733021077	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014835	Chromosome_6A	600	1	21	36	1.1076923076923078	0.4931506849315068	21	0	0.4931506849315068	21	0	NA	NA	NA	0.5378973105134475	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014836	Chromosome_6A	1414	3	43	37.41159830268741	0.8859649122807017	0.39592760180995473	43	0	0.20263424518743667	29	0	0.6402048655569782	14	0	0.5739365293720459	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013246	Chromosome_6A	408	1	19	40.931372549019606	1.1373239436619718	NA	0	NA	NA	NA	NA	NA	NA	NA	89.31433659839715	35	0.9428571428571428	NA	NA	NA	NA	no Swiss-Prot hit
GN014837	Chromosome_6A	5848	11	196	36.96990424076608	0.9809393399972614	0.5944748805222054	196	0	0.6840305182846619	101	0	0.5232314776056928	95	0	0.38488453463960814	34	0	unmethylated (<10%)	Q9W0K0	JNK-interacting protein 1 (JIP-1) (APP-like-interacting protein 1) (APLIP1) (Protein eye developmental SP512)	anterograde synaptic vesicle transport [GO:0048490]; axonal transport of mitochondrion [GO:0019896]; JNK cascade [GO:0007254]; regulation of JNK cascade [GO:0046328]; regulation of terminal button organization [GO:2000331]; retrograde synaptic vesicle transport [GO:0048491]	hit with GO BP
GN014838	Chromosome_6A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN014839	Chromosome_6A	2250	4	59	47.91111111111111	0.4569439998347773	0.16181229773462782	23	0	0.22271714922049	19	0	0	4	0	3.972457627118644	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014840	Chromosome_6A	563	2	7	37.12255772646537	0.37011645379413977	0	1	0	NA	NA	NA	0	1	0	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014841	Chromosome_6A	1179	2	8	32.739609838846484	0.25596352682569407	1.5294117647058822	8	0	1.405152224824356	5	0	1.6548463356973995	3	0	1.5037593984962405	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014842	Chromosome_6A	498	1	16	44.377510040160644	0.673541842772612	0.6818181818181818	16	0	0.6818181818181818	16	0	NA	NA	NA	0.31071983428275507	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014843	Chromosome_6A	3444	6	26	32.897793263646925	0.27946169979027263	62.56410256410256	22	0.8636363636363636	60.56701030927835	16	0.8125	66.49746192893402	6	1	65.34216335540839	6	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014844	Chromosome_6A	693	1	19	43.57864357864358	0.5924409448818898	0.4416961130742049	19	0	0.4416961130742049	19	0	NA	NA	NA	0.8838383838383839	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014845	Chromosome_6A	387	1	6	37.98449612403101	0.44722650231124805	0.3194888178913738	6	0	0.3194888178913738	6	0	NA	NA	NA	0.6084070796460177	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014846	Chromosome_6A	15924	5	216	36.78723938708867	0.4013598877456658	83.59151882302034	200	0.92	60.9	21	0.5238095238095238	85.7413548081478	179	0.9664804469273743	5.097087378640777	23	0.043478260869565216	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014847	Chromosome_6A	363	1	11	42.14876033057851	0.6823308270676691	0.5504587155963303	11	0	0.5504587155963303	11	0	NA	NA	NA	0.5124701059104886	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014848	Chromosome_6A	380	3	10	41.31578947368421	0.6529209621993127	0.6342494714587738	10	0	0.6342494714587738	10	0	NA	NA	NA	1.423290203327172	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014849	Chromosome_6A	387	1	6	43.41085271317829	0.3338125359401955	0	2	0	0	2	0	NA	NA	NA	0.5893186003683242	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014850	Chromosome_6A	10971	8	326	36.377723088141465	0.8982685352622062	0.476448294531673	326	0	0.3464203233256351	73	0	0.5162659123055162	253	0	0.3675389591296677	28	0	unmethylated (<10%)	Q9JHI3	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter moatp1) (Organic anion transporting polypeptide 2B1) (OATP2B1) (Solute carrier family 21 member 9)	cell population proliferation [GO:0008283]; cellular response to iron ion starvation [GO:0010106]; heme import into cell [GO:0140420]; intercellular transport [GO:0010496]; intracellular iron ion homeostasis [GO:0006879]; liver development [GO:0001889]; sodium-independent organic anion transport [GO:0043252]; transmembrane transport [GO:0055085]; xenobiotic transport [GO:0042908]	hit with GO BP
GN014851	Chromosome_6A	12456	10	344	34.71419396274888	0.9169103100581941	0.7059228650137741	344	0	0.4970487729108419	74	0	0.753255895811334	270	0	0.5422647527910686	61	0	unmethylated (<10%)	Q9JHI3	Solute carrier organic anion transporter family member 2B1 (Organic anion transporter moatp1) (Organic anion transporting polypeptide 2B1) (OATP2B1) (Solute carrier family 21 member 9)	cell population proliferation [GO:0008283]; cellular response to iron ion starvation [GO:0010106]; heme import into cell [GO:0140420]; intercellular transport [GO:0010496]; intracellular iron ion homeostasis [GO:0006879]; liver development [GO:0001889]; sodium-independent organic anion transport [GO:0043252]; transmembrane transport [GO:0055085]; xenobiotic transport [GO:0042908]	hit with GO BP
GN014852	Chromosome_6A	7079	5	98	33.479304986580026	0.4949922263027097	2.9980178394449952	84	0	1.7045454545454546	28	0	3.4563758389261743	56	0	2.5992990654205608	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014853	Chromosome_6A	9081	8	186	34.621737694086555	0.6877842241738767	0.8729480975424614	186	0	1.284796573875803	40	0	0.7842232729788952	146	0	0.8880118401578688	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014854	Chromosome_6A	543	1	28	41.25230202578269	1.2136015325670497	0.47619047619047616	28	0	0.47619047619047616	28	0	NA	NA	NA	0.530705079605762	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014855	Chromosome_6A	1524	2	34	37.53280839895013	0.6335481188942008	0.612369871402327	34	0	0.5996002664890073	32	0	0.7575757575757576	2	0	0.7886953664147223	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014856	Chromosome_6A	399	1	21	43.1077694235589	1.1976843910806174	0.5215123859191656	21	0	0.5215123859191656	21	0	NA	NA	NA	0.5076142131979695	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016635	Chromosome_6A	2845	3	25	35.07908611599297	0.28567010474905213	25.48076923076923	3	0	NA	NA	NA	25.48076923076923	3	0	35.13513513513514	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014857	Chromosome_6A	1010	2	30	38.31683168316832	0.8108108108108109	0.546875	30	0	0.6200177147918512	27	0	0	3	0	0.491307634164777	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014858	Chromosome_6A	612	1	12	43.95424836601307	0.4075924075924076	4.477611940298507	5	0	4.477611940298507	5	0	NA	NA	NA	2.4	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014859	Chromosome_6A	19518	16	288	34.91648734501486	0.4846899551661378	85.77429291514981	280	0.9857142857142858	89.04555314533623	59	1	85.17463052554841	221	0.9819004524886877	0.422237860661506	40	0	methylated (>=50%)	Q75J93	Circularly permutated Ras protein 1 (DdiCPRas1)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN014860	Chromosome_6A	9160	7	285	37.84934497816594	0.8728242917037226	0.9678838539375275	234	0	0.7710557532621589	33	0	1.002169645624548	201	0	1.1665888940737283	59	0	unmethylated (<10%)	Q5FVR2	Thymidine phosphorylase (TP) (EC 2.4.2.4) (TdRPase)	dTMP catabolic process [GO:0046074]; pyrimidine nucleobase metabolic process [GO:0006206]; pyrimidine nucleoside metabolic process [GO:0006213]	hit with GO BP
GN014861	Chromosome_6A	438	1	26	50	0.9507430288862916	0.9052504526252263	26	0	0.9052504526252263	26	0	NA	NA	NA	0.7539203860072377	59	0	unmethylated (<10%)	Q7Q5J5	Pfs47 receptor (AgP47Rec) (P47Rec)	NA	hit, no GO BP
GN014862	Chromosome_6A	4403	6	127	35.839200545082896	0.9010546500479386	0.5139345130867861	117	0	0.8312551953449709	22	0	0.46757347583191644	95	0	0.4576659038901602	45	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN014863	Chromosome_6A	240	1	12	48.75	0.8643457382953181	0.7202881152460985	12	0	0.7202881152460985	12	0	NA	NA	NA	0.7134156951452932	17	0	unmethylated (<10%)	Q99N42	Thymidine phosphorylase (TP) (EC 2.4.2.4) (TdRPase)	animal organ morphogenesis [GO:0009887]; chemotaxis [GO:0006935]; dTMP catabolic process [GO:0046074]; pyrimidine nucleobase metabolic process [GO:0006206]; pyrimidine nucleoside metabolic process [GO:0006213]; regulation of gastric motility [GO:1905333]; regulation of myelination [GO:0031641]; regulation of transmission of nerve impulse [GO:0051969]	hit with GO BP
GN014864	Chromosome_6A	168	1	13	56.54761904761905	0.9706666666666667	1.6129032258064515	13	0	1.6129032258064515	13	0	NA	NA	NA	0.9031610637230306	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014865	Chromosome_6A	456	1	40	53.28947368421053	1.31298589116038	0.9190120620333142	30	0	0.9190120620333142	30	0	NA	NA	NA	0.4768892149669846	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014866	Chromosome_6A	510	1	17	40.3921568627451	0.8266590389016019	0.2364066193853428	12	0	0.2364066193853428	12	0	NA	NA	NA	0.6610331198037345	74	0	unmethylated (<10%)	P26356	TATA-box-binding protein 1 (TATA sequence-binding protein 1) (TBP-1) (TATA-binding factor 1) (TATA-box factor 1) (Transcription initiation factor TFIID TBP-1 subunit)	DNA-templated transcription initiation [GO:0006352]	hit with GO BP
GN014867	Chromosome_6A	351	1	20	45.2991452991453	1.1235595390524968	0.42538107054236085	12	0	0.42538107054236085	12	0	NA	NA	NA	0.5128205128205128	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014868	Chromosome_6A	540	1	18	42.77777777777778	0.7289635518224089	1.0902747492368077	15	0	1.0902747492368077	15	0	NA	NA	NA	0.48189252336448596	30	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN014869	Chromosome_6A	4437	6	132	35.72233491097588	0.933828242339593	0.7046116197628792	121	0	0.8224617129892229	23	0	0.6840148698884758	98	0	0.6595744680851063	55	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN014870	Chromosome_6A	3635	4	116	35.763411279229715	0.9982032058217079	0.7704819792825957	114	0	1.0179640718562875	23	0	0.7291978823294376	91	0	0.4778453518679409	41	0	unmethylated (<10%)	P83298	Fibrinolytic enzyme, isozyme C (F-II) (EC 3.4.21.-)	proteolysis [GO:0006508]	hit with GO BP
GN014871	Chromosome_6A	6489	4	210	36.90861457851749	0.9504071708946042	2.399504161501682	209	0	0.3409090909090909	16	0	2.5734588054541963	193	0	0.885478158205431	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014872	Chromosome_6A	210	1	8	44.285714285714285	0.7879924953095685	0.411522633744856	8	0	0.411522633744856	8	0	NA	NA	NA	0.7348784624081401	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014873	Chromosome_6A	1642	2	44	32.33861144945189	1.024968789013733	0.3992015968063872	44	0	0.36900369003690037	7	0	0.40584415584415584	37	0	0.6216696269982238	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014874	Chromosome_6A	8956	4	250	34.53550692273336	0.9366351080456077	0.6178236288395407	250	0	0.390625	22	0	0.6284703154554885	228	0	0.31019775106630476	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014875	Chromosome_6A	8303	6	226	35.46910755148741	0.8657561625582945	0.7829393781224369	226	0	0.6338028169014085	23	0	0.8006004503377533	203	0	0.5804028678729942	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014876	Chromosome_6A	662	2	19	43.051359516616316	0.6579828415986608	0.5050505050505051	19	0	0.5050505050505051	19	0	NA	NA	NA	0.4206098843322818	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014877	Chromosome_6A	8598	2	243	33.85671086299139	0.9864095179642132	1.0768709786657635	233	0	0.5977796754910333	59	0	1.1671898897206794	174	0	0.7224334600760456	58	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN014878	Chromosome_6A	15492	14	250	36.42525174283501	0.48935980416510516	83.04983388704319	249	0.9558232931726908	83.73860182370821	40	1	82.94585500152952	209	0.9473684210526315	43.473005640612406	46	0.41304347826086957	methylated (>=50%)	O75027	Iron-sulfur clusters transporter ABCB7, mitochondrial (ATP-binding cassette sub-family B member 7, mitochondrial) (ATP-binding cassette transporter 7) (ABC transporter 7 protein)	heme biosynthetic process [GO:0006783]; intracellular iron ion homeostasis [GO:0006879]; iron ion transmembrane transport [GO:0034755]; iron-sulfur cluster assembly [GO:0016226]; iron-sulfur cluster export from the mitochondrion [GO:0140466]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; positive regulation of heme biosynthetic process [GO:0070455]; positive regulation of iron-sulfur cluster assembly [GO:1903331]	hit with GO BP
GN014879	Chromosome_6A	14285	7	131	35.73678683934197	0.2876432386734811	79.4839835473015	128	0.875	77.5808936825886	22	0.7727272727272727	79.85130111524164	106	0.8962264150943396	68.41121495327103	40	0.6	methylated (>=50%)	Q6NYU7	Uracil phosphoribosyltransferase homolog	NA	hit, no GO BP
GN014880	Chromosome_6A	18508	10	208	35.07132051004971	0.3692132520187657	86.65518051531052	208	0.9759615384615384	84.65804066543438	61	0.9344262295081968	87.19197138314786	147	0.9931972789115646	0.3850596842510589	42	0	methylated (>=50%)	Q9QZP2	PR domain zinc finger protein 4 (EC 2.1.1.-) (PR domain-containing protein 4)	cellular response to growth factor stimulus [GO:0071363]; cellular response to nutrient [GO:0031670]; negative regulation of cell growth [GO:0030308]; negative regulation of gene expression [GO:0010629]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of gene expression [GO:0010468]; regulation of neural precursor cell proliferation [GO:2000177]; regulation of stem cell differentiation [GO:2000736]; transcription by RNA polymerase II [GO:0006366]	hit with GO BP
GN014881	Chromosome_6A	964	2	39	39.83402489626556	1.0199674443841562	0.6284367635506677	39	0	0.5741626794258373	36	0	0.8771929824561403	3	0	0.45843520782396086	56	0	unmethylated (<10%)	O61366	Serine-enriched protein	NA	hit, no GO BP
GN014882	Chromosome_6A	6163	7	206	39.78581859484017	0.8458439931776996	3.561683182536263	204	0	2.888368462138954	140	0	4.391025641025641	64	0	0.5646359583952452	57	0	unmethylated (<10%)	Q8C419	Metabotropic glycine receptor (mGlyR) (G protein-coupled receptor 158)	brain development [GO:0007420]; cognition [GO:0050890]; G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of G protein-coupled receptor signaling pathway [GO:0045744]; positive regulation of neurotransmitter secretion [GO:0001956]; protein localization to plasma membrane [GO:0072659]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN002503	Chromosome_6A	728	2	32	39.285714285714285	1.1596973317403425	0.5454545454545454	32	0	0.6479481641468683	15	0	0.4143646408839779	17	0	0.710594315245478	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014883	Chromosome_6A	1035	1	54	45.507246376811594	1.0133444537114262	0.6182380216383307	52	0	0.6182380216383307	52	0	NA	NA	NA	1.182225845902976	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014884	Chromosome_6A	306	1	25	50.326797385620914	1.341164095371669	0.3367003367003367	25	0	0.3367003367003367	25	0	NA	NA	NA	0.5524861878453039	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014885	Chromosome_6A	563	2	11	45.11545293072824	0.40665834920218	NA	0	NA	NA	NA	NA	NA	NA	NA	6.534422403733956	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014886	Chromosome_6A	297	1	9	45.79124579124579	0.5861842105263158	0.546448087431694	9	0	0.546448087431694	9	0	NA	NA	NA	17.106652587117214	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014887	Chromosome_6A	585	1	25	42.39316239316239	0.9512195121951219	0.27100271002710025	24	0	0.27100271002710025	24	0	NA	NA	NA	14.4	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014888	Chromosome_6A	798	1	41	48.1203007518797	0.8982785602503912	0.546448087431694	38	0	0.546448087431694	38	0	NA	NA	NA	0.5875706214689266	58	0	unmethylated (<10%)	Q90XB3	Oligodendrocyte transcription factor 2 (Oligo2)	axon development [GO:0061564]; myelination [GO:0042552]; oligodendrocyte cell fate specification [GO:0021778]; positive regulation of transcription by RNA polymerase II [GO:0045944]; sensory organ development [GO:0007423]	hit with GO BP
GN020177	Chromosome_6A	3538	4	29	31.091011871113622	0.3395438419993646	18.557740796772567	25	0.12	9.58904109589041	13	0	23.001508295625943	12	0.25	1.6927899686520376	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014889	Chromosome_6A	6831	5	130	38.823012736056214	0.5052667154847068	83.2	126	0.8968253968253969	83.67117117117117	62	0.9193548387096774	83.00758795125316	64	0.875	2.2969647251845777	39	0.02564102564102564	methylated (>=50%)	Q60769	Tumor necrosis factor alpha-induced protein 3 (TNF alpha-induced protein 3) (EC 2.3.2.-) (EC 3.4.19.12) (Putative DNA-binding protein A20) (Zinc finger protein A20)	B-1 B cell homeostasis [GO:0001922]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to lipopolysaccharide [GO:0071222]; establishment of protein localization to vacuole [GO:0072666]; marginal zone B cell differentiation [GO:0002315]; negative regulation of autophagy [GO:0010507]; negative regulation of B cell activation [GO:0050869]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of CD40 signaling pathway [GO:2000349]; negative regulation of chronic inflammatory response [GO:0002677]; negative regulation of endothelial cell apoptotic process [GO:2000352]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902042]; negative regulation of granuloma formation [GO:0002632]; negative regulation of heterotypic cell-cell adhesion [GO:0034115]; negative regulation of inflammatory response [GO:0050728]; negative regulation of innate immune response [GO:0045824]; negative regulation of interleukin-1 beta production [GO:0032691]; negative regulation of interleukin-2 production [GO:0032703]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway [GO:0070429]; negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway [GO:0070433]; negative regulation of protein ubiquitination [GO:0031397]; negative regulation of smooth muscle cell proliferation [GO:0048662]; negative regulation of toll-like receptor 3 signaling pathway [GO:0034140]; negative regulation of toll-like receptor 5 signaling pathway [GO:0034148]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of hepatocyte proliferation [GO:2000347]; positive regulation of protein catabolic process [GO:0045732]; protein deubiquitination [GO:0016579]; protein deubiquitination involved in ubiquitin-dependent protein catabolic process [GO:0071947]; protein K11-linked deubiquitination [GO:0035871]; protein K48-linked deubiquitination [GO:0071108]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked deubiquitination [GO:0070536]; regulation of germinal center formation [GO:0002634]; regulation of immunoglobulin production [GO:0002637]; regulation of innate immune response [GO:0045088]; response to molecule of bacterial origin [GO:0002237]; response to muramyl dipeptide [GO:0032495]; response to wounding [GO:0009611]; tolerance induction to lipopolysaccharide [GO:0072573]	hit with GO BP
GN014890	Chromosome_6A	2874	5	86	36.39526791927627	0.9037306256467259	1.0787992495309568	85	0	0.6663249615581753	44	0	1.4267185473411155	41	0	3.3962264150943398	72	0	unmethylated (<10%)	P70665	Sialate O-acetylesterase (SIAE) (EC 3.1.1.53) (Sialic acid-specific 9-O-acetylesterase) (Yolk sac protein 2) [Cleaved into: Sialate O-acetylesterase small subunit; Sialate O-acetylesterase large subunit]	carbohydrate metabolic process [GO:0005975]; regulation of immune system process [GO:0002682]	hit with GO BP
GN014891	Chromosome_6A	20351	11	409	36.3225394329517	0.6141862099626075	56.766987568931675	409	0.5158924205378973	46.96150174992046	70	0.44285714285714284	58.455217748562035	339	0.5309734513274337	0.5860415556739478	53	0	methylated (>=50%)	E2QUD0	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial (Glu-AdT subunit A) (EC 3.5.1.2) (Glutaminyl-tRNA synthase-like protein 1)	glutaminyl-tRNAGln biosynthesis via transamidation [GO:0070681]; mitochondrial translation [GO:0032543]	hit with GO BP
GN014892	Chromosome_6A	10350	9	151	36.04830917874396	0.44967190653292416	61.84260549993664	147	0.6326530612244898	71.50537634408602	19	0.6842105263157895	60.25092250922509	128	0.625	0.7534048101999421	55	0	methylated (>=50%)	Q29593	Transaldolase (EC 2.2.1.2)	carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]	hit with GO BP
GN014893	Chromosome_6A	351	1	10	43.58974358974359	0.6112852664576802	0.7936507936507936	10	0	0.7936507936507936	10	0	NA	NA	NA	0.1606425702811245	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014894	Chromosome_6A	468	1	14	40.598290598290596	0.7299465240641712	0.4807692307692308	14	0	0.4807692307692308	14	0	NA	NA	NA	0.6698920729438035	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014895	Chromosome_6A	474	1	17	40.71729957805907	0.8852999340804218	0.423728813559322	17	0	0.423728813559322	17	0	NA	NA	NA	0.5428226779252111	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014896	Chromosome_6A	1405	3	39	38.718861209964416	0.7428923927927439	1	39	0	1.183431952662722	28	0	0.573394495412844	11	0	0.3560126582278481	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014897	Chromosome_6A	366	1	13	44.26229508196721	0.7586096938775511	1.4157014157014156	13	0	1.4157014157014156	13	0	NA	NA	NA	0.2827521206409048	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014898	Chromosome_6A	174	1	2	44.252873563218394	0.28760330578512394	0.6622516556291391	2	0	0.6622516556291391	2	0	NA	NA	NA	0.730816077953715	69	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014899	Chromosome_6A	3200	2	100	36.9375	0.9162333646379733	18.091222690686088	100	0.18	11.490683229813664	5	0.2	18.52532679738562	95	0.17894736842105263	85.21183053557154	27	0.8518518518518519	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014900	Chromosome_6A	459	1	30	54.248366013071895	0.8887311217245385	1.6611295681063123	23	0	1.6611295681063123	23	0	NA	NA	NA	3.7697052775873887	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014901	Chromosome_6A	14563	7	218	35.658861498317656	0.47311314864031534	84.84895072642017	199	0.9547738693467337	87.67676767676768	21	1	84.61602462767286	178	0.949438202247191	69.26298157453937	20	0.8	methylated (>=50%)	Q2TBK2	Large ribosomal subunit protein bL9m (39S ribosomal protein L9, mitochondrial) (L9mt) (MRP-L9)	translation [GO:0006412]	hit with GO BP
GN014902	Chromosome_6A	742	3	31	44.74393530997305	0.8425641025641025	1.1450381679389312	31	0	1.3100436681222707	27	0	0	4	0	5.685483870967742	46	0	unmethylated (<10%)	Q2TBH0	Ciliary microtubule associated protein 1A (Outer dense fiber of sperm tails protein 3) (Outer dense fiber protein 3)	NA	hit, no GO BP
GN014903	Chromosome_6A	1445	2	24	37.2318339100346	0.48021933893681545	0	1	0	0	1	0	NA	NA	NA	0.5718954248366013	74	0	NA	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN014904	Chromosome_6A	5306	4	92	38.72973991707501	0.4634914727033458	87.0329181494662	89	0.8764044943820225	70.00849617672047	35	0.7142857142857143	93.07020186803254	54	0.9814814814814815	45.90655807972568	46	0.3695652173913043	methylated (>=50%)	Q6ZV70	LanC-like protein 3	carbohydrate metabolic process [GO:0005975]; peptide modification [GO:0031179]	hit with GO BP
GN014905	Chromosome_6A	2095	2	25	38.32935560859188	0.32601929660753193	87.67029972752043	24	0.9583333333333334	95.4724409448819	10	1	83.54166666666667	14	0.9285714285714286	90.4566022213081	44	1	methylated (>=50%)	Q58EL2	Novel acetylcholine receptor chaperone (Transmembrane protein 35A)	chaperone-mediated protein complex assembly [GO:0051131]; positive regulation of protein localization to cell surface [GO:2000010]	hit with GO BP
GN014906	Chromosome_6A	18446	13	358	35.904803209367884	0.6072941496718754	79.98065764023211	346	0.9046242774566474	80.84319526627219	58	0.9310344827586207	79.85796948974225	288	0.8993055555555556	54.32220039292731	43	0.6744186046511628	methylated (>=50%)	Q569B9	Protein MFI (Mitochondrial fission factor interactor) (Protein C11orf65 homolog)	negative regulation of mitochondrial fission [GO:0090258]; negative regulation of protein localization to mitochondrion [GO:1903748]	hit with GO BP
GN014907	Chromosome_6A	24208	17	426	36.145076007931266	0.5400253711080942	90.23731863682376	396	0.9545454545454546	87.71543821048772	105	0.8857142857142857	90.88552712191904	291	0.979381443298969	1.265322261763543	57	0	methylated (>=50%)	O60293	Zinc finger C3H1 domain-containing protein (Coiled-coil domain-containing protein 131) (Proline/serine-rich coiled-coil protein 2)	RNA catabolic process [GO:0006401]; RNA processing [GO:0006396]	hit with GO BP
GN014908	Chromosome_6A	2854	2	99	40.469516468114925	0.8480688189600317	5.162488393686165	98	0	0.44529262086513993	19	0	7.107264621033307	79	0	2.7624309392265194	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014909	Chromosome_6A	44907	33	516	35.54679671320729	0.36626653454186264	85.4328650767723	508	0.9606299212598425	88.74379253264668	114	0.9824561403508771	84.71775314821436	394	0.9543147208121827	43.52617079889807	25	0.32	methylated (>=50%)	O60287	Nucleolar pre-ribosomal-associated protein 1 (Nucleolar protein 254 kDa) (URB1 ribosome biogenesis 1 homolog)	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000466]; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	hit with GO BP
GN014910	Chromosome_6A	1590	1	46	41.9496855345912	0.666023166023166	92.92682926829268	46	1	92.92682926829268	46	1	NA	NA	NA	76.98209718670077	17	0.9411764705882353	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014911	Chromosome_6A	4059	4	42	33.50578960335058	0.37052702044790653	85.56841388699796	42	1	83.68580060422961	6	1	85.80744150364403	36	1	88.52611940298507	40	0.975	methylated (>=50%)	Q6DF27	Charged multivesicular body protein 1b (Chromatin-modifying protein 1b) (CHMP1b)	late endosome to vacuole transport [GO:0045324]	hit with GO BP
GN014912	Chromosome_6A	810	1	35	50.74074074074074	0.6722151088348272	0.3762227238525207	35	0	0.3762227238525207	35	0	NA	NA	NA	24.154804270462634	40	0.25	unmethylated (<10%)	Q05831	Sperm-specific protein PHI-2B/PHI-3 [Cleaved into: Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific linker histone H1-like protein); Sperm-specific protein PHI-3 (PL-IV) (Protamine-like protein PHI-3)]	nucleosome assembly [GO:0006334]	hit with GO BP
GN014913	Chromosome_6A	29876	20	447	34.43566742535815	0.5063819633211486	81.016295025729	391	0.9130434782608695	78.44474761255115	78	0.8846153846153846	81.6139942923581	313	0.9201277955271565	76.0633484162896	60	0.8166666666666667	methylated (>=50%)	Q3ZBF0	Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) (NAD(+) synthetase)	'de novo' NAD+ biosynthetic process from L-tryptophan [GO:0034354]; NAD+ biosynthetic process [GO:0009435]	hit with GO BP
GN014914	Chromosome_6A	17414	19	302	36.53956586654416	0.5271468666051883	92.8108941418294	295	1	92.90953545232274	84	1	92.78123120112292	211	1	93.10573417301956	43	1	methylated (>=50%)	Q08DA3	Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16)	mitotic nuclear division [GO:0140014]; monoubiquitinated protein deubiquitination [GO:0035520]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of ribosome biogenesis [GO:0090070]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein homotetramerization [GO:0051289]; regulation of cell cycle [GO:0051726]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN014915	Chromosome_6A	9299	2	281	35.08979460157006	0.9816766298794196	5.241692852844822	280	0	1.2372634643377	45	0	5.64676433777516	235	0	0.7639836289222374	54	0	unmethylated (<10%)	Q5M9G6	Smad nuclear interacting protein 1	miRNA processing [GO:0035196]; mRNA splicing, via spliceosome [GO:0000398]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]	hit with GO BP
GN014916	Chromosome_6A	9126	5	350	40.28051720359413	0.945639285730146	0.6285305115761	346	0	0.4965859714463066	91	0	0.6740130523162512	255	0	0.43521928356210243	55	0	unmethylated (<10%)	Q8K1P8	Monocarboxylate transporter 8 (MCT 8) (Solute carrier family 16 member 2)	amino acid import across plasma membrane [GO:0089718]; amino acid metabolic process [GO:0006520]; hormone transport [GO:0009914]; negative regulation of neural precursor cell proliferation [GO:2000178]; thyroid hormone generation [GO:0006590]; thyroid hormone metabolic process [GO:0042403]; thyroid hormone transport [GO:0070327]; thyroid-stimulating hormone secretion [GO:0070460]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN014917	Chromosome_6A	189	1	10	52.38095238095238	0.78099173553719	0	10	0	0	10	0	NA	NA	NA	1.4008620689655173	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014918	Chromosome_6A	690	2	0	53.768115942028984	0	NA	0	NA	NA	NA	NA	NA	NA	NA	11.514522821576763	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014919	Chromosome_6A	1191	1	54	41.813602015113354	1.0379084967320262	0.6949270326615705	54	0	0.6949270326615705	54	0	NA	NA	NA	0.4318008636017272	76	0	unmethylated (<10%)	P26153	Neuronal acetylcholine receptor subunit beta-4 (Neuronal acetylcholine receptor non-alpha-3 chain) (N-alpha 3)	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN014920	Chromosome_6A	213	1	11	46.478873239436616	1.033068783068783	0	11	0	0	11	0	NA	NA	NA	0.4791431792559188	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014921	Chromosome_6A	1212	1	44	41.914191419141915	0.8407775868321062	0.5054151624548736	44	0	0.5054151624548736	44	0	NA	NA	NA	0.5765765765765766	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014922	Chromosome_6A	15240	11	330	35.610236220472444	0.6848652834091072	1.2776831345826236	297	0	1.0466988727858293	49	0	1.3225856941618406	248	0	0.6573757559821194	59	0	unmethylated (<10%)	Q8AVJ1	Proline-rich protein 5 (Protein observed with Rictor-1) (Protor-1)	TORC2 signaling [GO:0038203]	hit with GO BP
GN014923	Chromosome_6A	4786	3	125	37.08733806936899	0.7606155614379035	0.587115201523326	125	0	0.48973880597014924	93	0	0.7944389275074478	32	0	1.1178388448998602	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014924	Chromosome_6A	703	4	13	31.86344238975818	0.7344101575056252	0.21436227224008575	13	0	0.15748031496062992	9	0	0.33557046979865773	4	0	1.0118897040222616	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014925	Chromosome_6A	228	1	3	41.666666666666664	0.3220338983050847	0.35335689045936397	3	0	0.35335689045936397	3	0	NA	NA	NA	1.0586319218241043	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014926	Chromosome_6A	14224	10	348	35.686164229471316	0.7686744275066988	1.134639488092882	293	0	0.6759611322348965	54	0	1.2195121951219512	239	0	0.3767491926803014	41	0	unmethylated (<10%)	P15145	Aminopeptidase N (AP-N) (pAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (gp130) (CD antigen CD13)	angiotensin maturation [GO:0002003]; peptide catabolic process [GO:0043171]	hit with GO BP
GN014927	Chromosome_6A	834	1	23	41.007194244604314	0.6617905813351733	0.3389830508474576	23	0	0.3389830508474576	23	0	NA	NA	NA	0.5860415556739478	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014928	Chromosome_6A	14659	12	488	36.660072310525955	0.9908230754996504	0.8123574372723998	485	0	0.7696007696007696	105	0	0.8208919398972685	380	0	0.6041426927502876	65	0	unmethylated (<10%)	P79171	Aminopeptidase N (AP-N) (fAPN) (EC 3.4.11.2) (Alanyl aminopeptidase) (Aminopeptidase M) (AP-M) (Microsomal aminopeptidase) (CD antigen CD13)	angiotensin maturation [GO:0002003]; peptide catabolic process [GO:0043171]	hit with GO BP
GN014929	Chromosome_6A	38168	34	632	37.35852022636764	0.4752775699665858	85.28688524590164	628	0.9665605095541401	88.53233425639355	120	0.9666666666666667	84.63280916581859	508	0.9665354330708661	77.774755168661585	53	0.7735849056603774	methylated (>=50%)	D3ZGQ5	Serine/threonine-protein kinase Nek8 (EC 2.7.11.1) (Never in mitosis A-related kinase 8) (NimA-related protein kinase 8)	animal organ morphogenesis [GO:0009887]; determination of left/right symmetry [GO:0007368]; heart development [GO:0007507]; regulation of hippo signaling [GO:0035330]	hit with GO BP
GN014930	Chromosome_6A	2368	3	60	39.40033783783784	0.6568958342965463	78.93687707641196	60	0.8166666666666667	73.68845843422115	20	0.75	82.6086956521739	40	0.85	0.5050505050505051	34	0	methylated (>=50%)	Q9D1H6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 (Hormone-regulated proliferation-associated protein of 20 kDa homolog)	defense response to virus [GO:0051607]; mitochondrial respiratory chain complex I assembly [GO:0032981]; NADH dehydrogenase complex assembly [GO:0010257]; negative regulation of apoptotic process [GO:0043066]; positive regulation of cell population proliferation [GO:0008284]	hit with GO BP
GN014931	Chromosome_6A	10145	11	129	34.637752587481515	0.4269634878610963	82.48256624825663	129	0.8992248062015504	90.31106578276389	47	0.9787234042553191	79.53541946630831	82	0.8536585365853658	2.4582967515364356	28	0	methylated (>=50%)	P30051	Transcriptional enhancer factor TEF-1 (NTEF-1) (Protein GT-IIC) (TEA domain family member 1) (TEAD-1) (Transcription factor 13) (TCF-13)	cellular response to retinoic acid [GO:0071300]; embryonic heart tube morphogenesis [GO:0003143]; embryonic organ development [GO:0048568]; heart development [GO:0007507]; hippo signaling [GO:0035329]; lateral mesoderm development [GO:0048368]; notochord development [GO:0030903]; paraxial mesoderm development [GO:0048339]; positive regulation of cell growth [GO:0030307]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of miRNA transcription [GO:1902895]; positive regulation of protein serine/threonine kinase activity [GO:0071902]; positive regulation of stem cell population maintenance [GO:1902459]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein-containing complex assembly [GO:0065003]; regulation of cell population proliferation [GO:0042127]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; transition between fast and slow fiber [GO:0014883]	hit with GO BP
GN014932	Chromosome_6A	967	2	12	38.986556359875905	0.3277966101694915	29.766536964980546	12	0.3333333333333333	28.03347280334728	7	0.42857142857142855	31.272727272727273	5	0.2	12.151616499442586	27	0.037037037037037035	sparse (10-50%)	Q9GMC9	Translocator protein (Peripheral-type benzodiazepine receptor) (PBR)	NA	hit, no GO BP
GN014933	Chromosome_6A	1486	4	31	39.36742934051144	0.5386954182940805	4.8092868988391375	31	0	5.5080721747388415	26	0	0	5	0	1.4729950900163666	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014934	Chromosome_6A	1713	2	54	43.957968476357266	0.6548999617688288	0.8260196179659267	54	0	0.8771929824561403	44	0	0.5865102639296188	10	0	0.5279577633789296	52	0	unmethylated (<10%)	Q9NQ86	E3 ubiquitin-protein ligase TRIM36 (EC 2.3.2.27) (RING finger protein 98) (RING-type E3 ubiquitin transferase TRIM36) (Tripartite motif-containing protein 36) (Zinc-binding protein Rbcc728)	acrosome reaction [GO:0007340]; mitotic cytokinesis [GO:0000281]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]; regulation of microtubule cytoskeleton organization [GO:0070507]; spindle organization [GO:0007051]	hit with GO BP
GN014935	Chromosome_6A	1474	2	39	40.16282225237449	0.6604549632352941	0.47761194029850745	39	0	0.445859872611465	36	0	0.9523809523809523	3	0	1.2742099898063202	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014936	Chromosome_6A	15240	10	212	50.09842519685039	0.22728500614557587	5.918448139350752	135	0.02962962962962963	0	1	0	5.93018643395478	134	0.029850746268656716	0.8085106382978723	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014937	Chromosome_6A	18894	6	396	38.81655552027099	0.5571569982514619	63.147276395427035	284	0.6619718309859155	78.09330628803245	8	1	62.6828038325769	276	0.6521739130434783	21.751574127074985	39	0.46153846153846156	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016300	Chromosome_6A	618	1	10	44.1747572815534	0.3418141592920354	33.480176211453745	10	0	33.480176211453745	10	0	NA	NA	NA	45.21739130434783	13	0.5384615384615384	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014938	Chromosome_6A	30289	12	796	36.56773085938789	0.7862409711672493	1.5162253834860528	781	0	0.5568445475638051	80	0	1.6337083759518127	701	0	0.589066918001885	61	0	unmethylated (<10%)	Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (EC 3.6.5.-) (Dardarin)	calcium-mediated signaling [GO:0019722]; canonical Wnt signaling pathway [GO:0060070]; cellular response to curcumin [GO:1904644]; cellular response to dopamine [GO:1903351]; cellular response to manganese ion [GO:0071287]; cellular response to oxidative stress [GO:0034599]; cellular response to reactive oxygen species [GO:0034614]; cellular response to starvation [GO:0009267]; determination of adult lifespan [GO:0008340]; endocytosis [GO:0006897]; endoplasmic reticulum organization [GO:0007029]; excitatory postsynaptic potential [GO:0060079]; exploration behavior [GO:0035640]; Golgi organization [GO:0007030]; GTP metabolic process [GO:0046039]; intracellular distribution of mitochondria [GO:0048312]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; JNK cascade [GO:0007254]; locomotory exploration behavior [GO:0035641]; lysosome organization [GO:0007040]; MAPK cascade [GO:0000165]; mitochondrion localization [GO:0051646]; mitochondrion organization [GO:0007005]; negative regulation of autophagosome assembly [GO:1902902]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of excitatory postsynaptic potential [GO:0090394]; negative regulation of GTPase activity [GO:0034260]; negative regulation of late endosome to lysosome transport [GO:1902823]; negative regulation of macroautophagy [GO:0016242]; negative regulation of motile cilium assembly [GO:1905504]; negative regulation of neuron projection development [GO:0010977]; negative regulation of protein localization to mitochondrion [GO:1903748]; negative regulation of protein processing [GO:0010955]; neuromuscular junction development [GO:0007528]; neuron projection arborization [GO:0140058]; neuron projection morphogenesis [GO:0048812]; olfactory bulb development [GO:0021772]; positive regulation of autophagy [GO:0010508]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dopamine receptor signaling pathway [GO:0060161]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of microglial cell activation [GO:1903980]; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901030]; positive regulation of programmed cell death [GO:0043068]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein autoubiquitination [GO:1902499]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of synaptic vesicle endocytosis [GO:1900244]; positive regulation of tumor necrosis factor production [GO:0032760]; protein autophosphorylation [GO:0046777]; protein localization to endoplasmic reticulum exit site [GO:0070973]; protein localization to mitochondrion [GO:0070585]; protein phosphorylation [GO:0006468]; regulation of autophagy [GO:0010506]; regulation of branching morphogenesis of a nerve [GO:2000172]; regulation of CAMKK-AMPK signaling cascade [GO:1905289]; regulation of cAMP/PKA signal transduction [GO:0141161]; regulation of canonical Wnt signaling pathway [GO:0060828]; regulation of cell projection organization [GO:0031344]; regulation of dendritic spine morphogenesis [GO:0061001]; regulation of dopamine receptor signaling pathway [GO:0060159]; regulation of ER to Golgi vesicle-mediated transport [GO:0060628]; regulation of kidney size [GO:0035564]; regulation of locomotion [GO:0040012]; regulation of membrane potential [GO:0042391]; regulation of mitochondrial depolarization [GO:0051900]; regulation of mitochondrial fission [GO:0090140]; regulation of neuroblast proliferation [GO:1902692]; regulation of neuron maturation [GO:0014041]; regulation of protein stability [GO:0031647]; regulation of reactive oxygen species metabolic process [GO:2000377]; regulation of retrograde transport, endosome to Golgi [GO:1905279]; regulation of SNARE complex assembly [GO:0035542]; regulation of synaptic transmission, glutamatergic [GO:0051966]; regulation of synaptic vesicle endocytosis [GO:1900242]; regulation of synaptic vesicle exocytosis [GO:2000300]; regulation of synaptic vesicle transport [GO:1902803]; response to oxidative stress [GO:0006979]; Rho protein signal transduction [GO:0007266]; spermatogenesis [GO:0007283]; striatum development [GO:0021756]; tangential migration from the subventricular zone to the olfactory bulb [GO:0022028]; Wnt signalosome assembly [GO:1904887]	hit with GO BP
GN014939	Chromosome_6A	5164	4	92	37.06429124709528	0.542431400846493	89.3794924453572	92	1	93.6265709156194	26	1	88.54988602489918	66	1	93.00031816735603	36	0.9722222222222222	methylated (>=50%)	Q8N5D0	WD and tetratricopeptide repeats protein 1	negative regulation of adipose tissue development [GO:1904178]; protein ubiquitination [GO:0016567]	hit with GO BP
GN014940	Chromosome_6A	11127	10	139	34.591534106228096	0.4204124935374599	85.62795297220086	139	0.920863309352518	93.234100135318	46	0.9782608695652174	83.17838466008135	93	0.8924731182795699	1.1163895486935866	63	0	methylated (>=50%)	Q8N5D0	WD and tetratricopeptide repeats protein 1	negative regulation of adipose tissue development [GO:1904178]; protein ubiquitination [GO:0016567]	hit with GO BP
GN014941	Chromosome_6A	8442	9	96	34.89694385216773	0.375971437690669	90.75453367875647	96	0.9895833333333334	93.42105263157895	24	1	89.99584026622296	72	0.9861111111111112	86.3385971355123	44	1	methylated (>=50%)	Q08DK4	Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+) symporter 1) (Solute carrier family 25 member 22)	aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]; regulation of insulin secretion [GO:0050796]	hit with GO BP
GN014942	Chromosome_6A	8391	8	138	37.123108092003335	0.48675499194176886	77.89807524059492	126	0.8968253968253969	60.38374717832957	19	0.7368421052631579	79.77718575926374	107	0.9252336448598131	31.517715494447383	28	0.35714285714285715	methylated (>=50%)	Q32LJ6	Rab-like protein 3 (EC 3.6.5.2)	B cell differentiation [GO:0030183]; natural killer cell differentiation [GO:0001779]; positive regulation of cilium assembly [GO:0045724]; protein stabilization [GO:0050821]; regulation of protein lipidation [GO:1903059]; regulation of Ras protein signal transduction [GO:0046578]; T cell differentiation in thymus [GO:0033077]	hit with GO BP
GN014943	Chromosome_6A	40134	32	664	37.11566253052275	0.48523998032890814	83.38192419825073	658	0.9437689969604863	88.31321260898726	166	0.9759036144578314	82.38038481185085	492	0.9329268292682927	7.852564102564102	29	0.13793103448275862	methylated (>=50%)	Q5TH69	Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (ARFGEF family member 3)	regulation of ARF protein signal transduction [GO:0032012]	hit with GO BP
GN014944	Chromosome_6A	978	1	30	39.16155419222904	0.8034834045349983	0.818926296633303	30	0	0.818926296633303	30	0	NA	NA	NA	0.7971303308090872	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014945	Chromosome_6A	1587	1	58	40.20163831127914	0.9045312054716443	0.9767441860465116	58	0	0.9767441860465116	58	0	NA	NA	NA	0.6054224795998947	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014946	Chromosome_6A	282	1	6	41.13475177304964	0.5444015444015444	13.6	6	0	13.6	6	0	NA	NA	NA	3.3762057877813505	30	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014947	Chromosome_6A	14981	11	246	34.53040517989454	0.560529555470178	0.5970149253731343	246	0	0.44136191677175285	28	0	0.6173347600625566	218	0	0.49002450122506125	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014948	Chromosome_6A	1014	2	23	35.99605522682446	0.7021315028901735	0.7412398921832885	22	0	0.8333333333333334	14	0	0.6544502617801047	8	0	0.45641259698767683	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014949	Chromosome_6A	2942	3	62	33.34466349422162	0.7587268310538751	0.6924852526288792	62	0	0.7062146892655368	17	0	0.6894390473205891	45	0	1.095890410958904	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014950	Chromosome_6A	552	1	18	40.57971014492754	0.80859375	1.1811023622047243	18	0	1.1811023622047243	18	0	NA	NA	NA	0.5384615384615384	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014951	Chromosome_6A	1253	2	29	35.833998403830805	0.7235851686646223	0.4702194357366771	29	0	0.5698005698005698	19	0	0.34843205574912894	10	0	0.22753128555176336	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014952	Chromosome_6A	273	1	9	42.49084249084249	0.7411764705882353	0.32786885245901637	9	0	0.32786885245901637	9	0	NA	NA	NA	0.35511363636363635	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014953	Chromosome_6A	798	1	26	36.8421052631579	0.9601554907677357	0.6443298969072165	26	0	0.6443298969072165	26	0	NA	NA	NA	0.7424328954882924	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014954	Chromosome_6A	704	2	23	39.77272727272727	0.8433333333333334	0.6129597197898424	23	0	0.6717850287907869	21	0	0	2	0	0.4878048780487805	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014955	Chromosome_6A	320	2	9	41.5625	0.6713286713286714	0.3125	9	0	0	7	0	1.36986301369863	2	0	0.39783001808318263	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014956	Chromosome_6A	14591	4	262	37.639640874511684	0.5132222276966996	83.59210380392592	260	0.926923076923077	64.43960826985854	70	0.7285714285714285	90.14063546394821	190	1	78.00794551645858	49	0.9183673469387755	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN014957	Chromosome_6A	306	1	10	42.48366013071895	0.7242603550295857	1.7094017094017093	10	0	1.7094017094017093	10	0	NA	NA	NA	1.9778099372889533	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014958	Chromosome_6A	887	2	35	41.26268320180383	0.9270484949832776	1.1816838995568686	34	0	1.2102874432677762	33	0	0	1	0	2.0080321285140563	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014959	Chromosome_6A	708	2	25	40.96045197740113	0.8422154548915113	0.5208333333333334	25	0	0.5208333333333334	25	0	NA	NA	NA	3.549899531145345	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014960	Chromosome_6A	4341	1	82	46.786454733932274	0.40616477901592657	0.827178729689808	82	0	0.827178729689808	82	0	NA	NA	NA	0.49305244285073957	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014961	Chromosome_6A	1131	4	34	37.13527851458886	0.8720518867924528	0.5534034311012729	34	0	0.5769230769230769	29	0	0.4048582995951417	5	0	0.985545335085414	58	0	unmethylated (<10%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN014962	Chromosome_6A	849	1	29	40.8716136631331	0.8198801198801199	0.44150110375275936	29	0	0.44150110375275936	29	0	NA	NA	NA	0.6003159557661928	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014963	Chromosome_6A	2106	3	33	40.123456790123456	0.3909873417721519	27.264957264957264	25	0.36	65.79520697167756	13	0.6923076923076923	2.390998593530239	12	0	1.1084718923198733	77	0	sparse (10-50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN014964	Chromosome_6A	270	1	10	39.25925925925926	1.0131332082551594	0.5319148936170213	10	0	0.5319148936170213	10	0	NA	NA	NA	0.43357613596947625	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014965	Chromosome_6A	13126	6	343	36.012494286149625	0.807120747807237	1.8257915807351692	343	0	0.7333333333333333	35	0	1.935139463499266	308	0	0.272108843537415	42	0	unmethylated (<10%)	Q92851	Caspase-10 (CASP-10) (EC 3.4.22.63) (Apoptotic protease Mch-4) (FAS-associated death domain protein interleukin-1B-converting enzyme 2) (FLICE2) (ICE-like apoptotic protease 4) [Cleaved into: Caspase-10 subunit p23/17; Caspase-10 subunit p12]	apoptotic process [GO:0006915]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of neuron apoptotic process [GO:0043525]; protein maturation [GO:0051604]; proteolysis [GO:0006508]	hit with GO BP
GN014966	Chromosome_6A	4694	5	132	37.98466126970601	0.7943590466788887	0.8074214052568287	132	0	1.5258215962441315	60	0	0.5100801554529998	72	0	0.7453416149068323	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014967	Chromosome_6A	207	1	2	40.09661835748792	0.24210526315789474	76.3157894736842	2	1	76.3157894736842	2	1	NA	NA	NA	80.6910569105691	26	1	NA	NA	NA	NA	no Swiss-Prot hit
GN014968	Chromosome_6A	9619	11	204	37.072460754756214	0.6181175581175581	79.24799671255394	202	0.8910891089108911	93.44978165938865	41	0.9024390243902439	77.21043151382254	161	0.8881987577639752	0.746268656716418	84	0	methylated (>=50%)	P00432	Catalase (EC 1.11.1.6)	hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]	hit with GO BP
GN014969	Chromosome_6A	8283	10	272	38.802366292406134	0.8730147228352162	1.3097694446936397	272	0	1.0638297872340425	76	0	1.3754689098556325	196	0	0.9247448979591837	55	0	unmethylated (<10%)	Q9PWF7	Catalase (EC 1.11.1.6)	hydrogen peroxide catabolic process [GO:0042744]; response to hydrogen peroxide [GO:0042542]	hit with GO BP
GN014970	Chromosome_6A	13188	13	423	37.73127085228996	0.901353114490015	0.8213070515076851	422	0	1.5963855421686748	90	0	0.6338336004662684	332	0	0.4337899543378995	82	0	unmethylated (<10%)	P70080	Tryptophan 5-hydroxylase 1 (EC 1.14.16.4) (Tryptophan 5-monooxygenase 1)	aromatic amino acid metabolic process [GO:0009072]; platelet degranulation [GO:0002576]; regulation of hemostasis [GO:1900046]; serotonin biosynthetic process [GO:0042427]	hit with GO BP
GN014971	Chromosome_6A	8493	4	206	37.3719533733663	0.6946811699798094	91.62397540983606	185	1	93.95532194480946	14	1	91.46196694365811	171	1	92.02156334231806	29	1	methylated (>=50%)	Q9W021	Large ribosomal subunit protein uL23m (39S ribosomal protein L23, mitochondrial) (L23mt) (MRP-L23)	mitochondrial translation [GO:0032543]	hit with GO BP
GN014972	Chromosome_6A	14056	7	118	40.11098463289699	0.264214861432829	81.71838716487228	107	0.9345794392523364	79.98815867377147	34	0.8529411764705882	82.67716535433071	73	0.9726027397260274	93.06666666666666	21	1	methylated (>=50%)	O89110	Caspase-8 (CASP-8) (EC 3.4.22.61) [Cleaved into: Caspase-8 subunit p18; Caspase-8 subunit p10]	angiogenesis [GO:0001525]; apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; cardiac muscle tissue development [GO:0048738]; cellular response to mechanical stimulus [GO:0071260]; execution phase of apoptosis [GO:0097194]; extrinsic apoptotic signaling pathway [GO:0097191]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; heart development [GO:0007507]; hepatocyte apoptotic process [GO:0097284]; macrophage differentiation [GO:0030225]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of necroptotic process [GO:0060546]; neural tube formation [GO:0001841]; positive regulation of apoptotic process [GO:0043065]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cell migration [GO:0030335]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of macrophage differentiation [GO:0045651]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of proteolysis [GO:0045862]; positive regulation of pyroptotic inflammatory response [GO:0140639]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of apoptotic signaling pathway [GO:2001233]; regulation of cytokine production [GO:0001817]; regulation of innate immune response [GO:0045088]; regulation of thymocyte apoptotic process [GO:0070243]; response to ethanol [GO:0045471]; response to tumor necrosis factor [GO:0034612]; self proteolysis [GO:0097264]; TRAIL-activated apoptotic signaling pathway [GO:0036462]	hit with GO BP
GN014973	Chromosome_6A	6971	4	188	36.26452445847081	0.8300244406486177	0.9316770186335404	188	0	1.1856770215793218	103	0	0.7084809335278183	85	0	0.544535200311163	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014974	Chromosome_6A	1170	1	28	42.30769230769231	0.5400949617515167	39.320388349514566	28	0.5357142857142857	39.320388349514566	28	0.5357142857142857	NA	NA	NA	0.9342560553633218	56	0	sparse (10-50%)	D3Z5S8	Terminal nucleotidyltransferase 5A (EC 2.7.7.19)	mRNA stabilization [GO:0048255]; positive regulation of bone mineralization [GO:0030501]; positive regulation of osteoblast differentiation [GO:0045669]; regulation of ossification [GO:0030278]; response to bacterium [GO:0009617]	hit with GO BP
GN014975	Chromosome_6A	477	1	2	42.55765199161426	0.49430051813471504	90	1	1	90	1	1	NA	NA	NA	65.45138888888889	33	0.8484848484848485	NA	NA	NA	NA	no Swiss-Prot hit
GN014976	Chromosome_6A	432	1	1	42.129629629629626	0.07894736842105263	73.01587301587301	1	1	73.01587301587301	1	1	NA	NA	NA	64.95327102803738	6	0.8333333333333334	NA	NA	NA	NA	no Swiss-Prot hit
GN014977	Chromosome_6A	14284	9	246	34.10809297115654	0.5922847958451485	71.83381088825215	242	0.8305785123966942	73.62997658079625	43	0.7906976744186046	71.50951374207189	199	0.8391959798994975	62.19269102990033	42	0.6428571428571429	methylated (>=50%)	P21839	2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDE1B) (BCKDH E1-beta)	branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA [GO:0120552]; response to nutrient [GO:0007584]	hit with GO BP
GN014978	Chromosome_6A	10356	9	153	37.41792197759753	0.423863530574968	74.87419945105215	153	0.8627450980392157	76.82317682317682	21	0.9523809523809523	74.62223944207672	132	0.8484848484848485	72.66949152542372	19	0.7368421052631579	methylated (>=50%)	O95260	Arginyl-tRNA--protein transferase 1 (Arginyltransferase 1) (R-transferase 1) (EC 2.3.2.8) (Arginine-tRNA--protein transferase 1)	proteasomal protein catabolic process [GO:0010498]; protein arginylation [GO:0016598]; response to oxidative stress [GO:0006979]; ubiquitin-dependent protein catabolic process [GO:0006511]; ubiquitin-dependent protein catabolic process via the N-end rule pathway [GO:0071596]	hit with GO BP
GN014979	Chromosome_6A	321	1	13	45.482866043613704	0.7867647058823529	NA	0	NA	NA	NA	NA	NA	NA	NA	2.1810250817884405	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014980	Chromosome_6A	5153	3	121	35.610324083058416	0.7408010702481008	85.6403889923443	121	0.8925619834710744	61.08490566037736	7	0.42857142857142855	86.7669335641636	114	0.9210526315789473	69.23601637107777	54	0.7037037037037037	methylated (>=50%)	Q9Y5L4	Mitochondrial import inner membrane translocase subunit Tim13	protein insertion into mitochondrial inner membrane [GO:0045039]	hit with GO BP
GN014981	Chromosome_6A	21031	13	459	36.317816556511815	0.6626867731118801	80.9133265254021	459	0.8061002178649237	93.95396770869117	142	0.9929577464788732	77.93760288469076	317	0.722397476340694	53.90753990093561	57	0.5263157894736842	methylated (>=50%)	Q5JWR5	Protein DOP1A	Golgi to endosome transport [GO:0006895]	hit with GO BP
GN014982	Chromosome_6A	1742	4	12	36.16532721010333	0.21080868486602597	10.731707317073171	7	0	8.823529411764707	5	0	12.62135922330097	2	0	1.6431924882629108	12	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN014983	Chromosome_6A	1324	2	22	35.87613293051359	0.5202729253742007	3.2467532467532467	22	0	5.339805825242719	11	0	1.5625	11	0	0.5057803468208093	48	0	unmethylated (<10%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN014984	Chromosome_6A	4366	4	114	36.69262482821805	0.7760628055102947	0.9912100243126987	114	0	1.0198878123406425	52	0	0.9746012994683992	62	0	0.4854368932038835	44	0	unmethylated (<10%)	Q6DBY9	Carbohydrate sulfotransferase 1 (EC 2.8.2.21) (Keratan sulfate Gal-6 sulfotransferase) (KS6ST) (KSGal6ST) (KSST)	carbohydrate metabolic process [GO:0005975]; keratan sulfate proteoglycan metabolic process [GO:0042339]; N-acetylglucosamine metabolic process [GO:0006044]; sulfur compound metabolic process [GO:0006790]	hit with GO BP
GN014985	Chromosome_6A	387	1	16	46.770025839793284	0.7732267732267732	0.5347593582887701	16	0	0.5347593582887701	16	0	NA	NA	NA	2.1697663328564616	91	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014986	Chromosome_6A	8474	9	225	35.09558649988199	0.8624702298156454	0.7971586424625099	225	0	0.7765314926660914	84	0	0.8049602958772979	141	0	2.0999275887038378	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014987	Chromosome_6A	621	1	32	45.088566827697264	1.0256516129032258	0.48746518105849584	32	0	0.48746518105849584	32	0	NA	NA	NA	1.0141253169141615	63	0	unmethylated (<10%)	Q3B8D7	Dynein light chain Tctex-type 5-A (Tctex1 domain-containing protein 1-A)	microtubule-based movement [GO:0007018]	hit with GO BP
GN014988	Chromosome_6A	3950	6	139	39.924050632911396	0.8830975404193446	1.5934065934065933	139	0	1.453287197231834	79	0	1.7509727626459144	60	0	0.6717850287907869	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014989	Chromosome_6A	4062	4	155	39.7341211225997	0.966786438179473	0.9784381228483421	152	0	0.8201202843083653	49	0	1.056910569105691	103	0	0.22284122562674094	48	0	unmethylated (<10%)	Q9FWW3	Flavin-containing monooxygenase FMO GS-OX-like 6 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase-like 6)	glucosinolate biosynthetic process [GO:0019761]; response to abscisic acid [GO:0009737]; response to jasmonic acid [GO:0009753]; response to salicylic acid [GO:0009751]	hit with GO BP
GN014990	Chromosome_6A	7655	5	243	36.93011103853691	0.9310414727168984	0.8665173790283321	243	0	0.6955591225254146	60	0	0.9045465365389193	183	0	0.5692599620493358	50	0	unmethylated (<10%)	Q9FWW3	Flavin-containing monooxygenase FMO GS-OX-like 6 (EC 1.8.-.-) (Flavin-monooxygenase glucosinolate S-oxygenase-like 6)	glucosinolate biosynthetic process [GO:0019761]; response to abscisic acid [GO:0009737]; response to jasmonic acid [GO:0009753]; response to salicylic acid [GO:0009751]	hit with GO BP
GN014991	Chromosome_6A	2455	3	84	40.08146639511202	0.8525186547882345	0.8360704687966557	84	0	0.4837595024187975	38	0	1.1041009463722398	46	0	1.2048192771084338	42	0	unmethylated (<10%)	Q5LT63	Trimethylamine monooxygenase (TMA monooxygenase) (Tmm) (EC 1.14.13.148)	NA	hit, no GO BP
GN014992	Chromosome_6A	9376	6	290	37.85196245733788	0.8641749300788203	0.9359070777972759	290	0	0.6334841628959276	69	0	1.004407092343958	221	0	1.243279569892473	65	0	unmethylated (<10%)	B8EIZ7	Trimethylamine monooxygenase (TMA monooxygenase) (Tmm) (EC 1.14.13.148)	NA	hit, no GO BP
GN014993	Chromosome_6A	4015	5	83	36.83686176836862	0.6104170864396534	79.21706619749285	82	0.7926829268292683	54.04699738903394	12	0.3333333333333333	84.31631843427665	70	0.8714285714285714	33.378979801437865	40	0.375	methylated (>=50%)	Q9VHK6	Iron-sulfur cluster assembly enzyme IscU (fIscU)	[2Fe-2S] cluster assembly [GO:0044571]; intracellular iron ion homeostasis [GO:0006879]; positive regulation of mitochondrial electron transport, NADH to ubiquinone [GO:1902958]	hit with GO BP
GN014994	Chromosome_6A	12776	12	214	34.94834063869756	0.5487252171267301	74.23396431976032	213	0.8075117370892019	46.81919642857143	29	0.5172413793103449	78.04405149682023	184	0.8532608695652174	35.5249745158002	35	0.37142857142857144	methylated (>=50%)	Q9JK66	E3 ubiquitin-protein ligase parkin (EC 2.3.2.31) (Parkin RBR E3 ubiquitin-protein ligase)	adult locomotory behavior [GO:0008344]; aggresome assembly [GO:0070842]; autophagy of mitochondrion [GO:0000422]; cellular response to hydrogen sulfide [GO:1904881]; cellular response to L-glutamate [GO:1905232]; cellular response to L-glutamine [GO:1904845]; cellular response to manganese ion [GO:0071287]; cellular response to oxidative stress [GO:0034599]; cellular response to toxic substance [GO:0097237]; dopamine metabolic process [GO:0042417]; dopamine uptake involved in synaptic transmission [GO:0051583]; free ubiquitin chain polymerization [GO:0010994]; host-mediated suppression of viral genome replication [GO:0044828]; learning [GO:0007612]; locomotory behavior [GO:0007626]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; mitochondrion localization [GO:0051646]; mitochondrion organization [GO:0007005]; mitochondrion to lysosome vesicle-mediated transport [GO:0099074]; mitophagy [GO:0000423]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of actin filament bundle assembly [GO:0032232]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway [GO:1903382]; negative regulation of excitatory postsynaptic potential [GO:0090394]; negative regulation of exosomal secretion [GO:1903542]; negative regulation of gene expression [GO:0010629]; negative regulation of glucokinase activity [GO:0033132]; negative regulation of insulin secretion [GO:0046676]; negative regulation of intralumenal vesicle formation [GO:1905366]; negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO:1902254]; negative regulation of JNK cascade [GO:0046329]; negative regulation of mitochondrial fission [GO:0090258]; negative regulation of mitochondrial fusion [GO:0010637]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway [GO:1903377]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; negative regulation of release of cytochrome c from mitochondria [GO:0090201]; negative regulation of spontaneous neurotransmitter secretion [GO:1904049]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron cellular homeostasis [GO:0070050]; norepinephrine metabolic process [GO:0042415]; positive regulation of apoptotic process [GO:0043065]; positive regulation of ATP biosynthetic process [GO:2001171]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of dendrite extension [GO:1903861]; positive regulation of gene expression [GO:0010628]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of mitochondrial fission [GO:0090141]; positive regulation of mitochondrial fusion [GO:0010636]; positive regulation of mitochondrial membrane potential [GO:0010918]; positive regulation of mitophagy [GO:1901526]; positive regulation of neurotransmitter uptake [GO:0051582]; positive regulation of proteasomal protein catabolic process [GO:1901800]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein linear polyubiquitination [GO:1902530]; positive regulation of protein localization to membrane [GO:1905477]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor-mediated signaling pathway [GO:1903265]; positive regulation of type 2 mitophagy [GO:1905091]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein autoubiquitination [GO:0051865]; protein catabolic process [GO:0030163]; protein destabilization [GO:0031648]; protein K11-linked ubiquitination [GO:0070979]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked ubiquitination [GO:0070936]; protein K6-linked ubiquitination [GO:0085020]; protein K63-linked ubiquitination [GO:0070534]; protein localization to mitochondrion [GO:0070585]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein stabilization [GO:0050821]; protein ubiquitination [GO:0016567]; regulation of autophagy [GO:0010506]; regulation of cellular response to oxidative stress [GO:1900407]; regulation of dopamine metabolic process [GO:0042053]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of mitochondrion organization [GO:0010821]; regulation of neurotransmitter secretion [GO:0046928]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; regulation of protein stability [GO:0031647]; regulation of protein ubiquitination [GO:0031396]; regulation of reactive oxygen species metabolic process [GO:2000377]; regulation of synaptic vesicle endocytosis [GO:1900242]; regulation protein catabolic process at presynapse [GO:0140251]; response to corticosterone [GO:0051412]; response to curcumin [GO:1904643]; response to endoplasmic reticulum stress [GO:0034976]; response to muscle activity [GO:0014850]; response to oxidative stress [GO:0006979]; response to unfolded protein [GO:0006986]; response to xenobiotic stimulus [GO:0009410]; startle response [GO:0001964]; synaptic transmission, dopaminergic [GO:0001963]; synaptic transmission, glutamatergic [GO:0035249]; type 2 mitophagy [GO:0061734]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN014995	Chromosome_6A	1539	1	68	41.71539961013645	1.0271580703734602	0.8138020833333334	68	0	0.8138020833333334	68	0	NA	NA	NA	0.49063336306868865	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014996	Chromosome_6A	1295	2	35	37.45173745173745	0.7724886661894536	0.44659471529586897	35	0	0.43478260869565216	15	0	0.4554326610279766	20	0	0.6198347107438017	39	0	unmethylated (<10%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN014997	Chromosome_6A	297	1	8	44.10774410774411	0.5546218487394958	0.7125890736342043	8	0	0.7125890736342043	8	0	NA	NA	NA	0.6556442417331813	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN014998	Chromosome_6A	198	1	11	57.07070707070707	0.7066839714471123	0	3	0	0	3	0	NA	NA	NA	0.5970149253731343	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN014999	Chromosome_6A	11920	9	206	36.669463087248324	0.5149958955864026	87.9407616361072	206	0.9660194174757282	92.1875	34	0.9411764705882353	87.17762063227953	172	0.9709302325581395	61.3682092555332	36	0.5833333333333334	methylated (>=50%)	Q8CI66	Stomatin-like protein 1 (SLP-1)	cellular response to leukemia inhibitory factor [GO:1990830]	hit with GO BP
GN015000	Chromosome_6A	3298	5	71	39.87265009096422	0.5449920168321487	81.15595075239398	71	0.9014084507042254	84.51306413301663	59	0.9152542372881356	72.52747252747253	12	0.8333333333333334	65.96491228070175	28	0.8571428571428571	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015001	Chromosome_6A	2462	3	63	39.886271324126724	0.6445561835106383	90.29642058165548	63	0.9841269841269841	90.1824034334764	35	0.9714285714285714	90.42056074766356	28	1	36.16484440706476	20	0.3	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015002	Chromosome_6A	4528	5	170	40.90106007067138	0.8977086132258546	0.49328583173472185	162	0	0.4142300194931774	104	0	0.5948653725735754	58	0	0.4581901489117984	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015003	Chromosome_6A	22409	18	573	36.1372662769423	0.7832282195869318	0.6815448349592409	573	0	0.6597031335898845	100	0	0.686414708886619	473	0	0.3487792725460887	34	0	unmethylated (<10%)	Q8MSU3	Ferric reductase 1 (EC 1.-.-.-) (stromal cell-derived receptor 2)	intracellular iron ion homeostasis [GO:0006879]	hit with GO BP
GN015004	Chromosome_6A	1924	4	56	39.34511434511435	0.7631027253668763	0.7129277566539924	56	0	0.7364544976328248	51	0	0.49261083743842365	5	0	0.34000755572346053	61	0	unmethylated (<10%)	P10959	Carboxylesterase 1C (EC 3.1.1.1) (Carboxyesterase ES-1) (E1) (ES-THET) (Esterase-2) (Liver carboxylesterase 1) (Neutral retinyl ester hydrolase) (NREH) (Retinyl ester hydrolase) (REH)	short-chain fatty acid catabolic process [GO:0019626]	hit with GO BP
GN015005	Chromosome_6A	1822	2	53	40.944017563117455	0.7013545411627992	0.5200208008320333	53	0	0.4610951008645533	50	0	1.0638297872340425	3	0	1.9088826673453805	79	0	unmethylated (<10%)	P21927	Cholinesterase (EC 3.1.1.8) (Acylcholine acylhydrolase) (Butyrylcholine esterase) (Choline esterase II) (Pseudocholinesterase)	acetylcholine catabolic process [GO:0006581]; choline metabolic process [GO:0019695]	hit with GO BP
GN015006	Chromosome_6A	653	2	35	47.93261868300153	0.9339244851258581	1.4018691588785046	35	0	0.6289308176100629	24	0	2.37467018469657	11	0	0.6972690296339338	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015007	Chromosome_6A	1560	1	51	42.37179487179487	0.7378691200474848	0.4069767441860465	51	0	0.4069767441860465	51	0	NA	NA	NA	0.6693108577094695	59	0	unmethylated (<10%)	P06276	Cholinesterase (EC 3.1.1.8) (Acylcholine acylhydrolase) (Butyrylcholine esterase) (Choline esterase II) (Pseudocholinesterase)	acetylcholine catabolic process [GO:0006581]; choline metabolic process [GO:0019695]; cocaine catabolic process [GO:0050784]; learning [GO:0007612]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of synaptic transmission [GO:0050805]; neuroblast differentiation [GO:0014016]; peptide hormone processing [GO:0016486]; response to alkaloid [GO:0043279]; response to folic acid [GO:0051593]; response to glucocorticoid [GO:0051384]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN015008	Chromosome_6A	71059	45	1147	35.895523438269606	0.5036720095478379	86.52770005595971	1127	0.9618456078083407	91.34146341463415	140	0.9928571428571429	85.97347893915757	987	0.9574468085106383	77.32558139534883	18	1	methylated (>=50%)	Q9Z0R4	Intersectin-1 (EH and SH3 domains protein 1)	cell-cell signaling [GO:0007267]; clathrin-dependent synaptic vesicle endocytosis [GO:0150007]; endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; negative regulation of neuron apoptotic process [GO:0043524]; positive regulation of caveolin-mediated endocytosis [GO:2001288]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of growth hormone secretion [GO:0060124]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; regulation of modification of postsynaptic actin cytoskeleton [GO:1905274]; regulation of postsynapse organization [GO:0099175]; small GTPase-mediated signal transduction [GO:0007264]; synaptic vesicle endocytosis [GO:0048488]	hit with GO BP
GN015009	Chromosome_6A	597	1	22	42.54606365159129	0.818419740777667	0.3448275862068966	16	0	0.3448275862068966	16	0	NA	NA	NA	0.7731958762886598	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015010	Chromosome_6A	451	2	1	40.354767184035474	0.05930309007232084	9.375	1	0	9.375	1	0	NA	NA	NA	1.8922852983988354	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015011	Chromosome_6A	1115	3	29	37.847533632286996	0.7358061212879736	0.39491004826678366	29	0	0.29390154298310067	18	0	0.5446623093681917	11	0	0.3839824465167307	49	0	unmethylated (<10%)	P19477	Fibrinogen-like protein A (FREP-A)	NA	hit, no GO BP
GN015012	Chromosome_6A	219	1	8	41.0958904109589	0.8690476190476191	0.6273525721455459	8	0	0.6273525721455459	8	0	NA	NA	NA	0.6703910614525139	34	0	unmethylated (<10%)	Q9U8W7	Techylectin-5B	cell-cell adhesion [GO:0098609]; positive regulation of heterotypic cell-cell adhesion [GO:0034116]	hit with GO BP
GN015013	Chromosome_6A	1011	1	35	40.454995054401586	0.8824629657339518	5.369515011547344	33	0	5.369515011547344	33	0	NA	NA	NA	1.9697663765460376	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015014	Chromosome_6A	673	3	15	37.444279346211	0.6438137755102041	0.09746588693957114	15	0	0.2242152466367713	6	0	0	9	0	1.7388087310395857	56	0	unmethylated (<10%)	E2IYB3	Veficolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN010182	Chromosome_6A	563	2	7	36.9449378330373	0.3732007575757576	3.9735099337748343	7	0	5.357142857142857	6	0	0	1	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012254	Chromosome_6A	1812	4	13	35.8719646799117	0.22303438872898046	76.21023513139696	13	1	78.27715355805243	11	1	70.37037037037037	2	1	12.327044025157234	17	0.058823529411764705	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015015	Chromosome_6A	450	1	44	45.333333333333336	1.921583850931677	0.3816793893129771	41	0	0.3816793893129771	41	0	NA	NA	NA	1.1148272017837235	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015016	Chromosome_6A	315	1	17	47.93650793650794	0.9807692307692307	0.5952380952380952	17	0	0.5952380952380952	17	0	NA	NA	NA	0.4735376044568245	48	0	unmethylated (<10%)	Q7Q5J5	Pfs47 receptor (AgP47Rec) (P47Rec)	NA	hit, no GO BP
GN015017	Chromosome_6A	432	1	17	46.06481481481482	0.7536945812807881	0.373134328358209	17	0	0.373134328358209	17	0	NA	NA	NA	0.48120300751879697	45	0	unmethylated (<10%)	Q7Q5J5	Pfs47 receptor (AgP47Rec) (P47Rec)	NA	hit, no GO BP
GN015018	Chromosome_6A	438	1	25	51.141552511415526	0.8774038461538461	1.36986301369863	25	0	1.36986301369863	25	0	NA	NA	NA	0.5679129200189305	47	0	unmethylated (<10%)	Q7Q5J5	Pfs47 receptor (AgP47Rec) (P47Rec)	NA	hit, no GO BP
GN015019	Chromosome_6A	5133	5	167	37.87258912916423	0.9089261724329156	0.6784888203546646	167	0	0.5847953216374269	85	0	0.7546115148127446	82	0	0.6019261637239165	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015020	Chromosome_6A	948	1	39	38.81856540084388	1.0959537572254334	0.4086845466155811	39	0	0.4086845466155811	39	0	NA	NA	NA	0.6622516556291391	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015021	Chromosome_6A	288	1	6	40.27777777777778	0.5192307692307693	0.7874015748031497	6	0	0.7874015748031497	6	0	NA	NA	NA	0.31508467900748327	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015022	Chromosome_6A	1278	2	34	37.40219092331768	0.7728784617847424	0.7471980074719801	34	0	0.4032258064516129	27	0	1.3029315960912051	7	0	1.0565568676196395	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015023	Chromosome_6A	876	1	26	38.470319634703195	0.8463768115942029	3.5073409461663947	26	0	3.5073409461663947	26	0	NA	NA	NA	2.481520591341077	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015024	Chromosome_6A	26957	9	572	35.13373149831213	0.6876945198172499	1.203741358275722	264	0	1.3962005035477225	96	0	1.0976532929598788	168	0	8.695652173913043	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021444	Chromosome_6A	2720	9	52	41.029411764705884	0.4572330032747245	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015025	Chromosome_6A	2564	2	73	37.129485179407176	0.8311109334967386	0	6	0	0	6	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015026	Chromosome_6A	4259	6	106	34.25686780934492	0.8497157914549219	6.6371681415929205	13	0	NA	NA	NA	6.6371681415929205	13	0	0	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015027	Chromosome_6A	2256	4	94	39.67198581560284	1.058996254681648	0.4916136495083864	94	0	0.5036373810856184	50	0	0.47875523638539796	44	0	0.9041591320072333	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015028	Chromosome_6A	965	2	38	41.13989637305699	0.9388120839733743	0.5487804878048781	38	0	0.5411255411255411	30	0	0.5586592178770949	8	0	32.16155572176515	22	0.2727272727272727	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015029	Chromosome_6A	654	2	20	43.11926605504587	0.6600393601453297	86	20	0.95	90.29850746268657	18	1	62.32876712328767	2	0.5	43.0188679245283	15	0.4	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015030	Chromosome_6A	3614	6	52	36.19258439402324	0.4447663135573164	85.17241379310344	23	0.9565217391304348	87.00906344410876	11	1	83.62944162436548	12	0.9166666666666666	NA	NA	NA	methylated (>=50%)	Q9BWD1	Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9) (Acetyl-CoA transferase-like protein) (Cytosolic acetoacetyl-CoA thiolase)	farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; fatty acid metabolic process [GO:0006631]; lipid metabolic process [GO:0006629]	hit with GO BP
GN015031	Chromosome_6A	8283	4	167	36.242907159241824	0.6150130915716422	81.97515073999635	161	0.9316770186335404	63.205417607223474	9	0.7777777777777778	82.76682852518329	152	0.9407894736842105	29.02025630425796	41	0.34146341463414637	methylated (>=50%)	Q5XI22	Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase)	cellular response to fatty acid [GO:0071398]; cellular response to nutrient [GO:0031670]; cholesterol biosynthetic process via desmosterol [GO:0033489]; cholesterol biosynthetic process via lathosterol [GO:0033490]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; fatty acid metabolic process [GO:0006631]; geranylgeranyl diphosphate biosynthetic process [GO:0033386]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]; ketone body catabolic process [GO:0046952]; liver development [GO:0001889]; phosphate-containing compound metabolic process [GO:0006796]; zymosterol biosynthetic process [GO:0036197]	hit with GO BP
GN015032	Chromosome_6A	2159	5	29	35.896248263084765	0.4230644485587254	80.74324324324324	29	0.896551724137931	68.78787878787878	10	0.8	87.81362007168458	19	0.9473684210526315	39.31467433952393	59	0.4067796610169492	methylated (>=50%)	P0CX27	Large ribosomal subunit protein eL42A (60S ribosomal protein L42-A) (L41) (YL27) (YP44)	cytoplasmic translation [GO:0002181]	hit with GO BP
GN015033	Chromosome_6A	38183	55	620	34.04918419191787	0.5606046010125308	85.18962458646978	582	0.9725085910652921	86.69358094469116	187	0.983957219251337	84.55453646561423	395	0.9670886075949368	62.98449612403101	14	0.7857142857142857	methylated (>=50%)	A0A0R4IBK5	E3 ubiquitin-protein ligase rnf213-alpha (EC 2.3.2.27) (EC 3.6.4.-) (E3 ubiquitin-lipopolysaccharide ligase rnf213-alpha) (EC 2.3.2.-) (Mysterin-A) (Mysterin-alpha) (RING finger protein 213-A) (RING finger protein 213-alpha)	blood circulation [GO:0008015]; defense response to bacterium [GO:0042742]; lipid droplet formation [GO:0140042]; lipid ubiquitination [GO:0120323]; negative regulation of non-canonical Wnt signaling pathway [GO:2000051]; protein K63-linked ubiquitination [GO:0070534]; regulation of angiogenesis [GO:0045765]; regulation of lipid metabolic process [GO:0019216]; sprouting angiogenesis [GO:0002040]; ubiquitin-dependent protein catabolic process [GO:0006511]; xenophagy [GO:0098792]	hit with GO BP
GN015034	Chromosome_6A	19914	15	318	34.70422818117907	0.5320545845914978	72.01035547147266	246	0.8577235772357723	77.30706075533662	58	0.8793103448275862	69.70563018005144	188	0.851063829787234	32.4	8	0.125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017782	Chromosome_6A	4476	3	34	36.77390527256479	0.22704778500700462	77.5709219858156	26	0.9230769230769231	66.66666666666667	2	1	78.58527131782945	24	0.9166666666666666	53.96825396825397	4	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003642	Chromosome_6A	1256	1	45	44.10828025477707	0.7404787171324136	90.39634146341463	38	1	90.39634146341463	38	1	NA	NA	NA	80.15243902439025	49	0.9591836734693877	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015035	Chromosome_6A	516	1	15	47.286821705426355	0.5205811138014528	0	5	0	0	5	0	NA	NA	NA	0.4608294930875576	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015036	Chromosome_6A	14902	14	259	36.277009797342636	0.5321520594392714	88.32461722638776	250	0.944	87.39653875094055	47	0.9148936170212766	88.51131461439492	203	0.9507389162561576	67.62022194821208	57	0.6491228070175439	methylated (>=50%)	O60508	Pre-mRNA-processing factor 17 (Cell division cycle 40 homolog) (EH-binding protein 3) (Ehb3) (PRP17 homolog) (hPRP17)	embryonic brain development [GO:1990403]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN015037	Chromosome_6A	717	1	25	45.04881450488145	0.9728101595571476	96.22418879056048	25	1	96.22418879056048	25	1	NA	NA	NA	27.114210985178726	19	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015038	Chromosome_6A	5043	5	89	38.31052944675788	0.48172289291111414	94.93509798931025	85	1	94.9361514751211	53	1	94.93365500603136	32	1	88.96631823461092	39	0.9487179487179487	methylated (>=50%)	Q9UPY6	Actin-binding protein WASF3 (Protein WAVE-3) (Verprolin homology domain-containing protein 3) (Wiskott-Aldrich syndrome protein family member 3) (WASP family protein member 3)	actin filament polymerization [GO:0030041]; modification of postsynaptic actin cytoskeleton [GO:0098885]; positive regulation of Arp2/3 complex-mediated actin nucleation [GO:2000601]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN015039	Chromosome_6A	36077	20	606	34.570501981872106	0.5624082403509082	74.71050853999807	604	0.8658940397350994	84.51479697178252	80	0.975	73.55835332812121	524	0.8492366412213741	69.62264150943396	23	0.8695652173913043	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015040	Chromosome_6A	12232	12	116	35.963047743623285	0.29595638846570366	65.68877551020408	116	0.7413793103448276	70.86614173228347	33	0.7878787878787878	64.12991939307729	83	0.7228915662650602	1.9	29	0	methylated (>=50%)	P28227	NADP-dependent malic enzyme (NADP-ME) (EC 1.1.1.40)	malate metabolic process [GO:0006108]	hit with GO BP
GN015041	Chromosome_6A	4046	2	66	36.0850222441918	0.5021257552025061	78.78370941111723	66	0.8333333333333334	72.25170583775588	28	0.7142857142857143	82.50539956803456	38	0.9210526315789473	54.38992898644287	45	0.6444444444444445	methylated (>=50%)	Q96DA2	Ras-related protein Rab-39B (EC 3.6.5.2)	Rab protein signal transduction [GO:0032482]; regulation of autophagy [GO:0010506]; synapse organization [GO:0050808]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN015042	Chromosome_6A	618	1	0	40.614886731391586	0	NA	0	NA	NA	NA	NA	NA	NA	NA	70.2127659574468	27	0.8518518518518519	NA	NA	NA	NA	no Swiss-Prot hit
GN015043	Chromosome_6A	16776	15	226	37.14234620886982	0.3992939590529952	79.6853092381991	226	0.8849557522123894	86.01983880967143	74	0.9594594594594594	77.55930087390762	152	0.8486842105263158	58.20456217807211	19	0.6842105263157895	methylated (>=50%)	Q9UPX8	SH3 and multiple ankyrin repeat domains protein 2 (Shank2) (Cortactin-binding protein 1) (CortBP1) (Proline-rich synapse-associated protein 1)	adult behavior [GO:0030534]; associative learning [GO:0008306]; learning [GO:0007612]; long-term synaptic depression [GO:0060292]; long-term synaptic potentiation [GO:0060291]; negative regulation of hippo signaling [GO:0035331]; positive regulation of cell population proliferation [GO:0008284]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; synapse organization [GO:0050808]; vocalization behavior [GO:0071625]	hit with GO BP
GN015044	Chromosome_6A	18612	8	275	38.43756716097142	0.4002063310994872	54.09330985915493	272	0.5772058823529411	70.31975949713036	116	0.7241379310344828	46.38358654720166	156	0.46794871794871795	40.74074074074074	23	0.21739130434782608	methylated (>=50%)	Q9QX74	SH3 and multiple ankyrin repeat domains protein 2 (Shank2) (Cortactin-binding protein 1) (CortBP1) (GKAP/SAPAP-interacting protein) (Proline-rich synapse-associated protein 1) (ProSAP1) (SPANK-3)	adult behavior [GO:0030534]; adult locomotory behavior [GO:0008344]; associative learning [GO:0008306]; exploration behavior [GO:0035640]; learning [GO:0007612]; long-term synaptic depression [GO:0060292]; long-term synaptic potentiation [GO:0060291]; memory [GO:0007613]; negative regulation of hippo signaling [GO:0035331]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of synaptic transmission, glutamatergic [GO:0051968]; regulation of postsynapse organization [GO:0099175]; response to nutrient [GO:0007584]; response to xenobiotic stimulus [GO:0009410]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; vocalization behavior [GO:0071625]	hit with GO BP
GN015045	Chromosome_6A	33567	10	825	37.119790270205854	0.7134943901617824	0.6733918511725403	814	0	0.5253480430785396	75	0	0.6897956807730369	739	0	0.587293112653497	39	0	unmethylated (<10%)	Q9EPT5	Solute carrier organic anion transporter family member 2A1 (SLCO2A1) (OATP2A1) (PHOAR2) (Prostaglandin transporter) (PGT) (Solute carrier family 21 member 2) (SLC21A2)	prostaglandin transport [GO:0015732]; sodium-independent organic anion transport [GO:0043252]	hit with GO BP
GN015046	Chromosome_6A	2279	2	54	36.77051338306275	0.7062003270880556	0.7313317936874519	54	0	0.762745885186672	51	0	0	3	0	0.9036144578313253	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015047	Chromosome_6A	3908	4	96	34.92835209825998	0.807028110721999	0.6404992609623912	96	0	0.5089058524173028	19	0	0.6720977596741344	77	0	0.41334514319456744	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015048	Chromosome_6A	360	1	15	47.77777777777778	0.7302231237322515	0.45871559633027525	15	0	0.45871559633027525	15	0	NA	NA	NA	3.4358769476628046	65	0	unmethylated (<10%)	F1QC17	EMILIN-1-A (Elastin microfibril interfacer 1a)	axon arborization [GO:0140060]; hemopoiesis [GO:0030097]	hit with GO BP
GN015049	Chromosome_6A	261	1	7	45.593869731800766	0.5161016949152543	1.5748031496062993	7	0	1.5748031496062993	7	0	NA	NA	NA	0.7817811012916384	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015050	Chromosome_6A	1972	2	84	39.249492900608516	1.1060306607553014	0.5652082897215825	84	0	0.34324942791762014	27	0	0.6932981181908221	57	0	0.8166491043203372	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015051	Chromosome_6A	261	1	7	45.593869731800766	0.5161016949152543	0	5	0	0	5	0	NA	NA	NA	0.6213592233009708	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015052	Chromosome_6A	20473	22	317	36.301470229082206	0.4754170870556669	91.29823739532705	314	0.9936305732484076	95.11627906976744	101	1	89.83558759212764	213	0.9906103286384976	19.03064861012117	39	0.1794871794871795	methylated (>=50%)	Q5FWR0	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 (EC 3.6.4.-)	DNA double-strand break processing [GO:0000729]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN015053	Chromosome_6A	1697	3	53	39.54036535061874	0.8044524346177239	0.7065669160432253	53	0	0.775623268698061	41	0	0.49916805324459235	12	0	0.4291845493562232	62	0	unmethylated (<10%)	Q13201	Multimerin-1 (EMILIN-4) (Elastin microfibril interface located protein 4) (Elastin microfibril interfacer 4) (Endothelial cell multimerin) [Cleaved into: Platelet glycoprotein Ia*; 155 kDa platelet multimerin (p-155) (p155)]	blood coagulation [GO:0007596]; cell adhesion [GO:0007155]; cell adhesion mediated by integrin [GO:0033627]; negative regulation of cell migration involved in sprouting angiogenesis [GO:0090051]; negative regulation of vascular endothelial growth factor receptor signaling pathway [GO:0030948]; negative regulation of wound healing [GO:0061045]; positive regulation of platelet aggregation [GO:1901731]	hit with GO BP
GN015054	Chromosome_6A	1697	3	54	39.42251031231585	0.8245721381395432	0.5627857896588111	54	0	0.4130335016062414	43	0	1.0542168674698795	11	0	0.9000900090009001	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010922	Chromosome_6A	1019	2	16	33.46418056918547	0.5682816312303939	37.64404609475032	16	0.125	45.87155963302752	10	0.2	29.02097902097902	6	0	4.777327935222672	93	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN021281	Chromosome_6A	1300	4	6	28.923076923076923	0.2229654403567447	46.260162601626014	6	0.3333333333333333	NA	NA	NA	46.260162601626014	6	0.3333333333333333	42.18362282878412	8	0.25	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015055	Chromosome_6A	516	1	27	46.31782945736434	0.9832039520112915	3.28125	27	0	3.28125	27	0	NA	NA	NA	2.0826102047900035	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015056	Chromosome_6A	42970	24	725	36.86990923900396	0.4973516830093908	56.98147864686974	634	0.6182965299684543	70.71850393700787	116	0.6896551724137931	55.029544421523724	518	0.6023166023166023	0.6899724011039559	64	0	methylated (>=50%)	Q4R8T1	EF-hand calcium-binding domain-containing protein 6 (DJ-1-binding protein) (DJBP)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN015057	Chromosome_6A	2236	2	84	40.429338103756706	0.9200969946359027	0.3963011889035667	62	0	0.23255813953488372	18	0	0.4612546125461255	44	0	0.43238993710691825	39	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015058	Chromosome_6A	825	2	12	39.515151515151516	0.37267080745341613	1.7482517482517483	11	0	1.8181818181818181	9	0	1.5151515151515151	2	0	2.7517886626307098	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015059	Chromosome_6A	7293	7	128	36.26765391471274	0.533737680060652	13.010657193605685	100	0	8.16326530612245	32	0	14.922600619195046	68	0	29.166666666666668	2	0	sparse (10-50%)	Q6P1E8	EF-hand calcium-binding domain-containing protein 6 (DJ-1-binding protein) (DJBP)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN015060	Chromosome_6A	2236	2	85	40.69767441860465	0.9186923883778597	0.697350069735007	51	0	0	12	0	0.9881422924901185	39	0	0.48426150121065376	39	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015061	Chromosome_6A	33661	18	646	35.14155848014022	0.6216245823081319	1.2848116903745015	618	0	0.7301935012778387	76	0	1.3441700531416068	542	0	0.4932182490752158	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015062	Chromosome_6A	4188	5	128	37.082139446036294	0.8919949681515944	0.5242227042660882	128	0	0.6357279084551812	28	0	0.47991917150795654	100	0	0.7683215130023641	54	0	unmethylated (<10%)	O00602	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; host-mediated suppression of symbiont invasion [GO:0046597]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of opsonization [GO:1903028]; protein localization to cell surface [GO:0034394]; proteolysis [GO:0006508]; recognition of apoptotic cell [GO:0043654]	hit with GO BP
GN015063	Chromosome_6A	5446	6	151	35.126698494307746	0.8988566806575726	0.64882400648824	151	0	0.6273525721455459	27	0	0.6536876509876368	124	0	0.6365900913368392	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015064	Chromosome_6A	4907	7	56	34.70552272264113	0.3859752620297721	0.9948910997579995	56	0	0.6479481641468683	16	0	1.1099176512710347	40	0	0.8243500317057705	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015065	Chromosome_6A	2168	4	25	35.2859778597786	0.37238062521470283	92.21556886227545	5	1	100	1	1	91.44736842105263	4	1	NA	NA	NA	methylated (>=50%)	Q9BWD1	Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9) (Acetyl-CoA transferase-like protein) (Cytosolic acetoacetyl-CoA thiolase)	farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; fatty acid metabolic process [GO:0006631]; lipid metabolic process [GO:0006629]	hit with GO BP
GN015066	Chromosome_6A	10688	3	281	38.66017964071856	0.705518819180217	1.978088861838101	252	0	0.530705079605762	60	0	2.5069252077562325	192	0	0.6255212677231026	58	0	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015067	Chromosome_6A	6474	2	175	35.34136546184739	0.8657778742342915	1.171757636454682	171	0	1.1627906976744187	17	0	1.1722462773260112	154	0	15.528196981731533	39	0	unmethylated (<10%)	Q8R066	Complement C1q tumor necrosis factor-related protein 4 (C1q/TNF-related protein 4)	cell surface receptor signaling pathway via STAT [GO:0097696]; gene expression [GO:0010467]; inflammatory response [GO:0006954]; macrophage activation [GO:0042116]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-6-mediated signaling pathway [GO:0070105]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of tumor necrosis factor production [GO:0032760]; protein import [GO:0017038]; protein phosphorylation [GO:0006468]; reduction of food intake in response to dietary excess [GO:0002023]; response to lipopolysaccharide [GO:0032496]; response to wounding [GO:0009611]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN015068	Chromosome_6A	1050	1	80	67.33333333333333	0.6751868820834338	NA	0	NA	NA	NA	NA	NA	NA	NA	8.13953488372093	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015069	Chromosome_6A	1532	5	43	42.16710182767624	0.6346435452793834	NA	0	NA	NA	NA	NA	NA	NA	NA	0.5369127516778524	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015070	Chromosome_6A	1458	3	33	36.83127572016461	0.6677862595419848	0.5791505791505791	29	0	0.4149377593360996	14	0	0.7220216606498195	15	0	1.6455696202531647	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015071	Chromosome_6A	150	1	11	48.666666666666664	1.2790697674418605	0	11	0	0	11	0	NA	NA	NA	0.3314550878355983	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015072	Chromosome_6A	5333	5	121	33.45209075567223	0.8110374177233645	1.2121212121212122	112	0	0.936768149882904	17	0	1.2413108242303872	95	0	0.6802721088435374	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015073	Chromosome_6A	477	1	13	48.63731656184486	0.4697727272727273	0.975609756097561	13	0	0.975609756097561	13	0	NA	NA	NA	0.537345513164965	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015074	Chromosome_6A	702	2	11	35.32763532763533	0.5130215253786872	0.43478260869565216	11	0	0.4098360655737705	9	0	0.49504950495049505	2	0	0.26001040041601664	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015075	Chromosome_6A	1009	3	43	39.44499504459861	1.0983772562719931	0.2704530087897228	43	0	0.24429967426710097	37	0	0.398406374501992	6	0	0.42569659442724456	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015076	Chromosome_6A	8168	6	186	35.39422135161606	0.728415755376643	4.286710037174721	183	0.02185792349726776	0.5328596802841918	25	0	4.851643945469126	158	0.02531645569620253	0.5899705014749262	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015077	Chromosome_6A	315	1	15	43.17460317460318	1.0238353196099674	0.5357142857142857	15	0	0.5357142857142857	15	0	NA	NA	NA	0.4409857328145266	66	0	unmethylated (<10%)	Q6PAL0	BEN domain-containing protein 3	DNA methylation-dependent constitutive heterochromatin formation [GO:0006346]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of ATP metabolic process [GO:1903580]; protein homooligomerization [GO:0051260]; rDNA heterochromatin formation [GO:0000183]	hit with GO BP
GN015078	Chromosome_6A	590	2	7	37.45762711864407	0.34595409616351147	NA	0	NA	NA	NA	NA	NA	NA	NA	2.2222222222222223	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015079	Chromosome_6A	558	1	14	38.53046594982079	0.6777719937532535	0.9082652134423251	14	0	0.9082652134423251	14	0	NA	NA	NA	0.513736877373241	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015080	Chromosome_6A	2273	4	22	36.823581170259565	0.2864983786137434	3.9408866995073892	11	0	4.615384615384615	7	0	2.73972602739726	4	0	2.5390625	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015081	Chromosome_6A	342	1	18	50.292397660818715	0.8333558954920807	10.16042780748663	9	0	10.16042780748663	9	0	NA	NA	NA	2.2787807043503996	57	0	sparse (10-50%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN015082	Chromosome_6A	1854	1	33	40.93851132686084	0.4315764227871674	85.1738865161684	33	0.8787878787878788	85.1738865161684	33	0.8787878787878788	NA	NA	NA	75.2411575562701	12	0.9166666666666666	methylated (>=50%)	Q8BZM1	Glomulin (FK506-binding protein-associated protein) (FAP) (FKBP-associated protein)	cell surface receptor signaling pathway [GO:0007166]; circulatory system development [GO:0072359]; epigenetic regulation of gene expression [GO:0040029]; muscle cell differentiation [GO:0042692]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of T cell proliferation [GO:0042130]; neural tube closure [GO:0001843]; positive regulation of cytokine production [GO:0001819]; positive regulation of interleukin-2 production [GO:0032743]; positive regulation of phosphorylation [GO:0042327]; regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032434]; vasculogenesis [GO:0001570]	hit with GO BP
GN015083	Chromosome_6A	2016	1	49	40.2281746031746	0.6013367909711823	0.9850275807722616	47	0	0.9850275807722616	47	0	NA	NA	NA	0.5671077504725898	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015084	Chromosome_6A	792	1	28	44.44444444444444	0.7162790697674418	1.5625	11	0	1.5625	11	0	NA	NA	NA	3.257328990228013	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015085	Chromosome_6A	288	1	4	44.791666666666664	0.2773230621088108	0	4	0	0	4	0	NA	NA	NA	0.9630818619582665	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001828	Chromosome_6A	539	1	18	42.67161410018553	0.7336660617059891	1.75	18	0	1.75	18	0	NA	NA	NA	0.6901561932437341	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015086	Chromosome_6A	381	1	2	41.46981627296588	0.12258687258687259	0.7936507936507936	2	0	0.7936507936507936	2	0	NA	NA	NA	1.9498607242339834	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015087	Chromosome_6A	1249	2	89	63.89111289031225	0.6993677058101859	40.625	3	0.3333333333333333	NA	NA	NA	40.625	3	0.3333333333333333	6	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015088	Chromosome_6A	1420	2	28	36.76056338028169	0.5837444209537233	43.97163120567376	6	0.5	43.373493975903614	2	0.5	44.827586206896555	4	0.5	20.417633410672853	16	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001349	Chromosome_6A	1077	1	14	37.697307335190345	0.3758225324027916	NA	0	NA	NA	NA	NA	NA	NA	NA	2.34375	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015089	Chromosome_6A	183	1	3	42.076502732240435	0.4420289855072464	NA	0	NA	NA	NA	NA	NA	NA	NA	0	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015090	Chromosome_6A	4504	7	55	37.94404973357016	0.34364604401976534	3.864734299516908	9	0	NA	NA	NA	3.864734299516908	9	0	0.9615384615384616	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015091	Chromosome_6A	288	1	10	47.916666666666664	0.6049149338374291	0.5376344086021505	10	0	0.5376344086021505	10	0	NA	NA	NA	0.6963042313872523	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015092	Chromosome_6A	1677	1	37	41.741204531902206	0.5067251390352059	10.583153347732182	19	0.05263157894736842	10.583153347732182	19	0.05263157894736842	NA	NA	NA	2.7876631079478056	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015093	Chromosome_6A	603	1	10	42.78606965174129	0.36552100381887614	1.0101010101010102	8	0	1.0101010101010102	8	0	NA	NA	NA	8.51063829787234	29	0.034482758620689655	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015094	Chromosome_6A	6331	8	37	32.885800031590584	0.21680864691160573	30.765845070422536	34	0.029411764705882353	28.432185815014517	26	0.038461538461538464	36.409227683049146	8	0	2.054292002934703	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015095	Chromosome_6A	258	1	5	43.02325581395349	0.41883116883116883	0	5	0	0	5	0	NA	NA	NA	0.7697044334975369	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015096	Chromosome_6A	288	1	4	43.40277777777778	0.29493087557603687	0.6535947712418301	4	0	0.6535947712418301	4	0	NA	NA	NA	0.4387990762124711	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015097	Chromosome_6A	546	1	12	38.095238095238095	0.6066666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6737247353224254	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015098	Chromosome_6A	546	1	12	38.095238095238095	0.6066666666666667	0	3	0	0	3	0	NA	NA	NA	0.6772009029345373	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015099	Chromosome_6A	546	1	12	38.095238095238095	0.6066666666666667	0.49504950495049505	5	0	0.49504950495049505	5	0	NA	NA	NA	1.4563106796116505	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015100	Chromosome_6A	546	1	12	37.91208791208791	0.6123364485981309	0	10	0	0	10	0	NA	NA	NA	0.2785515320334262	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015101	Chromosome_6A	546	1	12	38.095238095238095	0.6066666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	0.26109660574412535	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015102	Chromosome_6A	546	1	12	38.27838827838828	0.6006600660066007	0	8	0	0	8	0	NA	NA	NA	1.36986301369863	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015103	Chromosome_6A	546	1	12	38.095238095238095	0.6066666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	2.3640661938534278	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015104	Chromosome_6A	297	1	16	44.78114478114478	1.1647058823529413	1.5792798483891346	16	0	1.5792798483891346	16	0	NA	NA	NA	0.44173327724021877	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015105	Chromosome_6A	2976	4	80	36.29032258064516	0.8166401404972284	0.4146796599626788	80	0	0.46801872074882994	22	0	0.39536853996046317	58	0	0.9395973154362416	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015106	Chromosome_6A	575	2	13	36.52173913043478	0.6802256802256802	0.17699115044247787	13	0	0.21505376344086022	12	0	0	1	0	0.2478929102627665	34	0	unmethylated (<10%)	B0BN95	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN015107	Chromosome_6A	210	1	6	41.904761904761905	0.6792452830188679	0.3460207612456747	6	0	0.3460207612456747	6	0	NA	NA	NA	0.4468560485157996	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015108	Chromosome_6A	784	2	12	36.607142857142854	0.4603640634174985	1.037037037037037	12	0	0.7974481658692185	11	0	4.166666666666667	1	0	0.4793863854266539	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015109	Chromosome_6A	2272	2	14	34.727112676056336	0.2045267489711934	1.1523687580025608	14	0	1.4388489208633093	7	0	0.8241758241758241	7	0	1.06312292358804	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015110	Chromosome_6A	4663	8	53	36.221316748874116	0.3476306890750629	56.87056737588652	49	0.5918367346938775	59.57562568008705	42	0.6190476190476191	44.97607655502392	7	0.42857142857142855	83.93506856982927	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015111	Chromosome_6A	17604	8	400	35.57146103158373	0.7183113074049229	1.3206835211039836	391	0	0.5498821681068342	29	0	1.3774742447042483	362	0	0.8833100883310089	50	0	unmethylated (<10%)	Q24372	Lachesin	cell adhesion involved in heart morphogenesis [GO:0061343]; homophilic cell-cell adhesion [GO:0007156]; maintenance of epithelial integrity, open tracheal system [GO:0035160]; morphogenesis of embryonic epithelium [GO:0016331]; open tracheal system development [GO:0007424]; regulation of tube size, open tracheal system [GO:0035151]; septate junction assembly [GO:0019991]	hit with GO BP
GN015112	Chromosome_6A	11081	11	257	36.19709412507896	0.7122818996738499	1.6036906854130053	254	0	0.7220216606498195	43	0	1.7258629314657328	211	0	0.5278785879247773	52	0	unmethylated (<10%)	O75351	Vacuolar protein sorting-associated protein 4B (EC 3.6.4.6) (Cell migration-inducing gene 1 protein) (Suppressor of K(+) transport growth defect 1) (Protein SKD1)	autophagosome maturation [GO:0097352]; autophagy [GO:0006914]; endosomal transport [GO:0016197]; endosome to lysosome transport via multivesicular body sorting pathway [GO:0032510]; ESCRT III complex disassembly [GO:1904903]; late endosomal microautophagy [GO:0061738]; late endosome to lysosome transport via multivesicular body sorting pathway [GO:0061764]; macroautophagy [GO:0016236]; membrane fission [GO:0090148]; midbody abscission [GO:0061952]; mitotic metaphase chromosome alignment [GO:0007080]; multivesicular body assembly [GO:0036258]; multivesicular body sorting pathway [GO:0071985]; negative regulation of exosomal secretion [GO:1903542]; nuclear membrane reassembly [GO:0031468]; nucleus organization [GO:0006997]; plasma membrane repair [GO:0001778]; positive regulation of centriole elongation [GO:1903724]; positive regulation of exosomal secretion [GO:1903543]; positive regulation of G2/M transition of mitotic cell cycle [GO:0010971]; protein depolymerization [GO:0051261]; regulation of centrosome duplication [GO:0010824]; regulation of mitotic spindle assembly [GO:1901673]; response to lipid [GO:0033993]; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043162]; ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway [GO:0090611]; viral budding from plasma membrane [GO:0046761]; viral budding via host ESCRT complex [GO:0039702]	hit with GO BP
GN015113	Chromosome_6A	1083	2	26	37.85780240073869	0.6702849389416553	0.4694835680751174	26	0	0.6329113924050633	11	0	0.338409475465313	15	0	0.45558086560364464	45	0	unmethylated (<10%)	P22031	D-galactoside-specific lectin (Sea urchin egg lectin) (SUEL)	NA	hit, no GO BP
GN015114	Chromosome_6A	171	1	0	44.44444444444444	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0898158586997369	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015115	Chromosome_6A	483	1	17	40.78674948240165	0.8489454094292804	0.6711409395973155	17	0	0.6711409395973155	17	0	NA	NA	NA	0.4854368932038835	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015116	Chromosome_6A	2990	3	24	35.25083612040134	0.26614347863174953	17.67411300919842	16	0	14.53287197231834	13	0	21.83206106870229	3	0	15.27655838454785	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015117	Chromosome_6A	489	1	23	41.30879345603272	1.1134541134541134	0.5050505050505051	23	0	0.5050505050505051	23	0	NA	NA	NA	0.31007751937984496	56	0	unmethylated (<10%)	P70031	Cholecystokinin receptor (CCK-XLR)	neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN015118	Chromosome_6A	234	1	11	47.00854700854701	0.853448275862069	0.7272727272727273	11	0	0.7272727272727273	11	0	NA	NA	NA	0.6949270326615705	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015119	Chromosome_6A	1294	3	20	37.403400309119014	0.4441012441012441	NA	0	NA	NA	NA	NA	NA	NA	NA	1.154480483782298	33	0	NA	P38766	ATP-dependent DNA helicase RRM3 (EC 5.6.2.3) (DNA 5'-3' helicase RRM3) (Regulation of Ty1 transposition protein 104) (rDNA recombination mutation protein 3)	DNA repair [GO:0006281]; DNA replication [GO:0006260]; replication fork progression beyond termination site [GO:0097046]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN015120	Chromosome_6A	654	2	2	33.18042813455658	0.11312921639854696	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015121	Chromosome_6A	1296	1	11	36.80555555555556	0.25102127060149315	NA	0	NA	NA	NA	NA	NA	NA	NA	0	2	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015122	Chromosome_6A	828	1	14	37.56038647342995	0.47964250248262164	NA	0	NA	NA	NA	NA	NA	NA	NA	1.8998272884283247	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015123	Chromosome_6A	3645	3	108	38.76543209876543	0.789052759860654	2.8470171293561726	104	0	4.184457728437233	13	0	2.6323005209761448	91	0	0.37907505686125853	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015124	Chromosome_6A	282	1	14	47.5177304964539	0.8891891891891892	0.8547008547008547	14	0	0.8547008547008547	14	0	NA	NA	NA	0.836382645060115	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015125	Chromosome_6A	1578	2	18	31.49556400506971	0.49102790166995125	5.448717948717949	18	0	6.319702602230484	12	0	4.271356783919598	6	0	7.4099407204742365	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015126	Chromosome_6A	210	1	10	45.23809523809524	0.9358288770053476	0	10	0	0	10	0	NA	NA	NA	0.5239520958083832	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015127	Chromosome_6A	1277	5	29	36.25685199686766	0.6988413345410628	0.16483516483516483	29	0	0.15479876160990713	22	0	0.1893939393939394	7	0	1.1870295309785757	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015128	Chromosome_6A	594	2	16	38.38383838383838	0.7315270935960592	0.13513513513513514	16	0	0.13513513513513514	16	0	NA	NA	NA	0.9166666666666666	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015129	Chromosome_6A	378	1	12	38.35978835978836	0.8814613291877186	0.4838709677419355	12	0	0.4838709677419355	12	0	NA	NA	NA	0.22793203481143803	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015130	Chromosome_6A	3591	1	98	37.538290169869114	0.774967133296778	0.5267535347934572	98	0	0.5267535347934572	98	0	NA	NA	NA	0.43816942551119764	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015131	Chromosome_6A	4108	6	100	36.830574488802334	0.7214231775635285	0.6630500301386377	100	0	0.8956796628029505	44	0	0.5196492367651835	56	0	0.45163718479488146	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015132	Chromosome_6A	2090	4	65	35.07177033492823	1.0115262617086864	0.5768748432405317	65	0	0.6295907660020986	15	0	0.5603164139749506	50	0	0.315955766192733	28	0	unmethylated (<10%)	Q5FPE5	Glucose 1-dehydrogenase (EC 1.1.1.119)	NA	hit, no GO BP
GN015133	Chromosome_6A	11364	5	216	35.20767335445266	0.6156201360440485	20.729522879009934	206	0.17475728155339806	10	20	0.1	21.785011625827224	186	0.1827956989247312	8.80153813287759	62	0	sparse (10-50%)	Q21929	L-xylulose reductase (XR) (EC 1.1.1.10) (Dicarbonyl/L-xylulose reductase) (DCXR) (Short-chain dehydrogenase 21)	glucose metabolic process [GO:0006006]; xylulose catabolic process [GO:0005998]; xylulose metabolic process [GO:0005997]	hit with GO BP
GN015134	Chromosome_6A	432	2	12	46.06481481481482	0.5295199182839633	0	6	0	0	6	0	NA	NA	NA	0	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015135	Chromosome_6A	6187	7	158	34.03911427186035	0.8837732403343264	0.6298252742787485	156	0	0.46146746654360865	37	0	0.6773479223655073	119	0	0.43243243243243246	60	0	unmethylated (<10%)	Q9Y466	Nuclear receptor subfamily 2 group E member 1 (Nuclear receptor TLX) (Protein tailless homolog) (Tll) (hTll)	cell differentiation [GO:0030154]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; positive regulation of neural precursor cell proliferation [GO:2000179]; positive regulation of stem cell proliferation [GO:2000648]	hit with GO BP
GN015136	Chromosome_6A	4383	4	116	42.11727127538216	0.5977054734532989	0.872093023255814	89	0	0.54421768707483	18	0	0.9611829944547134	71	0	0.4557291666666667	20	0	unmethylated (<10%)	Q9YGL3	Nuclear receptor subfamily 2 group E member 1 (Nuclear receptor TLX) (Protein tailless homolog) (Tll)	cell differentiation [GO:0030154]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]	hit with GO BP
GN015137	Chromosome_6A	1572	1	49	37.849872773536894	0.8708648954211419	0.9141696292534282	49	0	0.9141696292534282	49	0	NA	NA	NA	0.6810897435897436	52	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015138	Chromosome_6A	426	1	15	42.48826291079812	0.7830882352941176	0.37037037037037035	15	0	0.37037037037037035	15	0	NA	NA	NA	0.681265206812652	52	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015139	Chromosome_6A	2322	1	62	35.9603789836348	0.8270655958084865	0	18	0	0	18	0	NA	NA	NA	0.8443908323281062	48	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015140	Chromosome_6A	567	1	24	41.7989417989418	0.9711675706537254	0.12062726176115803	24	0	0.12062726176115803	24	0	NA	NA	NA	0.49786628733997157	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015141	Chromosome_6A	426	1	16	41.31455399061033	0.8941361668634396	0.4431314623338257	16	0	0.4431314623338257	16	0	NA	NA	NA	0.8149010477299186	61	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015142	Chromosome_6A	1959	5	14	33.2312404287902	0.26524177949709865	2.5337837837837838	13	0	4.040404040404041	6	0	1.0169491525423728	7	0	0.8982035928143712	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015143	Chromosome_6A	243	1	0	47.73662551440329	0	NA	0	NA	NA	NA	NA	NA	NA	NA	1.007838745800672	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015144	Chromosome_6A	657	1	23	49.923896499238964	0.5625837676842889	6.896551724137931	14	0	6.896551724137931	14	0	NA	NA	NA	0.5443658138268916	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015145	Chromosome_6A	279	1	9	50.53763440860215	0.5054347826086957	0.704225352112676	7	0	0.704225352112676	7	0	NA	NA	NA	0.48717948717948717	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015146	Chromosome_6A	339	1	15	41.88790560471976	1.0626959247648904	89.47368421052632	14	1	89.47368421052632	14	1	NA	NA	NA	67.86953504510757	53	0.9056603773584906	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015147	Chromosome_6A	153	1	9	49.01960784313726	1.0007267441860466	1.0526315789473684	9	0	1.0526315789473684	9	0	NA	NA	NA	0.8067614291202458	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015148	Chromosome_6A	12206	4	435	37.17024414222514	1.0318233015640559	1.8486309198429658	424	0	1.5586255756287637	119	0	1.8959537572254335	305	0	0.7625272331154684	67	0	unmethylated (<10%)	Q0P5V2	Sine oculis-binding protein homolog (Jackson circler protein 1)	animal organ development [GO:0048513]; cochlea development [GO:0090102]; cognition [GO:0050890]; inner ear morphogenesis [GO:0042472]; locomotory behavior [GO:0007626]; sensory perception of sound [GO:0007605]	hit with GO BP
GN015149	Chromosome_6A	20312	14	505	35.74241827491138	0.7788379630926736	1.0979441941468215	501	0	0.7971014492753623	44	0	1.1330486619033526	457	0	1.1246200607902737	58	0	unmethylated (<10%)	P24463	Cytochrome P450 3A12 (EC 1.14.14.1) (CYPIIIA12) (Cytochrome P450-PBD-1)	hormone metabolic process [GO:0042445]; oxidative demethylation [GO:0070989]; progesterone metabolic process [GO:0042448]; steroid metabolic process [GO:0008202]	hit with GO BP
GN015150	Chromosome_6A	15714	4	398	36.13338424334988	0.7759641840465953	0.8952899961074348	398	0	1.4256619144602851	44	0	0.8302640614270553	354	0	0.5193578847969783	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015151	Chromosome_6A	1732	3	52	36.95150115473441	0.8807698325770615	0.46059365404298874	52	0	0.2560819462227913	15	0	0.5967604433077579	37	0	1.0729613733905579	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015152	Chromosome_6A	1995	1	20	40.6015037593985	0.2435064935064935	25.131995776135163	20	0.05	25.131995776135163	20	0.05	NA	NA	NA	39.01673640167364	15	0.26666666666666666	sparse (10-50%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN015153	Chromosome_6A	273	1	0	46.15384615384615	0	NA	0	NA	NA	NA	NA	NA	NA	NA	63.08617234468938	39	0.9230769230769231	NA	NA	NA	NA	no Swiss-Prot hit
GN015154	Chromosome_6A	1875	2	39	41.28	0.49120367571489026	79.14723517654896	39	0.9743589743589743	80.52039381153305	38	0.9736842105263158	54.43037974683544	1	1	62.42774566473989	8	0.625	methylated (>=50%)	Q21920	Ankyrin repeat and KH domain-containing protein mask-1 (Multiple ankyrin repeats single KH domain homolog)	NA	hit, no GO BP
GN015155	Chromosome_6A	189	1	5	47.08994708994709	0.47775530839231545	76.03305785123968	5	1	76.03305785123968	5	1	NA	NA	NA	78.73376623376623	33	0.9393939393939394	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015156	Chromosome_6A	375	1	8	41.6	0.4943968358602505	62.4	8	0.875	62.4	8	0.875	NA	NA	NA	68.21639898562975	28	0.7857142857142857	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015157	Chromosome_6A	35624	21	620	37.25297552211992	0.5031859885941763	93.52853412905633	611	0.9918166939443536	96.23806850084222	131	1	93.07881084775248	480	0.9895833333333334	93.6742934051144	29	1	methylated (>=50%)	Q9GZR1	Sentrin-specific protease 6 (EC 3.4.22.-) (SUMO-1-specific protease 1) (Sentrin/SUMO-specific protease SENP6)	protein desumoylation [GO:0016926]; protein modification by small protein removal [GO:0070646]; protein sumoylation [GO:0016925]; proteolysis [GO:0006508]; regulation of kinetochore assembly [GO:0090234]; regulation of spindle assembly [GO:0090169]	hit with GO BP
GN015158	Chromosome_6A	375	1	9	40.53333333333333	0.5926251097453907	0.7772020725388601	9	0	0.7772020725388601	9	0	NA	NA	NA	0.4948268106162843	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015159	Chromosome_6A	1005	1	38	41.691542288557216	0.8707250341997264	0.25929127052722556	38	0	0.25929127052722556	38	0	NA	NA	NA	0.8083529808016167	46	0	unmethylated (<10%)	Q08174	Protocadherin-1 (Cadherin-like protein 1) (Protocadherin-42) (PC42)	cell adhesion [GO:0007155]; cell-cell signaling [GO:0007267]; homophilic cell-cell adhesion [GO:0007156]; nervous system development [GO:0007399]	hit with GO BP
GN015160	Chromosome_6A	1194	1	30	40.28475711892797	0.6197446278417938	0.7073386383731212	30	0	0.7073386383731212	30	0	NA	NA	NA	0.4528301886792453	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015161	Chromosome_6A	1200	1	31	40.5	0.6301560144326055	0.9330406147091108	31	0	0.9330406147091108	31	0	NA	NA	NA	1.4414802065404475	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015162	Chromosome_6A	606	1	16	40.759075907590756	0.6357199055861527	0.4282655246252677	16	0	0.4282655246252677	16	0	NA	NA	NA	0.45129748025573524	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015163	Chromosome_6A	1200	1	34	40.583333333333336	0.6886075949367089	0.800640512409928	34	0	0.800640512409928	34	0	NA	NA	NA	0.46395431834404	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015164	Chromosome_6A	519	1	14	41.42581888246628	0.6290909090909091	1.3262599469496021	14	0	1.3262599469496021	14	0	NA	NA	NA	0.49770290964777947	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015165	Chromosome_6A	6143	6	121	36.08985837538662	0.6051221473974887	87.29743857814951	121	0.859504132231405	54.74189675870348	23	0.43478260869565216	91.2743804076844	98	0.9591836734693877	63.701725554642564	67	0.5373134328358209	methylated (>=50%)	Q13162	Peroxiredoxin-4 (EC 1.11.1.24) (Antioxidant enzyme AOE372) (AOE37-2) (Peroxiredoxin IV) (Prx-IV) (Thioredoxin peroxidase AO372) (Thioredoxin-dependent peroxide reductase A0372) (Thioredoxin-dependent peroxiredoxin 4)	hydrogen peroxide catabolic process [GO:0042744]; I-kappaB phosphorylation [GO:0007252]; response to oxidative stress [GO:0006979]	hit with GO BP
GN015166	Chromosome_6A	26477	7	350	35.77066888242626	0.4198825210667348	68.26448611306922	344	0.7790697674418605	87.14241771762535	56	0.9464285714285714	64.8602174395385	288	0.7465277777777778	76.95067264573991	16	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015167	Chromosome_6A	1641	2	50	39.853747714808044	0.7821436742164265	0.6711409395973155	48	0	0.8830022075055187	38	0	0.48496605237633367	10	0	0.2284843869002285	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015168	Chromosome_6A	27651	16	639	36.34226610249177	0.6999363564180032	0.6245722108145106	624	0	0.38378107792424493	93	0	0.6742114134360703	531	0	0.5374899220639613	46	0	unmethylated (<10%)	Q9UGM3	Scavenger receptor cysteine-rich domain-containing protein DMBT1 (Deleted in malignant brain tumors 1 protein) (Glycoprotein 340) (Gp-340) (Hensin) (Salivary agglutinin) (SAG) (Surfactant pulmonary-associated D-binding protein)	defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; epithelial cell differentiation [GO:0030855]; induction of bacterial agglutination [GO:0043152]; innate immune response [GO:0045087]	hit with GO BP
GN015169	Chromosome_6A	1255	3	11	32.50996015936255	0.33185096153846155	1.1971830985915493	11	0	1.6722408026755853	8	0	0.3824091778202677	3	0	0.504266873545384	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015170	Chromosome_6A	189	1	6	55.026455026455025	0.42954545454545456	NA	0	NA	NA	NA	NA	NA	NA	NA	0.21621621621621623	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015171	Chromosome_6A	1185	1	28	38.734177215189874	0.6360708534621579	0.7560137457044673	28	0	0.7560137457044673	28	0	NA	NA	NA	0.5374738727978501	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015172	Chromosome_6A	382	2	14	44.50261780104712	0.7418504646969066	2.127659574468085	13	0	2.15311004784689	12	0	1.9230769230769231	1	0	3.2359333494325044	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015173	Chromosome_6A	438	2	11	43.37899543378995	0.5359884303037046	0	2	0	0	2	0	NA	NA	NA	1.7521090201168072	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015174	Chromosome_6A	1336	2	52	43.787425149700596	0.8859416445623343	0.5460750853242321	50	0	0.5714285714285714	43	0	0.5084745762711864	7	0	0.41297935103244837	71	0	unmethylated (<10%)	P86787	Gigasin-4	NA	hit, no GO BP
GN015175	Chromosome_6A	837	1	34	40.74074074074074	0.9808368373888467	0.6386861313868614	34	0	0.6386861313868614	34	0	NA	NA	NA	0.5334755934915978	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015176	Chromosome_6A	1504	2	40	37.101063829787236	0.7736625514403292	0.563473649320517	40	0	0.87527352297593	12	0	0.5078125	28	0	0.4161712247324614	51	0	unmethylated (<10%)	P86787	Gigasin-4	NA	hit, no GO BP
GN015177	Chromosome_6A	192	1	8	41.666666666666664	1.024	0.5235602094240838	8	0	0.5235602094240838	8	0	NA	NA	NA	0.36859565057132326	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015178	Chromosome_6A	1078	2	46	38.5899814471243	1.1478703703703703	0.29691211401425177	46	0	0.3333333333333333	44	0	0	2	0	0.6480558325024925	37	0	unmethylated (<10%)	Q98234	Glutathione peroxidase (GPx) (GSHPx) (EC 1.11.1.9)	response to oxidative stress [GO:0006979]	hit with GO BP
GN015179	Chromosome_6A	2600	2	77	35	0.9727891156462585	0.7086813464945584	77	0	0.35688793718772305	35	0	0.9019607843137255	42	0	0.5871559633027523	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015180	Chromosome_6A	6844	5	184	34.96493278784337	0.8845843149981526	0.8498335377606449	183	0	0.914435009797518	27	0	0.83982596377618135	156	0	0.8865903213889915	60	0	unmethylated (<10%)	Q8N6F8	Methyltransferase-like protein 27 (Williams-Beuren syndrome chromosomal region 27 protein)	NA	hit, no GO BP
GN015181	Chromosome_6A	1172	2	33	36.43344709897611	0.8487162606978275	0.7357102433503112	33	0	0.6006006006006006	17	0	0.8174386920980926	16	0	0.5751848808545604	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015182	Chromosome_6A	15903	6	275	35.20090548953028	0.5623900508209538	87.45651333591032	270	0.9444444444444444	60.81730769230769	19	0.631578947368421	89.16598107774578	251	0.9681274900398407	43.37842088707141	52	0.4230769230769231	methylated (>=50%)	P35282	Ras-related protein Rab-21 (EC 3.6.5.2) (Rab-12)	anterograde axonal transport [GO:0008089]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of receptor-mediated endocytosis [GO:0048260]; protein stabilization [GO:0050821]; Rab protein signal transduction [GO:0032482]; regulation of axon extension [GO:0030516]; regulation of exocytosis [GO:0017157]	hit with GO BP
GN015183	Chromosome_6A	16769	15	285	36.01884429602242	0.5275659418101278	85.8907546805636	265	0.8981132075471698	94.61678832116789	45	1	84.45809302673958	220	0.8772727272727273	56.7351598173516	56	0.5535714285714286	methylated (>=50%)	Q9CXF4	TBC1 domain family member 15 (GTPase-activating protein RAB7) (GAP for RAB7) (Rab7-GAP)	regulation of GTPase activity [GO:0043087]	hit with GO BP
GN015184	Chromosome_6A	19009	7	255	34.0733336840444	0.4625661075240907	42.28384019081693	253	0.42292490118577075	51.95424213536702	23	0.5217391304347826	41.63857260988487	230	0.41304347826086957	1.0859301227573182	42	0	sparse (10-50%)	Q9JHG6	Calcipressin-1 (Down syndrome critical region protein 1 homolog) (Myocyte-enriched calcineurin-interacting protein 1) (MCIP1) (Regulator of calcineurin 1)	calcineurin-NFAT signaling cascade [GO:0033173]; calcium-mediated signaling [GO:0019722]; locomotion involved in locomotory behavior [GO:0031987]; negative regulation of calcineurin-NFAT signaling cascade [GO:0070885]; negative regulation of smooth muscle cell differentiation [GO:0051151]; response to estrogen [GO:0043627]; response to ischemia [GO:0002931]; response to mechanical stimulus [GO:0009612]; response to oxidative stress [GO:0006979]; response to stress [GO:0006950]; short-term memory [GO:0007614]; skeletal muscle fiber development [GO:0048741]	hit with GO BP
GN015185	Chromosome_6A	23722	9	399	36.409240367591266	0.5104079768155356	80.19514983261207	396	0.8888888888888888	73.76074025115665	31	0.7741935483870968	80.61877202906749	365	0.8986301369863013	0.7720438845997561	55	0	methylated (>=50%)	Q4QR85	Methylosome protein WDR77 (Methylosome protein 50) (MEP-50) (WD repeat-containing protein 77)	negative regulation of cell population proliferation [GO:0008285]; negative regulation of epithelial cell proliferation involved in prostate gland development [GO:0060770]; positive regulation of cell population proliferation [GO:0008284]; protein polyubiquitination [GO:0000209]; regulation of transcription by RNA polymerase II [GO:0006357]; secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development [GO:0060528]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN015186	Chromosome_6A	14280	7	389	38.207282913165265	0.7476455890832212	0.8000901510029299	389	0	0.7783543365455893	55	0	0.8039867109634552	334	0	0.3364737550471063	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015187	Chromosome_6A	540	1	27	43.888888888888886	1.0414285714285714	0.40816326530612246	27	0	0.40816326530612246	27	0	NA	NA	NA	1.0309278350515463	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015188	Chromosome_6A	321	1	13	43.30218068535826	0.8770491803278688	0.5277044854881267	13	0	0.5277044854881267	13	0	NA	NA	NA	0.8740204942736588	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015189	Chromosome_6A	933	2	27	35.262593783494104	0.9347309833024119	0.41695621959694235	27	0	0.3937007874015748	25	0	0.591715976331361	2	0	0.5548302872062664	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015190	Chromosome_6A	1015	2	34	36.748768472906406	1.0020325203252032	0.5353319057815846	34	0	0.5821474773609314	30	0	0.3105590062111801	4	0	1.0271041369472182	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015191	Chromosome_6A	3485	6	57	35.38020086083214	0.5286176559813934	2.149137088896125	57	0	2.7747551686615886	32	0	1.2165450121654502	25	0	0.6014561570117126	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015192	Chromosome_6A	1122	1	27	41.0873440285205	0.5703151474076584	0.5470459518599562	27	0	0.5470459518599562	27	0	NA	NA	NA	0.5813953488372093	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015193	Chromosome_6A	501	1	22	44.510978043912175	0.8880116016757976	0.9861932938856016	22	0	0.9861932938856016	22	0	NA	NA	NA	0.6659267480577137	51	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015194	Chromosome_6A	22783	6	258	33.24408550234824	0.4137286640432005	79.83755648344106	256	0.91796875	69.88888888888889	17	0.8235294117647058	80.37749502502562	239	0.9246861924686193	47.17708620214817	55	0.4	methylated (>=50%)	P62070	Ras-related protein R-Ras2 (EC 3.6.5.2) (Ras-like protein TC21) (Teratocarcinoma oncogene)	establishment or maintenance of cell polarity [GO:0007163]; osteoblast differentiation [GO:0001649]; Ras protein signal transduction [GO:0007265]	hit with GO BP
GN015195	Chromosome_6A	26306	18	481	35.976583288983505	0.566465840548097	91.75796499181463	472	0.9915254237288136	89.73153047227122	95	1	92.14583098908518	377	0.9893899204244032	80.28001898433791	58	0.7241379310344828	methylated (>=50%)	Q9WU62	Inner centromere protein	chromosome segregation [GO:0007059]; meiotic spindle midzone assembly [GO:0051257]; metaphase chromosome alignment [GO:0051310]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; mitotic spindle midzone assembly [GO:0051256]; mitotic spindle organization [GO:0007052]; positive regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902425]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of mitotic cytokinesis [GO:1903490]; positive regulation of mitotic sister chromatid separation [GO:1901970]; positive regulation of protein phosphorylation [GO:0001934]	hit with GO BP
GN015196	Chromosome_6A	787	4	25	41.16899618805591	0.7531677066186885	0.7237635705669482	25	0	0.76103500761035	20	0	0.5813953488372093	5	0	0.4209049456331112	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015197	Chromosome_6A	231	1	3	40.25974025974026	0.3268867924528302	0.6024096385542169	3	0	0.6024096385542169	3	0	NA	NA	NA	0.6305170239596469	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015198	Chromosome_6A	2481	3	50	40.34663442160419	0.5041084534172092	0.9990485252140818	50	0	0.8516678495386799	40	0	1.2987012987012987	10	0	1.4785430941218896	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015199	Chromosome_6A	2478	3	48	35.63357546408394	0.6119462880074086	1.4331210191082802	48	0	0.45941807044410415	14	0	1.7751479289940828	34	0	1.8493150684931507	26	0	unmethylated (<10%)	Q9WU62	Inner centromere protein	chromosome segregation [GO:0007059]; meiotic spindle midzone assembly [GO:0051257]; metaphase chromosome alignment [GO:0051310]; mitotic cell cycle [GO:0000278]; mitotic cytokinesis [GO:0000281]; mitotic spindle midzone assembly [GO:0051256]; mitotic spindle organization [GO:0007052]; positive regulation of attachment of mitotic spindle microtubules to kinetochore [GO:1902425]; positive regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090267]; positive regulation of mitotic cytokinesis [GO:1903490]; positive regulation of mitotic sister chromatid separation [GO:1901970]; positive regulation of protein phosphorylation [GO:0001934]	hit with GO BP
GN015200	Chromosome_6A	204	1	6	45.588235294117645	0.9066666666666666	0	6	0	0	6	0	NA	NA	NA	0.9320175438596491	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015201	Chromosome_6A	6977	6	109	36.720653576035545	0.4635352000472987	88.42180263626648	109	1	92.34629861982434	15	1	87.77247249325306	94	1	73.34200260078023	32	0.84375	methylated (>=50%)	Q8VDH1	F-box only protein 21	apoptotic process [GO:0006915]; cytokine-mediated signaling pathway [GO:0019221]; ERK1 and ERK2 cascade [GO:0070371]; hematopoietic stem cell differentiation [GO:0060218]; hematopoietic stem cell homeostasis [GO:0061484]	hit with GO BP
GN015202	Chromosome_6A	351	1	11	62.39316239316239	1.261764705882353	NA	0	NA	NA	NA	NA	NA	NA	NA	60.56838365896981	35	0.8857142857142857	NA	NA	NA	NA	no Swiss-Prot hit
GN015203	Chromosome_6A	579	2	21	51.295336787564764	0.8345229924502402	68.10089020771514	15	1	69.08127208480565	12	1	62.96296296296296	3	1	32.074852265265925	46	0.3695652173913043	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015204	Chromosome_6A	6867	5	129	35.532255715741954	0.5951901989873254	69.9639423076923	129	0.7131782945736435	42.33947870311507	33	0.3333333333333333	76.40432784941456	96	0.84375	45.85966079148653	40	0.725	methylated (>=50%)	Q8BGT0	Osteopetrosis-associated transmembrane protein 1 (Chloride channel 7 beta subunit) (Grey-lethal protein)	osteoclast differentiation [GO:0030316]; transepithelial chloride transport [GO:0030321]	hit with GO BP
GN015205	Chromosome_6A	498	1	21	41.16465863453815	1.0104347826086957	91.56540385989993	21	1	91.56540385989993	21	1	NA	NA	NA	92.97975352112677	68	1	methylated (>=50%)	Q17RP2	Tigger transposable element-derived protein 6	NA	hit, no GO BP
GN015206	Chromosome_6A	1676	4	49	34.00954653937948	1.0151172420612848	0.6269592476489029	44	0	0.5102040816326531	13	0	0.6787330316742082	31	0	0.6239364719228587	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015207	Chromosome_6A	1047	1	39	39.0639923591213	0.9943746347165401	0.5128205128205128	39	0	0.5128205128205128	39	0	NA	NA	NA	0.792895654931811	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015208	Chromosome_6A	1200	1	46	43.5	0.8106203007518797	1.1160714285714286	44	0	1.1160714285714286	44	0	NA	NA	NA	0.6223259432127577	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015209	Chromosome_6A	10633	5	312	36.678265776356625	0.8803752380067803	1.2421689349751566	311	0	1.7050777590406596	186	0	0.612088752869166	125	0	0.7553747821034282	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015210	Chromosome_6A	7353	4	219	35.550115599075205	0.94268513352843	0.749665327978581	217	0	0.7984031936127745	34	0	0.7421150278293135	183	0	0.9551098376313276	76	0	unmethylated (<10%)	Q0VCJ7	Ras-related and estrogen-regulated growth inhibitor (EC 3.6.5.2)	establishment or maintenance of cell polarity [GO:0007163]; negative regulation of cell growth [GO:0030308]; negative regulation of cell population proliferation [GO:0008285]; Ras protein signal transduction [GO:0007265]; response to hormone [GO:0009725]	hit with GO BP
GN015211	Chromosome_6A	4745	6	48	35.61643835616438	0.3399783557860955	60.74651353568499	48	0.5833333333333334	52.96010296010296	35	0.4857142857142857	74.43438914027149	13	0.8461538461538461	64.59044368600682	19	0.7368421052631579	methylated (>=50%)	P52844	Sulfotransferase 1E1 (ST1E1) (EC 2.8.2.4) (Estrogen sulfotransferase, isoform 1) (EST-1) (Estrogen sulfotransferase, isoform 6) (EST-6) (Estrone sulfotransferase) (Sulfotransferase, estrogen-preferring)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; estrogen catabolic process [GO:0006711]; estrogen metabolic process [GO:0008210]; ethanol catabolic process [GO:0006068]; female pregnancy [GO:0007565]; positive regulation of fat cell differentiation [GO:0045600]; sulfation [GO:0051923]	hit with GO BP
GN015212	Chromosome_6A	1335	1	26	41.19850187265918	0.4595829195630586	92.2051282051282	26	1	92.2051282051282	26	1	NA	NA	NA	16.01766358892011	45	0.15555555555555556	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015213	Chromosome_6A	22973	23	361	34.967135332781965	0.5140793821466353	88.53599516031458	360	0.9666666666666667	92.56256609094113	84	1	87.4362183498604	276	0.9565217391304348	23.537414965986393	32	0.21875	methylated (>=50%)	Q61371	Intraflagellar transport protein 88 homolog (Recessive polycystic kidney disease protein Tg737) (Tetratricopeptide repeat protein 10) (TPR repeat protein 10) (TgN(Imorpk)737Rpw)	animal organ morphogenesis [GO:0009887]; anterior/posterior pattern specification [GO:0009952]; brain development [GO:0007420]; cardiac muscle cell differentiation [GO:0055007]; cardiac septum morphogenesis [GO:0060411]; cilium assembly [GO:0060271]; cilium movement [GO:0003341]; cochlea development [GO:0090102]; cytoplasmic microtubule organization [GO:0031122]; determination of left/right symmetry [GO:0007368]; dorsal/ventral pattern formation [GO:0009953]; embryonic digit morphogenesis [GO:0042733]; endothelial cell morphogenesis [GO:0001886]; epidermal stem cell homeostasis [GO:0036334]; epidermis development [GO:0008544]; eye development [GO:0001654]; forebrain development [GO:0030900]; forebrain morphogenesis [GO:0048853]; heart development [GO:0007507]; heart formation [GO:0060914]; inner ear receptor cell stereocilium organization [GO:0060122]; intracellular protein localization [GO:0008104]; intraciliary anterograde transport [GO:0035720]; intraciliary transport [GO:0042073]; kidney development [GO:0001822]; limb development [GO:0060173]; liver development [GO:0001889]; lung development [GO:0030324]; lung vasculature development [GO:0060426]; negative regulation of epithelial cell proliferation [GO:0050680]; nervous system development [GO:0007399]; neural precursor cell proliferation [GO:0061351]; non-motile cilium assembly [GO:1905515]; Notch signaling pathway [GO:0007219]; pancreas development [GO:0031016]; positive regulation of cilium assembly [GO:0045724]; positive regulation of insulin-like growth factor receptor signaling pathway [GO:0043568]; primary palate development [GO:1903929]; regulation of autophagosome assembly [GO:2000785]; regulation of cilium assembly [GO:1902017]; regulation of fat cell differentiation [GO:0045598]; regulation of feeding behavior [GO:0060259]; regulation of odontogenesis of dentin-containing tooth [GO:0042487]; regulation of protein processing [GO:0070613]; response to fluid shear stress [GO:0034405]; smoothened signaling pathway [GO:0007224]; sperm axoneme assembly [GO:0007288]; spermatid nucleus elongation [GO:0007290]; spinal cord dorsal/ventral patterning [GO:0021513]; telencephalon development [GO:0021537]	hit with GO BP
GN015214	Chromosome_6A	180	1	1	36.111111111111114	0.17374517374517376	3.4482758620689653	1	0	3.4482758620689653	1	0	NA	NA	NA	0.7421150278293135	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015215	Chromosome_6A	315	1	24	53.96825396825397	1.0476718403547671	0.18450184501845018	24	0	0.18450184501845018	24	0	NA	NA	NA	0.44596912521440824	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003153	Chromosome_6A	804	1	8	39.67661691542288	0.26449543547989146	NA	0	NA	NA	NA	NA	NA	NA	NA	94.11764705882354	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN003152	Chromosome_6A	1699	1	18	38.55208946439082	0.29001422475106686	94.11764705882354	1	1	94.11764705882354	1	1	NA	NA	NA	91.83955739972338	14	1	NA	NA	NA	NA	no Swiss-Prot hit
GN015216	Chromosome_6A	16327	6	213	33.747779751332146	0.46253133505419	87.54730203223546	212	0.9811320754716981	91.56626506024097	22	0.9545454545454546	87.24574355883682	190	0.9842105263157894	47.6710753306498	23	0.4782608695652174	methylated (>=50%)	O62640	Putative inhibitor of apoptosis	negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of cell cycle [GO:0051726]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN015217	Chromosome_6A	624	1	13	48.07692307692308	0.3692139638614537	85.50106609808103	13	0.9230769230769231	85.50106609808103	13	0.9230769230769231	NA	NA	NA	8.4251968503937	67	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015218	Chromosome_6A	6125	5	219	38.857142857142854	0.9474733690320037	2.9243854130257487	214	0	5.0368074389771404	103	0	2.015994668443852	111	0	0.41060097051138483	69	0	unmethylated (<10%)	A1L1W9	Monocarboxylate transporter 10 (MCT 10) (Solute carrier family 16 member 10)	aromatic amino acid transport [GO:0015801]; thyroid hormone transport [GO:0070327]	hit with GO BP
GN015219	Chromosome_6A	18955	7	186	36.18570298074387	0.30029410787703176	79.92938407218517	183	0.9344262295081968	85.80060422960725	24	0.9166666666666666	79.43328795098707	159	0.9371069182389937	94.55604075691411	55	0.9818181818181818	methylated (>=50%)	Q92734	Protein TFG (TRK-fused gene protein)	COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]	hit with GO BP
GN015220	Chromosome_6A	9558	5	275	36.80686336053568	0.8501421674331622	0.8116270290675727	256	0	0.6010171058714748	41	0	0.8656468635123918	215	0	0.40551500405515006	52	0	unmethylated (<10%)	Q9BDY8	Angiopoietin-1 (ANG-1)	angiogenesis [GO:0001525]; blood coagulation [GO:0007596]; negative regulation of apoptotic process [GO:0043066]; Tie signaling pathway [GO:0048014]	hit with GO BP
GN015221	Chromosome_6A	1063	2	37	40.82784571966133	0.8424039923750777	0.7593014426727411	37	0	0.7928642220019821	31	0	0.6493506493506493	6	0	0.8976660682226212	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015222	Chromosome_6A	2631	1	77	38.80653743823641	0.7774166314900802	0.6873879258816498	77	0	0.6873879258816498	77	0	NA	NA	NA	0.9553158705701078	53	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN015223	Chromosome_6A	15954	4	465	35.627428857966656	0.9266072028106189	0.7270356999598877	448	0	0.8391608391608392	29	0	0.7183752835691909	419	0	0.6872852233676976	49	0	unmethylated (<10%)	Q6P0U3	Ras-like protein family member 11B (EC 3.6.5.2)	mesendoderm development [GO:0048382]	hit with GO BP
GN015224	Chromosome_6A	324	1	11	43.20987654320987	0.7297297297297297	0.7272727272727273	11	0	0.7272727272727273	11	0	NA	NA	NA	1.2434241989478718	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015225	Chromosome_6A	2354	4	64	35.896346644010194	0.8478395443852915	0.6933976484775399	64	0	0.7125890736342043	44	0	0.6600660066006601	20	0	0.7407407407407407	44	0	unmethylated (<10%)	O62640	Putative inhibitor of apoptosis	negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of cell cycle [GO:0051726]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN015226	Chromosome_6A	353	2	7	42.77620396600567	0.43503521126760564	0	3	0	0	3	0	NA	NA	NA	0.9225413402959095	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015227	Chromosome_6A	322	2	4	36.33540372670807	0.3770491803278688	0	4	0	0	4	0	NA	NA	NA	6.423034330011074	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015228	Chromosome_6A	804	1	67	67.03980099502488	0.7419834710743801	NA	0	NA	NA	NA	NA	NA	NA	NA	3.902439024390244	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015229	Chromosome_6A	698	2	16	38.53868194842407	0.6175624861756248	0.7345225603357818	16	0	0.702576112412178	15	0	1.0101010101010102	1	0	0.5220417633410673	40	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015230	Chromosome_6A	11476	8	136	34.63750435691879	0.3971779057422147	88.7653330276281	136	0.9779411764705882	87.96296296296296	38	1	89.04725019364834	98	0.9693877551020408	89.54451345755693	27	0.9629629629629629	methylated (>=50%)	Q6GL42	Transmembrane protein 39A	negative regulation of autophagosome assembly [GO:1902902]; negative regulation of autophagosome maturation [GO:1901097]	hit with GO BP
GN015231	Chromosome_6A	9990	10	169	39.129129129129126	0.44841278272971624	88.6339266566588	163	0.9815950920245399	92.42424242424242	17	1	88.24988190836089	146	0.9794520547945206	30.053082890975908	34	0.38235294117647056	methylated (>=50%)	Q7ZWY2	PIH1 domain-containing protein 1	box C/D snoRNP assembly [GO:0000492]; rRNA processing [GO:0006364]	hit with GO BP
GN015232	Chromosome_6A	494	2	6	34.81781376518219	0.4021164021164021	0.9090909090909091	6	0	0.9090909090909091	6	0	NA	NA	NA	0.8709016393442623	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015233	Chromosome_6A	483	2	8	36.024844720496894	0.5115848007414272	0.8152173913043478	8	0	0.9174311926605505	7	0	0	1	0	0.36923076923076925	114	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015234	Chromosome_6A	19798	12	309	34.78129103949894	0.5173728383534951	80.97976993256644	308	0.8896103896103896	93.57798165137615	44	0.9545454545454546	79.588600625468	264	0.8787878787878788	26.37075718015666	20	0.1	methylated (>=50%)	Q32LP2	Radixin	positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of protein localization to early endosome [GO:1902966]; regulation of cell shape [GO:0008360]; regulation of organelle assembly [GO:1902115]	hit with GO BP
GN015235	Chromosome_6A	10296	7	117	34.50854700854701	0.3874022676227009	90.57924063755345	114	0.9736842105263158	82.59423503325942	28	0.8928571428571429	93.01538981904278	86	1	15.948434622467772	43	0.23255813953488372	methylated (>=50%)	Q4KLT6	Pre-mRNA-splicing regulator WTAP (Female-lethal(2)D homolog) (WT1-associated protein) (Wilms tumor 1-associating protein)	mRNA modification [GO:0016556]; mRNA processing [GO:0006397]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN015236	Chromosome_6A	6738	3	92	35.78213119620065	0.42731408718669867	84.94557718841024	92	0.967391304347826	93.24055666003976	11	1	84.25249169435216	81	0.9629629629629629	13.765323992994746	43	0.18604651162790697	methylated (>=50%)	P04179	Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)	acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure [GO:0003069]; cellular response to ethanol [GO:0071361]; cellular response to oxidative stress [GO:0034599]; hydrogen peroxide biosynthetic process [GO:0050665]; intracellular oxygen homeostasis [GO:0032364]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of membrane hyperpolarization [GO:1902631]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway [GO:1902176]; negative regulation of vascular associated smooth muscle cell proliferation [GO:1904706]; positive regulation of cell migration [GO:0030335]; positive regulation of hydrogen peroxide biosynthetic process [GO:0010729]; positive regulation of phenotypic switching [GO:1900241]; positive regulation of vascular associated smooth muscle cell apoptotic process [GO:1905461]; positive regulation of vascular associated smooth muscle cell differentiation [GO:1905065]; protein homotetramerization [GO:0051289]; regulation of blood pressure [GO:0008217]; regulation of transcription by RNA polymerase II [GO:0006357]; release of cytochrome c from mitochondria [GO:0001836]; removal of superoxide radicals [GO:0019430]; response to activity [GO:0014823]; response to cadmium ion [GO:0046686]; response to electrical stimulus [GO:0051602]; response to hydrogen peroxide [GO:0042542]; response to hypoxia [GO:0001666]; response to immobilization stress [GO:0035902]; response to isolation stress [GO:0035900]; response to L-ascorbic acid [GO:0033591]; response to lipopolysaccharide [GO:0032496]; response to magnetism [GO:0071000]; response to manganese ion [GO:0010042]; response to selenium ion [GO:0010269]; response to silicon dioxide [GO:0034021]; response to superoxide [GO:0000303]; response to xenobiotic stimulus [GO:0009410]; response to zinc ion [GO:0010043]; superoxide metabolic process [GO:0006801]	hit with GO BP
GN015237	Chromosome_6A	963	1	16	40.29075804776739	0.43267529695880486	87.68361581920904	16	1	87.68361581920904	16	1	NA	NA	NA	88.29749735636236	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015238	Chromosome_6A	348	1	16	48.275862068965516	0.7892274982282069	0.5970149253731343	16	0	0.5970149253731343	16	0	NA	NA	NA	0.49305244285073957	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015239	Chromosome_6A	5959	2	170	37.03641550595737	0.8342570555633333	3.872151409810738	170	0.0058823529411764705	0.684931506849315	157	0	33.30039525691699	13	0.07692307692307693	0.6346328195829556	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015240	Chromosome_6A	369	1	12	42.00542005420054	0.7442016806722689	0.16420361247947454	12	0	0.16420361247947454	12	0	NA	NA	NA	1.2074643249176729	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015241	Chromosome_6A	3506	7	104	39.161437535653164	0.7886285773609717	0.6360424028268551	92	0	0.7113821138211383	36	0	0.5958829902491874	56	0	0.8931638612160769	60	0	unmethylated (<10%)	Q5RF32	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.10) (Betaine--homocysteine S-methyltransferase 2)	L-methionine salvage [GO:0071267]	hit with GO BP
GN015242	Chromosome_6A	697	2	15	38.30703012912482	0.5870297585626053	0.847457627118644	15	0	0.8086253369272237	14	0	1.1904761904761905	1	0	0.6342494714587738	31	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015243	Chromosome_6A	697	2	16	38.30703012912482	0.6267985611510791	0.3525264394829612	16	0	0.2635046113306983	15	0	1.0869565217391304	1	0	0.23507287259050305	39	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015244	Chromosome_6A	806	3	29	39.950372208436725	0.9045665634674923	0.29411764705882354	29	0	0.24937655860349128	23	0	0.45871559633027525	6	0	0.6159014557670772	43	0	unmethylated (<10%)	Q5RF32	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.10) (Betaine--homocysteine S-methyltransferase 2)	L-methionine salvage [GO:0071267]	hit with GO BP
GN015245	Chromosome_6A	4127	4	88	34.48025199903077	0.7191005896539298	0.33927056827820185	88	0	0.35307963907414674	46	0	0.3230272265805261	42	0	0.3334722801167153	44	0	unmethylated (<10%)	Q54L00	Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 (EC 2.7.11.1)	NA	hit, no GO BP
GN015246	Chromosome_6A	697	2	15	37.44619799139168	0.6139887244538408	0.6896551724137931	15	0	0.7656967840735069	14	0	0	1	0	0.9445843828715366	29	0	unmethylated (<10%)	Q9BXJ4	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015247	Chromosome_6A	3554	7	102	38.60438942037141	0.7850571725571726	0.5320917858330562	85	0	0.7677543186180422	34	0	0.4071246819338422	51	0	0.5265005265005265	59	0	unmethylated (<10%)	Q5RF32	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.10) (Betaine--homocysteine S-methyltransferase 2)	L-methionine salvage [GO:0071267]	hit with GO BP
GN015248	Chromosome_6A	369	1	7	42.00542005420054	0.4305	0.33222591362126247	7	0	0.33222591362126247	7	0	NA	NA	NA	0.6430868167202572	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015249	Chromosome_6A	711	2	18	38.11533052039381	0.6981996726677577	0.7920792079207921	18	0	0.8781558726673985	17	0	0	1	0	0.9115281501340483	48	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015250	Chromosome_6A	2732	3	74	35.94436310395315	0.845378326956449	0.5453306066803	74	0	0.5801526717557252	52	0	0.44404973357015987	22	0	1.8741633199464525	21	0	unmethylated (<10%)	O01700	Mitogen-activated protein kinase kinase kinase dlk-1 (EC 2.7.11.25) (DAP kinase-like kinase) (Death-associated protein kinase-like kinase)	axon extension involved in regeneration [GO:0048677]; axon regeneration [GO:0031103]; formation of growth cone in injured axon [GO:0048689]; MAPK cascade [GO:0000165]; microtubule polymerization [GO:0046785]; p38MAPK cascade [GO:0038066]; positive regulation of axon extension [GO:0045773]; positive regulation of axon extension involved in regeneration [GO:0048691]; regulation of 3'-UTR-mediated mRNA stabilization [GO:1905868]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of synapse organization [GO:0050807]	hit with GO BP
GN015251	Chromosome_6A	4830	4	125	35.09316770186335	0.8405800733445271	0.5143591941705958	125	0	0.4722550177095632	19	0	0.5201560468140443	106	0	24.9305941143809	42	0.11904761904761904	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015252	Chromosome_6A	18900	20	241	34.75661375661376	0.4224506422132708	89.67242406194163	241	0.979253112033195	87.15728715728716	54	0.9444444444444444	90.32645403377111	187	0.9893048128342246	1.6913319238900635	38	0	methylated (>=50%)	P0C6R2	Armadillo repeat-containing protein 2	cilium organization [GO:0044782]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN015253	Chromosome_6A	5148	6	109	31.35198135198135	0.861625678696902	0.938337801608579	108	0	0.7361268403171007	34	0	0.9937888198757764	74	0	1.0825439783491204	53	0	unmethylated (<10%)	P18172	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	NA	hit, no GO BP
GN015254	Chromosome_6A	363	1	11	43.52617079889807	0.6549122519271773	0.4784688995215311	11	0	0.4784688995215311	11	0	NA	NA	NA	3.1768610715979135	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015255	Chromosome_6A	12409	11	341	36.36876460633411	0.8311793030810529	1.0158077954688125	341	0	0.7869425823375109	73	0	1.0715299460686916	268	0	4.625884732052579	47	0	unmethylated (<10%)	P18172	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	NA	hit, no GO BP
GN015256	Chromosome_6A	3446	3	83	35.22925130586187	0.7794935246151834	0.5728314238952537	83	0	0.6118881118881119	22	0	0.5608974358974359	61	0	0.937601034594245	63	0	unmethylated (<10%)	P18173	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	glucose metabolic process [GO:0006006]; pupal chitin-based cuticle development [GO:0008364]; sperm storage [GO:0046693]	hit with GO BP
GN015257	Chromosome_6A	20560	17	533	36.34241245136187	0.7868872046815942	1.3069139966273187	532	0	0.7366920152091255	107	0	1.429889298892989	425	0	1.8198362147406733	63	0	unmethylated (<10%)	P18172	Glucose dehydrogenase [FAD, quinone] (EC 1.1.5.9) [Cleaved into: Glucose dehydrogenase [FAD, quinone] short protein]	NA	hit, no GO BP
GN015258	Chromosome_6A	2554	5	27	33.86844166014095	0.3687080940617882	6.668835393623943	20	0	6.323593545573485	16	0	7.682458386683739	4	0	9.154577288644322	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015259	Chromosome_6A	10790	7	185	37.98887859128823	0.4755972156304382	78.19967266775778	166	0.9337349397590361	89.11246855910888	55	1	73.44092760890003	111	0.9009009009009009	62.97029702970297	18	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015260	Chromosome_6A	510	1	21	48.03921568627451	0.7137145141943223	96.18163054695563	21	1	96.18163054695563	21	1	NA	NA	NA	89.96836873023045	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015261	Chromosome_6A	7619	11	214	36.30397689985563	0.8539489086457256	0.5172770535899027	212	0	0.6456241032998565	66	0	0.46525152660657165	146	0	0.5679129200189305	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015262	Chromosome_6A	8393	10	238	34.612176814011676	0.9469615732141723	0.5001190759704691	220	0	0.38910505836575876	45	0	0.5250875145857643	175	0	1.3982859720342806	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015263	Chromosome_6A	760	2	22	37.76315789473684	0.8122024676964927	0.3960857409133271	22	0	0.32102728731942215	20	0	0.9025270758122743	2	0	0.41525684404798524	25	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015264	Chromosome_6A	2635	3	60	34.11764705882353	0.7860978520286396	0.4813863928112965	60	0	0.704225352112676	15	0	0.4317111459968603	45	0	0.5785123966942148	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015265	Chromosome_6A	975	1	28	41.94871794871795	0.6529850746268657	0.5319148936170213	23	0	0.5319148936170213	23	0	NA	NA	NA	0.26595744680851063	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015266	Chromosome_6A	4595	4	122	36.03917301414581	0.8182601080134287	0.4608294930875576	120	0	0.33500837520938026	32	0	0.5003950487226758	88	0	0.4940982706560527	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015267	Chromosome_6A	52211	7	1183	35.60169312980023	0.7150806316755729	6.116764863417247	494	0	0.2982107355864811	18	0	6.448143115942029	476	0	4.864616796695732	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015268	Chromosome_6A	336	1	22	46.13095238095238	1.2635897435897436	NA	0	NA	NA	NA	NA	NA	NA	NA	9.84081041968162	54	0.14814814814814814	NA	NA	NA	NA	no Swiss-Prot hit
GN015269	Chromosome_6A	9697	9	252	35.65020109312158	0.8279547960271354	0.5443998215082553	246	0	0.574345883854499	58	0	0.5364503924558134	188	0	0.5729396209784046	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015270	Chromosome_6A	9366	8	142	38.03117659619902	0.4194811130172145	86.30530226274907	113	0.9292035398230089	91.40383426097712	35	0.9714285714285714	84.39024390243902	78	0.9102564102564102	86.61417322834646	30	0.9666666666666667	methylated (>=50%)	Q67XQ0	DUF21 domain-containing protein At4g14240 (CBS domain-containing protein CBSDUF1)	magnesium ion homeostasis [GO:0010960]; regulation of stomatal opening [GO:1902456]	hit with GO BP
GN015271	Chromosome_6A	2702	4	81	37.37971872686899	0.905136476426799	0.461133069828722	81	0	0.44365572315882873	61	0	0.5115089514066496	20	0	2.807486631016043	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015272	Chromosome_6A	15683	10	317	37.01460179812536	0.5902636572448693	67.58427968369107	311	0.7395498392282959	57.91749833666001	51	0.5098039215686274	69.68797509592413	260	0.7846153846153846	0.8099352051835853	68	0	methylated (>=50%)	Q2V897	Toll-like receptor 2 (CD antigen CD282)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; cellular response to triacyl bacterial lipopeptide [GO:0071727]; immune response [GO:0006955]; inflammatory response [GO:0006954]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN015273	Chromosome_6A	1938	4	75	40.35087719298246	0.9508949599623174	0.5034446210916799	75	0	0.6132282084975909	57	0	0.335345405767941	18	0	0.8852821836960532	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015274	Chromosome_6A	29496	40	365	35.56753458096013	0.39229529938987123	74.89693757361601	363	0.8760330578512396	80.24797843665768	201	0.9253731343283582	70.42608773984325	162	0.8148148148148148	14.182257091128546	42	0.23809523809523808	methylated (>=50%)	Q6Q759	Sperm-associated antigen 17 (Projection protein PF6 homolog)	axonemal central apparatus assembly [GO:1904158]; epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; intramanchette transport [GO:1990953]; manchette assembly [GO:1905198]; motile cilium assembly [GO:0044458]; spermatogenesis [GO:0007283]	hit with GO BP
GN018133	Chromosome_6A	1210	3	5	34.049586776859506	0.14452938365981843	90.15151515151516	2	1	94.73684210526316	1	1	86.66666666666667	1	1	40.08968609865471	38	0.3684210526315789	NA	NA	NA	NA	no Swiss-Prot hit
GN015275	Chromosome_6A	1056	1	25	45.17045454545455	0.4699181203275187	51.61904761904762	19	0.47368421052631576	51.61904761904762	19	0.47368421052631576	NA	NA	NA	35.01577287066246	20	0.3	methylated (>=50%)	Q28GQ2	Enoyl-[acyl-carrier-protein] reductase, mitochondrial (EC 1.3.1.104) (2-enoyl thioester reductase)	pronephric nephron tubule development [GO:0039020]	hit with GO BP
GN015276	Chromosome_6A	27559	11	345	35.3278420842556	0.4035884175828514	82.98447624819356	341	0.9090909090909091	72.58713136729223	25	0.84	83.76171150859261	316	0.9145569620253164	50.03589375448672	28	0.4642857142857143	methylated (>=50%)	Q8BHW2	Protein OSCP1	xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]	hit with GO BP
GN015277	Chromosome_6A	6550	6	110	34.396946564885496	0.5677824254593482	81.67496970512993	107	0.8878504672897196	66.25463535228677	18	0.6111111111111112	83.55998791175581	89	0.9438202247191011	64.19863217365447	53	0.49056603773584906	methylated (>=50%)	Q9NYL5	24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.14.26) (Cytochrome P450 39A1) (hCYP39A1) (Oxysterol 7-alpha-hydroxylase)	bile acid biosynthetic process [GO:0006699]; cholesterol catabolic process [GO:0006707]; cholesterol homeostasis [GO:0042632]; digestion [GO:0007586]; sterol metabolic process [GO:0016125]	hit with GO BP
GN015278	Chromosome_6A	6862	8	183	36.199358787525505	0.814639225417214	0.998389694041868	169	0	0.200160128102482	50	0	1.2908904210063077	119	0	0	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015279	Chromosome_6A	8853	8	266	36.28148650175082	0.9131631480249228	0	1	0	NA	NA	NA	0	1	0	0	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015280	Chromosome_6A	810	1	19	36.91358024691358	0.703125	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015281	Chromosome_6A	5157	9	128	35.52452976536746	0.7908182580567868	0.5846363018354861	128	0	0.48605781529803016	77	0	0.6964596633778294	51	0	0.5889646621202728	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015282	Chromosome_6A	4656	4	47	37.86512027491409	0.2841715688184191	54.621848739495796	47	0.5319148936170213	55.367231638418076	18	0.6111111111111112	54.180602006688964	29	0.4827586206896552	5.293005671077505	9	0	methylated (>=50%)	Q8C8M1	SIN3-HDAC complex-associated factor (Protein FAM60A) (Tera protein)	negative regulation of cell differentiation [GO:0045596]; negative regulation of cell migration [GO:0030336]; negative regulation of stem cell population maintenance [GO:1902455]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transforming growth factor beta receptor signaling pathway [GO:0030512]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of stem cell population maintenance [GO:1902459]	hit with GO BP
GN015283	Chromosome_6A	27258	17	498	37.17440751339056	0.5296322047349163	92.66675826063063	426	0.9741784037558685	94.9822380106572	75	1	92.24299065420561	351	0.9686609686609686	92.5	21	1	methylated (>=50%)	Q93034	Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing receptor 1) (VACM-1)	cell migration [GO:0016477]; ERBB2 signaling pathway [GO:0038128]; G1/S transition of mitotic cell cycle [GO:0000082]; intrinsic apoptotic signaling pathway [GO:0097193]; negative regulation of focal adhesion assembly [GO:0051895]; negative regulation of focal adhesion disassembly [GO:0120184]; positive regulation of cell migration [GO:0030335]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K11-linked ubiquitination [GO:0070979]; protein ubiquitination [GO:0016567]; reelin-mediated signaling pathway [GO:0038026]; regulation of neuron migration [GO:2001222]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN015284	Chromosome_6A	11793	6	221	36.2079199525142	0.571914315978099	85.3334194048157	221	0.9502262443438914	56	10	0.6	86.21102320324447	211	0.966824644549763	42.812336644014636	31	0.45161290322580644	methylated (>=50%)	P61759	Prefoldin subunit 3 (von Hippel-Lindau-binding protein 1) (VBP-1) (VHL-binding protein 1)	negative regulation of amyloid fibril formation [GO:1905907]; protein folding [GO:0006457]; tubulin complex assembly [GO:0007021]	hit with GO BP
GN015285	Chromosome_6A	702	1	16	39.88603988603989	0.585	0.41841004184100417	16	0	0.41841004184100417	16	0	NA	NA	NA	0.6575486586007364	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015286	Chromosome_6A	2142	1	68	38.23529411764706	0.8687063875469673	0.6397529230090447	68	0	0.6397529230090447	68	0	NA	NA	NA	0.8112980769230769	43	0.046511627906976744	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015287	Chromosome_6A	528	1	9	39.015151515151516	0.45	0.5050505050505051	9	0	0.5050505050505051	9	0	NA	NA	NA	0.5679335954565312	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015288	Chromosome_6A	2130	2	79	42.20657276995305	0.8396287610398683	0.6499133448873483	77	0	0.5594405594405595	30	0	0.6905210295040803	47	0	0.4424778761061947	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015289	Chromosome_6A	501	1	19	45.10978043912176	0.7526091081593927	0.5847953216374269	19	0	0.5847953216374269	19	0	NA	NA	NA	3.427265803503427	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015290	Chromosome_6A	393	1	7	42.23918575063613	0.4021929824561403	0	7	0	0	7	0	NA	NA	NA	2.5770591207680646	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015291	Chromosome_6A	597	1	42	55.44388609715243	0.9184615384615384	0	14	0	0	14	0	NA	NA	NA	1.861427094105481	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015292	Chromosome_6A	4425	3	145	37.69491525423729	0.9227234813621721	0.41695621959694235	144	0	0.3992015968063872	61	0	0.42643923240938164	83	0	0.6194690265486725	52	0	unmethylated (<10%)	O15973	Rhodopsin, GQ-coupled (GQ-rhodopsin)	visual perception [GO:0007601]	hit with GO BP
GN015293	Chromosome_6A	864	3	25	37.61574074074074	0.8221055035396209	0.5945303210463734	20	0	0.6442705936493327	18	0	0.2857142857142857	2	0	2.259015013329592	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015294	Chromosome_6A	288	1	9	43.40277777777778	0.7012987012987013	0	9	0	0	9	0	NA	NA	NA	0.19646365422396855	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015295	Chromosome_6A	7016	9	115	35.59007981755986	0.518307528448328	91.03351240726529	114	1	94.97171590194846	67	1	88.33045729076791	47	1	91.83818310858766	23	1	methylated (>=50%)	Q8JHV9	Baculoviral IAP repeat-containing protein 7-A (EC 2.3.2.27) (E3 ubiquitin-protein ligase EIAP-A) (Embryonic/Egg IAP) (xEIAP/XLX) (Inhibitor of apoptosis-like protein) (IAP-like protein) (RING-type E3 ubiquitin transferase EIAP-A) (XIAP homolog XLX) (XLX)	negative regulation of apoptotic process [GO:0043066]; positive regulation of protein ubiquitination [GO:0031398]; protein autoubiquitination [GO:0051865]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN015296	Chromosome_6A	354	1	4	44.35028248587571	0.2302439024390244	61.971830985915496	4	0.75	61.971830985915496	4	0.75	NA	NA	NA	1.3058963197467353	44	0	NA	A4IFD0	Adenylate kinase isoenzyme 5 (AK 5) (EC 2.7.4.3) (EC 2.7.4.6) (ATP-AMP transphosphorylase 5)	ATP metabolic process [GO:0046034]	hit with GO BP
GN015297	Chromosome_6A	9354	11	104	34.691041265768654	0.3735688990574145	77.83630470016207	104	0.8653846153846154	81.44560357675111	20	0.95	77.03728142527218	84	0.8452380952380952	26.752221125370188	31	0.3225806451612903	methylated (>=50%)	P32939	Ypt/Rab-type GTPase YPT7 (Ypt7p) (Vacuolar morphology protein 4)	cytoplasm to vacuole targeting by the Cvt pathway [GO:0032258]; endocytosis [GO:0006897]; macroautophagy [GO:0016236]; piecemeal microautophagy of the nucleus [GO:0034727]; protein localization to vacuole [GO:0072665]; regulation of protein-containing complex assembly [GO:0043254]; regulation of vacuole fusion, non-autophagic [GO:0032889]; retrograde transport, endosome to Golgi [GO:0042147]; vacuole inheritance [GO:0000011]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN015298	Chromosome_6A	7343	6	135	34.972082255209045	0.6050992155053069	82.28204878996988	135	0.8814814814814815	83.30550918196995	45	0.9555555555555556	81.97136703408083	90	0.8444444444444444	69.74190005491488	42	0.7142857142857143	methylated (>=50%)	W6YKT9	Polyglycine hydrolase (EC 3.4.21.-) (Chitinase modifying protein) (BzCMP)	effector-mediated suppression of host defense response [GO:0140590]	hit with GO BP
GN015299	Chromosome_6A	15283	11	202	37.289799123208795	0.3806103097806535	81.52225566291779	202	0.9851485148514851	86.02723505032564	34	1	80.82655207095182	168	0.9821428571428571	88.22489391796323	36	1	methylated (>=50%)	Q6G6M9	Protein flp (FmtA-like protein)	NA	hit, no GO BP
GN015300	Chromosome_6A	513	1	27	48.927875243664715	0.883467278989667	0.998003992015968	27	0	0.998003992015968	27	0	NA	NA	NA	2.404438964241677	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015301	Chromosome_6A	13211	6	331	36.07599727499811	0.7700983518098498	1.0932864520382375	330	0	0.8436080467229072	36	0	1.1163795690534781	294	0	0.6084070796460177	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015302	Chromosome_6A	35795	31	523	35.270289146528846	0.47067962382609074	85.7846842216646	513	0.9337231968810916	88.75052764879696	99	0.9797979797979798	85.28882458802357	414	0.9227053140096618	0.7954043305346885	46	0	methylated (>=50%)	O94822	E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (RING finger protein 160) (RING-type E3 ubiquitin transferase listerin) (Zinc finger protein 294)	protein autoubiquitination [GO:0051865]; rescue of stalled cytosolic ribosome [GO:0072344]; ribosome-associated ubiquitin-dependent protein catabolic process [GO:1990116]	hit with GO BP
GN015303	Chromosome_6A	2035	3	43	35.13513513513514	0.6884519763343404	0.5449591280653951	42	0	0.6031363088057901	18	0	0.5098324836125273	24	0	0.3538115149565777	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015304	Chromosome_6A	1282	2	30	36.58346333853354	0.7001128627079768	12.380952380952381	17	0	7.2727272727272725	11	0	22.06896551724138	6	0	27.061310782241016	17	0.23529411764705882	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015305	Chromosome_6A	375	1	1	41.86666666666667	0.06097560975609756	91.66666666666667	1	1	91.66666666666667	1	1	NA	NA	NA	85.51401869158879	6	1	NA	NA	NA	NA	no Swiss-Prot hit
GN015306	Chromosome_6A	207	1	2	41.54589371980676	0.2319327731092437	91.30434782608695	1	1	91.30434782608695	1	1	NA	NA	NA	1.1204481792717087	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015307	Chromosome_6A	27073	5	526	34.00066486905773	0.6735212247376297	9.008728179551122	421	0.03800475059382423	7.386172006745363	57	0.07017543859649122	9.255553845364528	364	0.03296703296703297	1.3791763791763791	49	0	unmethylated (<10%)	O08863	Baculoviral IAP repeat-containing protein 3 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 2) (C-IAP2) (Inhibitor of apoptosis protein 1) (mIAP1) (RING-type E3 ubiquitin transferase BIRC3)	cellular response to tumor necrosis factor [GO:0071356]; necroptotic process [GO:0070266]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; negative regulation of phosphorylation [GO:0042326]; negative regulation of reactive oxygen species metabolic process [GO:2000378]; positive regulation of protein polyubiquitination [GO:1902916]; positive regulation of protein ubiquitination [GO:0031398]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of necroptotic process [GO:0060544]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]	hit with GO BP
GN015308	Chromosome_6A	3792	6	124	39.31962025316456	0.8464620934728838	5.794245171462357	76	0	3.215434083601286	44	0	8.275328692962104	32	0	0.8602150537634409	17	0	unmethylated (<10%)	A9ULZ2	Baculoviral IAP repeat-containing protein 7-B (EC 2.3.2.27) (E3 ubiquitin-protein ligase EIAP-B) (Embryonic/Egg IAP-B) (EIAP/XLX-B) (RING-type E3 ubiquitin transferase EIAP-B)	negative regulation of apoptotic process [GO:0043066]; positive regulation of protein ubiquitination [GO:0031398]; protein autoubiquitination [GO:0051865]; regulation of cell cycle [GO:0051726]	hit with GO BP
GN015309	Chromosome_6A	838	2	20	47.25536992840095	0.43335488041370396	55.294117647058826	20	0.8	54.33746425166826	14	0.7142857142857143	57.38045738045738	6	1	84.48036951501155	40	0.975	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013242	Chromosome_6A	231	1	6	51.082251082251084	0.40993788819875776	40.68767908309456	6	0	40.68767908309456	6	0	NA	NA	NA	66.18110236220473	53	0.8867924528301887	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015310	Chromosome_6A	1197	1	49	41.10275689223057	0.9697916666666667	0.6553079947575361	49	0	0.6553079947575361	49	0	NA	NA	NA	0.539568345323741	50	0	unmethylated (<10%)	Q13489	Baculoviral IAP repeat-containing protein 3 (EC 2.3.2.27) (Apoptosis inhibitor 2) (API2) (Cellular inhibitor of apoptosis 2) (C-IAP2) (IAP homolog C) (Inhibitor of apoptosis protein 1) (hIAP-1) (hIAP1) (RING finger protein 49) (RING-type E3 ubiquitin transferase BIRC3) (TNFR2-TRAF-signaling complex protein 1)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; spermatogenesis [GO:0007283]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN015311	Chromosome_6A	399	1	14	40.100250626566414	0.8816287878787878	2.2388059701492535	14	0	2.2388059701492535	14	0	NA	NA	NA	0.9042553191489362	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001109	Chromosome_6A	2082	3	40	35.59077809798271	0.6066875500837765	0.8159934720522236	40	0	0.6311992786293958	20	0	0.9687034277198212	20	0	0.6620610247553252	72	0	unmethylated (<10%)	Q9D305	THAP domain-containing protein 2	NA	hit, no GO BP
GN015312	Chromosome_6A	968	3	24	41.735537190082646	0.5707547169811321	NA	0	NA	NA	NA	NA	NA	NA	NA	27.157894736842106	30	0.16666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN015313	Chromosome_6A	357	1	13	52.661064425770306	0.5300970873786408	90.9090909090909	10	1	90.9090909090909	10	1	NA	NA	NA	78.76712328767124	37	0.8648648648648649	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015314	Chromosome_6A	2013	5	27	33.38301043219076	0.48479199372056514	30.227439471753485	27	0.25925925925925924	28.11284046692607	22	0.18181818181818182	36.71641791044776	5	0.6	52.527743526510484	30	0.5333333333333333	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015315	Chromosome_6A	4195	4	63	34.278903456495826	0.5123073165436387	55.97165991902834	52	0.6538461538461539	23.64475201845444	21	0.2857142857142857	69.3371483071054	31	0.9032258064516129	18.296892980437285	67	0.14925373134328357	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015316	Chromosome_6A	32261	23	535	35.67775332444747	0.5239679578621279	80.00375105498422	523	0.9082217973231358	86.86743247438683	68	0.8970588235294118	79.23531456378171	455	0.9098901098901099	0.57636887608069165	38	0	methylated (>=50%)	Q9UNX4	WD repeat-containing protein 3	maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN015317	Chromosome_6A	1157	2	44	43.82022471910113	0.7923424124513618	0.6481481481481481	44	0	0.5274261603375527	37	0	1.5151515151515151	7	0	1.1373209772535804	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015318	Chromosome_6A	594	1	18	42.76094276094276	0.7049050632911392	1.0638297872340425	18	0	1.0638297872340425	18	0	NA	NA	NA	1.6183986371379897	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015319	Chromosome_6A	339	1	16	45.72271386430678	0.904	0.39100684261974583	16	0	0.39100684261974583	16	0	NA	NA	NA	0.8676789587852495	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015320	Chromosome_6A	339	1	16	45.42772861356932	0.9186991869918699	0.5505505505505506	16	0	0.5505505505505506	16	0	NA	NA	NA	0.6532784902008226	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015321	Chromosome_6A	1773	1	74	49.01297236322617	0.6957365574292078	0.5925925925925926	26	0	0.5925925925925926	26	0	NA	NA	NA	0.3418803418803419	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015322	Chromosome_6A	219	1	10	42.465753424657535	1.228956228956229	0.78125	10	0	0.78125	10	0	NA	NA	NA	0.579073482428115	86	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015323	Chromosome_6A	690	1	24	38.84057971014493	0.9235402375773799	84.2969776609724	24	1	84.2969776609724	24	1	NA	NA	NA	83.98548846851516	49	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015324	Chromosome_6A	2413	4	88	40.07459593866556	0.9106753812636166	1.1147811725846408	88	0	0.7419183889772125	69	0	2.4299065420560746	19	0	0.45685279187817257	53	0	unmethylated (<10%)	Q8C8H8	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN015325	Chromosome_6A	1931	3	61	37.95960642154324	0.8826469442196445	1.909830932999374	61	0	2.080566622399292	48	0	1.4973262032085561	13	0	1.353461738677772	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015326	Chromosome_6A	363	1	7	40.22038567493113	0.4769144144144144	0.8	6	0	0.8	6	0	NA	NA	NA	1.087695445275323	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015327	Chromosome_6A	177	1	10	54.23728813559322	0.7766564282580078	1.1194029850746268	10	0	1.1194029850746268	10	0	NA	NA	NA	0.5135227661759671	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015328	Chromosome_6A	1035	1	48	44.2512077294686	0.9504132231404959	0.9523809523809523	47	0	0.9523809523809523	47	0	NA	NA	NA	0.7031488841332926	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015329	Chromosome_6A	390	1	18	46.92307692307692	0.8496732026143791	0.7246376811594203	18	0	0.7246376811594203	18	0	NA	NA	NA	0.8340649692712906	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015330	Chromosome_6A	1952	2	69	40.72745901639344	0.8568265964349784	0.7318348144276007	69	0	0.7318348144276007	69	0	NA	NA	NA	0.7403020432336394	52	0	unmethylated (<10%)	A0A2B4RP11	Cyclic GMP-AMP synthase-like receptor 1 (Sp-cGLR1) (Cyclic UMP-AMP synthase cGLR1) (EC 2.7.7.-)	NA	hit, no GO BP
GN015331	Chromosome_6A	6581	2	206	39.142987387934966	0.8179101055806938	1.4136182151721162	206	0	1.8221460831646161	142	0	0.49191848208011246	64	0	0.7900207900207901	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015332	Chromosome_6A	3868	3	72	35.056876938986555	0.6174598423625661	91.54108900944344	72	0.9444444444444444	94.43254817987152	8	1	91.24168514412416	64	0.9375	92.12579806100733	53	0.9433962264150944	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015333	Chromosome_6A	3990	11	136	41.72932330827068	0.7858584863853464	1.008853201564752	136	0	1.0198604401502953	110	0	0.9725906277630415	26	0	0.8278145695364238	46	0	unmethylated (<10%)	Q3SYU2	Elongation factor 2 (EF-2) (EC 3.6.5.-)	positive regulation of translation [GO:0045727]; translational elongation [GO:0006414]	hit with GO BP
GN015334	Chromosome_6A	486	1	13	43.415637860082306	0.5705255553548854	0.24813895781637718	13	0	0.24813895781637718	13	0	NA	NA	NA	0.6958657388456816	61	0	unmethylated (<10%)	P17971	Potassium voltage-gated channel protein Shal (Shaker cognate l) (Shal2)	action potential [GO:0001508]; associative learning [GO:0008306]; chemical synaptic transmission [GO:0007268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]	hit with GO BP
GN015335	Chromosome_6A	519	1	14	41.61849710982659	0.6263793103448276	1.1441647597254005	14	0	1.1441647597254005	14	0	NA	NA	NA	0.5489183080400387	49	0	unmethylated (<10%)	P17971	Potassium voltage-gated channel protein Shal (Shaker cognate l) (Shal2)	action potential [GO:0001508]; associative learning [GO:0008306]; chemical synaptic transmission [GO:0007268]; potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; protein homooligomerization [GO:0051260]	hit with GO BP
GN015336	Chromosome_6A	251	2	10	44.62151394422311	0.8715277777777778	0.23148148148148148	10	0	0.35335689045936397	8	0	0	2	0	0.5880780539962577	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015337	Chromosome_6A	2824	4	49	36.756373937677054	0.5303855544525234	0.8605072463768116	49	0	1.5527950310559007	22	0	0.322061191626409	27	0	0.6750807161725858	54	0	unmethylated (<10%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN015338	Chromosome_6A	13883	11	249	35.59749333717496	0.5721554323258243	79.5043755622802	246	0.9146341463414634	82.8	29	0.9655172413793104	79.04353500512725	217	0.9078341013824884	65.64315352697095	21	0.7619047619047619	methylated (>=50%)	Q924X7	Serine/threonine-protein kinase 33 (EC 2.7.11.1)	manchette assembly [GO:1905198]; mitotic DNA damage checkpoint signaling [GO:0044773]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein polyubiquitination [GO:1902915]; protein autophosphorylation [GO:0046777]; spermatogenesis [GO:0007283]	hit with GO BP
GN015339	Chromosome_6A	168	1	6	41.666666666666664	0.8228571428571428	0.25510204081632654	6	0	0.25510204081632654	6	0	NA	NA	NA	0.618828176431863	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015340	Chromosome_6A	1755	1	47	38.46153846153846	0.7293490370841954	0.4659498207885305	47	0	0.4659498207885305	47	0	NA	NA	NA	0.7879656160458453	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015341	Chromosome_6A	1494	1	38	38.15261044176707	0.7115979995236961	0.5512679162072768	38	0	0.5512679162072768	38	0	NA	NA	NA	0.5434782608695652	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015342	Chromosome_6A	1248	1	35	39.98397435897436	0.7021604938271605	0.6470588235294118	35	0	0.6470588235294118	35	0	NA	NA	NA	0.8964955175224124	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015343	Chromosome_6A	2934	1	36	40.14996591683708	0.32618423368754573	92.17252396166134	36	0.9722222222222222	92.17252396166134	36	0.9722222222222222	NA	NA	NA	15.461446264482621	51	0.17647058823529413	methylated (>=50%)	Q95KD7	Coiled-coil domain-containing protein 191	NA	hit, no GO BP
GN015344	Chromosome_6A	1155	1	32	45.02164502164502	0.573343261355175	69.47935368043088	32	0.59375	69.47935368043088	32	0.59375	NA	NA	NA	9.104627766599597	32	0.09375	methylated (>=50%)	Q1JQD7	Molybdenum cofactor biosynthesis protein 1 [Includes: GTP 3',8-cyclase (EC 4.1.99.22) (MOCS1A) (Molybdenum cofactor biosynthesis protein A); Cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) (MOCS1B) (Molybdenum cofactor biosynthesis protein C)]	Mo-molybdopterin cofactor biosynthetic process [GO:0006777]	hit with GO BP
GN015345	Chromosome_6A	837	1	6	42.89127837514934	0.1571929385251033	51.492537313432834	6	0.6666666666666666	51.492537313432834	6	0.6666666666666666	NA	NA	NA	55.39714867617108	26	0.8461538461538461	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015346	Chromosome_6A	7853	7	106	34.12708519037311	0.46464758102689135	83.48265563978865	94	0.9042553191489362	92.13649851632047	11	1	81.89725468877413	83	0.891566265060241	38.465160075329564	43	0.37209302325581395	methylated (>=50%)	Q6TLH3	CUE domain-containing protein 2	NA	hit, no GO BP
GN015347	Chromosome_6A	10230	13	150	35.20039100684262	0.4752365962839564	91.33874881316595	150	0.94	94.80611881892565	54	0.9629629629629629	89.87702459508098	96	0.9270833333333334	37.89599521817095	32	0.375	methylated (>=50%)	P40927	NADP-dependent malic enzyme (NADP-ME) (EC 1.1.1.40)	malate metabolic process [GO:0006108]	hit with GO BP
GN015348	Chromosome_6A	3063	2	113	37.12047012732615	1.0716355710225338	0.4446724816145032	113	0	0.4622941346431667	65	0	0.4191114836546521	48	0	0.2502681444404719	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015349	Chromosome_6A	1029	1	7	36.63751214771623	0.20538922155688621	1.183431952662722	7	0	1.183431952662722	7	0	NA	NA	NA	0.6779661016949152	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015350	Chromosome_6A	1572	3	44	35.75063613231552	0.8847615027437737	0.6283662477558348	44	0	1.6296296296296295	16	0	0.1931745009658725	28	0	2.1104467112205416	47	0	unmethylated (<10%)	Q65YR8	Cystatin-A1	adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway [GO:0140582]; regulation of proteolysis [GO:0030162]; response to bacterium [GO:0009617]	hit with GO BP
GN015351	Chromosome_6A	7276	5	166	34.33205057724024	0.7766800998777571	0.9792316797589583	166	0	0.7355399531929121	62	0	1.094890510948905	104	0	0.7725736359246741	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015352	Chromosome_6A	950	2	29	45.05263157894737	0.6031746031746031	NA	0	NA	NA	NA	NA	NA	NA	NA	74.61031175059952	43	0.7674418604651163	NA	NA	NA	NA	no Swiss-Prot hit
GN015353	Chromosome_6A	2150	6	30	39.53488372093023	0.3590034731498798	69.20980926430518	27	1	65.05319148936171	17	1	74.7013352073085	10	1	72.4914675767918	25	0.92	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015354	Chromosome_6A	1944	1	23	39.660493827160494	0.3019897607694282	72.39819004524887	23	0.9130434782608695	72.39819004524887	23	0.9130434782608695	NA	NA	NA	8.995956873315365	55	0.03636363636363636	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015355	Chromosome_6A	23029	16	409	34.98197924356246	0.5807521267223664	87.90939199411211	370	0.9513513513513514	86.30862329803328	49	0.9183673469387755	88.10342456333379	321	0.956386292834891	3.5480023852116878	56	0	methylated (>=50%)	Q6EE31	T-complex protein 1 subunit theta (TCP-1-theta) (EC 3.6.1.-) (CCT-theta)	protein folding [GO:0006457]	hit with GO BP
GN015356	Chromosome_6A	23061	26	290	34.84671089718572	0.4148774711648963	79.02472370969579	286	0.8741258741258742	85.15492957746478	74	0.918918918918919	77.47072265067123	212	0.8584905660377359	0.5531295487627366	39	0	methylated (>=50%)	Q5ZMR9	Exportin-4	protein export from nucleus [GO:0006611]	hit with GO BP
GN015357	Chromosome_6A	11335	7	305	34.5125716806352	0.9063787270545991	0.7006336613260522	303	0	0.6782215523737755	57	0	0.7041833263710688	246	0	0.6056157093044595	64	0	unmethylated (<10%)	Q17134	T-box transcription factor T homolog 1 (AmBra-1) (Brachyury protein homolog 1)	cell fate specification [GO:0001708]; heart morphogenesis [GO:0003007]; mesoderm formation [GO:0001707]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN015358	Chromosome_6A	300	1	14	51	0.7526881720430108	0	14	0	0	14	0	NA	NA	NA	2.9088558500323205	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015359	Chromosome_6A	1590	2	49	39.874213836477985	0.782794791415481	1.0143198090692125	49	0	0.6631299734748011	22	0	1.3015184381778742	27	0	0.6151142355008787	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015360	Chromosome_6A	288	1	1	40.97222222222222	0.08333333333333333	0	1	0	0	1	0	NA	NA	NA	0.42016806722689076	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015361	Chromosome_6A	288	1	1	41.666666666666664	0.08144796380090498	1.492537313432836	1	0	1.492537313432836	1	0	NA	NA	NA	0.36075036075036077	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001416	Chromosome_6A	321	1	12	55.14018691588785	0.5487179487179488	0	3	0	0	3	0	NA	NA	NA	0.5534034311012729	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002583	Chromosome_6A	633	1	5	37.12480252764613	0.22928136771950158	NA	0	NA	NA	NA	NA	NA	NA	NA	4.516129032258065	6	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015362	Chromosome_6A	4795	6	110	33.55578727841502	0.8154761904761905	0.6305637982195845	110	0	0.3816793893129771	20	0	0.6906077348066298	90	0	3.052805280528053	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015363	Chromosome_6A	591	1	15	39.08629441624365	0.6660405709992487	0.18115942028985507	15	0	0.18115942028985507	15	0	NA	NA	NA	0.6701187937861712	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015364	Chromosome_6A	1440	1	32	39.791666666666664	0.5640008812513769	0.5167958656330749	16	0	0.5167958656330749	16	0	NA	NA	NA	4.822335025380711	53	0	unmethylated (<10%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN015365	Chromosome_6A	572	2	11	45.62937062937063	0.3955242645209957	10.294117647058824	10	0	12.053571428571429	9	0	2.0833333333333335	1	0	19.609724888035828	48	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015366	Chromosome_6A	2902	6	14	31.977946243969676	0.18881375624491692	17.29106628242075	4	0	26.829268292682926	1	0	8.743169398907105	3	0	1.5595009596928984	70	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015367	Chromosome_6A	5272	7	82	36.62746585735964	0.4638703793121949	51.697634504887695	72	0.4722222222222222	47.81070322865988	17	0.47058823529411764	52.48653500897666	55	0.4727272727272727	40.375586854460096	32	0.125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015368	Chromosome_6A	2671	5	58	35.529764133283415	0.6905562142838039	0.4770794440987347	56	0	0.36469730123997085	25	0	0.5217391304347826	31	0	0.9961685823754789	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015369	Chromosome_6A	27726	17	664	35.81475871023588	0.7494672735118587	1.1590431980130689	657	0	0.9438775510204082	89	0	1.187251262499582	568	0	0.351123595505618	58	0	unmethylated (<10%)	A6NNY8	Ubiquitin carboxyl-terminal hydrolase 27 (EC 3.4.19.12) (Deubiquitinating enzyme 27) (Ubiquitin carboxyl-terminal hydrolase 22-like) (Ubiquitin thioesterase 27) (Ubiquitin-specific-processing protease 27) (X-linked ubiquitin carboxyl-terminal hydrolase 27)	defense response to virus [GO:0051607]; positive regulation of apoptotic process [GO:0043065]; positive regulation of type I interferon-mediated signaling pathway [GO:0060340]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]; protein stabilization [GO:0050821]	hit with GO BP
GN015370	Chromosome_6A	3046	5	51	37.16349310571241	0.48873074599818783	3.836424957841484	51	0	4.5178105994787146	28	0	3.194103194103194	23	0	1.432740780047758	38	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN015371	Chromosome_6A	12927	4	340	35.08934787653748	0.8551386376866635	1.6467065868263473	339	0	0.25316455696202533	22	0	1.7409669501683886	317	0	0.6332196785192401	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015372	Chromosome_6A	21816	19	558	34.694719471947195	0.8500226936607179	0.6722577209797657	555	0	0.579950289975145	38	0	0.6803213432727799	517	0	0.39096437880104257	71	0	unmethylated (<10%)	Q9FPS2	Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.4.19.12) (Deubiquitinating enzyme 25) (AtUBP25) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25)	protein deubiquitination [GO:0016579]	hit with GO BP
GN015373	Chromosome_6A	621	1	13	40.90177133655394	0.5005580357142857	1.073345259391771	13	0	1.073345259391771	13	0	NA	NA	NA	0.9960159362549801	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015374	Chromosome_6A	843	1	18	40.450771055753265	0.5223407917383821	2.727272727272727	17	0	2.727272727272727	17	0	NA	NA	NA	1.1019283746556474	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015375	Chromosome_6A	654	1	12	35.47400611620795	0.6093167701863355	0.2994011976047904	12	0	0.2994011976047904	12	0	NA	NA	NA	0.945410186032327	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015376	Chromosome_6A	216	1	10	40.27777777777778	1.2272727272727273	0.45745654162854527	8	0	0.45745654162854527	8	0	NA	NA	NA	0.32786885245901637	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015377	Chromosome_6A	432	1	19	42.129629629629626	1.0033003300330032	0.5076142131979695	19	0	0.5076142131979695	19	0	NA	NA	NA	0.8701705534284719	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015378	Chromosome_6A	4806	1	126	38.57677902621723	0.7158947028691068	73.17073170731707	126	0.9841269841269841	73.17073170731707	126	0.9841269841269841	NA	NA	NA	83.98637137989779	28	0.9642857142857143	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015379	Chromosome_6A	5915	3	106	37.9374471682164	0.49809180923812185	78.71904673245206	106	0.8301886792452831	70.50359712230215	18	0.7222222222222222	80.53660754888585	88	0.8522727272727273	67.95903438185809	40	0.675	methylated (>=50%)	Q9VEX9	Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (Bicoid-interacting protein 1) (dSAP18)	heterochromatin formation [GO:0031507]; negative regulation of DNA-templated transcription [GO:0045892]	hit with GO BP
GN015380	Chromosome_6A	294	1	6	42.51700680272109	0.45184426229508196	2.380952380952381	6	0	2.380952380952381	6	0	NA	NA	NA	5.4583624912526245	53	0	unmethylated (<10%)	P82596	Perlucin	NA	hit, no GO BP
GN015381	Chromosome_6A	3836	3	86	40.84984358706986	0.5383279809926633	94.8124501197127	86	1	93.82964453386988	28	1	95.45855379188713	58	1	90.04187994416007	32	1	methylated (>=50%)	Q8BUL5	Kelch-like protein 7	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN015382	Chromosome_6A	24260	19	379	35.263808738664466	0.5027122670007533	72.9375579337659	373	0.8605898123324397	87.71874005727013	59	1	70.68136564518478	314	0.8343949044585988	92.9157031742695	48	1	methylated (>=50%)	Q8BUG5	Calcyphosin-2 (Calcyphosine-2)	brain-derived neurotrophic factor receptor signaling pathway [GO:0031547]; cerebellum development [GO:0021549]; dendrite development [GO:0016358]; hippocampal interneuron differentiation [GO:0097410]; protein secretion [GO:0009306]; social behavior [GO:0035176]; synapse organization [GO:0050808]	hit with GO BP
GN015383	Chromosome_6A	5788	10	125	34.01865929509329	0.7481299336764976	0.5480550728512231	125	0	0.6015037593984962	46	0	0.5185646131507986	79	0	1.1949017525225705	44	0	unmethylated (<10%)	D5FM38	Zinc metalloproteinase nas-36 (EC 3.4.24.-) (Nematode astacin 36)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN015384	Chromosome_6A	6600	4	144	33.59090909090909	0.7767777454483635	0.5906608715033991	141	0	0.535128603486967	28	0	0.6058884786518981	113	0	0.48527443105756357	37	0	unmethylated (<10%)	Q21059	Zinc metalloproteinase nas-34 (EC 3.4.24.-) (Defective hatching protein 1) (Nematode astacin 34)	hatching [GO:0035188]; molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; neuron migration [GO:0001764]; proteolysis [GO:0006508]	hit with GO BP
GN015385	Chromosome_6A	348	1	10	39.6551724137931	0.7578397212543554	0.16501650165016502	10	0	0.16501650165016502	10	0	NA	NA	NA	0.6997261940979617	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015386	Chromosome_6A	5256	7	113	33.40943683409437	0.7705714986318751	0.5563282336578581	109	0	0.7926023778071334	25	0	0.4841638087552955	84	0	0.6877149109096593	50	0	unmethylated (<10%)	Q18206	Zinc metalloproteinase nas-36 (EC 3.4.24.-) (Nematode astacin 36)	molting cycle, collagen and cuticulin-based cuticle [GO:0018996]; proteolysis [GO:0006508]	hit with GO BP
GN015387	Chromosome_6A	32124	24	522	34.43842609886689	0.553605672521466	72.01692074387421	516	0.8217054263565892	76.93051749153635	102	0.9019607843137255	71.04575579913332	414	0.8019323671497585	27.2183908045977	42	0.2619047619047619	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015388	Chromosome_6A	1012	2	27	35.17786561264822	0.8637268847795163	0.5030743432084964	27	0	0.9433962264150944	6	0	0.3663003663003663	21	0	0.3995433789954338	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015389	Chromosome_6A	351	1	18	43.3048433048433	1.0945945945945945	0.9370816599732262	18	0	0.9370816599732262	18	0	NA	NA	NA	0.778642936596218	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015390	Chromosome_6A	743	2	6	42.395693135935396	0.18012121212121213	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015391	Chromosome_6A	5210	4	136	35.98848368522073	0.8080043241961123	0.45280390107976315	125	0	0.46635576282478347	25	0	0.4480075453902381	100	0	0.48767967145790553	32	0	unmethylated (<10%)	O53532	S-adenosylmethionine-dependent methyltransferase Rv2258c (EC 2.1.1.-)	cellular response to hypoxia [GO:0071456]	hit with GO BP
GN015392	Chromosome_6A	1394	2	48	38.88091822094692	0.9138986013986014	0.8333333333333334	48	0	0.8168028004667445	25	0	0.850546780072904	23	0	0.33382789317507416	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015393	Chromosome_6A	168	1	7	46.42857142857143	0.8071379547014413	0	6	0	0	6	0	NA	NA	NA	0.6375674350171653	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015394	Chromosome_6A	1294	4	32	37.635239567233384	0.7008564368166278	0.23980815347721823	19	0	0.8403361344537815	5	0	0	14	0	0	15	0	unmethylated (<10%)	P82596	Perlucin	NA	hit, no GO BP
GN015395	Chromosome_6A	5970	4	172	37.018425460636514	0.8412990632842322	0.6775067750677507	149	0	0.4672897196261682	39	0	0.7240380637153496	110	0	0.5548216644649934	64	0	unmethylated (<10%)	O53532	S-adenosylmethionine-dependent methyltransferase Rv2258c (EC 2.1.1.-)	cellular response to hypoxia [GO:0071456]	hit with GO BP
GN015396	Chromosome_6A	1394	2	47	38.37876614060258	0.9183135704874835	0.060240963855421686	45	0	0.13986013986013987	23	0	0	22	0	1.0155966630395357	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016133	Chromosome_6A	1449	2	16	36.09385783298827	0.3390465048259725	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN015397	Chromosome_6A	2848	4	30	36.41151685393258	0.31780984972474335	4.651162790697675	10	0	0	4	0	7.6923076923076925	6	0	27.559055118110237	33	0.18181818181818182	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015398	Chromosome_6A	948	1	29	38.924050632911396	0.8079228870342071	1.0037641154328734	29	0	1.0037641154328734	29	0	NA	NA	NA	0.7272727272727273	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015399	Chromosome_6A	3037	4	31	34.804082976621665	0.33735738447425756	0	1	0	NA	NA	NA	0	1	0	1.6025641025641026	14	0	NA	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN015400	Chromosome_6A	948	1	28	38.924050632911396	0.7798343028380046	0.3831417624521073	28	0	0.3831417624521073	28	0	NA	NA	NA	0.9025270758122743	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015401	Chromosome_6A	591	1	18	39.76311336717428	0.7706461895102868	0.6163328197226502	18	0	0.6163328197226502	18	0	NA	NA	NA	0.5878510777269759	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015402	Chromosome_6A	1095	1	35	39.45205479452055	0.8235736542387451	0.40214477211796246	32	0	0.40214477211796246	32	0	NA	NA	NA	0.23492560689115113	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015403	Chromosome_6A	1095	1	33	39.269406392694066	0.7837714731910463	0.7682458386683739	31	0	0.7682458386683739	31	0	NA	NA	NA	0.8121827411167513	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015404	Chromosome_6A	4522	4	129	35.20566121185316	0.9208583804809052	0.5571030640668524	129	0	0.11534025374855825	21	0	0.6177728496752732	108	0	0.6571741511500547	72	0	unmethylated (<10%)	P82596	Perlucin	NA	hit, no GO BP
GN015405	Chromosome_6A	459	1	18	43.57298474945534	0.8643163510827493	13.477366255144032	18	0	13.477366255144032	18	0	NA	NA	NA	2.008838891120932	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015406	Chromosome_6A	783	2	26	42.017879948914434	0.7534976682211859	0.6535947712418301	26	0	0.8032128514056225	16	0	0.47619047619047616	10	0	0.39804041641151255	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015407	Chromosome_6A	1853	2	82	43.01133297355639	0.9570075328143501	2.4790375501275976	81	0	1.2690355329949239	15	0	2.681992337164751	66	0	1.169004676018704	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015408	Chromosome_6A	576	1	24	42.88194444444444	0.9652283200670297	13.488114980652295	24	0	13.488114980652295	24	0	NA	NA	NA	1.2615643397813288	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019860	Chromosome_6A	574	1	8	41.81184668989547	0.35875	0	8	0	0	8	0	NA	NA	NA	0.3866976024748647	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015409	Chromosome_6A	3824	4	62	35.9571129707113	0.5041164863577601	82.27154046997389	62	0.8870967741935484	79.71014492753623	10	0.8	82.76721720162044	52	0.9038461538461539	20.015546055188494	69	0.10144927536231885	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015410	Chromosome_6A	607	2	25	40.691927512355846	0.9957349081364829	1.0057471264367817	25	0	1.238938053097345	21	0	0	4	0	0.49680624556423	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015411	Chromosome_6A	1877	5	33	31.16675546084177	0.7249139807597781	0.4181913225300575	33	0	0.4859086491739553	22	0	0.3393665158371041	11	0	1.291899441340782	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015412	Chromosome_6A	3549	9	82	34.82671174978867	0.7650255124170945	0.6268864638959832	82	0	0.672645739910314	45	0	0.5777563793933558	37	0	1.1708860759493671	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015413	Chromosome_6A	357	1	11	44.25770308123249	0.6357455075279261	0.8438818565400844	11	0	0.8438818565400844	11	0	NA	NA	NA	0.9334889148191365	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015414	Chromosome_6A	573	1	29	46.42233856893543	0.9420068027210884	1.0683760683760684	20	0	1.0683760683760684	20	0	NA	NA	NA	1.1352578657152124	99	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015415	Chromosome_6A	477	1	14	40.670859538784065	0.7173702868192072	1.309328968903437	14	0	1.309328968903437	14	0	NA	NA	NA	0.45558086560364464	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015416	Chromosome_6A	675	1	26	42.22222222222222	0.8660679036715357	0.3157894736842105	26	0	0.3157894736842105	26	0	NA	NA	NA	0.2303389272787101	61	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN015417	Chromosome_6A	459	1	14	40.08714596949891	0.761464628510487	0.13315579227696406	14	0	0.13315579227696406	14	0	NA	NA	NA	0.48599199542595767	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015418	Chromosome_6A	537	1	19	45.06517690875233	0.6973072717331875	1.070336391437309	19	0	1.070336391437309	19	0	NA	NA	NA	0.7686084142394822	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015419	Chromosome_6A	3427	3	58	38.25503355704698	0.46473228898760816	13.399314807765512	39	0	16.050632911392405	20	0	5.368098159509202	19	0	5.811623246492986	10	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015420	Chromosome_6A	336	1	3	41.07142857142857	0.2153846153846154	0	3	0	0	3	0	NA	NA	NA	0.7680491551459293	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015421	Chromosome_6A	1230	1	35	51.78861788617886	0.424681858538029	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015422	Chromosome_6A	930	1	32	38.60215053763441	0.9274495138369484	0.4370629370629371	32	0	0.4370629370629371	32	0	NA	NA	NA	0.9652509652509652	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015423	Chromosome_6A	213	1	11	46.009389671361504	0.9774718397997497	0.3656307129798903	11	0	0.3656307129798903	11	0	NA	NA	NA	0.35989717223650386	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015424	Chromosome_6A	930	1	30	39.13978494623656	0.8435374149659864	0.26490066225165565	30	0	0.26490066225165565	30	0	NA	NA	NA	0.7057785619761799	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015425	Chromosome_6A	2317	3	70	38.28226154510143	0.8250501063169567	0.5902777777777778	70	0	0.37091988130563797	40	0	0.783289817232376	30	0	0.38847523470378764	47	0	unmethylated (<10%)	P23654	Neurotactin	axon guidance [GO:0007411]; axonal fasciculation [GO:0007413]; axonogenesis [GO:0007409]; central nervous system development [GO:0007417]; heterophilic cell-cell adhesion [GO:0007157]	hit with GO BP
GN015426	Chromosome_6A	6879	9	210	35.68832679168484	0.960432257343907	0.5510469892796312	210	0	0.43782837127845886	69	0	0.584643367545797	141	0	0.4899559039686428	38	0	unmethylated (<10%)	P70665	Sialate O-acetylesterase (SIAE) (EC 3.1.1.53) (Sialic acid-specific 9-O-acetylesterase) (Yolk sac protein 2) [Cleaved into: Sialate O-acetylesterase small subunit; Sialate O-acetylesterase large subunit]	carbohydrate metabolic process [GO:0005975]; regulation of immune system process [GO:0002682]	hit with GO BP
GN015427	Chromosome_6A	672	1	19	38.095238095238095	0.7932898415657036	0.7470651013874067	18	0	0.7470651013874067	18	0	NA	NA	NA	0.7211538461538461	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015428	Chromosome_6A	633	1	32	44.707740916271725	1.01727601446364	0.6224066390041494	32	0	0.6224066390041494	32	0	NA	NA	NA	2.202643171806167	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015429	Chromosome_6A	1134	1	19	38.977072310405646	0.44347020685396726	19.743069641649765	19	0	19.743069641649765	19	0	NA	NA	NA	10.672116257947321	33	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015430	Chromosome_6A	1591	3	8	38.59208045254557	0.13762231713250797	13.996316758747698	8	0	15.803814713896458	3	0	10.227272727272727	5	0	20.171214553237025	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015431	Chromosome_6A	19316	9	502	34.810519776351214	0.8583885725616838	0.7317583106836714	499	0	0.8955223880597015	20	0	0.7223232273598349	479	0	0.5102040816326531	32	0	unmethylated (<10%)	P18293	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of smooth muscle cell proliferation [GO:0048662]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN015432	Chromosome_6A	552	1	47	64.85507246376811	0.8140060240963856	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015433	Chromosome_6A	4172	4	118	36.38542665388303	0.8549893016922777	0.7970342910101946	99	0	0.5093378607809848	15	0	0.8774009959686981	84	0	0.6005459508644222	43	0	unmethylated (<10%)	P83553	Dermatopontin (Tyrosine-rich acidic matrix protein) (TRAMP)	collagen fibril organization [GO:0030199]	hit with GO BP
GN015434	Chromosome_6A	3351	6	104	37.24261414503133	0.8976971820102004	0.5306916681408101	97	0	0.5518763796909493	36	0	0.5165289256198347	61	0	1.7317760773258155	50	0	unmethylated (<10%)	P06280	Alpha-galactosidase A (EC 3.2.1.22) (Alpha-D-galactosidase A) (Alpha-D-galactoside galactohydrolase) (Galactosylgalactosylglucosylceramidase GLA) (Melibiase) (Agalsidase)	glycoside catabolic process [GO:0016139]; glycosphingolipid catabolic process [GO:0046479]; glycosylceramide catabolic process [GO:0046477]; negative regulation of nitric oxide biosynthetic process [GO:0045019]; negative regulation of nitric-oxide synthase activity [GO:0051001]; oligosaccharide metabolic process [GO:0009311]	hit with GO BP
GN015435	Chromosome_6A	4683	3	94	33.674994661541746	0.7080594883079031	1.1773714942088638	89	0	0.46604527296937415	10	0	1.2968138624930128	79	0	0.47063253012048195	32	0	unmethylated (<10%)	Q01528	Hemagglutinin/amebocyte aggregation factor (18K-LAF)	collagen fibril organization [GO:0030199]	hit with GO BP
GN015436	Chromosome_6A	819	1	0	57.020757020757024	0	NA	0	NA	NA	NA	NA	NA	NA	NA	73.95770392749245	21	0.8095238095238095	NA	NA	NA	NA	no Swiss-Prot hit
GN015437	Chromosome_6A	31514	25	395	35.3271561845529	0.4045243574551632	83.80874847355732	385	0.935064935064935	87.1541057367829	62	1	83.26785974101557	323	0.9226006191950464	0.8440913604766633	59	0	methylated (>=50%)	Q6P3L0	Major vault protein (MVP)	brain development [GO:0007420]; cranial skeletal system development [GO:1904888]; eye development [GO:0001654]; neuron projection regeneration [GO:0031102]	hit with GO BP
GN015438	Chromosome_6A	1458	2	54	43.484224965706446	0.7892141138732959	0.7654836464857342	51	0	0.7845934379457917	50	0	0	1	0	0.4117344312918168	57	0	unmethylated (<10%)	O34355	Putative amidohydrolase YtcJ (EC 3.5.-.-)	NA	hit, no GO BP
GN015439	Chromosome_6A	384	1	19	44.010416666666664	1.0348936170212766	0.5291005291005291	19	0	0.5291005291005291	19	0	NA	NA	NA	0.5343307507347048	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015440	Chromosome_6A	1899	1	76	43.81253291205898	0.8399182918099761	0.46153846153846156	72	0	0.46153846153846156	72	0	NA	NA	NA	0.5484460694698354	49	0	unmethylated (<10%)	O34355	Putative amidohydrolase YtcJ (EC 3.5.-.-)	NA	hit, no GO BP
GN015441	Chromosome_6A	1401	1	34	45.25339043540328	0.4833338406745609	0.3875968992248062	14	0	0.3875968992248062	14	0	NA	NA	NA	0.4562422231439237	49	0	unmethylated (<10%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN015442	Chromosome_6A	731	3	20	38.03009575923392	0.7568463011854842	0.1693480101608806	20	0	0.21141649048625794	16	0	0	4	0	0.5516154452324665	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015443	Chromosome_6A	762	2	19	37.664041994750654	0.7045255474452555	0.36496350364963503	19	0	0.234192037470726	16	0	0.8264462809917356	3	0	0.3814713896457766	35	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015444	Chromosome_6A	703	3	18	37.9800853485064	0.7104997192588434	0.1932367149758454	18	0	0.14705882352941177	13	0	0.28169014084507044	5	0	0.6984387838948234	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015445	Chromosome_6A	732	2	18	37.431693989071036	0.7057689217419251	0.6903353057199211	18	0	0.7518796992481203	15	0	0.46296296296296297	3	0	0.44759418127564343	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015446	Chromosome_6A	396	1	13	43.43434343434343	0.697560975609756	0.3527336860670194	13	0	0.3527336860670194	13	0	NA	NA	NA	1.044776119402985	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015447	Chromosome_6A	756	2	21	37.83068783068783	0.7765223771093177	0.3404255319148936	21	0	0.3225806451612903	18	0	0.40816326530612246	3	0	0.6490496059341678	36	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015448	Chromosome_6A	2596	3	54	38.7904468412943	0.5545033819864721	2.2685693377241125	54	0	2.8816199376947043	28	0	1.725327812284334	26	0	1.1299435028248588	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015449	Chromosome_6A	762	2	19	37.13910761154855	0.7246246246246246	0.29282576866764276	19	0	0.2664298401420959	17	0	0.4166666666666667	2	0	0.3460207612456747	40	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015450	Chromosome_6A	762	2	15	36.876640419947506	0.5796146044624746	0.21621621621621623	15	0	0.26525198938992045	13	0	0	2	0	0.2731174404994147	37	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015451	Chromosome_6A	703	3	18	38.12233285917497	0.704879679144385	0.2635046113306983	18	0	0.19607843137254902	13	0	0.40160642570281124	5	0	0.578642819568648	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015452	Chromosome_6A	762	2	20	37.664041994750654	0.7421114141020647	0.5003126954346466	20	0	0.4676539360872954	17	0	0.6329113924050633	3	0	0.4742436631234669	43	0	unmethylated (<10%)	P83425	Heavy metal-binding protein HIP	NA	hit, no GO BP
GN015453	Chromosome_6A	1608	3	50	37.93532338308458	0.8652138821630347	4.1900486344930785	50	0	0.5813953488372093	16	0	5.44080604534005	34	0	0.7583965330444203	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015454	Chromosome_6A	714	2	17	36.83473389355742	0.7073426573426573	0.2188183807439825	17	0	0.3125	13	0	0	4	0	0.7678244972577697	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015455	Chromosome_6A	1722	1	29	42.27642276422764	0.3804191329387298	0.39267015706806285	28	0	0.39267015706806285	28	0	NA	NA	NA	0.7936507936507936	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015456	Chromosome_6A	7486	14	80	35.90702644937216	0.3344369917870611	59.33350037584565	76	0.6578947368421053	52.79685966633955	29	0.5517241379310345	61.57469717362046	47	0.723404255319149	52.00698080279232	12	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015457	Chromosome_6A	2324	3	37	36.876075731497416	0.48331759521561224	76.87986171132239	37	0.918918918918919	70.6959706959707	5	1	77.70700636942675	32	0.90625	65.50825369244136	25	0.8	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015458	Chromosome_6A	4736	7	71	36.760979729729726	0.44973852100525635	71.33779264214047	67	0.835820895522388	69.72343522561863	12	0.6666666666666666	71.81936604429005	55	0.8727272727272727	64.73740621650589	25	0.76	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015459	Chromosome_6A	649	3	5	37.134052388289675	0.235759953501889	64.85355648535565	5	0.8	77.30496453900709	3	1	46.93877551020408	2	0.5	66.70854271356784	14	0.6428571428571429	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015460	Chromosome_6A	1412	5	9	34.419263456090654	0.21626957113682777	60.7773851590106	9	0.7777777777777778	60.625	7	0.8571428571428571	61.627906976744185	2	0.5	43.55555555555556	50	0.48	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015461	Chromosome_6A	481	2	29	57.7962577962578	0.8502895458701616	0.9259259259259259	16	0	1.0830324909747293	15	0	0	1	0	0	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015462	Chromosome_6A	5250	4	144	37.96190476190476	0.7616422457565646	0.6235154394299287	144	0	0	15	0	0.6861623917660513	129	0	0.6009190526687875	56	0	unmethylated (<10%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN015463	Chromosome_6A	23473	8	600	34.0604098325736	0.8822647237690403	2.21372574219252	586	0	0.36443148688046645	29	0	2.299005108900242	557	0	0.6402048655569782	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015464	Chromosome_6A	2796	6	33	33.69098712446352	0.418363599265456	2.695871946082561	27	0	5.555555555555555	8	0	0.9497964721845319	19	0	2.770330652368186	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015465	Chromosome_6A	711	1	21	39.943741209563996	0.751245283018868	0.20304568527918782	21	0	0.20304568527918782	21	0	NA	NA	NA	0.5620608899297423	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015466	Chromosome_6A	8635	2	162	40.98436595251882	0.5553663138035845	0.8131305526276164	158	0	0.8506616257088847	32	0	0.8060182697474476	126	0	0.8306414397784956	62	0	unmethylated (<10%)	Q7Z5L3	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1q/TNF-related protein 10)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; regulation of synapse maturation [GO:0090128]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN015467	Chromosome_6A	432	1	26	46.06481481481482	1.1359223300970873	0.11947431302270012	26	0	0.11947431302270012	26	0	NA	NA	NA	0.4132231404958678	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015468	Chromosome_6A	1998	2	55	36.786786786786784	0.8143257302921169	0.5113900511390052	55	0	0.5995203836930456	26	0	0.45558086560364464	29	0	0.5949161709031909	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015469	Chromosome_6A	636	1	19	40.25157232704402	0.7492559523809523	0.2361275088547816	19	0	0.2361275088547816	19	0	NA	NA	NA	0.6153846153846154	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015470	Chromosome_6A	2713	2	76	38.18650939918909	0.7688418226564248	0.5603164139749506	76	0	0.4527447651386531	41	0	0.7103393843725335	35	0	0.5974395448079659	64	0	unmethylated (<10%)	P02746	Complement C1q subcomponent subunit B	complement activation [GO:0006956]; complement activation, classical pathway [GO:0006958]; synapse pruning [GO:0098883]	hit with GO BP
GN015471	Chromosome_6A	876	1	8	38.013698630136986	0.2529781243231536	NA	0	NA	NA	NA	NA	NA	NA	NA	63.23529411764706	5	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN015472	Chromosome_6A	2898	3	25	31.677018633540374	0.34430319591303316	76.60550458715596	7	1	NA	NA	NA	76.60550458715596	7	1	0	10	0	methylated (>=50%)	Q9FT72	ATP-dependent DNA helicase Q-like 3 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ3) (RecQ-like protein 3) (AtRecQ3) (AtRecQl3)	DNA recombination [GO:0006310]; DNA replication [GO:0006260]	hit with GO BP
GN015473	Chromosome_6A	174	1	12	51.14942528735632	1.0577507598784195	8.333333333333334	3	0	8.333333333333334	3	0	NA	NA	NA	3.1073446327683616	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015474	Chromosome_6A	698	3	11	36.81948424068768	0.4649951550387597	7.906976744186046	11	0	9.392265193370166	10	0	0	1	0	8.56394913986537	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015475	Chromosome_6A	1116	1	0	48.2078853046595	0	NA	0	NA	NA	NA	NA	NA	NA	NA	71.3715710723192	29	0.8275862068965517	NA	NA	NA	NA	no Swiss-Prot hit
GN015476	Chromosome_6A	5073	4	50	35.89591957421644	0.3101310705727002	67.5626589175445	50	0.92	76.74418604651163	15	1	64.99302649930264	35	0.8857142857142857	80.74534161490683	5	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015477	Chromosome_6A	23638	8	402	34.72374989423809	0.5663551134501111	81.41617558349961	377	0.9230769230769231	71.03064066852367	24	0.8333333333333334	81.96248901045229	353	0.9291784702549575	0.6119510439164867	48	0	methylated (>=50%)	Q6DFR0	Toll-interacting protein	phosphorylation [GO:0016310]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN015478	Chromosome_6A	2619	3	31	33.180603283696065	0.43232089798613405	0.4851004851004851	31	0	0.273972602739726	12	0	0.5565862708719852	19	0	2.7288732394366195	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015479	Chromosome_6A	4557	7	132	37.28330041694097	0.8379312074086044	0.9254118082546733	130	0	0.6512729425695678	43	0	1.050080775444265	87	0	0.7147719537100068	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015480	Chromosome_6A	4984	3	130	37.359550561797754	0.7477981665141262	0.6970260223048327	130	0	0.36231884057971014	47	0	0.8399646330680813	83	0	1.1712022046159145	42	0	unmethylated (<10%)	Q5RJ80	Caprin-2 (RNA granule protein 140)	dorsal/ventral axis specification [GO:0009950]; dorsal/ventral pattern formation [GO:0009953]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of dendritic spine morphogenesis [GO:0061003]; positive regulation of Wnt signaling pathway [GO:0030177]	hit with GO BP
GN003576	Chromosome_6A	752	1	27	46.808510638297875	0.6554963680387409	0.5154639175257731	18	0	0.5154639175257731	18	0	NA	NA	NA	0.7075471698113207	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015481	Chromosome_6A	16210	10	432	35.101789019124	0.8652879498861723	1.216520139030873	425	0	0.8177008177008177	61	0	1.2639405204460967	364	0	0.8631319358816276	55	0	unmethylated (<10%)	A0A8M9Q308	Choline/ethanolamine transporter flvcr2b (Feline leukemia virus subgroup C receptor-related protein 2 homolog B) (Heme transporter flvcr2b) (Major facilitator superfamily domain containing 7C-b)	transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN015482	Chromosome_6A	4143	5	145	38.595220854453295	0.9411041310920684	0.739247311827957	145	0	0.6770833333333334	52	0	0.7688492063492064	93	0	0.7004532344458179	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015483	Chromosome_6A	267	1	11	42.32209737827716	0.9235849056603773	0.45146726862302483	11	0	0.45146726862302483	11	0	NA	NA	NA	1.0488100040338846	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015484	Chromosome_6A	21926	6	490	35.05427346529235	0.7281675921251893	0.7217923547753782	358	0	0.7895959126799814	45	0	0.712166172106825	313	0	0.4219409282700422	41	0	unmethylated (<10%)	A1L1W9	Monocarboxylate transporter 10 (MCT 10) (Solute carrier family 16 member 10)	aromatic amino acid transport [GO:0015801]; thyroid hormone transport [GO:0070327]	hit with GO BP
GN015485	Chromosome_6A	564	1	36	46.09929078014184	1.201491212497781	0	33	0	0	33	0	NA	NA	NA	2.4390243902439024	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015486	Chromosome_6A	282	1	14	43.262411347517734	1.0621468926553672	10.077519379844961	14	0	10.077519379844961	14	0	NA	NA	NA	7.177154409906495	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015487	Chromosome_6A	1093	2	19	36.77950594693504	0.5144803666542797	48.08259587020649	19	0.3684210526315789	47.293447293447294	14	0.35714285714285715	50.82508250825082	5	0.4	54.01234567901235	32	0.625	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015488	Chromosome_6A	961	2	31	38.50156087408949	0.8735338963171475	0.7106598984771574	31	0	0.8287292817679558	18	0	0.5656108597285068	13	0	0.833472245374229	85	0	unmethylated (<10%)	Q5R5H7	Solute carrier family 22 member 2 (Organic cation transporter 2)	acetylcholine transport [GO:0015870]; choline transport [GO:0015871]; dopamine uptake [GO:0090494]; histamine transport [GO:0051608]; prostaglandin transport [GO:0015732]; purine-containing compound transmembrane transport [GO:0072530]; putrescine transport [GO:0015847]; serotonin uptake [GO:0051610]; spermidine transport [GO:0015848]; thiamine transmembrane transport [GO:0071934]	hit with GO BP
GN015489	Chromosome_6A	1221	1	19	37.18263718263718	0.4576822916666667	92.98418972332016	19	1	92.98418972332016	19	1	NA	NA	NA	87.14568226763349	29	0.9655172413793104	methylated (>=50%)	Q5UQ22	Putative helicase L207/L206 (EC 3.6.4.-)	NA	hit, no GO BP
GN015490	Chromosome_6A	663	1	8	40.874811463046754	0.2895512610547003	31.568228105906314	8	0	31.568228105906314	8	0	NA	NA	NA	4.034171808258187	19	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015491	Chromosome_6A	3016	7	77	37.234748010610076	0.7377690802348337	1.0977657238796332	70	0	1.16580310880829	36	0	1.0301313417460727	34	0	1.6165133051479732	31	0	unmethylated (<10%)	Q54KD0	TPR repeat-containing protein DDB_G0287407	NA	hit, no GO BP
GN003239	Chromosome_6A	310	1	2	37.74193548387097	0.1834319526627219	0	2	0	0	2	0	NA	NA	NA	0.7466401194624191	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015492	Chromosome_6A	3375	3	33	35.25925925925926	0.3146284206571391	0.32930845225027444	17	0	0	7	0	0.47244094488188976	10	0	0.3171247357293869	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015493	Chromosome_6A	1687	2	12	37.225844694724366	0.20708915145005372	0	7	0	0	7	0	NA	NA	NA	1.0355029585798816	25	0	unmethylated (<10%)	Q57YG0	ATP-dependent DNA helicase PIF7 (EC 5.6.2.3) (DNA 5'-3' helicase PIF7) (DNA repair and recombination helicase PIF7)	chromosome organization [GO:0051276]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; telomere maintenance [GO:0000723]	hit with GO BP
GN015494	Chromosome_6A	2112	1	70	39.96212121212121	0.8429695518303113	0.6462585034013606	70	0	0.6462585034013606	70	0	NA	NA	NA	3.874655939021808	46	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN015495	Chromosome_6A	771	1	21	37.094682230869005	0.7973898054666338	0.6194690265486725	21	0	0.6194690265486725	21	0	NA	NA	NA	0.8928571428571429	42	0	unmethylated (<10%)	G3X987	GTPase IMAP family member 9 (Immune-associated nucleotide-binding protein 7) (IAN-7) (Immunity-associated nucleotide-binding protein 7)	NA	hit, no GO BP
GN015496	Chromosome_6A	7282	3	143	34.72946992584455	0.6541041766646483	2.360939431396786	143	0	0.8574007220216606	42	0	2.9281579843377594	101	0	0.4876727174207532	53	0	unmethylated (<10%)	G3X987	GTPase IMAP family member 9 (Immune-associated nucleotide-binding protein 7) (IAN-7) (Immunity-associated nucleotide-binding protein 7)	NA	hit, no GO BP
GN015497	Chromosome_6A	899	2	31	42.60289210233593	0.7725937014859171	0.8450704225352113	31	0	0.847457627118644	29	0	0.8264462809917356	2	0	1.5697921086126432	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015498	Chromosome_6A	753	1	3	52.191235059760956	0.058705821205821206	1.8181818181818181	2	0	1.8181818181818181	2	0	NA	NA	NA	1.3004791238877482	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN015499	Chromosome_6A	5834	11	62	34.98457319163524	0.3473259279744346	1.9237495627841903	62	0.016129032258064516	0.5215123859191656	18	0	2.4378585086042066	44	0.022727272727272728	0.9523809523809523	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015500	Chromosome_6A	5933	16	45	33.574919939322434	0.27008148421654266	7.341650671785029	38	0	9.399477806788513	9	0	7.133421400264201	29	0	0.6915629322268326	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015501	Chromosome_6A	9942	5	166	35.86803460068397	0.5243595914729754	15.561997628146	63	0	16.694098283564543	18	0	15.121281464530892	45	0	22.019423978566643	26	0	sparse (10-50%)	Q9NRJ4	Tubby-related protein 4 (Tubby superfamily protein) (Tubby-like protein 4)	protein ubiquitination [GO:0016567]	hit with GO BP
GN015502	Chromosome_6A	5732	10	115	37.78785764131193	0.5626356593117234	2.8887479743535547	80	0	1.1446968341978179	20	0	4.022320390606835	60	0	20.03076923076923	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015503	Chromosome_6A	1080	1	55	43.425925925925924	1.0803142732431252	1.1406844106463878	13	0	1.1406844106463878	13	0	NA	NA	NA	1.2428793371310203	46	0	unmethylated (<10%)	A1ZAX0	Neuropeptide CCHamide-1 receptor	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN015504	Chromosome_6A	201	1	8	41.29353233830846	0.9348837209302325	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015505	Chromosome_6A	1035	1	51	43.18840579710145	1.0568413886997958	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	A1ZAX0	Neuropeptide CCHamide-1 receptor	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN015506	Chromosome_6A	45893	12	709	34.96611683699039	0.5057019999467848	85.74481346273707	585	0.9504273504273504	72.06982543640898	29	0.7586206896551724	86.42837109289788	556	0.960431654676259	0.7285974499089253	64	0	methylated (>=50%)	Q9GZN1	Actin-related protein 6 (hArp6) (hARPX)	chromatin remodeling [GO:0006338]; negative regulation of transcription by RNA polymerase I [GO:0016479]; nucleolus organization [GO:0007000]; positive regulation of transcription by RNA polymerase I [GO:0045943]; regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN020179	Chromosome_6A	1270	2	25	35.43307086614173	0.6427125506072875	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN015507	Chromosome_6A	1270	2	12	36.53543307086614	0.2834030683403068	93.76811594202898	12	1	94.70899470899471	6	1	92.62820512820512	6	1	82.64937274080374	76	0.9868421052631579	methylated (>=50%)	Q9CXG3	Peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) (EC 5.2.1.8) (Cyclophilin-like protein PPIL4) (Rotamase PPIL4)	NA	hit, no GO BP
GN015508	Chromosome_6A	1925	2	22	37.97402597402598	0.3476497726116009	95.28598365807669	22	1	94.61883408071749	4	1	95.39473684210526	18	1	93.86470896696382	30	1	methylated (>=50%)	G5EEW6	Peptidyl-prolyl cis-trans isomerase sig-7 (EC 5.2.1.8) (Cyclophilin-like protein sig-7) (Silencer in germline 7)	nematode larval development [GO:0002119]; positive regulation of gastrulation [GO:2000543]; positive regulation of oocyte development [GO:0060282]; positive regulation of vulval development [GO:0040026]; transcription elongation-coupled chromatin remodeling [GO:0140673]	hit with GO BP
GN015509	Chromosome_6A	237	1	13	41.77215189873418	1.2575510204081632	90.04484304932735	13	1	90.04484304932735	13	1	NA	NA	NA	92.38033912856837	50	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015510	Chromosome_6A	1291	2	44	45.54608830364059	0.6660881801125703	0.40858018386108275	42	0	0.4291845493562232	40	0	0	2	0	0.9746588693957114	40	0	unmethylated (<10%)	Q9XTL9	Glycogen phosphorylase (EC 2.4.1.1)	defense response to Gram-negative bacterium [GO:0050829]; determination of adult lifespan [GO:0008340]; glycogen catabolic process [GO:0005980]; insulin receptor signaling pathway [GO:0008286]; negative regulation of innate immune response [GO:0045824]	hit with GO BP
GN015511	Chromosome_6A	2862	2	93	40.006988120195665	0.8123584600452928	13.706896551724139	92	0.11956521739130435	17.565597667638485	52	0.1346153846153846	11.195445920303605	40	0.1	0.8398656215005599	63	0	sparse (10-50%)	P79334	Glycogen phosphorylase, muscle form (EC 2.4.1.1) (Myophosphorylase)	glycogen catabolic process [GO:0005980]	hit with GO BP
GN015512	Chromosome_6A	37759	23	704	36.102651023597026	0.5728283218671787	89.78533429572005	649	0.9399075500770416	94.49286846275753	51	1	89.44471519078061	598	0.9347826086956522	94.51345755693582	20	1	methylated (>=50%)	P50416	Carnitine O-palmitoyltransferase 1, liver isoform (CPT1-L) (EC 2.3.1.21) (Carnitine O-palmitoyltransferase I, liver isoform) (CPT I) (CPTI-L) (Carnitine palmitoyltransferase 1A) (Succinyltransferase CPT1A) (EC 2.3.1.-)	carnitine metabolic process [GO:0009437]; carnitine shuttle [GO:0006853]; cellular response to fatty acid [GO:0071398]; eating behavior [GO:0042755]; epithelial cell differentiation [GO:0030855]; fatty acid beta-oxidation [GO:0006635]; fatty acid metabolic process [GO:0006631]; glucose metabolic process [GO:0006006]; liver regeneration [GO:0097421]; long-chain fatty acid metabolic process [GO:0001676]; positive regulation of fatty acid beta-oxidation [GO:0032000]; positive regulation of innate immune response [GO:0045089]; regulation of insulin secretion [GO:0050796]; response to alkaloid [GO:0043279]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; response to nutrient [GO:0007584]; response to tetrachloromethane [GO:1904772]; response to xenobiotic stimulus [GO:0009410]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN015513	Chromosome_6A	6624	9	73	32.971014492753625	0.42266166927724325	91.84222321828776	73	1	91.73652694610779	32	1	91.9054441260745	41	1	92.05933682373472	21	1	methylated (>=50%)	Q5ZIA5	Coatomer subunit beta (Beta-coat protein) (Beta-COP)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]	hit with GO BP
GN015514	Chromosome_6A	11885	3	255	36.28944047118216	0.6533429480546358	0.9196751785539575	255	0	0.8953168044077136	46	0	0.9237085186452275	209	0	1.4251061249241965	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015515	Chromosome_6A	279	1	11	51.61290322580645	0.6061623543353742	61.91588785046729	11	0.8181818181818182	61.91588785046729	11	0.8181818181818182	NA	NA	NA	23.3523611831863	40	0.175	methylated (>=50%)	Q5EB30	Ciliary microtubule associated protein 1A (Outer dense fiber of sperm tails protein 3) (Outer dense fiber protein 3)	NA	hit, no GO BP
GN015516	Chromosome_6A	4286	6	123	39.19738684087727	0.7503512080560795	1.7716931749547011	122	0	3.3962264150943398	43	0	1.0068107787977494	79	0	64.15792720542875	29	0.8275862068965517	unmethylated (<10%)	Q96PU9	Ciliary microtubule associated protein 1A (Outer dense fiber of sperm tails protein 3) (Outer dense fiber protein 3) (Sperm tail protein SHIPPO 1) (Transcript induced in spermiogenesis protein 50)	flagellated sperm motility [GO:0030317]	hit with GO BP
GN015517	Chromosome_6A	12984	12	230	37.73105360443623	0.5003729775268474	74.95274102079395	225	0.8	77.01711491442543	86	0.7790697674418605	73.85128279460791	139	0.8129496402877698	0.609942055504727	47	0	methylated (>=50%)	Q9LJN4	Probable beta-D-xylosidase 5 (AtBXL5) (EC 3.2.1.-)	xylan catabolic process [GO:0045493]	hit with GO BP
GN015518	Chromosome_6A	10773	5	137	33.24050867910517	0.4613041154462854	58.92619076475579	137	0.5985401459854015	63.20455984800507	34	0.5294117647058824	57.9136690647482	103	0.6213592233009708	32.08502024291498	31	0.3548387096774194	methylated (>=50%)	P25169	Sodium/potassium-transporting ATPase subunit beta (Sodium/potassium-dependent ATPase beta subunit)	intracellular potassium ion homeostasis [GO:0030007]; intracellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]	hit with GO BP
GN015519	Chromosome_6A	11190	7	209	36.68453976764969	0.5594764430971327	77.84992784992785	206	0.8737864077669902	76.83823529411765	26	0.8846153846153846	77.99136513157895	180	0.8722222222222222	34.060402684563755	36	0.3611111111111111	methylated (>=50%)	Q4PMB3	Small ribosomal subunit protein eS4 (40S ribosomal protein S4)	translation [GO:0006412]	hit with GO BP
GN015520	Chromosome_6A	1635	1	45	41.40672782874618	0.6457799389109293	0.6301693580149665	44	0	0.6301693580149665	44	0	NA	NA	NA	1.82832352029749	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015521	Chromosome_6A	5349	3	29	35.29631706861095	0.17464254351399428	40.0887573964497	16	0.4375	10.75268817204301	1	0	44.76843910806175	15	0.4666666666666667	67.53731343283582	25	0.8	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015522	Chromosome_6A	6728	9	64	34.48275862068966	0.32363877153278803	49.47735191637631	26	0.46153846153846156	44.30379746835443	6	0.16666666666666666	50.303030303030305	20	0.55	23.381294964028775	36	0.16666666666666666	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015523	Chromosome_6A	1239	1	29	38.4180790960452	0.6375831780676071	1.279317697228145	29	0	1.279317697228145	29	0	NA	NA	NA	0.7959479015918958	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015524	Chromosome_6A	3397	2	103	41.654400942007655	0.6991052661024129	0.48756704046806437	103	0	0.45265937382119953	67	0	0.5513439007580979	36	0	0.5326231691078562	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015525	Chromosome_6A	1371	2	47	37.70970094821298	0.9698233045362873	0.3811944091486658	47	0	0.42293233082706766	44	0	0	3	0	1.079913606911447	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015526	Chromosome_6A	1506	3	49	36.71978751660026	0.9653088454595401	0.5030181086519114	49	0	0.32175032175032175	29	0	1.152073732718894	20	0	0.6765899864682002	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015527	Chromosome_6A	1419	2	29	44.60887949260042	0.41697233762285946	64.02116402116403	29	0.896551724137931	57.4370709382151	15	0.8	68.14921090387375	14	1	88.11601037491158	58	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020035	Chromosome_6A	9247	5	134	35.96842219098086	0.44980366660822224	47.27801268498943	134	0.6417910447761194	26.421108553214097	52	0.38461538461538464	67.92287467134094	82	0.8048780487804879	0.6619144602851323	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015528	Chromosome_6A	14639	13	491	36.36860441286973	1.0143484227869448	0.5651699407545994	491	0	0.6611570247933884	64	0	0.5523397110158632	427	0	0.5162241887905604	69	0	unmethylated (<10%)	Q8R116	Palmitoleoyl-protein carboxylesterase NOTUM (EC 3.1.1.98)	bone development [GO:0060348]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of Wnt signaling pathway [GO:0030178]; protein depalmitoleylation [GO:1990697]; regulation of bone mineralization [GO:0030500]	hit with GO BP
GN015529	Chromosome_6A	579	1	22	39.37823834196891	0.993061510875497	0.6476683937823834	22	0	0.6476683937823834	22	0	NA	NA	NA	0.6283662477558348	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015530	Chromosome_6A	288	1	7	42.361111111111114	0.5675675675675675	37.362637362637365	7	0	37.362637362637365	7	0	NA	NA	NA	38.802931596091206	21	0.2857142857142857	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015531	Chromosome_6A	258	1	10	41.86046511627907	0.9046283309957924	0.5089058524173028	10	0	0.5089058524173028	10	0	NA	NA	NA	8.062645011600928	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015532	Chromosome_6A	1219	2	29	38.31009023789992	0.6484042553191489	0.4830917874396135	29	0	0.3451251078515962	25	0	1.0344827586206897	4	0	0.6469500924214417	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015533	Chromosome_6A	183	1	10	45.3551912568306	1.063953488372093	0.8695652173913043	10	0	0.8695652173913043	10	0	NA	NA	NA	1.5375689004931825	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019334	Chromosome_7A	10718	8	303	36.86322075013995	0.8329586043770189	3.8815374921235035	301	0.0033222591362126247	1.3631937682570594	31	0	4.255935147654893	270	0.003703703703703704	78.0241935483871	13	0.6923076923076923	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019335	Chromosome_7A	2399	2	47	37.93247186327636	0.5556278304234485	61.815490873211644	47	0.6170212765957447	51.33614627285513	31	0.41935483870967744	86.44628099173553	16	1	0.8883248730964467	61	0	methylated (>=50%)	Q28HX4	Intraflagellar transport protein 57 homolog	apoptotic process [GO:0006915]; intraciliary transport [GO:0042073]; non-motile cilium assembly [GO:1905515]; regulation of apoptotic process [GO:0042981]	hit with GO BP
GN019336	Chromosome_7A	60674	29	827	35.539110656953554	0.43300670439249833	87.00551109768986	793	0.9634300126103404	91.34571816946081	69	0.9710144927536232	86.61107679637637	724	0.962707182320442	91.94097616345063	16	1	methylated (>=50%)	Q9HCM2	Plexin-A4	axon guidance [GO:0007411]; branchiomotor neuron axon guidance [GO:0021785]; embryonic heart tube development [GO:0035050]; facial nerve structural organization [GO:0021612]; maintenance of synapse structure [GO:0099558]; motor neuron axon guidance [GO:0008045]; negative chemotaxis [GO:0050919]; regulation of axon extension involved in axon guidance [GO:0048841]; regulation of cell migration [GO:0030334]; regulation of chemotaxis [GO:0050920]; semaphorin-plexin signaling pathway [GO:0071526]; sympathetic neuron axon guidance [GO:0097492]; synapse assembly [GO:0007416]; telencephalon development [GO:0021537]; trigeminal nerve structural organization [GO:0021637]	hit with GO BP
GN019339	Chromosome_7A	6363	3	75	34.66918120383467	0.39338388034898214	67.22853782830262	73	0.6575342465753424	57.10512414157422	34	0.5588235294117647	73.2003739482705	39	0.7435897435897436	0.8639308855291576	43	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019337	Chromosome_7A	16307	12	196	36.015208192800635	0.37185069532105297	80	155	0.8838709677419355	91.00961538461539	73	0.9726027397260274	74.23899371069183	82	0.8048780487804879	4.227941176470588	32	0.09375	methylated (>=50%)	Q58A42	Protein DD3-3	NA	hit, no GO BP
GN002492	Chromosome_7A	512	1	6	43.359375	0.26051560379918587	90.74074074074075	3	1	90.74074074074075	3	1	NA	NA	NA	60.352422907488986	16	0.6875	NA	NA	NA	NA	no Swiss-Prot hit
GN001663	Chromosome_7A	414	1	6	39.371980676328505	0.40788177339901477	79.32692307692308	6	1	79.32692307692308	6	1	NA	NA	NA	76.13104524180967	22	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019341	Chromosome_7A	37327	14	618	35.93913253141158	0.5164284898754156	67.10077519379846	611	0.7054009819967266	83.7732583297274	45	0.9333333333333333	65.93896996743457	566	0.6872791519434629	8.262633714496495	43	0.023255813953488372	methylated (>=50%)	Q4JL91	Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol-1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase)	determination of left/right symmetry [GO:0007368]; epithelial cilium movement involved in determination of left/right asymmetry [GO:0060287]; melanosome transport [GO:0032402]	hit with GO BP
GN019342	Chromosome_7A	1394	2	16	35.22238163558106	0.3701908713692946	5.209656925031767	14	0	4.040404040404041	9	0	5.918367346938775	5	0	5.014464802314368	46	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN001409	Chromosome_7A	6649	7	54	34.08031282899684	0.2867768099967652	64.02946828955798	53	0.71698113207547165	72.6537216828479	11	0.8181818181818182	61.90095846645367	42	0.6904761904761905	0.5323868677905945	19	0	methylated (>=50%)	Q9NWV4	CXXC motif containing zinc binding protein (UPF0587 protein C1orf123)	NA	hit, no GO BP
GN001410	Chromosome_7A	8047	7	101	35.851870262209516	0.3908159006278082	85.12434755910347	101	0.9603960396039604	84.85915492957747	14	1	85.14968045745039	87	0.9540229885057471	86.10763454317897	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021198	Chromosome_7A	5762	1	70	46.077750780978825	0.2714072885783383	8.590909090909092	61	0.01639344262295082	8.590909090909092	61	0.01639344262295082	NA	NA	NA	18.599656357388316	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020169	Chromosome_7A	1412	3	24	38.243626062322946	0.4742498880429915	3.7656903765690375	20	0	9.047619047619047	10	0	1.5779092702169626	10	0	10.15299026425591	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001408	Chromosome_7A	12303	9	142	35.68235389742339	0.36349847195589646	64.7467081792826	127	0.7559055118110236	39.6	40	0.45	74.31718456165487	87	0.896551724137931	12.12624584717608	14	0.07142857142857142	methylated (>=50%)	Q9I9A7	DNA replication factor Cdt1 (XCDT1)	DNA replication checkpoint signaling [GO:0000076]; DNA replication preinitiation complex assembly [GO:0071163]; mitotic cell cycle [GO:0000278]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN019332	Chromosome_7A	13077	13	224	35.11508755830848	0.5581101843722563	94.9015873015873	224	1	94.23592493297588	35	1	95.01184132622853	189	1	94.71577261809448	35	1	methylated (>=50%)	O76924	Potential E3 ubiquitin-protein ligase ariadne-2 (EC 2.3.2.31) (Protein ariadne-2) (RING-type E3 ubiquitin transferase ariadne-2)	protein polyubiquitination [GO:0000209]	hit with GO BP
GN019333	Chromosome_7A	11563	11	363	36.919484562829716	0.9215350189845432	1.3493166550845495	361	0	1.270730131380573	118	0	1.378217821782178	243	0	2.7777777777777777	50	0	unmethylated (<10%)	Q61704	Inter-alpha-trypsin inhibitor heavy chain H3 (ITI heavy chain H3) (ITI-HC3) (Inter-alpha-inhibitor heavy chain 3)	hyaluronan metabolic process [GO:0030212]	hit with GO BP
GN019331	Chromosome_7A	7033	2	182	34.87843025735817	0.8565339179149921	0.6217923410975128	182	0	1.118881118881119	48	0	0.5401057228223397	134	0	0.34393809114359414	86	0	unmethylated (<10%)	P91685	Metabotropic glutamate receptor (DmGluRA)	G protein-coupled glutamate receptor signaling pathway [GO:0007216]; learning [GO:0007612]; long-term memory [GO:0007616]; male courtship behavior [GO:0008049]; neuromuscular junction development [GO:0007528]; regulation of synaptic transmission, glutamatergic [GO:0051966]; short-term memory [GO:0007614]; terminal button organization [GO:0072553]	hit with GO BP
GN019330	Chromosome_7A	7955	7	107	35.90194846008799	0.42883124800052397	73.74562427071179	107	0.9252336448598131	89.02877697841727	38	1	69.52853598014889	69	0.8840579710144928	24.114671163575043	46	0.2826086956521739	methylated (>=50%)	Q9VIW7	RNA-splicing ligase RtcB (EC 6.5.1.8) (3'-phosphate/5'-hydroxy nucleic acid ligase)	positive regulation of tRNA processing [GO:2000237]; tRNA processing [GO:0008033]; tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]	hit with GO BP
GN019329	Chromosome_7A	2692	3	87	37.77860326894502	0.9092476123922665	0.600739371534196	87	0	0.42656916514320536	33	0	0.7071082992184593	54	0	0.8157099697885196	64	0	unmethylated (<10%)	Q96RW7	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN019344	Chromosome_7A	37940	15	972	34.37269372693727	0.8887951835453417	0.7139928118291241	911	0	0.6698187549251379	141	0	0.7201561254500976	770	0	0.569216757741348	57	0	unmethylated (<10%)	O75051	Plexin-A2 (Semaphorin receptor OCT)	animal organ development [GO:0048513]; limb bud formation [GO:0060174]; neural tube development [GO:0021915]; pharyngeal system development [GO:0060037]; regulation of cell migration [GO:0030334]; semaphorin-plexin signaling pathway [GO:0071526]; somitogenesis [GO:0001756]; synapse assembly [GO:0007416]	hit with GO BP
GN013179	Chromosome_7A	290	1	16	44.48275862068966	1.2275132275132274	0.7184846505551927	16	0	0.7184846505551927	16	0	NA	NA	NA	0.5738447598912715	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019345	Chromosome_7A	14326	4	249	30.559821303922938	0.7494004773492307	1.5180948269659689	246	0	0.2766251728907331	31	0	1.7476555839727195	215	0	0.6295907660020986	52	0	unmethylated (<10%)	O44252	Protein rolling stone	myoblast fusion [GO:0007520]	hit with GO BP
GN019346	Chromosome_7A	3205	2	71	39.15756630265211	0.5786522568340751	85.52162849872774	71	0.971830985915493	87.86764705882354	45	1	82.61117445838084	26	0.9230769230769231	85.00451671183379	21	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019347	Chromosome_7A	20129	16	302	36.57906503055293	0.4546481758677154	90.4196672460889	299	0.9933110367892977	91.26525369299935	33	1	90.34879965550651	266	0.9924812030075187	28.6468330134357	29	0.27586206896551724	methylated (>=50%)	P09960	Leukotriene A-4 hydrolase (LTA-4 hydrolase) (EC 3.3.2.6) (Leukotriene A(4) hydrolase) (Tripeptide aminopeptidase LTA4H) (EC 3.4.11.4)	leukotriene biosynthetic process [GO:0019370]; peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]; response to peptide hormone [GO:0043434]; response to zinc ion [GO:0010043]; type I pneumocyte differentiation [GO:0060509]	hit with GO BP
GN019348	Chromosome_7A	4213	6	171	40.042724899121765	1.0132731164889324	0.5584252408208851	171	0	0.6331785563528916	80	0	0.5214851898206091	91	0	0.9505703422053232	64	0	unmethylated (<10%)	Q9CPW0	Contactin-associated protein-like 2 (Cell recognition molecule Caspr2)	action potential initiation [GO:0099610]; adult behavior [GO:0030534]; associative learning [GO:0008306]; axonogenesis [GO:0007409]; behavioral response to pain [GO:0048266]; cell adhesion [GO:0007155]; cell morphogenesis [GO:0000902]; cell population proliferation [GO:0008283]; central nervous system myelination [GO:0022010]; cerebellar Purkinje cell layer morphogenesis [GO:0021692]; cerebellum development [GO:0021549]; chemical synaptic transmission [GO:0007268]; circadian sleep/wake cycle [GO:0042745]; clustering of voltage-gated potassium channels [GO:0045163]; dendrite arborization [GO:0140059]; dendritic spine development [GO:0060996]; dendritic spine maintenance [GO:0097062]; dendritic spine organization [GO:0097061]; embryonic brain development [GO:1990403]; ERK1 and ERK2 cascade [GO:0070371]; excitatory chemical synaptic transmission [GO:0098976]; excitatory postsynaptic potential [GO:0060079]; excitatory synapse assembly [GO:1904861]; fat cell differentiation [GO:0045444]; gene expression [GO:0010467]; glial cell proliferation [GO:0014009]; glutamatergic neuron differentiation [GO:1905962]; grooming behavior [GO:0007625]; in utero embryonic development [GO:0001701]; inflammatory response [GO:0006954]; inhibitory chemical synaptic transmission [GO:0098977]; inhibitory synapse assembly [GO:1904862]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; learning [GO:0007612]; limbic system development [GO:0021761]; locomotor rhythm [GO:0045475]; locomotory behavior [GO:0007626]; maintenance of synapse structure [GO:0099558]; mitochondrion organization [GO:0007005]; motor behavior [GO:0061744]; multicellular organism growth [GO:0035264]; myelination [GO:0042552]; negative regulation of neuronal action potential [GO:1904456]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of synaptic transmission, GABAergic [GO:0032229]; nervous system development [GO:0007399]; neural precursor cell proliferation [GO:0061351]; neuromuscular junction development, skeletal muscle fiber [GO:0098529]; neuromuscular process [GO:0050905]; neuromuscular process controlling posture [GO:0050884]; neuron projection development [GO:0031175]; neuron projection morphogenesis [GO:0048812]; neuron recognition [GO:0008038]; neuronal action potential [GO:0019228]; positive regulation of gap junction assembly [GO:1903598]; positive regulation of neuronal action potential [GO:1904457]; postsynaptic density organization [GO:0097106]; prepulse inhibition [GO:0060134]; protein localization to juxtaparanode region of axon [GO:0071205]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; response to dietary excess [GO:0002021]; response to heat [GO:0009408]; response to hormone [GO:0009725]; response to interleukin-17 [GO:0097396]; response to light intensity [GO:0009642]; response to mechanical stimulus [GO:0009612]; response to metformin [GO:1901558]; response to odorant [GO:1990834]; response to pain [GO:0048265]; response to xenobiotic stimulus [GO:0009410]; rhythmic behavior [GO:0007622]; signal transduction [GO:0007165]; social behavior [GO:0035176]; startle response [GO:0001964]; TOR signaling [GO:0031929]; transmission of nerve impulse [GO:0019226]; vocal learning [GO:0042297]; vocalization behavior [GO:0071625]; walking behavior [GO:0090659]	hit with GO BP
GN019349	Chromosome_7A	1496	4	54	41.1764705882353	0.8524756236545523	7.265521796565389	54	0	9.625126646403242	41	0	2.846299810246679	13	0	0.5535055350553506	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019350	Chromosome_7A	2796	5	84	42.41773962804006	0.670946067550543	90.86821169145624	84	0.9404761904761905	91.129883843717	83	0.9397590361445783	76	1	1	32.563891178895304	22	0.09090909090909091	methylated (>=50%)	Q7Z3G6	Prickle-like protein 2	blastocyst formation [GO:0001825]; protein localization to axon [GO:0099612]; Wnt signaling pathway, planar cell polarity pathway [GO:0060071]	hit with GO BP
GN019351	Chromosome_7A	1463	2	36	39.43950786056049	0.6399358460304732	0.4897959183673469	36	0	0.5454545454545454	34	0	0	2	0	0.6134969325153374	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020345	Chromosome_7A	362	1	30	52.209944751381215	1.3908811475409837	0.4275165176836378	30	0	0.4275165176836378	30	0	NA	NA	NA	0.5920783993466721	120	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019324	Chromosome_7A	1282	2	37	37.129485179407176	0.8374646892655367	0.8086253369272237	37	0	0.4601226993865031	14	0	0.9975062344139651	23	0	1.0502864417568427	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019325	Chromosome_7A	10810	6	223	36.808510638297875	0.6113533906282969	67.12184020157684	223	0.6816143497757847	42.719298245614034	61	0.39344262295081966	72.6728524393894	162	0.7901234567901234	11.415672363753627	54	0.07407407407407407	methylated (>=50%)	Q08BL7	Glycerate kinase (EC 2.7.1.31)	protein phosphorylation [GO:0006468]	hit with GO BP
GN019323	Chromosome_7A	5394	5	81	36.83722654801632	0.4428032836728489	79.27528675703859	81	0.9382716049382716	79.96485061511423	41	0.9512195121951219	78.7224048849225	40	0.925	18.006644518272424	26	0.19230769230769232	methylated (>=50%)	Q95LL8	EF-hand calcium-binding domain-containing protein 12	NA	hit, no GO BP
GN019322	Chromosome_7A	35164	32	943	36.77056080081902	0.7946009700176366	32.001172357485295	917	0.3075245365321701	24.498678688014923	136	0.27205882352941174	33.16881985774423	781	0.31370038412291934	0.608457560085184	57	0	sparse (10-50%)	Q9MYW6	Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (XD) (EC 1.17.1.4); Xanthine oxidase (XO) (EC 1.17.3.2) (Xanthine oxidoreductase) (XOR)]	AMP catabolic process [GO:0006196]; deoxyinosine catabolic process [GO:0006149]; hypoxanthine catabolic process [GO:0009114]; IMP catabolic process [GO:0006204]; inosine catabolic process [GO:0006148]; xanthine catabolic process [GO:0009115]	hit with GO BP
GN019321	Chromosome_7A	2830	5	27	34.87632508833922	0.31511097547899675	72.93768545994065	27	0.9259259259259259	76.85950413223141	9	0.8888888888888888	71.86081694402421	18	0.9444444444444444	77.737881508079	24	0.9166666666666666	methylated (>=50%)	Q6GLL2	Monoacylglycerol lipase abhd6-A (EC 3.1.1.23) (Abhydrolase domain-containing protein 6-A)	acylglycerol catabolic process [GO:0046464]; lysobisphosphatidic acid metabolic process [GO:2001311]; monoacylglycerol catabolic process [GO:0052651]	hit with GO BP
GN019320	Chromosome_7A	9337	12	226	36.017992931348395	0.7498527061208158	87.39324698829252	226	0.9911504424778761	94.66981132075472	36	1	86.40190219137588	190	0.9894736842105263	93.53304802662862	54	1	methylated (>=50%)	Q96I25	Splicing factor 45 (45 kDa-splicing factor) (RNA-binding motif protein 17)	alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA cis splicing, via spliceosome [GO:0045292]	hit with GO BP
GN019312	Chromosome_7A	11574	7	172	34.76758251252808	0.4918724939736769	78.91501609913162	172	0.813953488372093	69.60600375234522	48	0.6666666666666666	81.36010841443883	124	0.8709677419354839	73.24942791762014	61	0.7049180327868853	methylated (>=50%)	Q5ZIH2	Vacuolar fusion protein MON1 homolog A	protein secretion [GO:0009306]; protein targeting to vacuole [GO:0006623]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN019313	Chromosome_7A	465	3	9	35.69892473118279	0.6147179788484136	93.1637519872814	9	1	92.83582089552239	5	1	93.5374149659864	4	1	94.31870669745959	36	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019314	Chromosome_7A	5372	7	105	38.58897989575577	0.5272032227009749	87.49271703243348	105	0.9619047619047619	93.75614552605703	50	1	83.40288924558587	55	0.9272727272727272	82.71421495789996	31	0.967741935483871	methylated (>=50%)	Q6ZVT6	Protein CFAP20DC (Uncharacterized protein C3orf67)	NA	hit, no GO BP
GN019315	Chromosome_7A	1635	3	34	35.41284403669725	0.6647295164299039	18.38006230529595	34	0.029411764705882353	19.003115264797508	6	0	18.25545171339564	28	0.03571428571428571	0.7444828503057698	81	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019316	Chromosome_7A	3826	2	167	41.348667015159435	1.0302109786280342	0.9874723655121592	162	0	0.7484168105929764	41	0	1.06973058637084	121	0	0.5011565150346955	47	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN019311	Chromosome_7A	19691	14	239	34.84332943984561	0.40017184906533154	85.22074148929451	235	0.9702127659574468	71.05124141574221	32	0.84375	87.14490674318508	203	0.9901477832512315	28.96358543417367	35	0.2857142857142857	methylated (>=50%)	Q8BX57	PX domain-containing protein kinase-like protein (Modulator of Na,K-ATPase) (MONaKA)	inflammatory response [GO:0006954]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of ATP-dependent activity [GO:0032780]; negative regulation of monoatomic ion transport [GO:0043271]	hit with GO BP
GN019309	Chromosome_7A	13692	11	206	35.62664329535495	0.47751771887363087	90.9128121162505	203	0.9950738916256158	92.57460097154754	29	1	90.69055132726935	174	0.9942528735632183	93.95161290322581	12	1	methylated (>=50%)	Q6P2Y3	DnaJ homolog subfamily C member 2	'de novo' cotranslational protein folding [GO:0051083]; positive regulation of DNA-templated transcription [GO:0045893]; regulation of translational fidelity [GO:0006450]	hit with GO BP
GN019306	Chromosome_7A	1420	6	40	37.04225352112676	0.8219376311410173	0.7317073170731707	40	0	0.7671232876712328	36	0	0.4444444444444444	4	0	0.6615944426066821	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019305	Chromosome_7A	9050	4	223	34.3646408839779	0.8361337035028416	0.667589351135716	223	0	0.5042016806722689	23	0	0.6851167402866672	200	0	0.38035961272475793	45	0	unmethylated (<10%)	Q9I931	Fucolectin-1	regulation of cellular defense response [GO:0010185]; regulation of complement activation, lectin pathway [GO:0001868]; regulation of innate immune response [GO:0045088]	hit with GO BP
GN019304	Chromosome_7A	16531	4	451	34.72869154921057	0.9048227887521338	0.836056529304418	448	0	0.38095238095238093	11	0	0.8464276412883063	437	0	0.7575757575757576	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019355	Chromosome_7A	16982	12	283	38.293487221764224	0.4570156314575166	93.25809674954446	281	0.99644128113879	96.09036517433464	169	1	89.50676321901899	112	0.9910714285714286	92.5392251040666	43	0.9767441860465116	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019356	Chromosome_7A	251	2	5	37.84860557768924	0.5746336996336996	80.11049723756906	5	1	80.11049723756906	5	1	NA	NA	NA	16.725978647686834	67	0.1044776119402985	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN010874	Chromosome_7A	503	1	4	37.37574552683897	0.22863636363636364	14.054054054054054	4	0	14.054054054054054	4	0	NA	NA	NA	22.071197411003237	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019301	Chromosome_7A	16219	15	409	35.3967568900672	0.8082279121053176	0.7096834438322907	409	0	0.7518796992481203	56	0	0.7036997547712975	353	0	0.945179584120983	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019358	Chromosome_7A	7113	8	121	35.8920286798819	0.5286299535660762	90.76259645937358	121	0.9917355371900827	91.4759982054733	35	0.9714285714285714	90.52103903995139	86	1	67.76217508216313	63	0.7142857142857143	methylated (>=50%)	Q80Y56	Rabenosyn-5 (FYVE finger-containing Rab5 effector protein rabenosyn-5) (RAB effector RBSN) (Zinc finger FYVE domain-containing protein 20)	early endosome to Golgi transport [GO:0034498]; Golgi to lysosome transport [GO:0090160]; regulation of Golgi organization [GO:1903358]	hit with GO BP
GN019359	Chromosome_7A	4161	5	127	36.43354962749339	0.919761273209549	0.5455825413586766	127	0	0.5747126436781609	50	0	0.5307855626326964	77	0	1.1405672009864365	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016232	Chromosome_7A	517	2	17	41.58607350096712	0.774634232328574	4.761904761904762	17	0	4.232804232804233	16	0	8.333333333333334	1	0	0.6152389966871746	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019360	Chromosome_7A	13729	7	345	36.4775293175031	0.7569088937699904	0.8778391651319828	343	0	0.41946308724832215	53	0	0.9564216884797929	290	0	0.6870409855484483	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019298	Chromosome_7A	5994	4	146	30.547213880547215	1.1889302502513381	2.5008889415669078	146	0	0.5753739930955121	19	0	2.721987315010571	127	0	0.8943089430894309	37	0	unmethylated (<10%)	Q7PCJ9	Thialysine N-epsilon-acetyltransferase (EC 2.3.1.-) (Diamine acetyltransferase 2) (EC 2.3.1.57) (Spermidine/spermine N(1)-acetyltransferase 2) (SSAT-2)	polyamine metabolic process [GO:0006595]	hit with GO BP
GN019361	Chromosome_7A	12447	12	206	35.10886157306982	0.5391874091569767	89.89802421924793	203	0.916256157635468	93.41476367498673	39	0.9743589743589743	89.27734558065423	164	0.9024390243902439	1.3134851138353765	48	0	methylated (>=50%)	Q6NRT3	WD40 repeat-containing protein SMU1 (Smu-1 suppressor of mec-8 and unc-52 protein homolog)	mRNA splicing, via spliceosome [GO:0000398]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	hit with GO BP
GN019292	Chromosome_7A	12661	15	194	38.51986414975121	0.4171964352805854	96.37770550633621	194	1	97.1117304281733	104	1	95.79476861167002	90	1	82.77404921700224	13	0.8461538461538461	methylated (>=50%)	Q7Z6Z7	E3 ubiquitin-protein ligase HUWE1 (EC 2.3.2.26) (ARF-binding protein 1) (ARF-BP1) (HECT, UBA and WWE domain-containing protein 1) (HECT-type E3 ubiquitin transferase HUWE1) (Homologous to E6AP carboxyl terminus homologous protein 9) (HectH9) (Large structure of UREB1) (LASU1) (Mcl-1 ubiquitin ligase E3) (Mule) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)	base-excision repair [GO:0006284]; circadian regulation of gene expression [GO:0032922]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; negative regulation of mitochondrial fusion [GO:0010637]; negative regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035359]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein localization to mitochondrion [GO:1903749]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of type 2 mitophagy [GO:1905091]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein branched polyubiquitination [GO:0141198]; protein K48-linked ubiquitination [GO:0070936]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN019291	Chromosome_7A	27538	16	401	36.55312658871378	0.43894940613422795	93.49484073575594	391	0.9974424552429667	95.02541757443718	50	1	93.27907452907453	341	0.9970674486803519	89.42307692307692	18	1	methylated (>=50%)	Q91VU7	Pseudouridylate synthase 7 homolog (EC 5.4.99.-)	mRNA pseudouridine synthesis [GO:1990481]; negative regulation of translation [GO:0017148]; pseudouridine synthesis [GO:0001522]; regulation of hematopoietic stem cell differentiation [GO:1902036]; regulation of mesoderm development [GO:2000380]; tRNA pseudouridine synthesis [GO:0031119]	hit with GO BP
GN019290	Chromosome_7A	7374	5	257	36.54732845131543	1.0448986208197009	0.8751139471285324	256	0	0.738255033557047	92	0	0.9692307692307692	164	0	0.39930122285999503	66	0	unmethylated (<10%)	Q9LZF7	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 (OTU domain-containing protein 10) (EC 3.4.19.12) (Deubiquitinating enzyme OTU10)	NA	hit, no GO BP
GN019289	Chromosome_7A	5733	4	200	37.11843711843712	1.0128116343490305	0.9311645450259312	199	0	0.42446941323345816	83	0	1.3842375530252289	116	0	0.4755865567533291	63	0	unmethylated (<10%)	Q9LZF7	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 (OTU domain-containing protein 10) (EC 3.4.19.12) (Deubiquitinating enzyme OTU10)	NA	hit, no GO BP
GN019364	Chromosome_7A	5065	5	137	36.031589338598224	0.8353497633252916	0.5788712011577424	136	0	0.3952569169960474	94	0	0.921234454168586	42	0	1.4388489208633093	54	0	unmethylated (<10%)	Q9LZF7	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 (OTU domain-containing protein 10) (EC 3.4.19.12) (Deubiquitinating enzyme OTU10)	NA	hit, no GO BP
GN019365	Chromosome_7A	16590	29	252	36.51597347799879	0.45780592011031107	94.01171930827498	241	0.9875518672199171	97.19144550373615	87	1	92.79145654108574	154	0.9805194805194806	15.848214285714286	35	0.2	methylated (>=50%)	Q7TMY8	E3 ubiquitin-protein ligase HUWE1 (EC 2.3.2.26) (E3Histone) (HECT, UBA and WWE domain-containing protein 1) (HECT-type E3 ubiquitin transferase HUWE1) (Upstream regulatory element-binding protein 1) (URE-B1) (URE-binding protein 1)	base-excision repair [GO:0006284]; canonical NF-kappaB signal transduction [GO:0007249]; circadian regulation of gene expression [GO:0032922]; defense response to bacterium [GO:0042742]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of mitochondrial fusion [GO:0010637]; negative regulation of peroxisome proliferator activated receptor signaling pathway [GO:0035359]; peroxisome proliferator activated receptor signaling pathway [GO:0035357]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of type 2 mitophagy [GO:1905091]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein branched polyubiquitination [GO:0141198]; protein K48-linked ubiquitination [GO:0070936]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN019366	Chromosome_7A	9381	4	184	36.11555271293039	0.6034442494458856	92.54498714652956	184	1	97.31903485254692	75	1	90.39789542913515	109	1	36.80327868852459	43	0.37209302325581395	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019367	Chromosome_7A	11928	14	139	34.02917505030181	0.4025385788231638	88.94435004248088	138	0.9565217391304348	86.39883833494676	35	0.9142857142857143	89.65986394557824	103	0.970873786407767	59.49579831932773	30	0.5666666666666667	methylated (>=50%)	Q28I85	POC1 centriolar protein homolog A (Pat-interacting protein 2) (Pix2) (xPix2) (WD repeat-containing protein 51A)	cilium assembly [GO:0060271]; microtubule-based process [GO:0007017]; multicellular organismal-level homeostasis [GO:0048871]	hit with GO BP
GN019368	Chromosome_7A	7456	3	91	35.98444206008584	0.37973963755219003	79.66016991504247	91	0.8241758241758241	36.059479553903344	15	0.3333333333333333	86.43187066974596	76	0.9210526315789473	0.4214328717639976	49	0	methylated (>=50%)	Q6DQX6	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit)	NA	hit, no GO BP
GN019369	Chromosome_7A	2043	3	70	37.05335291238375	0.9982409850483729	0.6785411365564037	70	0	1.1111111111111112	36	0	0.38149737720553173	34	0	0.6263048016701461	58	0	unmethylated (<10%)	Q6ZSM3	Monocarboxylate transporter 12 (MCT 12) (Creatine transporter 2) (CRT2) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN017676	Chromosome_7A	594	1	3	38.72053872053872	0.13540004558924093	76.05633802816901	3	1	76.05633802816901	3	1	NA	NA	NA	64.24116424116424	10	0.9	NA	NA	NA	NA	no Swiss-Prot hit
GN019370	Chromosome_7A	3602	5	94	39.0893947806774	0.694774641673592	0.3415883859948762	93	0	0.2533478103510677	71	0	0.6666666666666666	22	0	0.5263157894736842	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019371	Chromosome_7A	2656	5	85	37.95180722891566	0.8911344438304255	0.7173601147776184	83	0	0.6487025948103793	47	0	0.7805325987144169	36	0	1.054481546572935	46	0	unmethylated (<10%)	A7RX26	Probable imidazolonepropionase (EC 3.5.2.7) (Amidohydrolase domain-containing protein 1 homolog)	L-histidine catabolic process [GO:0006548]	hit with GO BP
GN019288	Chromosome_7A	1523	2	55	44.320420223243595	0.7354645547614449	0.5113636363636364	55	0	0.4820936639118457	48	0	0.6493506493506493	7	0	0.7342657342657343	60	0	unmethylated (<10%)	Q6GMG6	Solute carrier family 52, riboflavin transporter, member 3-B (Riboflavin transporter 2-B) (RFT2-B)	riboflavin transport [GO:0032218]	hit with GO BP
GN019287	Chromosome_7A	10831	10	135	35.01061767149848	0.4067554590692209	93.16123800513583	132	1	93.62898188632104	35	1	93.03208002759573	97	1	95.13190954773869	39	1	methylated (>=50%)	Q5ZK36	Inhibitor of growth protein 3	chromatin remodeling [GO:0006338]	hit with GO BP
GN019372	Chromosome_7A	16714	10	256	35.55701806868493	0.4851724098830946	72.6435715705107	243	0.7983539094650206	65.79804560260587	37	0.6486486486486487	73.41837487096298	206	0.8252427184466019	37.19557195571956	33	0.42424242424242425	methylated (>=50%)	P48728	Aminomethyltransferase, mitochondrial (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT)	glycine catabolic process [GO:0006546]; glycine decarboxylation via glycine cleavage system [GO:0019464]	hit with GO BP
GN019373	Chromosome_7A	10563	7	222	37.13907033986557	0.6123650960779152	81.42377024136877	222	0.9099099099099099	85.62066306861989	39	1	80.63321472659938	183	0.8907103825136612	11.802902979373568	28	0.10714285714285714	methylated (>=50%)	Q5XTS1	Calcium-independent phospholipase A2-gamma (EC 3.1.1.-) (EC 3.1.1.5) (Group VIB calcium-independent phospholipase A2) (Intracellular membrane-associated calcium-independent phospholipase A2 gamma) (iPLA2-gamma) (Patatin-like phospholipase domain-containing protein 8)	arachidonate metabolic process [GO:0019369]; cardiolipin metabolic process [GO:0032048]; lipid homeostasis [GO:0055088]; triglyceride homeostasis [GO:0070328]	hit with GO BP
GN019374	Chromosome_7A	15668	11	243	36.947919326014805	0.4589958791536677	78.46054333764553	230	0.9434782608695652	80.71625344352617	19	1	78.28488683900032	211	0.9383886255924171	72.40915208613728	10	0.9	methylated (>=50%)	Q05B18	Protein SHQ1 homolog	box H/ACA snoRNP assembly [GO:0000493]; protein-RNA complex assembly [GO:0022618]	hit with GO BP
GN019375	Chromosome_7A	59628	14	1548	34.84604548198833	0.8557686452583423	0.7514761137949544	1454	0	0.4285539365740174	48	0	0.7690361413694836	1406	0	1.0585305105853051	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019376	Chromosome_7A	10329	16	269	35.50198470326266	0.8275352770849801	0.5557882977237816	248	0	0.5383097075183922	70	0	0.5636887140597754	178	0	0.5921450151057401	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019284	Chromosome_7A	772	3	23	37.56476683937824	0.868306518656169	0.4708097928436911	23	0	0.4013761467889908	19	0	0.7894736842105263	4	0	0.5143591941705958	53	0	unmethylated (<10%)	Q0P4P2	Fibrinogen C domain-containing protein 1	NA	hit, no GO BP
GN019377	Chromosome_7A	1894	5	13	32.62935586061246	0.26000823679736423	1.7605633802816902	8	0	2.4630541871921183	6	0	0	2	0	0.7450771687067589	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016127	Chromosome_7A	208	1	8	47.11538461538461	0.7074829931972789	4.641350210970464	8	0	4.641350210970464	8	0	NA	NA	NA	4.24890350877193	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016123	Chromosome_7A	302	1	25	49.00662251655629	1.62891046386192	9.640287769784173	25	0	9.640287769784173	25	0	NA	NA	NA	0.943783340172343	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016126	Chromosome_7A	302	1	26	49.66887417218543	1.641304347826087	7.623007623007623	26	0	7.623007623007623	26	0	NA	NA	NA	0.45146726862302483	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019340	Chromosome_7A	324	2	4	36.41975308641975	0.37327188940092165	1.675977653631285	4	0	1.675977653631285	4	0	NA	NA	NA	1.1363636363636365	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001278	Chromosome_7A	732	1	18	40.43715846994535	0.6025242363270532	0.9157509157509157	11	0	0.9157509157509157	11	0	NA	NA	NA	2.035886818495514	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019378	Chromosome_7A	961	2	36	39.85431841831426	0.9565890615495216	0.4020100502512563	36	0	0.7009345794392523	19	0	0.1763668430335097	17	0	0.5656108597285068	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018487	Chromosome_7A	1350	1	20	38.22222222222222	0.41777557714922325	18.30065359477124	12	0.08333333333333333	18.30065359477124	12	0.08333333333333333	NA	NA	NA	0.7218844984802432	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019379	Chromosome_7A	1257	2	45	39.69769291964996	0.9358248957712925	0.3072721065209969	45	0	0.3072721065209969	45	0	NA	NA	NA	0.3644093531733981	73	0	unmethylated (<10%)	Q8K3K9	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN019380	Chromosome_7A	268	2	4	35.82089552238806	0.48223121907332434	67.85714285714286	3	1	67.85714285714286	3	1	NA	NA	NA	87.99448022079117	54	0.9444444444444444	NA	NA	NA	NA	no Swiss-Prot hit
GN002294	Chromosome_7A	409	1	8	37.65281173594132	0.5767671426053235	79.45007235890014	8	1	79.45007235890014	8	1	NA	NA	NA	87.13789107763616	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019280	Chromosome_7A	3773	3	56	37.26477604028624	0.4279094635537337	90.80376538740043	55	0.9818181818181818	86.52037617554859	20	0.95	93.07479224376732	35	1	26.118210862619808	58	0.29310344827586204	methylated (>=50%)	G3H0N9	DnaJ homolog subfamily B member 9 (Endoplasmic reticulum DNA J domain-containing protein 4) (ER-resident protein ERdj4) (ERdj4)	B cell differentiation [GO:0030183]; ERAD pathway [GO:0036503]; negative regulation of IRE1-mediated unfolded protein response [GO:1903895]; positive regulation of immunoglobulin production [GO:0002639]; response to endoplasmic reticulum stress [GO:0034976]	hit with GO BP
GN019279	Chromosome_7A	3213	2	71	36.539060068471834	0.6648393442622951	91.40304274329873	71	0.9859154929577465	89.94739918176505	42	1	92.42798353909465	29	0.9655172413793104	85.14780100937274	42	1	methylated (>=50%)	Q96KE9	BTB/POZ domain-containing protein 6 (Lens BTB domain protein)	neurogenesis [GO:0022008]	hit with GO BP
GN019381	Chromosome_7A	22239	6	523	35.94136426997617	0.72821615108833	1.0151811492968241	356	0	0.3875968992248062	83	0	1.2136815005516735	273	0	1.1036174126302882	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019274	Chromosome_7A	13591	7	430	36.75226252667206	0.9370314145460469	2.1143346536773366	429	0	1.7946161515453638	66	0	2.1757161998341097	363	0	0.508130081300813	62	0	unmethylated (<10%)	Q8BLA8	Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Wasabi receptor)	calcium ion transmembrane import into cytosol [GO:0097553]; calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; cell surface receptor signaling pathway [GO:0007166]; cellular response to caffeine [GO:0071313]; cellular response to carbon dioxide [GO:0071244]; cellular response to cold [GO:0070417]; cellular response to food [GO:0071240]; cellular response to heat [GO:0034605]; cellular response to hydrogen peroxide [GO:0070301]; cellular response to toxic substance [GO:0097237]; detection of chemical stimulus involved in sensory perception of pain [GO:0050968]; detection of mechanical stimulus involved in sensory perception [GO:0050974]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; intracellular calcium ion homeostasis [GO:0006874]; positive regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0035774]; positive regulation of monoatomic anion transport [GO:1903793]; protein homotetramerization [GO:0051289]; regulation of blood circulation [GO:1903522]; regulation of neuronal action potential [GO:0098908]; response to cold [GO:0009409]; response to hydrogen peroxide [GO:0042542]; response to pain [GO:0048265]; response to xenobiotic stimulus [GO:0009410]; sensory perception of pain [GO:0019233]; thermoception [GO:0050955]; ureteric peristalsis [GO:0072105]; urinary bladder smooth muscle contraction [GO:0014832]; vasodilation [GO:0042311]	hit with GO BP
GN013370	Chromosome_7A	318	1	5	40.56603773584906	0.38498789346246975	NA	0	NA	NA	NA	NA	NA	NA	NA	0	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019275	Chromosome_7A	1149	3	40	39.860748476936465	0.8824884792626728	0.7738607050730868	40	0	0.8583690987124464	36	0	0.4329004329004329	4	0	0.6134969325153374	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019276	Chromosome_7A	1398	3	30	35.336194563662374	0.6874395580979855	0.2058672156459084	30	0	0.1638001638001638	21	0	0.2770083102493075	9	0	0.591556870126378	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019277	Chromosome_7A	972	2	36	38.16872427983539	1.0170910359260552	0.7383966244725738	36	0	0.6825938566552902	28	0	0.8287292817679558	8	0	0.5681818181818182	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019383	Chromosome_7A	1904	4	43	32.30042016806723	0.8658572697660646	0.83166999334664	43	0	0.487012987012987	8	0	0.9205020920502092	35	0	2.962962962962963	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019270	Chromosome_7A	2829	2	77	37.539766702014845	0.7732663601994995	1.3659396342806787	77	0	1.606425702811245	27	0	1.2160228898426324	50	0	0.8562415502478594	41	0	unmethylated (<10%)	Q63HM9	PI-PLC X domain-containing protein 3	lipid metabolic process [GO:0006629]	hit with GO BP
GN019384	Chromosome_7A	13600	7	208	35.1985294117647	0.49423560683809065	85.47439821325172	200	0.87	72.35602094240838	24	0.5	86.599604814083	176	0.9204545454545454	0.5401234567901234	42	0	methylated (>=50%)	Q66HY7	Eukaryotic translation initiation factor 4E type 3 (eIF-4E type 3) (eIF-4E3) (eIF4E type 3) (eIF4E-3)	translational initiation [GO:0006413]	hit with GO BP
GN019269	Chromosome_7A	7286	2	130	38.4161405435081	0.4846298684022022	83.74509803921569	126	0.9444444444444444	90.42461005199307	57	0.9824561403508771	78.22349570200574	69	0.9130434782608695	84.21052631578948	25	1	methylated (>=50%)	Q96M94	Kelch-like protein 15	negative regulation of double-strand break repair via homologous recombination [GO:2000042]; nuclear protein quality control by the ubiquitin-proteasome system [GO:0071630]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN019268	Chromosome_7A	7316	4	116	38.88737014762165	0.4309101525806697	69.88286066584463	113	0.7787610619469026	69.73365617433414	11	0.7272727272727273	69.90462734016249	102	0.7843137254901961	24.61841457410143	24	0.2916666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019267	Chromosome_7A	14468	10	230	35.41609068288637	0.5069802646333259	70.92974992217495	227	0.8986784140969163	90.75704225352112	22	1	69.68794795457052	205	0.8878048780487805	26.80965147453083	22	0.3181818181818182	methylated (>=50%)	E7EXX2	Solute carrier family 41 member 1	chordate embryonic development [GO:0043009]; magnesium ion homeostasis [GO:0010960]; pronephros development [GO:0048793]	hit with GO BP
GN003585	Chromosome_7A	461	1	5	39.47939262472885	0.3010710553814002	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4132231404958678	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003604	Chromosome_7A	461	1	5	39.47939262472885	0.3010710553814002	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9174311926605505	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002981	Chromosome_7A	282	1	14	43.262411347517734	1.0610051061542596	5.427631578947368	14	0	5.427631578947368	14	0	NA	NA	NA	2.177700348432056	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001911	Chromosome_7A	631	1	1	52.13946117274168	0.023413729128014843	0	1	0	0	1	0	NA	NA	NA	1.8429487179487178	39	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019386	Chromosome_7A	4261	6	110	34.52241257920676	0.8664411416740609	0.5975723622782446	110	0	0.4854368932038835	35	0	0.638895987733197	75	0	0.5899705014749262	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019264	Chromosome_7A	7473	8	172	36.277264820018736	0.7011466163362826	1.5342291820971325	171	0	0.7139457401237506	38	0	1.7687074829931972	133	0	0.5420054200542005	39	0	unmethylated (<10%)	P42574	Caspase-3 (CASP-3) (EC 3.4.22.56) (Apopain) (Cysteine protease CPP32) (CPP-32) (Protein Yama) (SREBP cleavage activity 1) (SCA-1) [Cleaved into: Caspase-3 subunit p17; Caspase-3 subunit p12]	apoptotic process [GO:0006915]; apoptotic signaling pathway [GO:0097190]; axonal fasciculation [GO:0007413]; cellular response to staurosporine [GO:0072734]; erythrocyte differentiation [GO:0030218]; execution phase of apoptosis [GO:0097194]; glial cell apoptotic process [GO:0034349]; hippocampus development [GO:0021766]; intrinsic apoptotic signaling pathway [GO:0097193]; intrinsic apoptotic signaling pathway in response to osmotic stress [GO:0008627]; keratinocyte differentiation [GO:0030216]; learning or memory [GO:0007611]; leukocyte apoptotic process [GO:0071887]; luteolysis [GO:0001554]; negative regulation of cytokine production [GO:0001818]; neuron differentiation [GO:0030182]; neurotrophin TRK receptor signaling pathway [GO:0048011]; platelet formation [GO:0030220]; positive regulation of amyloid-beta formation [GO:1902004]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of pyroptotic inflammatory response [GO:0140639]; protein catabolic process [GO:0030163]; protein maturation [GO:0051604]; protein processing [GO:0016485]; proteolysis [GO:0006508]; pyroptotic inflammatory response [GO:0070269]; regulation of macroautophagy [GO:0016241]; regulation of protein localization [GO:0032880]; regulation of protein stability [GO:0031647]; regulation of synaptic vesicle cycle [GO:0098693]; response to amino acid [GO:0043200]; response to anesthetic [GO:0072347]; response to cobalt ion [GO:0032025]; response to estradiol [GO:0032355]; response to ethanol [GO:0045471]; response to glucocorticoid [GO:0051384]; response to glucose [GO:0009749]; response to hydrogen peroxide [GO:0042542]; response to hypoxia [GO:0001666]; response to insulin-like growth factor stimulus [GO:1990418]; response to lipopolysaccharide [GO:0032496]; response to nicotine [GO:0035094]; response to tumor necrosis factor [GO:0034612]; response to X-ray [GO:0010165]; response to xenobiotic stimulus [GO:0009410]; striated muscle cell differentiation [GO:0051146]; swimming behavior [GO:0036269]; synapse pruning [GO:0098883]	hit with GO BP
GN019263	Chromosome_7A	5292	4	39	29.459561602418745	0.3504112138108077	90.78706528370958	38	1	87.27272727272727	2	1	90.97333761644715	36	1	88.21339950372209	18	1	methylated (>=50%)	A7T0W1	Protein UXT homolog	negative regulation of transcription by RNA polymerase II [GO:0000122]	hit with GO BP
GN019387	Chromosome_7A	12304	11	250	35.90702210663199	0.6383501512449903	90.42357274401473	246	0.983739837398374	94.23604757548033	66	1	89.5012542422901	180	0.9777777777777777	75.70671378091873	25	0.92	methylated (>=50%)	Q9D4D4	Transketolase-like protein 2 (EC 2.2.1.1)	pentose-phosphate shunt, non-oxidative branch [GO:0009052]	hit with GO BP
GN019255	Chromosome_7A	15259	5	182	36.14915787404155	0.36577852887946016	36.957437842393595	182	0.2967032967032967	72.50293772032903	27	0.8518518518518519	33.45677583613008	155	0.2	27.087198515769945	20	0.2	sparse (10-50%)	Q14135	Transcription cofactor vestigial-like protein 4 (Vgl-4)	negative regulation of cardiac muscle cell proliferation [GO:0060044]; negative regulation of cell growth [GO:0030308]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of hippo signaling [GO:0035331]; negative regulation of Wnt signaling pathway [GO:0030178]; positive regulation of protein catabolic process [GO:0045732]	hit with GO BP
GN019388	Chromosome_7A	6207	3	98	35.08941517641372	0.5130478934441716	83.65937859608745	98	0.9489795918367347	79.12589693411611	31	0.8709677419354839	84.94187119394722	67	0.9850746268656716	48.94627485900861	44	0.4772727272727273	methylated (>=50%)	Q53HV7	Single-strand selective monofunctional uracil DNA glycosylase (EC 3.2.2.-)	base-excision repair [GO:0006284]; depyrimidination [GO:0045008]	hit with GO BP
GN019257	Chromosome_7A	31416	8	542	33.46702317290553	0.6197205427898312	82.5045187004681	364	0.9258241758241759	91.42335766423358	18	1	82.02724476343928	346	0.9219653179190751	31.60696999031946	55	0.509090909090909	methylated (>=50%)	F1QCP6	Tafazzin (Taz) (EC 2.3.1.-)	cardiolipin acyl-chain remodeling [GO:0035965]; heart development [GO:0007507]; heart looping [GO:0001947]; inner mitochondrial membrane organization [GO:0007007]; positive regulation of heart contraction [GO:0045823]	hit with GO BP
GN020215	Chromosome_7A	264	1	7	50.75757575757576	0.4117647058823529	50.15873015873016	7	0.7142857142857143	50.15873015873016	7	0.7142857142857143	NA	NA	NA	39.38621759361843	47	0.1276595744680851	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019258	Chromosome_7A	628	2	15	41.87898089171974	0.5505552308591467	80.82191780821918	15	1	80.82191780821918	15	1	NA	NA	NA	84.2057761732852	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019259	Chromosome_7A	8905	7	129	35.957327344188656	0.4512355167007951	89.32051448616345	126	0.9841269841269841	89.25410872313527	15	1	89.32812047494932	111	0.9819819819819819	83.13197026022304	33	1	methylated (>=50%)	Q96MG7	Non-structural maintenance of chromosomes element 3 homolog (Non-SMC element 3 homolog) (Hepatocellular carcinoma-associated protein 4) (MAGE-G1 antigen) (Melanoma-associated antigen G1) (Necdin-like protein 2)	cellular response to hydroxyurea [GO:0072711]; cellular response to radiation [GO:0071478]; cellular response to UV [GO:0034644]; chromatin looping [GO:0140588]; DNA repair [GO:0006281]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of protein ubiquitination [GO:0031398]; protein sumoylation [GO:0016925]; regulation of telomere maintenance [GO:0032204]	hit with GO BP
GN019260	Chromosome_7A	1730	2	26	36.994219653179194	0.44153880888574765	64.58333333333333	26	0.6153846153846154	66.0668380462725	20	0.6	58.24175824175824	6	0.6666666666666666	0.4817444219066937	63	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019390	Chromosome_7A	1516	3	24	36.74142480211082	0.4730601206573747	91.76829268292683	23	1	87.82771535580524	8	1	94.47300771208226	15	1	87.96641791044776	16	1	methylated (>=50%)	Q5RCE1	Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)	negative regulation of cilium assembly [GO:1902018]; negative regulation of protein localization to cilium [GO:1903565]; protein transport [GO:0015031]; small GTPase-mediated signal transduction [GO:0007264]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN019391	Chromosome_7A	24904	32	371	35.146964343077414	0.4838900989275568	85.80721187838793	336	0.9583333333333334	90.25030631892176	97	0.9587628865979382	84.16978454392982	239	0.9581589958158996	24.31950022311468	37	0.24324324324324326	methylated (>=50%)	Q5XPI4	E3 ubiquitin-protein ligase RNF123 (EC 2.3.2.27) (Kip1 ubiquitination-promoting complex protein 1) (RING finger protein 123)	modification-dependent protein catabolic process [GO:0019941]; protein maturation [GO:0051604]; protein polyubiquitination [GO:0000209]; regulation of cell cycle [GO:0051726]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020305	Chromosome_7A	2374	5	32	37.194608256107834	0.39021583916335356	26.63575476558475	27	0	18.600777345918935	16	0	33.589620374819795	11	0	0.4396984924623116	34	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019254	Chromosome_7A	1806	4	32	33.11184939091916	0.6476600322754169	21.731618352850834	25	0.04	20.415800415800415	14	0	22.860199714693294	11	0.09090909090909091	1.17937987445311	94	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019393	Chromosome_7A	2135	3	36	34.988290398126466	0.5509677419354839	14.659685863874346	35	0.17142857142857143	7.255705090696313	20	0.1	21.978021978021978	15	0.26666666666666666	0.7956715467854869	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019872	Chromosome_7A	321	1	15	45.794392523364486	0.9064382530120482	1.4018691588785046	15	0	1.4018691588785046	15	0	NA	NA	NA	0.8364312267657993	58	0	unmethylated (<10%)	Q2TBI2	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]	hit with GO BP
GN019881	Chromosome_7A	2623	6	30	36.218070911170415	0.349895062606716	7.9621380846325165	30	0	8.994708994708995	25	0	2.464788732394366	5	0	2.0415738678544915	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001382	Chromosome_7A	2534	2	26	38.98973954222573	0.27652144715856625	64.67576791808874	14	0.7857142857142857	69	10	0.7	60.13986013986014	4	1	96.3963963963964	46	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019394	Chromosome_7A	1299	5	13	34.795996920708234	0.33208786454543665	0.7518796992481203	13	0	0.9398496240601504	10	0	0	3	0	1.2019230769230769	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019395	Chromosome_7A	2988	9	37	33.86880856760375	0.43182563862198264	1.027027027027027	35	0	1.646090534979424	15	0	0.6244424620874219	20	0	0.7497656982193065	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019396	Chromosome_7A	3677	5	61	33.01604568942072	0.6087748344370861	0.6571428571428571	61	0	0.35587188612099646	12	0	0.7147719537100068	49	0	1.2684989429175475	34	0	unmethylated (<10%)	P33316	Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial (dUTPase) (EC 3.6.1.23) (dUTP pyrophosphatase)	DNA replication [GO:0006260]; dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]; dUTP catabolic process [GO:0046081]; liver development [GO:0001889]; nucleobase-containing compound metabolic process [GO:0006139]; regulation of protein-containing complex assembly [GO:0043254]	hit with GO BP
GN019397	Chromosome_7A	5308	2	81	40.391861341371516	0.37425086371007543	55.78578259483583	81	0.6666666666666666	78.08792742498255	53	0.9245283018867925	37.03051643192488	28	0.17857142857142858	43.14477468839885	25	0.4	methylated (>=50%)	Q62165	Dystroglycan 1 (Dystroglycan) (Dystrophin-associated glycoprotein 1) [Cleaved into: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)]	angiogenesis involved in wound healing [GO:0060055]; axon guidance [GO:0007411]; axon regeneration [GO:0031103]; basement membrane organization [GO:0071711]; branching involved in salivary gland morphogenesis [GO:0060445]; calcium-dependent cell-matrix adhesion [GO:0016340]; cell surface receptor signaling pathway [GO:0007166]; cellular response to cholesterol [GO:0071397]; cellular response to mechanical stimulus [GO:0071260]; commissural neuron axon guidance [GO:0071679]; epithelial tube branching involved in lung morphogenesis [GO:0060441]; extracellular matrix assembly [GO:0085029]; heart development [GO:0007507]; heart morphogenesis [GO:0003007]; inhibitory synapse assembly [GO:1904862]; membrane protein ectodomain proteolysis [GO:0006509]; microtubule anchoring [GO:0034453]; morphogenesis of an epithelial sheet [GO:0002011]; morphogenesis of an epithelium [GO:0002009]; muscle attachment [GO:0016203]; myelination in peripheral nervous system [GO:0022011]; negative regulation of cell migration [GO:0030336]; negative regulation of MAPK cascade [GO:0043409]; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051898]; negative regulation of synaptic transmission, cholinergic [GO:0032223]; nerve development [GO:0021675]; nerve maturation [GO:0021682]; positive regulation of cell-matrix adhesion [GO:0001954]; positive regulation of myelination [GO:0031643]; positive regulation of oligodendrocyte differentiation [GO:0048714]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of protein kinase activity [GO:0045860]; positive regulation of Rac protein signal transduction [GO:0035022]; positive regulation of skeletal muscle acetylcholine-gated channel clustering [GO:1904395]; protein localization to synapse [GO:0035418]; protein transport [GO:0015031]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of synapse organization [GO:0050807]; regulation of synaptic plasticity [GO:0048167]; response to denervation involved in regulation of muscle adaptation [GO:0014894]; response to muscle activity [GO:0014850]; response to peptide hormone [GO:0043434]; retrograde trans-synaptic signaling by trans-synaptic protein complex [GO:0098942]; Schwann cell development [GO:0014044]; skeletal muscle tissue regeneration [GO:0043403]; synapse assembly [GO:0007416]; synaptic assembly at neuromuscular junction [GO:0051124]	hit with GO BP
GN019398	Chromosome_7A	20107	10	191	34.84358681056349	0.31299780038114555	54.25500149298298	186	0.6075268817204301	83.77645143787304	42	0.9285714285714286	47.62311067771819	144	0.5138888888888888	25.806451612903224	16	0.1875	methylated (>=50%)	Q3TA59	JmjC domain-containing protein 8 (Jumonji domain-containing protein 8)	cellular respiration [GO:0045333]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of sprouting angiogenesis [GO:1903672]; regulation of glycolytic process [GO:0006110]; regulation of pyruvate kinase activity [GO:1903302]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN019249	Chromosome_7A	2427	2	64	37.04161516275237	0.7725531936058252	0.726480203414457	64	0	0.6320224719101124	38	0	0.8276899924755455	26	0	2.272727272727273	42	0	unmethylated (<10%)	P35408	Prostaglandin E2 receptor EP4 subtype (PGE receptor EP4 subtype) (PGE2 receptor EP4 subtype) (Prostanoid EP4 receptor)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway [GO:0007193]; adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; bone development [GO:0060348]; cellular response to mechanical stimulus [GO:0071260]; cellular response to prostaglandin E stimulus [GO:0071380]; ERK1 and ERK2 cascade [GO:0070371]; immune response [GO:0006955]; inflammatory response [GO:0006954]; JNK cascade [GO:0007254]; negative regulation of cytokine production [GO:0001818]; negative regulation of eosinophil extravasation [GO:2000420]; negative regulation of inflammatory response [GO:0050728]; negative regulation of integrin activation [GO:0033624]; positive regulation of cytokine production [GO:0001819]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of inflammatory response [GO:0050729]; regulation of stress fiber assembly [GO:0051492]; response to mechanical stimulus [GO:0009612]; response to prostaglandin E [GO:0034695]; T-helper cell differentiation [GO:0042093]	hit with GO BP
GN019250	Chromosome_7A	1798	2	41	36.31813125695217	0.6935162188605404	0.4340277777777778	41	0	0.6451612903225806	17	0	0.3270111183780249	24	0	0.3523382447149263	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019251	Chromosome_7A	16672	4	508	38.3637236084453	0.8281339896314288	0.6076186024772143	461	0	0.6825938566552902	14	0	0.6049606775559588	447	0	0.42608980662078005	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019401	Chromosome_7A	8593	4	156	29.442569533341093	0.8415893984853364	0.7594417077175698	156	0	0.10989010989010989	20	0	0.8263527280959928	136	0	0.37862852334875896	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019245	Chromosome_7A	5173	4	126	35.337328436110575	0.781067854129918	1.9757920968316127	126	0	2.2972972972972974	21	0	1.927019270192702	105	0	0.46423296054019836	54	0	unmethylated (<10%)	Q7A551	Putative universal stress protein SA1532	NA	hit, no GO BP
GN019982	Chromosome_7A	4321	5	42	33.69590372598935	0.3435727537768354	0.729483282674772	36	0	1.4311270125223614	16	0	0.3683241252302026	20	0	0.5764563106796117	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012253	Chromosome_7A	2367	4	26	34.98098859315589	0.36757512229210343	5.882352941176471	26	0	8.017817371937639	13	0	4.297520661157025	13	0	0.6170458927882762	55	0	unmethylated (<10%)	Q8TBB0	THAP domain-containing protein 6	NA	hit, no GO BP
GN020666	Chromosome_7A	639	1	3	39.436619718309856	0.12136752136752137	NA	0	NA	NA	NA	NA	NA	NA	NA	0.44742729306487694	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017544	Chromosome_7A	2827	2	25	38.02617615847188	0.2506792369845425	67.68558951965065	6	1	67.68558951965065	6	1	NA	NA	NA	78.98248540450375	17	0.9411764705882353	methylated (>=50%)	Q14181	DNA polymerase alpha subunit B (DNA polymerase alpha 70 kDa subunit)	DNA replication [GO:0006260]; DNA replication initiation [GO:0006270]; DNA replication, synthesis of primer [GO:0006269]	hit with GO BP
GN017003	Chromosome_7A	9677	7	158	37.32561744342255	0.46890211289721095	80.56105610561056	135	0.8518518518518519	82.7212522576761	21	1	80.07807241889891	114	0.8245614035087719	18.55563234277816	36	0.2222222222222222	methylated (>=50%)	P0DMQ6	Sorbitol dehydrogenase (SDH) (EC 1.1.1.-) (Polyol dehydrogenase)	D-sorbitol biosynthetic process [GO:0006061]; D-sorbitol catabolic process [GO:0006062]; fructose biosynthetic process [GO:0046370]; fructose metabolic process [GO:0006000]	hit with GO BP
GN019239	Chromosome_7A	78449	66	878	35.96731634565131	0.3508235867597309	81.65735230076935	854	0.9309133489461359	84.62294276590518	157	0.9808917197452229	81.14328294656164	697	0.9196556671449068	1.0438413361169103	53	0	methylated (>=50%)	Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (EC 3.6.5.-) (Dardarin)	calcium-mediated signaling [GO:0019722]; canonical Wnt signaling pathway [GO:0060070]; cellular response to curcumin [GO:1904644]; cellular response to dopamine [GO:1903351]; cellular response to manganese ion [GO:0071287]; cellular response to oxidative stress [GO:0034599]; cellular response to reactive oxygen species [GO:0034614]; cellular response to starvation [GO:0009267]; determination of adult lifespan [GO:0008340]; endocytosis [GO:0006897]; endoplasmic reticulum organization [GO:0007029]; excitatory postsynaptic potential [GO:0060079]; exploration behavior [GO:0035640]; Golgi organization [GO:0007030]; GTP metabolic process [GO:0046039]; intracellular distribution of mitochondria [GO:0048312]; intracellular protein localization [GO:0008104]; intracellular signal transduction [GO:0035556]; JNK cascade [GO:0007254]; locomotory exploration behavior [GO:0035641]; lysosome organization [GO:0007040]; MAPK cascade [GO:0000165]; mitochondrion localization [GO:0051646]; mitochondrion organization [GO:0007005]; negative regulation of autophagosome assembly [GO:1902902]; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902236]; negative regulation of excitatory postsynaptic potential [GO:0090394]; negative regulation of GTPase activity [GO:0034260]; negative regulation of late endosome to lysosome transport [GO:1902823]; negative regulation of macroautophagy [GO:0016242]; negative regulation of motile cilium assembly [GO:1905504]; negative regulation of neuron projection development [GO:0010977]; negative regulation of protein localization to mitochondrion [GO:1903748]; negative regulation of protein processing [GO:0010955]; neuromuscular junction development [GO:0007528]; neuron projection arborization [GO:0140058]; neuron projection morphogenesis [GO:0048812]; olfactory bulb development [GO:0021772]; positive regulation of autophagy [GO:0010508]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of dopamine receptor signaling pathway [GO:0060161]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of microglial cell activation [GO:1903980]; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway [GO:1901030]; positive regulation of programmed cell death [GO:0043068]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of protein autoubiquitination [GO:1902499]; positive regulation of protein ubiquitination [GO:0031398]; positive regulation of synaptic vesicle endocytosis [GO:1900244]; positive regulation of tumor necrosis factor production [GO:0032760]; protein autophosphorylation [GO:0046777]; protein localization to endoplasmic reticulum exit site [GO:0070973]; protein localization to mitochondrion [GO:0070585]; protein phosphorylation [GO:0006468]; regulation of autophagy [GO:0010506]; regulation of branching morphogenesis of a nerve [GO:2000172]; regulation of CAMKK-AMPK signaling cascade [GO:1905289]; regulation of cAMP/PKA signal transduction [GO:0141161]; regulation of canonical Wnt signaling pathway [GO:0060828]; regulation of cell projection organization [GO:0031344]; regulation of dendritic spine morphogenesis [GO:0061001]; regulation of dopamine receptor signaling pathway [GO:0060159]; regulation of ER to Golgi vesicle-mediated transport [GO:0060628]; regulation of kidney size [GO:0035564]; regulation of locomotion [GO:0040012]; regulation of membrane potential [GO:0042391]; regulation of mitochondrial depolarization [GO:0051900]; regulation of mitochondrial fission [GO:0090140]; regulation of neuroblast proliferation [GO:1902692]; regulation of neuron maturation [GO:0014041]; regulation of protein stability [GO:0031647]; regulation of reactive oxygen species metabolic process [GO:2000377]; regulation of retrograde transport, endosome to Golgi [GO:1905279]; regulation of SNARE complex assembly [GO:0035542]; regulation of synaptic transmission, glutamatergic [GO:0051966]; regulation of synaptic vesicle endocytosis [GO:1900242]; regulation of synaptic vesicle exocytosis [GO:2000300]; regulation of synaptic vesicle transport [GO:1902803]; response to oxidative stress [GO:0006979]; Rho protein signal transduction [GO:0007266]; spermatogenesis [GO:0007283]; striatum development [GO:0021756]; tangential migration from the subventricular zone to the olfactory bulb [GO:0022028]; Wnt signalosome assembly [GO:1904887]	hit with GO BP
GN019236	Chromosome_7A	12029	11	176	35.239837060437274	0.47189077814243313	90.50448091833653	175	0.9657142857142857	92.27426364075326	69	0.9855072463768116	89.23821039903265	106	0.9528301886792453	8.01293568091987	51	0.0392156862745098	methylated (>=50%)	F1R4Y7	Centrosomal protein of 83 kDa (Cep83) (Coiled-coil domain-containing protein 41)	cilium assembly [GO:0060271]; establishment of centrosome localization [GO:0051660]	hit with GO BP
GN019404	Chromosome_7A	17155	13	222	37.3418828329933	0.3715881576051068	73.79935053836951	213	0.7981220657276995	81.82471264367815	34	0.8823529411764706	72.71580989330747	179	0.7821229050279329	19.851980844579888	34	0.2647058823529412	methylated (>=50%)	Q9HBM0	Vezatin	cell-cell adhesion [GO:0098609]	hit with GO BP
GN019405	Chromosome_7A	4577	5	83	39.48000873934892	0.465717066807893	89.72859148338793	74	0.972972972972973	89.22852983988355	23	1	89.82436576526345	51	0.9607843137254902	84.24559733460256	31	0.967741935483871	methylated (>=50%)	M9PBE2	E3 ubiquitin-protein ligase Hakai (EC 2.3.2.27)	actin filament organization [GO:0007015]; chitin-based cuticle development [GO:0040003]; dorsal closure [GO:0007391]; epithelial cell migration, open tracheal system [GO:0007427]; epithelium development [GO:0060429]; female sex determination [GO:0030237]; head involution [GO:0008258]; midgut development [GO:0007494]; protein ubiquitination [GO:0016567]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; regulation of cell adhesion [GO:0030155]; segmentation [GO:0035282]; sex differentiation [GO:0007548]	hit with GO BP
GN019406	Chromosome_7A	10324	12	164	37.28206121658272	0.4576144660503287	80.45574057843997	140	0.6785714285714286	67.62295081967213	19	0.631578947368421	81.99214916584887	121	0.6859504132231405	50.04378283712784	38	0.5526315789473685	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002557	Chromosome_7A	678	1	17	48.08259587020649	0.4361778618732261	0.36363636363636365	11	0	0.36363636363636365	11	0	NA	NA	NA	1.5730337078651686	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019230	Chromosome_7A	3368	3	88	35.54038004750594	0.8328902627511592	0.3888380603842635	88	0	0.5567928730512249	17	0	0.3454231433506045	71	0	0.5923000987166831	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016147	Chromosome_7A	273	1	7	40.29304029304029	0.637	0.7067137809187279	7	0	0.7067137809187279	7	0	NA	NA	NA	0.5852842809364549	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019976	Chromosome_7A	548	2	4	39.5985401459854	0.18629950705422404	67.6923076923077	4	1	67.6923076923077	4	1	NA	NA	NA	49.233844103930714	14	0.42857142857142855	NA	NA	NA	NA	no Swiss-Prot hit
GN020384	Chromosome_7A	1873	4	39	36.25200213561132	0.6339234574329602	11.623178583531006	39	0.07692307692307693	8.454206382096976	25	0.04	25.8364312267658	14	0.14285714285714285	0.4656938838869916	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020396	Chromosome_7A	892	3	16	36.88340807174888	0.5274205469327421	7.009626955475331	15	0	6.905187835420394	12	0	7.561436672967864	3	0	13.49502487562189	16	0.0625	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001353	Chromosome_7A	795	4	3	31.069182389937108	0.1569491971571466	4.8076923076923075	3	0	3.9840637450199203	2	0	8.19672131147541	1	0	15.336322869955158	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019110	Chromosome_7A	3346	4	53	34.817692767483564	0.5253151808142567	47.745358090185675	9	0.4444444444444444	51.77514792899408	6	0.6666666666666666	12.820512820512821	3	0	0.4409509202453988	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN017882	Chromosome_7A	949	1	78	67.43940990516333	0.7246828007518797	0	4	0	0	4	0	NA	NA	NA	1.6483516483516483	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002601	Chromosome_7A	6634	3	87	35.21254145312029	0.42468065693430657	63.488431222985	86	0.7558139534883721	81.00456621004567	25	0.88	56.73009161381255	61	0.7049180327868853	75.68943572337717	32	0.90625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019407	Chromosome_7A	10342	19	229	33.910268806807196	0.7714561755765275	0.4792928278276842	228	0	0.4205990972507181	72	0	0.502092050209205	156	0	0.4955810688031717	60	0	unmethylated (<10%)	O14522	Receptor-type tyrosine-protein phosphatase T (R-PTP-T) (EC 3.1.3.48) (Receptor-type tyrosine-protein phosphatase rho) (RPTP-rho)	cell adhesion [GO:0007155]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to interleukin-6 [GO:0071354]; homophilic cell-cell adhesion [GO:0007156]; negative regulation of cell migration [GO:0030336]; negative regulation of receptor signaling pathway via STAT [GO:1904893]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]	hit with GO BP
GN011517	Chromosome_7A	3508	6	57	40.022805017103764	0.40948158463287015	0.9679370840895342	49	0	1.16580310880829	28	0	0.7945516458569807	21	0	0.5803830528148578	93	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019227	Chromosome_7A	2719	2	112	41.154836336888565	0.9734616245245021	0.43859649122807015	112	0	0.2663115845539281	28	0	0.46893317702227433	84	0	0.5774783445620789	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019228	Chromosome_7A	6471	8	179	34.863235975892444	0.914174207118081	0.44964028776978415	179	0	0.23485204321277595	44	0	0.5076786394212464	135	0	0.6830309498399146	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019408	Chromosome_7A	1098	3	34	39.34426229508197	0.8003087015242137	0.36818851251840945	34	0	0.4329004329004329	27	0	0.2304147465437788	7	0	0.4329004329004329	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019224	Chromosome_7A	17842	4	450	36.17867952023316	0.7708774632333244	0.7863576098386138	445	0	0.6641366223908919	24	0	0.7925452711465488	421	0	0.7434944237918215	57	0	unmethylated (<10%)	P74897	Universal stress protein in QAH/OAS sulfhydrylase 3'region (USP)	NA	hit, no GO BP
GN019225	Chromosome_7A	4511	4	34	34.9811571713589	0.24683398646528207	86.71834625322997	34	1	88.88888888888889	8	1	85.87813620071685	26	1	89.7803247373448	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019226	Chromosome_7A	17427	16	236	37.60830894588857	0.38424965559960705	80.37806176783812	224	0.9330357142857143	84.52791178497588	67	0.9701492537313433	78.93856084150131	157	0.9171974522292994	63.53013530135301	22	0.8181818181818182	methylated (>=50%)	B9FAF3	Kinesin-like protein KIN-14E	microtubule-based movement [GO:0007018]; microtubule-based process [GO:0007017]	hit with GO BP
GN019222	Chromosome_7A	7069	3	146	37.614938463714815	0.5911706516272639	88.57105193778013	141	0.9645390070921985	87.46397694524495	23	1	88.68253047011028	118	0.9576271186440678	95.18105849582173	55	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019411	Chromosome_7A	36838	7	516	35.797274553450244	0.43910569986143333	71.00843991995127	508	0.7578740157480315	58.01857585139319	32	0.78125	71.64678675754625	476	0.7563025210084033	0.637213254035684	63	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019218	Chromosome_7A	1410	3	11	36.38297872340426	0.24117555590110404	91.74690508940853	11	1	91.32947976878613	3	1	91.87725631768953	8	1	93.9810834049871	49	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019219	Chromosome_7A	13972	9	236	33.924992842828516	0.5877867548545022	94.3093803786575	236	0.9957627118644068	93.47536617842876	26	1	94.38267992978349	210	0.9952380952380953	94.6012877662209	29	1	methylated (>=50%)	P40682	V-type proton ATPase subunit S1 (V-ATPase subunit S1) (V-ATPase Ac45 subunit) (V-ATPase S1 accessory protein) (Vacuolar proton pump subunit S1)	cellular response to increased oxygen levels [GO:0036295]; intracellular iron ion homeostasis [GO:0006879]; positive regulation of TORC1 signaling [GO:1904263]	hit with GO BP
GN019220	Chromosome_7A	23745	24	556	34.26405559065066	0.797974935107441	0.507909310650797	556	0	0.41484212952293154	89	0	0.5221563646627152	467	0	0.4387167534960241	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004630	Chromosome_7A	612	1	21	41.33986928104575	0.8031496062992126	0.8130081300813008	20	0	0.8130081300813008	20	0	NA	NA	NA	0.7194244604316546	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001827	Chromosome_7A	217	1	5	48.38709677419355	0.3936865021770682	NA	0	NA	NA	NA	NA	NA	NA	NA	1.0060362173038229	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012898	Chromosome_7A	618	1	10	44.66019417475728	0.3337834188495814	0.20920502092050208	9	0	0.20920502092050208	9	0	NA	NA	NA	2.601156069364162	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020388	Chromosome_7A	558	3	16	43.54838709677419	0.6070991432068543	32.71255060728745	16	0	34.496919917864474	14	0	26.053639846743295	2	0	9.805253623188406	64	0.015625	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019413	Chromosome_7A	33632	21	534	36.3522835394862	0.4808360488671865	89.97180295239674	522	0.9559386973180076	94.2017957692893	147	0.9863945578231292	88.79273776194113	375	0.944	16.663007683863885	64	0	methylated (>=50%)	Q07E28	Cortactin-binding protein 2 (CortBP2)	NA	hit, no GO BP
GN019414	Chromosome_7A	939	3	27	37.912673056443026	0.8032506415739948	1.1851851851851851	27	0	1.1098779134295227	19	0	1.3363028953229399	8	0	0.9837306091562619	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019211	Chromosome_7A	57214	34	997	35.36896563778096	0.5591167027004642	33.90100489665887	961	0.3048907388137357	36.63615864172967	197	0.27411167512690354	33.42491688215737	764	0.31282722513089006	70.01375515818432	58	0.7758620689655172	sparse (10-50%)	Q8BH65	Protein DENND6A (DENN domain-containing protein 6A)	positive regulation of cell-cell adhesion mediated by cadherin [GO:2000049]	hit with GO BP
GN019212	Chromosome_7A	12783	9	271	39.78721739810686	0.5356901458761966	79.167332587502	271	0.8044280442804428	80.09650180940892	22	0.9090909090909091	79.10141206675225	249	0.7951807228915663	52.563270603504215	37	0.5945945945945946	methylated (>=50%)	Q641C8	Mitochondrial S-adenosylmethionine carrier protein (SAM carrier) (Solute carrier family 25 member 26)	mitochondrial S-adenosyl-L-methionine transmembrane transport [GO:1990543]; S-adenosyl-L-methionine transport [GO:0015805]	hit with GO BP
GN019213	Chromosome_7A	4035	3	59	35.985130111524164	0.45498937373860926	74.882713821725	55	0.8545454545454545	80.72562358276645	11	0.8181818181818182	73.77682403433477	44	0.8636363636363636	48.57324032974001	44	0.5681818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019214	Chromosome_7A	16707	12	558	37.68480277727898	0.9407376528830147	0.9650772879692484	549	0	0.632295719844358	122	0	1.032346868547832	427	0	0.45610034207525657	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020462	Chromosome_7A	1292	3	21	33.6687306501548	0.5735667174023339	32	21	0.2857142857142857	28.296296296296298	19	0.3157894736842105	43.111111111111114	2	0	1.6840019811788014	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019210	Chromosome_7A	18130	7	237	33.3811362382791	0.47084716788849074	78.36541708882135	237	0.890295358649789	79.0167865707434	15	0.8	78.32653353374847	222	0.8963963963963963	2.991256327657616	42	0	methylated (>=50%)	Q32LN1	Ubiquitin-conjugating enzyme E2 H (EC 2.3.2.23) ((E3-independent) E2 ubiquitin-conjugating enzyme H) (EC 2.3.2.24) (E2 ubiquitin-conjugating enzyme H) (Ubiquitin carrier protein H) (Ubiquitin-protein ligase H)	protein K11-linked ubiquitination [GO:0070979]; protein K48-linked ubiquitination [GO:0070936]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN019209	Chromosome_7A	8005	7	133	37.17676452217364	0.48094301719788063	81.0182767624021	130	0.8769230769230769	85.23610280932456	33	0.8787878787878788	79.83965258059128	97	0.8762886597938144	3.1189710610932475	50	0	methylated (>=50%)	A1YFA7	Polyglutamine-binding protein 1 (PQBP-1) (Polyglutamine tract-binding protein 1)	activation of innate immune response [GO:0002218]; alternative mRNA splicing, via spliceosome [GO:0000380]; cellular response to exogenous dsRNA [GO:0071360]; defense response to virus [GO:0051607]; neuron projection development [GO:0031175]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of type I interferon production [GO:0032481]	hit with GO BP
GN019415	Chromosome_7A	934	2	24	34.58244111349036	0.9300472989793378	83.30229671011794	24	1	90.81272084805654	6	1	81.70180722891567	18	1	81.23689727463312	31	0.967741935483871	methylated (>=50%)	O77469	Fibulin-1	extracellular matrix organization [GO:0030198]; intracellular protein localization [GO:0008104]; positive regulation of locomotion [GO:0040017]	hit with GO BP
GN019416	Chromosome_7A	10613	9	180	34.928860831056255	0.5584646417399948	83.20325203252033	180	0.9611111111111111	84.84042553191489	27	1	83.03795202291442	153	0.954248366013072	73.32549941245594	14	0.8571428571428571	methylated (>=50%)	Q9WVJ9	EGF-containing fibulin-like extracellular matrix protein 2 (Fibulin-4) (FIBL-4) (Mutant p53-binding protein 1)	aorta development [GO:0035904]; aorta smooth muscle tissue morphogenesis [GO:0060414]; artery development [GO:0060840]; elastic fiber assembly [GO:0048251]; negative regulation of vascular associated smooth muscle cell proliferation [GO:1904706]; positive regulation of aortic smooth muscle cell differentiation [GO:1904831]; positive regulation of collagen fibril organization [GO:1904028]; positive regulation of smooth muscle cell-matrix adhesion [GO:1905609]; regulation of collagen fibril organization [GO:1904026]; vascular associated smooth muscle cell development [GO:0097084]	hit with GO BP
GN019208	Chromosome_7A	7357	3	136	35.25893706673916	0.5950237075335423	85.4978635245371	130	0.8461538461538461	67.65834932821497	30	0.4666666666666667	88.2801975752133	100	0.96	0.5	96	0	methylated (>=50%)	Q86UP9	LHFPL tetraspan subfamily member 3 protein (Lipoma HMGIC fusion partner-like 3 protein)	sensory perception of sound [GO:0007605]	hit with GO BP
GN019418	Chromosome_7A	7102	8	80	37.369754998591944	0.32264860797592176	87.63535633341728	80	0.975	90.38031319910515	28	1	86.83782905427364	52	0.9615384615384616	73.58390682901006	24	0.9583333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019419	Chromosome_7A	3285	4	103	38.599695585996955	0.8460334407685326	1.5364916773367479	103	0	0.6793478260869565	23	0	1.7355632691700853	80	0	0.7228915662650602	56	0	unmethylated (<10%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN019420	Chromosome_7A	46411	34	745	36.230634978776585	0.49122709387422414	83.91362231197961	727	0.9504814305364512	88.40160642570281	141	1	83.18019531660191	586	0.9385665529010239	46.00389863547758	19	0.42105263157894735	methylated (>=50%)	Q9V4A7	Plexin-B	axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; motor neuron axon guidance [GO:0008045]; negative regulation of cell adhesion [GO:0007162]; olfactory bulb axon guidance [GO:0071678]; positive regulation of axonogenesis [GO:0050772]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; semaphorin-plexin signaling pathway [GO:0071526]; sensory neuron axon guidance [GO:0097374]; synapse assembly [GO:0007416]	hit with GO BP
GN019421	Chromosome_7A	15305	9	224	35.68768376347599	0.46626453064546314	77.1189550157775	222	0.8828828828828829	80.02125398512221	36	0.9444444444444444	76.65389527458493	186	0.8709677419354839	71.98198198198199	18	0.8888888888888888	methylated (>=50%)	P53356	Tyrosine-protein kinase HTK16 (EC 2.7.10.2)	NA	hit, no GO BP
GN019201	Chromosome_7A	4439	4	132	37.73372381166929	0.8361058552580886	0.6060606060606061	127	0	0.3937007874015748	37	0	0.6821924253116913	90	0	0.4285157771717959	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002373	Chromosome_7A	369	1	17	47.96747967479675	0.8146753246753247	1.0158013544018059	17	0	1.0158013544018059	17	0	NA	NA	NA	0.47410649161196206	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019197	Chromosome_7A	48652	49	667	35.0016443311683	0.45331555323106704	81.63168691810004	650	0.9415384615384615	83.34688897925986	157	0.9426751592356688	81.14300611186745	493	0.9411764705882353	35.85657370517928	43	0.32558139534883723	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019198	Chromosome_7A	2305	3	67	38.524945770065074	0.7911629098360655	0.4646360351058338	57	0	0.25316455696202533	18	0	0.5188067444876784	39	0	0.20562028786840303	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019422	Chromosome_7A	1459	2	45	39.067854694996576	0.8083500572512035	0.6178707224334601	45	0	0.5025125628140703	12	0	0.6447831184056272	33	0	0.46410891089108913	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019423	Chromosome_7A	9715	11	108	35.64590838908904	0.351781269446173	88.42962267105057	107	0.9532710280373832	92.78466741826381	37	1	86.75482332538478	70	0.9285714285714286	94.6053378762067	49	1	methylated (>=50%)	Q91783	Kinesin-like protein KIF11-A (Kinesin-5) (Kinesin-related motor protein Eg5-2) (XLEg5K2)	microtubule-based movement [GO:0007018]; mitotic spindle assembly [GO:0090307]; spindle elongation [GO:0051231]	hit with GO BP
GN019424	Chromosome_7A	7431	7	152	35.311532768133496	0.6596387705795473	86.44359811389191	151	0.9072847682119205	91.64156626506023	23	0.9565217391304348	85.73195876288659	128	0.8984375	0.6627680311890838	37	0	methylated (>=50%)	B2GU58	Kinesin-like protein KIF11 (Costal2)	microtubule-based movement [GO:0007018]; mitotic spindle assembly [GO:0090307]; spindle elongation [GO:0051231]	hit with GO BP
GN019425	Chromosome_7A	11910	7	380	39.252728799328295	0.8283321894303363	0.9111006900247873	380	0	0.6208425720620843	55	0	0.9627525252525253	325	0	0.5947955390334573	44	0	unmethylated (<10%)	P78504	Protein jagged-1 (Jagged1) (hJ1) (CD antigen CD339)	angiogenesis [GO:0001525]; aorta morphogenesis [GO:0035909]; aortic valve morphogenesis [GO:0003180]; cardiac neural crest cell development involved in outflow tract morphogenesis [GO:0061309]; cardiac right ventricle morphogenesis [GO:0003215]; cardiac septum morphogenesis [GO:0060411]; cell fate determination [GO:0001709]; distal tubule development [GO:0072017]; endocardial cushion cell development [GO:0061444]; endothelial cell differentiation [GO:0045446]; hemopoiesis [GO:0030097]; inner ear development [GO:0048839]; keratinocyte differentiation [GO:0030216]; loop of Henle development [GO:0072070]; myoblast differentiation [GO:0045445]; negative regulation of cell migration [GO:0030336]; negative regulation of cell-cell adhesion [GO:0022408]; negative regulation of cell-matrix adhesion [GO:0001953]; negative regulation of endothelial cell differentiation [GO:0045602]; negative regulation of stem cell differentiation [GO:2000737]; nephron development [GO:0072006]; nervous system development [GO:0007399]; neuronal stem cell population maintenance [GO:0097150]; Notch signaling pathway [GO:0007219]; podocyte development [GO:0072015]; positive regulation of cardiac epithelial to mesenchymal transition [GO:0062043]; positive regulation of Notch signaling pathway [GO:0045747]; positive regulation of transcription by RNA polymerase II [GO:0045944]; pulmonary artery morphogenesis [GO:0061156]; pulmonary valve morphogenesis [GO:0003184]; regulation of cell population proliferation [GO:0042127]; response to muramyl dipeptide [GO:0032495]; T cell mediated immunity [GO:0002456]	hit with GO BP
GN019426	Chromosome_7A	48610	47	649	34.7767948981691	0.4447394127812192	84.0967529069106	647	0.9629057187017002	88.1848018177228	151	0.9867549668874173	83.19777931991672	496	0.9556451612903226	2.9362880886426592	38	0	methylated (>=50%)	Q9HCE0	Ectopic P granules protein 5 homolog	autophagosome maturation [GO:0097352]; cellular response to dsDNA [GO:1990786]; endosome to lysosome transport [GO:0008333]; nucleotide transport [GO:0006862]; toll-like receptor 9 signaling pathway [GO:0034162]	hit with GO BP
GN019195	Chromosome_7A	10886	10	144	32.21568987690612	0.5107950379776534	72.63551727138258	144	0.8333333333333334	45.408532176428054	21	0.5714285714285714	76.36003956478734	123	0.8780487804878049	26.909600560616678	25	0.4	methylated (>=50%)	Q9CQM0	Nicolin-1 (Tubulin polyglutamylase complex subunit 5) (PGs5) (p24)	NA	hit, no GO BP
GN019194	Chromosome_7A	10393	6	166	37.10189550659098	0.47875203094670216	83.56445814072933	137	0.9197080291970803	93.40463458110517	58	1	81.22483577029031	79	0.8607594936708861	53.54330708661417	17	0.5882352941176471	methylated (>=50%)	P52907	F-actin-capping protein subunit alpha-1 (CapZ alpha-1)	barbed-end actin filament capping [GO:0051016]; cell junction assembly [GO:0034329]; protein-containing complex assembly [GO:0065003]	hit with GO BP
GN019181	Chromosome_7A	6601	4	129	36.11574003938797	0.6015598342676091	83.53252125948057	128	0.90625	68.41138659320478	17	0.5882352941176471	85.6955208196506	111	0.954954954954955	10.218978102189782	50	0.02	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019182	Chromosome_7A	36857	16	405	34.20788452668421	0.3816539746413126	82.3318804483188	384	0.9557291666666666	88.05970149253731	36	1	81.84581609389512	348	0.9511494252873564	46.39311714096625	32	0.3125	methylated (>=50%)	Q7ZVX6	NEDD8-activating enzyme E1 catalytic subunit (EC 6.2.1.64) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) (Ubiquitin-like modifier-activating enzyme 3) (Ubiquitin-activating enzyme 3)	protein neddylation [GO:0045116]	hit with GO BP
GN019183	Chromosome_7A	1842	3	32	36.210640608034744	0.5326104635402548	65.53369111508647	32	0.46875	70.53824362606233	21	0.5238095238095238	56.957928802588995	11	0.36363636363636365	66.1634565330557	30	0.6666666666666666	methylated (>=50%)	Q56P28	PRA1 family protein 3 (ADP-ribosylation factor-like protein 6-interacting protein 5) (ARL-6-interacting protein 5) (Aip-5)	L-glutamate transmembrane transport [GO:0015813]; negative regulation of L-glutamate import across plasma membrane [GO:0002037]; negative regulation of transport [GO:0051051]	hit with GO BP
GN019187	Chromosome_7A	6690	2	178	34.2152466367713	0.9091977998821147	0.6636441290492148	159	0	0.7076514816452897	26	0	0.6559654267633894	133	0	1.0184287099903007	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019186	Chromosome_7A	6592	6	204	35.83131067961165	0.964173865161579	0.6226096237658988	204	0	0.6836544437538844	45	0	0.6124143657878347	159	0	0.6535947712418301	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019184	Chromosome_7A	2715	3	79	37.49539594843462	0.8281274131274131	0.7826887661141805	79	0	1.0299166257969592	40	0	0.5639913232104121	39	0	0.5757715338553662	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019185	Chromosome_7A	324	1	8	38.58024691358025	0.676056338028169	0.29673590504451036	8	0	0.29673590504451036	8	0	NA	NA	NA	0.9408602150537635	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002882	Chromosome_7A	273	1	13	43.223443223443226	1.0438235294117648	1.0294117647058822	13	0	1.0294117647058822	13	0	NA	NA	NA	1.187335092348285	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016395	Chromosome_7A	492	1	25	42.27642276422764	1.1581920903954803	1.5720524017467248	25	0	1.5720524017467248	25	0	NA	NA	NA	1.122586439155815	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013243	Chromosome_7A	613	2	15	45.67699836867863	0.47204681965193285	16.204690831556505	15	0	13.172043010752688	13	0	27.835051546391753	2	0	19.10112359550562	21	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001417	Chromosome_7A	1052	1	80	66.34980988593156	0.6914229378902399	NA	0	NA	NA	NA	NA	NA	NA	NA	1.6129032258064515	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018827	Chromosome_7A	1440	1	51	45.833333333333336	0.6820524727188298	0	3	0	0	3	0	NA	NA	NA	0.22484541877459246	34	0	NA	O02373	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; mesoderm migration involved in gastrulation [GO:0007509]; segment polarity determination [GO:0007367]; UDP-glucuronate biosynthetic process [GO:0006065]	hit with GO BP
GN020593	Chromosome_7A	554	1	6	34.65703971119134	0.36970303636970303	0	6	0	0	6	0	NA	NA	NA	0.6692160611854685	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019427	Chromosome_7A	1942	3	16	33.26467559217302	0.2978727483630995	1.5492957746478873	16	0	0	5	0	2.576112412177986	11	0	0.6180469715698393	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020034	Chromosome_7A	558	2	4	33.691756272401435	0.25752855659397716	0.8522727272727273	4	0	0	1	0	1.1320754716981132	3	0	0.3778932451582428	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019428	Chromosome_7A	9180	6	168	38.148148148148145	0.5735355642700553	24.13376309427881	168	0.09523809523809523	15.303541315345699	62	0.03225806451612903	28.261726448561294	106	0.1320754716981132	8.870967741935484	40	0	sparse (10-50%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN019172	Chromosome_7A	1414	3	30	36.7043847241867	0.6302183925122568	0.5804749340369393	30	0	1.1363636363636365	6	0	0.41237113402061853	24	0	0.3939223410241981	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019429	Chromosome_7A	9546	6	245	35.585585585585584	0.8108903682130226	0.5481080367166348	245	0	0.6080259424402108	54	0	0.5364468286525718	191	0	3.1804413673734313	73	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN019173	Chromosome_7A	4151	6	88	37.5813057094676	0.6061623831775701	0.7418777180864671	88	0	0.7768666378938283	53	0	0.6909547738693468	35	0	0.2870028700287003	55	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN019174	Chromosome_7A	1754	3	50	34.89167616875713	0.9370959641830596	0.74360499702558	50	0	0.5789909015715468	23	0	0.8360427310729215	27	0	0.5514705882352942	37	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN019171	Chromosome_7A	7825	6	225	34.53035143769968	0.9655979755965935	0.32292787944025836	224	0	0.28182245185533117	57	0	0.3326311120966848	167	0	0.5325218714340053	51	0	unmethylated (<10%)	P27473	Interferon-induced protein 44 (Antigen p44) (Non-A non-B hepatitis-associated microtubular aggregates protein)	immune response [GO:0006955]; response to virus [GO:0009615]	hit with GO BP
GN001355	Chromosome_7A	429	1	19	41.72494172494172	1.0214285714285714	0.814663951120163	19	0	0.814663951120163	19	0	NA	NA	NA	0.4812951214176329	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019430	Chromosome_7A	5648	6	128	35.69405099150141	0.7119178168525871	0.6470325747434181	127	0	0.6806930693069307	49	0	0.6280530355896721	78	0	0.513405590416429	52	0	unmethylated (<10%)	Q53G44	Interferon-induced protein 44-like	defense response to virus [GO:0051607]; immune response [GO:0006955]	hit with GO BP
GN019431	Chromosome_7A	1876	4	27	31.87633262260128	0.5731355443158288	63.215859030837	27	0.5185185185185185	40.483383685800604	12	0.3333333333333333	76.25649913344887	15	0.6666666666666666	38.02857142857143	60	0.5166666666666667	methylated (>=50%)	Q9D581	EF-hand calcium-binding domain-containing protein 10	NA	hit, no GO BP
GN019432	Chromosome_7A	9042	10	150	37.558062375580626	0.47046132126684276	90.37150410463336	150	0.9933333333333333	94.93392070484582	60	1	87.58682500560161	90	0.9888888888888889	92.7797833935018	19	1	methylated (>=50%)	Q6NRH0	Kelch-like protein 12	COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein monoubiquitination [GO:0006513]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN019433	Chromosome_7A	43022	16	508	36.28608618846172	0.36047836437991126	78.43258816235732	498	0.8755020080321285	87.43169398907104	48	0.9791666666666666	77.64915758176413	450	0.8644444444444445	85.43398736282009	41	1	methylated (>=50%)	Q00536	Cyclin-dependent kinase 16 (EC 2.7.11.22) (Cell division protein kinase 16) (PCTAIRE-motif protein kinase 1) (Serine/threonine-protein kinase PCTAIRE-1)	exocytosis [GO:0006887]; growth hormone secretion [GO:0030252]; neuron projection development [GO:0031175]; positive regulation of autophagy [GO:0010508]; protein phosphorylation [GO:0006468]; regulation of cell cycle phase transition [GO:1901987]; regulation of insulin secretion involved in cellular response to glucose stimulus [GO:0061178]; spermatogenesis [GO:0007283]	hit with GO BP
GN019434	Chromosome_7A	1608	1	22	47.201492537313435	0.29596412556053814	96.2406015037594	10	1	96.2406015037594	10	1	NA	NA	NA	95.12040557667935	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019435	Chromosome_7A	10733	16	184	39.476381254076216	0.44217320610457994	71.2256642586017	160	0.85	61.47812971342383	83	0.7951807228915663	77.88540807914262	77	0.9090909090909091	70.83333333333333	33	0.7272727272727273	methylated (>=50%)	Q96M69	Leucine-rich repeat and guanylate kinase domain-containing protein	axoneme assembly [GO:0035082]; spermatogenesis [GO:0007283]	hit with GO BP
GN019150	Chromosome_7A	1298	2	40	39.907550077041606	0.7762577558495926	0.7246376811594203	40	0	1.520912547528517	9	0	0.5371530886302597	31	0	0.779510022271715	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019436	Chromosome_7A	13144	9	218	34.61655508216677	0.5538299300162975	89.44857583836117	208	0.9278846153846154	89.89845002672368	44	0.9318181818181818	89.38060243882742	164	0.926829268292683	62.257495590828924	56	0.6071428571428571	methylated (>=50%)	Q13569	G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.29) (Thymine-DNA glycosylase) (hTDG)	base-excision repair [GO:0006284]; base-excision repair, AP site formation [GO:0006285]; chromosomal 5-methylcytosine DNA demethylation, oxidation pathway [GO:0141167]; depyrimidination [GO:0045008]; epigenetic regulation of gene expression [GO:0040029]; regulation of embryonic development [GO:0045995]	hit with GO BP
GN019437	Chromosome_7A	17728	10	442	35.59341155234657	0.7875207953745198	1.2200186896480116	433	0	0.29411764705882354	26	0	1.2903586191486984	407	0	0.6485610052695582	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019438	Chromosome_7A	11346	3	310	34.717080909571656	0.9075886555933725	1.9776268477826608	301	0.019933554817275746	0	25	0	2.1235521235521237	276	0.021739130434782608	4.411764705882353	4	0	unmethylated (<10%)	P42325	Neurocalcin homolog (DrosNCa)	negative regulation of neuronal signal transduction [GO:1902848]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN019154	Chromosome_7A	22510	14	262	36.694802310084405	0.3457688573279726	82.612302951286	258	0.8333333333333334	73.60742705570291	50	0.76	84.00629619490829	208	0.8509615384615384	0.3007518796992481	27	0	methylated (>=50%)	Q3SZP5	Peroxisomal acyl-coenzyme A oxidase 1 (AOX) (EC 1.3.3.6) (Palmitoyl-CoA oxidase) (Peroxisomal fatty acyl-CoA oxidase) (Straight-chain acyl-CoA oxidase) [Cleaved into: Peroxisomal acyl-CoA oxidase 1, A chain; Peroxisomal acyl-CoA oxidase 1, B chain; Peroxisomal acyl-CoA oxidase 1, C chain]	fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; fatty acid catabolic process [GO:0009062]; fatty acid oxidation [GO:0019395]; generation of precursor metabolites and energy [GO:0006091]; hydrogen peroxide biosynthetic process [GO:0050665]; lipid metabolic process [GO:0006629]; prostaglandin metabolic process [GO:0006693]; very long-chain fatty acid beta-oxidation [GO:0140493]; very long-chain fatty acid metabolic process [GO:0000038]	hit with GO BP
GN019147	Chromosome_7A	5498	3	113	38.25027282648236	0.5679544374154386	89.86708095977905	113	0.9646017699115044	91.11850524699258	69	0.9710144927536232	87.27465535524921	44	0.9545454545454546	12.341623650868137	35	0.14285714285714285	methylated (>=50%)	Q6P542	ATP-binding cassette sub-family F member 1	positive regulation of translation [GO:0045727]; translational initiation [GO:0006413]	hit with GO BP
GN020181	Chromosome_7A	743	2	6	42.395693135935396	0.18012121212121213	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016040	Chromosome_7A	213	1	13	53.990610328638496	0.8483455882352942	0	9	0	0	9	0	NA	NA	NA	0.4331348132106118	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019440	Chromosome_7A	9195	4	244	35.41054921152801	0.8482639093684922	0.6958119994748588	242	0	0.7901668129938543	22	0	0.6881873004611564	220	0	0.7203667321545514	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001270	Chromosome_7A	2384	6	25	38.422818791946305	0.2841952173187421	2.586206896551724	22	0	2.294455066921606	21	0	5.2631578947368425	1	0	4.618117229129663	62	0.016129032258064516	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001271	Chromosome_7A	255	1	5	54.11764705882353	0.27478448275862066	NA	0	NA	NA	NA	NA	NA	NA	NA	3.774928774928775	72	0.013888888888888888	NA	NA	NA	NA	no Swiss-Prot hit
GN019142	Chromosome_7A	9692	6	169	34.56458935204292	0.5879157581141591	66.99189432602822	164	0.7682926829268293	50.582901554404145	23	0.5217391304347826	69.14261460101868	141	0.8085106382978723	0.2501563477173233	30	0	methylated (>=50%)	Q7T0P7	Mitochondrial inner membrane protease ATP23 homolog (EC 3.4.24.-)	mitochondrial protein processing [GO:0034982]; mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]	hit with GO BP
GN020383	Chromosome_7A	347	2	5	38.61671469740634	0.39360254083484575	2.5316455696202533	5	0	2.5316455696202533	5	0	NA	NA	NA	1.4148980441115273	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020536	Chromosome_7A	867	2	12	37.94694348327566	0.38838285799611766	11.235955056179776	7	0	11.320754716981131	5	0	11.11111111111111	2	0	9.590878604963113	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019151	Chromosome_7A	861	2	20	36.81765389082462	0.6897380437394857	0.471976401179941	20	0	0.40816326530612246	10	0	0.6382978723404256	10	0	0.2506265664160401	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019136	Chromosome_7A	2522	4	102	40.00793021411578	1.0151777046385528	0.6196377502383222	101	0	0.6111535523300229	28	0	0.6234845860755109	73	0	0.9635974304068522	59	0	unmethylated (<10%)	Q9WTS8	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of interleukin-8 production [GO:0032757]	hit with GO BP
GN019135	Chromosome_7A	4071	4	93	36.379267993122085	0.6944958066433335	90.26670332691779	93	0.978494623655914	93.83378016085791	25	1	89.61819658813972	68	0.9705882352941176	88.49462365591398	34	1	methylated (>=50%)	Q4VSN1	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)	cellular response to fibroblast growth factor stimulus [GO:0044344]; embryonic organ development [GO:0048568]; negative regulation of apoptotic process [GO:0043066]; notochord cell vacuolation [GO:0060036]; notochord morphogenesis [GO:0048570]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of fibroblast growth factor receptor signaling pathway [GO:0045743]	hit with GO BP
GN012829	Chromosome_7A	1026	1	47	48.732943469785575	0.7717495678893797	0.19455252918287938	10	0	0.19455252918287938	10	0	NA	NA	NA	0.3337041156840934	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019134	Chromosome_7A	24271	21	357	35.58155823822669	0.4659619760698818	82.87904213343009	357	0.9523809523809523	84.76018566271274	78	0.9743589743589743	82.47757415662319	279	0.946236559139785	84.30717863105176	41	1	methylated (>=50%)	Q5RC32	Stabilizer of axonemal microtubules 6 (Nuclear protein MDM1)	negative regulation of centriole replication [GO:0046600]; retina development in camera-type eye [GO:0060041]	hit with GO BP
GN019133	Chromosome_7A	5525	7	72	33.10407239819005	0.48890199837770076	91.76048294991027	71	0.9859154929577465	92.38095238095238	19	1	91.54589371980677	52	0.9807692307692307	92.58202567760343	36	1	methylated (>=50%)	Q13371	Phosducin-like protein (PHLP)	heterotrimeric G-protein complex assembly [GO:1902605]; positive regulation of smoothened signaling pathway [GO:0045880]; regulation of G protein-coupled receptor signaling pathway [GO:0008277]; signal transduction [GO:0007165]	hit with GO BP
GN019442	Chromosome_7A	2188	2	82	41.087751371115175	0.8896514107204839	0.5948215535339398	80	0	0.7838014369693012	54	0	0.37678975131876413	26	0	0.38235294117647056	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001733	Chromosome_7A	192	1	13	54.166666666666664	1.0196078431372548	0.6451612903225806	13	0	0.6451612903225806	13	0	NA	NA	NA	0.6018916595012898	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019131	Chromosome_7A	10375	3	242	33.5710843373494	0.8284499086007668	0.969142502713599	240	0	0.3460207612456747	19	0	1.0140470451334054	221	0	0.49382716049382713	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019443	Chromosome_7A	11666	5	390	36.29350248585634	1.0173643837270534	0.8016158555829073	383	0	0.35335689045936397	26	0	0.8455780426947602	357	0	0.6485985638174658	63	0	unmethylated (<10%)	B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Skeletal organic matrix MAM and LDL-receptor 2) (SOM MAM and LDL-receptor 2)	NA	hit, no GO BP
GN019444	Chromosome_7A	2363	4	58	35.294117647058826	0.7886229853442969	84.97913769123782	58	0.8793103448275862	68.36969001148105	21	0.6666666666666666	93.7708903068976	37	1	59.94832041343669	58	0.603448275862069	methylated (>=50%)	O60870	DNA/RNA-binding protein KIN17 (Binding to curved DNA) (KIN, antigenic determinant of recA protein homolog)	DNA damage response [GO:0006974]; DNA replication [GO:0006260]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN019445	Chromosome_7A	16282	11	313	35.597592433361996	0.6085097364237232	86.93744838976053	313	0.9552715654952076	86.2532299741602	75	0.92	87.10821617438411	238	0.9663865546218487	67.91581108829568	46	0.6304347826086957	methylated (>=50%)	Q5R5P3	Threonine synthase-like 1 (TSH1)	NA	hit, no GO BP
GN019446	Chromosome_7A	10594	5	83	27.572210685293562	0.4274349102646367	17.54140890041908	83	0.2289156626506024	36.15819209039548	23	0.5652173913043478	10.208623087621698	60	0.1	0.6778309409888357	39	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019447	Chromosome_7A	25638	11	288	33.40354161791091	0.40434510824848263	68.74518860662047	280	0.6892857142857143	70.57926829268293	22	0.8181818181818182	68.59069020866774	258	0.6782945736434108	22.50602409638554	39	0.20512820512820512	methylated (>=50%)	Q5BKN5	Translation initiation factor eIF2 assembly protein (Cell division cycle protein 123 homolog)	eukaryotic translation initiation factor 2 complex assembly [GO:1905143]	hit with GO BP
GN019128	Chromosome_7A	18913	9	521	34.785597208269444	0.9107891518768665	1.0926665265812145	521	0	0.3779289493575208	60	0	1.1656631156399568	461	0	0.28109627547434995	46	0	unmethylated (<10%)	Q61603	Glycine receptor subunit alpha-4	chloride transmembrane transport [GO:1902476]; response to amino acid [GO:0043200]	hit with GO BP
GN019127	Chromosome_7A	17512	12	239	34.52489721333942	0.45858764356859166	77.7963893541783	237	0.8354430379746836	72.83726557773744	37	0.7297297297297297	78.36305820544726	200	0.855	13.187641296156745	37	0	methylated (>=50%)	Q16539	Mitogen-activated protein kinase 14 (MAP kinase 14) (MAPK 14) (EC 2.7.11.24) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAP kinase MXI2) (MAX-interacting protein 2) (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) (SAPK2a)	3'-UTR-mediated mRNA stabilization [GO:0070935]; cell surface receptor signaling pathway [GO:0007166]; cellular response to ionizing radiation [GO:0071479]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to lipoteichoic acid [GO:0071223]; cellular response to UV-B [GO:0071493]; cellular response to vascular endothelial growth factor stimulus [GO:0035924]; cellular response to virus [GO:0098586]; cellular senescence [GO:0090398]; chemotaxis [GO:0006935]; intracellular signal transduction [GO:0035556]; MAPK cascade [GO:0000165]; negative regulation of hippo signaling [GO:0035331]; negative regulation of inflammatory response to antigenic stimulus [GO:0002862]; osteoclast differentiation [GO:0030316]; p38MAPK cascade [GO:0038066]; platelet activation [GO:0030168]; positive regulation of cyclase activity [GO:0031281]; positive regulation of erythrocyte differentiation [GO:0045648]; positive regulation of gene expression [GO:0010628]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of muscle cell differentiation [GO:0051149]; positive regulation of myoblast differentiation [GO:0045663]; positive regulation of myoblast fusion [GO:1901741]; positive regulation of myotube differentiation [GO:0010831]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; regulation of cytokine production involved in inflammatory response [GO:1900015]; regulation of transcription by RNA polymerase II [GO:0006357]; signal transduction [GO:0007165]; signal transduction in response to DNA damage [GO:0042770]; stress-activated MAPK cascade [GO:0051403]; stress-activated protein kinase signaling cascade [GO:0031098]; stress-induced premature senescence [GO:0090400]; vascular endothelial growth factor receptor signaling pathway [GO:0048010]	hit with GO BP
GN019449	Chromosome_7A	1225	4	53	40.48979591836735	1.0589971944933776	0.5571030640668524	53	0	0.5730659025787965	40	0	0.5141388174807198	13	0	0.683371298405467	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019125	Chromosome_7A	1168	3	41	39.726027397260275	0.897787776527934	0.5516154452324665	41	0	0.6263048016701461	33	0	0.3215434083601286	8	0	0.6820566631689402	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019124	Chromosome_7A	3043	3	106	36.6086099244167	1.0406439540585881	0.8091706001348618	106	0	0.9107468123861566	41	0	0.7701283547257877	65	0	1.0493179433368311	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019450	Chromosome_7A	1703	4	34	35.701702877275395	0.6273579283818191	0.20847810979847117	34	0	0.2607561929595828	19	0	0.1488095238095238	15	0	2.1547156481808547	80	0	unmethylated (<10%)	P07948	Tyrosine-protein kinase Lyn (EC 2.7.10.2) (Lck/Yes-related novel protein tyrosine kinase) (V-yes-1 Yamaguchi sarcoma viral related oncogene homolog) (p53Lyn) (p56Lyn)	B cell homeostasis [GO:0001782]; B cell proliferation [GO:0042100]; C-X-C chemokine receptor CXCR4 signaling pathway [GO:0038159]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; cellular response to heat [GO:0034605]; cellular response to retinoic acid [GO:0071300]; dendritic cell differentiation [GO:0097028]; DNA damage checkpoint signaling [GO:0000077]; DNA damage response [GO:0006974]; eosinophil differentiation [GO:0030222]; ephrin receptor signaling pathway [GO:0048013]; erythrocyte differentiation [GO:0030218]; fatty acid transport [GO:0015908]; Fc receptor mediated inhibitory signaling pathway [GO:0002774]; Fc receptor mediated stimulatory signaling pathway [GO:0002431]; Fc-epsilon receptor signaling pathway [GO:0038095]; Fc-gamma receptor signaling pathway involved in phagocytosis [GO:0038096]; growth hormone receptor signaling pathway via JAK-STAT [GO:0060397]; hematopoietic progenitor cell differentiation [GO:0002244]; histamine secretion by mast cell [GO:0002553]; immune response-regulating cell surface receptor signaling pathway [GO:0002768]; inflammatory response [GO:0006954]; interleukin-5-mediated signaling pathway [GO:0038043]; leukocyte migration [GO:0050900]; lipopolysaccharide-mediated signaling pathway [GO:0031663]; negative regulation of B cell receptor signaling pathway [GO:0050859]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of immune response [GO:0050777]; negative regulation of inflammatory response to antigenic stimulus [GO:0002862]; negative regulation of intracellular signal transduction [GO:1902532]; negative regulation of MAP kinase activity [GO:0043407]; negative regulation of mast cell proliferation [GO:0070667]; negative regulation of protein phosphorylation [GO:0001933]; negative regulation of toll-like receptor 2 signaling pathway [GO:0034136]; negative regulation of toll-like receptor 4 signaling pathway [GO:0034144]; neuron projection development [GO:0031175]; oligodendrocyte development [GO:0014003]; peptidyl-tyrosine phosphorylation [GO:0018108]; platelet degranulation [GO:0002576]; positive regulation of amyloid precursor protein catabolic process [GO:1902993]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of dendritic cell apoptotic process [GO:2000670]; positive regulation of Fc receptor mediated stimulatory signaling pathway [GO:0060369]; positive regulation of glial cell proliferation [GO:0060252]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of mast cell proliferation [GO:0070668]; positive regulation of neuron projection development [GO:0010976]; positive regulation of oligodendrocyte progenitor proliferation [GO:0070447]; positive regulation of phosphorylation [GO:0042327]; positive regulation of toll-like receptor 4 signaling pathway [GO:0034145]; positive regulation of toll-like receptor 9 signaling pathway [GO:0034165]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of B cell receptor signaling pathway [GO:0050855]; regulation of cell adhesion mediated by integrin [GO:0033628]; regulation of cytokine production [GO:0001817]; regulation of ERK1 and ERK2 cascade [GO:0070372]; regulation of erythrocyte differentiation [GO:0045646]; regulation of mast cell activation [GO:0033003]; regulation of mast cell degranulation [GO:0043304]; regulation of monocyte chemotaxis [GO:0090025]; regulation of platelet aggregation [GO:0090330]; regulation of protein phosphorylation [GO:0001932]; regulation of release of sequestered calcium ion into cytosol [GO:0051279]; response to amino acid [GO:0043200]; response to axon injury [GO:0048678]; response to carbohydrate [GO:0009743]; response to hormone [GO:0009725]; response to insulin [GO:0032868]; response to sterol depletion [GO:0006991]; response to toxic substance [GO:0009636]; response to xenobiotic stimulus [GO:0009410]; signal transduction [GO:0007165]; stimulatory C-type lectin receptor signaling pathway [GO:0002223]; T cell costimulation [GO:0031295]; tolerance induction to self antigen [GO:0002513]	hit with GO BP
GN019451	Chromosome_7A	9423	2	263	36.03947787328876	0.8595766923426973	2.10298572046733	261	0	1.74496644295302	86	0	2.188841201716738	175	0	0.7342143906020558	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019452	Chromosome_7A	5858	5	100	34.141345168999656	0.5879879029870146	76.99579831932773	100	0.81	58.988015978695074	15	0.6	79.28293590394047	85	0.8470588235294118	1.112099644128114	43	0	methylated (>=50%)	Q62186	Translocon-associated protein subunit delta (TRAP-delta) (Signal sequence receptor subunit delta) (SSR-delta)	NA	hit, no GO BP
GN019453	Chromosome_7A	5477	4	215	40.02190980463757	0.9820323576015345	0.7274686784319009	215	0	0.6923200772822412	188	0	0.9075907590759076	27	0	0.43459365493263796	42	0	unmethylated (<10%)	Q14416	Metabotropic glutamate receptor 2 (mGluR2)	behavioral response to nicotine [GO:0035095]; chemical synaptic transmission [GO:0007268]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; glutamate secretion [GO:0014047]; negative regulation of adenylate cyclase activity [GO:0007194]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; regulation of glutamate secretion [GO:0014048]; regulation of response to drug [GO:2001023]; regulation of synaptic transmission, glutamatergic [GO:0051966]; response to cocaine [GO:0042220]	hit with GO BP
GN019454	Chromosome_7A	618	1	47	50	1.240857826384142	12.333333333333334	47	0	12.333333333333334	47	0	NA	NA	NA	54.969574036511155	54	0.6296296296296297	sparse (10-50%)	Q86UV5	Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.4.19.12) (Deubiquitinating enzyme 48) (Ubiquitin thioesterase 48) (Ubiquitin-specific peptidase 48) (Ubiquitin-specific protease 48) (Ubiquitin-specific-processing protease 48)	protein deubiquitination [GO:0016579]	hit with GO BP
GN019455	Chromosome_7A	12408	12	183	35.154738878143135	0.4797158546417	85.98312783906555	183	0.9836065573770492	82.37523689197725	22	1	86.60365058670143	161	0.9813664596273292	87.35387885228481	35	0.9714285714285714	methylated (>=50%)	Q6PJN8	DALR anticodon-binding domain-containing protein 3	arginyl-tRNA aminoacylation [GO:0006420]; tRNA C3-cytosine methylation [GO:0106217]	hit with GO BP
GN019456	Chromosome_7A	2819	4	89	38.3824051081944	0.8574538619275461	0.7531183807954813	89	0	0.7220216606498195	35	0	0.7730962504831852	54	0	1.8145956607495068	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019119	Chromosome_7A	11455	9	145	36.045395024006986	0.3900265813808229	58.47308031774051	145	0.5655172413793104	44.11134903640257	25	0.44	60.760572987721694	120	0.5916666666666667	41.410614525139664	31	0.3870967741935484	methylated (>=50%)	A8WIP6	Cyclin-dependent kinase 20 (EC 2.7.11.22) (Cell cycle-related kinase) (Cell division protein kinase 20)	cilium assembly [GO:0060271]	hit with GO BP
GN019457	Chromosome_7A	31176	19	390	34.98203746471645	0.41551145150864444	59.278260869565216	388	0.6417525773195877	83.79345603271983	99	0.9292929292929293	54.25398155909472	289	0.5432525951557093	1.1482607227288077	50	0	methylated (>=50%)	Q6P1C6	Leucine-rich repeats and immunoglobulin-like domains protein 3 (LIG-3)	otolith morphogenesis [GO:0032474]	hit with GO BP
GN019458	Chromosome_7A	7299	7	70	34.33347033840252	0.32686549976969137	86.41837644959857	70	0.9714285714285714	86.22366288492707	13	1	86.44944401344712	57	0.9649122807017544	94.08077994428969	27	1	methylated (>=50%)	P81928	Complex I assembly factor TIMMDC1, mitochondrial (RPII140-upstream gene protein) (Translocase of inner mitochondrial membrane domain-containing protein 1) (dTIMMDC1)	mitochondrial respiratory chain complex I assembly [GO:0032981]	hit with GO BP
GN019117	Chromosome_7A	1066	2	49	40.150093808630395	1.1421761567392634	0.7451564828614009	49	0	0.7449856733524355	43	0	0.746268656716418	6	0	0.8394259409694016	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019116	Chromosome_7A	4243	6	129	36.76643884044308	0.9061376323579077	0.7408550702268869	129	0	0.8588957055214724	40	0	0.701175500103114	89	0	0.42735042735042733	44	0	unmethylated (<10%)	P55083	Microfibril-associated glycoprotein 4	cellular response to UV-B [GO:0071493]; elastic fiber assembly [GO:0048251]; regulation of collagen metabolic process [GO:0010712]; supramolecular fiber organization [GO:0097435]; UV protection [GO:0009650]	hit with GO BP
GN019459	Chromosome_7A	2369	2	74	35.753482482059944	0.9825357859456794	0.5364806866952789	74	0	0.3824091778202677	31	0	0.6484483557202408	43	0	0.6729081334113517	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN010873	Chromosome_7A	1296	1	8	37.03703703703704	0.180050013892748	13.372093023255815	8	0	13.372093023255815	8	0	NA	NA	NA	7.124681933842239	7	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019460	Chromosome_7A	426	1	18	49.29577464788732	0.6955732946298984	5.882352941176471	2	0	5.882352941176471	2	0	NA	NA	NA	1.674641148325359	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017665	Chromosome_7A	2511	2	19	34.64755077658303	0.2523537999322952	21.061643835616437	19	0	20.689655172413794	13	0	21.39384116693679	6	0	13.70112155198545	14	0	sparse (10-50%)	Q9M2U3	Protein ALP1-like (EC 3.1.-.-)	NA	hit, no GO BP
GN019115	Chromosome_7A	40853	24	1062	35.11370034024429	0.8437304629386541	0.6685752190762141	1021	0	0.6450503139244861	198	0	0.6745658030180249	823	0	0.5364806866952789	48	0	unmethylated (<10%)	O15050	TPR and ankyrin repeat-containing protein 1 (Lupus brain antigen 1 homolog)	NA	hit, no GO BP
GN002612	Chromosome_7A	358	1	13	41.899441340782126	0.8279665539939512	0.966183574879227	13	0	0.966183574879227	13	0	NA	NA	NA	0.2518891687657431	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019114	Chromosome_7A	3993	6	38	34.18482344102179	0.32946259906633374	80.27210884353741	38	0.9736842105263158	87.68115942028986	20	1	75.28455284552845	18	0.9444444444444444	55.73170731707317	40	0.55	methylated (>=50%)	E1C7T6	tRNA wybutosine-synthesizing protein 5 (EC 1.14.11.42) (tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase)	wybutosine biosynthetic process [GO:0031591]	hit with GO BP
GN019461	Chromosome_7A	34174	12	1408	42.17826417744484	0.9264890675831498	0.8873890763654543	361	0	0.860446356547459	103	0	0.8955466905479117	258	0	0.4907621247113164	52	0	unmethylated (<10%)	Q8CJ11	Adhesion G protein-coupled receptor G2 (G protein-coupled receptor 64) (Rat epididymis-specific protein 6) (Re6) [Cleaved into: Adhesion G protein-coupled receptor G2, N-terminal fragment (ADGRG2 N-terminal fragment); Adhesion G protein-coupled receptor G2, C-terminal fragment (ADGRG2 C-terminal fragment)]	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; cell surface receptor signaling pathway [GO:0007166]; G protein-coupled receptor signaling pathway [GO:0007186]; phospholipase C-activating G protein-coupled receptor signaling pathway [GO:0007200]; spermatid development [GO:0007286]	hit with GO BP
GN010183	Chromosome_7A	758	2	10	34.300791556728235	0.44947817836812143	25.54806070826307	10	0	22.56267409470752	3	0	26.844014510278114	7	0	3.2885431400282887	58	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019112	Chromosome_7A	1462	2	30	38.03009575923392	0.5699064449064449	0.6237006237006237	27	0	0.975609756097561	7	0	0.5284015852047557	20	0	1.1111111111111112	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020994	Chromosome_7A	1684	4	39	35.57007125890736	0.7383971937398812	0.33975084937712347	39	0	0.3374578177727784	16	0	0.3409090909090909	23	0	0.34937888198757766	42	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN019463	Chromosome_7A	609	1	37	47.783251231527096	1.149056603773585	0.9824198552223371	36	0	0.9824198552223371	36	0	NA	NA	NA	0.9798270893371758	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011844	Chromosome_7A	1295	1	38	39.38223938223938	0.7567974901574803	6.48936170212766	35	0	6.48936170212766	35	0	NA	NA	NA	0.8232445520581114	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019107	Chromosome_7A	4584	3	124	36.082024432809774	0.8381825340299313	0.5491762356465302	124	0	0.6418485237483954	22	0	0.5167378117277016	102	0	0.7327586206896551	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019465	Chromosome_7A	2184	2	78	41.84981684981685	0.8157683024939663	0.8640120210368144	78	0	0.8072174738841406	60	0	1.079136690647482	18	0	0.49469964664310956	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019466	Chromosome_7A	9627	4	127	35.91980887088397	0.40967330116606354	88.32969772514802	119	0.9747899159663865	90.35743973399833	46	1	87.1136590229312	73	0.958904109589041	92.09758684699018	47	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019467	Chromosome_7A	30505	27	383	34.36158006884117	0.42648543656715326	76.58631859756098	360	0.8888888888888888	81.90104166666667	63	0.9206349206349206	75.67522321428571	297	0.8821548821548821	27.32887287699434	32	0.0625	methylated (>=50%)	Q8CDU4	F-box and leucine-rich repeat protein 13 (Dynein regulatory complex subunit 6) (F-box/LRR-repeat protein 13)	NA	hit, no GO BP
GN019468	Chromosome_7A	8117	8	140	37.95737341382284	0.48334218030120524	91.03205735154876	139	1	93.34456613310867	49	1	89.93823470810919	90	1	67.95758414015675	38	0.6578947368421053	methylated (>=50%)	Q04073	DNA-binding protein P3A2	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019469	Chromosome_7A	4040	4	101	35.99009900990099	0.7722399386810753	0.31912468657396853	101	0	0.2290950744558992	24	0	0.3414911781445646	77	0	0.6375227686703097	47	0	unmethylated (<10%)	C0HK24	L-rhamnose-binding lectin ELEL-1	NA	hit, no GO BP
GN019101	Chromosome_7A	4714	3	122	34.47178616885872	0.8713440723367635	0.6333775224628074	122	0	0.46439628482972134	33	0	0.6730944151355285	89	0	0.6042296072507553	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019102	Chromosome_7A	6467	5	109	34.7456316684707	0.5625991667597809	90.84644389546223	106	0.9905660377358491	94.06968124536694	25	1	90.1608325449385	81	0.9876543209876543	96.84119428818693	72	1	methylated (>=50%)	Q2KHU0	Phosphoserine phosphatase (PSP) (PSPase) (EC 3.1.3.3) (O-phosphoserine phosphohydrolase)	L-serine biosynthetic process [GO:0006564]; L-serine metabolic process [GO:0006563]	hit with GO BP
GN019471	Chromosome_7A	2001	3	39	35.88205897051474	0.6056812449066709	58.00185013876041	39	0.6410256410256411	34.196891191709845	4	0.5	60.33519553072626	35	0.6571428571428571	41.42011834319526	51	0.5294117647058824	methylated (>=50%)	Q9D0W5	Peptidyl-prolyl cis-trans isomerase-like 1 (PPIase) (EC 5.2.1.8) (Rotamase PPIL1)	embryonic brain development [GO:1990403]; mRNA splicing, via spliceosome [GO:0000398]; protein folding [GO:0006457]; protein peptidyl-prolyl isomerization [GO:0000413]	hit with GO BP
GN019472	Chromosome_7A	11024	7	335	37.30043541364296	0.8736514497299824	1.6322970531431062	334	0	0.6217408744484557	151	0	2.087663804789878	183	0	0.8866371120962635	40	0	unmethylated (<10%)	Q5U374	Kelch-like protein 12	anterior/posterior pattern specification [GO:0009952]; convergent extension involved in axis elongation [GO:0060028]; COPII vesicle coating [GO:0048208]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; neural crest cell development [GO:0014032]; neural crest formation [GO:0014029]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein monoubiquitination [GO:0006513]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN019473	Chromosome_7A	1566	1	60	40.804597701149426	0.9378368666906216	0.8922198429693077	60	0	0.8922198429693077	60	0	NA	NA	NA	1.7033651848774407	52	0	unmethylated (<10%)	Q5JXM2	Probable methyltransferase-like protein 24 (EC 2.1.1.-)	NA	hit, no GO BP
GN019093	Chromosome_7A	564	1	11	42.5531914893617	0.4315826086956522	88.82175226586102	11	1	88.82175226586102	11	1	NA	NA	NA	89.164265129683	23	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019094	Chromosome_7A	20238	11	422	34.66745725862239	0.6940031438200144	6.667577071455396	403	0	0.3367003367003367	40	0	7.1512567984712625	363	0	0.9168081494057725	45	0	unmethylated (<10%)	A2VD82	Tetratricopeptide repeat protein 38 (TPR repeat protein 38)	NA	hit, no GO BP
GN021312	Chromosome_7A	888	3	21	37.387387387387385	0.6797156916347731	14.53529000698812	13	0	14.338235294117647	12	0	15.160349854227405	1	0	12.535471930906848	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019474	Chromosome_7A	666	2	13	39.789789789789786	0.5153571428571428	0.16181229773462782	13	0	0.24096385542168675	10	0	0	3	0	0.49474335188620905	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019095	Chromosome_7A	663	2	10	39.969834087481146	0.39464285714285713	0.24449877750611246	10	0	0.31545741324921134	8	0	0	2	0	0.593990216631726	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019475	Chromosome_7A	31867	12	936	35.61678225123168	0.9269044861320042	10.906199037629104	865	0.057803468208092484	0.8966493629070316	40	0	11.352260778128286	825	0.06060606060606061	0.7742934572202865	59	0	sparse (10-50%)	A2VD82	Tetratricopeptide repeat protein 38 (TPR repeat protein 38)	NA	hit, no GO BP
GN019476	Chromosome_7A	1504	3	43	33.84308510638298	0.9985177865612648	0.5852231163130943	43	0	0.9233610341643582	22	0	0.3634161114476075	21	0	0.759493670886076	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004580	Chromosome_7A	4230	7	43	33.73522458628842	0.36178151888965354	2.3026315789473686	28	0	3.0428769017980635	14	0	1.631116687578419	14	0	9.712230215827338	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019477	Chromosome_7A	6158	5	146	35.30367002273466	0.7620479655536296	0.8823130175105199	146	0	0.7440476190476191	37	0	0.9131661962477171	109	0	0.8388256440982624	35	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN019478	Chromosome_7A	1489	2	25	39.28811282740094	0.4381679928433542	1.1703511053315996	25	0	2.857142857142857	14	0	0	11	0	1.3003095975232197	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019092	Chromosome_7A	1851	3	37	37.16909778498109	0.5862860077900954	0.36923076923076925	37	0	0.4073319755600815	34	0	0	3	0	0.4676258992805755	74	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN020178	Chromosome_7A	3970	6	37	33.95465994962217	0.3233753082071152	24.130105900151285	37	0	14.423076923076923	29	0	34.28792569659443	8	0	3.0740276035131746	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019479	Chromosome_7A	14536	7	164	35.40864061640066	0.36005141209573766	63.058047221363026	163	0.7177914110429447	65.95576619273302	31	0.967741935483871	62.623028578204675	132	0.6590909090909091	68.38709677419355	23	0.9130434782608695	methylated (>=50%)	O75030	Microphthalmia-associated transcription factor (Class E basic helix-loop-helix protein 32) (bHLHe32)	melanocyte differentiation [GO:0030318]; negative regulation of cell migration [GO:0030336]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of DNA-templated transcription initiation [GO:2000144]; positive regulation of gene expression [GO:0010628]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein-containing complex assembly [GO:0065003]; regulation of DNA-templated transcription [GO:0006355]; regulation of RNA biosynthetic process [GO:2001141]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019480	Chromosome_7A	6285	4	76	33.858392999204455	0.4219492028493894	62.34967622571693	76	0.75	80.58064516129032	33	0.9393939393939394	52.16294160057679	43	0.6046511627906976	75.75394447773118	69	0.6521739130434783	methylated (>=50%)	H3BNL1	Ciliary microtubule inner protein 7	NA	hit, no GO BP
GN019481	Chromosome_7A	9432	8	146	33.61959287531807	0.5483812647392159	78.38106603023071	146	0.9315068493150684	71.34920634920636	24	0.875	79.38835834470214	122	0.9426229508196722	63.286384976525824	21	0.7619047619047619	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019090	Chromosome_7A	8138	9	88	33.96411894814451	0.3763498046107244	91.97054068618645	83	0.9879518072289156	87.28	19	0.9473684210526315	93.32870048644892	64	1	92.86328460877043	18	1	methylated (>=50%)	Q90X38	G-patch domain and KOW motifs-containing protein (Protein T54-like)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN019091	Chromosome_7A	5979	8	171	36.812175949155375	0.8456440286841518	0.5128879537085744	171	0	0.6207674943566591	43	0	0.48010973936899864	128	0	0.6267409470752089	58	0	unmethylated (<10%)	P00639	Deoxyribonuclease-1 (EC 3.1.21.1) (Deoxyribonuclease I) (DNase I)	DNA catabolic process [GO:0006308]; neutrophil activation involved in immune response [GO:0002283]; regulation of acute inflammatory response [GO:0002673]; regulation of neutrophil mediated cytotoxicity [GO:0070948]	hit with GO BP
GN019088	Chromosome_7A	22314	5	599	35.66370888231604	0.8448323594373854	0.7069787370788924	471	0	0.3865979381443299	19	0	0.7208717518860017	452	0	0.8415147265077139	70	0	unmethylated (<10%)	Q7ZT75	Ficolin-1-A	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN019482	Chromosome_7A	743	2	32	39.30013458950202	1.1156156156156156	0.5668016194331984	32	0	0.6082725060827251	22	0	0.48426150121065376	10	0	0.5586592178770949	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019483	Chromosome_7A	7486	2	191	35.452845311247664	0.8125059311627124	0.6190034045187248	191	0	0.45385779122541603	23	0	0.6310894596988486	168	0	0.5441607367099205	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019484	Chromosome_7A	3500	3	113	40.857142857142854	0.7768473941729571	0.5728314238952537	113	0	0.48381094157052473	82	0	0.8171603677221655	31	0	1.9138755980861244	36	0	unmethylated (<10%)	H2A0L0	Tyrosinase-like protein 1 (EC 1.14.18.-) (Tyrosinase 1)	NA	hit, no GO BP
GN019485	Chromosome_7A	9797	3	240	34.10227620700214	0.843999629560232	0.9190371991247265	240	0	0.2032520325203252	20	0	0.9743831526009744	220	0	0.5740057400574006	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019486	Chromosome_7A	8264	5	131	32.804937076476286	0.5967530334199868	93.330763299922893	120	1	93.8288920056101	15	1	93.25139664804469	105	1	72.8544776119403	17	0.8235294117647058	methylated (>=50%)	P07825	Synaptophysin (Major synaptic vesicle protein p38)	endocytosis [GO:0006897]; modulation of chemical synaptic transmission [GO:0050804]; protein homooligomerization [GO:0051260]; regulation of long-term neuronal synaptic plasticity [GO:0048169]; regulation of neuronal synaptic plasticity [GO:0048168]; regulation of opioid receptor signaling pathway [GO:2000474]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; regulation of synaptic vesicle priming [GO:0010807]; response to amyloid-beta [GO:1904645]	hit with GO BP
GN019086	Chromosome_7A	6318	10	74	35.50174105729661	0.37409982140456666	67.21162579473206	74	0.7567567567567568	73.0625	32	0.90625	63.87303851640514	42	0.6428571428571429	67.42286751361162	12	0.8333333333333334	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019487	Chromosome_7A	7309	12	105	34.8748118757696	0.47294032821637877	89.85371926548397	105	0.9904761904761905	86.87810945273633	29	0.9655172413793104	90.84682440846825	76	1	45.61304836895388	29	0.41379310344827586	methylated (>=50%)	Q9JJJ7	Protein-serine O-palmitoleoyltransferase porcupine (mPORC) (EC 2.3.1.250)	glycoprotein metabolic process [GO:0009100]; lipid modification [GO:0030258]; protein lipidation [GO:0006497]; protein palmitoleylation [GO:0045234]; regulation of postsynaptic membrane neurotransmitter receptor levels [GO:0099072]; Wnt protein secretion [GO:0061355]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN019488	Chromosome_7A	8628	13	106	35.65136764024108	0.38706253441299315	90.55081458494958	106	0.9905660377358491	89.38253012048193	27	0.9629629629629629	90.85401602501466	79	1	48.940677966101696	15	0.4666666666666667	methylated (>=50%)	Q0VC03	Solute carrier family 61 member 1 (Major facilitator superfamily domain-containing protein 5) (Molybdate transporter 2 homolog) (Molybdate-anion transporter)	NA	hit, no GO BP
GN019489	Chromosome_7A	8389	18	115	35.08165454762189	0.45422807100145957	83.65608959402707	113	0.9557522123893806	86.67190878710439	74	0.972972972972973	79.25394548063127	39	0.9230769230769231	11.216158143532445	36	0.05555555555555555	methylated (>=50%)	E9Q9F7	Coiled-coil domain-containing protein 146	cell morphogenesis [GO:0000902]; cell population proliferation [GO:0008283]; cilium organization [GO:0044782]; flagellated sperm motility [GO:0030317]; gene expression [GO:0010467]; manchette assembly [GO:1905198]; nucleus organization [GO:0006997]; single fertilization [GO:0007338]; sperm axoneme assembly [GO:0007288]; sperm flagellum assembly [GO:0120316]; spermatid development [GO:0007286]; spermatogenesis [GO:0007283]	hit with GO BP
GN019490	Chromosome_7A	10750	10	185	34.902325581395345	0.5667286470466705	88.39394865525672	185	0.9351351351351351	70.47353760445682	28	0.75	91.24236252545825	157	0.9681528662420382	16.74347158218126	31	0.12903225806451613	methylated (>=50%)	Q9Y265	RuvB-like 1 (EC 3.6.4.12) (49 kDa TATA box-binding protein-interacting protein) (49 kDa TBP-interacting protein) (54 kDa erythrocyte cytosolic protein) (ECP-54) (INO80 complex subunit H) (Nuclear matrix protein 238) (NMP 238) (Pontin 52) (TIP49a) (TIP60-associated protein 54-alpha) (TAP54-alpha)	box C/D snoRNP assembly [GO:0000492]; chromatin remodeling [GO:0006338]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of telomere maintenance in response to DNA damage [GO:1904507]; protein stabilization [GO:0050821]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of chromosome organization [GO:0033044]; regulation of DNA replication [GO:0006275]; regulation of DNA strand elongation [GO:0060382]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair [GO:2000779]; regulation of embryonic development [GO:0045995]; regulation of transcription by RNA polymerase II [GO:0006357]; spermatogenesis [GO:0007283]; telomerase RNA localization to Cajal body [GO:0090671]; telomere maintenance [GO:0000723]	hit with GO BP
GN019491	Chromosome_7A	6649	13	81	33.25312077004061	0.4444269318748205	80.15556820337697	80	0.8875	79.68901846452867	35	0.8857142857142857	80.45440398381575	45	0.8888888888888888	1.8672890963654551	70	0	methylated (>=50%)	Q2KHX4	Protein transport protein Sec61 subunit alpha isoform 2 (Sec61 alpha-2)	post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	hit with GO BP
GN019081	Chromosome_7A	1023	2	43	46.04105571847507	0.8085618704507022	87.75100401606426	43	1	89.96509598603839	24	1	84.7517730496454	19	1	5.658324265505985	64	0.078125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019080	Chromosome_7A	690	3	18	33.768115942028984	0.965034965034965	0.39904229848363926	18	0	0.5910165484633569	13	0	0	5	0	0.516173434273916	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019492	Chromosome_7A	753	1	44	56.308100929614874	0.8332997987927565	1.2539184952978057	36	0	1.2539184952978057	36	0	NA	NA	NA	0.3972194637537239	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019493	Chromosome_7A	690	3	16	33.18840579710145	0.8897485493230174	0.45691906005221933	16	0	0.5862646566164154	13	0	0	3	0	0.6481128478841022	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019079	Chromosome_7A	2647	4	95	39.3275406120136	0.9287239071663884	0.6587976942080702	95	0	0.6666666666666666	81	0	0.6362672322375398	14	0	0.4606968039159228	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019074	Chromosome_7A	34246	18	885	35.51947672720902	0.8193370475814782	0.8276459203422635	836	0	0.4042037186742118	87	0	0.8718395815170009	749	0	0.6405124099279423	48	0	unmethylated (<10%)	Q9V4A7	Plexin-B	axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; motor neuron axon guidance [GO:0008045]; negative regulation of cell adhesion [GO:0007162]; olfactory bulb axon guidance [GO:0071678]; positive regulation of axonogenesis [GO:0050772]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; semaphorin-plexin signaling pathway [GO:0071526]; sensory neuron axon guidance [GO:0097374]; synapse assembly [GO:0007416]	hit with GO BP
GN019076	Chromosome_7A	15310	12	214	36.91704768125408	0.4116839253984507	78.70662460567823	212	0.8632075471698113	88.05528134254689	36	0.9722222222222222	75.31350770333214	176	0.8409090909090909	1.055045871559633	47	0	methylated (>=50%)	Q5SWD9	Pre-rRNA-processing protein TSR1 homolog	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000479]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]	hit with GO BP
GN019077	Chromosome_7A	5001	6	58	34.27314537092582	0.3952691653584511	74.95597041211694	56	0.8392857142857143	76.87687687687688	5	0.8	74.70071827613727	51	0.8431372549019608	62.120432321152855	61	0.6229508196721312	methylated (>=50%)	Q99714	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (17-beta-estradiol 17-dehydrogenase) (EC 1.1.1.62) (2-methyl-3-hydroxybutyryl-CoA dehydrogenase) (MHBD) (3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+))) (EC 1.1.1.239) (3-hydroxy-2-methylbutyryl-CoA dehydrogenase) (EC 1.1.1.178) (3-hydroxyacyl-CoA dehydrogenase type II) (3alpha(or 20beta)-hydroxysteroid dehydrogenase) (EC 1.1.1.53) (7-alpha-hydroxysteroid dehydrogenase) (EC 1.1.1.159) (Endoplasmic reticulum-associated amyloid beta-peptide-binding protein) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Short chain dehydrogenase/reductase family 5C member 1) (Short-chain type dehydrogenase/reductase XH98G2) (Type II HADH)	androgen metabolic process [GO:0008209]; bile acid biosynthetic process [GO:0006699]; brexanolone metabolic process [GO:0062173]; C21-steroid hormone metabolic process [GO:0008207]; estrogen metabolic process [GO:0008210]; fatty acid beta-oxidation [GO:0006635]; fatty acid metabolic process [GO:0006631]; L-isoleucine catabolic process [GO:0006550]; lipid metabolic process [GO:0006629]; mitochondrial tRNA 3'-end processing [GO:1990180]; mitochondrial tRNA 5'-end processing [GO:0097745]; mitochondrial tRNA methylation [GO:0070901]; mitochondrion organization [GO:0007005]; protein homotetramerization [GO:0051289]; tRNA 3'-end processing [GO:0042780]; tRNA 3'-terminal CCA addition [GO:0001680]	hit with GO BP
GN019494	Chromosome_7A	22904	7	425	36.90621725462801	0.5449656875736828	81.83815875708393	415	0.9012048192771084	79.39335580163697	79	0.8987341772151899	82.30433784714253	336	0.9017857142857143	11.510791366906474	42	0.047619047619047616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018576	Chromosome_7A	2538	1	26	39.00709219858156	0.2758130650493837	0	1	0	0	1	0	NA	NA	NA	4.980842911877395	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019495	Chromosome_7A	1206	3	30	36.650082918739635	0.7415150024594196	0.5747126436781609	11	0	0.8695652173913043	7	0	0	4	0	1.271186440677966	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020432	Chromosome_7A	5468	6	36	34.38185808339429	0.22300668403761187	31.607629427792915	30	0.23333333333333334	9.202453987730062	6	0	35.501066098081026	24	0.2916666666666667	0.6090133982947625	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020430	Chromosome_7A	2669	6	32	31.92206819033346	0.4729753677122098	9.04645476772616	28	0.10714285714285714	14.316239316239317	11	0	5.797101449275362	17	0.17647058823529413	76.98056801195814	51	0.9019607843137255	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019496	Chromosome_7A	1316	4	16	37.765957446808514	0.34460410461196034	44.005641748942175	16	0.375	50.99337748344371	4	0.5	42.11469534050179	12	0.3333333333333333	0.4484304932735426	54	0	sparse (10-50%)	Q8VC12	Urocanate hydratase (Urocanase) (EC 4.2.1.49) (Imidazolonepropionate hydrolase)	L-histidine catabolic process [GO:0006548]	hit with GO BP
GN019078	Chromosome_7A	9388	9	237	33.97954835960801	0.8746924265076752	0.8075930397135959	236	0	0.9291521486643438	18	0	0.7982062780269058	218	0	0.5202080832332934	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012443	Chromosome_7A	414	1	11	41.30434782608695	0.6277915632754343	0	11	0	0	11	0	NA	NA	NA	0.9146341463414634	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015833	Chromosome_7A	1077	1	14	37.697307335190345	0.3758225324027916	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019073	Chromosome_7A	7548	5	189	37.50662427133015	0.7124381985437329	1.0251630941286114	161	0	0.5050505050505051	20	0	1.108707409410492	141	0	0.8389261744966443	45	0	unmethylated (<10%)	O59028	Malate dehydrogenase (EC 1.1.1.37)	NA	hit, no GO BP
GN019497	Chromosome_7A	1032	2	29	43.604651162790695	0.5954162024510584	3.4482758620689653	18	0	8.860759493670885	7	0	1.6666666666666667	11	0	1.8867924528301887	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019498	Chromosome_7A	273	1	22	67.3992673992674	0.7099290780141844	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018557	Chromosome_7A	1114	1	22	37.61220825852783	0.5696885169688517	NA	0	NA	NA	NA	NA	NA	NA	NA	2.1046643913538112	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002614	Chromosome_7A	545	2	14	44.22018348623853	0.53319357092942	3.8461538461538463	1	0	3.8461538461538463	1	0	NA	NA	NA	0.546448087431694	36	0	NA	P31795	Pol polyprotein [Cleaved into: Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 3.1.26.4); Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; establishment of integrated proviral latency [GO:0075713]; symbiont entry into host cell [GO:0046718]; viral genome integration into host DNA [GO:0044826]	hit with GO BP
GN019071	Chromosome_7A	14803	22	227	35.42525163818145	0.49870718007047804	93.26726540724682	227	0.9823788546255506	92.76779622469866	69	0.9855072463768116	93.4542049710589	158	0.9810126582278481	81.0958904109589	44	0.9772727272727273	methylated (>=50%)	O93308	Structural maintenance of chromosomes protein 1A (SMC protein 1A) (SMC-1A) (xSMC1)	meiotic cell cycle [GO:0051321]; response to DNA damage checkpoint signaling [GO:0072423]; response to radiation [GO:0009314]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN019499	Chromosome_7A	7439	14	106	37.37061432988305	0.40825483115235767	79.2914935490925	98	0.9081632653061225	82.53662297609868	52	0.9423076923076923	75.0378979282466	46	0.8695652173913043	36.68016194331984	45	0.37777777777777777	methylated (>=50%)	Q4R6T7	IQ motif and ubiquitin-like domain-containing protein	cilium assembly [GO:0060271]; flagellated sperm motility [GO:0030317]; mating [GO:0007618]	hit with GO BP
GN019500	Chromosome_7A	47535	61	639	35.75049963185022	0.4233980636927333	73.56917897480452	635	0.8881889763779528	75.94698395963552	270	0.9148148148148149	72.22859083768522	365	0.8684931506849315	11.808328579577866	32	0.0625	methylated (>=50%)	Q8WXX0	Dynein axonemal heavy chain 7 (Axonemal beta dynein heavy chain 7) (Ciliary dynein heavy chain 7) (Dynein heavy chain-like protein 2) (hDHC2)	cilium movement [GO:0003341]; cilium movement involved in cell motility [GO:0060294]; cilium-dependent cell motility [GO:0060285]; inner dynein arm assembly [GO:0036159]	hit with GO BP
GN019501	Chromosome_7A	569	2	12	37.96133567662566	0.587203302373581	10.157068062827225	12	0	9.902067464635474	11	0	16.666666666666668	1	0	0.9283434870902234	81	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019069	Chromosome_7A	216	1	6	43.98148148148148	0.5822102425876011	0	6	0	0	6	0	NA	NA	NA	21.814671814671815	31	0.12903225806451613	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019929	Chromosome_7A	2366	1	33	37.91208791208791	0.3939711981915613	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019502	Chromosome_7A	505	2	5	36.039603960396036	0.3072897651210904	82.05128205128206	3	1	73.91304347826087	2	1	93.75	1	1	92.23034734917734	38	0.9736842105263158	NA	P0C218	Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.15) (EC 3.6.4.13) (DEAD box protein 20)	spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN019503	Chromosome_7A	6651	4	190	36.47571793715231	0.8617229549346083	0.8082292432035268	185	0	0.9641873278236914	24	0	0.7745010425975574	161	0	0.494641384995878	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019504	Chromosome_7A	2891	2	54	33.86371497751643	0.6545989735332596	0.5875872199779655	54	0	0.1402524544179523	19	0	0.746268656716418	35	0	0.6651017214397497	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019066	Chromosome_7A	18097	14	260	33.961430071282535	0.5000318815197707	85.74335495358005	260	0.9653846153846154	91.2906610703043	32	1	84.97829232995659	228	0.9605263157894737	0.5263157894736842	51	0	methylated (>=50%)	O43818	U3 small nucleolar RNA-interacting protein 2 (RRP9 homolog) (U3 small nucleolar ribonucleoprotein-associated 55 kDa protein) (U3 snoRNP-associated 55 kDa protein) (U3-55K)	maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]	hit with GO BP
GN019065	Chromosome_7A	1115	2	33	39.19282511210762	0.7707373271889401	0.9572431397574984	33	0	1.218026796589525	24	0	0.6702412868632708	9	0	0.5778120184899846	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019064	Chromosome_7A	1139	2	33	39.50834064969271	0.742693987235472	0.4861111111111111	33	0	0.6802721088435374	24	0	0.17921146953405018	9	0	0.4518595759471672	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019063	Chromosome_7A	9028	7	266	37.671688081524145	0.8320593177762764	0.6765067650676507	266	0	0.8844339622641509	103	0	0.5882352941176471	163	0	18.111559139784948	94	0.11702127659574468	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012996	Chromosome_7A	1496	4	37	39.43850267379679	0.6361640749807491	5.882352941176471	28	0	4.587155963302752	24	0	7.027027027027027	4	0	23.995200959808038	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019061	Chromosome_7A	41358	24	549	33.51467672518014	0.4736329481294083	76.74976669777364	522	0.8735632183908046	85.27459263729632	31	0.9354838709677419	76.25145518044238	491	0.869653767820774	0.7111813512445674	44	0	methylated (>=50%)	Q9UKG1	DCC-interacting protein 13-alpha (Dip13-alpha) (Adapter protein containing PH domain, PTB domain and leucine zipper motif 1)	adiponectin-activated signaling pathway [GO:0033211]; cellular response to hepatocyte growth factor stimulus [GO:0035729]; insulin receptor signaling pathway [GO:0008286]; maintenance of synapse structure [GO:0099558]; negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis [GO:1905450]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of macropinocytosis [GO:1905303]; positive regulation of melanin biosynthetic process [GO:0048023]; protein import into nucleus [GO:0006606]; regulation of D-glucose import across plasma membrane [GO:0046324]; regulation of fibroblast migration [GO:0010762]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of innate immune response [GO:0045088]; regulation of protein localization to plasma membrane [GO:1903076]; regulation of toll-like receptor 4 signaling pathway [GO:0034143]; signal transduction [GO:0007165]; signaling [GO:0023052]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN016878	Chromosome_7A	1160	2	6	28.017241379310345	0.26666666666666666	77.21943048576215	6	1	72.59786476868328	3	1	81.32911392405063	3	1	29.681069958847736	37	0.10810810810810811	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019060	Chromosome_7A	9847	8	151	35.757083375647404	0.48067469807852575	77.52922499639197	148	0.9054054054054054	70.54794520547945	25	0.84	78.53956715678176	123	0.9186991869918699	67.04119850187266	13	0.8461538461538461	methylated (>=50%)	Q54KD0	TPR repeat-containing protein DDB_G0287407	NA	hit, no GO BP
GN019505	Chromosome_7A	6923	5	107	34.84038711541239	0.511619442286109	82.6487845766974	103	0.9611650485436893	83.84146341463415	19	1	82.41317004617547	84	0.9523809523809523	80.9880239520958	18	0.9444444444444444	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019059	Chromosome_7A	2219	2	30	38.035150968904915	0.3740665194450532	48.4399375975039	30	0.5	71.08433734939759	7	0.5714285714285714	40.526315789473685	23	0.4782608695652174	3.7854889589905363	59	0	sparse (10-50%)	O75896	Tumor suppressor candidate 2 (Fusion 1 protein) (Fus-1 protein) (PDGFA-associated protein 2)	inflammatory response [GO:0006954]; regulation of mitochondrial membrane potential [GO:0051881]	hit with GO BP
GN019058	Chromosome_7A	14580	15	346	34.10836762688614	0.8162104335298834	0.6358157792889921	343	0	0.43035107587768967	87	0	0.7021650087770626	256	0	0.3534817956875221	44	0	unmethylated (<10%)	Q95JR6	Cyclic nucleotide-binding domain-containing protein 2	spermatogenesis [GO:0007283]	hit with GO BP
GN019057	Chromosome_7A	5007	8	138	37.50748951467945	0.7841683264388949	1.1378848728246318	135	0	1.0354745925215725	118	0	1.8396846254927726	17	0	0.4106776180698152	38	0	unmethylated (<10%)	A0A2B4RNI3	Cyclic GMP-AMP synthase-like receptor 2 (Sp-cGLR2) (EC 2.7.7.86)	NA	hit, no GO BP
GN003127	Chromosome_7A	795	1	29	44.905660377358494	0.7252280591380937	0.4672897196261682	21	0	0.4672897196261682	21	0	NA	NA	NA	0.9353078721745908	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019056	Chromosome_7A	2085	2	31	40.7673860911271	0.36103896103896105	89.71742543171115	31	0.967741935483871	89.71742543171115	31	0.967741935483871	NA	NA	NA	17.590618336886994	47	0.2553191489361702	methylated (>=50%)	Q17902	Egalitarian protein homolog	nuclear migration along microtubule [GO:0030473]; piRNA processing [GO:0034587]	hit with GO BP
GN019506	Chromosome_7A	5389	4	92	38.801261829652994	0.4535763688128051	93.70044052863436	92	0.9456521739130435	89.0909090909091	39	0.8974358974358975	95.27326440177252	53	0.9811320754716981	28.939393939393938	33	0.3939393939393939	methylated (>=50%)	P39944	Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5)	protein deubiquitination [GO:0016579]	hit with GO BP
GN019507	Chromosome_7A	2323	3	19	35.94489883770986	0.25321560933071724	60.560344827586206	14	0.7142857142857143	34.146341463414636	6	0.3333333333333333	81.46718146718146	8	1	0	14	0	methylated (>=50%)	Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (DNA helicase, RecQ-like type 3) (RecQ protein-like 2) (Werner syndrome protein) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	base-excision repair [GO:0006284]; cellular response to gamma radiation [GO:0071480]; cellular response to starvation [GO:0009267]; cellular senescence [GO:0090398]; DNA damage response [GO:0006974]; DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA recombination [GO:0006310]; DNA replication [GO:0006260]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair [GO:0006302]; mismatch repair [GO:0006298]; positive regulation of strand invasion [GO:0098530]; protein localization to nucleolus [GO:1902570]; replication fork processing [GO:0031297]; response to UV-C [GO:0010225]; t-circle formation [GO:0090656]; telomere maintenance [GO:0000723]; telomere maintenance via semi-conservative replication [GO:0032201]; telomeric D-loop disassembly [GO:0061820]	hit with GO BP
GN020002	Chromosome_7A	513	1	38	64.32748538011695	0.9585955940204564	NA	0	NA	NA	NA	NA	NA	NA	NA	0.47619047619047616	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019508	Chromosome_7A	14747	10	156	33.376279921339936	0.38063215660814065	79.58594126143475	136	0.8529411764705882	92.39057239057239	24	1	76.79906199618937	112	0.8214285714285714	0.32051282051282054	10	0	methylated (>=50%)	Q5RE03	Pre-mRNA-splicing factor 18 (PRP18 homolog)	generation of catalytic spliceosome for second transesterification step [GO:0000350]	hit with GO BP
GN019509	Chromosome_7A	561	1	52	54.188948306595364	1.3961234745154343	0.49554013875123887	29	0	0.49554013875123887	29	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002970	Chromosome_7A	3506	6	117	40.75869937250428	0.8078754672538276	7.269155206286837	34	0	8.294930875576037	28	0	1.3333333333333333	6	0	3.6144578313253013	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019510	Chromosome_7A	723	1	72	55.325034578146614	1.477226936065155	1.0869565217391304	13	0	1.0869565217391304	13	0	NA	NA	NA	0.5693950177935944	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019511	Chromosome_7A	1137	1	3	38.43447669305189	0.07547796070100903	89.16666666666667	3	1	89.16666666666667	3	1	NA	NA	NA	66.22188333968738	44	0.7954545454545454	NA	NA	NA	NA	no Swiss-Prot hit
GN019512	Chromosome_7A	37306	30	941	35.610893690023055	0.7957273872991695	0.64942568582588	870	0	0.7778540379775795	177	0	0.6169085063863063	693	0	1.1363636363636365	41	0	unmethylated (<10%)	Q9ULI1	NACHT and WD repeat domain-containing protein 2 (Leucine-rich repeat and WD repeat-containing protein KIAA1239)	NA	hit, no GO BP
GN019513	Chromosome_7A	24565	11	605	35.20048849989823	0.7953313148883365	0.586056995652874	592	0	0.7246376811594203	105	0	0.5663638703982935	487	0	0.717918037690697	65	0	unmethylated (<10%)	G5EF51	Lim and transglutaminase domain protein ltd-1 (Kyphoscoliosis inactive peptidase homolog ltd-1)	muscle structure development [GO:0061061]	hit with GO BP
GN019050	Chromosome_7A	29392	16	422	36.61200326619488	0.4312196378282153	65.95119746949842	398	0.8266331658291457	88.59247967479675	91	0.967032967032967	62.65621533683354	307	0.7850162866449512	82.82138794084186	12	0.9166666666666666	methylated (>=50%)	Q5ZKD7	RNA helicase MOV-10 (EC 5.6.2.5) (RNA 5'-3' helicase MOV-10)	3'-UTR-mediated mRNA destabilization [GO:0061158]; miRNA-mediated gene silencing by mRNA destabilization [GO:0035279]; miRNA-mediated post-transcriptional gene silencing [GO:0035195]; positive regulation of mRNA catabolic process [GO:0061014]; regulation of neuron projection arborization [GO:0150011]; transposable element silencing [GO:0010526]	hit with GO BP
GN019514	Chromosome_7A	27613	15	295	35.03784449353565	0.34986603372818115	80.5495621271735	276	0.8840579710144928	87.5	39	0.9743589743589743	79.48792977322604	237	0.869198312236287	46.6412213740458	25	0.48	methylated (>=50%)	O54781	SRSF protein kinase 2 (EC 2.7.11.1) (SFRS protein kinase 2) (Serine/arginine-rich protein-specific kinase 2) (SR-protein-specific kinase 2) [Cleaved into: SRSF protein kinase 2 N-terminal; SRSF protein kinase 2 C-terminal]	angiogenesis [GO:0001525]; intracellular signal transduction [GO:0035556]; negative regulation of viral genome replication [GO:0045071]; nuclear speck organization [GO:0035063]; peptidyl-serine phosphorylation [GO:0018105]; phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0043491]; positive regulation of cell cycle [GO:0045787]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of gene expression [GO:0010628]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of viral genome replication [GO:0045070]; protein phosphorylation [GO:0006468]; R-loop processing [GO:0062176]; regulation of mRNA processing [GO:0050684]; RNA splicing [GO:0008380]; spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN019051	Chromosome_7A	300	1	9	49.333333333333336	0.5141877737573796	96.30434782608695	9	1	96.30434782608695	9	1	NA	NA	NA	93.72848948374761	37	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019052	Chromosome_7A	30980	33	732	35.07746933505487	0.7681454849940147	0.663856981516679	720	0	0.48673884970696335	227	0	0.73181887482848	493	0	0.6239364719228587	52	0	unmethylated (<10%)	P46023	G protein-coupled receptor GRL101	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; hormone-mediated signaling pathway [GO:0009755]	hit with GO BP
GN019515	Chromosome_7A	19010	18	216	34.75013150973172	0.38028507117888594	73.13760460968582	216	0.8981481481481481	80.44563964656166	45	1	71.54906054279749	171	0.8713450292397661	77.75280898876404	7	0.8571428571428571	methylated (>=50%)	Q0VG85	Coiled-coil domain-containing protein 162	NA	hit, no GO BP
GN019516	Chromosome_7A	29954	29	437	36.188822861721306	0.44692528033939544	73.66749415887851	418	0.8779904306220095	81.54973357015986	98	0.9387755102040817	72.11639286962601	320	0.859375	NA	NA	NA	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016082	Chromosome_7A	361	1	11	40.443213296398895	0.7453078078078078	0.26455026455026454	11	0	0.26455026455026454	11	0	NA	NA	NA	0.9171597633136095	54	0	unmethylated (<10%)	P71359	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN019517	Chromosome_7A	1527	2	18	36.804191224623445	0.34820614168440256	1.3392857142857142	10	0	0	9	0	5.660377358490566	1	0	3.591160220994475	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019518	Chromosome_7A	568	2	21	41.725352112676056	0.85066324347454	0.5580357142857143	21	0	0.18115942028985507	13	0	1.1627906976744187	8	0	0.7917656373713381	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019519	Chromosome_7A	3404	9	90	36.07520564042303	0.8127122241086587	0.5899705014749262	89	0	0.55	41	0	0.6231823847112589	48	0	0.752162467092892	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019520	Chromosome_7A	5690	4	143	35.69420035149385	0.7907508765928333	2.028595869485519	142	0	2.4125452352231602	18	0	1.9853141147674735	124	0	0.7739438890680426	61	0	unmethylated (<10%)	A0QZA1	Universal stress protein MSMEG_3950/MSMEI_3859 (USP MSMEG_3950)	NA	hit, no GO BP
GN019045	Chromosome_7A	9283	4	262	33.88990628029732	0.9829712077856992	0.9268655706650429	262	0	0.7792207792207793	18	0	0.9349796588394833	244	0	0.6351836509251588	93	0	unmethylated (<10%)	A0QZA1	Universal stress protein MSMEG_3950/MSMEI_3859 (USP MSMEG_3950)	NA	hit, no GO BP
GN019046	Chromosome_7A	12004	8	120	36.34621792735755	0.3052161863232434	71.00544348382965	119	0.8487394957983193	69.32234432234432	24	0.875	71.36204889406287	95	0.8421052631578947	80.1948051948052	10	1	methylated (>=50%)	Q9D826	Peroxisomal sarcosine oxidase (PSO) (EC 1.5.3.1) (EC 1.5.3.7) (L-pipecolate oxidase) (L-pipecolic acid oxidase)	amino acid catabolic process [GO:0009063]; L-lysine catabolic process [GO:0019477]	hit with GO BP
GN019047	Chromosome_7A	2223	2	46	34.99775078722447	0.6763095238095238	0.7157894736842105	46	0	0.45662100456621	20	0	0.867244829886591	26	0	0.5233494363929146	67	0	unmethylated (<10%)	Q9ES30	Complement C1q tumor necrosis factor-related protein 3 (Collagenous repeat-containing sequence 26 kDa protein) (CORS26) (Secretory protein CORS26)	fat cell differentiation [GO:0045444]; glucose homeostasis [GO:0042593]; intracellular triglyceride homeostasis [GO:0035356]; maintenance of synapse structure [GO:0099558]; negative regulation of gene expression [GO:0010629]; negative regulation of gluconeogenesis [GO:0045721]; negative regulation of inflammatory response [GO:0050728]; negative regulation of interleukin-6 production [GO:0032715]; negative regulation of monocyte chemotactic protein-1 production [GO:0071638]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; positive regulation of adiponectin secretion [GO:0070165]; positive regulation of cytokine production [GO:0001819]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN019522	Chromosome_7A	7578	7	201	36.7247294800739	0.7889775672702184	0.9742452011189351	201	0	0.9607993850883936	51	0	0.978750804893754	150	0	3.7274453941120607	82	0	unmethylated (<10%)	O35814	Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing protein) (Hop)	cellular response to interleukin-7 [GO:0098761]	hit with GO BP
GN002867	Chromosome_7A	849	1	18	40.98939929328622	0.5064289501590669	0.6666666666666666	18	0	0.6666666666666666	18	0	NA	NA	NA	1.6149068322981366	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017580	Chromosome_7A	333	1	16	42.64264264264264	1.0705244122965643	4.0358744394618835	14	0	4.0358744394618835	14	0	NA	NA	NA	0.423728813559322	46	0	unmethylated (<10%)	P15043	ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ)	DNA damage response [GO:0006974]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; SOS response [GO:0009432]	hit with GO BP
GN019523	Chromosome_7A	1311	4	57	44.927536231884055	0.8623208474693623	NA	0	NA	NA	NA	NA	NA	NA	NA	12.442396313364055	5	0	NA	P16580	Glutamine synthetase (GS) (EC 6.3.1.2) (Glutamate decarboxylase) (EC 4.1.1.15) (Glutamate--ammonia ligase) (p42)	NA	hit, no GO BP
GN015881	Chromosome_7A	904	1	36	40.70796460176991	0.9660699973283462	17.781007751937985	27	0.07407407407407407	17.781007751937985	27	0.07407407407407407	NA	NA	NA	25.597060624617267	42	0.2619047619047619	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001638	Chromosome_7A	792	1	26	40.656565656565654	0.7951807228915663	21.884576098059245	20	0.2	21.884576098059245	20	0.2	NA	NA	NA	22.379760911871003	17	0.23529411764705882	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019180	Chromosome_7A	3379	7	38	34.566439775081385	0.379610166535106	3.55820649938297	19	0	6.788511749347259	4	0	3.2819825853985263	15	0	16.31339894019682	36	0.08333333333333333	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019524	Chromosome_7A	387	1	18	45.99483204134367	0.8795454545454545	0.547945205479452	18	0	0.547945205479452	18	0	NA	NA	NA	0.6566946369937979	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019048	Chromosome_7A	4013	6	106	36.13256915026165	0.8094051116557319	0.7735204173412484	106	0	0.9004237288135594	41	0	0.7082538817760828	65	0	3.567787971457696	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019049	Chromosome_7A	12476	11	315	34.99519076627124	0.8246839869735713	1.0753453923942458	277	0	0.7138221933809215	38	0	1.1199104071674266	239	0	0.32930845225027444	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019044	Chromosome_7A	7299	4	315	38.77243458007946	1.1512134084791386	0.6876111440426793	245	0	0.8501594048884166	32	0	0.6672004270082733	213	0	3.0310880829015545	69	0	unmethylated (<10%)	P53545	Homeobox protein goosecoid	animal organ development [GO:0048513]; regulation of transcription by RNA polymerase II [GO:0006357]; tissue development [GO:0009888]	hit with GO BP
GN019041	Chromosome_7A	9348	4	146	35.64398801882756	0.4917456182544358	86.86117647058823	146	0.9794520547945206	88.29268292682927	11	1	86.80372001957905	135	0.9777777777777777	92.91375291375292	27	0.9629629629629629	methylated (>=50%)	Q5D013	EEF1A lysine methyltransferase 2 (EC 2.1.1.-) (Methyltransferase-like protein 10) (Protein-lysine N-methyltransferase mettl10)	NA	hit, no GO BP
GN019042	Chromosome_7A	8707	4	132	33.6510853336396	0.5357814143252456	91.12296409181828	132	1	93.28621908127208	11	1	90.93264248704664	121	1	92.70194986072423	17	0.8823529411764706	methylated (>=50%)	Q3T0F5	Ras-related protein Rab-7a (EC 3.6.5.2)	early endosome to late endosome transport [GO:0045022]; endosome to lysosome transport [GO:0008333]; endosome to plasma membrane protein transport [GO:0099638]; lipophagy [GO:0061724]; phagosome acidification [GO:0090383]; phagosome-lysosome fusion [GO:0090385]	hit with GO BP
GN019527	Chromosome_7A	5628	11	49	34.43496801705757	0.29448316587663553	79.70107751129649	49	0.8775510204081632	87.0026525198939	15	0.9333333333333333	77.1078662270372	34	0.8529411764705882	48.30237027546445	32	0.65625	methylated (>=50%)	C4A0D9	Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12) (BRCA1-associated protein 1)	heterochromatin formation [GO:0031507]; negative regulation of DNA-templated transcription [GO:0045892]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; regulation of cell cycle [GO:0051726]; regulation of cell growth [GO:0001558]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN019528	Chromosome_7A	3595	3	31	35.2990264255911	0.2770554483801038	86.81771369721936	29	1	89.2	10	1	85.99167822468793	19	1	76.95390781563127	8	0.875	methylated (>=50%)	C4A0D9	Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12) (BRCA1-associated protein 1)	heterochromatin formation [GO:0031507]; negative regulation of DNA-templated transcription [GO:0045892]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; regulation of cell cycle [GO:0051726]; regulation of cell growth [GO:0001558]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN019529	Chromosome_7A	8773	7	140	34.09324062464379	0.5500958912330959	95.12734038841725	137	1	96.25292740046838	23	1	94.93030882754852	114	1	94.96688741721854	28	1	methylated (>=50%)	Q3T0B2	26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit RPN7)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	hit with GO BP
GN019039	Chromosome_7A	1135	3	23	35.77092511013216	0.6337241764377443	0.18248175182481752	23	0	0.23923444976076555	9	0	0.14749262536873156	14	0	0.5166931637519873	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019530	Chromosome_7A	1785	2	52	34.56582633053221	0.9791965566714491	0.8858603066439523	52	0	0.6334841628959276	22	0	1.0382513661202186	30	0	0.5022601707684581	45	0	unmethylated (<10%)	P02746	Complement C1q subcomponent subunit B	complement activation [GO:0006956]; complement activation, classical pathway [GO:0006958]; synapse pruning [GO:0098883]	hit with GO BP
GN019032	Chromosome_7A	180	1	4	47.77777777777778	0.5454545454545454	90.53030303030303	4	1	90.53030303030303	4	1	NA	NA	NA	86.35547576301616	14	1	NA	NA	NA	NA	no Swiss-Prot hit
GN019531	Chromosome_7A	453	1	14	54.083885209713024	0.5177142857142857	2.2151898734177213	14	0	2.2151898734177213	14	0	NA	NA	NA	0.684931506849315	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019532	Chromosome_7A	651	1	17	53.14900153609831	0.461125	0	9	0	0	9	0	NA	NA	NA	0.8450704225352113	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019533	Chromosome_7A	453	1	13	52.317880794701985	0.5124434389140271	1.3513513513513513	13	0	1.3513513513513513	13	0	NA	NA	NA	0.31645569620253167	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019534	Chromosome_7A	651	1	17	52.995391705069125	0.46297690763052207	0	8	0	0	8	0	NA	NA	NA	0.7874015748031497	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019535	Chromosome_7A	651	1	19	53.3026113671275	0.5068846815834768	0.6134969325153374	12	0	0.6134969325153374	12	0	NA	NA	NA	0.9421265141318977	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019536	Chromosome_7A	387	1	10	52.97157622739018	0.45874822190611664	0.8064516129032258	6	0	0.8064516129032258	6	0	NA	NA	NA	0.4878048780487805	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019537	Chromosome_7A	651	1	18	53.45622119815668	0.48129132952725184	0.41841004184100417	10	0	0.41841004184100417	10	0	NA	NA	NA	0.6905210295040803	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019033	Chromosome_7A	2445	2	61	37.259713701431494	0.7193812583203102	5.246523388116309	61	0	2.588996763754045	10	0	5.891594658287509	51	0	6.009615384615385	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019034	Chromosome_7A	5914	3	156	33.64896854920528	0.9370625535143502	0.8266631675633119	156	0	1.2820512820512822	27	0	0.768889546059441	129	0	0.6683375104427736	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019035	Chromosome_7A	2059	3	81	40.60223409422049	0.9549709979787337	0.7714065312419646	81	0	0.6949524506217996	66	0	0.9523809523809523	15	0	0.34705007436787305	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019036	Chromosome_7A	3340	4	104	38.77245508982036	0.8285389892282299	0.5271084337349398	104	0	0.5233318796336677	76	0	0.5322294500295683	28	0	1.174934725848564	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019037	Chromosome_7A	5358	7	161	37.04740574841359	0.8763974398049376	0.7078986587183308	161	0	0.8154943934760448	42	0	0.6732348111658456	119	0	0.32786885245901637	51	0	unmethylated (<10%)	Q9H2M3	S-methylmethionine--homocysteine S-methyltransferase BHMT2 (SMM-hcy methyltransferase) (EC 2.1.1.10) (Betaine--homocysteine S-methyltransferase 2)	L-methionine salvage [GO:0071267]; S-adenosylmethionine metabolic process [GO:0046500]; S-methylmethionine metabolic process [GO:0033477]	hit with GO BP
GN019031	Chromosome_7A	35387	31	938	35.39435385876169	0.8481898599818766	0.8571021397015411	933	0	0.7762623331398724	224	0	0.8886373284279043	709	0	1.949025487256372	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019540	Chromosome_7A	9150	3	259	38.04371584699454	0.8340377938057688	0.7300109214232339	241	0	1.2610340479192939	13	0	0.7046494820525174	228	0	0.6808278867102396	54	0	unmethylated (<10%)	Q57951	Universal stress protein MJ0531 (USP MJ0531)	NA	hit, no GO BP
GN019030	Chromosome_7A	492	1	19	49.390243902439025	0.638961038961039	94.54022988505747	17	1	94.54022988505747	17	1	NA	NA	NA	82.21288515406162	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019541	Chromosome_7A	9221	5	103	36.590391497668364	0.33387422737165223	88.78410239137757	102	0.9803921568627451	93.7354988399072	17	1	87.94326241134752	85	0.9764705882352941	21.830985915492956	41	0.17073170731707318	methylated (>=50%)	Q5XIA9	Kelch domain-containing protein 8B	mitotic cytokinetic process [GO:1902410]; mitotic nuclear division [GO:0140014]; nuclear chromosome segregation [GO:0098813]	hit with GO BP
GN019027	Chromosome_7A	21516	8	249	35.06227923405837	0.37878449794978525	85.38737007598917	220	0.8863636363636364	68.74506708760852	31	0.5483870967741935	87.45825967393439	189	0.9417989417989417	1.1789924973204715	48	0	methylated (>=50%)	C3YWU0	Alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	hit with GO BP
GN019025	Chromosome_7A	44047	9	1168	35.96612709151588	0.8199832327617809	0.875213466699195	1160	0	0.6590509666080844	63	0	0.882984772856511	1097	0	0.5632360471070148	38	0	unmethylated (<10%)	Q96QE2	Proton myo-inositol cotransporter (H(+)-myo-inositol cotransporter) (Hmit) (H(+)-myo-inositol symporter) (Solute carrier family 2 member 13)	myo-inositol transport [GO:0015798]; positive regulation of amyloid-beta formation [GO:1902004]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN019542	Chromosome_7A	273	1	0	48.35164835164835	0	NA	0	NA	NA	NA	NA	NA	NA	NA	62.121212121212125	8	0.625	NA	NA	NA	NA	no Swiss-Prot hit
GN016372	Chromosome_7A	378	1	11	53.439153439153436	0.4342105263157895	65.67656765676567	11	1	65.67656765676567	11	1	NA	NA	NA	91.71779141104294	53	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018732	Chromosome_7A	426	1	22	46.713615023474176	0.9701863354037267	NA	0	NA	NA	NA	NA	NA	NA	NA	63.15475004979088	55	0.8727272727272727	NA	NA	NA	NA	no Swiss-Prot hit
GN003845	Chromosome_7A	204	1	4	37.254901960784316	0.6538461538461539	86.80981595092024	4	0.75	86.80981595092024	4	0.75	NA	NA	NA	91.48424344479191	58	1	NA	NA	NA	NA	no Swiss-Prot hit
GN002613	Chromosome_7A	354	1	8	42.090395480225986	0.5113759479956663	27.419354838709676	3	0	27.419354838709676	3	0	NA	NA	NA	70.98344693281402	47	0.7446808510638298	NA	NA	NA	NA	no Swiss-Prot hit
GN011299	Chromosome_7A	676	2	9	40.680473372781066	0.3221433866356031	72.13930348258707	9	0.8888888888888888	76.71232876712328	6	0.8333333333333334	60	3	1	15	1	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019543	Chromosome_7A	229	2	7	41.92139737991266	0.6957465277777778	0	7	0	0	6	0	0	1	0	3.242034656232532	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019544	Chromosome_7A	15834	4	396	37.68472906403941	0.7046019470017809	86.84376478007252	380	0.9921052631578947	84.03292181069959	29	1	86.98513888313946	351	0.9914529914529915	82.5181598062954	35	0.9714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019024	Chromosome_7A	8682	3	129	37.15733701912002	0.43116805721096546	83.14435237679895	129	0.9457364341085271	90.11857707509881	26	1	81.76117062973609	103	0.9320388349514563	78.29557713052859	40	0.925	methylated (>=50%)	A1A5B6	TBC1 domain family member 25	regulation of autophagosome maturation [GO:1901096]	hit with GO BP
GN019023	Chromosome_7A	22167	5	185	34.23106419452339	0.2856490386072118	82.50942302116556	184	0.9021739130434783	85.86206896551724	15	1	82.36228813559322	169	0.893491124260355	67.94818219807773	31	0.7741935483870968	methylated (>=50%)	Q6DDT4	DNA-(apurinic or apyrimidinic site) endonuclease 2 (EC 3.1.11.2)	base-excision repair [GO:0006284]	hit with GO BP
GN019545	Chromosome_7A	37013	3	923	38.1271445167914	0.6864956398995385	2.164985042843381	838	0.011933174224343675	0.29723991507430997	40	0	2.283572834380308	798	0.012531328320802004	0.7426541814659348	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019022	Chromosome_7A	38443	8	525	36.022162682412926	0.4212115395066468	83.96261963976185	499	0.9378757515030061	81.09864146485529	25	0.92	84.08983575589022	474	0.9388185654008439	5.005656108597285	92	0	methylated (>=50%)	O95243	Methyl-CpG-binding domain protein 4 (EC 3.2.2.-) (Methyl-CpG-binding endonuclease 1) (Methyl-CpG-binding protein MBD4) (Mismatch-specific DNA N-glycosylase)	depyrimidination [GO:0045008]; DNA repair [GO:0006281]; response to estradiol [GO:0032355]	hit with GO BP
GN019546	Chromosome_7A	7939	14	220	38.55649326111601	0.7458681268186775	0.6966434452184928	220	0	0.4369197160021846	103	0	0.9213323883770376	117	0	0.43731778425655976	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019547	Chromosome_7A	36279	19	504	35.599106921359464	0.44162724544455007	86.28697721863311	474	0.9873417721518988	86.78854777509486	68	0.9705882352941176	86.2321300592207	406	0.9901477832512315	51.86440677966102	9	0.4444444444444444	methylated (>=50%)	Q07E01	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)	cell development [GO:0048468]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; liver development [GO:0001889]; neuron differentiation [GO:0030182]; pancreas development [GO:0031016]; positive chemotaxis [GO:0050918]; positive regulation of endothelial cell chemotaxis [GO:2001028]; regulation of gene expression [GO:0010468]; semaphorin-plexin signaling pathway [GO:0071526]	hit with GO BP
GN019548	Chromosome_7A	3090	3	34	36.34304207119741	0.33408592234553375	67.22939424031777	33	0.6060606060606061	43.676222596964585	18	0.3888888888888889	77.05840957072485	15	0.8666666666666667	1.1978917105893627	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019019	Chromosome_7A	30753	13	442	35.78512665431015	0.44958691255027367	85.08004432048294	430	0.9441860465116279	80.95238095238095	22	0.9090909090909091	85.25615488805673	408	0.946078431372549	50.34403669724771	34	0.5	methylated (>=50%)	Q9NRM2	Zinc finger protein 277 (Nuclear receptor-interacting factor 4)	NA	hit, no GO BP
GN019549	Chromosome_7A	3452	3	58	40.15063731170336	0.4169142895219612	91.76684881602914	58	1	94.03973509933775	30	1	89.98048145738451	28	1	90.75520833333333	13	0.9230769230769231	methylated (>=50%)	Q8VCK5	Kelch-like protein 20 (Kelch-like ECT2-interacting protein)	Golgi to endosome transport [GO:0006895]; negative regulation of apoptotic process [GO:0043066]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K33-linked ubiquitination [GO:1990390]; protein ubiquitination [GO:0016567]	hit with GO BP
GN019018	Chromosome_7A	177	1	5	44.067796610169495	0.6228008444757214	0	5	0	0	5	0	NA	NA	NA	1.3894402540690751	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019550	Chromosome_7A	18279	25	481	36.577493298320476	0.7867795921581542	0.9846012937203046	476	0	0.8124483613329662	225	0	1.1070833741549917	251	0	0.6466512702078522	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011534	Chromosome_7A	729	1	30	41.838134430727024	0.9412119125494922	90.29850746268657	19	1	90.29850746268657	19	1	NA	NA	NA	79.85878855444072	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019551	Chromosome_7A	19620	8	337	34.54638124362895	0.5762183835202138	71.43954918032787	337	0.884272997032641	66.85393258426966	26	0.7692307692307693	71.62604722010663	311	0.8938906752411575	66.48910411622276	35	0.5714285714285714	methylated (>=50%)	Q5ZKW0	Mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.14)	mitochondrial tRNA wobble position uridine thiolation [GO:1990799]	hit with GO BP
GN019552	Chromosome_7A	456	1	19	40.13157894736842	1.0514563106796118	0.8620689655172413	19	0	0.8620689655172413	19	0	NA	NA	NA	0.5530973451327433	61	0	unmethylated (<10%)	Q704V6	Toll-like receptor 6 (CD antigen CD286)	cellular response to diacyl bacterial lipopeptide [GO:0071726]; immune response [GO:0006955]; inflammatory response [GO:0006954]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN019553	Chromosome_7A	281	2	2	39.8576512455516	0.18205377389050859	0	2	0	0	2	0	NA	NA	NA	1.6861219195849546	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019554	Chromosome_7A	476	2	22	43.27731092436975	0.9894179894179894	0.5361930294906166	22	0	0.5747126436781609	21	0	0	1	0	1.0875955320399764	61	0	unmethylated (<10%)	P32297	Neuronal acetylcholine receptor subunit alpha-3	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; excitatory postsynaptic potential [GO:0060079]; locomotory behavior [GO:0007626]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; monoatomic ion transport [GO:0006811]; nervous system development [GO:0007399]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of acetylcholine secretion, neurotransmission [GO:0014056]; regulation of appetite [GO:0032098]; regulation of dendrite morphogenesis [GO:0048814]; regulation of membrane potential [GO:0042391]; regulation of smooth muscle contraction [GO:0006940]; response to acetylcholine [GO:1905144]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission involved in micturition [GO:0060084]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN019014	Chromosome_7A	1296	2	9	33.48765432098765	0.2925948223961469	83.83233532934132	9	1	89.70588235294117	6	1	76.85589519650655	3	1	75.64766839378238	5	1	methylated (>=50%)	Q99MV5	RNA helicase Mov10l1 (EC 5.6.2.5) (Cardiac helicase activated by MEF2 protein) (Cardiac-specific RNA helicase) (Moloney leukemia virus 10-like protein 1 homolog) (MOV10-like protein 1 homolog) (RNA 5'-3' helicase Mov10l1)	male meiosis I [GO:0007141]; male meiotic nuclear division [GO:0007140]; negative regulation of cell cycle [GO:0045786]; piRNA processing [GO:0034587]; spermatogenesis [GO:0007283]; transposable element silencing by piRNA-mediated DNA methylation [GO:0141196]	hit with GO BP
GN019013	Chromosome_7A	41199	25	302	35.763003956406706	0.22975250022837498	74.3491139635192	302	0.9072847682119205	72.28618421052632	51	0.9019607843137255	74.64755219796562	251	0.9083665338645418	83.63384188626907	19	1	methylated (>=50%)	F8WLE0	Kinesin-like protein KIF28 (Kinesin family member 28) (Kinesin-like protein 6)	mitochondrion organization [GO:0007005]; organelle transport along microtubule [GO:0072384]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN019556	Chromosome_7A	2418	4	55	37.38626964433416	0.6566110397946084	0.8064516129032258	55	0	0.9159034138218152	33	0	0.7036747458952306	22	0	0.968736239542052	34	0	unmethylated (<10%)	P30531	Sodium- and chloride-dependent GABA transporter 1 (GAT-1) (Solute carrier family 6 member 1)	amino acid transport [GO:0006865]; associative learning [GO:0008306]; chemical synaptic transmission [GO:0007268]; chloride transmembrane transport [GO:1902476]; gamma-aminobutyric acid import [GO:0051939]; gamma-aminobutyric acid reuptake [GO:0051936]; inorganic anion import across plasma membrane [GO:0098658]; memory [GO:0007613]; neurotransmitter transport [GO:0006836]; sodium ion import across plasma membrane [GO:0098719]; sodium ion transmembrane transport [GO:0035725]; synapse organization [GO:0050808]; transport across blood-brain barrier [GO:0150104]	hit with GO BP
GN019011	Chromosome_7A	28267	18	682	35.6705699225245	0.7584840182475934	0.8723283072034533	680	0	0.4985754985754986	134	0	0.9719427464975892	546	0	0.8184298272203698	63	0	unmethylated (<10%)	Q9D5U8	Cyclic nucleotide-binding domain-containing protein 2 (Cyclic nucleotide receptor involved in sperm function)	spermatogenesis [GO:0007283]	hit with GO BP
GN019010	Chromosome_7A	645	1	26	38.44961240310077	1.0924369747899159	2.1306818181818183	26	0	2.1306818181818183	26	0	NA	NA	NA	2.8065630397236614	65	0	unmethylated (<10%)	Q9N294	Beta-1,3-galactosyltransferase 5 (Beta-1,3-GalTase 5) (Beta3Gal-T5) (Beta3GalT5) (b3Gal-T5) (EC 2.4.1.-) (Beta-3-Gx-T5) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5)	protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN003952	Chromosome_7A	225	1	3	38.666666666666664	0.35676532769556024	12.053571428571429	3	0	12.053571428571429	3	0	NA	NA	NA	6.462781304096942	73	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019009	Chromosome_7A	21047	10	261	34.95034921841592	0.4072088550018503	91.99566160520607	259	0.9961389961389961	92.68857010643221	41	1	91.90367958719823	218	0.9954128440366973	24.407926534557756	37	0.16216216216216217	methylated (>=50%)	P97879	Glutamate receptor-interacting protein 1 (GRIP-1) (AMPA receptor-interacting protein GRIP1)	cellular response to brain-derived neurotrophic factor stimulus [GO:1990416]; cellular response to glycine [GO:1905430]; cellular response to phorbol 13-acetate 12-myristate [GO:1904628]; cerebral cortex development [GO:0021987]; dendrite arborization [GO:0140059]; intracellular protein localization [GO:0008104]; long-term synaptic depression [GO:0060292]; long-term synaptic potentiation [GO:0060291]; nervous system development [GO:0007399]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of mini excitatory postsynaptic potential [GO:0061885]; positive regulation of neuron projection arborization [GO:0150012]; positive regulation of protein localization to plasma membrane [GO:1903078]; receptor internalization [GO:0031623]; regulation of AMPA receptor activity [GO:2000311]; regulation of kainate selective glutamate receptor signaling pathway [GO:0106426]; regulation of synaptic scaling [GO:0150092]; response to phorbol 13-acetate 12-myristate [GO:1904627]	hit with GO BP
GN019008	Chromosome_7A	42397	17	401	38.39422600655707	0.25991838342392737	87.97796349035903	397	0.9496221662468514	85.95297029702971	59	0.8983050847457628	88.33782372023973	338	0.9585798816568047	2.392658144870534	41	0	methylated (>=50%)	P15056	Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)	animal organ morphogenesis [GO:0009887]; cellular response to calcium ion [GO:0071277]; epidermal growth factor receptor signaling pathway [GO:0007173]; establishment of protein localization to membrane [GO:0090150]; MAPK cascade [GO:0000165]; negative regulation of apoptotic process [GO:0043066]; positive regulation of D-glucose transmembrane transport [GO:0010828]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of gene expression [GO:0010628]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; postsynaptic modulation of chemical synaptic transmission [GO:0099170]; protein phosphorylation [GO:0006468]	hit with GO BP
GN019007	Chromosome_7A	1257	4	25	35.08353221957041	0.6565477185358516	0.2772002772002772	25	0	0	12	0	0.5208333333333334	13	0	0.6760270410816432	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019558	Chromosome_7A	408	1	19	40.931372549019606	1.1373239436619718	NA	0	NA	NA	NA	NA	NA	NA	NA	87.51926040061633	18	1	NA	NA	NA	NA	no Swiss-Prot hit
GN019006	Chromosome_7A	423	1	21	43.498817966903076	1.0526128688233203	NA	0	NA	NA	NA	NA	NA	NA	NA	60.526315789473685	2	1	NA	NA	NA	NA	no Swiss-Prot hit
GN019559	Chromosome_7A	423	1	21	43.498817966903076	1.0526128688233203	NA	0	NA	NA	NA	NA	NA	NA	NA	73.6842105263158	3	0.6666666666666666	NA	NA	NA	NA	no Swiss-Prot hit
GN019560	Chromosome_7A	417	1	3	42.44604316546763	0.17418546365914786	0	3	0	0	3	0	NA	NA	NA	5.233644859813084	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019561	Chromosome_7A	2302	4	58	36.707211120764555	0.7542254157628344	0.4006677796327212	58	0	0.4497751124437781	54	0	0	4	0	0.5417118093174431	57	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN019562	Chromosome_7A	279	1	12	50.89605734767025	0.6996865203761755	0.3663003663003663	12	0	0.3663003663003663	12	0	NA	NA	NA	1.2993149066855658	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019563	Chromosome_7A	270	1	5	39.25925925925926	0.4849137931034483	0.8968609865470852	5	0	0.8968609865470852	5	0	NA	NA	NA	0.597683974598431	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019001	Chromosome_7A	8221	9	132	36.18781170173945	0.49163893235667483	88.80404135338345	131	0.9618320610687023	77.01652089407192	39	0.8717948717948718	92.56275178184072	92	1	51.850828729281766	51	0.5490196078431373	methylated (>=50%)	Q58588	Uncharacterized protein MJ1187 (EC 3.2.2.-)	NA	hit, no GO BP
GN019566	Chromosome_7A	7772	8	143	36.48996397323726	0.5532195762981842	93.62432564982835	141	1	94.96124031007751	29	1	93.31113801452784	112	1	91.26493613514627	29	1	methylated (>=50%)	Q9BV10	Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (EC 2.4.1.260) (Asparagine-linked glycosylation protein 12 homolog) (hALG12) (Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,6-mannosyltransferase) (Mannosyltransferase ALG12 homolog) (Membrane protein SB87)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; protein folding [GO:0006457]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN019567	Chromosome_7A	2036	8	55	38.1139489194499	0.7438801607599561	0.5501481168006771	55	0	0.6900517538815412	42	0	0.16025641025641027	13	0	0.8254230293025175	64	0	unmethylated (<10%)	P33450	Cadherin-related tumor suppressor (Protein fat) [Cleaved into: Ft-mito]	axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell-cell adhesion [GO:0098609]; cell-cell adhesion mediated by cadherin [GO:0044331]; epithelial cell differentiation [GO:0030855]; equator specification [GO:0045317]; establishment of body hair planar orientation [GO:0048105]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; establishment of tissue polarity [GO:0007164]; establishment or maintenance of polarity of larval imaginal disc epithelium [GO:0016336]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; imaginal disc growth [GO:0007446]; imaginal disc pattern formation [GO:0007447]; imaginal disc-derived wing morphogenesis [GO:0007476]; microtubule cytoskeleton organization involved in establishment of planar polarity [GO:0090176]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of gene expression [GO:0010629]; negative regulation of growth [GO:0045926]; negative regulation of imaginal disc growth [GO:0045571]; negative regulation of organ growth [GO:0046621]; positive regulation of apoptotic process [GO:0043065]; positive regulation of hippo signaling [GO:0035332]; protein localization involved in establishment of planar polarity [GO:0090251]; pupal development [GO:0035209]; regulation of establishment of planar polarity [GO:0090175]; regulation of growth [GO:0040008]; regulation of imaginal disc growth [GO:0045570]; regulation of protein localization [GO:0032880]; regulation of tube length, open tracheal system [GO:0035159]; tissue development [GO:0009888]; wing disc development [GO:0035220]	hit with GO BP
GN017456	Chromosome_7A	1936	2	26	37.138429752066116	0.39062548502250505	0.36101083032490977	10	0	0	2	0	0.45454545454545453	8	0	0.45439792275235313	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017457	Chromosome_7A	1081	2	25	38.297872340425535	0.63403246996997	0.3333333333333333	15	0	0.3333333333333333	15	0	NA	NA	NA	0.5048805116122518	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018994	Chromosome_7A	852	1	40	45.070422535211264	0.9265149661528423	0.46604527296937415	40	0	0.46604527296937415	40	0	NA	NA	NA	0.6374963778614894	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018993	Chromosome_7A	815	2	28	37.17791411042945	0.9943355119825708	0.8058608058608059	28	0	0.9425878320479862	25	0	0	3	0	0.4910385465259023	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019569	Chromosome_7A	2075	2	50	36	0.753471415291657	0.5219985085756897	46	0	0.13458950201884254	20	0	0.6704486848891181	26	0	0.8726899383983573	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019570	Chromosome_7A	489	1	17	41.922290388548056	0.7967222541690627	0.78125	7	0	0.78125	7	0	NA	NA	NA	1.1137162954279016	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001297	Chromosome_7A	497	1	22	41.24748490945674	1.0984528832630098	0	2	0	0	2	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019571	Chromosome_7A	516	2	9	41.47286821705426	0.4235294117647059	86.94638694638695	9	1	85.82375478927203	5	1	88.69047619047619	4	1	94.1732283464567	31	1	methylated (>=50%)	Q6DDU9	RNA-binding protein 5-B (RNA-binding motif protein 5-B)	positive regulation of apoptotic process [GO:0043065]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN019572	Chromosome_7A	6120	11	72	36.1437908496732	0.36337637212432183	92.66157989228007	70	1	94.87179487179488	24	1	91.8746195982958	46	1	95.93852908891328	14	1	methylated (>=50%)	B2GV05	RNA-binding protein 5 (RNA-binding motif protein 5)	positive regulation of apoptotic process [GO:0043065]; regulation of alternative mRNA splicing, via spliceosome [GO:0000381]; spliceosomal complex assembly [GO:0000245]	hit with GO BP
GN019573	Chromosome_7A	1870	3	42	36.7379679144385	0.6764857881136951	96.54196793461176	42	1	97.56877799104286	20	1	95.55006180469715	22	1	30.83232077764277	67	0.373134328358209	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018990	Chromosome_7A	671	2	22	51.71385991058122	0.4948709353000335	9.23076923076923	11	0	9.23076923076923	11	0	NA	NA	NA	17.72869429241595	75	0.06666666666666667	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001126	Chromosome_7A	499	1	13	56.1122244488978	0.3401499659168371	11.052631578947368	8	0	11.052631578947368	8	0	NA	NA	NA	20.634920634920636	84	0.07142857142857142	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018989	Chromosome_7A	3596	4	113	38.43159065628476	0.8528534579196024	31.41918322641214	113	0.061946902654867256	33.15363881401617	19	0	31.191361302885465	94	0.07446808510638298	6.846673095467695	28	0	sparse (10-50%)	P80147	4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) ((S)-3-amino-2-methylpropionate transaminase) (EC 2.6.1.22) (GABA aminotransferase) (GABA-AT) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (GABA-T) (L-AIBAT)	GABA catabolic process [GO:0009450]; GABA shunt [GO:0006540]; nervous system process [GO:0050877]	hit with GO BP
GN018988	Chromosome_7A	1834	3	20	33.533260632497274	0.3962150017283097	80.5176132278936	20	0.9	88.94154818325434	10	0.9	73.48284960422164	10	0.9	72.47956403269755	5	0.8	methylated (>=50%)	Q6DBU5	Mannose-1-phosphate guanylyltransferase catalytic subunit beta (EC 2.7.7.13) (GDP-mannose pyrophosphorylase B) (GTP-mannose-1-phosphate guanylyltransferase beta)	GDP-mannose biosynthetic process [GO:0009298]; glycoprotein biosynthetic process [GO:0009101]; muscle cell development [GO:0055001]; neuron development [GO:0048666]; skeletal muscle tissue development [GO:0007519]	hit with GO BP
GN019575	Chromosome_7A	2649	5	65	36.655341638354095	0.7308361629881155	0.588550026752274	65	0	0.5500550055005501	20	0	0.6009190526687875	45	0	0.4257583821181479	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011482	Chromosome_7A	591	1	30	48.05414551607445	0.8828362296469651	0.36764705882352944	30	0	0.36764705882352944	30	0	NA	NA	NA	0.5246589716684156	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011509	Chromosome_7A	377	1	1	42.44031830238727	0.05984126984126984	0	1	0	0	1	0	NA	NA	NA	1.1569052783803326	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011486	Chromosome_7A	321	1	12	54.517133956386296	0.5676392572944297	3.1645569620253164	12	0	3.1645569620253164	12	0	NA	NA	NA	0.7456503728251864	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012611	Chromosome_7A	307	1	6	55.04885993485342	0.2647312446105203	6.666666666666667	1	0	6.666666666666667	1	0	NA	NA	NA	1.9014693171996542	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019576	Chromosome_7A	756	1	36	46.560846560846564	0.8938811705586758	7.18232044198895	12	0	7.18232044198895	12	0	NA	NA	NA	52.5089605734767	22	0.5454545454545454	unmethylated (<10%)	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN020716	Chromosome_7A	1283	2	11	38.737334372564305	0.2347784136278946	58.8235294117647	1	1	58.8235294117647	1	1	NA	NA	NA	68.12865497076024	11	0.8181818181818182	NA	NA	NA	NA	no Swiss-Prot hit
GN019577	Chromosome_7A	3458	5	125	38.05668016194332	0.9990985576923077	0.586281024037522	125	0	0.6723558313938454	110	0	0.32	15	0	0.19011406844106463	18	0	unmethylated (<10%)	Q9R0M0	Cadherin EGF LAG seven-pass G-type receptor 2 (Flamingo homolog)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebrospinal fluid secretion [GO:0033326]; cilium assembly [GO:0060271]; cilium movement [GO:0003341]; dendrite morphogenesis [GO:0048813]; homophilic cell-cell adhesion [GO:0007156]; neural plate anterior/posterior regionalization [GO:0021999]; neuron migration [GO:0001764]; regulation of cell-cell adhesion [GO:0022407]; regulation of DNA-templated transcription [GO:0006355]; regulation of protein localization [GO:0032880]; ventricular system development [GO:0021591]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN019578	Chromosome_7A	2343	3	62	39.820742637644045	0.6705719429441905	0.5248091603053435	61	0	0.5148005148005148	27	0	0.530705079605762	34	0	0.6668783740870118	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019579	Chromosome_7A	8056	9	113	37.78550148957299	0.3974814866564203	83.86767408617521	111	0.963963963963964	93.7719298245614	27	1	80.86239020495076	84	0.9523809523809523	87.89473684210526	21	1	methylated (>=50%)	O89049	Thioredoxin reductase 1, cytoplasmic (TR) (EC 1.8.1.9) (NADPH-dependent thioredoxin reductase) (Peroxidase TXNRD1) (EC 1.11.1.2) (Thioredoxin reductase TR1)	benzene-containing compound metabolic process [GO:0042537]; cell population proliferation [GO:0008283]; cell redox homeostasis [GO:0045454]; cellular response to copper ion [GO:0071280]; cellular response to hyperoxia [GO:0071455]; gastrulation [GO:0007369]; halogen metabolic process [GO:0070276]; hydrogen peroxide catabolic process [GO:0042744]; mesoderm formation [GO:0001707]; positive regulation of apoptotic process [GO:0043065]; response to axon injury [GO:0048678]; response to hyperoxia [GO:0055093]; response to oxidative stress [GO:0006979]; response to selenium ion [GO:0010269]; response to xenobiotic stimulus [GO:0009410]	hit with GO BP
GN019580	Chromosome_7A	2612	5	32	34.80091883614089	0.44221062990043064	86.51162790697674	32	1	82.82208588957056	6	1	87.17105263157895	26	1	88.19628647214854	22	1	methylated (>=50%)	Q16881	Thioredoxin reductase 1, cytoplasmic (TR) (EC 1.8.1.9) (Gene associated with retinoic and interferon-induced mortality 12 protein) (GRIM-12) (Gene associated with retinoic and IFN-induced mortality 12 protein) (KM-102-derived reductase-like factor) (Peroxidase TXNRD1) (EC 1.11.1.2) (Thioredoxin reductase TR1)	cell redox homeostasis [GO:0045454]; selenium compound metabolic process [GO:0001887]; signal transduction [GO:0007165]	hit with GO BP
GN017547	Chromosome_7A	168	1	3	42.26190476190476	0.4064516129032258	0	3	0	0	3	0	NA	NA	NA	1.155015197568389	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018983	Chromosome_7A	16756	4	440	36.76891859632371	0.7784338071949252	1.7182770663562281	401	0	1.0121457489878543	26	0	1.752330746326939	375	0	0.9252912954078135	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018984	Chromosome_7A	8081	4	241	34.141814131914366	1.0260641184373436	0.8783260139498837	241	0	0.5676442762535477	27	0	0.9094353921940129	214	0	0.8508914100486223	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018985	Chromosome_7A	11719	11	187	35.258981141735646	0.5140428300805128	87.35094692541502	185	0.9675675675675676	89.51990632318501	29	0.9655172413793104	87.01789085678324	156	0.967948717948718	88.59315589353612	16	1	methylated (>=50%)	Q8MPM1	Gelsolin-like protein 2 (Actin-modulator) (EWAM-P2)	actin polymerization or depolymerization [GO:0008154]	hit with GO BP
GN019582	Chromosome_7A	923	2	10	35.2112676056338	0.3527478407093174	80	4	0.75	80	4	0.75	NA	NA	NA	80.27777777777777	36	0.9722222222222222	NA	NA	NA	NA	no Swiss-Prot hit
GN019583	Chromosome_7A	189	1	9	50.79365079365079	0.7386018237082067	0	9	0	0	9	0	NA	NA	NA	2.156177156177156	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019584	Chromosome_7A	1452	1	57	41.735537190082646	0.9081671842252532	1.1051985264019648	57	0	1.1051985264019648	57	0	NA	NA	NA	1.218026796589525	71	0	unmethylated (<10%)	P42700	RNA-binding protein RO60 (60 kDa SS-A/Ro ribonucleoprotein) (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (TROVE domain family member 2)	NA	hit, no GO BP
GN019585	Chromosome_7A	1878	1	50	38.92438764643237	0.717133299729643	91.5127840909091	50	1	91.5127840909091	50	1	NA	NA	NA	90.71170084439083	22	0.9545454545454546	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019586	Chromosome_7A	8735	11	111	35.03148254149971	0.414462556088603	87.29289940828403	109	0.9357798165137615	88.96982310093652	30	1	86.62670525010334	79	0.9113924050632911	21.340388007054674	31	0.1935483870967742	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019587	Chromosome_7A	13007	33	235	38.27169985392481	0.4948083604967242	86.68307587845867	215	0.9534883720930233	89.38162108893816	83	0.9759036144578314	85.26479347403858	132	0.9393939393939394	84.65526179367548	46	0.9565217391304348	methylated (>=50%)	Q6ZUG5	Uncharacterized protein FLJ43738	NA	hit, no GO BP
GN019588	Chromosome_7A	1600	3	24	38.25	0.4108401895856292	86.08815426997245	24	1	91.75475687103594	20	1	75.49407114624506	4	1	84.51548451548452	18	1	methylated (>=50%)	Q58CN9	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D (N-acyl phosphatidylethanolamine phospholipase D) (NAPE-PLD) (NAPE-hydrolyzing phospholipase D) (EC 3.1.4.54)	host-mediated modulation of intestinal microbiota composition [GO:0048874]; N-acylethanolamine metabolic process [GO:0070291]; N-acylphosphatidylethanolamine metabolic process [GO:0070292]; positive regulation of brown fat cell differentiation [GO:0090336]; positive regulation of inflammatory response [GO:0050729]; temperature homeostasis [GO:0001659]	hit with GO BP
GN019589	Chromosome_7A	672	1	14	37.351190476190474	0.5974091948183896	0.64	14	0	0.64	14	0	NA	NA	NA	0.8311461067366579	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019590	Chromosome_7A	2046	3	70	40.02932551319648	0.8542287963736133	0.6211180124223602	70	0	0.7199424046076314	44	0	0.4624277456647399	26	0	0.4018215912135012	63	0	unmethylated (<10%)	Q16829	Dual specificity protein phosphatase 7 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase PYST2)	ERK1 and ERK2 cascade [GO:0070371]; MAPK cascade [GO:0000165]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; negative regulation of MAP kinase activity [GO:0043407]; peptidyl-tyrosine dephosphorylation [GO:0035335]	hit with GO BP
GN019591	Chromosome_7A	5106	2	121	38.60164512338425	0.6420438957475995	2.026646650403453	121	0	2.1415823914336705	115	0	0	6	0	1.840168243953733	50	0	unmethylated (<10%)	Q69Z37	Sterile alpha motif domain-containing protein 9-like (SAM domain-containing protein 9-like)	common myeloid progenitor cell proliferation [GO:0035726]; endosomal vesicle fusion [GO:0034058]; hematopoietic progenitor cell differentiation [GO:0002244]; regulation of protein catabolic process [GO:0042176]; spleen development [GO:0048536]; stem cell division [GO:0017145]	hit with GO BP
GN003676	Chromosome_7A	690	1	18	43.04347826086956	0.5789669960842811	0.3656307129798903	18	0	0.3656307129798903	18	0	NA	NA	NA	0.29296875	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019592	Chromosome_7A	1008	2	17	38.19444444444444	0.47777839736798083	0.7396449704142012	17	0	0.7886435331230284	16	0	0	1	0	0.49586776859504134	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019593	Chromosome_7A	498	1	14	45.58232931726908	0.5417249417249417	2.1321961620469083	14	0	2.1321961620469083	14	0	NA	NA	NA	4.80715483510341	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019594	Chromosome_7A	693	1	19	40.98124098124098	0.6538060479666319	0.7716049382716049	19	0	0.7716049382716049	19	0	NA	NA	NA	0.7927070947284979	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019595	Chromosome_7A	465	1	8	47.526881720430104	0.3116099849220975	85.02202643171806	8	1	85.02202643171806	8	1	NA	NA	NA	92.58241758241758	10	1	methylated (>=50%)	Q7ZY86	Transmembrane protein 168	NA	hit, no GO BP
GN019596	Chromosome_7A	730	2	7	43.97260273972603	0.19860085503303537	88.73873873873873	7	1	88.59060402684564	5	1	89.04109589041096	2	1	93.70491803278688	29	1	methylated (>=50%)	Q91VX9	Transmembrane protein 168	regulation of ubiquitin-dependent protein catabolic process [GO:2000058]; regulation of voltage-gated sodium channel activity [GO:1905150]	hit with GO BP
GN018971	Chromosome_7A	3762	4	123	37.63955342902711	0.9244628247774881	0.8146191105239983	123	0	0.6939090208172706	41	0	0.8628659476117103	82	0	0.7132132132132132	43	0	unmethylated (<10%)	Q63416	Inter-alpha-trypsin inhibitor heavy chain H3 (ITI heavy chain H3) (ITI-HC3) (Inter-alpha-inhibitor heavy chain 3)	hyaluronan metabolic process [GO:0030212]	hit with GO BP
GN018972	Chromosome_7A	2894	6	75	37.24948168624741	0.7471986505327297	0.6006790284669626	75	0	0.5982512655315232	51	0	0.6038647342995169	24	0	0.6303580433686334	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018976	Chromosome_7A	593	1	5	44.01349072512647	0.1888775640208944	0	4	0	0	4	0	NA	NA	NA	0.35046728971962615	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018973	Chromosome_7A	519	1	6	44.89402697495183	0.24297752808988765	0	3	0	0	3	0	NA	NA	NA	0.1631321370309951	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018974	Chromosome_7A	1920	1	21	44.791666666666664	0.23454951600893523	0.3952569169960474	17	0	0.3952569169960474	17	0	NA	NA	NA	0	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019599	Chromosome_7A	1092	1	9	44.32234432234432	0.18086457240655882	1.2987012987012987	9	0	1.2987012987012987	9	0	NA	NA	NA	0.6622516556291391	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019600	Chromosome_7A	771	1	1	43.7094682230869	0.03019976498237368	0	1	0	0	1	0	NA	NA	NA	1.4814814814814814	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019601	Chromosome_7A	243	1	12	48.559670781893004	0.8379310344827586	0.6472491909385113	12	0	0.6472491909385113	12	0	NA	NA	NA	1.0347682119205297	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019602	Chromosome_7A	294	1	5	47.61904761904762	0.30908326324642554	61.53846153846154	5	0.8	61.53846153846154	5	0.8	NA	NA	NA	52.120535714285715	27	0.6666666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019603	Chromosome_7A	870	1	22	45.51724137931034	0.4932481187506443	94.00206825232678	22	1	94.00206825232678	22	1	NA	NA	NA	82.1103374397429	31	0.9032258064516129	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019604	Chromosome_7A	936	1	36	43.58974358974359	0.8112676056338028	1.0516252390057361	36	0	1.0516252390057361	36	0	NA	NA	NA	1.080182800166182	52	0	unmethylated (<10%)	Q9H8W5	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99)	negative regulation of inflammatory response [GO:0050728]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]	hit with GO BP
GN018977	Chromosome_7A	978	1	48	41.8200408997955	1.1225787938208427	0.674432863274065	48	0	0.674432863274065	48	0	NA	NA	NA	1.5050907481186366	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019605	Chromosome_7A	1026	1	32	40.838206627680314	0.7499314755596163	0.08143322475570032	32	0	0.08143322475570032	32	0	NA	NA	NA	3.1115524660708376	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019606	Chromosome_7A	1101	1	27	38.51044504995458	0.6639195979899497	1.0570824524312896	26	0	1.0570824524312896	26	0	NA	NA	NA	1.3089005235602094	50	0	unmethylated (<10%)	Q9ESN6	Tripartite motif-containing protein 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRIM2) (Neural activity-related RING finger protein) (RING-type E3 ubiquitin transferase TRIM2)	cellular response to leukemia inhibitory factor [GO:1990830]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of neuron apoptotic process [GO:0043523]	hit with GO BP
GN019607	Chromosome_7A	425	2	8	35.529411764705884	0.5985915492957746	0.8836524300441826	8	0	1.1261261261261262	6	0	0.425531914893617	2	0	0.6540977298961139	54	0	unmethylated (<10%)	B3EWZ5	MAM and LDL-receptor class A domain-containing protein 1 (Skeletal organic matrix MAM and LDL-receptor 1) (SOM MAM and LDL-receptor 1)	NA	hit, no GO BP
GN019608	Chromosome_7A	347	2	5	40.05763688760807	0.35921325051759834	0.7662835249042146	5	0	0.4784688995215311	4	0	1.9230769230769231	1	0	1.0079798404031919	63	0	unmethylated (<10%)	B3EWZ6	MAM and LDL-receptor class A domain-containing protein 2 (Skeletal organic matrix MAM and LDL-receptor 2) (SOM MAM and LDL-receptor 2)	NA	hit, no GO BP
GN019609	Chromosome_7A	1398	1	45	39.12732474964235	0.841020293575038	0.6265060240963856	45	0	0.6265060240963856	45	0	NA	NA	NA	0.4004004004004004	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018969	Chromosome_7A	12626	8	136	33.65277997782354	0.38477944718945023	74.11744446357844	136	0.8308823529411765	75.52182163187855	23	0.8260869565217391	73.89614272899432	113	0.831858407079646	0.8674101610904585	48	0	methylated (>=50%)	Q28IV3	RNA polymerase II-associated protein 3	NA	hit, no GO BP
GN019610	Chromosome_7A	3323	5	74	33.37345771892868	0.8011977140474003	1.243455497382199	74	0	1.146384479717813	22	0	1.2753623188405796	52	0	1.054481546572935	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019611	Chromosome_7A	792	1	28	44.57070707070707	0.7125506072874493	9.067357512953368	18	0	9.067357512953368	18	0	NA	NA	NA	9.523809523809524	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002930	Chromosome_7A	477	1	7	44.44444444444444	0.297196261682243	69.56521739130434	7	0.8571428571428571	69.56521739130434	7	0.8571428571428571	NA	NA	NA	70.83333333333333	2	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019612	Chromosome_7A	354	1	8	42.090395480225986	0.5113759479956663	77.77777777777777	3	1	77.77777777777777	3	1	NA	NA	NA	82.55287009063444	32	0.96875	NA	NA	NA	NA	no Swiss-Prot hit
GN019613	Chromosome_7A	406	2	10	36.206896551724135	0.7617260787992496	1.4814814814814814	10	0	1.650943396226415	8	0	0.8620689655172413	2	0	1.0748560460652592	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019614	Chromosome_7A	288	1	3	43.40277777777778	0.23376623376623376	0	3	0	0	3	0	NA	NA	NA	0.7631347226298797	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002995	Chromosome_7A	789	1	10	41.191381495564	0.31964025279533304	0.29985007496251875	10	0	0.29985007496251875	10	0	NA	NA	NA	0.9766306243460062	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019615	Chromosome_7A	645	1	24	50.23255813953488	0.5916752665978672	0.8733624454148472	24	0	0.8733624454148472	24	0	NA	NA	NA	3.100381194409149	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019616	Chromosome_7A	408	1	11	43.38235294117647	0.5888218315402781	0.2564102564102564	11	0	0.2564102564102564	11	0	NA	NA	NA	0.7487131492746841	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018964	Chromosome_7A	1661	4	47	51.65562913907285	0.4320804529630224	0.2070393374741201	20	0	0.2304147465437788	19	0	0	1	0	1.5302491103202847	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018965	Chromosome_7A	210	1	19	55.23809523809524	1.209090909090909	1.4285714285714286	7	0	1.4285714285714286	7	0	NA	NA	NA	2.4630541871921183	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018966	Chromosome_7A	2207	4	23	35.47802446760308	0.3318449851601009	95.94594594594595	23	1	94.39775910364146	6	1	96.40768588137009	17	1	86.13883344422267	39	0.9743589743589743	methylated (>=50%)	O01666	ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)	proton motive force-driven ATP synthesis [GO:0015986]	hit with GO BP
GN019617	Chromosome_7A	903	1	9	43.30011074197121	0.21988636363636363	86.0576923076923	9	1	86.0576923076923	9	1	NA	NA	NA	96.04578563995838	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018967	Chromosome_7A	3040	3	51	37.598684210526315	0.4785776021731078	90.57187017001546	51	1	88.49765258215963	7	1	90.88643645425418	44	1	92.51517194875252	30	1	methylated (>=50%)	Q5RBS9	ATP synthase F(1) complex subunit gamma, mitochondrial (ATP synthase F1 subunit gamma) (F-ATPase gamma subunit)	NA	hit, no GO BP
GN018968	Chromosome_7A	4901	11	60	35.60497857580086	0.38935451837140017	90.02609452015076	60	1	94.125	32	1	86.4791779340184	28	1	45.11180447217889	41	0.5365853658536586	methylated (>=50%)	Q08C76	Protein SSUH2 homolog (Protein ssu-2 homolog)	odontogenesis [GO:0042476]	hit with GO BP
GN019619	Chromosome_7A	4875	5	155	37.51794871794872	0.9059665201533713	0.7063074901445466	144	0	0.2997601918465228	46	0	0.8597285067873304	98	0	0.8728179551122195	52	0	unmethylated (<10%)	A2BIR6	Carbohydrate deacetylase (EC 3.5.1.-)	carbohydrate metabolic process [GO:0005975]	hit with GO BP
GN019620	Chromosome_7A	633	2	14	34.59715639810427	0.7394859813084113	0.6191950464396285	14	0	0.5145797598627787	10	0	0.7772020725388601	4	0	0.7057785619761799	84	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019621	Chromosome_7A	213	1	17	44.13145539906103	1.825100806451613	NA	0	NA	NA	NA	NA	NA	NA	NA	1.36986301369863	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019622	Chromosome_7A	2919	3	92	40.184994861253855	0.7852234782252735	0.768	91	0	0.7681228996639462	51	0	0.7677543186180422	40	0	0.8727907484180668	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019623	Chromosome_7A	189	1	6	56.08465608465608	0.4186046511627907	12.359550561797754	6	0	12.359550561797754	6	0	NA	NA	NA	4.215997689864279	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019624	Chromosome_7A	7194	10	86	34.87628579371699	0.3947073271874701	75.87073608617594	85	0.8235294117647058	80.67967275015734	25	0.88	73.9512685254961	60	0.8	1.443298969072165	21	0	methylated (>=50%)	Q2M389	WASH complex subunit 4 (Strumpellin and WASH-interacting protein) (SWIP) (WASH complex subunit SWIP)	endosomal transport [GO:0016197]; endosome organization [GO:0007032]; nuclear envelope budding [GO:0140591]; regulation of Arp2/3 complex-mediated actin nucleation [GO:0034315]	hit with GO BP
GN019625	Chromosome_7A	1101	1	33	39.32788374205268	0.7756500576405789	NA	0	NA	NA	NA	NA	NA	NA	NA	0	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018962	Chromosome_7A	10963	4	200	31.515096232782998	0.7946776963262738	0.5874865367668658	199	0	0.5943536404160475	16	0	0.5870020964360587	183	0	0.49303944315545245	52	0	unmethylated (<10%)	P55918	Microfibril-associated glycoprotein 4 (36 kDa microfibril-associated glycoprotein) (36 kDa MAP)	elastic fiber assembly [GO:0048251]	hit with GO BP
GN018963	Chromosome_7A	349	2	4	34.383954154727796	0.39048951048951047	0.7246376811594203	4	0	0.7246376811594203	4	0	NA	NA	NA	0.4440059200789344	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN017706	Chromosome_7A	2628	8	60	38.203957382039576	0.6268012386559232	0.389321468298109	59	0	0.22522522522522523	46	0	0.8583690987124464	13	0	0.8433734939759037	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019626	Chromosome_7A	22450	21	347	34.57906458797327	0.5170674780642163	79.47876715493739	346	0.8728323699421965	81.73466630640367	63	0.8888888888888888	79.0133779264214	283	0.8692579505300353	46.670162558993184	36	0.3888888888888889	methylated (>=50%)	Q9UP83	Conserved oligomeric Golgi complex subunit 5 (COG complex subunit 5) (13S Golgi transport complex 90 kDa subunit) (GTC-90) (Component of oligomeric Golgi complex 5) (Golgi transport complex 1)	Golgi organization [GO:0007030]; inter-Golgi cisterna vesicle-mediated transport [GO:0048219]; intra-Golgi vesicle-mediated transport [GO:0006891]; retrograde transport, vesicle recycling within Golgi [GO:0000301]	hit with GO BP
GN019627	Chromosome_7A	4328	6	50	35.5822550831793	0.3690697702182526	85.91428571428571	49	1	76.91082802547771	11	1	87.88300835654596	38	1	49.11602209944751	34	0.4117647058823529	methylated (>=50%)	O95620	tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like (EC 1.3.1.90) (pp35) (tRNA-dihydrouridine synthase 4-like)	tRNA dihydrouridine synthesis [GO:0002943]	hit with GO BP
GN019628	Chromosome_7A	15594	17	177	36.6358855970245	0.33935385829734027	87.39946380697052	175	0.96	88.29211746522411	102	0.9705882352941176	86.67606074839517	73	0.9452054794520548	0.6181925228142479	70	0	methylated (>=50%)	Q9BYP7	Serine/threonine-protein kinase WNK3 (EC 2.7.11.1) (Protein kinase lysine-deficient 3) (Protein kinase with no lysine 3)	cell volume homeostasis [GO:0006884]; cellular hyperosmotic response [GO:0071474]; DNA damage response [GO:0006974]; intracellular signal transduction [GO:0035556]; maintenance of blood-brain barrier [GO:0035633]; membraneless organelle assembly [GO:0140694]; monoatomic ion homeostasis [GO:0050801]; negative regulation of apoptotic process [GO:0043066]; negative regulation of pancreatic juice secretion [GO:0090188]; negative regulation of protein localization to plasma membrane [GO:1903077]; osmosensory signaling pathway [GO:0007231]; positive regulation of calcium ion transport [GO:0051928]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of peptidyl-threonine phosphorylation [GO:0010800]; positive regulation of protein localization to plasma membrane [GO:1903078]; positive regulation of sodium ion transmembrane transporter activity [GO:2000651]; positive regulation of sodium ion transport [GO:0010765]; protein localization to plasma membrane [GO:0072659]; protein phosphorylation [GO:0006468]; regulation of calcium ion import [GO:0090279]; regulation of monoatomic cation transmembrane transport [GO:1904062]; renal sodium ion absorption [GO:0070294]	hit with GO BP
GN019629	Chromosome_7A	6108	1	156	46.02161100196464	0.4878694165113564	0.4032258064516129	13	0	0.4032258064516129	13	0	NA	NA	NA	0.6154960173787111	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019630	Chromosome_7A	2489	3	42	37.203696263559664	0.4907887323943662	79.46078431372548	42	0.7857142857142857	81.81818181818181	9	0.7777777777777778	79.02382335851249	33	0.7878787878787878	0.721370604147881	56	0	methylated (>=50%)	Q6DIH3	DNA replication licensing factor mcm2 (EC 3.6.4.12) (Minichromosome maintenance protein 2)	cell cycle DNA replication [GO:0044786]; double-strand break repair via break-induced replication [GO:0000727]; mitotic DNA replication initiation [GO:1902975]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN018954	Chromosome_7A	15018	9	489	37.49500599280863	0.9284188009876093	2.169316644113667	472	0	1.9034897311738186	142	0	2.259471091228269	330	0	0.5181347150259067	20	0	unmethylated (<10%)	O34507	Serine/threonine-protein kinase PrkC (Ser/Thr-protein kinase PrkC) (EC 2.7.11.1)	cellular response to peptidoglycan [GO:0071224]; signal transduction [GO:0007165]; spore germination [GO:0009847]	hit with GO BP
GN019631	Chromosome_7A	4751	7	153	38.22353188802357	0.8837425595238095	0.5656565656565656	153	0	0.497086047308879	124	0	0.8170961659333752	29	0	0.42706964520367935	49	0	unmethylated (<10%)	B2IZD3	Bacterial dynamin-like protein (BDLP) (EC 3.6.5.5)	mitochondrial fusion [GO:0008053]	hit with GO BP
GN019632	Chromosome_7A	1224	1	31	42.23856209150327	0.5725667722951562	95.58472553699283	31	1	95.58472553699283	31	1	NA	NA	NA	12.3059866962306	61	0.11475409836065574	methylated (>=50%)	Q9HCJ2	Leucine-rich repeat-containing protein 4C (Netrin-G1 ligand) (NGL-1)	modulation of chemical synaptic transmission [GO:0050804]; regulation of axonogenesis [GO:0050770]; synaptic membrane adhesion [GO:0099560]	hit with GO BP
GN019633	Chromosome_7A	762	1	30	41.732283464566926	0.9103217585218223	8.245877061469265	30	0	8.245877061469265	30	0	NA	NA	NA	2.2506790842064417	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019634	Chromosome_7A	9733	12	129	35.16901263741909	0.43105997143563407	81.72845450168512	129	0.8837209302325582	95.66929133858268	28	1	79.2128445581131	101	0.8514851485148515	0.45839210155148097	44	0	methylated (>=50%)	P20695	Interferon-related developmental regulator 1 (IRPR) (Nerve growth factor-inducible protein PC4)	adipose tissue development [GO:0060612]; fat cell differentiation [GO:0045444]; glial cell proliferation [GO:0014009]; muscle cell differentiation [GO:0042692]; negative regulation of axon extension [GO:0030517]; negative regulation of collateral sprouting [GO:0048671]; neuroblast proliferation [GO:0007405]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of transcription by RNA polymerase II [GO:0006357]; skeletal muscle tissue regeneration [GO:0043403]; striated muscle tissue development [GO:0014706]; Wnt signaling pathway [GO:0016055]	hit with GO BP
GN019635	Chromosome_7A	1569	1	36	39.06947100063735	0.6061425536024725	0.5363528009535161	36	0	0.5363528009535161	36	0	NA	NA	NA	1.6697588126159555	25	0	unmethylated (<10%)	M9PH32	Protein meiotic P26	protein ubiquitination [GO:0016567]	hit with GO BP
GN019636	Chromosome_7A	1062	1	28	38.888888888888886	0.7090128755364807	0.7864488808227466	28	0	0.7864488808227466	28	0	NA	NA	NA	0.5690440060698028	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019637	Chromosome_7A	21470	19	562	35.70097810898929	0.8218381088979392	0.6130397967823878	561	0	0.45454545454545453	162	0	0.6606474344857961	399	0	0.5253104106972302	47	0	unmethylated (<10%)	Q2QLA9	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)	cell development [GO:0048468]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; liver development [GO:0001889]; neuron differentiation [GO:0030182]; pancreas development [GO:0031016]; positive chemotaxis [GO:0050918]; positive regulation of endothelial cell chemotaxis [GO:2001028]; regulation of gene expression [GO:0010468]; semaphorin-plexin signaling pathway [GO:0071526]	hit with GO BP
GN019638	Chromosome_7A	378	1	13	46.82539682539682	0.6332474226804123	0.5194805194805194	13	0	0.5194805194805194	13	0	NA	NA	NA	0.5388760585065435	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019639	Chromosome_7A	1029	1	44	51.992225461613216	0.6329121002012973	1.113861386138614	34	0	1.113861386138614	34	0	NA	NA	NA	2.2628372497824194	29	0	unmethylated (<10%)	Q80UN1	BTB/POZ domain-containing protein KCTD9	cell maturation [GO:0048469]; gene expression [GO:0010467]; intracellular signal transduction [GO:0035556]; natural killer cell degranulation [GO:0043320]; natural killer cell differentiation [GO:0001779]; natural killer cell proliferation [GO:0001787]; NK T cell lineage commitment [GO:0002364]; protein homooligomerization [GO:0051260]; protein ubiquitination [GO:0016567]; response to tumor cell [GO:0002347]; response to virus [GO:0009615]	hit with GO BP
GN019640	Chromosome_7A	997	2	26	37.81344032096289	0.729950439288128	0.5438477226376615	26	0	0.602928509905254	22	0	0.3225806451612903	4	0	1.262272089761571	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019641	Chromosome_7A	21203	16	569	34.75923218412489	0.8886302315593222	0.6422272070798636	569	0	0.6478209658421673	89	0	0.6411891143575358	480	0	0.586756077116513	51	0	unmethylated (<10%)	Q2QLE0	Hepatocyte growth factor receptor (HGF receptor) (EC 2.7.10.1) (HGF/SF receptor) (Proto-oncogene c-Met) (Scatter factor receptor) (SF receptor) (Tyrosine-protein kinase Met)	branching morphogenesis of an epithelial tube [GO:0048754]; cell surface receptor protein tyrosine kinase signaling pathway [GO:0007169]; endothelial cell morphogenesis [GO:0001886]; liver development [GO:0001889]; negative regulation of hydrogen peroxide-mediated programmed cell death [GO:1901299]; neuron differentiation [GO:0030182]; pancreas development [GO:0031016]; positive chemotaxis [GO:0050918]; positive regulation of endothelial cell chemotaxis [GO:2001028]; positive regulation of transcription by RNA polymerase II [GO:0045944]; semaphorin-plexin signaling pathway [GO:0071526]	hit with GO BP
GN019642	Chromosome_7A	3788	7	29	32.655755015839496	0.2877740811568386	11.833333333333334	12	0	18.181818181818183	5	0	9.846827133479213	7	0	16.201117318435752	17	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019643	Chromosome_7A	2163	1	21	38.881183541377716	0.26431771894093686	NA	0	NA	NA	NA	NA	NA	NA	NA	2.591792656587473	10	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019644	Chromosome_7A	4496	5	156	38.23398576512456	0.9504667121995641	0.7677843936070198	153	0	1.7462165308498254	26	0	0.6156074597139236	127	0	0.8316604531115572	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019645	Chromosome_7A	255	1	15	52.15686274509804	0.8673469387755102	0.5025125628140703	15	0	0.5025125628140703	15	0	NA	NA	NA	0.3431185665268776	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018947	Chromosome_7A	8919	5	201	38.21056172216616	0.6233246177061674	56.98293061405453	200	0.55	44.484167517875385	128	0.3515625	80.30495552731894	72	0.9027777777777778	75.52973342447027	39	0.8717948717948718	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019646	Chromosome_7A	8699	17	232	37.59052764685596	0.7549743543318191	1.3822593476531424	219	0	1.4122893954410307	102	0	1.3621262458471761	117	0	0.7092198581560284	60	0	unmethylated (<10%)	A7Y2X0	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (xGlyT2) (Solute carrier family 6 member 5)	glycine import across plasma membrane [GO:1903804]; sodium ion transmembrane transport [GO:0035725]; synaptic transmission, glycinergic [GO:0060012]	hit with GO BP
GN019647	Chromosome_7A	12738	15	348	36.48924477940022	0.827830089578395	4.048348852003933	345	0.014492753623188406	1.529497450837582	100	0	4.836015791071971	245	0.02040816326530612	1.1984021304926764	66	0	unmethylated (<10%)	Q761V0	Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (Solute carrier family 6 member 5)	glycine import across plasma membrane [GO:1903804]; glycine transport [GO:0015816]; neurotransmitter reuptake [GO:0098810]; neurotransmitter uptake [GO:0001504]; sodium ion transmembrane transport [GO:0035725]; synaptic transmission, glycinergic [GO:0060012]	hit with GO BP
GN018946	Chromosome_7A	4509	7	68	36.970503437569306	0.4418613364845585	62.37885462555066	68	0.7647058823529411	60.92964824120603	17	0.8235294117647058	62.82100421617478	51	0.7450980392156863	76.90036900369003	37	0.8378378378378378	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019648	Chromosome_7A	2060	2	58	41.359223300970875	0.6589019036904683	61.86868686868687	58	0.603448275862069	80.95238095238095	36	0.8888888888888888	40.32258064516129	22	0.13636363636363635	51.40845070422535	12	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019649	Chromosome_7A	4056	3	45	41.88856015779093	0.2579394240879131	18.343949044585987	34	0.23529411764705882	12.195121951219512	7	0	19.061166429587484	27	0.2962962962962963	49.37655860349127	24	0.4583333333333333	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019650	Chromosome_7A	4990	2	170	37.635270541082164	0.962100084267401	2.0147508544702286	107	0	0.49586776859504134	26	0	2.4373419176822257	81	0	28.732849071832124	30	0	unmethylated (<10%)	Q9XWB9	BTB and MATH domain-containing protein 36	NA	hit, no GO BP
GN011519	Chromosome_7A	2042	3	30	36.92458374142997	0.43189509306260576	19.586120401337794	28	0	18.4811237928007	20	0	20.590582601755788	8	0	18.304278922345482	13	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011520	Chromosome_7A	710	1	16	38.87323943661972	0.6080393941015897	8.52059925093633	16	0	8.52059925093633	16	0	NA	NA	NA	7.88276907529055	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019651	Chromosome_7A	1230	1	52	40.8130081300813	1.0160121997712543	0.46928327645051193	52	0	0.46928327645051193	52	0	NA	NA	NA	0.4830140074062148	61	0	unmethylated (<10%)	P09484	Neuronal acetylcholine receptor subunit beta-2 (Neuronal acetylcholine receptor non-alpha-1 chain) (N-alpha 1)	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; memory [GO:0007613]; monoatomic ion transmembrane transport [GO:0034220]; response to hypoxia [GO:0001666]; synaptic transmission, cholinergic [GO:0007271]; visual learning [GO:0008542]	hit with GO BP
GN019652	Chromosome_7A	477	1	22	42.138364779874216	1.046469884323893	0.2109704641350211	22	0	0.2109704641350211	22	0	NA	NA	NA	0.5913978494623656	48	0	unmethylated (<10%)	O70212	5-hydroxytryptamine receptor 3A (5-HT3-A) (5-HT3A) (5-hydroxytryptamine receptor 3) (5-HT-3) (5-HT3R) (Serotonin receptor 3A) (Serotonin-gated ion channel receptor)	monoatomic cation transport [GO:0006812]	hit with GO BP
GN019653	Chromosome_7A	189	1	5	46.03174603174603	0.5108108108108108	0	5	0	0	5	0	NA	NA	NA	2.0273248126928163	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019654	Chromosome_7A	243	1	15	44.03292181069959	1.2870762711864407	0.3460207612456747	15	0	0.3460207612456747	15	0	NA	NA	NA	0.7272727272727273	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018940	Chromosome_7A	3559	4	121	38.46586119696544	0.9209362502940485	0.3436784003332639	121	0	0.3493958363662833	89	0	0.32930845225027444	32	0	0.46202180742931065	39	0	unmethylated (<10%)	Q9V5N8	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)	axon guidance [GO:0007411]; axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion mediated by cadherin [GO:0044331]; dendrite development [GO:0016358]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; morphogenesis of a polarized epithelium [GO:0001738]; mushroom body development [GO:0016319]; ommatidial rotation [GO:0016318]; positive regulation of axon extension [GO:0045773]; positive regulation of axon guidance [GO:1902669]; R3/R4 development [GO:0048057]; regulation of axonogenesis [GO:0050770]; regulation of synapse assembly [GO:0051963]; regulation of tube length, open tracheal system [GO:0035159]; segment polarity determination [GO:0007367]	hit with GO BP
GN019655	Chromosome_7A	735	3	29	37.95918367346939	1.0970149253731343	0.6506180871828237	29	0	0.7407407407407407	20	0	0.5067567567567568	9	0	0.5238926813779965	54	0	unmethylated (<10%)	Q14517	Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]	anatomical structure morphogenesis [GO:0009653]; cell adhesion [GO:0007155]; cell migration [GO:0016477]; cell-cell adhesion mediated by cadherin [GO:0044331]; cell-cell signaling [GO:0007267]; cellular response to angiotensin [GO:1904385]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]	hit with GO BP
GN019656	Chromosome_7A	384	1	14	41.666666666666664	0.8533333333333334	0.5809731299927379	14	0	0.5809731299927379	14	0	NA	NA	NA	0.6280014776505356	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018941	Chromosome_7A	8722	4	271	36.11556982343499	0.9530188082819662	0.807950807950808	269	0	0.704225352112676	40	0	0.8237232289950577	229	0	0.9381663113006397	70	0	unmethylated (<10%)	Q9I928	Fucolectin-4	regulation of cellular defense response [GO:0010185]; regulation of complement activation, lectin pathway [GO:0001868]; regulation of innate immune response [GO:0045088]	hit with GO BP
GN019657	Chromosome_7A	2555	4	70	36.986301369863014	0.8053911900065747	0.5064715813168261	70	0	0.5686988171064604	62	0	0.21390374331550802	8	0	0.41057644933486614	62	0	unmethylated (<10%)	Q2PZL6	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)	axonogenesis [GO:0007409]; branching involved in ureteric bud morphogenesis [GO:0001658]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebral cortex development [GO:0021987]; condensed mesenchymal cell proliferation [GO:0072137]; digestive tract development [GO:0048565]; epithelial cell differentiation [GO:0030855]; establishment of planar polarity [GO:0001736]; fibroblast growth factor receptor signaling pathway [GO:0008543]; heart morphogenesis [GO:0003007]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; inner ear receptor cell stereocilium organization [GO:0060122]; kidney development [GO:0001822]; nephron development [GO:0072006]; neurogenesis [GO:0022008]; Notch signaling pathway [GO:0007219]; ossification involved in bone maturation [GO:0043931]; plasma membrane organization [GO:0007009]; regulation of metanephric nephron tubule epithelial cell differentiation [GO:0072307]	hit with GO BP
GN019658	Chromosome_7A	2191	3	63	37.65403925148334	0.8116437147930803	0.634478489631693	63	0	0.6414825374198146	31	0	0.6291028446389497	32	0	0.5559968228752978	54	0	unmethylated (<10%)	Q9V5N8	Protocadherin-like wing polarity protein stan (Protein flamingo) (Protein starry night)	axon guidance [GO:0007411]; axonogenesis [GO:0007409]; calcium-dependent cell-cell adhesion [GO:0016339]; cell surface receptor signaling pathway [GO:0007166]; cell-cell adhesion mediated by cadherin [GO:0044331]; dendrite development [GO:0016358]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; establishment of imaginal disc-derived wing hair orientation [GO:0001737]; establishment of ommatidial planar polarity [GO:0042067]; establishment of planar polarity [GO:0001736]; homophilic cell-cell adhesion [GO:0007156]; morphogenesis of a polarized epithelium [GO:0001738]; mushroom body development [GO:0016319]; ommatidial rotation [GO:0016318]; positive regulation of axon extension [GO:0045773]; positive regulation of axon guidance [GO:1902669]; R3/R4 development [GO:0048057]; regulation of axonogenesis [GO:0050770]; regulation of synapse assembly [GO:0051963]; regulation of tube length, open tracheal system [GO:0035159]; segment polarity determination [GO:0007367]	hit with GO BP
GN019659	Chromosome_7A	3293	3	102	36.258730640753114	0.943012600229095	0.588754783632617	102	0	0.661072972285787	30	0	0.5433045701502077	72	0	0.596342433077127	53	0	unmethylated (<10%)	Q14517	Protocadherin Fat 1 (Cadherin family member 7) (Cadherin-related tumor suppressor homolog) (Protein fat homolog) [Cleaved into: Protocadherin Fat 1, nuclear form]	anatomical structure morphogenesis [GO:0009653]; cell adhesion [GO:0007155]; cell migration [GO:0016477]; cell-cell adhesion mediated by cadherin [GO:0044331]; cell-cell signaling [GO:0007267]; cellular response to angiotensin [GO:1904385]; homophilic cell-cell adhesion [GO:0007156]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]	hit with GO BP
GN019660	Chromosome_7A	699	1	14	43.91988555078684	0.4160714285714286	0.8746355685131195	14	0	0.8746355685131195	14	0	NA	NA	NA	1.8315018315018314	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019661	Chromosome_7A	615	1	16	42.113821138211385	0.589292130794107	0.2304147465437788	16	0	0.2304147465437788	16	0	NA	NA	NA	3.530895334174023	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018942	Chromosome_7A	339	1	11	51.91740412979351	0.540199913081269	0.6024096385542169	11	0	0.6024096385542169	11	0	NA	NA	NA	2.1921641791044775	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019662	Chromosome_7A	737	2	26	48.575305291723204	0.5987189501640369	0.6329113924050633	13	0	0.7352941176470589	11	0	0	2	0	0.8869179600886918	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019663	Chromosome_7A	1868	4	14	36.29550321199144	0.22763633198415806	83.93881453154876	14	1	83.09859154929578	8	1	85.71428571428571	6	1	76.2338648443432	23	0.5217391304347826	methylated (>=50%)	Q3MHH4	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)	brain development [GO:0007420]; glutaminyl-tRNA aminoacylation [GO:0006425]; negative regulation of apoptotic signaling pathway [GO:2001234]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of stress-activated MAPK cascade [GO:0032873]	hit with GO BP
GN019664	Chromosome_7A	3711	5	48	34.54594448935597	0.4336546888694128	88.82418191902384	48	0.9583333333333334	92.46861924686192	10	1	88.26726342710998	38	0.9473684210526315	91.30170316301704	36	0.9722222222222222	methylated (>=50%)	Q3MHH4	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)	brain development [GO:0007420]; glutaminyl-tRNA aminoacylation [GO:0006425]; negative regulation of apoptotic signaling pathway [GO:2001234]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of stress-activated MAPK cascade [GO:0032873]	hit with GO BP
GN019665	Chromosome_7A	3643	6	36	37.27696953060664	0.28693072426226063	57.365269461077844	36	0.6666666666666666	35.677530017152655	14	0.5	68.99724011039558	22	0.7727272727272727	0.47961630695443647	44	0	methylated (>=50%)	P47897	Glutamine--tRNA ligase (EC 6.1.1.18) (Glutaminyl-tRNA synthetase) (GlnRS)	brain development [GO:0007420]; glutaminyl-tRNA aminoacylation [GO:0006425]; negative regulation of apoptotic signaling pathway [GO:2001234]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of stress-activated MAPK cascade [GO:0032873]; tRNA aminoacylation for protein translation [GO:0006418]	hit with GO BP
GN019666	Chromosome_7A	563	2	7	36.9449378330373	0.3732007575757576	0	6	0	0	6	0	NA	NA	NA	4.088050314465409	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019667	Chromosome_7A	10418	10	181	36.26415818775197	0.5304791044473802	79.24510272336359	180	0.7944444444444444	56.78802313712147	66	0.5151515151515151	88.01488174328993	114	0.956140350877193	4.07488986784141	52	0	methylated (>=50%)	Q3U2S4	OTU domain-containing protein 5 (EC 3.4.19.12) (Deubiquitinating enzyme A) (DUBA)	CD8-positive, alpha-beta T cell differentiation [GO:0043374]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of interleukin-17 production [GO:0032700]; neural crest cell differentiation [GO:0014033]; positive regulation of TORC1 signaling [GO:1904263]; positive regulation of TORC2 signaling [GO:1904515]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108]; protein K63-linked deubiquitination [GO:0070536]; regulation of immune response [GO:0050776]; regulation of protein stability [GO:0031647]; regulation of T-helper 17 type immune response [GO:2000316]; response to lipopolysaccharide [GO:0032496]; T-helper 17 cell lineage commitment [GO:0072540]	hit with GO BP
GN019668	Chromosome_7A	630	1	22	49.36507936507937	0.5749128919860628	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN017541	Chromosome_7A	902	1	39	39.467849223946786	1.1171875	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019669	Chromosome_7A	4166	4	111	35.93374939990399	0.8255513780434247	NA	0	NA	NA	NA	NA	NA	NA	NA	2.6651216685979144	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019670	Chromosome_7A	1828	6	16	34.13566739606127	0.30345600365209635	0.6666666666666666	16	0	0.9259259259259259	11	0	0	5	0	2.5179856115107913	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019671	Chromosome_7A	537	1	15	38.361266294227185	0.7680205949656751	0.6993006993006993	15	0	0.6993006993006993	15	0	NA	NA	NA	0.5374280230326296	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018936	Chromosome_7A	1323	2	29	35.374149659863946	0.7013179300637944	0.3091190108191654	23	0	0.5847953216374269	13	0	0	10	0	0.5748019263632127	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019672	Chromosome_7A	3399	1	102	38.62900853192115	0.8071942446043165	0.5673758865248227	95	0	0.5673758865248227	95	0	NA	NA	NA	0.546448087431694	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019673	Chromosome_7A	415	3	14	41.204819277108435	0.7961085228829816	0.5	14	0	0.6072874493927125	11	0	0	3	0	0.18231540565177756	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019674	Chromosome_7A	2067	3	65	36.09095307208515	0.9747665653363128	0.4550625711035267	65	0	0	4	0	0.4805766920304365	61	0	0.6624605678233438	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017542	Chromosome_7A	629	1	22	49.2845786963434	0.5779318409622453	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018935	Chromosome_7A	5100	1	177	38.86274509803921	0.9314972370844663	0.577825929938606	94	0	0.577825929938606	94	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019675	Chromosome_7A	198	1	8	48.484848484848484	0.6984126984126984	0.45248868778280543	8	0	0.45248868778280543	8	0	NA	NA	NA	0.5827263267429761	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018920	Chromosome_7A	2562	1	88	38.83684621389539	0.9158400155987229	0.8547008547008547	88	0	0.8547008547008547	88	0	NA	NA	NA	1.5239477503628447	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018921	Chromosome_7A	180	1	4	42.22222222222222	0.5282465150403521	0.5102040816326531	4	0	0.5102040816326531	4	0	NA	NA	NA	0.6369426751592356	59	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019676	Chromosome_7A	16793	13	178	34.877627582921455	0.3488998374063452	69.82817284790745	175	0.8342857142857143	79.30582842174198	24	0.875	68.4133346368169	151	0.8278145695364238	82.70975056689342	30	0.9666666666666667	methylated (>=50%)	Q61124	Battenin (Protein CLN3)	actin cytoskeleton organization [GO:0030036]; action potential [GO:0001508]; amino acid transport [GO:0006865]; amyloid precursor protein catabolic process [GO:0042987]; associative learning [GO:0008306]; autophagosome maturation [GO:0097352]; autophagosome-lysosome fusion [GO:0061909]; cell migration [GO:0016477]; endocytosis [GO:0006897]; glycerophospholipid biosynthetic process [GO:0046474]; glycolipid transport [GO:0046836]; Golgi to lysosome transport [GO:0090160]; intracellular water homeostasis [GO:0009992]; ionotropic glutamate receptor signaling pathway [GO:0035235]; L-arginine transmembrane transport [GO:1903826]; learning or memory [GO:0007611]; lysosomal lumen acidification [GO:0007042]; lysosomal lumen pH elevation [GO:0035752]; lysosomal protein catabolic process [GO:1905146]; lysosome organization [GO:0007040]; macroautophagy [GO:0016236]; membrane organization [GO:0061024]; negative regulation of apoptotic process [GO:0043066]; negative regulation of catalytic activity [GO:0043086]; negative regulation of neuron apoptotic process [GO:0043524]; negative regulation of proteolysis [GO:0045861]; neuromuscular process controlling balance [GO:0050885]; phagosome-lysosome docking [GO:0090384]; phagosome-lysosome fusion [GO:0090385]; plasma membrane raft organization [GO:0044857]; positive regulation of caveolin-mediated endocytosis [GO:2001288]; positive regulation of Golgi to plasma membrane protein transport [GO:0042998]; positive regulation of pinocytosis [GO:0048549]; positive regulation of protein phosphorylation [GO:0001934]; protein localization to membrane [GO:0072657]; protein localization to plasma membrane [GO:0072659]; protein processing [GO:0016485]; receptor-mediated endocytosis [GO:0006898]; regulation of arginine biosynthetic process [GO:1900079]; regulation of autophagosome maturation [GO:1901096]; regulation of autophagosome size [GO:0016243]; regulation of autophagy [GO:0010506]; regulation of cellular response to osmotic stress [GO:0106049]; regulation of cytoskeleton organization [GO:0051493]; regulation of cytosolic calcium ion concentration [GO:0051480]; regulation of fibroblast migration [GO:0010762]; regulation of filopodium assembly [GO:0051489]; regulation of gene expression [GO:0010468]; regulation of modification of synaptic structure [GO:1905244]; regulation of phagosome maturation [GO:1905162]; regulation of protein localization to plasma membrane [GO:1903076]; regulation of protein processing [GO:0070613]; regulation of short-term neuronal synaptic plasticity [GO:0048172]; regulation of synaptic transmission, GABAergic [GO:0032228]; regulation of synaptic transmission, glutamatergic [GO:0051966]; renal potassium excretion [GO:0036359]; vesicle transport along microtubule [GO:0047496]	hit with GO BP
GN018922	Chromosome_7A	5242	3	156	36.741701640595195	0.8833218653897462	1.210581377970408	153	0	0.9679062659195109	38	0	1.3113367174280879	115	0	30.06219765031099	30	0.3333333333333333	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018923	Chromosome_7A	1726	4	57	39.80301274623407	0.8344387711828468	0.24691358024691357	31	0	0.449438202247191	23	0	0	8	0	0.21710811984368214	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019677	Chromosome_7A	1383	2	47	43.600867678958785	0.7263006167873425	0.5789909015715468	37	0	0.5789909015715468	37	0	NA	NA	NA	0.8004926108374384	56	0	unmethylated (<10%)	Q9NUV9	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (hIAN1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN019678	Chromosome_7A	1128	1	37	44.06028368794326	0.6824960753532182	0.3924646781789639	26	0	0.3924646781789639	26	0	NA	NA	NA	0.5876591576885406	58	0	unmethylated (<10%)	Q9NUV9	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (hIAN1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN018924	Chromosome_7A	9881	8	210	34.51067705697804	0.7138004306173845	2.362958002487324	209	0	1.10803324099723	9	0	2.4078478002378123	200	0	0.8620689655172413	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018925	Chromosome_7A	1124	2	38	41.99288256227758	0.7668911033306401	0	30	0	0	24	0	0	6	0	0.9726224783861671	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018926	Chromosome_7A	312	1	12	41.02564102564103	0.9369369369369369	0.5434782608695652	12	0	0.5434782608695652	12	0	NA	NA	NA	0.4426955238563699	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018927	Chromosome_7A	577	2	5	37.78162911611785	0.24282467805740257	0.6060606060606061	5	0	0.6060606060606061	5	0	NA	NA	NA	0.5227391531625719	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018928	Chromosome_7A	1725	4	55	39.768115942028984	0.8069797904191617	0.4341534008683068	31	0	0.4889975550122249	24	0	0.3546099290780142	7	0	0.3454231433506045	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019680	Chromosome_7A	1383	2	48	43.52856109906001	0.7445741781351997	0.5371530886302597	34	0	0.5371530886302597	34	0	NA	NA	NA	1.5977961432506886	47	0	unmethylated (<10%)	Q9NUV9	GTPase IMAP family member 4 (Immunity-associated nucleotide 1 protein) (IAN-1) (hIAN1) (Immunity-associated protein 4)	NA	hit, no GO BP
GN018929	Chromosome_7A	237	1	9	51.89873417721519	0.5808823529411765	0.33222591362126247	9	0	0.33222591362126247	9	0	NA	NA	NA	4.132002218524681	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019681	Chromosome_7A	669	1	24	42.89985052316891	0.8166005492828807	0.5192878338278932	24	0	0.5192878338278932	24	0	NA	NA	NA	0.4893238434163701	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019682	Chromosome_7A	2932	3	63	38.43792633015007	0.5817240467102528	88.1412952060555	63	1	87.57894736842105	20	1	88.34543370271302	43	1	72.01767304860088	19	0.8421052631578947	methylated (>=50%)	Q28DF4	Protein phosphatase 1H (EC 3.1.3.16)	NA	hit, no GO BP
GN019683	Chromosome_7A	1554	1	41	42.5997425997426	0.5824374725756911	78.45659163987138	41	0.8048780487804879	78.45659163987138	41	0.8048780487804879	NA	NA	NA	0.5171603196991067	39	0	methylated (>=50%)	A5D6U8	Acid phosphatase type 7 (EC 3.1.3.2) (Purple acid phosphatase long form)	NA	hit, no GO BP
GN019870	Chromosome_7A	461	1	23	41.64859002169197	1.1877450431275904	0.2479082739386427	23	0	0.2479082739386427	23	0	NA	NA	NA	2.0527859237536656	81	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019684	Chromosome_7A	19254	28	270	36.02368339046432	0.43836860747231365	93.12143637025355	269	1	94.53541858325667	105	1	92.42602479413628	164	1	91.33986928104575	42	1	methylated (>=50%)	P41252	Isoleucine--tRNA ligase, cytoplasmic (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IRS) (IleRS)	isoleucyl-tRNA aminoacylation [GO:0006428]; osteoblast differentiation [GO:0001649]; tRNA aminoacylation for protein translation [GO:0006418]	hit with GO BP
GN019685	Chromosome_7A	28156	11	475	35.765023440829665	0.5283367759506564	80.12125294712024	438	0.8812785388127854	72.32589895311789	35	0.7428571428571429	80.74418943003674	403	0.8933002481389578	0.17391304347826086	26	0	methylated (>=50%)	P49139	MAP kinase-activated protein kinase 2 (MAPK-activated protein kinase 2) (MAPKAP kinase 2) (MAPKAP-K2) (MAPKAPK-2) (MK-2) (MK2) (EC 2.7.11.1)	3'-UTR-mediated mRNA stabilization [GO:0070935]; DNA damage response [GO:0006974]; inflammatory response [GO:0006954]; macropinocytosis [GO:0044351]; regulation of interleukin-6 production [GO:0032675]; regulation of tumor necrosis factor production [GO:0032680]; response to cytokine [GO:0034097]; response to lipopolysaccharide [GO:0032496]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN018917	Chromosome_7A	4065	4	34	38.031980319803196	0.23556662286330796	73.82075471698113	34	0.9411764705882353	68.80733944954129	10	0.9	75.55555555555556	24	0.9583333333333334	68.7778768956289	37	0.7567567567567568	methylated (>=50%)	Q9Z2F6	B-cell lymphoma 3 protein homolog (BCL-3)	antimicrobial humoral response [GO:0019730]; canonical NF-kappaB signal transduction [GO:0007249]; defense response to bacterium [GO:0042742]; defense response to protozoan [GO:0042832]; DNA damage response [GO:0006974]; DNA damage response, signal transduction by p53 class mediator [GO:0030330]; extracellular matrix organization [GO:0030198]; follicular dendritic cell differentiation [GO:0002268]; germinal center formation [GO:0002467]; humoral immune response mediated by circulating immunoglobulin [GO:0002455]; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator [GO:0042771]; marginal zone B cell differentiation [GO:0002315]; negative regulation of apoptotic process [GO:0043066]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of interleukin-8 production [GO:0032717]; negative regulation of non-canonical NF-kappaB signal transduction [GO:1901223]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of tumor necrosis factor production [GO:0032720]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of translation [GO:0045727]; positive regulation of type II interferon production [GO:0032729]; protein import into nucleus [GO:0006606]; regulation of apoptotic process [GO:0042981]; regulation of non-canonical NF-kappaB signal transduction [GO:1901222]; response to UV-C [GO:0010225]; response to virus [GO:0009615]; spleen development [GO:0048536]; T-helper 1 type immune response [GO:0042088]; T-helper 2 cell differentiation [GO:0045064]	hit with GO BP
GN019687	Chromosome_7A	6023	9	80	36.709281089158225	0.39824120603015073	50.30135610246108	79	0.5569620253164557	52.34521575984991	29	0.5517241379310345	49.554183813443075	50	0.56	0.6286013619696176	85	0	methylated (>=50%)	Q2TA20	Spermatogenesis-associated protein 22	gamete generation [GO:0007276]; homologous chromosome pairing at meiosis [GO:0007129]; meiotic DNA repair synthesis [GO:0000711]; regulation of meiotic cell cycle [GO:0051445]	hit with GO BP
GN019688	Chromosome_7A	13363	5	373	35.19419292075133	0.9032290390260114	2.4991231146965975	370	0	0.4235044997353097	38	0	2.686552894497825	332	0	0.4462293618920125	44	0	unmethylated (<10%)	P19477	Fibrinogen-like protein A (FREP-A)	NA	hit, no GO BP
GN019689	Chromosome_7A	5027	6	87	35.667396061269145	0.5524022320966198	0.5171299288946348	87	0	0.2506265664160401	8	0	0.5421970768505422	79	0	0	18	0	unmethylated (<10%)	Q6AYB3	Pre-mRNA-splicing factor ISY1 homolog	generation of catalytic spliceosome for second transesterification step [GO:0000350]; mRNA 3'-splice site recognition [GO:0000389]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN019690	Chromosome_7A	258	1	11	45.348837209302324	0.8431372549019608	1.0723860589812333	11	0	1.0723860589812333	11	0	NA	NA	NA	0.5608028335301063	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019691	Chromosome_7A	2353	5	71	37.48406289842754	0.8593775720164609	0.6824313601015711	70	0	0.7876712328767124	32	0	0.5915409642117717	38	0	0.47811695476278043	26	0	unmethylated (<10%)	O73746	Metalloproteinase inhibitor 3 (Tissue inhibitor of metalloproteinases 3) (TIMP-3)	negative regulation of membrane protein ectodomain proteolysis [GO:0051045]; response to cytokine [GO:0034097]; response to hormone [GO:0009725]	hit with GO BP
GN019692	Chromosome_7A	519	1	15	42.58188824662813	0.637905604719764	0.8517887563884157	15	0	0.8517887563884157	15	0	NA	NA	NA	0.5342237061769616	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019693	Chromosome_7A	417	1	3	42.68585131894484	0.15793460421663932	12	1	0	12	1	0	NA	NA	NA	6.437768240343348	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018906	Chromosome_7A	981	2	27	42.71151885830785	0.6050022841480128	1.2738853503184713	21	0	1.492537313432836	16	0	0.8849557522123894	5	0	1.7447495961227786	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019694	Chromosome_7A	234	1	10	44.44444444444444	0.8657047724750278	0.6006006006006006	10	0	0.6006006006006006	10	0	NA	NA	NA	0.6316620607974733	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018909	Chromosome_7A	2638	2	79	40.030326004548904	0.7479927498519462	0.7680491551459293	79	0	0.7338551859099804	70	0	0.8928571428571429	9	0	0.46743533811156124	47	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN019696	Chromosome_7A	720	1	20	48.333333333333336	0.47601732174143	87.73784355179704	20	0.95	87.73784355179704	20	0.95	NA	NA	NA	79.8989898989899	22	0.9090909090909091	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019697	Chromosome_7A	1511	3	19	32.36267372600926	0.4809683364047579	57.961783439490446	19	0.5789473684210527	44.680851063829785	9	0.4444444444444444	66.27218934911242	10	0.7	0.43931905546403077	38	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019698	Chromosome_7A	18305	7	212	35.78803605572248	0.3715964727320431	66.63813029706361	206	0.7815533980582524	70.63464837049743	72	0.8611111111111112	65.30914898471367	134	0.7388059701492538	8.80245649948823	25	0	methylated (>=50%)	Q5EBH1	Ras association domain-containing protein 5 (New ras effector 1) (Regulator for cell adhesion and polarization enriched in lymphoid tissues) (RAPL)	negative regulation of cell population proliferation [GO:0008285]; positive regulation of protein ubiquitination [GO:0031398]; regulation of protein localization to nucleus [GO:1900180]; signal transduction [GO:0007165]	hit with GO BP
GN019699	Chromosome_7A	20610	6	140	34.57059679767104	0.2662367116933408	11.9633307868602	121	0.1322314049586777	83.06010928961749	7	0.8571428571428571	7.752063440686195	114	0.08771929824561403	0.7626310772163966	24	0	sparse (10-50%)	Q7TP48	Adipocyte plasma membrane-associated protein	NA	hit, no GO BP
GN019700	Chromosome_7A	2191	4	30	41.716111364673665	0.35623506202814975	0.6479481641468683	30	0	0.5899705014749262	15	0	0.7032348804500703	15	0	0.6695069993913573	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018905	Chromosome_7A	2025	1	73	42.123456790123456	0.8127969121140143	0.5726184279021344	73	0	0.5726184279021344	73	0	NA	NA	NA	0.42283298097251587	45	0	unmethylated (<10%)	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN019701	Chromosome_7A	528	1	33	45.833333333333336	1.2795769993390615	0	2	0	0	2	0	NA	NA	NA	0.36496350364963503	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019702	Chromosome_7A	282	1	0	46.808510638297875	0	NA	0	NA	NA	NA	NA	NA	NA	NA	4.776820673453407	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019703	Chromosome_7A	798	1	17	38.847117794486216	0.5752204884667571	7.6923076923076925	17	0	7.6923076923076925	17	0	NA	NA	NA	3.9530332681017613	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019704	Chromosome_7A	2001	1	74	42.978510744627684	0.8014570568750136	NA	0	NA	NA	NA	NA	NA	NA	NA	2.112676056338028	11	0	NA	A5YVV0	Multicopper oxidase 3 (AgMCO3) (EC 1.10.3.2) (Laccase-3)	NA	hit, no GO BP
GN001853	Chromosome_7A	301	1	13	46.84385382059801	0.8525054466230937	0.5005561735261401	13	0	0.5005561735261401	13	0	NA	NA	NA	0.6672873991309746	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019705	Chromosome_7A	516	1	15	46.89922480620155	0.5289775833788956	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7317073170731707	14	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019706	Chromosome_7A	528	1	0	34.84848484848485	0	NA	0	NA	NA	NA	NA	NA	NA	NA	79.44983818770227	14	0.9285714285714286	NA	NA	NA	NA	no Swiss-Prot hit
GN018903	Chromosome_7A	43891	17	555	34.08899318766945	0.43646491567813833	58.99413854891123	548	0.6131386861313869	77.94935145151328	83	0.7951807228915663	56.92680790865304	465	0.5806451612903226	82.18714768883878	21	0.9047619047619048	methylated (>=50%)	Q9H334	Forkhead box protein P1 (Mac-1-regulated forkhead) (MFH)	cellular response to tumor necrosis factor [GO:0071356]; DNA damage response [GO:0006974]; endothelial cell activation [GO:0042118]; macrophage activation [GO:0042116]; monocyte activation [GO:0042117]; negative regulation of androgen receptor signaling pathway [GO:0060766]; negative regulation of B cell apoptotic process [GO:0002903]; negative regulation of cell growth involved in cardiac muscle cell development [GO:0061052]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of gene expression [GO:0010629]; osteoclast development [GO:0036035]; osteoclast differentiation [GO:0030316]; positive regulation of B cell receptor signaling pathway [GO:0050861]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of hydrogen peroxide-mediated programmed cell death [GO:1901300]; positive regulation of interleukin-21 production [GO:0032745]; positive regulation of smooth muscle cell proliferation [GO:0048661]; regulation of chemokine (C-X-C motif) ligand 2 production [GO:2000341]; regulation of defense response to bacterium [GO:1900424]; regulation of endothelial tube morphogenesis [GO:1901509]; regulation of gene expression [GO:0010468]; regulation of inflammatory response [GO:0050727]; regulation of interleukin-1 beta production [GO:0032651]; regulation of interleukin-12 production [GO:0032655]; regulation of macrophage colony-stimulating factor production [GO:1901256]; regulation of monocyte differentiation [GO:0045655]; regulation of transcription by RNA polymerase II [GO:0006357]; regulation of tumor necrosis factor production [GO:0032680]; response to lipopolysaccharide [GO:0032496]; response to testosterone [GO:0033574]; striatum development [GO:0021756]; T follicular helper cell differentiation [GO:0061470]	hit with GO BP
GN019707	Chromosome_7A	2536	3	90	42.586750788643535	0.783102766798419	0.3246753246753247	90	0	0.38402457757296465	81	0	0	9	0	0.8867276887871853	60	0	unmethylated (<10%)	P86952	Tyrosinase-like protein (Tyrosinase-2)	NA	hit, no GO BP
GN019708	Chromosome_7A	6031	7	85	36.826396949096335	0.41630123014055503	81.75316714344095	85	0.8352941176470589	60.35834266517357	26	0.5769230769230769	86.528367908023	59	0.9491525423728814	4.254795868175111	72	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018901	Chromosome_7A	11584	7	130	38.43232044198895	0.3067229877465193	67.8336686787391	118	0.6949152542372882	84.57792207792208	10	1	66.32548618219037	108	0.6666666666666666	88.89770023790642	27	1	methylated (>=50%)	Q3B7H1	Glutamine amidotransferase-like class 1 domain-containing protein 1 (Ferry endosomal RAB5 effector complex subunit 5) (Fy-5) (Parkinson disease 7 domain-containing protein 1)	NA	hit, no GO BP
GN018900	Chromosome_7A	216	1	8	48.611111111111114	0.631578947368421	0.5780346820809249	8	0	0.5780346820809249	8	0	NA	NA	NA	0.3726435773783428	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018899	Chromosome_7A	7415	5	213	38.17936614969656	0.7883242391753565	0.6019261637239165	212	0	0.582010582010582	75	0	0.6086645184389545	137	0	0.7215619694397284	92	0	unmethylated (<10%)	Q9ZQ47	Glycine-rich domain-containing protein 1 (AtGRDP1)	cellular response to osmotic stress [GO:0071470]; regulation of abscisic acid-activated signaling pathway [GO:0009787]; response to osmotic stress [GO:0006970]	hit with GO BP
GN018898	Chromosome_7A	1137	3	12	36.147757255936675	0.32310315430520037	0	8	0	0	3	0	0	5	0	5	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019709	Chromosome_7A	897	1	32	38.79598662207358	0.9482029598308668	0.8943089430894309	32	0	0.8943089430894309	32	0	NA	NA	NA	0.704225352112676	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019710	Chromosome_7A	7380	5	158	33.68563685636856	0.7562294370694066	0.4875076173065204	158	0	0.4037685060565276	26	0	0.5023923444976076	132	0	0.7126948775055679	53	0	unmethylated (<10%)	F1QYJ6	Sulfotransferase 6B1 (EC 2.8.2.-) (Thyroxine sulfotransferase) (EC 2.8.2.n2)	cellular response to xenobiotic stimulus [GO:0071466]; sulfation [GO:0051923]	hit with GO BP
GN019711	Chromosome_7A	2322	1	74	50.21533161068045	0.5055950661021088	0	1	0	0	1	0	NA	NA	NA	0.5865102639296188	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019712	Chromosome_7A	2974	4	69	40.01344989912575	0.5808330691544767	0.6246746486205101	49	0	0.3824091778202677	19	0	0.7153075822603719	30	0	3.2403240324032403	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019713	Chromosome_7A	3647	5	95	35.06992048258843	0.847334722466788	1.1873031257572086	83	0	0.7501875468867217	25	0	1.395848246241947	58	0	3.006012024048096	80	0	unmethylated (<10%)	O43704	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase 1B2) (Sulfotransferase family cytosolic 1B member 1) (Thyroid hormone sulfotransferase)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; biogenic amine metabolic process [GO:0006576]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; phenol-containing compound metabolic process [GO:0018958]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN019714	Chromosome_7A	563	2	7	36.58969804618117	0.37373162636320534	0	7	0	0	3	0	0	4	0	0.4008746355685131	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018895	Chromosome_7A	3980	6	116	36.30653266331658	0.8865742607720463	1.0402734433050973	116	0	0.6520450503852994	29	0	1.170170567235224	87	0	0.49597024178549287	47	0	unmethylated (<10%)	O43704	Sulfotransferase 1B1 (ST1B1) (EC 2.8.2.1) (Sulfotransferase 1B2) (Sulfotransferase family cytosolic 1B member 1) (Thyroid hormone sulfotransferase)	3'-phosphoadenosine 5'-phosphosulfate metabolic process [GO:0050427]; biogenic amine metabolic process [GO:0006576]; epithelial cell differentiation [GO:0030855]; ethanol catabolic process [GO:0006068]; flavonoid metabolic process [GO:0009812]; phenol-containing compound metabolic process [GO:0018958]; sulfation [GO:0051923]; thyroid hormone metabolic process [GO:0042403]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN019715	Chromosome_7A	1461	2	43	36.824093086926766	0.8691615938018816	1.4836795252225519	43	0	0.29069767441860467	6	0	1.7282479141835518	37	0	0.6137184115523465	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019716	Chromosome_7A	3477	5	88	36.180615473109	0.7736493576436737	0.6232686980609419	88	0	0.9066183136899365	26	0	0.5264787860018582	62	0	0.518341307814992	39	0	unmethylated (<10%)	P52842	Sulfotransferase 2A1 (ST2A1) (EC 2.8.2.2) (Bile salt sulfotransferase) (EC 2.8.2.14) (Hydroxysteroid sulfotransferase) (HST)	cholesterol metabolic process [GO:0008203]; steroid metabolic process [GO:0008202]	hit with GO BP
GN019717	Chromosome_7A	5766	5	132	35.95213319458897	0.711934418133042	1.2347633370270699	132	0	1.3457556935817805	30	0	1.2147262193982433	102	0	0.5996002664890073	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018892	Chromosome_7A	3759	5	86	35.19553072625698	0.7388951109688922	0.39017672710580675	86	0	0.19821605550049554	17	0	0.44802867383512546	69	0	0.4296455424274973	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018891	Chromosome_7A	594	2	19	37.03703703703704	0.9376869391824526	0.22321428571428573	19	0	0.35650623885918004	13	0	0	6	0	1.2915129151291513	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018890	Chromosome_7A	591	2	19	36.54822335025381	0.9656862745098039	1.1278195488721805	16	0	1.5432098765432098	12	0	0.4807692307692308	4	0	0.6006006006006006	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018889	Chromosome_7A	1227	2	43	35.85982070089649	1.090103305785124	0.5555555555555556	43	0	0.46153846153846156	15	0	0.6015037593984962	28	0	0.9402030838661151	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019718	Chromosome_7A	1160	4	31	35.60344827586207	0.8459186073864973	0.25673940949935814	31	0	0.24509803921568626	19	0	0.2695417789757412	12	0	0.4010207801676996	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018888	Chromosome_7A	591	2	18	36.37901861252115	0.9221567267683772	0.468384074941452	18	0	0.3597122302158273	14	0	0.6711409395973155	4	0	0.74235807860262	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018887	Chromosome_7A	1261	2	41	42.10943695479778	0.7366493787757894	0.46801872074882994	41	0	0.46801872074882994	41	0	NA	NA	NA	0.3010536879076769	44	0	unmethylated (<10%)	Q8BZ20	Protein mono-ADP-ribosyltransferase PARP12 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 12) (ARTD12) (Poly [ADP-ribose] polymerase 12) (PARP-12) (Zinc finger CCCH domain-containing protein 1)	cell-cell adhesion mediated by cadherin [GO:0044331]; protein auto-ADP-ribosylation [GO:0070213]; transepithelial transport [GO:0070633]	hit with GO BP
GN018886	Chromosome_7A	666	1	8	40.090090090090094	0.3025210084033613	2.5280898876404496	8	0	2.5280898876404496	8	0	NA	NA	NA	0.8695652173913043	47	0	unmethylated (<10%)	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN018885	Chromosome_7A	363	1	18	46.83195592286501	0.9170526315789473	0.9787928221859706	18	0	0.9787928221859706	18	0	NA	NA	NA	0.5905511811023622	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018881	Chromosome_7A	453	1	21	45.47461368653422	0.9318248604172789	1.1128775834658187	21	0	1.1128775834658187	21	0	NA	NA	NA	0.45422781271837875	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018880	Chromosome_7A	258	1	12	52.325581395348834	0.6795434591747147	6.965174129353234	12	0	6.965174129353234	12	0	NA	NA	NA	4.131054131054131	47	0.02127659574468085	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019720	Chromosome_7A	639	1	17	41.31455399061033	0.6429712932820361	0.7662835249042146	17	0	0.7662835249042146	17	0	NA	NA	NA	0.6649616368286445	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019721	Chromosome_7A	24456	12	813	38.203303892705264	0.9114912178318232	1.089957333906995	778	0	0.7451923076923077	307	0	1.2365234275203107	471	0	1.315037164093768	70	0	unmethylated (<10%)	Q6V0I7	Protocadherin Fat 4 (hFat4) (Cadherin family member 14) (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)	axonogenesis [GO:0007409]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebral cortex development [GO:0021987]; epithelial cell differentiation [GO:0030855]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; neurogenesis [GO:0022008]	hit with GO BP
GN019722	Chromosome_7A	576	2	35	48.611111111111114	1.0287813839559095	0.1440922190201729	35	0	0.14814814814814814	34	0	0	1	0	0.5813953488372093	60	0	unmethylated (<10%)	E9PVD3	Protocadherin-16 (Protein Dchs1) (Protein dachsous homolog 1)	anatomical structure morphogenesis [GO:0009653]; branching involved in ureteric bud morphogenesis [GO:0001658]; cell migration [GO:0016477]; cell migration involved in endocardial cushion formation [GO:0003273]; cell-cell adhesion [GO:0098609]; cochlea development [GO:0090102]; condensed mesenchymal cell proliferation [GO:0072137]; digestive tract development [GO:0048565]; establishment of planar polarity [GO:0001736]; gene expression [GO:0010467]; heart morphogenesis [GO:0003007]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; kidney development [GO:0001822]; mitral valve development [GO:0003174]; mitral valve formation [GO:0003192]; mitral valve morphogenesis [GO:0003183]; nephron development [GO:0072006]; neural tube development [GO:0021915]; neurogenesis [GO:0022008]; ossification involved in bone maturation [GO:0043931]; pattern specification process [GO:0007389]; post-anal tail morphogenesis [GO:0036342]; protein localization to plasma membrane [GO:0072659]; septin cytoskeleton organization [GO:0032185]	hit with GO BP
GN018877	Chromosome_7A	696	1	36	66.52298850574712	0.7401630627437079	1.4705882352941178	6	0	1.4705882352941178	6	0	NA	NA	NA	0.48465266558966075	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019724	Chromosome_7A	933	1	38	58.842443729903536	0.7243788819875776	0.8415147265077139	38	0	0.8415147265077139	38	0	NA	NA	NA	0.44679122664500404	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018874	Chromosome_7A	504	1	3	45.63492063492063	0.12753036437246965	95.29411764705883	3	1	95.29411764705883	3	1	NA	NA	NA	94.07783417935703	23	1	NA	NA	NA	NA	no Swiss-Prot hit
GN018873	Chromosome_7A	33688	20	507	35.588340061743054	0.47748449067259785	87.62902292726	505	0.9326732673267327	93.65601503759399	89	1	86.73173120649246	416	0.9182692307692307	89.36605316973416	17	1	methylated (>=50%)	Q63505	General transcription factor 3C polypeptide 1 (TF3C-alpha) (TFIIIC box B-binding subunit) (Transcription factor IIIC 220 kDa subunit) (TFIIIC 220 kDa subunit) (TFIIIC220) (Transcription factor IIIC subunit alpha)	5S class rRNA transcription by RNA polymerase III [GO:0042791]; transcription initiation at RNA polymerase III promoter [GO:0006384]	hit with GO BP
GN018872	Chromosome_7A	5651	5	231	43.549814192178374	0.9090333632774145	0.8298022598870056	174	0	0.5773672055427251	57	0	0.940996948118006	117	0	0.5363036303630363	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018871	Chromosome_7A	201	1	1	42.78606965174129	0.10965630114566285	1.4705882352941178	1	0	1.4705882352941178	1	0	NA	NA	NA	2.8164116828929067	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019725	Chromosome_7A	2429	3	81	37.752161383285305	0.9369803125982227	1.7767249037607344	81	0	1.9230769230769231	33	0	1.7206063088897992	48	0	1.6934433347807207	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018870	Chromosome_7A	327	1	15	43.11926605504587	1.0189031990029083	0.22075055187637968	15	0	0.22075055187637968	15	0	NA	NA	NA	0.50682261208577	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019726	Chromosome_7A	483	1	15	44.72049689440994	0.6230650154798761	0.7009345794392523	15	0	0.7009345794392523	15	0	NA	NA	NA	1.437632135306554	47	0	unmethylated (<10%)	Q99758	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ABC-C transporter) (ATP-binding cassette sub-family A member 3) (ATP-binding cassette transporter 3) (ATP-binding cassette 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lipid transport [GO:0006869]; lung development [GO:0030324]; organelle assembly [GO:0070925]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; response to xenobiotic stimulus [GO:0009410]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN019727	Chromosome_7A	1627	3	50	39.21327596803933	0.8109293539479849	0.6424581005586593	50	0	0.8130081300813008	31	0	0.36603221083455345	19	0	1.25	57	0	unmethylated (<10%)	A0A0G2K1Q8	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lung development [GO:0030324]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of lipid transport [GO:0032368]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN018869	Chromosome_7A	9457	10	137	34.863064396743155	0.4788301340094169	81.29045951395521	136	0.9264705882352942	79.16201117318435	39	0.8974358974358975	81.78959779903053	97	0.9381443298969072	70.1923076923077	6	0.8333333333333334	methylated (>=50%)	Q9LVX0	Probable E3 ubiquitin-protein ligase ARI3 (EC 2.3.2.31) (ARIADNE-like protein ARI3) (Protein ariadne homolog 3) (RING-type E3 ubiquitin transferase ARI3)	protein ubiquitination [GO:0016567]	hit with GO BP
GN018848	Chromosome_7A	319	2	8	39.18495297805643	0.665623369848722	3.1390134529147984	8	0	3	7	0	4.3478260869565215	1	0	4.525728456292622	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018849	Chromosome_7A	2747	2	52	37.71386967601019	0.5323643410852713	5.899830220713073	52	0	5.959302325581396	32	0	5.816326530612245	20	0	5.337742087860179	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018850	Chromosome_7A	2302	4	22	35.57775847089487	0.30327927755287803	66.57718120805369	20	0.8	64.63022508038586	17	0.7647058823529411	76.42276422764228	3	1	73.12348668280872	10	0.9	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018851	Chromosome_7A	318	1	5	40.56603773584906	0.38498789346246975	17.647058823529413	1	0	17.647058823529413	1	0	NA	NA	NA	19.825708061002178	12	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018791	Chromosome_7A	636	1	13	41.0377358490566	0.4915576694411415	0	10	0	0	10	0	NA	NA	NA	0.6097560975609756	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018852	Chromosome_7A	624	1	17	42.1474358974359	0.6135338345864662	1.1682242990654206	17	0	1.1682242990654206	17	0	NA	NA	NA	0.39436619718309857	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018853	Chromosome_7A	578	3	7	36.15916955017301	0.4129414166156358	0.3824091778202677	7	0	0	3	0	0.6369426751592356	4	0	1.145912910618793	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018854	Chromosome_7A	4302	1	45	43.816829381682936	0.2519902530966724	0.19990004997501248	45	0	0.19990004997501248	45	0	NA	NA	NA	1.056105610561056	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018855	Chromosome_7A	1112	3	10	35.34172661870504	0.28803812878827123	0.42075736325385693	10	0	0.5780346820809249	7	0	0	3	0	1.5107495642068565	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018856	Chromosome_7A	384	1	21	51.5625	0.8241185487991824	0.5015673981191222	21	0	0.5015673981191222	21	0	NA	NA	NA	0.6646726487205051	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018857	Chromosome_7A	198	1	4	39.39393939393939	0.5210526315789473	0.9487666034155597	4	0	0.9487666034155597	4	0	NA	NA	NA	0.5655634687892752	61	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018858	Chromosome_7A	3135	2	43	40.57416267942584	0.3849294845619876	0.6394884092725819	43	0	0.7164179104477612	30	0	0.4836759371221282	13	0	0.6987577639751553	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018859	Chromosome_7A	591	1	19	42.978003384094755	0.6997133599202393	0.3395585738539898	19	0	0.3395585738539898	19	0	NA	NA	NA	0.8513053348467651	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018860	Chromosome_7A	672	1	15	37.5	0.6389452332657201	1.9103600293901544	15	0	1.9103600293901544	15	0	NA	NA	NA	1.2324929971988796	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015795	Chromosome_7A	341	1	25	65.10263929618769	0.692132824551433	NA	0	NA	NA	NA	NA	NA	NA	NA	26.666666666666668	15	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018864	Chromosome_7A	16616	17	293	34.876023110255176	0.5879641740112552	95.55603611396442	285	1	96.48616125150421	69	1	95.28657091061218	216	1	0.9086320040383644	60	0	methylated (>=50%)	Q2KIA6	U4/U6 small nuclear ribonucleoprotein Prp3 (Pre-mRNA-splicing factor 3)	mRNA splicing, via spliceosome [GO:0000398]; spliceosomal tri-snRNP complex assembly [GO:0000244]	hit with GO BP
GN018865	Chromosome_7A	742	2	29	39.08355795148248	1.0283393070489846	0.7931262392597488	29	0	0.8833922261484098	24	0	0.5249343832020997	5	0	52.485089463220675	51	0.5490196078431373	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018866	Chromosome_7A	582	1	54	49.14089347079038	1.561639751552795	0.4149377593360996	54	0	0.4149377593360996	54	0	NA	NA	NA	0.5992808629644427	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018867	Chromosome_7A	261	1	15	47.509578544061306	1.0357142857142858	1.342281879194631	15	0	1.342281879194631	15	0	NA	NA	NA	0.9336099585062241	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018868	Chromosome_7A	1308	4	14	32.11009174311926	0.41736752136752137	0.5021971123666039	14	0	0.6006006006006006	11	0	0.3367003367003367	3	0	1.6085790884718498	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018838	Chromosome_7A	291	1	7	48.10996563573883	0.42121588089330025	0.8583690987124464	6	0	0.8583690987124464	6	0	NA	NA	NA	0.11123470522803114	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018834	Chromosome_7A	183	1	5	47.540983606557376	0.49836601307189543	NA	0	NA	NA	NA	NA	NA	NA	NA	2.2140221402214024	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018836	Chromosome_7A	183	1	5	47.540983606557376	0.49836601307189543	2.1739130434782608	5	0	2.1739130434782608	5	0	NA	NA	NA	0.9487666034155597	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018835	Chromosome_7A	183	1	4	46.994535519125684	0.4066666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	0.42735042735042733	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018837	Chromosome_7A	183	1	5	47.540983606557376	0.49836601307189543	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7299270072992701	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018833	Chromosome_7A	183	1	4	46.994535519125684	0.4066666666666667	NA	0	NA	NA	NA	NA	NA	NA	NA	0.2528445006321112	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018832	Chromosome_7A	195	1	3	43.07692307692308	0.3333333333333333	0.9009009009009009	3	0	0.9009009009009009	3	0	NA	NA	NA	0.7662835249042146	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018831	Chromosome_7A	9204	5	276	36.429813124728376	0.9065727940798602	0.5364395739137099	276	0	0.8126934984520123	67	0	0.4682274247491639	209	0	0.574585635359116	65	0	unmethylated (<10%)	P21837	Crystal protein	endocytosis [GO:0006897]; mitotic cytokinesis [GO:0000281]; sorocarp development [GO:0030587]	hit with GO BP
GN018830	Chromosome_7A	13463	10	358	36.574314788680084	0.7956220067733669	2.626902143729868	358	0	1.1245110821382007	144	0	3.403538331929233	214	0	0.6708407871198568	63	0	unmethylated (<10%)	Q6XUX0	Dual serine/threonine and tyrosine protein kinase (EC 2.7.12.1) (Dusty protein kinase) (Dusty PK) (Receptor-interacting serine/threonine-protein kinase 5)	cellular response to fibroblast growth factor stimulus [GO:0044344]; negative regulation of apoptotic process [GO:0043066]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of fibroblast growth factor receptor signaling pathway [GO:0045743]	hit with GO BP
GN019731	Chromosome_7A	483	2	18	43.064182194616976	0.8258763180393275	54.516129032258064	18	0.8333333333333334	53.9647577092511	12	0.8333333333333334	56.024096385542165	6	0.8333333333333334	51.26373626373626	33	0.6363636363636364	methylated (>=50%)	Q6GNL7	Cytosolic 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (FDH) (EC 1.5.1.6) (Aldehyde dehydrogenase family 1 member L1)	10-formyltetrahydrofolate catabolic process [GO:0009258]; aldehyde metabolic process [GO:0006081]; NADPH regeneration [GO:0006740]; one-carbon metabolic process [GO:0006730]	hit with GO BP
GN018826	Chromosome_7A	309	1	13	45.30744336569579	0.8224815724815725	0.8298755186721992	13	0	0.8298755186721992	13	0	NA	NA	NA	0.6063432835820896	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004422	Chromosome_7A	375	1	4	36.53333333333333	0.319693094629156	71.42857142857143	4	1	71.42857142857143	4	1	NA	NA	NA	11.222152821153445	70	0.11428571428571428	NA	NA	NA	NA	no Swiss-Prot hit
GN019732	Chromosome_7A	372	1	32	65.05376344086021	0.8827586206896552	0.6322444678609063	32	0	0.6322444678609063	32	0	NA	NA	NA	0.4488879820444807	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018828	Chromosome_7A	201	1	7	51.74129353233831	0.522077922077922	1.0273972602739727	7	0	1.0273972602739727	7	0	NA	NA	NA	0.5869632375656472	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019733	Chromosome_7A	540	1	30	45.18518518518518	1.0887096774193548	0.6944444444444444	30	0	0.6944444444444444	30	0	NA	NA	NA	0.6460296096904441	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019734	Chromosome_7A	2471	4	65	37.19142047753946	0.7703800698361536	0.6810778797749482	65	0	0.6276150627615062	34	0	0.7205352547606794	31	0	0.6295907660020986	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019735	Chromosome_7A	637	3	14	39.24646781789639	0.6009029041169732	0.7692307692307693	6	0	0.7692307692307693	6	0	NA	NA	NA	3.427719821162444	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018818	Chromosome_7A	637	3	14	39.24646781789639	0.6009029041169732	NA	0	NA	NA	NA	NA	NA	NA	NA	1.3897937024972855	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019736	Chromosome_7A	312	1	5	43.26923076923077	0.3943377148634985	3.30188679245283	5	0	3.30188679245283	5	0	NA	NA	NA	2.284595300261097	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019737	Chromosome_7A	402	1	20	44.776119402985074	0.9956656346749226	1.9345238095238095	20	0	1.9345238095238095	20	0	NA	NA	NA	0.887228578099463	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018816	Chromosome_7A	327	1	8	49.54128440366973	0.39871970736168266	1.5686274509803921	8	0	1.5686274509803921	8	0	NA	NA	NA	0.6	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018815	Chromosome_7A	330	1	8	50.303030303030305	0.3841117415975557	0	8	0	0	8	0	NA	NA	NA	0.45599635202918376	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018814	Chromosome_7A	351	1	10	46.43874643874644	0.5300513440048323	0.26246719160104987	10	0	0.26246719160104987	10	0	NA	NA	NA	0.3255208333333333	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019739	Chromosome_7A	336	1	9	48.80952380952381	0.45	0.29239766081871343	9	0	0.29239766081871343	9	0	NA	NA	NA	0.8375209380234506	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019740	Chromosome_7A	372	1	9	46.505376344086024	0.44819277108433736	0.4576659038901602	9	0	0.4576659038901602	9	0	NA	NA	NA	0.7258064516129032	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018821	Chromosome_7A	321	1	24	46.10591900311527	1.410989010989011	1.3710368466152527	24	0	1.3710368466152527	24	0	NA	NA	NA	0.9672619047619048	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018822	Chromosome_7A	645	1	29	45.116279069767444	0.8848155156102177	18.938053097345133	29	0	18.938053097345133	29	0	NA	NA	NA	0.9652509652509652	20	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018824	Chromosome_7A	5769	3	60	40.12827179753857	0.2814343116673198	15.601851851851851	60	0	15.88287488908607	34	0	15.295256534365924	26	0	8.308157099697885	20	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018803	Chromosome_7A	453	1	15	48.34437086092715	0.5782978723404255	95.78713968957871	15	1	95.78713968957871	15	1	NA	NA	NA	95.3108718304967	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019742	Chromosome_7A	8788	9	157	35.34365043240783	0.5769587180516527	82.75638251839031	155	0.9483870967741935	93.47826086956522	45	1	80.20182175388462	110	0.9272727272727272	93.8063504508036	30	1	methylated (>=50%)	Q6DFC2	Coiled-coil domain-containing protein 77	NA	hit, no GO BP
GN019743	Chromosome_7A	11160	5	238	37.096774193548384	0.6233197158348478	8.413948256467942	238	0	9.058402860548272	120	0	7.572614107883817	118	0	7.381029459371965	60	0	unmethylated (<10%)	Q69Z37	Sterile alpha motif domain-containing protein 9-like (SAM domain-containing protein 9-like)	common myeloid progenitor cell proliferation [GO:0035726]; endosomal vesicle fusion [GO:0034058]; hematopoietic progenitor cell differentiation [GO:0002244]; regulation of protein catabolic process [GO:0042176]; spleen development [GO:0048536]; stem cell division [GO:0017145]	hit with GO BP
GN019744	Chromosome_7A	17114	23	470	37.296949865607104	0.7897220806787801	0.8089782557867664	459	0	0.8606777837547068	127	0	0.7907388663967612	332	0	1.6846361185983827	51	0	unmethylated (<10%)	Q9HCF6	Transient receptor potential cation channel subfamily M member 3 (Long transient receptor potential channel 3) (LTrpC-3) (LTrpC3) (Melastatin-2) (MLSN2)	calcium ion transmembrane transport [GO:0070588]; calcium ion transport [GO:0006816]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; protein homotetramerization [GO:0051289]; zinc ion transmembrane transport [GO:0071577]	hit with GO BP
GN019745	Chromosome_7A	1975	5	61	38.32911392405063	0.8434144019266042	0.528084493518963	61	0	0.9280742459396751	15	0	0.423728813559322	46	0	0.4638577502899111	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019746	Chromosome_7A	9552	6	227	37.971105527638194	0.6594658710389694	0.6410256410256411	222	0	0.5453020134228188	67	0	0.6744868035190615	155	0	0.6679764243614931	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018806	Chromosome_7A	929	2	27	38.64370290635092	0.7786366176196685	0.6655574043261231	27	0	0.7285974499089253	25	0	0	2	0	0.8498583569405099	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018807	Chromosome_7A	255	1	9	50.588235294117645	0.5573093734822729	2.9411764705882355	3	0	2.9411764705882355	3	0	NA	NA	NA	0.723589001447178	29	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019747	Chromosome_7A	303	1	22	47.85478547854785	1.268747620860297	1.2012012012012012	22	0	1.2012012012012012	22	0	NA	NA	NA	20.21276595744681	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021443	Chromosome_7A	2722	11	52	40.99926524614254	0.4575692040124265	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019748	Chromosome_7A	387	1	19	46.51162790697674	0.9302884615384616	1.3605442176870748	9	0	1.3605442176870748	9	0	NA	NA	NA	0.38860103626943004	39	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN018801	Chromosome_7A	3326	3	25	29.404690318701142	0.34843716607231906	0.3427592116538132	24	0	0.35587188612099646	9	0	0.33860045146726864	15	0	0.48562548562548563	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018800	Chromosome_7A	2585	3	42	38.56866537717602	0.4392523364485981	4.784240150093809	40	0	2.7777777777777777	12	0	5.294117647058823	28	0	4.550264550264551	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019749	Chromosome_7A	894	2	24	38.3668903803132	0.764102564102564	0.5692599620493358	24	0	0.9287925696594427	18	0	0	6	0	0.4553734061930783	45	0	unmethylated (<10%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN019750	Chromosome_7A	1121	2	32	37.10972346119536	0.8319109461966605	0.41171088746569073	32	0	0.1091703056768559	13	0	0.6299212598425197	19	0	3.1767337807606264	65	0	unmethylated (<10%)	Q9U8W7	Techylectin-5B	cell-cell adhesion [GO:0098609]; positive regulation of heterotypic cell-cell adhesion [GO:0034116]	hit with GO BP
GN018799	Chromosome_7A	848	2	25	35.02358490566038	0.976508521418701	0.3187250996015936	25	0	0.13513513513513514	15	0	0.5825242718446602	10	0	0.5228136882129277	58	0	unmethylated (<10%)	Q9U8W7	Techylectin-5B	cell-cell adhesion [GO:0098609]; positive regulation of heterotypic cell-cell adhesion [GO:0034116]	hit with GO BP
GN018798	Chromosome_7A	705	2	6	33.758865248226954	0.2994690265486726	2.386634844868735	6	0	2.386634844868735	6	0	NA	NA	NA	1.321003963011889	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018797	Chromosome_7A	2005	4	15	31.97007481296758	0.2930429698918445	0	3	0	0	2	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018796	Chromosome_7A	1121	2	30	38.44781445138269	0.7266009852216748	0.6420545746388443	30	0	0.418702023726448	11	0	0.8323424494649228	19	0	0.360198108959928	62	0	unmethylated (<10%)	Q9Y264	Angiopoietin-4 (ANG-4) (Angiopoietin-3) (ANG-3)	angiogenesis [GO:0001525]; blood coagulation [GO:0007596]; cellular response to hypoxia [GO:0071456]; negative regulation of angiogenesis [GO:0016525]; negative regulation of apoptotic process [GO:0043066]; negative regulation of blood vessel endothelial cell migration [GO:0043537]; positive regulation of angiogenesis [GO:0045766]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; signal transduction [GO:0007165]; Tie signaling pathway [GO:0048014]	hit with GO BP
GN002582	Chromosome_7A	1440	1	52	45.763888888888886	0.6987421148893285	0.36900369003690037	18	0	0.36900369003690037	18	0	NA	NA	NA	1.5427769985974755	44	0	unmethylated (<10%)	O02373	UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC 1.1.1.22) (Protein sugarless) (Protein suppenkasper)	chondroitin sulfate proteoglycan biosynthetic process [GO:0050650]; epithelial cell migration, open tracheal system [GO:0007427]; fibroblast growth factor receptor signaling pathway [GO:0008543]; glycosaminoglycan biosynthetic process [GO:0006024]; heparan sulfate proteoglycan biosynthetic process [GO:0015012]; mesoderm migration involved in gastrulation [GO:0007509]; segment polarity determination [GO:0007367]; UDP-glucuronate biosynthetic process [GO:0006065]	hit with GO BP
GN018794	Chromosome_7A	57959	15	630	33.86876930243793	0.37935169871557517	85.5282077306944	413	0.9661016949152542	88.11667266834714	56	0.9107142857142857	85.18376539364608	357	0.9747899159663865	0.8140531276778064	36	0	methylated (>=50%)	E7F654	Polynucleotide 5'-hydroxyl-kinase NOL9 (EC 2.7.1.78) (Nucleolar protein 9)	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000448]; definitive hemopoiesis [GO:0060216]; digestive tract development [GO:0048565]; exocrine pancreas development [GO:0031017]; liver development [GO:0001889]; pancreas morphogenesis [GO:0061113]; rRNA processing [GO:0006364]	hit with GO BP
GN002581	Chromosome_7A	3762	9	35	32.45614035087719	0.35461508629047894	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN018793	Chromosome_7A	14733	7	436	37.18183669313785	0.8565103763873851	3.0220221829287897	424	0	1.1929107021131562	191	0	3.860883157483392	233	0	0.8532423208191127	50	0	unmethylated (<10%)	Q3UVX5	Metabotropic glutamate receptor 5 (mGluR5)	associative learning [GO:0008306]; cellular response to amyloid-beta [GO:1904646]; chemical synaptic transmission [GO:0007268]; cognition [GO:0050890]; conditioned place preference [GO:1990708]; desensitization of G protein-coupled receptor signaling pathway [GO:0002029]; G protein-coupled glutamate receptor signaling pathway [GO:0007216]; learning [GO:0007612]; learning or memory [GO:0007611]; locomotory behavior [GO:0007626]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of dendritic spine morphogenesis [GO:0061002]; negative regulation of excitatory postsynaptic potential [GO:0090394]; operant conditioning [GO:0035106]; phospholipase C-activating G protein-coupled glutamate receptor signaling pathway [GO:0007206]; positive regulation of calcium-mediated signaling [GO:0050850]; positive regulation of cellular response to hypoxia [GO:1900039]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of dopamine secretion [GO:0033603]; positive regulation of long-term neuronal synaptic plasticity [GO:0048170]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of neural precursor cell proliferation [GO:2000179]; positive regulation of sensory perception of pain [GO:1904058]; protein localization to nuclear inner membrane [GO:0036228]; protein phosphorylation [GO:0006468]; regulation of DNA-templated transcription [GO:0006355]; regulation of long-term neuronal synaptic plasticity [GO:0048169]; regulation of long-term synaptic depression [GO:1900452]; regulation of synaptic transmission, glutamatergic [GO:0051966]; sensory perception of hot stimulus [GO:0062036]; synapse organization [GO:0050808]; temperature homeostasis [GO:0001659]	hit with GO BP
GN018792	Chromosome_7A	516	1	18	37.5968992248062	1.0113240418118468	12.046332046332047	18	0	12.046332046332047	18	0	NA	NA	NA	1.6041162227602905	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019752	Chromosome_7A	636	1	14	41.19496855345912	0.5248452696728558	0.2127659574468085	14	0	0.2127659574468085	14	0	NA	NA	NA	1.9625741670470105	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019753	Chromosome_7A	2811	5	65	37.99359658484525	0.6414045852977003	64.79699601032621	65	0.6615384615384615	85.18518518518519	15	0.8	60.01159084323385	50	0.62	2.2900763358778624	56	0	methylated (>=50%)	Q03346	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52)	protein localization to mitochondrion [GO:0070585]; protein processing [GO:0016485]	hit with GO BP
GN019754	Chromosome_7A	1395	4	17	36.344086021505376	0.3699341715284061	92.78131634819533	17	1	94.94163424124514	10	1	90.18691588785046	7	1	48.12821980538065	56	0.6607142857142857	methylated (>=50%)	Q42290	Probable mitochondrial-processing peptidase subunit beta, mitochondrial (EC 3.4.24.64) (Beta-MPP) (Complex III subunit I) (Core protein I) (Cytochrome b-c1 complex subunit 1, mitochondrial) (Ubiquinol-cytochrome c oxidoreductase core protein 1)	proteolysis [GO:0006508]	hit with GO BP
GN019755	Chromosome_7A	674	2	17	44.362017804154306	0.5168711656441718	96.73590504451039	17	1	96.84684684684684	13	1	96.52173913043478	4	1	93.48861831656961	34	1	methylated (>=50%)	Q3SZ71	Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP)	protein processing [GO:0016485]	hit with GO BP
GN019756	Chromosome_7A	1378	3	13	34.1799709724238	0.32312409812409815	91.16883116883118	13	1	95.40229885057471	3	1	89.93288590604027	10	1	89.23465096719933	17	1	methylated (>=50%)	Q9CZ13	Cytochrome b-c1 complex subunit 1, mitochondrial (Complex III subunit 1) (Core protein I) (Ubiquinol-cytochrome-c reductase complex core protein 1)	cellular respiration [GO:0045333]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]; mitochondrial respiratory chain complex III assembly [GO:0034551]; response to activity [GO:0014823]; response to alkaloid [GO:0043279]	hit with GO BP
GN018790	Chromosome_7A	462	1	20	45.887445887445885	0.8270676691729323	1.0688836104513064	20	0	1.0688836104513064	20	0	NA	NA	NA	0.7467752885268161	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019757	Chromosome_7A	3489	8	59	38.37775867010605	0.46020791415157614	89.4059116183787	59	0.9661016949152542	91.52854511970534	31	0.967741935483871	87.47203579418344	28	0.9642857142857143	85.94132029339853	30	0.9666666666666667	methylated (>=50%)	Q6NYH1	Intraflagellar transport protein 122 homolog	camera-type eye morphogenesis [GO:0048593]; cilium assembly [GO:0060271]; heart development [GO:0007507]; intraciliary retrograde transport [GO:0035721]; intraciliary transport [GO:0042073]; melanosome transport [GO:0032402]; mesonephros development [GO:0001823]; negative regulation of smoothened signaling pathway [GO:0045879]; non-motile cilium assembly [GO:1905515]; opsin transport [GO:0036372]; photoreceptor cell maintenance [GO:0045494]; photoreceptor cell morphogenesis [GO:0008594]; protein localization to cilium [GO:0061512]; regulation of smoothened signaling pathway [GO:0008589]	hit with GO BP
GN001404	Chromosome_7A	1368	1	16	42.17836257309941	0.2636409626364096	3.4324942791762014	14	0	3.4324942791762014	14	0	NA	NA	NA	1.1682242990654206	49	0	unmethylated (<10%)	Q9Y4A0	Jerky protein homolog-like (Human homolog of mouse jerky gene protein) (HHMJG)	central nervous system development [GO:0007417]	hit with GO BP
GN001867	Chromosome_7A	1299	2	15	35.48883756735951	0.36840612592172434	3.5416666666666665	15	0	4.1116005873715125	9	0	2.150537634408602	6	0	0.5799202609641174	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018789	Chromosome_7A	3979	3	84	38.87911535561699	0.5782669776261428	94.862934807648	84	1	94.8318293683347	26	1	94.8750800768738	58	1	94.7420634920635	17	1	methylated (>=50%)	Q5T653	Large ribosomal subunit protein uL2m (39S ribosomal protein L2, mitochondrial) (L2mt) (MRP-L2)	mitochondrial translation [GO:0032543]	hit with GO BP
GN019759	Chromosome_7A	963	1	26	44.85981308411215	0.5369389461945916	96.93564862104188	26	1	96.93564862104188	26	1	NA	NA	NA	87.11885500933417	21	0.9047619047619048	methylated (>=50%)	Q1LZ75	DNA excision repair protein ERCC-1	double-strand break repair [GO:0006302]; mitotic recombination [GO:0006312]; negative regulation of telomere maintenance [GO:0032205]; nucleotide-excision repair [GO:0006289]; response to oxidative stress [GO:0006979]; telomere maintenance [GO:0000723]; UV-damage excision repair [GO:0070914]	hit with GO BP
GN019760	Chromosome_7A	324	2	4	36.111111111111114	0.3793911007025761	4.166666666666667	2	0	4.166666666666667	2	0	NA	NA	NA	2.42914979757085	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018787	Chromosome_7A	25129	13	531	35.14266385451072	0.6854952210805093	3.91380675364015	531	0.003766478342749529	0.9850107066381156	41	0	4.169785896092229	490	0.004081632653061225	0.8218373936014088	46	0	unmethylated (<10%)	Q7JQD3	Gelsolin-like protein 1 (Actin-modulator) (EWAM) (EWAM-P1)	actin filament capping [GO:0051693]; actin filament polymerization [GO:0030041]; actin filament severing [GO:0051014]; actin nucleation [GO:0045010]	hit with GO BP
GN011257	Chromosome_7A	1274	1	47	37.44113029827316	1.0532259199324563	0.6531454107940873	46	0	0.6531454107940873	46	0	NA	NA	NA	0.5738880918220947	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019761	Chromosome_7A	3958	5	100	34.9166245578575	0.8289612851203754	0.6362479549172878	100	0	0.6548175865294668	21	0	0.631768953068592	79	0	0.5565862708719852	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018786	Chromosome_7A	3686	4	84	35.13293543136191	0.7386667811797712	0.5619146722164412	84	0	0.3978779840848806	13	0	0.5924463095531968	71	0	0.6369426751592356	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018785	Chromosome_7A	264	1	7	50.75757575757576	0.4117647058823529	0.8333333333333334	7	0	0.8333333333333334	7	0	NA	NA	NA	1.477485928705441	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018847	Chromosome_7A	979	1	31	40.55158324821246	0.770631252856635	0.8709422011084719	31	0	0.8709422011084719	31	0	NA	NA	NA	1.2476007677543186	41	0	unmethylated (<10%)	P94547	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (Long-chain acyl-CoA synthetase)	NA	hit, no GO BP
GN019762	Chromosome_7A	579	1	6	40.75993091537133	0.2554411764705882	1.3157894736842106	6	0	1.3157894736842106	6	0	NA	NA	NA	1.9607843137254901	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018846	Chromosome_7A	1640	1	54	40.609756097560975	0.8043231460878253	0.3428011753183154	54	0	0.3428011753183154	54	0	NA	NA	NA	0.4789599726308587	85	0	unmethylated (<10%)	Q17QJ1	Medium-chain acyl-CoA ligase ACSF2, mitochondrial (EC 6.2.1.2)	NA	hit, no GO BP
GN019763	Chromosome_7A	7339	7	108	35.53617659081619	0.4665895504596067	92.90944123314065	108	0.9907407407407407	95.9830866807611	15	1	92.48428132767948	93	0.989247311827957	95.44830741079598	66	1	methylated (>=50%)	Q5R8H3	B-cell receptor-associated protein 31 (BCR-associated protein 31) (Bap31)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; protein localization to endoplasmic reticulum exit site [GO:0070973]	hit with GO BP
GN019764	Chromosome_7A	1070	5	15	34.48598130841121	0.4715041128084606	2.5	6	0	4.225352112676056	4	0	0	2	0	1.245753114382786	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019765	Chromosome_7A	26030	17	432	35.32462543219362	0.5334632309456645	80.49598125934004	406	0.9359605911330049	86.94953391192543	58	0.9655172413793104	79.56855136733185	348	0.9310344827586207	9.377302873986736	31	0.06451612903225806	methylated (>=50%)	Q86XH1	Dynein regulatory complex subunit 11 (IQ and AAA domain-containing protein 1)	cilium movement [GO:0003341]; flagellated sperm motility [GO:0030317]; microtubule severing [GO:0051013]	hit with GO BP
GN018781	Chromosome_7A	675	1	40	49.333333333333336	0.976491862567812	0.45977011494252873	40	0	0.45977011494252873	40	0	NA	NA	NA	0.2533783783783784	70	0	unmethylated (<10%)	Q2KJC3	Macrophage-expressed gene 1 protein (Macrophage gene 1 protein) (Mpg-1) (Perforin-2) (P-2) [Cleaved into: Macrophage-expressed gene 1 protein, processed form]	antibacterial innate immune response [GO:0140367]; antigen processing and presentation of exogenous peptide antigen [GO:0002478]; antigen processing and presentation of exogenous peptide antigen via MHC class I [GO:0042590]; defense response to bacterium [GO:0042742]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; dendritic cell antigen processing and presentation [GO:0002468]	hit with GO BP
GN018782	Chromosome_7A	75575	10	1527	37.04796559708898	0.5948976962071957	1.153900465998265	1009	0	1.6129032258064515	23	0	1.1457199761821655	986	0	1.0931021485111194	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019766	Chromosome_7A	22638	11	320	36.924639985864474	0.4156616758530229	80.34727703235991	297	0.9393939393939394	88.30992297236067	48	1	79.11525518788558	249	0.927710843373494	7.30985498668245	56	0.17857142857142858	methylated (>=50%)	P51650	Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH) (EC 1.2.1.24) (Aldehyde dehydrogenase family 5 member A1) (NAD(+)-dependent succinic semialdehyde dehydrogenase)	central nervous system development [GO:0007417]; GABA catabolic process [GO:0009450]; GABA shunt [GO:0006540]; glutamate metabolic process [GO:0006536]; post-embryonic development [GO:0009791]; succinate metabolic process [GO:0006105]	hit with GO BP
GN019767	Chromosome_7A	835	2	19	37.125748502994014	0.6613447830255533	0.3541912632821724	19	0	0.13404825737265416	17	0	1.9801980198019802	2	0	0.4868050217781194	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018784	Chromosome_7A	8985	8	266	39.165275459098496	0.7742402596771529	0.7855297157622739	265	0	0.8935409752361502	115	0	0.7120527961097604	150	0	0.5390835579514824	84	0	unmethylated (<10%)	Q2PZL6	Protocadherin Fat 4 (FAT tumor suppressor homolog 4) (Fat-like cadherin protein FAT-J)	axonogenesis [GO:0007409]; branching involved in ureteric bud morphogenesis [GO:0001658]; cell-cell adhesion mediated by cadherin [GO:0044331]; cerebral cortex development [GO:0021987]; condensed mesenchymal cell proliferation [GO:0072137]; digestive tract development [GO:0048565]; epithelial cell differentiation [GO:0030855]; establishment of planar polarity [GO:0001736]; fibroblast growth factor receptor signaling pathway [GO:0008543]; heart morphogenesis [GO:0003007]; heterophilic cell-cell adhesion [GO:0007157]; hippo signaling [GO:0035329]; homophilic cell-cell adhesion [GO:0007156]; inner ear receptor cell stereocilium organization [GO:0060122]; kidney development [GO:0001822]; nephron development [GO:0072006]; neurogenesis [GO:0022008]; Notch signaling pathway [GO:0007219]; ossification involved in bone maturation [GO:0043931]; plasma membrane organization [GO:0007009]; regulation of metanephric nephron tubule epithelial cell differentiation [GO:0072307]	hit with GO BP
GN010677	Chromosome_7A	1153	1	31	45.96704249783174	0.5155860079336458	0.47393364928909953	31	0	0.47393364928909953	31	0	NA	NA	NA	0.5137614678899083	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012466	Chromosome_7A	436	1	12	44.4954128440367	0.586218487394958	5.555555555555555	12	0	5.555555555555555	12	0	NA	NA	NA	0.7941760423560555	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019768	Chromosome_7A	2204	4	76	37.74954627949183	0.9748182807525999	0.5652759084791387	76	0	0.41916167664670656	34	0	0.684596577017115	42	0	0.6134969325153374	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019769	Chromosome_7A	10215	7	201	34.909446891825745	0.6458844513230909	2.0738443647640277	201	0	1.3875748975086724	62	0	2.378287632904309	139	0	0.9651945013161743	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011490	Chromosome_7A	471	1	19	40.97664543524416	0.9668323249783924	1.198257080610022	19	0	1.198257080610022	19	0	NA	NA	NA	1.3721413721413722	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019770	Chromosome_7A	6538	9	134	33.741205261547876	0.7203708698140389	4.664723032069971	134	0	9.726962457337883	20	0	3.781450052106595	114	0	0.872262066291917	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019771	Chromosome_7A	21502	12	485	35.37345363222026	0.7235870704953531	1.232852147404286	482	0	1.3255360623781676	57	0	1.2208094828022897	425	0	2.388059701492537	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019772	Chromosome_7A	4109	4	137	37.843757605256755	0.9347164798671648	0.7144072121109032	135	0	0.5981511691136487	64	0	0.7673267326732673	71	0	0.405295865982167	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019773	Chromosome_7A	384	1	11	40.625	0.7431386347642506	0.9025270758122743	11	0	0.9025270758122743	11	0	NA	NA	NA	0.3516483516483517	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018778	Chromosome_7A	351	1	13	43.58974358974359	0.7797334244702666	0.5163511187607573	13	0	0.5163511187607573	13	0	NA	NA	NA	0.49931911030413073	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019975	Chromosome_7A	1608	5	14	34.32835820895522	0.2959146117040854	10.11787819253438	14	0	12.098765432098766	11	0	2.4038461538461537	3	0	7.1404513304142805	64	0.15625	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016565	Chromosome_7A	663	2	3	33.18250377073907	0.17410714285714285	6.015037593984962	3	0	6.015037593984962	3	0	NA	NA	NA	5.914893617021277	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019774	Chromosome_7A	29192	19	361	35.701562071800495	0.39074750067863395	90.24867162592986	352	0.9857954545454546	88.13286036762335	57	0.9649122807017544	90.56991774383079	295	0.9898305084745763	0.7482993197278912	42	0	methylated (>=50%)	Q9Z1J2	Serine/threonine-protein kinase Nek4 (EC 2.7.11.1) (Never in mitosis A-related kinase 4) (NimA-related protein kinase 4) (Serine/threonine-protein kinase 2)	DNA damage response [GO:0006974]; intracellular signal transduction [GO:0035556]; mitotic cell cycle [GO:0000278]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of DNA-templated transcription [GO:0045893]; protein phosphorylation [GO:0006468]; regulation of cellular senescence [GO:2000772]; regulation of monoatomic cation transmembrane transport [GO:1904062]	hit with GO BP
GN019775	Chromosome_7A	21168	21	268	34.31594860166289	0.4302230203606183	89.54228736184527	266	0.981203007518797	91.51442307692308	79	1	88.88532991672005	187	0.9732620320855615	42.36874236874237	26	0.34615384615384615	methylated (>=50%)	A0FKN5	Prestin (Solute carrier family 26 member 5)	NA	hit, no GO BP
GN019776	Chromosome_7A	3827	4	127	40.8413901228116	0.7983891898640191	0.6106248727864848	127	0	0.6777746399322225	99	0	0.43731778425655976	28	0	0.5666486778197517	63	0	unmethylated (<10%)	Q9SZJ2	Glycine-rich domain-containing protein 2 (AtGRDP2)	cellular response to osmotic stress [GO:0071470]; regulation of auxin mediated signaling pathway [GO:0010928]; regulation of photoperiodism, flowering [GO:2000028]	hit with GO BP
GN019777	Chromosome_7A	1848	3	67	39.33982683982684	0.9374602501589994	0.603448275862069	67	0	0.6637168141592921	62	0	0.17482517482517482	5	0	0.4681647940074906	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019778	Chromosome_7A	14611	7	251	35.74703990144412	0.5377417363521326	85.35365423090502	251	0.9362549800796812	82.11243611584327	32	0.875	85.59418457648546	219	0.9452054794520548	42.98664122137404	38	0.5263157894736842	methylated (>=50%)	Q6DCQ0	Serine/threonine-protein phosphatase 4 regulatory subunit 2-B	NA	hit, no GO BP
GN018770	Chromosome_7A	10094	6	186	36.001585100059444	0.5716039358348944	66.5337779066396	168	0.8511904761904762	80.74454428754814	34	0.9705882352941176	64.7246282072234	134	0.8208955223880597	70.09694258016405	26	0.8846153846153846	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018771	Chromosome_7A	2067	1	74	47.508466376390906	0.634562011242714	79.44186046511628	74	0.8243243243243243	79.44186046511628	74	0.8243243243243243	NA	NA	NA	21.656050955414013	17	0.17647058823529413	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018772	Chromosome_7A	24875	15	368	37.061306532663316	0.4319262277175091	56.7539202370663	351	0.7834757834757835	70.02286055064108	143	0.951048951048951	50.77680770091784	208	0.6682692307692307	45.714285714285715	32	0.4375	methylated (>=50%)	P26183	Actin (EC 3.6.4.-)	NA	hit, no GO BP
GN018773	Chromosome_7A	1185	1	51	41.687763713080166	0.9958803658235149	0.7383100902379	51	0	0.7383100902379	51	0	NA	NA	NA	0.6964596633778294	58	0	unmethylated (<10%)	O70212	5-hydroxytryptamine receptor 3A (5-HT3-A) (5-HT3A) (5-hydroxytryptamine receptor 3) (5-HT-3) (5-HT3R) (Serotonin receptor 3A) (Serotonin-gated ion channel receptor)	monoatomic cation transport [GO:0006812]	hit with GO BP
GN019779	Chromosome_7A	345	1	10	42.31884057971015	0.705810147299509	1.078582434514638	10	0	1.078582434514638	10	0	NA	NA	NA	1.2249897917517354	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019780	Chromosome_7A	300	1	13	47	0.7894736842105263	1.2618296529968454	13	0	1.2618296529968454	13	0	NA	NA	NA	4.668470906630582	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018761	Chromosome_7A	1326	2	56	40.42232277526395	1.0339901134860405	0.43789808917197454	56	0	0.31446540880503143	14	0	0.5134788189987163	42	0	1.6895122728721708	51	0	unmethylated (<10%)	L7N6F8	Major mite allergen Der p 23 (Major house dust mite allergen Der p 23) (Major HDM allergen Der p 23) (Peritrophin-like protein Der p 23) (allergen Der p 23)	NA	hit, no GO BP
GN018762	Chromosome_7A	12242	18	338	37.17529815389642	0.7991849379625767	1.7353995901639345	334	0	2.0110957004160888	74	0	1.6729500471253533	260	0	0.9551800146950772	35	0	unmethylated (<10%)	Q8IW92	Beta-galactosidase-1-like protein 2 (EC 3.2.1.23)	galactose catabolic process [GO:0019388]	hit with GO BP
GN018763	Chromosome_7A	5814	4	98	36.22291021671827	0.5152651874145403	66.4459161147903	98	0.7551020408163265	78.17836812144212	13	0.8461538461538461	65.1863923405989	85	0.7411764705882353	1.6550987720234918	52	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018764	Chromosome_7A	8432	7	150	36.49193548387097	0.539173642218558	86.24181669394436	146	0.9794520547945206	90.84429824561404	35	0.9714285714285714	85.18611670020121	111	0.9819819819819819	88.38599487617421	24	1	methylated (>=50%)	O60381	HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1)	regulation of cell cycle [GO:0051726]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019782	Chromosome_7A	32059	15	786	36.06475560684987	0.7549879836807806	0.7902279606761137	782	0	1.323076923076923	63	0	0.7394149232710308	719	0	0.5532503457814661	42	0	unmethylated (<10%)	P42893	Endothelin-converting enzyme 1 (ECE-1) (EC 3.4.24.71)	axon guidance [GO:0007411]; axonogenesis involved in innervation [GO:0060385]; blood vessel diameter maintenance [GO:0097746]; bradykinin catabolic process [GO:0010815]; calcitonin catabolic process [GO:0010816]; ear development [GO:0043583]; embryonic digit morphogenesis [GO:0042733]; embryonic heart tube development [GO:0035050]; endothelin maturation [GO:0034959]; gene expression [GO:0010467]; heart development [GO:0007507]; hormone catabolic process [GO:0042447]; neuron projection development [GO:0031175]; peptide hormone processing [GO:0016486]; pharyngeal system development [GO:0060037]; positive regulation of cAMP/PKA signal transduction [GO:0141163]; positive regulation of cardiac muscle hypertrophy [GO:0010613]; positive regulation of G protein-coupled receptor signaling pathway [GO:0045745]; positive regulation of receptor recycling [GO:0001921]; protein processing [GO:0016485]; regulation of blood pressure [GO:0008217]; regulation of ERK1 and ERK2 cascade [GO:0070372]; response to cadmium ion [GO:0046686]; response to hypoxia [GO:0001666]; response to muscle stretch [GO:0035994]; response to xenobiotic stimulus [GO:0009410]; semaphorin-plexin signaling pathway [GO:0071526]; substance P catabolic process [GO:0010814]; sympathetic neuron axon guidance [GO:0097492]	hit with GO BP
GN019783	Chromosome_7A	15070	14	414	36.85467816854678	0.8097308178255562	1.3295792272798372	414	0	0.8678881388621023	40	0	1.385559777842736	374	0	0.6092607636068237	56	0	unmethylated (<10%)	Q6NT16	MFS-type transporter SLC18B1 (Solute carrier family 18 member B1) (Vesicular polyamine transporter) (VPAT)	serotonin uptake [GO:0051610]; spermidine transport [GO:0015848]; spermine transport [GO:0000296]	hit with GO BP
GN019784	Chromosome_7A	492	1	6	38.61788617886179	0.34389561975768873	1.4861995753715498	6	0	1.4861995753715498	6	0	NA	NA	NA	0.6373117033603708	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019785	Chromosome_7A	1165	2	51	45.836909871244636	0.8386263550135501	94.34447300771208	51	1	94.58350430857612	47	1	92.3076923076923	4	1	27.588757396449704	22	0.22727272727272727	methylated (>=50%)	Q641K5	NUAK family SNF1-like kinase 1 (EC 2.7.11.1) (AMPK-related protein kinase 5) (Omphalocele kinase 1)	protein phosphorylation [GO:0006468]; regulation of cell adhesion [GO:0030155]; regulation of cellular senescence [GO:2000772]	hit with GO BP
GN019786	Chromosome_7A	3182	4	56	40.79195474544312	0.4231212170861264	90.9967845659164	45	1	93.00567107750473	14	1	90.45431342521695	31	1	91.95068890500363	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN018766	Chromosome_7A	9563	8	187	41.76513646345289	0.44868461725287584	93.34260944022263	184	0.9782608695652174	96.16199047114875	93	1	91.42857142857143	91	0.9560439560439561	87.93490460157126	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019787	Chromosome_7A	3443	5	68	36.33459192564624	0.602325701054798	75.114540631782	68	0.9264705882352942	85.06493506493507	11	0.9090909090909091	73.37864627584254	57	0.9298245614035088	75.98961713173264	30	0.8	methylated (>=50%)	Q6GLR7	Calcium-dependent secretion activator 1 (Calcium-dependent activator protein for secretion 1) (CAPS-1)	dense core granule exocytosis [GO:1990504]; exocytosis [GO:0006887]; positive regulation of exocytosis [GO:0045921]; synaptic vesicle exocytosis [GO:0016079]	hit with GO BP
GN019788	Chromosome_7A	2048	4	61	39.892578125	0.7497239425800567	0.8695652173913043	61	0	0.9394572025052192	54	0	0.37174721189591076	7	0	0.6702758442897654	61	0	unmethylated (<10%)	P22680	Cytochrome P450 7A1 (24-hydroxycholesterol 7-alpha-hydroxylase) (EC 1.14.14.26) (CYPVII) (Cholesterol 7-alpha-hydroxylase) (Cholesterol 7-alpha-monooxygenase) (EC 1.14.14.23)	bile acid biosynthetic process [GO:0006699]; cellular response to cholesterol [GO:0071397]; cellular response to glucose stimulus [GO:0071333]; cholesterol catabolic process [GO:0006707]; cholesterol homeostasis [GO:0042632]; negative regulation of collagen biosynthetic process [GO:0032966]; negative regulation of fatty acid biosynthetic process [GO:0045717]; positive regulation of cholesterol biosynthetic process [GO:0045542]; regulation of bile acid biosynthetic process [GO:0070857]; response to ethanol [GO:0045471]; sterol metabolic process [GO:0016125]	hit with GO BP
GN019789	Chromosome_7A	10600	16	14	39.886792452830186	0.03591972280817682	0.32362459546925565	8	0	0	3	0	0.5025125628140703	5	0	0.5373134328358209	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019790	Chromosome_7A	12444	6	278	35.63162970106075	0.7047799258759448	34.26878499804662	278	0.34172661870503596	0.8559201141226819	16	0	35.8668213140479	262	0.36259541984732824	0.9538344143456696	72	0	sparse (10-50%)	Q0VCH3	Cysteine-rich DPF motif domain-containing protein 1	NA	hit, no GO BP
GN019791	Chromosome_7A	918	1	50	42.37472766884532	1.2133869091678122	0.4275331338178709	50	0	0.4275331338178709	50	0	NA	NA	NA	0.6801007556675063	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019792	Chromosome_7A	19134	15	465	33.976168077767326	0.8420942344156475	0.9456855327956606	465	0	0.5716934487021014	163	0	1.0580046403712298	302	0	0.6751054852320675	64	0	unmethylated (<10%)	Q99758	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ABC-C transporter) (ATP-binding cassette sub-family A member 3) (ATP-binding cassette transporter 3) (ATP-binding cassette 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lipid transport [GO:0006869]; lung development [GO:0030324]; organelle assembly [GO:0070925]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; response to xenobiotic stimulus [GO:0009410]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN018759	Chromosome_7A	513	1	11	44.05458089668616	0.44985650510204084	0.09832841691248771	11	0	0.09832841691248771	11	0	NA	NA	NA	0.7269789983844911	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019794	Chromosome_7A	11855	6	156	31.412905946857865	0.599692011661921	77.48383740804043	156	0.8589743589743589	45.270270270270274	21	0.5238095238095238	80.17067868931647	135	0.9111111111111111	0.4573668735707285	72	0	methylated (>=50%)	Q6NRK9	Cyclin-Q (Cyclin-related protein FAM58A)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019795	Chromosome_7A	16882	4	222	37.667337993128776	0.3707320064891386	60.97060833902939	186	0.6989247311827957	63.38721011946592	33	0.7272727272727273	60.503059143439835	153	0.6928104575163399	0.5136986301369864	25	0	methylated (>=50%)	Q9CR40	Kelch-like protein 28 (BTB/POZ domain-containing protein 5)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]	hit with GO BP
GN019796	Chromosome_7A	3015	1	81	46.96517412935324	0.487587448888321	97.20538720538721	76	1	97.20538720538721	76	1	NA	NA	NA	95.82309582309583	36	1	methylated (>=50%)	Q5R5X3	Pumilio homolog 1	3'-UTR-mediated mRNA destabilization [GO:0061158]; adult locomotory behavior [GO:0008344]; miRNA processing [GO:0035196]; mRNA destabilization [GO:0061157]; positive regulation of miRNA-mediated gene silencing [GO:2000637]; positive regulation of RIG-I signaling pathway [GO:1900246]; post-transcriptional gene silencing [GO:0016441]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of cell cycle [GO:0051726]; regulation of chromosome segregation [GO:0051983]; regulation of mRNA stability [GO:0043488]; spermatogenesis [GO:0007283]; stem cell differentiation [GO:0048863]	hit with GO BP
GN018756	Chromosome_7A	6407	6	154	36.44451381301701	0.7297180165308815	93.1997631267272	154	0.9935064935064936	94.53125	17	1	93.05006587615283	137	0.9927007299270073	91.21495327102804	41	1	methylated (>=50%)	Q3UX61	N-alpha-acetyltransferase 11 (EC 2.3.1.255) (N-terminal acetyltransferase complex ARD1 subunit homolog B) (NatA catalytic subunit Naa11)	N-terminal protein amino acid acetylation [GO:0006474]	hit with GO BP
GN019797	Chromosome_7A	43788	20	762	36.105782406138665	0.5363407957294444	87.52266143351089	735	0.9891156462585035	93.48837209302326	138	0.9927536231884058	86.51371135146947	597	0.9882747068676717	95.33101045296168	37	0.972972972972973	methylated (>=50%)	Q460N5	Protein mono-ADP-ribosyltransferase PARP14 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2) (Poly [ADP-ribose] polymerase 14) (PARP-14)	NAD+ catabolic process [GO:0019677]; negative regulation of gene expression [GO:0010629]; negative regulation of type II interferon-mediated signaling pathway [GO:0060336]; negative regulation of tyrosine phosphorylation of STAT protein [GO:0042532]; positive regulation of interleukin-4-mediated signaling pathway [GO:1902216]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; protein poly-ADP-ribosylation [GO:0070212]	hit with GO BP
GN018755	Chromosome_7A	9546	3	147	37.21977791745233	0.44756008879363135	74.54385302629923	147	0.7482993197278912	85.68350490782859	90	0.8444444444444444	62.20159151193634	57	0.5964912280701754	1.5873015873015872	76	0	methylated (>=50%)	Q921C5	Protein bicaudal D homolog 2 (Bic-D 2)	centrosome localization [GO:0051642]; microtubule anchoring at microtubule organizing center [GO:0072393]; microtubule-based movement [GO:0007018]; minus-end-directed organelle transport along microtubule [GO:0072385]; protein localization to Golgi apparatus [GO:0034067]; regulation of microtubule cytoskeleton organization [GO:0070507]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN019798	Chromosome_7A	16966	9	221	36.319698219969354	0.39977494383191714	80.40889863700454	220	0.9227272727272727	92.00848656294201	59	0.9830508474576272	77.10807003421212	161	0.9006211180124224	56.13259668508287	29	0.7586206896551724	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019799	Chromosome_7A	16608	8	328	38.0659922928709	0.5452025509530043	86.15588013094938	315	0.9682539682539683	93.28426862925483	59	1	85.0255288110868	256	0.9609375	81.26510878323933	35	0.9714285714285714	methylated (>=50%)	Q04073	DNA-binding protein P3A2	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN019800	Chromosome_7A	1155	1	59	45.28138528138528	1.000513874614594	0.657501494321578	59	0	0.657501494321578	59	0	NA	NA	NA	0.8412197686645636	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019801	Chromosome_7A	20153	7	518	37.04659355927157	0.8138829982972725	4.165178252482675	490	0	1.1016949152542372	73	0	4.447218537879379	417	0	1.0072522159548751	71	0	unmethylated (<10%)	P41383	Tubulin alpha-2/alpha-4 chain (EC 3.6.5.-)	microtubule-based process [GO:0007017]	hit with GO BP
GN019802	Chromosome_7A	16772	12	278	37.48509420462676	0.47188476764516685	93.51414286692692	268	0.9925373134328358	95.27186761229315	74	1	93.06701030927834	194	0.9896907216494846	96.75925925925925	41	1	methylated (>=50%)	P49116	Nuclear receptor subfamily 2 group C member 2 (Orphan nuclear receptor TAK1) (Orphan nuclear receptor TR4) (Testicular receptor 4)	cell differentiation [GO:0030154]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nervous system development [GO:0007399]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of embryonic development [GO:0040019]; positive regulation of JNK cascade [GO:0046330]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of DNA-templated transcription [GO:0006355]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN019803	Chromosome_7A	25556	17	467	36.23415244952262	0.5635449051670524	87.44982235961795	385	0.9662337662337662	88.81004366812228	37	1	87.3242276094955	348	0.9626436781609196	78.4480145498636	43	1	methylated (>=50%)	Q5NDL3	EGF domain-specific O-linked N-acetylglucosamine transferase (EC 2.4.1.255) (Extracellular O-linked N-acetylglucosamine transferase)	protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN018747	Chromosome_7A	4202	4	117	37.76772965254641	0.781500262283616	0.8862414644776987	117	0	0.45190445448676564	29	0	1.0123734533183353	88	0	0.5005561735261401	80	0	unmethylated (<10%)	P46434	Glutathione S-transferase 1 (EC 2.5.1.18)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN018746	Chromosome_7A	1291	2	47	38.80712625871418	0.9670566109906923	0.8613617719442166	47	0	0.6557377049180327	5	0	0.8907641819034224	42	0	13.41612733951373	72	0	unmethylated (<10%)	P18426	S-crystallin SL11 (Major lens polypeptide)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN018745	Chromosome_7A	5964	4	168	35.2112676056338	0.9095424836601307	1.430054203667397	159	0	0.68762278978389	21	0	1.528812230497844	138	0	1.3556618819776713	56	0	unmethylated (<10%)	P18426	S-crystallin SL11 (Major lens polypeptide)	glutathione metabolic process [GO:0006749]	hit with GO BP
GN019804	Chromosome_7A	1285	3	11	42.72373540856031	0.19313275400338853	92.7765237020316	11	1	93.41772151898734	9	1	87.5	2	1	82.45681381957773	36	0.9722222222222222	methylated (>=50%)	Q8CJH3	Plexin-B1	inhibitory synapse assembly [GO:1904862]; negative regulation of cell adhesion [GO:0007162]; negative regulation of osteoblast proliferation [GO:0033689]; neuron projection morphogenesis [GO:0048812]; ossification involved in bone maturation [GO:0043931]; positive regulation of axonogenesis [GO:0050772]; positive regulation of GTPase activity [GO:0043547]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of Rho protein signal transduction [GO:0035025]; regulation of cell migration [GO:0030334]; regulation of cell shape [GO:0008360]; regulation of cytoskeleton organization [GO:0051493]; semaphorin-plexin signaling pathway [GO:0071526]; synapse assembly [GO:0007416]	hit with GO BP
GN018752	Chromosome_7A	3550	5	100	36.478873239436616	0.84676226731927	0.5342667649226235	100	0	0.6105834464043419	28	0	0.5058168942842691	72	0	0.6222775357809583	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018768	Chromosome_7A	1696	3	55	39.20990566037736	0.8447438962544375	0.6923076923076923	55	0	0.6567675613934895	50	0	1.0050251256281406	5	0	0.32562125107112255	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019805	Chromosome_7A	1886	2	22	35.52492046659597	0.3703683867570004	0.33076074972436603	22	0	0.7159904534606205	15	0	0	7	0	0	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019806	Chromosome_7A	345	1	1	40.869565217391305	0.0696969696969697	1.36986301369863	1	0	1.36986301369863	1	0	NA	NA	NA	0.5558202318564396	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019807	Chromosome_7A	444	1	14	42.567567567567565	0.6965486329000449	0.45045045045045046	14	0	0.45045045045045046	14	0	NA	NA	NA	4.170444242973708	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018744	Chromosome_7A	517	2	19	37.71760154738878	1.0366188265090757	0.5065856129685917	19	0	0.5567928730512249	18	0	0	1	0	1.084010840108401	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001861	Chromosome_7A	372	1	11	50.806451612903224	0.4639455782312925	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8955223880597015	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019808	Chromosome_7A	17354	6	318	36.49878990434482	0.5524379227443889	86.8269341634959	300	0.9533333333333334	86.70731707317073	13	1	86.83286941788697	287	0.9512195121951219	81.18609406952966	34	0.8529411764705882	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019809	Chromosome_7A	954	1	34	43.081761006289305	0.7736857170117355	0.746268656716418	12	0	0.746268656716418	12	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019810	Chromosome_7A	1007	2	13	35.749751737835155	0.40449264615004327	NA	0	NA	NA	NA	NA	NA	NA	NA	1.7964071856287425	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019811	Chromosome_7A	954	1	33	43.39622641509434	0.7403174603174603	0	24	0	0	24	0	NA	NA	NA	46.515892420537895	32	0.53125	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019812	Chromosome_7A	1071	1	47	44.25770308123249	0.8965695354801938	0.9107468123861566	47	0	0.9107468123861566	47	0	NA	NA	NA	1.045016077170418	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018740	Chromosome_7A	2579	3	40	37.80535091120589	0.4459314590033544	72.09302325581395	40	0.8	79.35086737548964	34	0.8823529411764706	45.73170731707317	6	0.3333333333333333	85.54641598119859	28	0.9285714285714286	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019813	Chromosome_7A	309	1	11	39.80582524271845	0.9035087719298246	0	11	0	0	11	0	NA	NA	NA	0.6940736785904965	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018704	Chromosome_7A	1786	2	18	38.297872340425535	0.28873979468110905	19.12751677852349	18	0.1111111111111111	19.3717277486911	17	0.11764705882352941	13.043478260869565	1	0	23.68421052631579	3	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN012421	Chromosome_7A	183	1	17	48.63387978142077	1.7302558398220245	16	11	0	16	11	0	NA	NA	NA	18.058252427184467	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019814	Chromosome_7A	897	1	27	39.576365663322186	0.7953694581280788	NA	0	NA	NA	NA	NA	NA	NA	NA	5.371900826446281	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019815	Chromosome_7A	576	1	25	43.75	0.9218950064020487	0	8	0	0	8	0	NA	NA	NA	5.607476635514018	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019816	Chromosome_7A	2659	5	19	33.283189168860474	0.25837450264404144	5.769230769230769	6	0	4.761904761904762	1	0	6.024096385542169	5	0	7.584830339321357	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019817	Chromosome_7A	1002	1	40	40.91816367265469	0.9538088098807739	45.76351191881048	37	0.2972972972972973	45.76351191881048	37	0.2972972972972973	NA	NA	NA	53.0441400304414	60	0.5666666666666667	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018729	Chromosome_7A	1550	2	55	43.16129032258065	0.7796780684104627	0.7275666936135813	37	0	0.44510385756676557	16	0	1.0657193605683837	21	0	0.31496062992125984	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019818	Chromosome_7A	7974	6	267	36.12992224730374	1.0266556722506728	1.1521187268111697	233	0	0.535077288941736	49	0	1.2733644859813085	184	0	21.219366407650927	51	0.058823529411764705	unmethylated (<10%)	Q9WYJ1	L-threonine ammonia-lyase (EC 4.3.1.19) (L-serine ammonia-lyase) (EC 4.3.1.17) (Threonine dehydratase)	L-serine catabolic process [GO:0006565]; L-threonine catabolic process [GO:0006567]	hit with GO BP
GN019819	Chromosome_7A	25709	8	335	35.57120074682018	0.4126230081542309	78.3610211772199	308	0.827922077922078	62.912912912912915	21	0.6190476190476191	78.92709766162311	287	0.8432055749128919	17.848164906988437	40	0.075	methylated (>=50%)	Q8R431	Monoglyceride lipase (MGL) (EC 3.1.1.23) (Monoacylglycerol lipase) (MAGL)	acylglycerol catabolic process [GO:0046464]; arachidonate metabolic process [GO:0019369]; long-term synaptic depression [GO:0060292]; monoacylglycerol catabolic process [GO:0052651]; positive regulation of vasoconstriction [GO:0045907]; regulation of axon extension [GO:0030516]; regulation of endocannabinoid signaling pathway [GO:2000124]; regulation of inflammatory response [GO:0050727]; regulation of retrograde trans-synaptic signaling by endocanabinoid [GO:0099178]; regulation of sensory perception of pain [GO:0051930]; regulation of signal transduction [GO:0009966]; response to ethanol [GO:0045471]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN019820	Chromosome_7A	2240	6	65	35	0.9485650998403857	0.41851948731362804	65	0	0.1951219512195122	23	0	0.5003573981415297	42	0	0.5370265686828717	73	0	unmethylated (<10%)	Q8R431	Monoglyceride lipase (MGL) (EC 3.1.1.23) (Monoacylglycerol lipase) (MAGL)	acylglycerol catabolic process [GO:0046464]; arachidonate metabolic process [GO:0019369]; long-term synaptic depression [GO:0060292]; monoacylglycerol catabolic process [GO:0052651]; positive regulation of vasoconstriction [GO:0045907]; regulation of axon extension [GO:0030516]; regulation of endocannabinoid signaling pathway [GO:2000124]; regulation of inflammatory response [GO:0050727]; regulation of retrograde trans-synaptic signaling by endocanabinoid [GO:0099178]; regulation of sensory perception of pain [GO:0051930]; regulation of signal transduction [GO:0009966]; response to ethanol [GO:0045471]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN016094	Chromosome_7A	620	1	22	39.67741935483871	0.9134132458313802	0.5923000987166831	12	0	0.5923000987166831	12	0	NA	NA	NA	0.708128078817734	42	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN016090	Chromosome_7A	1527	2	47	46.037982973149965	0.586865862035129	0.5681818181818182	47	0	0.5838198498748958	44	0	0	3	0	0.521557719054242	52	0	unmethylated (<10%)	Q16222	UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX) (Protein-pyrophosphorylation enzyme) (EC 2.7.4.-) (Sperm-associated antigen 2) (UDP-N-acetylgalactosamine pyrophosphorylase) (EC 2.7.7.83) (UDP-N-acetylglucosamine pyrophosphorylase) (EC 2.7.7.23)	antiviral innate immune response [GO:0140374]; positive regulation of type I interferon production [GO:0032481]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	hit with GO BP
GN019821	Chromosome_7A	756	1	41	46.2962962962963	1.0177304964539007	0.9389671361502347	41	0	0.9389671361502347	41	0	NA	NA	NA	0.4972214097689383	63	0	unmethylated (<10%)	Q8VCW8	Medium-chain acyl-CoA ligase ACSF2, mitochondrial (EC 6.2.1.2)	NA	hit, no GO BP
GN018725	Chromosome_7A	282	2	7	41.13475177304964	0.589605734767025	0.4098360655737705	7	0	0.4098360655737705	7	0	NA	NA	NA	0	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018726	Chromosome_7A	834	1	45	44.724220623501196	1.1106836342113051	0.5476951163852122	45	0	0.5476951163852122	45	0	NA	NA	NA	0.22509848058525606	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012960	Chromosome_7A	1251	1	42	40.92725819344524	0.8017395284962234	0.466977985323549	42	0	0.466977985323549	42	0	NA	NA	NA	1.1915400655347037	67	0	unmethylated (<10%)	Q7JK24	Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1) (Beta3Gal-T1) (Beta3GalT1) (EC 2.4.1.86) (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,3-galactosyltransferase 1)	glucosylceramide metabolic process [GO:0006678]; glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN012959	Chromosome_7A	14493	9	254	35.42399779203753	0.5590090237840123	93.07097036961613	253	1	94.6085672082718	24	1	92.95713035870516	229	1	93.16309719934102	33	1	methylated (>=50%)	Q5H7C0	Cell division cycle protein 20 homolog (p55CDC)	anaphase-promoting complex-dependent catabolic process [GO:0031145]; metaphase/anaphase transition of cell cycle [GO:0044784]; metaphase/anaphase transition of meiosis I [GO:1990949]; positive regulation of anaphase-promoting complex-dependent catabolic process [GO:1905786]; positive regulation of meiotic cell cycle process involved in oocyte maturation [GO:1904146]; positive regulation of synapse maturation [GO:0090129]; positive regulation of synaptic plasticity [GO:0031915]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]	hit with GO BP
GN019823	Chromosome_7A	1452	4	11	34.84848484848485	0.25065913370998116	81.30990415335464	11	0.9090909090909091	92.80575539568345	3	1	78.02874743326488	8	0.875	93.39061467283543	25	1	methylated (>=50%)	Q5F359	Trafficking protein particle complex subunit 5	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	hit with GO BP
GN018720	Chromosome_7A	3848	4	40	34.9012474012474	0.34345183373646676	0.4136504653567735	28	0	0	2	0	0.45714285714285713	26	0	0.8803885853066181	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018721	Chromosome_7A	926	1	19	42.76457883369331	0.473224131902418	0.6496318752706799	15	0	0.6496318752706799	15	0	NA	NA	NA	0.6029831799428753	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018734	Chromosome_7A	2211	2	32	43.057440072365445	0.31377418653847006	95.57632398753894	32	1	95.57632398753894	32	1	NA	NA	NA	62.14703637751208	35	0.7428571428571429	methylated (>=50%)	Q28DE6	Lysine-specific demethylase RSBN1L (EC 1.14.11.-) (Round spermatid basic protein 1-like)	NA	hit, no GO BP
GN019824	Chromosome_7A	282	1	16	46.45390070921986	1.0566744730679156	10.748792270531402	16	0	10.748792270531402	16	0	NA	NA	NA	0.8977556109725686	51	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018715	Chromosome_7A	420	1	24	47.142857142857146	1.0288863937940185	0.43478260869565216	24	0	0.43478260869565216	24	0	NA	NA	NA	0.73715733701912	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018716	Chromosome_7A	1195	3	44	39.07949790794979	0.9651248164464024	0.8771929824561403	44	0	0.8247422680412371	33	0	0.9584664536741214	11	0	0.4554865424430642	94	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018717	Chromosome_7A	195	1	6	51.794871794871796	0.49408783783783783	0	6	0	0	6	0	NA	NA	NA	0.9555009555009555	75	0	unmethylated (<10%)	Q17QH6	Collectin-11 (Collectin kidney protein 1) (CL-K1)	antimicrobial humoral response [GO:0019730]; complement activation, lectin pathway [GO:0001867]; developmental process [GO:0032502]; positive regulation of opsonization [GO:1903028]; proteolysis [GO:0006508]	hit with GO BP
GN018718	Chromosome_7A	696	1	38	43.96551724137931	1.1583234791748784	0.7190265486725663	38	0	0.7190265486725663	38	0	NA	NA	NA	0.3893805309734513	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019826	Chromosome_7A	35803	8	366	33.96642739435243	0.3678452572098821	70.83333333333333	341	0.6832844574780058	61.6562282533055	49	0.40816326530612246	71.61481481481482	292	0.7294520547945206	2.690863579474343	43	0	methylated (>=50%)	C3YWU0	Alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase)	fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	hit with GO BP
GN019827	Chromosome_7A	603	1	10	38.97180762852405	0.4377177700348432	1.0593220338983051	10	0	1.0593220338983051	10	0	NA	NA	NA	0.5736137667304015	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019828	Chromosome_7A	3709	3	43	35.69695335669992	0.36714318600368323	0.6289308176100629	41	0	0.6010016694490818	28	0	0.6660746003552398	13	0	1.4970059880239521	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019829	Chromosome_7A	645	1	25	45.116279069767444	0.7621230740145571	1.8590998043052838	25	0	1.8590998043052838	25	0	NA	NA	NA	0.6171315724512466	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019830	Chromosome_7A	2505	1	80	40.159680638722556	0.7922670936369567	3.8866930171278	61	0	3.8866930171278	61	0	NA	NA	NA	1.610738255033557	25	0	unmethylated (<10%)	Q8K9J1	Uncharacterized metal-dependent hydrolase BUsg_343 (EC 3.1.-.-)	NA	hit, no GO BP
GN019831	Chromosome_7A	2783	4	66	38.411785842615885	0.6664900758372946	94.39962031324157	66	1	95.33303126415949	36	1	93.37319382162431	30	1	94.50957963969117	34	1	methylated (>=50%)	O18404	3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (17-beta-hydroxysteroid dehydrogenase 10) (17-beta-HSD 10) (EC 1.1.1.51, EC 1.1.1.62) (3-hydroxyacyl-CoA dehydrogenase type II) (Hydroxysteroid dehydrogenase) (EC 1.1.1.-, EC 1.1.1.53) (Mitochondrial ribonuclease P protein 2) (Mitochondrial RNase P protein 2) (Scully protein) (Type II HADH)	acyl-CoA metabolic process [GO:0006637]; androgen metabolic process [GO:0008209]; ecdysone metabolic process [GO:0008205]; estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]; L-isoleucine catabolic process [GO:0006550]; mitochondrial polycistronic RNA processing [GO:0140040]; mitochondrial tRNA 5'-end processing [GO:0097745]; mitochondrial tRNA processing [GO:0090646]; steroid metabolic process [GO:0008202]	hit with GO BP
GN018711	Chromosome_7A	261	1	8	39.84674329501916	0.8645962732919255	26.163391933815927	8	0.125	26.163391933815927	8	0.125	NA	NA	NA	84.8899188876014	48	0.9791666666666666	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019833	Chromosome_7A	1296	1	7	36.80555555555556	0.1595048878261481	27.027027027027028	3	0	27.027027027027028	3	0	NA	NA	NA	27.360308285163775	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019834	Chromosome_7A	1368	1	64	52.63157894736842	0.6756389677737993	93.18066157760815	64	1	93.18066157760815	64	1	NA	NA	NA	81.18609406952966	30	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019835	Chromosome_7A	1826	2	76	46.60460021905805	0.7681186693972436	91.8765743073048	76	1	93.12977099236642	70	1	83.76470588235294	6	1	75.87939698492463	32	0.96875	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019836	Chromosome_7A	26142	11	513	36.1908040700788	0.6007108635357017	90.33508168242408	482	0.9688796680497925	89.61840628507295	35	0.9714285714285714	90.38044829668573	447	0.9686800894854586	1.6162310866574965	81	0	methylated (>=50%)	Q17QZ3	Sugar phosphate exchanger 3 (Solute carrier family 37 member 3)	xenobiotic transmembrane transport [GO:0006855]	hit with GO BP
GN019837	Chromosome_7A	12501	6	299	37.22902167826574	0.6953620318611256	0.977696303085854	299	0	0.3672612801678909	55	0	1.0817092794564633	244	0	0.5942275042444821	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019838	Chromosome_7A	15741	7	395	37.98360968172289	0.7377401926049605	0.8405084050840509	364	0	0.9045226130653267	50	0	0.8304334071496362	314	0	0.6818181818181818	58	0	unmethylated (<10%)	P02637	Sarcoplasmic calcium-binding protein (SCP)	NA	hit, no GO BP
GN018875	Chromosome_7A	300	1	9	46	0.5914567360350493	1.5789473684210527	9	0	1.5789473684210527	9	0	NA	NA	NA	0.42071197411003236	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019839	Chromosome_7A	486	1	17	41.76954732510288	0.8123893805309734	0.7109004739336493	17	0	0.7109004739336493	17	0	NA	NA	NA	4.597233523189585	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020005	Chromosome_7A	516	1	15	47.093023255813954	0.5247457627118645	0	8	0	0	8	0	NA	NA	NA	0	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018707	Chromosome_7A	12044	5	198	36.408170043175026	0.4963812868506143	0.7657164918602406	193	0.0051813471502590676	0.27744748315497425	25	0	0.860347211553234	168	0.005952380952380952	0.48674959437533805	49	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN019930	Chromosome_7A	570	1	18	39.29824561403509	0.8202750239846498	3	18	0	3	18	0	NA	NA	NA	0.9571788413098237	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019840	Chromosome_7A	876	1	12	43.60730593607306	0.35523114355231145	0.28328611898017	12	0	0.28328611898017	12	0	NA	NA	NA	0.7931262392597488	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019841	Chromosome_7A	32453	18	659	35.6361507410717	0.6463871547848427	1.894718289172199	655	0.0015267175572519084	0.6665721174301518	185	0	2.2155533325923455	470	0.002127659574468085	0.5889281507656066	89	0	unmethylated (<10%)	A0A0G2K1Q8	Phospholipid-transporting ATPase ABCA3 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 3) (Xenobiotic-transporting ATPase ABCA3) (EC 7.6.2.2) [Cleaved into: 150 Kda mature form]	lung development [GO:0030324]; phosphatidylcholine metabolic process [GO:0046470]; phosphatidylglycerol metabolic process [GO:0046471]; phospholipid homeostasis [GO:0055091]; phospholipid transport [GO:0015914]; positive regulation of cholesterol efflux [GO:0010875]; positive regulation of phospholipid efflux [GO:1902995]; positive regulation of phospholipid transport [GO:2001140]; positive regulation of protein homooligomerization [GO:0032464]; positive regulation of vesicle fusion [GO:0031340]; regulation of lipid biosynthetic process [GO:0046890]; regulation of lipid transport [GO:0032368]; regulation of phosphatidylcholine metabolic process [GO:0150172]; response to glucocorticoid [GO:0051384]; surfactant homeostasis [GO:0043129]; xenobiotic export from cell [GO:0046618]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]	hit with GO BP
GN019842	Chromosome_7A	1681	3	55	40.095181439619274	0.8148040433951124	2.7566807313642756	55	0	2.4571854058078926	49	0	3.6823935558112773	6	0	0.45004500450045004	34	0	unmethylated (<10%)	Q8K9J1	Uncharacterized metal-dependent hydrolase BUsg_343 (EC 3.1.-.-)	NA	hit, no GO BP
GN019843	Chromosome_7A	1218	1	20	41.37931034482759	0.3835978835978836	3.4482758620689653	20	0	3.4482758620689653	20	0	NA	NA	NA	1.9230769230769231	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019844	Chromosome_7A	1358	2	33	42.488954344624446	0.5392779783393502	9.179926560587516	24	0	7.6923076923076925	21	0	13.989637305699482	3	0	1.5960912052117264	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018699	Chromosome_7A	237	1	8	51.47679324894515	0.5337837837837838	4.166666666666667	8	0	4.166666666666667	8	0	NA	NA	NA	0.9323064450749898	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018698	Chromosome_7A	636	1	15	42.924528301886795	0.5120223271790468	16.033755274261605	15	0	16.033755274261605	15	0	NA	NA	NA	2.203295685984077	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN018697	Chromosome_7A	1377	3	17	32.89760348583878	0.4621535181236674	0.8450704225352113	17	0	0.9523809523809523	11	0	0.6060606060606061	6	0	0.4542701393095094	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019845	Chromosome_7A	2814	1	35	41.43567874911159	0.321060094860887	1.9230769230769231	9	0	1.9230769230769231	9	0	NA	NA	NA	0.3003003003003003	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019846	Chromosome_7A	636	1	14	41.666666666666664	0.507234818275037	12.452830188679245	14	0	12.452830188679245	14	0	NA	NA	NA	2.711624616835652	63	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019847	Chromosome_7A	1376	3	20	33.06686046511628	0.5390370979746935	0.7274762171236709	20	0	0.900163666121113	14	0	0.35398230088495575	6	0	0.3574620196604111	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018702	Chromosome_7A	1862	2	25	39.25886143931257	0.3676412516387875	0.3257328990228013	25	0	0.3508771929824561	24	0	0	1	0	0.5852231163130943	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019848	Chromosome_7A	648	1	23	44.29012345679013	0.7238465274405051	2.109300095877277	23	0	2.109300095877277	23	0	NA	NA	NA	0.3707136237256719	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019849	Chromosome_7A	384	1	8	48.177083333333336	0.3590462833099579	97.23502304147465	8	1	97.23502304147465	8	1	NA	NA	NA	61.904761904761905	21	0.6190476190476191	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019850	Chromosome_7A	661	2	21	42.96520423600605	0.6884050783574688	0.4608294930875576	21	0	0.4608294930875576	21	0	NA	NA	NA	0.6870229007633588	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018706	Chromosome_7A	613	1	29	46.492659053833606	0.8785707225462094	52.5383707201889	29	0.5517241379310345	52.5383707201889	29	0.5517241379310345	NA	NA	NA	86.84080827994086	35	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019851	Chromosome_7A	186	1	6	46.774193548387096	0.6078431372549019	0	6	0	0	6	0	NA	NA	NA	1.0727611940298507	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019852	Chromosome_7A	13630	4	264	37.60821716801174	0.5524996929124186	84.72164948453609	261	0.8199233716475096	53.78106821787414	50	0.52	89.34355004344735	211	0.8909952606635071	12.144622991347342	65	0.12307692307692308	methylated (>=50%)	P48148	Ras-like GTP-binding protein Rho1 (EC 3.6.5.2)	actin cytoskeleton organization [GO:0030036]; actin filament bundle assembly [GO:0051017]; actin filament organization [GO:0007015]; actin-mediated cell contraction [GO:0070252]; adherens junction maintenance [GO:0034334]; apical constriction [GO:0003383]; axon guidance [GO:0007411]; border follicle cell migration [GO:0007298]; cell elongation involved in imaginal disc-derived wing morphogenesis [GO:0090254]; cell migration [GO:0016477]; cell projection organization [GO:0030030]; cellularization [GO:0007349]; compound eye morphogenesis [GO:0001745]; cortical actin cytoskeleton organization [GO:0030866]; dendrite morphogenesis [GO:0048813]; dendrite self-avoidance [GO:0070593]; determination of left/right symmetry [GO:0007368]; dorsal closure [GO:0007391]; dorsal closure, leading edge cell differentiation [GO:0046663]; dorsal closure, spreading of leading edge cells [GO:0007395]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; establishment of planar polarity of embryonic epithelium [GO:0042249]; establishment of protein localization [GO:0045184]; establishment or maintenance of actin cytoskeleton polarity [GO:0030950]; gastrulation involving germ band extension [GO:0010004]; germ-band extension [GO:0007377]; glial cell migration [GO:0008347]; hemocyte migration [GO:0035099]; imaginal disc-derived leg morphogenesis [GO:0007480]; imaginal disc-derived wing hair organization [GO:0035317]; lumen formation, open tracheal system [GO:0035149]; maintenance of epithelial cell apical/basal polarity [GO:0045199]; melanization defense response [GO:0035006]; mitotic actomyosin contractile ring assembly [GO:1903475]; mitotic cytokinesis [GO:0000281]; mitotic cytokinesis, division site positioning [GO:1902408]; motor neuron axon guidance [GO:0008045]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; neuroblast proliferation [GO:0007405]; neuron projection morphogenesis [GO:0048812]; open tracheal system development [GO:0007424]; peripheral nervous system development [GO:0007422]; positive regulation of protein serine/threonine kinase activity [GO:0071902]; positive regulation of wound healing [GO:0090303]; posterior midgut invagination [GO:0007374]; protein localization involved in establishment of planar polarity [GO:0090251]; protein localization to adherens junction [GO:0071896]; pseudocleavage involved in syncytial blastoderm formation [GO:0030589]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of actomyosin structure organization [GO:0110020]; regulation of axonogenesis [GO:0050770]; regulation of cell migration [GO:0030334]; regulation of cytoskeleton organization [GO:0051493]; regulation of embryonic cell shape [GO:0016476]; regulation of filopodium assembly [GO:0051489]; regulation of locomotor rhythm [GO:1904059]; regulation of Malpighian tubule size [GO:0035298]; regulation of myoblast fusion [GO:1901739]; regulation of tube length, open tracheal system [GO:0035159]; response to wounding [GO:0009611]; salivary gland morphogenesis [GO:0007435]; small GTPase-mediated signal transduction [GO:0007264]; spiracle morphogenesis, open tracheal system [GO:0035277]; tracheal pit formation in open tracheal system [GO:0035202]; ventral furrow formation [GO:0007370]; wound healing [GO:0042060]	hit with GO BP
GN020424	Chromosome_8A	669	2	12	39.01345291479821	0.5046517475484034	3.392939018798716	11	0	3.974284044418469	9	0	1.2765957446808511	2	0	1.7079121645172535	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020425	Chromosome_8A	394	2	12	41.370558375634516	0.7422291993720566	3.119584055459272	12	0	3.119584055459272	12	0	NA	NA	NA	12.244897959183673	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020422	Chromosome_8A	189	1	13	51.32275132275132	1.0636363636363637	0.6600660066006601	13	0	0.6600660066006601	13	0	NA	NA	NA	0.5125815470643057	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020421	Chromosome_8A	279	1	14	42.29390681003584	1.1793478260869565	16.666666666666668	1	0	16.666666666666668	1	0	NA	NA	NA	7.312252964426878	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020420	Chromosome_8A	1966	4	54	32.756866734486266	1.0239287057666155	0.6094329623741388	54	0	0.6933333333333334	24	0	0.526592943654555	30	0	1.0896483407627537	29	0	unmethylated (<10%)	C4N147	Sodium/calcium exchanger regulatory protein 1 (ReP1-NCXSQ) (Fatty acid-binding protein 1) (Na(+)/Ca(2+) exchanger regulatory protein 1)	NA	hit, no GO BP
GN020435	Chromosome_8A	690	1	18	38.26086956521739	0.7142857142857143	1.55902004454343	18	0	1.55902004454343	18	0	NA	NA	NA	0.7137192704203014	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020429	Chromosome_8A	772	2	27	41.19170984455958	0.8549280177187154	0.1757469244288225	27	0	0	21	0	0.5	6	0	0.4153686396677051	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020428	Chromosome_8A	6856	5	205	37.38331388564761	0.8601195066007691	0.6488144390704259	205	0	0.4668534080298786	67	0	0.7103393843725335	138	0	1.1275773195876289	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020413	Chromosome_8A	561	1	15	48.84135472370767	0.4507472280250683	0.6234413965087282	15	0	0.6234413965087282	15	0	NA	NA	NA	0.39486673247778875	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020427	Chromosome_8A	303	1	8	43.56435643564357	0.5723730814639906	9.265734265734265	8	0	9.265734265734265	8	0	NA	NA	NA	6.508422664624809	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020414	Chromosome_8A	930	1	40	40.96774193548387	1.029501300714009	0.6933744221879815	40	0	0.6933744221879815	40	0	NA	NA	NA	1.021856372409878	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020417	Chromosome_8A	21890	11	409	37.02603928734582	0.5458721732565736	87.1641674476726	404	0.9801980198019802	90.3206106870229	66	0.9848484848484849	86.70129404916491	338	0.9792899408284024	4.947798456650022	42	0.047619047619047616	methylated (>=50%)	Q62172	RalA-binding protein 1 (RalBP1) (Dinitrophenyl S-glutathione ATPase) (DNP-SG ATPase) (EC 7.6.2.2, EC 7.6.2.3) (Ral-interacting protein 1)	doxorubicin transport [GO:1900753]; positive regulation of GTPase activity [GO:0043547]; positive regulation of mitochondrial fission [GO:0090141]; positive regulation of protein phosphorylation [GO:0001934]; receptor-mediated endocytosis [GO:0006898]; regulation of Cdc42 protein signal transduction [GO:0032489]; small GTPase-mediated signal transduction [GO:0007264]; transmembrane transport [GO:0055085]; xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]	hit with GO BP
GN020418	Chromosome_8A	372	1	25	50	1.0753931544865865	0.2564102564102564	25	0	0.2564102564102564	25	0	NA	NA	NA	0.6118881118881119	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020419	Chromosome_8A	1701	1	68	52.968841857730744	0.6373313938111611	0	19	0	0	19	0	NA	NA	NA	0.6481481481481481	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020412	Chromosome_8A	17605	8	478	36.15450156205623	0.831168951745287	2.726622227243626	469	0	0.9289980092899801	50	0	2.8347839974447018	419	0	0.970402717127608	44	0	unmethylated (<10%)	A0A163UT06	Histone-lysine N-methyltransferase set-17 (EC 2.1.1.-) (EC 2.1.1.364) (SET domain-containing protein 17)	NA	hit, no GO BP
GN020411	Chromosome_8A	8511	7	222	36.39995300199742	0.7874906223429972	0.7603406326034063	222	0	0.6032482598607889	52	0	0.8042547671552731	170	0	0.5949161709031909	62	0	unmethylated (<10%)	Q9NQW5	Histone-lysine N-methyltransferase PRDM7 (EC 2.1.1.-) (PR domain zinc finger protein 7) (PR domain-containing protein 7) ([histone H3]-lysine4 N-methyltransferase PRDM7)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN020410	Chromosome_8A	531	1	13	40.301318267419965	0.609375	1.520912547528517	13	0	1.520912547528517	13	0	NA	NA	NA	0.4652827487473157	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020375	Chromosome_8A	4251	5	52	33.027522935779814	0.4486042759586407	1.9238641015145312	52	0	2.4249422632794455	19	0	1.648700063411541	33	0	0.4837929366231253	75	0	unmethylated (<10%)	Q6P3Z3	Peroxynitrite isomerase THAP4 (EC 5.99.-.-) (Ferric nitrobindin) (Nb(III)) (THAP domain-containing protein 4)	cellular response to reactive nitrogen species [GO:1902170]; nitrate metabolic process [GO:0042126]	hit with GO BP
GN020376	Chromosome_8A	2987	6	37	34.08101774355541	0.4269038376112946	1.3777267508610793	37	0	1.4184397163120568	26	0	1.3245033112582782	11	0	6.163141993957704	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001691	Chromosome_8A	321	1	6	43.925233644859816	0.3932217231523071	0.9478672985781991	6	0	0.9478672985781991	6	0	NA	NA	NA	1.3236267372600927	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020004	Chromosome_8A	1380	1	32	53.333333333333336	0.3266296348345772	0	15	0	0	15	0	NA	NA	NA	1.863540727382026	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002098	Chromosome_8A	544	1	30	42.279411764705884	1.2765957446808511	0.5504587155963303	30	0	0.5504587155963303	30	0	NA	NA	NA	0.5707762557077626	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020377	Chromosome_8A	411	1	22	50.12165450121655	0.8526166902404526	NA	0	NA	NA	NA	NA	NA	NA	NA	4.437869822485207	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016250	Chromosome_8A	995	2	46	44.120603015075375	0.9525890775890776	3.0828516377649327	20	0	3.0828516377649327	20	0	NA	NA	NA	4.489795918367347	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020220	Chromosome_8A	786	1	35	43.00254452926209	0.9653647752394989	0.4291845493562232	11	0	0.4291845493562232	11	0	NA	NA	NA	3.700440528634361	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002401	Chromosome_8A	1912	4	56	47.80334728033473	0.512676622823188	11.475409836065573	18	0	10.33434650455927	15	0	13.836477987421384	3	0	2.630040911747516	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001826	Chromosome_8A	472	1	16	41.52542372881356	0.7870766023970818	0.9242144177449169	16	0	0.9242144177449169	16	0	NA	NA	NA	0.8665511265164645	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020378	Chromosome_8A	5537	13	89	34.007585335018966	0.5560491514713847	3.5101609923462656	89	0	1.4203284509542833	24	0	4.394366197183099	65	0	0.3796095444685466	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020379	Chromosome_8A	687	1	22	48.617176128093156	0.5483040087066933	48.86363636363637	21	0.47619047619047616	48.86363636363637	21	0.47619047619047616	NA	NA	NA	32.73577552611068	27	0.1111111111111111	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020380	Chromosome_8A	738	1	27	40.78590785907859	0.8819155528016287	0.8517887563884157	27	0	0.8517887563884157	27	0	NA	NA	NA	0.9215219976218787	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020381	Chromosome_8A	213	1	6	44.13145539906103	0.5795918367346938	2.717391304347826	6	0	2.717391304347826	6	0	NA	NA	NA	0.4870920603994155	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020408	Chromosome_8A	806	3	19	38.21339950372209	0.649669098930935	20.96247960848287	19	0	19.400187441424556	17	0	31.446540880503143	2	0	1.2039127163280663	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020407	Chromosome_8A	525	1	5	40	0.23948544840799196	0.6711409395973155	4	0	0.6711409395973155	4	0	NA	NA	NA	0.6457564575645757	42	0	NA	Q5AXT5	ATP-dependent DNA helicase PIF1 (EC 5.6.2.3) (DNA 5'-3' helicase PIF1) (DNA repair and recombination helicase PIF1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN020406	Chromosome_8A	1575	1	9	36.25396825396825	0.17423851316468766	0.5405405405405406	2	0	0.5405405405405406	2	0	NA	NA	NA	0.6195786864931846	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020405	Chromosome_8A	1266	4	49	39.33649289099526	1.0107208029197081	NA	0	NA	NA	NA	NA	NA	NA	NA	0	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020402	Chromosome_8A	1266	4	50	39.573459715639814	1.0185036202735318	2.7777777777777777	4	0	2.7777777777777777	4	0	NA	NA	NA	2.816901408450704	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020403	Chromosome_8A	652	2	23	39.11042944785276	0.9521269841269842	0.4878048780487805	8	0	0.6535947712418301	6	0	0	2	0	1.447661469933185	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020404	Chromosome_8A	1052	3	44	40.874524714828894	1.011008212475974	NA	0	NA	NA	NA	NA	NA	NA	NA	0.24509803921568626	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020401	Chromosome_8A	1052	2	43	40.5893536121673	1.0025709219858157	NA	0	NA	NA	NA	NA	NA	NA	NA	2.127659574468085	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020400	Chromosome_8A	652	2	23	38.80368098159509	0.964993564993565	0.30425963488843816	23	0	0.33444816053511706	21	0	0	2	0	0.8792048929663608	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020399	Chromosome_8A	279	1	2	40.50179211469534	0.17481203007518797	1.2987012987012987	2	0	1.2987012987012987	2	0	NA	NA	NA	0.5700123915737298	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020398	Chromosome_8A	927	3	23	34.41208198489752	0.8387490165224233	0.5036373810856184	23	0	0.47619047619047616	20	0	0.6309148264984227	3	0	0.8689607229753216	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011948	Chromosome_8A	3296	5	38	34.435679611650485	0.3892300425129901	1.6785022595222725	38	0	2.6470588235294117	20	0	0.9205983889528193	18	0	0.6162695152013147	68	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN020385	Chromosome_8A	390	1	23	48.717948717948715	0.9956709956709957	11.986681465038846	23	0	11.986681465038846	23	0	NA	NA	NA	0.5943536404160475	78	0	sparse (10-50%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN020369	Chromosome_8A	48784	27	1514	36.479173499508036	0.9375045187684254	0.6138210925116075	1322	0	0.7433195333082424	133	0	0.5962488668718001	1189	0	0.6043861163874978	62	0	unmethylated (<10%)	Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 (EC 2.3.2.27) (Mind bomb homolog 2) (RING-type E3 ubiquitin transferase MIB2)	protein ubiquitination [GO:0016567]	hit with GO BP
GN020371	Chromosome_8A	324	1	14	45.67901234567901	0.8936170212765957	0.3347680535628886	14	0	0.3347680535628886	14	0	NA	NA	NA	0.631578947368421	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020372	Chromosome_8A	1670	3	48	39.34131736526946	0.7437372425310819	54.66025255562237	48	0.8125	64.55598455598455	26	0.8846153846153846	48.3505662235352	22	0.7272727272727273	55.68106312292359	43	0.6976744186046512	methylated (>=50%)	P26039	Talin-1	actin cytoskeleton organization [GO:0030036]; cell-cell adhesion [GO:0098609]; cell-substrate junction assembly [GO:0007044]; cortical actin cytoskeleton organization [GO:0030866]; cortical microtubule organization [GO:0043622]; integrin activation [GO:0033622]; integrin-mediated signaling pathway [GO:0007229]	hit with GO BP
GN020374	Chromosome_8A	1119	1	62	45.93386952636283	1.0514207774494204	58.71330418488445	62	0.8870967741935484	58.71330418488445	62	0.8870967741935484	NA	NA	NA	47.89753504108265	38	0.4473684210526316	methylated (>=50%)	Q9N294	Beta-1,3-galactosyltransferase 5 (Beta-1,3-GalTase 5) (Beta3Gal-T5) (Beta3GalT5) (b3Gal-T5) (EC 2.4.1.-) (Beta-3-Gx-T5) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5)	protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN020373	Chromosome_8A	59128	28	800	36.92666756866459	0.40046757338987526	80.72922663596239	793	0.9319041614123581	84.36321914440256	142	0.9507042253521126	80.24734291116955	651	0.9278033794162827	1.1498516320474776	30	0	methylated (>=50%)	Q8IV35	Cilia- and flagella-associated protein 337 (WD repeat-containing protein 49)	NA	hit, no GO BP
GN013059	Chromosome_8A	1357	2	13	31.319086219602063	0.3906679068119408	9.052631578947368	13	0	8.302354399008674	8	0	10.032362459546926	5	0	5.791324736225088	58	0	unmethylated (<10%)	Q9H5L6	DNA transposase THAP9 (EC 2.7.7.-) (THAP domain-containing protein 9) (hTh9)	DNA integration [GO:0015074]; DNA recombination [GO:0006310]; DNA transposition [GO:0006313]	hit with GO BP
GN013058	Chromosome_8A	2811	7	34	33.6179295624333	0.42874830652179763	23.76586741889986	31	0	26.651349798966113	15	0	21.76681257461202	16	0	1.3066719461492773	54	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020368	Chromosome_8A	22189	7	268	35.86011086574429	0.37824099693038865	92.05148150767272	235	0.9957446808510638	94.85530546623794	35	0.9714285714285714	91.62525458248473	200	1	NA	NA	NA	methylated (>=50%)	A0JNC0	Tropomodulin-1 (Erythrocyte tropomodulin) (E-Tmod)	actin filament organization [GO:0007015]; lens fiber cell development [GO:0070307]; muscle contraction [GO:0006936]; myofibril assembly [GO:0030239]; pointed-end actin filament capping [GO:0051694]	hit with GO BP
GN015679	Chromosome_8A	258	1	13	41.08527131782946	1.2380952380952381	94.76117103235747	13	1	94.76117103235747	13	1	NA	NA	NA	59.69899665551839	31	0.5483870967741935	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002484	Chromosome_8A	228	1	6	46.92982456140351	0.6047745358090185	0	4	0	0	4	0	NA	NA	NA	71.55249775650613	66	0.7272727272727273	NA	NA	NA	NA	no Swiss-Prot hit
GN020367	Chromosome_8A	339	1	0	43.067846607669615	0	NA	0	NA	NA	NA	NA	NA	NA	NA	95.33468559837728	23	1	NA	NA	NA	NA	no Swiss-Prot hit
GN020366	Chromosome_8A	23875	9	446	36.661780104712044	0.557035648084356	87.86217117450907	431	0.9651972157772621	95.72147651006712	34	1	87.49903093263043	397	0.9622166246851386	70.57747582963157	50	0.7	methylated (>=50%)	Q9CY57	Chromatin target of PRMT1 protein (Friend of PRMT1 protein) (Small arginine- and glycine-rich protein) (SRAG)	chromatin remodeling [GO:0006338]; in utero embryonic development [GO:0001701]; mRNA export from nucleus [GO:0006406]; positive regulation of ATP-dependent activity [GO:0032781]; positive regulation of helicase activity [GO:0051096]	hit with GO BP
GN001497	Chromosome_8A	1734	2	40	42.56055363321799	0.5127863907556501	0.9503695881731784	40	0	1.0011123470522802	39	0	0	1	0	0.22865853658536586	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011939	Chromosome_8A	761	1	11	39.42181340341656	0.3787782805429864	10.891089108910892	5	0	10.891089108910892	5	0	NA	NA	NA	6.222222222222222	16	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020144	Chromosome_8A	5301	2	201	36.61573288058857	1.1469480768319935	0.5024011821204285	200	0	0.5241090146750524	24	0	0.5007551069072411	176	0	1.0770059235325795	36	0	unmethylated (<10%)	Q01177	Plasminogen [Cleaved into: Plasmin (EC 3.4.21.7); Plasmin heavy chain A; Plasmin light chain B; Angiostatin]	blood coagulation [GO:0007596]; collagen catabolic process [GO:0030574]; extracellular matrix disassembly [GO:0022617]; fibrinolysis [GO:0042730]; labyrinthine layer blood vessel development [GO:0060716]; mononuclear cell migration [GO:0071674]; muscle cell cellular homeostasis [GO:0046716]; myoblast differentiation [GO:0045445]; negative regulation of cell-substrate adhesion [GO:0010812]; negative regulation of fibrinolysis [GO:0051918]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of fibrinolysis [GO:0051919]; protein catabolic process [GO:0030163]; protein processing [GO:0016485]; proteolysis [GO:0006508]; tissue regeneration [GO:0042246]; trans-synaptic signaling by BDNF, modulating synaptic transmission [GO:0099183]; trophoblast giant cell differentiation [GO:0060707]	hit with GO BP
GN001632	Chromosome_8A	406	1	13	44.33497536945813	0.6854545454545454	0.5617977528089888	13	0	0.5617977528089888	13	0	NA	NA	NA	0.39254170755642787	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020363	Chromosome_8A	291	1	6	47.07903780068729	0.40870786516853935	0	6	0	0	6	0	NA	NA	NA	0.28901734104046245	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020364	Chromosome_8A	492	1	18	50	0.5863347457627118	1.0638297872340425	17	0	1.0638297872340425	17	0	NA	NA	NA	3.3980582524271843	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020365	Chromosome_8A	1134	2	24	44.35626102292769	0.4321371864083836	0.6779661016949152	24	0	0.7547169811320755	22	0	0	2	0	1.0878661087866108	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020353	Chromosome_8A	252	1	2	44.04761904761905	0.16524590163934427	66.83417085427136	2	1	66.83417085427136	2	1	NA	NA	NA	75.87261604893847	45	0.9777777777777777	NA	NA	NA	NA	no Swiss-Prot hit
GN020352	Chromosome_8A	198	1	8	56.56565656565657	0.5131195335276968	84.42906574394463	8	1	84.42906574394463	8	1	NA	NA	NA	79.38056125941137	90	0.9888888888888889	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020039	Chromosome_8A	156	1	6	54.48717948717949	0.52	70.67669172932331	6	1	70.67669172932331	6	1	NA	NA	NA	74.89760093622002	48	0.9791666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002832	Chromosome_8A	687	1	23	48.7627365356623	0.570145053041784	75.39503386004515	22	0.9545454545454546	75.39503386004515	22	0.9545454545454546	NA	NA	NA	75.77959430820466	40	0.85	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002976	Chromosome_8A	333	1	14	49.249249249249246	0.6933372992266508	72.88537549407114	14	0.9285714285714286	72.88537549407114	14	0.9285714285714286	NA	NA	NA	74.65087502209651	27	0.7407407407407407	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020351	Chromosome_8A	417	1	17	39.568345323741006	1.0434206652929054	0.24489795918367346	17	0	0.24489795918367346	17	0	NA	NA	NA	0.49052396878483834	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020350	Chromosome_8A	2069	2	30	34.89608506524891	0.47710921165908254	6.825106642291286	30	0	0.48602673147023084	16	0	13.202933985330073	14	0	0.6441834028040925	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020349	Chromosome_8A	3361	3	60	37.81612615293068	0.500560977789251	2.700309871624613	60	0	9.090909090909092	8	0	1.8546365914786966	52	0	6.658739595719382	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020348	Chromosome_8A	549	3	12	40.07285974499089	0.5612062356248403	0.2247191011235955	12	0	0.24630541871921183	11	0	0	1	0	0.9971509971509972	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020347	Chromosome_8A	651	1	45	64.20890937019969	0.6725206611570248	1.9801980198019802	17	0	1.9801980198019802	17	0	NA	NA	NA	0.5707762557077626	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016490	Chromosome_8A	1281	1	43	40.59328649492584	0.8183357846414405	11.956521739130435	16	0	11.956521739130435	16	0	NA	NA	NA	2.131782945736434	14	0	sparse (10-50%)	Q93075	3'-5' RNA nuclease TATDN2 (EC 3.1.13.-) (TatD DNase domain containing 2)	NA	hit, no GO BP
GN015882	Chromosome_8A	1049	1	35	40.41944709246902	0.8175603455954396	10	1	0	10	1	0	NA	NA	NA	2.118270079435128	18	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003699	Chromosome_8A	1569	2	26	41.87380497131931	0.37981118373275236	2.830188679245283	9	0	4.411764705882353	5	0	0	4	0	1.2833168805528135	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020346	Chromosome_8A	381	1	31	51.181102362204726	1.4864082557261515	0	1	0	0	1	0	NA	NA	NA	0.9090909090909091	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020344	Chromosome_8A	156	1	3	49.35897435897436	0.36	NA	0	NA	NA	NA	NA	NA	NA	NA	1.704035874439462	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020343	Chromosome_8A	372	1	3	39.24731182795699	0.21040723981900453	3.2388663967611335	3	0	3.2388663967611335	3	0	NA	NA	NA	3.2306311696081362	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020342	Chromosome_8A	387	1	12	47.02842377260982	0.5608695652173913	1.13314447592068	12	0	1.13314447592068	12	0	NA	NA	NA	1.0433648516465601	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020341	Chromosome_8A	333	1	8	48.048048048048045	0.4178823529411765	1.0101010101010102	8	0	1.0101010101010102	8	0	NA	NA	NA	0.13280212483399734	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018028	Chromosome_8A	405	1	14	41.72839506172839	0.8118556701030928	NA	0	NA	NA	NA	NA	NA	NA	NA	0	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018029	Chromosome_8A	382	2	6	35.07853403141361	0.5162162162162162	NA	0	NA	NA	NA	NA	NA	NA	NA	0	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018030	Chromosome_8A	264	1	24	55.303030303030305	1.1925465838509317	0	1	0	0	1	0	NA	NA	NA	0.7874015748031497	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018031	Chromosome_8A	408	1	15	38.970588235294116	0.9686609686609686	NA	0	NA	NA	NA	NA	NA	NA	NA	0.535475234270415	25	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020354	Chromosome_8A	456	1	21	53.728070175438596	0.6499253427446722	0	8	0	0	8	0	NA	NA	NA	2.099236641221374	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020145	Chromosome_8A	2521	3	71	34.70844902816343	0.9462913031985197	0.5553887721404983	71	0	0.6176016469377251	28	0	0.5297732570459843	43	0	0.5754475703324808	49	0	unmethylated (<10%)	Q16878	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)	L-cysteine catabolic process [GO:0019448]; lactation [GO:0007595]; response to amino acid [GO:0043200]; response to azide [GO:0097184]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to glucagon [GO:0033762]; response to glucocorticoid [GO:0051384]; taurine biosynthetic process [GO:0042412]	hit with GO BP
GN020340	Chromosome_8A	817	2	11	37.086903304773564	0.3916586768935762	0.18518518518518517	11	0	0.18518518518518517	11	0	NA	NA	NA	0.8903133903133903	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020339	Chromosome_8A	726	1	41	44.90358126721763	1.302783613445378	0.3702846563295533	41	0	0.3702846563295533	41	0	NA	NA	NA	0.7817451933234735	107	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020338	Chromosome_8A	2538	1	26	38.888888888888886	0.27762211283604693	5.851979345955249	12	0	5.851979345955249	12	0	NA	NA	NA	5.6105610561056105	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020337	Chromosome_8A	516	1	36	50.1937984496124	1.325531611245897	0.6114130434782609	36	0	0.6114130434782609	36	0	NA	NA	NA	0.4878048780487805	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020336	Chromosome_8A	381	1	31	51.181102362204726	1.4864082557261515	NA	0	NA	NA	NA	NA	NA	NA	NA	1.3888888888888888	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020355	Chromosome_8A	642	3	26	49.06542056074766	0.6940540540540541	0.43859649122807015	26	0	0.43859649122807015	26	0	NA	NA	NA	0.7069913589945012	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020356	Chromosome_8A	1078	5	33	46.567717996289424	0.5659512862529233	0.6734006734006734	33	0	0.554016620498615	28	0	1.183431952662722	5	0	0.697084917617237	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020357	Chromosome_8A	451	2	11	36.14190687361419	0.7471385542168675	1.1976047904191616	11	0	1.1686143572621035	10	0	1.4492753623188406	1	0	0.6483790523690773	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020359	Chromosome_8A	216	1	12	43.05555555555556	1.2307692307692308	11.648351648351648	12	0	11.648351648351648	12	0	NA	NA	NA	9.019118869492935	49	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020146	Chromosome_8A	15039	6	384	35.68056386727841	0.802312559209871	0.6623560952531147	331	0	0.8244994110718492	63	0	0.6216082881105082	268	0	0.45045045045045046	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020362	Chromosome_8A	408	1	15	38.970588235294116	0.9686609686609686	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7874015748031497	21	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020361	Chromosome_8A	192	1	20	59.375	1.411764705882353	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7547169811320755	26	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020360	Chromosome_8A	405	1	14	41.97530864197531	0.8007343595537354	NA	0	NA	NA	NA	NA	NA	NA	NA	0.410958904109589	24	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020320	Chromosome_8A	746	3	31	50.402144772117964	0.6680918676874188	0.40816326530612246	28	0	0.40816326530612246	28	0	NA	NA	NA	0.7596961215513794	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020321	Chromosome_8A	543	3	15	47.697974217311234	0.4856887298747764	0.8849557522123894	15	0	0.6535947712418301	14	0	3.0303030303030303	1	0	2.525252525252525	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020322	Chromosome_8A	300	1	7	47.333333333333336	0.417910447761194	1.2861736334405145	7	0	1.2861736334405145	7	0	NA	NA	NA	1.0452961672473868	6	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020335	Chromosome_8A	405	1	15	41.72839506172839	0.864153627311522	0.676818950930626	15	0	0.676818950930626	15	0	NA	NA	NA	0.5518763796909493	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020323	Chromosome_8A	1017	1	44	56.44051130776794	0.5624434389140271	0	6	0	0	6	0	NA	NA	NA	0.5625879043600562	42	0	unmethylated (<10%)	P57436	Uncharacterized metal-dependent hydrolase BU355 (EC 3.1.-.-)	NA	hit, no GO BP
GN020324	Chromosome_8A	315	1	16	57.77777777777778	0.6256206554121152	10	1	0	10	1	0	NA	NA	NA	0.42796005706134094	41	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020325	Chromosome_8A	306	1	12	54.57516339869281	0.5678935972780699	NA	0	NA	NA	NA	NA	NA	NA	NA	1.1764705882352942	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020326	Chromosome_8A	788	2	40	55.203045685279186	0.6696978710746612	10	1	0	10	1	0	NA	NA	NA	0.6309148264984227	45	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020327	Chromosome_8A	593	2	22	42.83305227655986	0.8129361914257228	0.8411214953271028	22	0	0.7936507936507936	21	0	1.6129032258064515	1	0	0.772115596735054	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020328	Chromosome_8A	327	1	3	51.681957186544345	0.1489071038251366	0	3	0	0	3	0	NA	NA	NA	3.12	55	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020329	Chromosome_8A	1082	2	31	37.98521256931608	0.8297546012269938	NA	0	NA	NA	NA	NA	NA	NA	NA	1.744186046511628	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020330	Chromosome_8A	626	2	9	39.456869009584665	0.37041420118343193	0.7518796992481203	9	0	0.7518796992481203	9	0	NA	NA	NA	10.9375	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002148	Chromosome_8A	368	1	20	50.54347826086956	0.8736942070275404	1.408450704225352	20	0	1.408450704225352	20	0	NA	NA	NA	0.9549071618037135	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003863	Chromosome_8A	1449	2	39	48.17115251897861	0.464938911514254	NA	0	NA	NA	NA	NA	NA	NA	NA	20.611916264090176	32	0.03125	NA	NA	NA	NA	no Swiss-Prot hit
GN002873	Chromosome_8A	423	1	12	45.39007092198582	0.5522794037645523	0.7092198581560284	12	0	0.7092198581560284	12	0	NA	NA	NA	0.9674922600619195	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001367	Chromosome_8A	3590	3	32	35.0974930362117	0.289679657871379	34.1047503045067	22	0.09090909090909091	13.675213675213675	12	0	42.24872231686542	10	0.2	26.016260162601625	8	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020319	Chromosome_8A	1083	1	53	41.735918744229	1.1248750661414546	0.5857740585774058	53	0	0.5857740585774058	53	0	NA	NA	NA	0.5076142131979695	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020314	Chromosome_8A	299	2	8	40.13377926421405	0.6797385620915033	1.1928429423459244	8	0	1.2376237623762376	7	0	1.0101010101010102	1	0	0.5492058779872346	56	0	unmethylated (<10%)	Q6L6Q5	Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase) (Invertebrate-type lysozyme)	NA	hit, no GO BP
GN020312	Chromosome_8A	411	1	19	48.661800486618006	0.7847452517334941	0	8	0	0	8	0	NA	NA	NA	0.7418397626112759	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020315	Chromosome_8A	709	2	27	40.76163610719323	0.9356304985337244	0.4774305555555556	27	0	0.45569620253164556	24	0	0.60790273556231	3	0	0.47226931460402033	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020316	Chromosome_8A	1080	3	24	43.611111111111114	0.4969896843962112	1.0221465076660987	24	0	1.09717868338558	13	0	0.9795191451469278	11	0	0.555247084952804	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020317	Chromosome_8A	299	2	9	40.468227424749166	0.75	0.32751091703056767	9	0	0.4418262150220913	8	0	0	1	0	0.6106022758812101	56	0	unmethylated (<10%)	Q6L6Q5	Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase) (Invertebrate-type lysozyme)	NA	hit, no GO BP
GN003184	Chromosome_8A	633	1	6	37.12480252764613	0.2752173913043478	16.822429906542055	3	0	16.822429906542055	3	0	NA	NA	NA	5.62390158172232	16	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020306	Chromosome_8A	5971	6	266	40.29475799698543	1.0976762894164496	0.7220216606498195	258	0	0.7295719844357976	62	0	0.7196447710917164	196	0	0.718336483931947	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020307	Chromosome_8A	4784	7	124	36.55936454849498	0.7813698630136986	0.7548224769359799	123	0	0.8322496749024707	59	0	0.6648534300392868	64	0	0.6300630063006301	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020303	Chromosome_8A	312	1	18	46.47435897435897	1.0725744843391902	0.6637168141592921	18	0	0.6637168141592921	18	0	NA	NA	NA	0.5756578947368421	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020302	Chromosome_8A	366	1	18	42.89617486338798	1.0701754385964912	0.7782101167315175	18	0	0.7782101167315175	18	0	NA	NA	NA	0.8910891089108911	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020301	Chromosome_8A	974	3	10	36.03696098562629	0.3169747461598542	0.8670520231213873	10	0	0	2	0	0.9803921568627451	8	0	1.3006885998469777	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020300	Chromosome_8A	525	1	7	44.95238095238095	0.2666908563134978	1.4326647564469914	7	0	1.4326647564469914	7	0	NA	NA	NA	8.546168958742633	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020299	Chromosome_8A	333	1	10	50.150150150150154	0.4780361757105943	2.336448598130841	10	0	2.336448598130841	10	0	NA	NA	NA	0.47716428084526247	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020293	Chromosome_8A	3804	1	153	52.33964248159832	0.5966171887813679	0.23603461841070023	47	0	0.23603461841070023	47	0	NA	NA	NA	0.9268795056642637	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020294	Chromosome_8A	831	1	32	51.985559566787	0.5797000348796651	0.5256241787122208	27	0	0.5256241787122208	27	0	NA	NA	NA	0.4140786749482402	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020295	Chromosome_8A	1023	1	41	52.199413489736074	0.5980494203869791	0.2824858757062147	26	0	0.2824858757062147	26	0	NA	NA	NA	0.5041411595246669	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020296	Chromosome_8A	2085	1	78	51.55875299760192	0.5711405954780752	0.5882352941176471	27	0	0.5882352941176471	27	0	NA	NA	NA	0.472212132219397	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002944	Chromosome_8A	1200	2	20	36.833333333333336	0.4915514592933948	0.3976143141153082	17	0	0.4149377593360996	15	0	0	2	0	23.15369261477046	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011617	Chromosome_8A	7361	5	98	33.378617035728844	0.479223493429243	1.0213345438039039	75	0	1.4970059880239521	5	0	0.9823182711198428	70	0	4.774535809018568	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020292	Chromosome_8A	20283	12	663	37.696593206133215	0.9206375906123593	1.134422196405385	644	0	0.5557180462123428	84	0	1.2109722598367316	560	0	0.6076564715414219	77	0	unmethylated (<10%)	O15484	Calpain-5 (EC 3.4.22.-) (Calpain htra-3) (New calpain 3) (nCL-3)	proteolysis [GO:0006508]; signal transduction [GO:0007165]	hit with GO BP
GN020291	Chromosome_8A	8271	10	232	38.13323660984162	0.7722689075630252	0.6214585998903308	226	0	0.5394190871369294	55	0	0.6446319737458978	171	0	0.6349206349206349	54	0	unmethylated (<10%)	Q96PH1	NADPH oxidase 5 (EC 1.-.-.-) (EC 1.6.3.-)	angiogenesis [GO:0001525]; apoptotic process [GO:0006915]; cytoskeleton-dependent cytokinesis [GO:0061640]; defense response [GO:0006952]; endothelial cell proliferation [GO:0001935]; positive regulation of cytokine production [GO:0001819]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; proton transmembrane transport [GO:1902600]; regulation of fusion of sperm to egg plasma membrane [GO:0043012]; superoxide anion generation [GO:0042554]	hit with GO BP
GN020271	Chromosome_8A	216	1	13	54.629629629629626	0.9369369369369369	0.6342494714587738	13	0	0.6342494714587738	13	0	NA	NA	NA	2.6764934057408842	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019931	Chromosome_8A	762	1	11	39.23884514435696	0.381520254893036	3.5714285714285716	4	0	3.5714285714285716	4	0	NA	NA	NA	8.968850698174007	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020272	Chromosome_8A	216	1	14	54.166666666666664	1.0216216216216216	0.22371364653243847	14	0	0.22371364653243847	14	0	NA	NA	NA	0.22958346999016072	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020273	Chromosome_8A	216	1	13	51.851851851851855	1.0588235294117647	0.38684719535783363	13	0	0.38684719535783363	13	0	NA	NA	NA	0.6062539885130823	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020274	Chromosome_8A	216	1	14	52.77777777777778	1.0338461538461539	0.3367003367003367	14	0	0.3367003367003367	14	0	NA	NA	NA	0.46017699115044247	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020275	Chromosome_8A	228	1	20	56.14035087719298	1.2476060191518468	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020276	Chromosome_8A	216	1	13	51.851851851851855	1.0419294990723562	0.5988023952095808	13	0	0.5988023952095808	13	0	NA	NA	NA	0.6012777151446824	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020277	Chromosome_8A	243	1	13	51.851851851851855	0.9310344827586207	0	13	0	0	13	0	NA	NA	NA	0.6142506142506142	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020278	Chromosome_8A	246	1	18	53.2520325203252	1.1441860465116278	0.19230769230769232	18	0	0.19230769230769232	18	0	NA	NA	NA	0.3452740612861459	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020000	Chromosome_8A	1959	6	32	40.888208269525265	0.3920597395774701	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020280	Chromosome_8A	2509	2	57	33.71861299322439	0.8135306866598784	0.5422153369481022	57	0	0.7164790174002047	20	0	0.43613707165109034	37	0	0.6153846153846154	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020281	Chromosome_8A	915	1	30	44.80874316939891	0.6927619624470018	0.3629764065335753	30	0	0.3629764065335753	30	0	NA	NA	NA	0.529567519858782	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020282	Chromosome_8A	4240	5	135	37.00471698113208	0.93393594282824	0.6161137440758294	126	0	0.5185825410544511	33	0	0.6379277015271603	93	0	0.5402331532556156	61	0	unmethylated (<10%)	Q9V4X2	Peptidoglycan-recognition protein SC2 (EC 3.5.1.28)	defense response to Gram-positive bacterium [GO:0050830]; immune response [GO:0006955]; innate immune response [GO:0045087]; negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria [GO:0002814]; negative regulation of peptidoglycan recognition protein signaling pathway [GO:0061060]; peptidoglycan catabolic process [GO:0009253]; Toll receptor ligand protein activation cascade [GO:0160032]	hit with GO BP
GN020283	Chromosome_8A	1755	1	64	40.91168091168091	0.8721783492906562	0.5598621877691645	64	0	0.5598621877691645	64	0	NA	NA	NA	0.8771929824561403	58	0	unmethylated (<10%)	Q9EQU3	Toll-like receptor 9 (CD antigen CD289)	activation of innate immune response [GO:0002218]; canonical NF-kappaB signal transduction [GO:0007249]; cellular response to chloroquine [GO:1902350]; cellular response to lipopolysaccharide [GO:0071222]; cellular response to metal ion [GO:0071248]; defense response to Gram-negative bacterium [GO:0050829]; defense response to virus [GO:0051607]; detection of molecule of bacterial origin [GO:0032490]; immune response [GO:0006955]; innate immune response [GO:0045087]; maintenance of gastrointestinal epithelium [GO:0030277]; male gonad development [GO:0008584]; microglial cell activation [GO:0001774]; MyD88-dependent toll-like receptor signaling pathway [GO:0002755]; negative regulation of ATPase-coupled calcium transmembrane transporter activity [GO:1901895]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]; positive regulation of autophagy [GO:0010508]; positive regulation of B cell activation [GO:0050871]; positive regulation of B cell proliferation [GO:0030890]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of chemokine production [GO:0032722]; positive regulation of cytokine production [GO:0001819]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of immunoglobulin production [GO:0002639]; positive regulation of inflammatory response [GO:0050729]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-10 production [GO:0032733]; positive regulation of interleukin-12 production [GO:0032735]; positive regulation of interleukin-18 production [GO:0032741]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of intestinal epithelial cell development [GO:1905300]; positive regulation of JNK cascade [GO:0046330]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; positive regulation of toll-like receptor 9 signaling pathway [GO:0034165]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; positive regulation of type I interferon production [GO:0032481]; positive regulation of type II interferon production [GO:0032729]; regulation of B cell activation [GO:0050864]; regulation of B cell differentiation [GO:0045577]; regulation of dendritic cell cytokine production [GO:0002730]; regulation of inflammatory response [GO:0050727]; regulation of protein phosphorylation [GO:0001932]; response to molecule of bacterial origin [GO:0002237]; response to virus [GO:0009615]; toll-like receptor 9 signaling pathway [GO:0034162]; toll-like receptor signaling pathway [GO:0002224]	hit with GO BP
GN020284	Chromosome_8A	10445	3	324	37.01292484442317	0.9095145643592456	1.0530346544131726	324	0	1.083815028901734	71	0	1.0464305092628479	253	0	2.385557704706641	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020285	Chromosome_8A	6690	9	240	39.92526158445441	0.9045613418335958	1.2802443035001174	238	0	0.6813627254509018	72	0	1.5284931051669712	166	0	10.878010878010878	71	0	unmethylated (<10%)	A8WQH2	Peroxidasin homolog (EC 1.11.2.-)	muscle organ development [GO:0007517]; regulation of axon guidance [GO:1902667]; response to oxidative stress [GO:0006979]	hit with GO BP
GN020286	Chromosome_8A	23734	7	320	37.01019634279936	0.40481985764720524	87.70423242067696	318	0.9276729559748428	97.46663034595478	90	1	85.19141775347076	228	0.8991228070175439	88.90814558058925	24	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020269	Chromosome_8A	243	1	12	42.79835390946502	1.08	0.3831417624521073	12	0	0.3831417624521073	12	0	NA	NA	NA	0.5461496450027308	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020268	Chromosome_8A	1918	3	74	39.520333680917624	0.9889353400222965	1.2163050624589087	74	0	0.6842619745845552	27	0	1.485884101040119	47	0	0.7658643326039387	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020267	Chromosome_8A	5858	7	189	38.545578695800614	0.868760279218089	0.6473240087851115	189	0	0.8895478131949592	58	0	0.5375440954140769	131	0	0.40878896269800713	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020266	Chromosome_8A	10217	8	328	38.30870118430067	0.8751065753846049	0.582724791620565	322	0	0.827300930713547	79	0	0.5161411411411412	243	0	0.39893617021276595	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020265	Chromosome_8A	879	2	38	44.141069397042095	0.9001536098310292	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q5VSE6	Potassium channel, subfamily K, member 13 (K2P13.1b) (Tandem pore domain halothane-inhibited potassium channel)	regulation of excitatory synapse pruning [GO:1905810]; regulation of NLRP3 inflammasome complex assembly [GO:1900225]; regulation of resting membrane potential [GO:0060075]	hit with GO BP
GN020255	Chromosome_8A	375	1	13	46.13333333333333	0.6515637530072174	1.6355140186915889	13	0	1.6355140186915889	13	0	NA	NA	NA	0.6546644844517185	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020256	Chromosome_8A	618	1	12	37.702265372168284	0.5500667556742324	0.7936507936507936	12	0	0.7936507936507936	12	0	NA	NA	NA	1.1591962905718702	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020257	Chromosome_8A	1216	4	15	32.07236842105263	0.47969703345255627	3.3333333333333335	4	0	0	2	0	4.285714285714286	2	0	3.7746806039488967	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020258	Chromosome_8A	23158	11	582	35.18438552552034	0.8125479320744365	1.1171563293434894	479	0	0.6633813495072024	84	0	1.1835139554865712	395	0	0.8383233532934131	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020260	Chromosome_8A	880	2	31	43.18181818181818	0.765947888589398	13.47414420975965	31	0	14.065040650406504	28	0	8.391608391608392	3	0	1.9975031210986267	39	0	sparse (10-50%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN020261	Chromosome_8A	1100	4	9	34.63636363636363	0.2741774675972084	1.1428571428571428	9	0	0.9090909090909091	8	0	5	1	0	2.2831050228310503	18	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020262	Chromosome_8A	852	2	20	33.80281690140845	0.8517019043334833	3.5283194057567315	20	0	1.3114754098360655	11	0	4.404145077720207	9	0	0.4489337822671156	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001013	Chromosome_8A	400	1	18	46.25	0.8486562942008486	0.6036217303822937	18	0	0.6036217303822937	18	0	NA	NA	NA	1.0381403746332656	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020264	Chromosome_8A	348	1	4	39.6551724137931	0.3	0.5649717514124294	4	0	0.5649717514124294	4	0	NA	NA	NA	0.4975124378109453	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN004147	Chromosome_8A	2512	9	24	34.91242038216561	0.3188323020783754	12.432847275518036	24	0	13.406795224977044	20	0	7.4766355140186915	4	0	1.6002723867892408	50	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020231	Chromosome_8A	1117	2	51	39.391226499552374	1.1772230373416543	0.52367941712204	51	0	0.5628517823639775	25	0	0.48672566371681414	26	0	0.19149751053236308	54	0	unmethylated (<10%)	Q15485	Ficolin-2 (37 kDa elastin-binding protein) (EBP-37) (Collagen/fibrinogen domain-containing protein 2) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; defense response to Gram-negative bacterium [GO:0050829]; defense response to Gram-positive bacterium [GO:0050830]; opsonization [GO:0008228]; positive regulation of opsonization [GO:1903028]; proteolysis [GO:0006508]; recognition of apoptotic cell [GO:0043654]	hit with GO BP
GN020232	Chromosome_8A	261	1	13	46.36015325670498	0.9755606670500288	0.7537688442211056	13	0	0.7537688442211056	13	0	NA	NA	NA	0.35046728971962615	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020233	Chromosome_8A	330	1	13	44.24242424242424	0.8105044398261855	0.4098360655737705	13	0	0.4098360655737705	13	0	NA	NA	NA	0.6279434850863422	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020230	Chromosome_8A	255	1	9	46.666666666666664	0.6834425253126861	0.67453625632377745	9	0	0.67453625632377745	9	0	NA	NA	NA	0.7142857142857143	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020235	Chromosome_8A	7502	4	201	35.697147427352704	0.8410478084205066	0.5207961760719126	201	0	0.3367003367003367	39	0	0.5528564248617859	162	0	0.4488330341113106	52	0	unmethylated (<10%)	Q14314	Fibroleukin (Fibrinogen-like protein 2) (pT49)	NA	hit, no GO BP
GN020238	Chromosome_8A	22362	10	587	36.329487523477326	0.7956984919335055	0.9831874938550782	585	0	0.42454650714010034	62	0	1.0350261442590072	523	0	0.49298445202882063	57	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN020239	Chromosome_8A	2368	3	73	35.17736486486486	1.0002430246149216	0.40290088638195004	72	0	0.4101161995898838	25	0	0.3998857469294487	47	0	0.5157437567861021	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020240	Chromosome_8A	204	1	8	43.13725490196079	0.8888888888888888	2.127659574468085	8	0	2.127659574468085	8	0	NA	NA	NA	0.6309148264984227	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020241	Chromosome_8A	4582	7	186	41.48843299869053	0.9461077844311377	0.5927682276229994	186	0	0.6775607811877242	155	0	0.3468208092485549	31	0	0.668693009118541	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020242	Chromosome_8A	348	1	11	41.95402298850575	0.7418604651162791	0.9259259259259259	11	0	0.9259259259259259	11	0	NA	NA	NA	3.5106768005790805	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020243	Chromosome_8A	2108	2	72	38.804554079696395	0.9122195442989284	0.4918032786885246	72	0	0.6339144215530903	17	0	0.454733360892931	55	0	0.431832202344232	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018841	Chromosome_8A	678	1	22	40.70796460176991	0.7939110070257611	3.3112582781456954	22	0	3.3112582781456954	22	0	NA	NA	NA	2.40750126710593	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018931	Chromosome_8A	318	1	5	40.56603773584906	0.38498789346246975	NA	0	NA	NA	NA	NA	NA	NA	NA	2.342786683107275	9	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020214	Chromosome_8A	264	1	11	52.27272727272727	0.66	0.6097560975609756	11	0	0.6097560975609756	11	0	NA	NA	NA	1.1494252873563218	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020456	Chromosome_8A	380	2	8	40.526315789473685	0.5127340192275257	0.6507592190889371	8	0	0.6693440428380187	7	0	0.5714285714285714	1	0	0.625229863920559	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020213	Chromosome_8A	525	2	13	42.095238095238095	0.5598851517637408	0.7407407407407407	13	0	0.7407407407407407	13	0	NA	NA	NA	0.7082152974504249	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020212	Chromosome_8A	1290	3	50	49.6124031007752	0.6298889637594117	7.119386637458927	37	0	5.9405940594059405	23	0	8.055009823182711	14	0	5.626406601650412	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020211	Chromosome_8A	1807	3	10	33.03818483674599	0.20453670794376655	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN002501	Chromosome_8A	673	2	19	39.524517087667164	0.7255035460992908	NA	0	NA	NA	NA	NA	NA	NA	NA	0.3678724708767627	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020218	Chromosome_8A	267	1	16	53.18352059925093	0.8612903225806452	1.075268817204301	16	0	1.075268817204301	16	0	NA	NA	NA	0.7299270072992701	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003615	Chromosome_8A	1475	1	20	37.6271186440678	0.3849868190953462	30.939226519337016	19	0	30.939226519337016	19	0	NA	NA	NA	1.649222962258167	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013071	Chromosome_8A	919	3	7	33.732317736670296	0.27276967435549526	NA	0	NA	NA	NA	NA	NA	NA	NA	6.081081081081081	14	0.07142857142857142	NA	NA	NA	NA	no Swiss-Prot hit
GN012897	Chromosome_8A	492	2	9	44.71544715447155	0.36643495531281034	50	2	0.5	50	2	0.5	NA	NA	NA	46.25	15	0.5333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN020187	Chromosome_8A	5743	2	187	36.77520459690057	0.9639434814453125	1.5425531914893618	187	0	0.3640776699029126	36	0	1.6875746714456392	151	0	50.51605504587156	44	0.3409090909090909	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020188	Chromosome_8A	4301	4	135	37.17740060451058	0.9093763801922637	0.8104738154613467	129	0	0.9015256588072122	33	0	0.7840772014475271	96	0	0.9252833680314596	70	0	unmethylated (<10%)	Q8BNX1	C-type lectin domain family 4 member G	immune response [GO:0006955]; negative regulation of T cell mediated immunity [GO:0002710]; negative regulation of T cell proliferation [GO:0042130]; positive regulation of viral life cycle [GO:1903902]; symbiont entry into host cell [GO:0046718]	hit with GO BP
GN020189	Chromosome_8A	2056	2	75	37.40272373540856	1.0430618125735622	0.3415883859948762	75	0	0.8321775312066574	18	0	0.2148997134670487	57	0	0.288421920065925	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020190	Chromosome_8A	719	2	33	45.618915159944365	0.9440951774629954	1.0043041606886658	33	0	1.1494252873563218	29	0	0.38022813688212925	4	0	0.2978723404255319	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020194	Chromosome_8A	4394	2	101	37.93809740555303	0.640035189431633	95.62944678379556	100	1	95.33255542590432	38	1	95.72781751401507	62	1	0.5556698909240585	58	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020192	Chromosome_8A	5362	8	191	40.04102946661693	0.8889951754393579	0.4912970241437395	191	0	0.697084917617237	115	0	0.3276209677419355	76	0	0.28606456885982834	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020193	Chromosome_8A	13007	14	227	36.08826016760206	0.5365339046497598	90.91380715926776	222	0.9864864864864865	93.67141659681475	50	0.98	90.32141892500225	172	0.9883720930232558	92.57425742574257	18	1	methylated (>=50%)	O88967	ATP-dependent zinc metalloprotease YME1L1 (EC 3.4.24.-) (EC 3.6.-.-) (ATP-dependent metalloprotease FtsH1) (YME1-like protein 1)	cell population proliferation [GO:0008283]; cellular response to starvation [GO:0009267]; mitochondrial protein catabolic process [GO:0035694]; mitochondrial protein processing [GO:0034982]; mitochondrion organization [GO:0007005]; negative regulation of apoptotic process [GO:0043066]; neuronal stem cell population maintenance [GO:0097150]; positive regulation of mitochondrial fusion [GO:0010636]; protein hexamerization [GO:0034214]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; regulation of stem cell division [GO:2000035]	hit with GO BP
GN003821	Chromosome_8A	206	1	7	44.1747572815534	0.6966183574879227	73.32382310984308	7	1	73.32382310984308	7	1	NA	NA	NA	74.04900816802801	41	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN013164	Chromosome_8A	200	1	11	44	1.198257080610022	74.34083601286174	11	1	74.34083601286174	11	1	NA	NA	NA	83.2552693208431	30	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001274	Chromosome_8A	546	1	15	43.40659340659341	0.5947712418300654	2.1231422505307855	15	0	2.1231422505307855	15	0	NA	NA	NA	0.5055976886962803	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001531	Chromosome_8A	212	1	5	45.283018867924525	0.5971830985915493	14.814814814814815	5	0	14.814814814814815	5	0	NA	NA	NA	1.2581344902386118	43	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN013388	Chromosome_8A	5299	5	76	34.06303076052085	0.49458530750393603	87.3811410459588	76	0.9078947368421053	66.71368124118477	12	0.5833333333333334	90.75823922562803	64	0.96875	0.6927263730826324	48	0	methylated (>=50%)	P61026	Ras-related protein Rab-10 (EC 3.6.5.2)	antigen processing and presentation [GO:0019882]; axonogenesis [GO:0007409]; cellular response to insulin stimulus [GO:0032869]; endocytic recycling [GO:0032456]; endoplasmic reticulum tubular network organization [GO:0071786]; endosomal transport [GO:0016197]; establishment of neuroblast polarity [GO:0045200]; establishment of protein localization to endoplasmic reticulum membrane [GO:0097051]; establishment of protein localization to membrane [GO:0090150]; exocytosis [GO:0006887]; Golgi to plasma membrane protein transport [GO:0043001]; Golgi to plasma membrane transport [GO:0006893]; negative regulation of motile cilium assembly [GO:1905504]; polarized epithelial cell differentiation [GO:0030859]; protein localization to basolateral plasma membrane [GO:1903361]; protein localization to plasma membrane [GO:0072659]; regulated exocytosis [GO:0045055]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN020195	Chromosome_8A	2500	4	41	31.36	0.6853070175438597	1.639344262295082	41	0	1.267427122940431	31	0	2.588996763754045	10	0	5.486725663716814	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020205	Chromosome_8A	300	1	16	52.333333333333336	0.7797270955165692	1.9157088122605364	15	0	1.9157088122605364	15	0	NA	NA	NA	1.6574585635359116	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003340	Chromosome_8A	310	1	12	45.483870967741936	0.7727461570419609	0.3683241252302026	13	0	0.3683241252302026	13	0	NA	NA	NA	1.053864168618267	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020196	Chromosome_8A	645	1	32	41.55038759689923	1.158769368964743	0.42643923240938164	32	0	0.42643923240938164	32	0	NA	NA	NA	0.6906077348066298	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002329	Chromosome_8A	6645	10	90	35.09405568096313	0.44147739352278365	2.549800796812749	89	0	4.379977246871444	52	0	0.9466865969108121	37	0	2.606310013717421	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011434	Chromosome_8A	2256	3	61	48.005319148936174	0.4693235841785405	0	6	0	0	6	0	NA	NA	NA	0.6341463414634146	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020197	Chromosome_8A	2587	3	59	36.5287978353305	0.6842258622699194	0.3352329869259135	56	0	0.15255530129672007	30	0	0.4784688995215311	26	0	0.5561735261401557	61	0	unmethylated (<10%)	Q16878	Cysteine dioxygenase type 1 (EC 1.13.11.20) (Cysteine dioxygenase type I) (CDO) (CDO-I)	L-cysteine catabolic process [GO:0019448]; lactation [GO:0007595]; response to amino acid [GO:0043200]; response to azide [GO:0097184]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to glucagon [GO:0033762]; response to glucocorticoid [GO:0051384]; taurine biosynthetic process [GO:0042412]	hit with GO BP
GN020198	Chromosome_8A	13041	11	175	37.76550878000153	0.3798876404494382	72.64921899244854	175	0.8285714285714286	68.05555555555556	32	0.75	73.4532636440987	143	0.8461538461538461	0.35842293906810035	33	0	methylated (>=50%)	Q96FB5	Methyltransferase-like protein 25B (Protein RRNAD1) (Ribosomal RNA adenine dimethylase domain-containing protein 1)	rRNA modification [GO:0000154]	hit with GO BP
GN003943	Chromosome_8A	897	1	25	40.468227424749166	0.7826678765880217	0.4287245444801715	25	0	0.4287245444801715	25	0	NA	NA	NA	0.5777563793933558	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003942	Chromosome_8A	945	1	26	38.51851851851852	0.7435765517658808	1.278538812785388	26	0	1.278538812785388	26	0	NA	NA	NA	0.6204756980351603	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003941	Chromosome_8A	5358	10	87	37.55132512131392	0.46152566655214644	49.568541780447845	87	0.5517241379310345	52.42128121606949	49	0.6326530612244898	46.68131868131868	38	0.4473684210526316	86.55296229802514	38	0.9736842105263158	sparse (10-50%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN001139	Chromosome_8A	250	1	17	47.2	1.2297453703703705	50.272892662219526	17	0.6470588235294118	50.272892662219526	17	0.6470588235294118	NA	NA	NA	78.05345798873307	48	0.9791666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003940	Chromosome_8A	1742	2	55	43.85763490241102	0.6589635131882114	73.13157894736842	55	0.9272727272727272	73.65897512735991	50	0.92	69.3304535637149	5	1	76.61463939720129	35	0.9714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003939	Chromosome_8A	333	1	4	45.945945945945944	0.2276923076923077	50.57251908396947	4	0.75	50.57251908396947	4	0.75	NA	NA	NA	53.58288770053476	28	0.5714285714285714	NA	NA	NA	NA	no Swiss-Prot hit
GN003938	Chromosome_8A	417	1	8	41.96642685851319	0.4420885237211768	64.04494382022472	8	0.875	64.04494382022472	8	0.875	NA	NA	NA	47.54168448054724	21	0.38095238095238093	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020182	Chromosome_8A	8300	4	251	36.7710843373494	0.8975458692770303	0.5367008681925809	251	0	0.48325466396943134	166	0	0.662778366914104	85	0	0.4985754985754986	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020180	Chromosome_8A	9536	12	142	34.102348993288594	0.5146108510822656	72.75353016688062	140	0.7785714285714286	73.44126765415088	45	0.8	72.44375484871993	95	0.7684210526315789	38.29183737787583	51	0.47058823529411764	methylated (>=50%)	Q8N6V9	Testis-expressed protein 9	NA	hit, no GO BP
GN020017	Chromosome_8A	2424	2	92	38.53135313531353	1.0232306315813622	0.4898169631348286	76	0	0.7246376811594203	40	0	0.42608980662078005	36	0	1.798330122029544	21	0	unmethylated (<10%)	Q95JJ0	Protein O-mannose kinase (POMK) (EC 2.7.1.183) (Protein kinase-like protein SgK196) (Sugen kinase 196)	carbohydrate phosphorylation [GO:0046835]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN020186	Chromosome_8A	1571	5	5	38.892425206874606	0.08458241805573502	NA	0	NA	NA	NA	NA	NA	NA	NA	9.002433090024331	8	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020254	Chromosome_8A	1060	1	28	37.35849056603774	0.75708491697064	0.7198560287942412	28	0	0.7198560287942412	28	0	NA	NA	NA	0.5944517833553501	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020173	Chromosome_8A	765	2	27	38.03921568627451	0.9756731223429381	0.4424778761061947	27	0	0.3448275862068966	22	0	0.7692307692307693	5	0	2.4796921761436512	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020174	Chromosome_8A	1055	2	51	40.947867298578196	1.15481198489011	0.42834890965732086	51	0	0.48672566371681414	46	0	0	5	0	0.5512679162072768	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020175	Chromosome_8A	604	2	27	40.397350993377486	1.0975166565717747	0.5890052356020943	27	0	0.4784688995215311	20	0	0.8281573498964804	7	0	0.43898156277436345	71	0	unmethylated (<10%)	Q5VWW1	Complement C1q-like protein 3 (C1q and tumor necrosis factor-related protein 13) (C1q/TNF-related protein 13)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN020176	Chromosome_8A	4048	4	106	38.14229249011858	0.720139634801289	0.4268292682926829	106	0	0.704225352112676	17	0	0.38004750593824227	89	0	0.4909365558912387	57	0	unmethylated (<10%)	Q9WTS8	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of interleukin-8 production [GO:0032757]	hit with GO BP
GN013335	Chromosome_8A	1403	1	15	37.704918032786885	0.30363583898427354	41.99790794979079	15	0.26666666666666666	41.99790794979079	15	0.26666666666666666	NA	NA	NA	33.83768913342504	18	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020166	Chromosome_8A	12235	9	331	35.529219452390684	0.8572639086281737	1.099759224311837	329	0	0.7600116924875767	87	0	1.1970534069981584	242	0	2.623732856290996	53	0	unmethylated (<10%)	Q9XTQ6	Tyramine beta-hydroxylase (EC 1.14.17.-) (Tyramine beta-monooxygenase) (TbetaM)	octopamine biosynthetic process [GO:0006589]	hit with GO BP
GN020168	Chromosome_8A	941	3	42	41.445270988310305	1.0394781831093343	0.5	33	0	0.30938466827088346	27	0	1.122334455667789	6	0	0.507292327203551	36	0	unmethylated (<10%)	Q5TZ24	DBH-like monooxygenase protein 1 homolog (EC 1.14.17.-)	NA	hit, no GO BP
GN001740	Chromosome_8A	807	1	28	42.37918215613383	0.775402354071583	0	2	0	0	2	0	NA	NA	NA	5.551601423487544	35	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020161	Chromosome_8A	2498	5	90	36.10888710968775	1.1430924815814762	0.6574548696233563	90	0	0.7712082262210797	19	0	0.6335939606362901	71	0	1.5070921985815602	25	0	unmethylated (<10%)	Q0IHV1	Inverted formin-2	actin cytoskeleton organization [GO:0030036]	hit with GO BP
GN020160	Chromosome_8A	4524	4	143	36.62687886825818	0.9425247165572523	0.5460218408736349	143	0	0.4992867332382311	28	0	0.554675118858954	115	0	0.8542713567839196	63	0	unmethylated (<10%)	Q5M8C6	Fibrinogen-like protein 1	adipose tissue development [GO:0060612]; blood coagulation [GO:0007596]; cholesterol metabolic process [GO:0008203]; hepatocyte proliferation [GO:0072574]; negative regulation of T cell activation [GO:0050868]; negative regulation of T cell receptor signaling pathway [GO:0050860]; regulation of glucose metabolic process [GO:0010906]; regulation of immune response [GO:0050776]; response to stilbenoid [GO:0035634]	hit with GO BP
GN020159	Chromosome_8A	8824	4	178	37.77198549410698	0.567497532261258	90.1730220057114	177	0.9830508474576272	96.20170268500327	31	1	89.28605838712785	146	0.9794520547945206	79.04290429042905	12	1	methylated (>=50%)	Q90683	Transcription factor 4 (TCF-4) (Class A helix-loop-helix transcription factor GE2)	positive regulation of neuron differentiation [GO:0045666]	hit with GO BP
GN020158	Chromosome_8A	80670	50	1492	35.37002603198215	0.5955832412310942	52.02888208899263	1449	0.5410628019323671	52.63004940424295	168	0.5178571428571429	51.974300452512566	1281	0.5441061670569868	0.8157211716722284	49	0	methylated (>=50%)	Q5SUV2	MYCBP-associated protein (AMAM-1) (AMY-1-binding protein 1) (AMAP-1)	acrosome assembly [GO:0001675]; chemical synaptic transmission [GO:0007268]; flagellated sperm motility [GO:0030317]; sperm flagellum assembly [GO:0120316]; spermatogenesis [GO:0007283]	hit with GO BP
GN020157	Chromosome_8A	992	2	44	41.12903225806452	1.0545287622913193	0.48999591670069415	44	0	0.5768222338751966	38	0	0.18450184501845018	6	0	0.7502679528403001	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020150	Chromosome_8A	32130	9	831	36.76626206037971	0.7653420817281232	0.804295419680035	778	0	0.4162330905306972	44	0	0.8213599341081724	734	0	0.43010752688172044	53	0	unmethylated (<10%)	D8VNS7	Ryncolin-1	complement activation, lectin pathway [GO:0001867]	hit with GO BP
GN020151	Chromosome_8A	186	1	8	45.69892473118279	0.8502857142857143	0.8	8	0	0.8	8	0	NA	NA	NA	1.2057877813504823	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020152	Chromosome_8A	1360	2	44	37.86764705882353	0.9071614820204961	0.6697362913352868	44	0	0.6389776357827476	19	0	0.6896551724137931	25	0	0.3913198150124511	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020153	Chromosome_8A	14514	8	292	36.84029213173488	0.5943328913091769	87.14829371763679	291	0.9484536082474226	95.7516339869281	40	1	86.03536954836892	251	0.9402390438247012	71.70263788968825	55	0.6	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020154	Chromosome_8A	18720	11	321	35.998931623931625	0.5345094619361078	90.32444188007634	320	0.959375	97.11637487126673	40	1	89.68381174413521	280	0.9535714285714286	42.916352675207236	48	0.4583333333333333	methylated (>=50%)	Q8TC07	TBC1 domain family member 15 (GTPase-activating protein RAB7) (GAP for RAB7) (Rab7-GAP)	regulation of GTPase activity [GO:0043087]	hit with GO BP
GN020155	Chromosome_8A	1341	2	34	37.360178970917225	0.7269451530612245	0.38699690402476783	34	0	0.3015075376884422	29	0	0.6734006734006734	5	0	11.197578901859057	55	0.05454545454545454	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001895	Chromosome_8A	636	1	24	44.339622641509436	0.7687348912167606	11.508553654743391	24	0	11.508553654743391	24	0	NA	NA	NA	1.2195121951219512	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020156	Chromosome_8A	29929	15	406	35.2634568478733	0.43819967460957565	88.79058656993719	382	0.9790575916230366	94.32299012693935	56	1	87.99696509863429	326	0.9754601226993865	76.1295590636908	45	0.8444444444444444	methylated (>=50%)	Q92122	Pyruvate kinase PKM (EC 2.7.1.40) (Cytosolic thyroid hormone-binding protein) (CTHBP)	cellular response to insulin stimulus [GO:0032869]; glycolytic process [GO:0006096]	hit with GO BP
GN020135	Chromosome_8A	10818	7	290	35.03420225550009	0.8766904169674228	1.1390391345847917	290	0	0.7582139848357203	64	0	1.2068060865002623	226	0	2.049689440993789	30	0	unmethylated (<10%)	Q708S3	Acid-sensing ion channel 4-B (ASIC4-B) (Acid-sensing ion channel 4.2) (Amiloride-sensitive cation channel 4-B) (ZASIC4.2)	response to steroid hormone [GO:0048545]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN003308	Chromosome_8A	321	1	11	44.54828660436137	0.7295454545454545	0	11	0	0	11	0	NA	NA	NA	1.0398613518197575	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020216	Chromosome_8A	191	1	8	53.92670157068063	0.6063492063492063	0.4098360655737705	8	0	0.4098360655737705	8	0	NA	NA	NA	0.3270111183780249	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020134	Chromosome_8A	235	1	10	54.46808510638298	0.6025641025641025	1.6326530612244898	10	0	1.6326530612244898	10	0	NA	NA	NA	0.9572072072072072	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020136	Chromosome_8A	1111	3	45	44.464446444644466	0.8279511128775835	0.8428657435279951	45	0	1.0223048327137547	35	0	0.5128205128205128	10	0	0.47343503419253025	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002158	Chromosome_8A	509	1	15	46.95481335952849	0.5351135407905803	0.9259259259259259	14	0	0.9259259259259259	14	0	NA	NA	NA	1.5452538631346577	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020217	Chromosome_8A	638	1	15	52.82131661442006	0.34212784212784214	0	1	0	0	1	0	NA	NA	NA	0.6634499396863691	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020137	Chromosome_8A	1175	5	30	40.93617021276596	0.6331046373792162	2.6455026455026456	24	0	3.935185185185185	13	0	0.9259259259259259	11	0	0.3171247357293869	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020393	Chromosome_8A	1029	4	34	45.77259475218659	0.6335747917421224	0.38138825324180015	34	0	0.38910505836575876	33	0	0	1	0	0.8547008547008547	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020138	Chromosome_8A	1215	4	40	44.52674897119341	0.6652066794415549	1.179245283018868	40	0	1.139240506329114	38	0	1.7241379310344827	2	0	0.6500260010400416	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020206	Chromosome_8A	411	1	22	50.12165450121655	0.8526166902404526	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9280742459396751	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002330	Chromosome_8A	2799	1	75	50.51804215791354	0.4200978577360643	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7154650522839846	57	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020392	Chromosome_8A	963	2	30	40.60228452751817	0.7600631412786109	0.4898169631348286	28	0	0.5173900546133946	26	0	0.25	2	0	0.5893909626719057	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011117	Chromosome_8A	11731	8	185	36.06683147216776	0.4866445121636742	1.1748251748251748	106	0	2.845528455284553	12	0	1.051366776809853	94	0	1.2951226233122073	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020139	Chromosome_8A	1828	6	64	45.076586433260395	0.6904015815408221	0.6752608962553714	61	0	0.6172839506172839	55	0	0.9009009009009009	6	0	0.42164441321152496	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020140	Chromosome_8A	1516	4	65	50.13192612137203	0.6827125595831948	0.44642857142857145	10	0	0.44642857142857145	10	0	NA	NA	NA	0.44642857142857145	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020141	Chromosome_8A	1516	4	66	50.46174142480211	0.68430267549379	0.7901668129938543	41	0	0.7407407407407407	40	0	1.694915254237288	1	0	0.5012531328320802	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020142	Chromosome_8A	2008	8	60	43.276892430278885	0.6384737678855326	0.8562415502478594	53	0	0.8495752123938031	48	0	0.9174311926605505	5	0	0.9631922944616443	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020143	Chromosome_8A	2088	5	98	52.10727969348659	0.7041261910415096	1.4637002341920375	56	0	1.4462809917355373	43	0	1.4864864864864864	13	0	1.0126582278481013	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN005024	Chromosome_8A	897	1	17	38.90746934225195	0.5064766839378239	15.487179487179487	17	0	15.487179487179487	17	0	NA	NA	NA	5.677154582763338	59	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN004531	Chromosome_8A	4833	2	139	50.15518311607697	0.45733427098430884	1.0204081632653061	8	0	NA	NA	NA	1.0204081632653061	8	0	12.444160816847479	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012807	Chromosome_8A	3023	4	25	35.726099900760836	0.2618903231395651	6.896551724137931	25	0	9.25925925925926	12	0	4.6	13	0	13.121845710165825	19	0	unmethylated (<10%)	Q5F4A1	G2/M phase-specific E3 ubiquitin-protein ligase (EC 2.3.2.26) (G2/M phase-specific HECT-type E3 ubiquitin transferase)	heterochromatin formation [GO:0031507]; pericentric heterochromatin formation [GO:0031508]; protein localization to chromosome [GO:0034502]; protein localization to condensed nuclear chromosome [GO:1903084]; protein ubiquitination [GO:0016567]	hit with GO BP
GN020028	Chromosome_8A	286	2	5	40.55944055944056	0.48922340061580566	0.16583747927031509	5	0	0.16583747927031509	5	0	NA	NA	NA	0.8365867261572784	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011065	Chromosome_8A	1732	1	40	43.12933025404157	0.49688015491644555	2.8846153846153846	22	0	2.8846153846153846	22	0	NA	NA	NA	2.3660403618649966	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020133	Chromosome_8A	31428	7	654	36.35611556573756	0.630351973070846	74.24564163062	618	0.7394822006472492	67.62589928057554	26	0.6923076923076923	74.47010353987098	592	0.7415540540540541	85.84041857423152	50	0.86	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020132	Chromosome_8A	4409	6	108	34.747108187797686	0.81304222365269	0.5166051660516605	108	0	0.3115264797507788	22	0	0.5802707930367504	86	0	0.40070122714750817	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020131	Chromosome_8A	490	2	5	34.89795918367347	0.3377446925834023	1.3559322033898304	5	0	0.45871559633027525	4	0	3.896103896103896	1	0	0.49889135254988914	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020431	Chromosome_8A	2547	3	70	38.39811542991755	0.7480584214788304	0.5787781350482315	70	0	0.6507592190889371	41	0	0.47393364928909953	29	0	0.6939854593522803	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001351	Chromosome_8A	1433	2	38	43.96371249127704	0.550396215735425	0.35587188612099646	37	0	0.3518029903254178	28	0	0.373134328358209	9	0	0.34083162917518744	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020130	Chromosome_8A	32045	5	809	37.0447807770323	0.7358688507130953	0.875841375395345	807	0	0.6460544531610521	34	0	0.8901395509102394	773	0	0.5689277899343544	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020129	Chromosome_8A	1110	1	40	41.08108108108108	0.8564814814814815	0.5977796754910333	40	0	0.5977796754910333	40	0	NA	NA	NA	0.576036866359447	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020128	Chromosome_8A	159	1	8	47.79874213836478	0.9464285714285714	0.33557046979865773	8	0	0.33557046979865773	8	0	NA	NA	NA	0.4043905257076834	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020036	Chromosome_8A	217	1	14	52.995391705069125	0.9644444444444444	0.7168458781362007	14	0	0.7168458781362007	14	0	NA	NA	NA	0.5042355788624445	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019972	Chromosome_8A	1558	3	67	43.966623876765084	0.8948189548758744	0.4782146652497343	67	0	0.5952380952380952	46	0	0.24115755627009647	21	0	0.6653992395437263	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020148	Chromosome_8A	519	1	23	42.19653179190752	0.9957457457457457	0.5258545135845749	23	0	0.5258545135845749	23	0	NA	NA	NA	0.33318188702105106	64	0	unmethylated (<10%)	P34456	Uncharacterized protein F54H12.2	deoxyribonucleotide biosynthetic process [GO:0009263]	hit with GO BP
GN020149	Chromosome_8A	423	1	19	40.8983451536643	1.0872564935064934	0.31545741324921134	19	0	0.31545741324921134	19	0	NA	NA	NA	0.34351835111191464	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020126	Chromosome_8A	11156	5	207	35.82825385442811	0.5799629915374787	85.57610724588494	187	0.8609625668449198	39.7822445561139	23	0.30434782608695654	90.73829305135952	164	0.9390243902439024	0.7607041947402738	64	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020125	Chromosome_8A	1044	1	38	49.42528735632184	0.5980192646859314	0	7	0	0	7	0	NA	NA	NA	0.29711375212224106	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020124	Chromosome_8A	504	1	24	44.44444444444444	0.9736778555904371	0.3091190108191654	24	0	0.3091190108191654	24	0	NA	NA	NA	0.45967404931048894	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003219	Chromosome_8A	926	2	63	55.183585313174945	0.9065734265734265	0.875	55	0	0.9320905459387483	51	0	0	4	0	0.5095541401273885	82	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020123	Chromosome_8A	738	1	64	55.96205962059621	1.1307095662166045	0.78125	47	0	0.78125	47	0	NA	NA	NA	0.7377979568671964	97	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020122	Chromosome_8A	1431	1	86	51.08315863032844	0.9290243681492889	0.5924170616113744	82	0	0.5924170616113744	82	0	NA	NA	NA	0.44642857142857145	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016014	Chromosome_8A	234	1	14	47.43589743589744	1.064327485380117	0.31446540880503143	14	0	0.31446540880503143	14	0	NA	NA	NA	0.6208425720620843	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020121	Chromosome_8A	987	1	35	40.62816616008105	0.8602271029433737	0.4581151832460733	35	0	0.4581151832460733	35	0	NA	NA	NA	1.142689715792558	79	0	unmethylated (<10%)	Q9UBM8	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C (EC 2.4.1.145) (N-acetylglucosaminyltransferase IV homolog) (hGnT-IV-H) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVc) (GlcNAc-T IVc) (GnT-IVc) (N-acetylglucosaminyltransferase IVc) (UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVc)	protein N-linked glycosylation [GO:0006487]; viral protein processing [GO:0019082]	hit with GO BP
GN019966	Chromosome_8A	483	1	18	48.4472049689441	0.6355263157894737	1.051779935275081	17	0	1.051779935275081	17	0	NA	NA	NA	0.4700854700854701	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017548	Chromosome_8A	168	1	2	45.23809523809524	0.24086021505376345	0	2	0	0	2	0	NA	NA	NA	4.495614035087719	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003241	Chromosome_8A	1692	1	14	36.170212765957444	0.2540649534514565	NA	0	NA	NA	NA	NA	NA	NA	NA	1.694915254237288	2	0	NA	Q9UUA2	ATP-dependent DNA helicase pfh1 (EC 5.6.2.3) (DNA 5'-3' helicase pfh1) (DNA repair and recombination helicase pfh1) (PIF1 helicase homolog) (RRM3/PIF1 homolog 1)	DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA strand elongation involved in mitotic DNA replication [GO:1902983]; mitochondrial DNA repair [GO:0043504]; mitotic recombination-dependent replication fork processing [GO:1990426]; removal of RNA primer involved in mitotic DNA replication [GO:1903469]; replication fork processing [GO:0031297]; replication fork reversal [GO:0071932]; telomere maintenance [GO:0000723]	hit with GO BP
GN020147	Chromosome_8A	916	2	15	27.83842794759825	0.8455384615384616	0.6103763987792472	15	0	1.6	5	0	0.2728512960436562	10	0	0.5452562704471101	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020127	Chromosome_8A	1011	1	43	41.147378832838776	1.0052025527192008	1.243781094527363	26	0	1.243781094527363	26	0	NA	NA	NA	0.33112582781456956	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003240	Chromosome_8A	3365	4	28	34.23476968796434	0.2840561359079878	0	4	0	0	1	0	0	3	0	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN002884	Chromosome_8A	2479	6	33	38.44292053247277	0.36051031200423056	0.4851004851004851	33	0	0.5564830272676683	23	0	0.3673094582185491	10	0	1.3356311934510987	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021277	Chromosome_8A	194	1	7	46.90721649484536	0.6598639455782312	0.5181347150259067	7	0	0.5181347150259067	7	0	NA	NA	NA	16.441899131719932	74	0	unmethylated (<10%)	O95210	Starch-binding domain-containing protein 1 (Genethonin-1) (Glycophagy cargo receptor STBD1)	glycogen catabolic process [GO:0005980]; glycophagy [GO:0061723]; lysosomal transport [GO:0007041]; substrate localization to autophagosome [GO:0061753]	hit with GO BP
GN020120	Chromosome_8A	24875	11	439	36.8	0.5233893404641279	62.60467550593161	435	0.6160919540229886	71.6863721219664	112	0.7946428571428571	60.1866681393936	323	0.5541795665634675	41.20394395433316	33	0.42424242424242425	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020119	Chromosome_8A	10749	7	304	36.45920550748907	0.8511180950267471	0.6486486486486487	304	0	0.4784688995215311	44	0	0.6668946648426812	260	0	0.6639427987742594	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020117	Chromosome_8A	2916	2	86	38.237311385459535	0.8068622025456558	0.4066142586066685	86	0	0.3605769230769231	65	0	0.5029337803855826	21	0	0.777363184079602	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020116	Chromosome_8A	2776	2	79	38.184438040345825	0.781523176211909	0.5935645110902843	79	0	0.5840634125990822	62	0	0.6218905472636815	17	0	1.1787819253438114	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020115	Chromosome_8A	34335	11	830	34.10514052715887	0.8313884077446241	0.5956926836719107	827	0	0.573175391669851	60	0	0.5970563732296584	767	0	0.5721291377196567	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020113	Chromosome_8A	718	2	6	34.401114206128135	0.2826771653543307	85	6	1	88.0952380952381	3	1	82.54716981132076	3	1	81.1289429994466	46	0.9130434782608695	methylated (>=50%)	Q09325	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (EC 2.4.1.101) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I) (GNT-I) (GlcNAc-T I)	galactose catabolic process via UDP-galactose, Leloir pathway [GO:0033499]; in utero embryonic development [GO:0001701]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN020112	Chromosome_8A	6507	5	242	41.140310434916245	0.881181359420624	1.1486751076882913	235	0	0.8610380291796221	148	0	1.4942528735632183	87	0	2.73224043715847	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020109	Chromosome_8A	21458	13	513	37.198247739770714	0.6915291099289622	1.239036021459593	509	0.0019646365422396855	0.7984031936127745	85	0	1.3037109375	424	0.0023584905660377358	0.9212950776520137	75	0	unmethylated (<10%)	Q8NDA2	Hemicentin-2	homophilic cell-cell adhesion [GO:0007156]; synapse organization [GO:0050808]	hit with GO BP
GN020108	Chromosome_8A	28627	16	793	35.58877982324379	0.8760510266712435	1.0725397085311936	766	0	0.3195617438940881	88	0	1.1747930938284616	678	0	0.48661800486618007	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020107	Chromosome_8A	17407	9	511	35.910840466479	0.9105861466883857	0.6409363243695138	511	0	0.34762456546929316	51	0	0.6596990586316803	460	0	0.5302226935312832	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020106	Chromosome_8A	8492	9	202	33.78473857748469	0.8339340527706178	1.0689242346502479	199	0	0.5224205485415759	49	0	1.2025114398212196	150	0	4.4298605414273995	54	0	unmethylated (<10%)	Q8NDA2	Hemicentin-2	homophilic cell-cell adhesion [GO:0007156]; synapse organization [GO:0050808]	hit with GO BP
GN020105	Chromosome_8A	26226	17	590	34.69839090978418	0.7509450547231965	0.8316258888754972	583	0	0.504364694471387	85	0	0.8918060856847287	498	0	1.4246004169562196	43	0	unmethylated (<10%)	Q059Y8	E3 ubiquitin-protein ligase DCST1 (EC 2.3.2.27) (DC-STAMP domain-containing protein 1) (RING-type E3 ubiquitin transferase)	fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; protein ubiquitination [GO:0016567]; sperm-egg recognition [GO:0035036]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020591	Chromosome_8A	1131	1	43	53.84615384615385	0.5298289574027671	0.8746355685131195	26	0	0.8746355685131195	26	0	NA	NA	NA	6.070878274268105	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020582	Chromosome_8A	918	1	21	50.871459694989106	0.3589275740085645	0.5025125628140703	15	0	0.5025125628140703	15	0	NA	NA	NA	1.5048369759942672	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020103	Chromosome_8A	12852	4	314	37.12262682850918	0.7096584272650441	69.57671957671958	313	0.6964856230031949	37.140385031364914	110	0.22727272727272727	81.32393262828046	203	0.9507389162561576	85.62705495537811	38	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016068	Chromosome_8A	446	1	17	46.860986547085204	0.6947040498442367	1.858736059479554	17	0	1.858736059479554	17	0	NA	NA	NA	1.0410804727068093	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002590	Chromosome_8A	1442	2	44	38.62690707350902	0.8279569892473119	2.496016994158258	44	0	1.3368983957219251	35	0	6.976744186046512	9	0	0.967741935483871	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020171	Chromosome_8A	655	2	10	37.099236641221374	0.4520358868184955	0.631578947368421	9	0	0.631578947368421	9	0	NA	NA	NA	0.7763221737020863	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020252	Chromosome_8A	534	1	4	37.265917602996254	0.21619433198380567	31.372549019607842	4	0	31.372549019607842	4	0	NA	NA	NA	36.152055857253686	26	0.038461538461538464	NA	NA	NA	NA	no Swiss-Prot hit
GN013405	Chromosome_8A	374	1	15	43.850267379679146	0.8344489067380634	1.910828025477707	11	0	1.910828025477707	11	0	NA	NA	NA	9.38888888888889	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020096	Chromosome_8A	964	3	24	39.83402489626556	0.63049461779534	0.6666666666666666	24	0	0.7017543859649122	20	0	0.5128205128205128	4	0	0.5161895823557016	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020094	Chromosome_8A	31630	20	741	35.959532089788176	0.7259273341405996	1.7267742275651166	740	0	0.6039415130324222	66	0	1.8283217386304835	674	0	0.8514986376021798	47	0	unmethylated (<10%)	P18433	Receptor-type tyrosine-protein phosphatase alpha (Protein-tyrosine phosphatase alpha) (R-PTP-alpha) (EC 3.1.3.48)	integrin-mediated signaling pathway [GO:0007229]; regulation of focal adhesion assembly [GO:0051893]; signal transduction [GO:0007165]	hit with GO BP
GN016543	Chromosome_8A	403	1	31	64.51612903225806	0.7436309523809523	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4549590536851683	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001162	Chromosome_8A	1149	2	22	41.601392515230636	0.4663407434738493	0.7692307692307693	10	0	0.4672897196261682	7	0	2.1739130434782608	3	0	0.47393364928909953	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020093	Chromosome_8A	3826	6	83	38.238369053842135	0.5990281482375756	42.29314420803782	83	0.30120481927710846	41.30009775171065	46	0.2826086956521739	43.223443223443226	37	0.32432432432432434	49.254449254449256	45	0.4222222222222222	sparse (10-50%)	Q6TDP3	Kelch-like protein 17 (Actinfilin)	actin cytoskeleton organization [GO:0030036]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation protein catabolic process at postsynapse [GO:0140252]	hit with GO BP
GN017522	Chromosome_8A	2325	4	53	38.32258064516129	0.6217267580903945	7.792207792207792	5	0	7.792207792207792	5	0	NA	NA	NA	1.9138755980861244	13	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020089	Chromosome_8A	7786	6	92	39.32699717441562	0.3118641352239045	69.4253438113949	88	0.7272727272727273	79.48717948717949	21	0.8571428571428571	67.60440835266822	67	0.6865671641791045	3.427660422479075	39	0	methylated (>=50%)	P40305	Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a)) (ISG12A)	apoptotic process [GO:0006915]; defense response to virus [GO:0051607]; extrinsic apoptotic signaling pathway [GO:0097191]; host-mediated perturbation of viral genome replication [GO:0044827]; innate immune response [GO:0045087]; intrinsic apoptotic signaling pathway [GO:0097193]; negative regulation of transcription by RNA polymerase II [GO:0000122]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; pyroptotic inflammatory response [GO:0070269]; regulation of protein export from nucleus [GO:0046825]; type I interferon-mediated signaling pathway [GO:0060337]	hit with GO BP
GN020088	Chromosome_8A	33072	10	570	37.642114175133045	0.4885411163323528	64.16367359269579	535	0.7271028037383177	69.48873007146784	59	0.8135593220338984	63.81738881738882	476	0.7163865546218487	83.7173100871731	68	0.9117647058823529	methylated (>=50%)	Q13490	Baculoviral IAP repeat-containing protein 2 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 1) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (hIAP-2) (hIAP2) (RING finger protein 48) (RING-type E3 ubiquitin transferase BIRC2) (TNFR2-TRAF-signaling complex protein 2)	canonical NF-kappaB signal transduction [GO:0007249]; cell surface receptor signaling pathway [GO:0007166]; extrinsic apoptotic signaling pathway via death domain receptors [GO:0008625]; inflammatory response [GO:0006954]; intrinsic apoptotic signaling pathway in response to DNA damage [GO:0008630]; necroptotic process [GO:0070266]; negative regulation of apoptotic process [GO:0043066]; negative regulation of necroptotic process [GO:0060546]; non-canonical NF-kappaB signal transduction [GO:0038061]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of protein K48-linked ubiquitination [GO:1902524]; positive regulation of protein K63-linked ubiquitination [GO:1902523]; positive regulation of protein monoubiquitination [GO:1902527]; positive regulation of protein ubiquitination [GO:0031398]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of apoptotic process [GO:0042981]; regulation of cell cycle [GO:0051726]; regulation of cell differentiation [GO:0045595]; regulation of cell population proliferation [GO:0042127]; regulation of inflammatory response [GO:0050727]; regulation of innate immune response [GO:0045088]; regulation of necroptotic process [GO:0060544]; regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway [GO:0070424]; regulation of RIG-I signaling pathway [GO:0039535]; regulation of toll-like receptor signaling pathway [GO:0034121]; response to bleomycin [GO:1904975]; response to cAMP [GO:0051591]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; tumor necrosis factor-mediated signaling pathway [GO:0033209]	hit with GO BP
GN020092	Chromosome_8A	1751	2	48	38.263849229011996	0.7506363368432334	0.5113636363636364	47	0	0.9389671361502347	19	0	0.26761819803746656	28	0	0.9399855386840202	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020090	Chromosome_8A	2787	4	32	36.9573017581629	0.3450044680678218	87.59305210918114	32	0.9375	92.13483146067416	3	1	87.02928870292887	29	0.9310344827586207	67.11409395973155	35	0.7428571428571429	methylated (>=50%)	P55814	Ornithine decarboxylase antizyme 1 (ODC-Az)	positive regulation of intracellular protein transport [GO:0090316]; positive regulation of protein catabolic process [GO:0045732]	hit with GO BP
GN020091	Chromosome_8A	24889	7	388	37.63509984330427	0.4481919502172519	83.20992938155361	352	0.9545454545454546	93.40827797649463	42	1	82.27765321375186	310	0.9483870967741935	91.03199639477242	26	0.9615384615384616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020014	Chromosome_8A	165	1	1	37.57575757575758	0.1762820512820513	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6980802792321117	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001490	Chromosome_8A	2642	5	50	35.57910673732021	0.5981408279790447	52.2140221402214	27	0.5185185185185185	50.43478260869565	12	0.4166666666666667	53.52564102564103	15	0.6	36.200716845878134	21	0.3333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN016101	Chromosome_8A	726	1	18	47.107438016528924	0.4478870343078452	NA	0	NA	NA	NA	NA	NA	NA	NA	1.9358741681790683	33	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001681	Chromosome_8A	1698	4	46	51.531213191990574	0.41474889287724476	0.6097560975609756	12	0	0.6802721088435374	11	0	0	1	0	0.5606728073688426	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020087	Chromosome_8A	1866	1	9	51.98285101822079	0.11198911717046432	0	3	0	0	3	0	NA	NA	NA	0.6472491909385113	37	0	NA	NA	NA	NA	no Swiss-Prot hit
GN003220	Chromosome_8A	264	1	9	51.515151515151516	0.5139519792342635	0	6	0	0	6	0	NA	NA	NA	6.5359477124183005	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020459	Chromosome_8A	1567	3	13	33.82259093809828	0.29174364482635157	10.423452768729641	7	0	5.649717514124294	4	0	16.923076923076923	3	0	1.252408477842004	31	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020458	Chromosome_8A	1278	3	21	33.80281690140845	0.57528080253794045	1.3888888888888888	21	0	1.4112903225806452	20	0	1.3392857142857142	1	0	0.8384146341463414	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015868	Chromosome_8A	492	1	18	50.203252032520325	0.5827849434061595	0	4	0	0	4	0	NA	NA	NA	1.477832512315271	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020079	Chromosome_8A	6845	8	180	34.33162892622352	0.8928260869565218	0.712180746561886	178	0	0.6286672254819782	50	0	0.7467870788468218	128	0	0.6605850896508336	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020080	Chromosome_8A	15497	10	542	37.2394657030393	1.0090962389141316	1.4331909457463372	542	0	0.6458022851465475	103	0	1.5839794510773915	439	0	0.9100937672366244	63	0	unmethylated (<10%)	Q9NS40	Voltage-gated inwardly rectifying potassium channel KCNH7 (Ether-a-go-go-related gene potassium channel 3) (ERG-3) (Eag-related protein 3) (Ether-a-go-go-related protein 3) (hERG-3) (Potassium voltage-gated channel subfamily H member 7) (Voltage-gated potassium channel subunit Kv11.3)	potassium ion transmembrane transport [GO:0071805]; potassium ion transport [GO:0006813]; regulation of membrane potential [GO:0042391]	hit with GO BP
GN020081	Chromosome_8A	9281	15	303	39.14448874043745	0.8540973937383145	0.6702038536721586	300	0	0.7366482504604052	97	0	0.6338231057332181	203	0	0.7895535985423626	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020082	Chromosome_8A	2889	5	84	37.97161647628938	0.8070476494532685	0.5136523384698567	84	0	0.8791208791208791	41	0	0.29991431019708653	43	0	0.49910873440285203	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020086	Chromosome_8A	5673	9	174	38.63916798871849	0.8226398426561771	0.7184441967050663	173	0	0.43613707165109034	43	0	0.7884972170686456	130	0	1.8604651162790697	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020077	Chromosome_8A	25623	15	643	34.62514147445654	0.8379860367780068	2.8048176868503547	357	0	0.4701733764325595	43	0	3.342354533152909	314	0	0.5013763271726307	53	0	unmethylated (<10%)	Q15262	Receptor-type tyrosine-protein phosphatase kappa (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) (EC 3.1.3.48)	cell adhesion [GO:0007155]; cell migration [GO:0016477]; cellular response to reactive oxygen species [GO:0034614]; cellular response to UV [GO:0034644]; focal adhesion assembly [GO:0048041]; negative regulation of cell cycle [GO:0045786]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of keratinocyte proliferation [GO:0010839]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; protein localization to cell surface [GO:0034394]; signal transduction [GO:0007165]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN020078	Chromosome_8A	12997	12	402	35.56974686466108	0.9779474908527889	0.5920783993466721	257	0	0.684931506849315	53	0	0.5718547986076579	204	0	0.8797653958944281	25	0	unmethylated (<10%)	Q15262	Receptor-type tyrosine-protein phosphatase kappa (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) (EC 3.1.3.48)	cell adhesion [GO:0007155]; cell migration [GO:0016477]; cellular response to reactive oxygen species [GO:0034614]; cellular response to UV [GO:0034644]; focal adhesion assembly [GO:0048041]; negative regulation of cell cycle [GO:0045786]; negative regulation of cell migration [GO:0030336]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of keratinocyte proliferation [GO:0010839]; neuron projection development [GO:0031175]; protein dephosphorylation [GO:0006470]; protein localization to cell surface [GO:0034394]; signal transduction [GO:0007165]; transforming growth factor beta receptor signaling pathway [GO:0007179]	hit with GO BP
GN020073	Chromosome_8A	4572	4	72	39.72003499562555	0.40120171359971724	92.79875437913586	63	0.9523809523809523	96.045197740113	26	1	89.77443609022556	37	0.918918918918919	90.68982151471297	36	1	methylated (>=50%)	Q5R7S6	AN1-type zinc finger protein 6 (Zinc finger A20 domain-containing protein 3)	cellular response to tumor necrosis factor [GO:0071356]; negative regulation of apoptotic process [GO:0043066]; protein targeting to peroxisome [GO:0006625]; regulation of canonical NF-kappaB signal transduction [GO:0043122]	hit with GO BP
GN020074	Chromosome_8A	6734	3	83	35.714285714285715	0.38844617914385354	88.38004101161997	77	0.8961038961038961	96.46643109540636	12	1	87.18284070102014	65	0.8769230769230769	76.62404092071611	42	0.8333333333333334	methylated (>=50%)	Q28C98	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 (EC 3.1.7.2) (HD domain-containing protein 3) (Metazoan SpoT homolog 1) (MESH1) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) ((ppGpp)ase)	NA	hit, no GO BP
GN020075	Chromosome_8A	24099	19	392	35.97659653927549	0.5157257233299908	84.27239713975516	380	0.9526315789473684	94.95748467470833	77	0.987012987012987	81.77703888427081	303	0.9438943894389439	32.60429323612799	47	0.425531914893617	methylated (>=50%)	Q9JMG7	Hepatoma-derived growth factor-related protein 3 (HRP-3)	microtubule polymerization [GO:0046785]; negative regulation of microtubule depolymerization [GO:0007026]; neuron projection development [GO:0031175]	hit with GO BP
GN020076	Chromosome_8A	9558	7	134	34.892236869638	0.4617474538080216	86.23046875	134	0.9850746268656716	94.49300699300699	29	1	84.88933030646992	105	0.9809523809523809	94.78908188585608	22	1	methylated (>=50%)	P0C546	Mitochondrial coenzyme A transporter SLC25A42 (Solute carrier family 25 member 42)	ADP transport [GO:0015866]; AMP transport [GO:0080121]; ATP transport [GO:0015867]; coenzyme A transmembrane transport [GO:0035349]; mitochondrial coenzyme A transmembrane transport [GO:1990559]	hit with GO BP
GN020072	Chromosome_8A	5718	7	85	35.851696397341726	0.4660455027946621	87.38902340597255	83	0.9156626506024096	93.55263157894737	16	1	86.27264061010486	67	0.8955223880597015	79.71014492753623	25	0.96	methylated (>=50%)	Q3MHP2	Ras-related protein Rab-11B (EC 3.6.5.2)	amyloid-beta clearance by transcytosis [GO:0150093]; cellular response to acidic pH [GO:0071468]; constitutive secretory pathway [GO:0045054]; endocytic recycling [GO:0032456]; establishment of protein localization to membrane [GO:0090150]; insulin secretion involved in cellular response to glucose stimulus [GO:0035773]; melanosome transport [GO:0032402]; receptor recycling [GO:0001881]; regulated exocytosis [GO:0045055]; regulation of cilium assembly [GO:1902017]; regulation of endocytic recycling [GO:2001135]; regulation of monoatomic anion transport [GO:0044070]; regulation of protein localization to cell surface [GO:2000008]; transferrin transport [GO:0033572]	hit with GO BP
GN020071	Chromosome_8A	6574	10	74	35.686035898996046	0.3560470605456242	84.6058502726822	74	0.918918918918919	88.57774502579218	27	1	82.5924542398207	47	0.8723404255319149	40.41994750656168	41	0.3170731707317073	methylated (>=50%)	Q9D799	Methionyl-tRNA formyltransferase, mitochondrial (MtFMT) (EC 2.1.2.9)	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA [GO:0071951]	hit with GO BP
GN020063	Chromosome_8A	4723	5	71	36.968028795257254	0.4445117546080582	91.57370045098504	71	1	92.6493710691824	50	1	89.93409227082086	21	1	78.43959731543625	32	0.875	methylated (>=50%)	Q9QZN1	F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat protein 17) (F-box only protein 13)	nervous system development [GO:0007399]; neural crest cell differentiation [GO:0014033]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]; protein ubiquitination [GO:0016567]; regulation of smoothened signaling pathway [GO:0008589]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN020064	Chromosome_8A	10516	14	257	35.24153670597185	0.7879041248606466	0.5019011406844106	256	0	0.4138338752586462	78	0	0.5324050373707382	178	0	0.5672339005672339	57	0	unmethylated (<10%)	Q05733	Histidine decarboxylase (HDC) (EC 4.1.1.22)	histamine biosynthetic process [GO:0001694]; L-histidine catabolic process [GO:0006548]; thermotaxis [GO:0043052]	hit with GO BP
GN020065	Chromosome_8A	15220	16	244	37.28646517739816	0.46978279844657245	89.20035039419346	231	0.948051948051948	95.03728464901003	131	0.9847328244274809	83.66650414431984	100	0.9	11.379962192816635	51	0.13725490196078433	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020066	Chromosome_8A	4109	7	30	32.22195181309321	0.2822612960618058	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020062	Chromosome_8A	32675	15	754	35.06962509563887	0.7505369867400496	0.8258462655413377	705	0	0.4624871531346352	57	0	0.8610392195898865	648	0	0.8160703075957313	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020059	Chromosome_8A	9751	10	273	35.955286637267974	0.8663721937936132	1.8791675085875934	273	0	1.442495126705653	58	0	1.9703631330402214	215	0	2.0137784843667195	51	0	unmethylated (<10%)	P33015	Thiosulfate transporter TsuA (Thiosulfate uptake protein A)	thiosulfate transport [GO:0015709]	hit with GO BP
GN020040	Chromosome_8A	241	1	14	44.81327800829875	1.163448275862069	0.4092769440654843	14	0	0.4092769440654843	14	0	NA	NA	NA	6.521739130434782	61	0.03278688524590164	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020170	Chromosome_8A	17654	14	316	36.065480910841735	0.5612479187102292	91.70403587443946	315	0.9968253968253968	92.70674397314617	61	0.9836065573770492	91.51342885318174	254	1	35.09891512444161	36	0.6111111111111112	methylated (>=50%)	Q4PZA2	Endothelin-converting enzyme 1 (ECE-1) (EC 3.4.24.71)	axon guidance [GO:0007411]; axonogenesis involved in innervation [GO:0060385]; blood vessel diameter maintenance [GO:0097746]; bradykinin catabolic process [GO:0010815]; calcitonin catabolic process [GO:0010816]; ear development [GO:0043583]; embryonic digit morphogenesis [GO:0042733]; embryonic heart tube development [GO:0035050]; endothelin maturation [GO:0034959]; gene expression [GO:0010467]; heart development [GO:0007507]; hormone catabolic process [GO:0042447]; neuron projection development [GO:0031175]; peptide hormone processing [GO:0016486]; pharyngeal system development [GO:0060037]; positive regulation of cAMP/PKA signal transduction [GO:0141163]; positive regulation of cardiac muscle hypertrophy [GO:0010613]; positive regulation of G protein-coupled receptor signaling pathway [GO:0045745]; positive regulation of receptor recycling [GO:0001921]; protein processing [GO:0016485]; regulation of blood pressure [GO:0008217]; regulation of ERK1 and ERK2 cascade [GO:0070372]; response to hypoxia [GO:0001666]; semaphorin-plexin signaling pathway [GO:0071526]; substance P catabolic process [GO:0010814]; sympathetic neuron axon guidance [GO:0097492]	hit with GO BP
GN020052	Chromosome_8A	1989	2	25	37.35545500251383	0.3604044357469015	55	25	0.64	49.532710280373834	3	0.6666666666666666	55.84415584415584	22	0.6363636363636364	35.22785458269329	30	0.36666666666666664	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020055	Chromosome_8A	8871	11	192	34.471874647728555	0.7296355317945818	0.5195105056568922	191	0	0.551654964894684	46	0	0.5098980203959208	145	0	0.6644518272425249	43	0	unmethylated (<10%)	A0A6I8TCE0	Putative receptor-type tyrosine-protein phosphatase mosPTP-1 (mosPTP-1) (EC 3.1.3.48)	anatomical structure morphogenesis [GO:0009653]; neuron development [GO:0048666]	hit with GO BP
GN016307	Chromosome_8A	537	1	11	39.10614525139665	0.5365609955490962	1.2589928057553956	11	0	1.2589928057553956	11	0	NA	NA	NA	0.8719346049046321	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020018	Chromosome_8A	1046	3	16	35.65965583173996	0.4864833439916284	3.0405405405405403	16	0	3.508771929824561	14	0	1.4705882352941178	2	0	1.8379281537176273	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020056	Chromosome_8A	21169	13	627	36.47314469271104	0.8906801035615627	1.1602536129578767	600	0	0.6710471130993989	153	0	1.2702804678656772	447	0	0.5221932114882507	57	0	unmethylated (<10%)	Q6ZMT9	Death domain-containing protein 1	signal transduction [GO:0007165]	hit with GO BP
GN001233	Chromosome_8A	1321	1	35	44.511733535200605	0.5376475376475377	13.468013468013469	35	0	13.468013468013469	35	0	NA	NA	NA	10.753221010901884	37	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020057	Chromosome_8A	25173	8	434	36.356413617765064	0.5217606713942047	80.04843592330978	421	0.9263657957244655	43.702401874633864	30	0.5666666666666667	82.73799202358245	391	0.9539641943734015	59.68819599109131	27	0.7777777777777778	methylated (>=50%)	Q80UY1	Protein-L-histidine N-pros-methyltransferase CARNMT1 (EC 2.1.1.-) (Carnosine N-methyltransferase) (EC 2.1.1.22)	carnosine metabolic process [GO:0035498]	hit with GO BP
GN017551	Chromosome_8A	168	1	2	45.23809523809524	0.24086021505376345	NA	0	NA	NA	NA	NA	NA	NA	NA	82.42424242424242	49	0.9795918367346939	NA	NA	NA	NA	no Swiss-Prot hit
GN002247	Chromosome_8A	444	1	14	44.5945945945946	0.6534903280067283	82.36173393124066	14	1	82.36173393124066	14	1	NA	NA	NA	85.12820512820512	20	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020058	Chromosome_8A	16560	15	191	35.16304347826087	0.3732858492307358	90.23611997447351	187	0.9946524064171123	92.85714285714286	33	1	89.80293734894961	154	0.9935064935064936	3.3994334277620397	27	0.037037037037037035	methylated (>=50%)	Q5ZLW3	Dymeclin	Golgi organization [GO:0007030]	hit with GO BP
GN003423	Chromosome_8A	588	1	14	41.666666666666664	0.5493126918457226	2.1141649048625792	14	0	2.1141649048625792	14	0	NA	NA	NA	11.125158027812896	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017467	Chromosome_8A	529	1	4	37.051039697542535	0.22115384615384615	1.941747572815534	4	0	1.941747572815534	4	0	NA	NA	NA	5.382027871215762	27	0	NA	NA	NA	NA	no Swiss-Prot hit
GN012999	Chromosome_8A	529	1	18	44.4234404536862	0.6907007108660961	0.11299435028248588	18	0	0.11299435028248588	18	0	NA	NA	NA	0.27142303218301667	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020051	Chromosome_8A	7339	4	194	38.60198937184902	0.7095874844876824	2.684300117847322	156	0	0.34995625546806647	25	0	3.0951647674776717	131	0	0.3954305799648506	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003165	Chromosome_8A	699	1	17	40.34334763948498	0.598458904109589	18.990384615384617	17	0	18.990384615384617	17	0	NA	NA	NA	16.94078947368421	60	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020047	Chromosome_8A	6989	4	147	34.12505365574474	0.7231404551482202	0.7165109034267912	119	0	0.32786885245901637	24	0	0.7811080835603996	95	0	0.5612722170252572	55	0	unmethylated (<10%)	Q8NHV1	GTPase IMAP family member 7 (Immunity-associated nucleotide 7 protein) (IAN-7)	GTP metabolic process [GO:0046039]	hit with GO BP
GN020048	Chromosome_8A	1289	3	40	35.99689681923972	0.9953860113129597	0.5394190871369294	40	0	0.6134969325153374	34	0	0.22026431718061673	6	0	0.48257372654155495	39	0	unmethylated (<10%)	Q8NHV1	GTPase IMAP family member 7 (Immunity-associated nucleotide 7 protein) (IAN-7)	GTP metabolic process [GO:0046039]	hit with GO BP
GN020049	Chromosome_8A	420	1	0	39.285714285714285	0	NA	0	NA	NA	NA	NA	NA	NA	NA	5.2272727272727275	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020050	Chromosome_8A	14784	11	184	35.79545454545455	0.3900150069959527	79.42088934850052	179	0.9217877094972067	81.66589111214519	41	0.9512195121951219	78.85249764373233	138	0.9130434782608695	70.61446977205154	20	0.85	methylated (>=50%)	Q6DFB7	Centrosomal protein POC5 (Protein of centriole 5)	centriole elongation [GO:0061511]; eye photoreceptor cell development [GO:0042462]; negative regulation of centriole elongation [GO:1903723]	hit with GO BP
GN020046	Chromosome_8A	39937	16	393	36.029246062548516	0.30503164467661	83.12971613366871	390	0.9461538461538461	92.9234851835471	59	1	82.02269659551067	331	0.9365558912386707	87.96511627906976	31	0.967741935483871	methylated (>=50%)	P23508	Colorectal mutant cancer protein (Protein MCC)	establishment of protein localization [GO:0045184]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of epithelial cell migration [GO:0010633]; negative regulation of epithelial cell proliferation [GO:0050680]; signal transduction [GO:0007165]	hit with GO BP
GN020031	Chromosome_8A	16865	7	207	33.519122442929145	0.43837307510037465	78.6979969183359	206	0.8737864077669902	81.6793893129771	10	0.9	78.49727618460274	196	0.8724489795918368	1.0451661067562523	50	0	methylated (>=50%)	Q17R06	Ras-related protein Rab-21 (EC 3.6.5.2)	anterograde axonal transport [GO:0008089]; positive regulation of dendrite morphogenesis [GO:0050775]; positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of receptor-mediated endocytosis [GO:0048260]; protein stabilization [GO:0050821]; Rab protein signal transduction [GO:0032482]; regulation of exocytosis [GO:0017157]	hit with GO BP
GN020030	Chromosome_8A	6976	4	231	36.61123853211009	0.9887270382352995	0.7672073651907059	218	0	0.5361930294906166	42	0	0.7995003123048094	176	0	0.6709677419354839	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020029	Chromosome_8A	2512	3	101	44.068471337579616	0.8319626437912354	0.6464124111182935	101	0	0.5453306066803	96	0	2.5	5	0	1.2691610351079612	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020044	Chromosome_8A	15189	17	119	32.51036934623741	0.29749035394039663	74.19631375910845	106	0.8962264150943396	80.13411567476949	17	0.9411764705882353	72.97623148467103	89	0.8876404494382022	44.73684210526316	13	0.38461538461538464	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020043	Chromosome_8A	5606	6	155	36.12201212986086	0.8492478322400057	0.3819709702062643	152	0	0.5882352941176471	29	0	0.3387742531567601	123	0	54.535274356103024	14	0.6428571428571429	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020042	Chromosome_8A	1530	2	68	42.745098039215684	0.9729911716295077	0.5595970900951315	50	0	0.4844961240310077	20	0	0.6622516556291391	30	0	2.468212415856395	37	0	unmethylated (<10%)	Q8R066	Complement C1q tumor necrosis factor-related protein 4 (C1q/TNF-related protein 4)	cell surface receptor signaling pathway via STAT [GO:0097696]; gene expression [GO:0010467]; inflammatory response [GO:0006954]; macrophage activation [GO:0042116]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-6-mediated signaling pathway [GO:0070105]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of tumor necrosis factor production [GO:0032760]; protein import [GO:0017038]; protein phosphorylation [GO:0006468]; reduction of food intake in response to dietary excess [GO:0002023]; response to lipopolysaccharide [GO:0032496]; response to wounding [GO:0009611]; toll-like receptor 4 signaling pathway [GO:0034142]	hit with GO BP
GN020041	Chromosome_8A	6236	4	169	35.615779345734445	0.8555100423905614	0.5726975222066386	169	0	0.34843205574912894	25	0	0.6178907456817863	144	0	0.5775577557755776	47	0	unmethylated (<10%)	Q8NHV1	GTPase IMAP family member 7 (Immunity-associated nucleotide 7 protein) (IAN-7)	GTP metabolic process [GO:0046039]	hit with GO BP
GN020297	Chromosome_8A	399	1	20	43.609022556390975	1.0593389088012743	3.161592505854801	16	0	3.161592505854801	16	0	NA	NA	NA	10.409889394925179	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002715	Chromosome_8A	891	1	20	38.8327721661055	0.5966850828729282	9.927007299270073	16	0	9.927007299270073	16	0	NA	NA	NA	2.2082018927444795	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021365	Chromosome_8A	3232	4	45	34.18935643564357	0.4772436423297785	4.466608846487424	40	0	3.283996299722479	18	0	5.004205214465938	22	0	0.4338046272493573	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020012	Chromosome_8A	558	1	20	47.67025089605735	0.6379694735036872	0.6972111553784861	20	0	0.6972111553784861	20	0	NA	NA	NA	0.44617958728388174	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020024	Chromosome_8A	474	1	20	46.413502109704645	0.7876370887337986	0.4549808429118774	20	0	0.4549808429118774	20	0	NA	NA	NA	2.3748629886737302	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020390	Chromosome_8A	897	1	26	51.50501672240803	0.4370935397417396	NA	0	NA	NA	NA	NA	NA	NA	NA	0	5	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020391	Chromosome_8A	3538	1	97	49.88694177501413	0.4406803601604594	0	8	0	0	8	0	NA	NA	NA	0.5671077504725898	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020223	Chromosome_8A	1073	3	31	39.049394221808015	0.7578719526087947	0.5683836589698046	31	0	0.5045408678102926	24	0	0.7202881152460985	7	0	0.37709168041480084	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020224	Chromosome_8A	339	1	12	56.63716814159292	0.5090727067951445	0.8113590263691683	12	0	0.8113590263691683	12	0	NA	NA	NA	0.4024144869215292	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013389	Chromosome_8A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020010	Chromosome_8A	942	1	35	38.853503184713375	0.9930722891566265	0.3257328990228013	35	0	0.3257328990228013	35	0	NA	NA	NA	0.6144393241167435	51	0	unmethylated (<10%)	V5NAL9	Toll-like receptor 4 (PmTLR4)	signal transduction [GO:0007165]	hit with GO BP
GN020009	Chromosome_8A	9000	6	190	37.44444444444444	0.6173160398201336	74.92625368731564	186	0.8978494623655914	62.63906056860321	35	0.7714285714285715	79.19845277747932	151	0.9271523178807947	49.55555555555556	21	0.5714285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN000991	Chromosome_8A	2584	6	65	37.73219814241486	0.7132241161133617	69.50559364850234	65	0.9538461538461539	71.67115344791883	41	0.9512195121951219	66.50401836969002	24	0.9583333333333334	73.48039215686275	52	0.9038461538461539	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN002922	Chromosome_8A	1883	5	31	34.51938396176315	0.5584009336496518	0.29850746268656714	18	0	0.31347962382445144	17	0	0	1	0	4.654654654654655	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019992	Chromosome_8A	6553	9	127	34.22859758889059	0.6669255093912628	4.210864673738348	78	0	3.0842230130486357	20	0	4.62962962962963	58	0	0.18691588785046728	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019252	Chromosome_8A	2682	9	28	33.29604772557793	0.3768517403348187	35.27777777777778	13	0.5384615384615384	29.487179487179485	6	0.16666666666666666	46.03174603174603	7	0.8571428571428571	0.9873060648801129	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019253	Chromosome_8A	1296	5	13	35.03086419753087	0.3282099234410613	44.30379746835443	3	0.3333333333333333	22.22222222222222	1	0	50.81967213114754	2	0.5	32.88409703504043	12	0.3333333333333333	NA	NA	NA	NA	no Swiss-Prot hit
GN015855	Chromosome_8A	481	2	9	40.95634095634096	0.4471183639743855	2.0408163265306123	3	0	2.0408163265306123	3	0	NA	NA	NA	0.902668759811617	67	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020433	Chromosome_8A	1058	1	25	39.69754253308128	0.6011363636363637	37.13942307692308	21	0.2857142857142857	37.13942307692308	21	0.2857142857142857	NA	NA	NA	8.93239522789844	60	0	sparse (10-50%)	A0A345BJN8	MFS-type transporter clz9 (Squalestatin S1 biosynthesis cluster protein clz9) (Zaragozic acid A biosynthesis cluster protein 9)	export across plasma membrane [GO:0140115]	hit with GO BP
GN011983	Chromosome_8A	312	1	4	42.62820512820513	0.2823529411764706	93.84615384615384	4	1	93.84615384615384	4	1	NA	NA	NA	93.57628165534281	32	1	NA	NA	NA	NA	no Swiss-Prot hit
GN019999	Chromosome_8A	249	1	7	46.98795180722892	0.51385613207547165	21.62162162162162	7	0	21.62162162162162	7	0	NA	NA	NA	11.708980674497916	26	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019980	Chromosome_8A	243	1	10	46.91358024691358	0.74884437596302	1.2567324955116697	10	0	1.2567324955116697	10	0	NA	NA	NA	1.080892608089261	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019985	Chromosome_8A	1331	2	45	39.89481592787378	0.85078125	0.3954740195539932	45	0	0.33573141486810554	22	0	0.4459760794648287	23	0	0.5991735537190083	67	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN019977	Chromosome_8A	243	1	11	47.73662551440329	0.794589774078478	0.41004613018964636	11	0	0.41004613018964636	11	0	NA	NA	NA	0.7322788517867604	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019984	Chromosome_8A	573	1	36	42.582897033158815	1.3994572591587517	0.4219409282700422	29	0	0.4219409282700422	29	0	NA	NA	NA	0.8411044066556957	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019978	Chromosome_8A	573	1	33	42.40837696335078	1.3020933755681037	0.21036527060623447	33	0	0.21036527060623447	33	0	NA	NA	NA	0.4031402503713134	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019990	Chromosome_8A	573	1	34	41.8848167539267	1.3774038461538463	0.48426150121065376	34	0	0.48426150121065376	34	0	NA	NA	NA	0.29631940112289457	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019987	Chromosome_8A	377	1	6	37.93103448275862	0.49605263157894736	0.2557544757033248	6	0	0.2557544757033248	6	0	NA	NA	NA	0.9235315847801995	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019989	Chromosome_8A	627	1	10	37.16108452950558	0.4798714220113271	0.5149330587023687	8	0	0.5149330587023687	8	0	NA	NA	NA	0.3816793893129771	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019974	Chromosome_8A	418	2	9	42.10526315789474	0.5046277665995976	0.4	9	0	0.4	9	0	NA	NA	NA	0.26666666666666666	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019973	Chromosome_8A	5837	3	153	34.778139455199586	0.8680135995707854	0.5459402950400744	151	0	0.38022813688212925	30	0	0.5758157389635317	121	0	1.3926325247079965	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019988	Chromosome_8A	282	1	13	46.808510638297875	0.8511725098676574	0.7915567282321899	13	0	0.7915567282321899	13	0	NA	NA	NA	2.100727174791274	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002137	Chromosome_8A	615	1	14	42.764227642276424	0.49809094064560916	1.7857142857142858	3	0	1.7857142857142858	3	0	NA	NA	NA	7.57002271006813	62	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019967	Chromosome_8A	1434	3	57	41.42259414225941	0.9266821608752338	1.3926084627745046	57	0	1.4697569248162803	55	0	0	2	0	0.5491488193300385	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019968	Chromosome_8A	891	1	0	36.47586980920314	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9133964817320703	52	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019969	Chromosome_8A	4896	8	138	36.60130718954248	0.8427407334416828	0.9805356358846773	138	0	0.8589511754068716	51	0	1.0387362042847867	87	0	0.8830022075055187	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019970	Chromosome_8A	228	1	7	42.10526315789474	0.6975524475524476	1.9230769230769231	2	0	1.9230769230769231	2	0	NA	NA	NA	1.4660493827160495	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011662	Chromosome_8A	2557	4	61	36.40985529917872	0.7198229712766743	3.1578947368421053	30	0	1.8078020932445291	11	0	4.523580365736285	19	0	41.460055096418735	38	0.34210526315789475	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019965	Chromosome_8A	31784	16	735	36.90850742511956	0.6808120000734399	93.24907595087636	712	0.9985955056179775	94.8644793152639	52	1	93.16378790921871	660	0.9984848484848485	92.1760391198044	36	1	methylated (>=50%)	Q7SYH5	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (xSMCTe) (Sodium solute transporter Vito) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]	hit with GO BP
GN019964	Chromosome_8A	8256	8	125	37.8875968992248	0.4226958162944322	93.96593673965937	125	0.992	93.18181818181819	25	1	94.0889472696566	100	0.99	95.09248773121932	44	1	methylated (>=50%)	Q9D0F3	Protein ERGIC-53 (ER-Golgi intermediate compartment 53 kDa protein) (Lectin mannose-binding 1) (p58)	endoplasmic reticulum organization [GO:0007029]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; gene expression [GO:0010467]; Golgi organization [GO:0007030]; in utero embryonic development [GO:0001701]	hit with GO BP
GN019963	Chromosome_8A	9260	5	143	34.1036717062635	0.5311081163466012	84.75544063779358	142	0.8591549295774648	72.92993630573248	14	0.6428571428571429	85.61358909174947	128	0.8828125	0.6930407161420733	83	0	methylated (>=50%)	Q62902	Protein ERGIC-53 (ER-Golgi intermediate compartment 53 kDa protein) (Lectin mannose-binding 1) (p58)	endoplasmic reticulum organization [GO:0007029]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; gene expression [GO:0010467]; Golgi organization [GO:0007030]; in utero embryonic development [GO:0001701]	hit with GO BP
GN019962	Chromosome_8A	12636	9	318	35.21684077239633	0.811723980781631	1.0547718896937348	318	0	0.8261049153242461	61	0	1.0963430201997446	257	0	2.472952086553323	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001762	Chromosome_8A	410	1	15	39.02439024390244	0.9706439393939394	0.54421768707483	15	0	0.54421768707483	15	0	NA	NA	NA	0.8945147679324894	98	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019960	Chromosome_8A	1535	3	14	34.39739413680782	0.30962294869393575	5.339105339105339	12	0	5.031446540880503	5	0	5.430711610486892	7	0	0.5154639175257731	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019961	Chromosome_8A	46406	15	955	36.82066974098177	0.6103522587757299	70.25480928545268	896	0.7946428571428571	93.04723885562208	79	0.9367088607594937	68.99376046824096	817	0.780905752753978	71.01873536299766	43	0.6976744186046512	methylated (>=50%)	A0A2R8QP51	Dipeptidyl peptidase 9 (EC 3.4.14.5)	proteolysis [GO:0006508]; regulation of inflammatory response [GO:0050727]	hit with GO BP
GN019949	Chromosome_8A	25599	18	707	37.91163717332708	0.7730049408952211	0.7864703447460233	707	0	0.5866536299193351	93	0	0.813965221485991	614	0	1.0734732824427482	58	0	unmethylated (<10%)	O35379	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	amygdala development [GO:0021764]; amyloid-beta clearance [GO:0097242]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of lipid antigen via MHC class Ib [GO:0048003]; apoptotic process [GO:0006915]; astrocyte differentiation [GO:0048708]; bilirubin transport [GO:0015723]; blood vessel diameter maintenance [GO:0097746]; carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cell redox homeostasis [GO:0045454]; cellular response to amyloid-beta [GO:1904646]; cellular response to type II interferon [GO:0071346]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; defense response to Gram-positive bacterium [GO:0050830]; DNA damage response [GO:0006974]; endothelial cell apoptotic process [GO:0072577]; endothelium development [GO:0003158]; exploration behavior [GO:0035640]; export across plasma membrane [GO:0140115]; export from cell [GO:0140352]; fibroblast apoptotic process [GO:0044346]; gene expression [GO:0010467]; glial cell differentiation [GO:0010001]; glucocorticoid metabolic process [GO:0008211]; glutathione metabolic process [GO:0006749]; glutathione transmembrane transport [GO:0034775]; glutathione transport [GO:0034635]; granuloma formation [GO:0002432]; hippocampus development [GO:0021766]; hydrogen peroxide biosynthetic process [GO:0050665]; immune response [GO:0006955]; inflammatory response [GO:0006954]; inflammatory response to antigenic stimulus [GO:0002437]; intracellular chemical homeostasis [GO:0055082]; intracellular nitrogen homeostasis [GO:0141067]; leukotriene biosynthetic process [GO:0019370]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; long-chain fatty acid import across plasma membrane [GO:0015911]; lymphocyte migration [GO:0072676]; macrophage activation [GO:0042116]; memory [GO:0007613]; multicellular organism growth [GO:0035264]; neural tissue regeneration [GO:0097719]; neurogenesis [GO:0022008]; NK T cell activation [GO:0051132]; phospholipid efflux [GO:0033700]; phospholipid translocation [GO:0045332]; pigment accumulation [GO:0043476]; positive regulation of cell migration [GO:0030335]; positive regulation of inflammatory response [GO:0050729]; protein localization to cell surface [GO:0034394]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of catalytic activity [GO:0050790]; regulation of cellular response to drug [GO:2001038]; regulation of membrane potential [GO:0042391]; response to fluid shear stress [GO:0034405]; response to glucocorticoid [GO:0051384]; response to oxidative stress [GO:0006979]; response to toxic substance [GO:0009636]; response to type II interferon [GO:0034341]; response to xenobiotic stimulus [GO:0009410]; sphingolipid translocation [GO:0099039]; superoxide anion generation [GO:0042554]; tetrahydrobiopterin metabolic process [GO:0046146]; tissue homeostasis [GO:0001894]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; vasodilation [GO:0042311]; xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN019950	Chromosome_8A	11356	10	262	35.90172595984502	0.7160185786826463	0.5908096280087527	262	0	0.35714285714285715	65	0	0.6507791017415215	197	0	0.7057379564283522	61	0	unmethylated (<10%)	P33527	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cellular response to amyloid-beta [GO:1904646]; cellular response to oxidative stress [GO:0034599]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; export across plasma membrane [GO:0140115]; glutathione transmembrane transport [GO:0034775]; heme catabolic process [GO:0042167]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; phospholipid translocation [GO:0045332]; positive regulation of inflammatory response [GO:0050729]; response to xenobiotic stimulus [GO:0009410]; sphingolipid biosynthetic process [GO:0030148]; sphingolipid translocation [GO:0099039]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]; xenobiotic metabolic process [GO:0006805]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN019951	Chromosome_8A	1129	2	17	42.0726306465899	0.340277285298915	0.672645739910314	17	0	0.7109004739336493	16	0	0	1	0	1.7761989342806395	21	0	unmethylated (<10%)	Q8NBX0	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN019952	Chromosome_8A	494	2	13	46.963562753036435	0.4801495327102804	0	12	0	0	12	0	NA	NA	NA	1.1041009463722398	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019953	Chromosome_8A	594	1	9	40.90909090909091	0.3643675027262814	1.694915254237288	9	0	1.694915254237288	9	0	NA	NA	NA	0.5305039787798409	29	0	unmethylated (<10%)	Q8NBX0	Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-)	glycolipid biosynthetic process [GO:0009247]	hit with GO BP
GN019954	Chromosome_8A	33814	19	472	34.46205713609748	0.47148311707724455	82.63791750537341	464	0.9482758620689655	84.92290119931468	66	1	82.32787012282537	398	0.9396984924623115	60.07311129163282	42	0.7142857142857143	methylated (>=50%)	Q8N4P6	Leucine-rich repeat-containing protein 71	NA	hit, no GO BP
GN019955	Chromosome_8A	4509	4	99	34.08738079396762	0.755836516579974	0.8110992529348986	99	0	0.4329004329004329	38	0	0.9348441926345609	61	0	0.2772963604852686	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019956	Chromosome_8A	2236	3	57	38.059033989266545	0.7054408590247413	0.7352941176470589	57	0	1.1730205278592376	29	0	0.4909983633387889	28	0	0.75	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019957	Chromosome_8A	818	2	31	41.687041564792175	0.8723082215342277	1.2300123001230012	31	0	1.3215859030837005	28	0	0.7575757575757576	3	0	0.5609382967873534	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019958	Chromosome_8A	456	1	24	47.36842105263158	0.9385934819897084	0.7058823529411765	24	0	0.7058823529411765	24	0	NA	NA	NA	0.9400705052878966	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019959	Chromosome_8A	759	1	26	40.843214756258234	0.8214285714285714	17.55952380952381	26	0	17.55952380952381	26	0	NA	NA	NA	14.907437479701201	70	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019946	Chromosome_8A	16904	6	242	38.334122101277806	0.3898477915885688	82.91125139249907	241	0.9253112033195021	90.19836639439907	68	1	81.19148154947678	173	0.8959537572254336	81.24645892351275	64	0.953125	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019944	Chromosome_8A	260	1	6	40.76923076923077	0.5553577785688857	0.6289308176100629	6	0	0.6289308176100629	6	0	NA	NA	NA	0.7429420505200595	68	0	unmethylated (<10%)	P57756	Ficolin-2 (Collagen/fibrinogen domain-containing protein 2) (Ficolin-B) (Ficolin-beta) (L-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; host-mediated suppression of symbiont invasion [GO:0046597]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of opsonization [GO:1903028]; protein localization to cell surface [GO:0034394]; proteolysis [GO:0006508]; recognition of apoptotic cell [GO:0043654]	hit with GO BP
GN019942	Chromosome_8A	6759	6	203	36.35153129161119	0.9133540579401427	0.43175821539937637	178	0	0.47244094488188976	24	0	0.4244482173174873	154	0	0.5852231163130943	48	0	unmethylated (<10%)	O70165	Ficolin-1 (Collagen/fibrinogen domain-containing protein 1) (Ficolin-A) (Ficolin-alpha) (M-ficolin)	cell surface pattern recognition receptor signaling pathway [GO:0002752]; complement activation, lectin pathway [GO:0001867]; G protein-coupled receptor signaling pathway [GO:0007186]; positive regulation of interleukin-8 production [GO:0032757]	hit with GO BP
GN019941	Chromosome_8A	948	1	20	37.0253164556962	0.6182339898265293	0.5336179295624333	20	0	0.5336179295624333	20	0	NA	NA	NA	0.7747795885653219	56	0	unmethylated (<10%)	Q9BX70	BTB/POZ domain-containing protein 2	neurogenesis [GO:0022008]	hit with GO BP
GN019940	Chromosome_8A	447	1	21	44.29530201342282	0.960208674304419	35.87604290822408	21	0	35.87604290822408	21	0	NA	NA	NA	5.775577557755776	42	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019939	Chromosome_8A	25627	18	459	35.67721543684395	0.5633825907836401	83.15999114848418	458	0.9454148471615721	71.08244727209343	92	0.9456521739130435	85.83565029348162	366	0.9453551912568307	65.07666098807496	36	0.6666666666666666	methylated (>=50%)	Q08D64	ATP-binding cassette sub-family B member 6 (ABC-type heme transporter ABCB6) (EC 7.6.2.5)	cellular detoxification of cadmium ion [GO:0098849]; heme metabolic process [GO:0042168]; heme transmembrane transport [GO:0035351]; intracellular copper ion homeostasis [GO:0006878]; melanosome assembly [GO:1903232]; porphyrin-containing compound metabolic process [GO:0006778]; tetrapyrrole metabolic process [GO:0033013]	hit with GO BP
GN020382	Chromosome_8A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN003947	Chromosome_8A	1288	1	15	54.96894409937888	0.15544041450777202	NA	0	NA	NA	NA	NA	NA	NA	NA	0.40816326530612246	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019996	Chromosome_8A	2763	9	24	34.20195439739414	0.2983479105928086	0.8333333333333334	22	0	0.8108108108108109	14	0	0.8695652173913043	8	0	64.22893481717011	14	0.5714285714285714	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019874	Chromosome_8A	6800	2	124	36.8235294117647	0.5387504847923746	77.98525214081828	124	0.9274193548387096	80.24691358024691	21	0.9523809523809523	77.63266428375034	103	0.9223300970873787	79.84886649874055	44	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019935	Chromosome_8A	65131	26	1852	36.06423976293931	0.8745192278413284	0.6480129875445083	1514	0	0.6774286537907178	167	0	0.6449376911833401	1347	0	0.354295837023915	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019932	Chromosome_8A	195	1	5	50.256410256410255	0.4088050314465409	33.439490445859875	4	0	33.439490445859875	4	0	NA	NA	NA	32.97450424929178	25	0.04	NA	NA	NA	NA	no Swiss-Prot hit
GN019911	Chromosome_8A	11276	12	408	39.74813763746009	0.9215680932792111	0.7343222205903951	404	0	0.7390983000739099	94	0	0.7331378299120235	310	0	0.5378271782000718	64	0	unmethylated (<10%)	Q8IRI6	Glucose transporter type 1	glucose homeostasis [GO:0042593]; monosaccharide transmembrane transport [GO:0015749]; positive regulation of peptide hormone secretion [GO:0090277]	hit with GO BP
GN019912	Chromosome_8A	288	1	7	47.56944444444444	0.43243243243243246	2.08955223880597	7	0	2.08955223880597	7	0	NA	NA	NA	0.37243947858473	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019913	Chromosome_8A	1968	1	70	41.514227642276424	0.825691372675945	0.3421309872922776	58	0	0.3421309872922776	58	0	NA	NA	NA	1.1070110701107012	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019908	Chromosome_8A	510	1	16	47.254901960784316	0.563613758806465	0.8032128514056225	15	0	0.8032128514056225	15	0	NA	NA	NA	0.6502890173410405	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019909	Chromosome_8A	1455	1	47	48.72852233676976	0.5456482190731521	0.5376344086021505	20	0	0.5376344086021505	20	0	NA	NA	NA	0.667302192564347	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019904	Chromosome_8A	2855	4	38	35.44658493870403	0.42600729580196883	3.1477627471383975	38	0	3.375	14	0	3.088042049934297	24	0	0.7581501137225171	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019903	Chromosome_8A	36774	14	970	37.40686354489585	0.7584822648844105	0.6088506088506088	776	0	0.6909894969596462	93	0	0.5989617995474511	683	0	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019901	Chromosome_8A	22571	16	519	36.888042178016036	0.6759370297497486	1.188289537804101	518	0	1.0914760914760915	84	0	1.2046081738140084	434	0	0.6782945736434108	61	0	unmethylated (<10%)	Q7SYH5	Sodium-coupled monocarboxylate transporter 1 (Electrogenic sodium monocarboxylate cotransporter) (xSMCTe) (Sodium solute transporter Vito) (Solute carrier family 5 member 8)	acetate transport [GO:0006846]; chloride transport [GO:0006821]; iodide transport [GO:0015705]; lactate transport [GO:0015727]; nicotinate transport [GO:2001142]; nitrate transmembrane transport [GO:0015706]; propanoate transmembrane transport [GO:0015730]; pyruvate transport [GO:0006848]; sodium ion transport [GO:0006814]	hit with GO BP
GN019902	Chromosome_8A	3916	2	117	37.512768130745656	0.8534641735495624	0.5969574427113422	117	0	0.6425233644859814	65	0	0.5745475438092502	52	0	0.456968773800457	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019900	Chromosome_8A	3060	4	30	34.705882352941174	0.32577220077220076	0.8928571428571429	30	0	1.478743068391867	17	0	0.6394884092725819	13	0	0.7765314926660914	60	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN016136	Chromosome_8A	759	1	8	38.6034255599473	0.28318253894226286	0	4	0	0	4	0	NA	NA	NA	0.430416068866571	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019896	Chromosome_8A	4198	2	116	42.28203906622201	0.652558680538805	0.7046170962358613	115	0	0.6436512580456407	88	0	0.810126582278481	27	0	0.5576208178438662	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019895	Chromosome_8A	9880	11	151	33.36032388663968	0.549970416437033	89.3903743315508	87	0.9310344827586207	74.31192660550458	16	0.875	91.38014527845036	71	0.9436619718309859	69.43568173852086	43	0.6744186046511628	methylated (>=50%)	Q6P5M2	Superkiller complex protein 8 (Ski8) (WD repeat-containing protein 61)	nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay [GO:0070478]; rescue of stalled cytosolic ribosome [GO:0072344]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN011488	Chromosome_8A	2974	7	34	32.784129119031604	0.4268298860278599	27.993779160186627	11	0	NA	NA	NA	27.993779160186627	11	0	21.428571428571427	1	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019894	Chromosome_8A	17519	7	368	37.78754495119585	0.5898866925715724	92.9589013016296	336	0.9732142857142857	95.9264126149803	35	1	92.61448125977047	301	0.9700996677740864	93.47229840921558	20	1	methylated (>=50%)	P38411	Guanine nucleotide-binding protein G(q) subunit alpha (Guanine nucleotide-binding protein alpha-q)	adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]	hit with GO BP
GN011674	Chromosome_8A	1149	3	21	34.29068755439513	0.6217532467532467	93.17829457364341	15	1	93.46289752650176	12	1	91.13924050632912	3	1	93.76435838529702	32	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019875	Chromosome_8A	195	1	5	49.743589743589745	0.7523148148148148	0.2915451895043732	5	0	0.2915451895043732	5	0	NA	NA	NA	0.6758583400919167	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019876	Chromosome_8A	237	1	8	51.0548523206751	0.5851851851851851	0.45454545454545453	8	0	0.45454545454545453	8	0	NA	NA	NA	0.7069219440353461	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN018694	Chromosome_8A	159	1	2	50.943396226415096	0.38405797101449274	NA	0	NA	NA	NA	NA	NA	NA	NA	1.2411347517730495	17	0	NA	NA	NA	NA	no Swiss-Prot hit
GN018695	Chromosome_8A	446	1	12	52.01793721973094	0.5365413533834587	1.3513513513513513	7	0	1.3513513513513513	7	0	NA	NA	NA	NA	NA	NA	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001785	Chromosome_8A	7602	10	71	34.333070244672456	0.317602718566574	23.645970937912814	23	0.08695652173913043	23.03921568627451	5	0	23.869801084990957	18	0.1111111111111111	47.02627939142462	17	0.4117647058823529	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001279	Chromosome_8A	243	1	10	49.794238683127574	0.6650246305418719	45.90163934426229	10	0.7	45.90163934426229	10	0.7	NA	NA	NA	75.7002271006813	31	0.9354838709677419	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN001280	Chromosome_8A	783	1	29	48.91443167305236	0.6364069506726457	73.02052785923753	29	0.9310344827586207	73.02052785923753	29	0.9310344827586207	NA	NA	NA	66.55231560891939	39	0.8717948717948718	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020253	Chromosome_8A	216	1	15	50.46296296296296	1.1621233859397417	0.5303030303030303	15	0	0.5303030303030303	15	0	NA	NA	NA	1.7384871462918439	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019879	Chromosome_8A	762	1	11	39.37007874015748	0.37927601809954753	50	2	0.5	50	2	0.5	NA	NA	NA	70.81967213114754	26	0.7692307692307693	NA	NA	NA	NA	no Swiss-Prot hit
GN019878	Chromosome_8A	219	1	4	56.16438356164384	0.42524271844660194	1.0204081632653061	4	0	1.0204081632653061	4	0	NA	NA	NA	0.6319702602230484	58	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019877	Chromosome_8A	156	1	3	52.56410256410256	0.5217391304347826	1.183431952662722	3	0	1.183431952662722	3	0	NA	NA	NA	0.5852842809364549	73	0	NA	NA	NA	NA	no Swiss-Prot hit
GN019888	Chromosome_8A	33867	13	430	35.69846753476836	0.40109349599530614	82.82916303581061	417	0.9136690647482014	90.69115815691158	62	1	81.62014650260927	355	0.8985915492957747	75.43103448275862	28	0.8214285714285714	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001339	Chromosome_8A	309	1	12	47.57281553398058	0.687175685693106	NA	0	NA	NA	NA	NA	NA	NA	NA	77.00258397932816	17	0.9411764705882353	NA	NA	NA	NA	no Swiss-Prot hit
GN019889	Chromosome_8A	6130	5	153	37.73246329526917	0.7120406685160638	62.01894257283299	153	0.7843137254901961	65.6198347107438	48	0.75	60.54720486404324	105	0.8	0.6362058993637941	34	0	methylated (>=50%)	Q92753	Nuclear receptor ROR-beta (Nuclear receptor RZR-beta) (Nuclear receptor subfamily 1 group F member 2) (Retinoid-related orphan receptor-beta)	amacrine cell differentiation [GO:0035881]; cellular response to retinoic acid [GO:0071300]; eye photoreceptor cell development [GO:0042462]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of osteoblast differentiation [GO:0045668]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of circadian rhythm [GO:0042752]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]; retina development in camera-type eye [GO:0060041]; retinal cone cell development [GO:0046549]; retinal rod cell development [GO:0046548]	hit with GO BP
GN019890	Chromosome_8A	297	1	8	45.11784511784512	0.6	75.50776583034647	8	1	75.50776583034647	8	1	NA	NA	NA	93.2935393258427	77	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019891	Chromosome_8A	32694	8	633	37.578760628861566	0.5485621506545713	84.04401190595632	553	0.972875226039783	91.78593652769135	44	1	83.6042977309677	509	0.9705304518664047	89.3097643097643	78	1	methylated (>=50%)	Q5E9Y6	Exopolyphosphatase PRUNE1 (EC 3.6.1.14) (EC 3.6.1.25)	NA	hit, no GO BP
GN019880	Chromosome_8A	2488	2	94	43.20739549839228	0.8217106557607443	0.40396621373485125	87	0	0.545950864422202	48	0	0.3078817733990148	39	0	1.2701100762066047	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019883	Chromosome_8A	10449	10	280	36.23313235716336	0.816511976887653	0.5477742338094578	280	0	0.4624591947769314	72	0	0.5769588684161548	208	0	0.9844755774327906	51	0	unmethylated (<10%)	Q9Y6R7	IgGFc-binding protein (Fcgamma-binding protein antigen) (FcgammaBP)	NA	hit, no GO BP
GN003427	Chromosome_8A	1101	2	13	35.87647593097184	0.36696236283458106	0	1	0	0	1	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019884	Chromosome_8A	4807	5	114	38.13189099230289	0.6578607442977191	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019885	Chromosome_8A	5614	3	177	40.399002493765586	0.7852015042192576	0.6663113006396588	109	0	0.7570295602018745	93	0	0.40899795501022496	16	0	NA	NA	NA	unmethylated (<10%)	Q3V3A7	RING finger protein 207	positive regulation of gene expression [GO:0010628]; positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential [GO:1905026]; regulation of cardiac muscle contraction [GO:0055117]; regulation of heart looping [GO:1901207]	hit with GO BP
GN002722	Chromosome_8A	1101	2	13	35.87647593097184	0.36696236283458106	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019914	Chromosome_8A	14865	7	358	34.873864783047424	0.7921482257503435	0.7867517605633803	336	0	0.544069640914037	20	0	0.7996754940024338	316	0	0.49800796812749004	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019915	Chromosome_8A	1968	1	67	41.514227642276424	0.7903045995612615	0.14094432699083861	60	0	0.14094432699083861	60	0	NA	NA	NA	0.6167400881057269	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019916	Chromosome_8A	1896	1	65	41.561181434599156	0.7939698492462312	1.1695906432748537	59	0	1.1695906432748537	59	0	NA	NA	NA	0.5176876617773943	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019917	Chromosome_8A	5497	5	152	37.56594506094233	0.7838241474543708	0.5300353356890459	152	0	0.4767580452920143	66	0	0.5661903478026422	86	0	0.513874614594039	54	0	unmethylated (<10%)	A2AJ76	Hemicentin-2	homophilic cell-cell adhesion [GO:0007156]; synapse organization [GO:0050808]	hit with GO BP
GN001352	Chromosome_8A	231	1	9	42.42424242424242	0.8716981132075472	0.3766478342749529	9	0	0.3766478342749529	9	0	NA	NA	NA	2.9442508710801394	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019998	Chromosome_8A	3719	5	37	34.498521107824686	0.3357136932092651	10.424202564945741	37	0	14.814814814814815	8	0	8.830121021963246	29	0	4.168722249629995	25	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010889	Chromosome_8A	1571	2	44	42.838956078930615	0.6104742559392388	28.386585687879588	44	0.045454545454545456	24.780610112829084	25	0	34.576757532281206	19	0.10526315789473684	2.7965719440685612	47	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019921	Chromosome_8A	443	1	60	62.753950338600454	1.3759900605684112	1.5521064301552105	35	0	1.5521064301552105	35	0	NA	NA	NA	5.1640458163463405	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021437	Chromosome_9A	873	1	62	65.17754868270332	0.6687175685693106	4.9800796812749	30	0	4.9800796812749	30	0	NA	NA	NA	21.96969696969697	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021438	Chromosome_9A	237	1	15	54.0084388185654	0.8713235294117647	1.0135135135135136	12	0	1.0135135135135136	12	0	NA	NA	NA	2.244668911335578	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004831	Chromosome_9A	211	1	16	50.23696682464455	1.2022792022792024	0.7009345794392523	16	0	0.7009345794392523	16	0	NA	NA	NA	0.46253469010175763	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021439	Chromosome_9A	1434	1	17	43.23570432357043	0.2588887472919587	6.089743589743589	12	0	6.089743589743589	12	0	NA	NA	NA	0.8625063419583967	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021440	Chromosome_9A	312	1	15	44.87179487179487	0.962171052631579	0.1692047377326565	15	0	0.1692047377326565	15	0	NA	NA	NA	0.7299270072992701	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013513	Chromosome_9A	271	1	2	40.59040590405904	0.1797082228116711	0	2	0	0	2	0	NA	NA	NA	0.5332040717401842	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021441	Chromosome_9A	419	2	6	36.75417661097852	0.44315177154944474	53.225806451612904	6	0.5	57.92079207920792	5	0.6	32.608695652173914	1	0	70.65767284991568	46	0.782608695652174	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021183	Chromosome_9A	760	2	6	37.63157894736842	0.2235294117647059	83.33333333333333	1	1	83.33333333333333	1	1	NA	NA	NA	82.14285714285714	1	1	NA	NA	NA	NA	no Swiss-Prot hit
GN021436	Chromosome_9A	2134	7	27	34.301780693533274	0.43247990272242115	0.6913890634820867	27	0	0.9202453987730062	17	0	0.3262642740619902	10	0	0.4219409282700422	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002914	Chromosome_9A	1021	3	19	34.6718903036239	0.6195190495960144	0.30303030303030304	19	0	0.8174386920980926	6	0	0.1049317943336831	13	0	0.9152642456451137	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021435	Chromosome_9A	273	1	21	51.282051282051285	1.173832923832924	0.3831417624521073	21	0	0.3831417624521073	21	0	NA	NA	NA	0.5392652510953826	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021434	Chromosome_9A	498	1	22	46.5863453815261	0.8171850525844708	0.8356545961002786	22	0	0.8356545961002786	22	0	NA	NA	NA	0.7205764611689351	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021430	Chromosome_9A	1059	3	18	36.07176581680831	0.5249504296100462	91.9104991394148	14	1	90.46052631578948	11	1	93.50180505415162	3	1	85.58100084817642	53	0.9811320754716981	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021429	Chromosome_9A	15192	11	176	35.367298578199055	0.3728924845301733	62.20347917764892	136	0.6617647058823529	84.33673469387755	39	0.8974358974358975	54.495380241648895	97	0.5670103092783505	70.25495750708215	25	0.68	methylated (>=50%)	Q9NFT7	Hexokinase-2 (EC 2.7.1.1) (Hexokinase testis)	canonical glycolysis [GO:0061621]; intracellular glucose homeostasis [GO:0001678]	hit with GO BP
GN021431	Chromosome_9A	3650	3	30	36.57534246575342	0.2467138614887548	86.7844522968198	30	0.9666666666666667	88.4920634920635	5	1	86.41444539982803	25	0.96	2.3406374501992033	41	0	methylated (>=50%)	Q6NUA7	Nucleotide exchange factor SIL1	NA	hit, no GO BP
GN021432	Chromosome_9A	1281	2	1	45.042935206869636	0.015407375333766328	76.47058823529412	1	1	76.47058823529412	1	1	NA	NA	NA	78.27476038338658	42	0.9523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN021433	Chromosome_9A	1662	1	42	40.85439229843562	0.6085364577884717	7.905497501135847	42	0	7.905497501135847	42	0	NA	NA	NA	11.381753764393268	55	0	unmethylated (<10%)	Q64127	Transcription intermediary factor 1-alpha (TIF1-alpha) (EC 2.3.2.27) (E3 ubiquitin-protein ligase Trim24) (RING-type E3 ubiquitin transferase TIF1-alpha) (Tripartite motif-containing protein 24)	calcium ion homeostasis [GO:0055074]; cellular response to estrogen stimulus [GO:0071391]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of DNA-templated transcription [GO:0045892]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; protein autophosphorylation [GO:0046777]; protein catabolic process [GO:0030163]; protein phosphorylation [GO:0006468]; protein ubiquitination [GO:0016567]; regulation of apoptotic process [GO:0042981]; regulation of protein stability [GO:0031647]; regulation of signal transduction by p53 class mediator [GO:1901796]; regulation of vitamin D receptor signaling pathway [GO:0070562]; response to peptide hormone [GO:0043434]	hit with GO BP
GN021427	Chromosome_9A	2453	4	57	35.548308194048104	0.7362875197472354	9.857877230117932	57	0	10.683760683760683	28	0	9.405708937763219	29	0	11.864406779661017	48	0	unmethylated (<10%)	Q6NUA7	Nucleotide exchange factor SIL1	NA	hit, no GO BP
GN021426	Chromosome_9A	4733	5	157	35.939150644411576	1.0325014936986758	0.8805031446540881	157	0	0.3994673768308921	77	0	1.1015911872705018	80	0	0.5964807634953773	47	0	unmethylated (<10%)	Q8C8H8	Kyphoscoliosis peptidase (EC 3.4.-.-)	muscle organ development [GO:0007517]; neuromuscular junction development [GO:0007528]	hit with GO BP
GN021425	Chromosome_9A	3166	5	89	37.839545167403664	0.7853561325027524	0.6349206349206349	82	0	0.6246096189881324	34	0	0.6437768240343348	48	0	0.38684719535783363	42	0	unmethylated (<10%)	Q8IU80	Transmembrane protease serine 6 (EC 3.4.21.-) (Matriptase-2)	collagen catabolic process [GO:0030574]; extracellular matrix disassembly [GO:0022617]; intracellular iron ion homeostasis [GO:0006879]; membrane protein proteolysis [GO:0033619]; multicellular organismal-level iron ion homeostasis [GO:0060586]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein processing [GO:0016485]; self proteolysis [GO:0097264]	hit with GO BP
GN021424	Chromosome_9A	8556	12	221	36.6643291257597	0.77221604191068	1.3741739221651106	219	0	0.8551576696953501	43	0	1.5009135995823544	176	0	0.4158004158004158	57	0	unmethylated (<10%)	P19367	Hexokinase-1 (EC 2.7.1.1) (Brain form hexokinase) (Hexokinase type I) (HK I) (Hexokinase-A)	canonical glycolysis [GO:0061621]; carbohydrate phosphorylation [GO:0046835]; fructose 6-phosphate metabolic process [GO:0006002]; GDP-mannose biosynthetic process [GO:0009298]; glucose 6-phosphate metabolic process [GO:0051156]; glucose metabolic process [GO:0006006]; glycolytic process [GO:0006096]; intracellular glucose homeostasis [GO:0001678]; maintenance of protein location in mitochondrion [GO:0072656]; mannose metabolic process [GO:0006013]; positive regulation of cytokine production involved in immune response [GO:0002720]; positive regulation of interleukin-1 beta production [GO:0032731]; protein localization to mitochondrion [GO:0070585]	hit with GO BP
GN021423	Chromosome_9A	2524	3	33	36.64817749603804	0.3905728326518363	92.31658001155401	33	1	95.24838012958963	7	1	91.24605678233438	26	1	60.50836949783013	27	0.5555555555555556	methylated (>=50%)	Q0VD26	MORN repeat-containing protein 4 (Retinophilin)	response to axon injury [GO:0048678]	hit with GO BP
GN021422	Chromosome_9A	13043	7	170	34.194587134861614	0.4512367184108757	72.99598393574297	169	0.7988165680473372	84.91965389369592	35	0.8857142857142857	71.2149187592319	134	0.7761194029850746	60.50836949783013	27	0.5555555555555556	methylated (>=50%)	G5EGQ5	Mblk-1-related factor 1	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN021421	Chromosome_9A	481	2	8	37.00623700623701	0.4947923363764948	2.6402640264026402	8	0	2.6402640264026402	8	0	NA	NA	NA	2.781161185546082	49	0	unmethylated (<10%)	P62811	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1)	antibacterial humoral response [GO:0019731]; innate immune response [GO:0045087]	hit with GO BP
GN021420	Chromosome_9A	12843	21	311	35.568013703963246	0.7662042592129003	1.7009517961314093	310	0	1.7501988862370723	87	0	1.6861115550583348	223	0	0.33967391304347827	47	0	unmethylated (<10%)	P62811	WAP four-disulfide core domain protein 18 (Extracellular peptidase inhibitor) (Protein WDNM1)	antibacterial humoral response [GO:0019731]; innate immune response [GO:0045087]	hit with GO BP
GN021419	Chromosome_9A	3859	4	40	35.086810054418244	0.3388654724271163	18.040621266427717	19	0	0	2	0	18.85143570536829	17	0	8.422138191818494	31	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN021418	Chromosome_9A	2191	3	17	36.64993153811045	0.2316038850406039	85.60090702947846	17	1	85.22727272727273	6	1	85.97285067873302	11	1	80.35714285714286	11	1	methylated (>=50%)	Q8VC85	U6 snRNA-associated Sm-like protein LSm1	histone mRNA catabolic process [GO:0071044]; negative regulation of neuron differentiation [GO:0045665]; stem cell population maintenance [GO:0019827]	hit with GO BP
GN021417	Chromosome_9A	1416	1	7	36.793785310734464	0.1493265841091928	87.04103671706264	7	1	87.04103671706264	7	1	NA	NA	NA	21.60080375083724	46	0.21739130434782608	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021416	Chromosome_9A	9972	7	210	33.854793421580425	0.7349483723089849	0.860450563204005	208	0	0.5300353356890459	54	0	0.9315589353612167	154	0	0.2916302128900554	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021415	Chromosome_9A	8042	8	213	35.48868440686397	0.849969036929416	4.9953917050691246	213	0.03286384976525822	0.28506271379703535	86	0	7.245982021247617	127	0.05511811023622047	0.6811145510835913	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021414	Chromosome_9A	7608	12	208	35.76498422712934	0.8555579824699886	0.700997573469938	207	0	0.6246096189881324	66	0	0.7318611987381703	141	0	0.35335689045936397	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021413	Chromosome_9A	12490	11	84	35.196156925540436	0.2223910921468066	84.83954260420509	84	0.9880952380952381	87.83068783068784	13	1	84.35490784397771	71	0.9859154929577465	95.11616880037933	29	1	methylated (>=50%)	Q60HD5	Protoporphyrinogen oxidase (PPO) (EC 1.3.3.4)	heme B biosynthetic process [GO:0006785]; heme biosynthetic process [GO:0006783]; porphyrin-containing compound biosynthetic process [GO:0006779]	hit with GO BP
GN021412	Chromosome_9A	5620	5	48	35.23131672597865	0.27991648992026696	76.34719710669077	48	0.8541666666666666	82.23429014740108	19	0.9473684210526315	71.2059620596206	29	0.7931034482758621	72.80701754385964	9	0.7777777777777778	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021411	Chromosome_9A	618	1	10	44.01294498381877	0.34228745499861535	3.7704918032786887	8	0	3.7704918032786887	8	0	NA	NA	NA	2.204724409448819	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002753	Chromosome_9A	920	2	17	36.84782608695652	0.5468913910063641	53.333333333333336	3	0.6666666666666666	53.333333333333336	3	0.6666666666666666	NA	NA	NA	63.013698630136986	13	0.8461538461538461	NA	NA	NA	NA	no Swiss-Prot hit
GN021410	Chromosome_9A	765	1	13	39.869281045751634	0.4389565677966102	88.41463414634147	13	1	88.41463414634147	13	1	NA	NA	NA	1.4175257731958764	59	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021409	Chromosome_9A	5294	6	58	32.41405364563657	0.4175743176808015	81.78398710370769	53	0.9245283018867925	70.75471698113208	13	0.7692307692307693	84.53020134228188	40	0.975	63.84778012684989	55	0.6727272727272727	methylated (>=50%)	Q9H8W3	Protein FAM204A	NA	hit, no GO BP
GN021408	Chromosome_9A	17855	4	412	35.435452254270515	0.7357141385537987	1.0535070695869144	405	0	0.6598482349059717	55	0	1.1176186126484338	350	0	0.39486673247778875	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021407	Chromosome_9A	1269	3	33	37.5886524822695	0.7382329090716779	0.4653868528214078	33	0	0.5621925509486999	29	0	0	4	0	0.5167958656330749	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020436	Chromosome_9A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN021404	Chromosome_9A	891	1	1	30.41526374859708	0.05279061500177746	2.5	1	0	2.5	1	0	NA	NA	NA	1.2583562721195438	47	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021405	Chromosome_9A	6111	2	204	38.24251350024546	0.9130301041752112	0.9415087678004002	204	0	0.9166891345376112	102	0	0.960735171261487	102	0	0.585865983156353	52	0	unmethylated (<10%)	P36633	Diamine oxidase [copper-containing] (Diamine oxidase) (EC 1.4.3.22) (Amiloride-binding protein 1) (Amine oxidase copper domain-containing protein 1) (Histaminase)	putrescine metabolic process [GO:0009445]	hit with GO BP
GN020020	Chromosome_9A	572	2	11	45.45454545454545	0.39795079375118586	13.120567375886525	7	0	11.764705882352942	6	0	18.0327868852459	1	0	2.891566265060241	65	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011095	Chromosome_9A	2282	5	33	35.18843120070114	0.47083317702667216	38.62283199585814	33	0.30303030303030304	36.63883089770355	16	0.3125	40.57524396507447	17	0.29411764705882354	55.80611715914982	65	0.5692307692307692	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN011096	Chromosome_9A	64482	21	724	33.865264725039545	0.39359831731861605	78.01810976554717	720	0.9111111111111111	77.55503144654088	47	0.9361702127659575	78.04574780058651	673	0.9093610698365527	0.5009741163373226	65	0	methylated (>=50%)	Q95J53	BTB/POZ domain-containing protein 16	NA	hit, no GO BP
GN021399	Chromosome_9A	15474	11	192	34.17345224247124	0.42653466284686353	73.91268668964385	191	0.8691099476439791	66.49411764705883	41	0.8048780487804879	75.47957459497069	150	0.8866666666666667	2.0882771713336497	55	0	methylated (>=50%)	Q0P5C0	Lipase maturation factor 1 (Transmembrane protein 112)	protein maturation [GO:0051604]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN021400	Chromosome_9A	1731	2	38	35.75967648757943	0.6934218848829855	1.3872135102533172	38	0	1.3412816691505216	17	0	1.4184397163120568	21	0	0.27744748315497425	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021402	Chromosome_9A	11385	7	350	37.70750988142292	0.864876350735115	2.0633272774461457	350	0	1.4511873350923483	79	0	2.2132471728594507	271	0	0.411381556393555	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021397	Chromosome_9A	6493	10	125	35.74618820267981	0.6109793736826257	73.29053448790684	126	0.8015873015873016	67.72247360482655	30	0.8	74.66492926284438	96	0.8020833333333334	67.97196035774716	52	0.6346153846153846	methylated (>=50%)	A0A7J6K629	Apicoplast pyruvate carrier 1 (APC1) (Apicoplast monocarboxylate transporter 1) (AMT1) (Hypothetical apicoplast protein 3) (HAP3)	amino acid transmembrane transport [GO:0003333]; pyruvate transmembrane transport [GO:1901475]	hit with GO BP
GN021394	Chromosome_9A	9046	6	123	35.2973690028742	0.4394762266261471	84.3198191835005	123	0.943089430894309	91.94865810968494	18	1	83.26904532304725	105	0.9333333333333333	57.1658615136876	20	0.65	methylated (>=50%)	Q05B50	Probable tRNA(His) guanylyltransferase (EC 2.7.7.79) (tRNA-histidine guanylyltransferase)	response to oxidative stress [GO:0006979]; stress-induced mitochondrial fusion [GO:1990046]; tRNA modification [GO:0006400]; tRNA processing [GO:0008033]	hit with GO BP
GN021393	Chromosome_9A	22397	13	370	35.893199982140466	0.5130937543147938	92.69767953370724	366	1	94.8046875	70	1	92.47946923419232	296	1	4.591629418935392	31	0.03225806451612903	methylated (>=50%)	E9PVX6	Proliferation marker protein Ki-67 (Antigen identified by monoclonal antibody Ki-67 homolog) (Antigen KI-67 homolog) (Antigen Ki67 homolog)	cell population proliferation [GO:0008283]; cholangiocyte proliferation [GO:1990705]; chromosome segregation [GO:0007059]; epithelial cell proliferation [GO:0050673]; hepatocyte proliferation [GO:0072574]; meiotic cell cycle [GO:0051321]; regulation of chromatin organization [GO:1902275]; regulation of mitotic nuclear division [GO:0007088]	hit with GO BP
GN021392	Chromosome_9A	810	1	36	42.96296296296296	0.967741935483871	0.7352941176470589	36	0	0.7352941176470589	36	0	NA	NA	NA	0.819000819000819	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021391	Chromosome_9A	18753	7	567	38.39385698288274	0.8205126958584714	2.0463049579045838	563	0	0.5598320503848845	93	0	2.2326519870164048	470	0	0.777289624873268	45	0	unmethylated (<10%)	Q9Y115	UNC93-like protein	inorganic ion homeostasis [GO:0098771]; regulation of muscle contraction [GO:0006937]; regulation of potassium ion transport [GO:0043266]; renal system process [GO:0003014]; transmembrane transport [GO:0055085]	hit with GO BP
GN004909	Chromosome_9A	884	3	23	46.945701357466064	0.47642703158684035	2.272727272727273	17	0	2.4038461538461537	16	0	0	1	0	13.753424657534246	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021389	Chromosome_9A	7835	7	118	35.35417996171027	0.4832059373080893	74.3828853538124	117	0.811965811965812	45.38638985005767	27	0.5925925925925926	83.42929111191076	90	0.8777777777777778	0.5937234944868532	87	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021388	Chromosome_9A	7615	6	156	37.3473407747866	0.5896396861449514	81.47861642170406	151	0.8543046357615894	61.229050279329606	15	0.6	83.70125091979396	136	0.8823529411764706	68.79432624113475	26	0.8076923076923077	methylated (>=50%)	Q9BX73	TM2 domain-containing protein 2 (Beta-amyloid-binding protein-like protein 1) (BBP-like protein 1)	NA	hit, no GO BP
GN021387	Chromosome_9A	1095	1	53	44.5662100456621	0.9761163905474729	0.2331002331002331	51	0	0.2331002331002331	51	0	NA	NA	NA	0.5477576172543649	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021386	Chromosome_9A	5633	10	67	35.78909994674241	0.3715498018754153	66.94013977514433	66	0.7272727272727273	69.38388625592417	50	0.78	62.57408975444539	16	0.5625	10.102843315184513	20	0.15	methylated (>=50%)	Q32TG3	EF-hand domain-containing family member C2	regulation of dendrite morphogenesis [GO:0048814]	hit with GO BP
GN021381	Chromosome_9A	15359	5	193	35.24317989452438	0.4047976439889956	80.40192223678463	193	0.8860103626943006	27.73207990599295	19	0.2631578947368421	84.63281102510855	174	0.9540229885057471	0.9428729894620078	25	0	methylated (>=50%)	Q96IR7	4-hydroxyphenylpyruvate dioxygenase-like protein (HPD-like protein) (HPDL) (EC 1.13.11.46) (Glyoxalase domain-containing protein 1)	aromatic amino acid metabolic process [GO:0009072]	hit with GO BP
GN021382	Chromosome_9A	5278	5	75	35.94164456233422	0.4440458482806895	92.3343675853258	74	1	91.6289592760181	21	1	92.55959547315194	53	1	67.68377253814147	46	0.7608695652173914	methylated (>=50%)	B1H2T2	Divergent protein kinase domain 2A (Deleted in autism protein 1 homolog)	cardiac muscle cell proliferation [GO:0060038]; regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051896]	hit with GO BP
GN002883	Chromosome_9A	756	1	36	46.560846560846564	0.8938811705586758	89.34426229508196	6	1	89.34426229508196	6	1	NA	NA	NA	57.45814307458143	24	0.625	methylated (>=50%)	D3YZI9	PiggyBac transposable element-derived protein 5 (EC 3.1.-.-) (PiggyBac transposase 5)	non-replicative DNA transposition [GO:0098038]	hit with GO BP
GN021383	Chromosome_9A	945	3	31	39.682539682539684	0.868	0.3379647014645137	31	0	0.3476749239461104	27	0	0.27624309392265195	4	0	1.1184755592377795	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021384	Chromosome_9A	36259	18	530	34.82721531206045	0.4820568600867244	83.08456346375459	517	0.9032882011605415	77.14113389626056	72	0.8611111111111112	83.67944461213402	445	0.9101123595505618	1.1583011583011582	55	0	methylated (>=50%)	Q5SQY2	Biorientation of chromosomes in cell division protein 1 (Biorientation defective protein 1) (Protein FAM44B)	NA	hit, no GO BP
GN003700	Chromosome_9A	756	1	24	41.402116402116405	0.740813326800588	0	7	0	0	7	0	NA	NA	NA	1.8808777429467085	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021385	Chromosome_9A	729	2	34	44.99314128943759	0.9265101674641149	0.3058103975535168	34	0	0.45724737082761774	25	0	0.07092198581560284	9	0	0.5409705648369133	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021379	Chromosome_9A	1563	1	73	42.16250799744082	1.0509837515198408	0.8710078805474907	73	0	0.8710078805474907	73	0	NA	NA	NA	0.6675567423230975	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021378	Chromosome_9A	6960	4	219	38.2183908045977	0.8743417656169334	82.76944322390308	219	0.908675799086758	48.41772151898734	13	0.5384615384615384	84.18850905287927	206	0.9320388349514563	49.51067615658363	43	0.4418604651162791	methylated (>=50%)	Q24JY4	Zinc finger HIT domain-containing protein 1 (p18 Hamlet)	calcium ion homeostasis [GO:0055074]; chromatin remodeling [GO:0006338]; heart process [GO:0003015]; hematopoietic stem cell homeostasis [GO:0061484]; intestinal stem cell homeostasis [GO:0036335]; muscle cell differentiation [GO:0042692]; positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]; positive regulation of lymphoid progenitor cell differentiation [GO:1905458]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN021377	Chromosome_9A	6868	5	102	34.37682003494467	0.504100961808309	88.72296601441812	100	0.98	81.74157303370787	5	1	89.17733089579525	95	0.9789473684210527	55.28776978417266	38	0.5526315789473685	methylated (>=50%)	A4IHF8	Protein DPCD	NA	hit, no GO BP
GN021376	Chromosome_9A	7508	6	261	39.91742141715503	0.8731352860030156	1.0069308225447888	212	0	0.43440486533449174	23	0	1.1083743842364533	189	0	14.110070257611241	40	0	unmethylated (<10%)	Q0P5B7	Deacylase AADAC (EC 3.-.-.-) (50 kDa microsomal esterase/N-deacetylase) (Acetylesterase AADAC) (EC 3.1.1.6) (Arylacetamide deacetylase) (Arylalkyl acylamidase AADAC) (EC 3.5.1.76) (Diacylglycerol lipase activity AADAC) (EC 3.1.1.79)	positive regulation of triglyceride catabolic process [GO:0010898]	hit with GO BP
GN021375	Chromosome_9A	5400	5	157	37.46296296296296	0.8286563803022573	0.7622326038849274	156	0	0.8020532563362207	66	0	0.7374925254135938	90	0	0.4852686308492201	68	0	unmethylated (<10%)	Q8NCK7	Monocarboxylate transporter 11 (MCT 11) (Solute carrier family 16 member 11)	lipid metabolic process [GO:0006629]	hit with GO BP
GN021374	Chromosome_9A	50358	32	791	35.12053695539934	0.5100692088077353	84.89136045802243	630	0.9380952380952381	88.15940366972477	57	0.9298245614035088	84.60005111167902	573	0.9389179755671903	1.5647226173541964	54	0	methylated (>=50%)	O35382	Exocyst complex component 4 (Exocyst complex component Sec8)	chemical synaptic transmission [GO:0007268]; cilium assembly [GO:0060271]; establishment of cell polarity [GO:0030010]; exocytosis [GO:0006887]; Golgi to plasma membrane transport [GO:0006893]; membrane biogenesis [GO:0044091]; membrane fission [GO:0090148]; mitotic cytokinesis [GO:0000281]; oligodendrocyte differentiation [GO:0048709]; paraxial mesoderm formation [GO:0048341]; positive regulation of calcium-mediated signaling [GO:0050850]; protein localization to ciliary membrane [GO:1903441]; protein targeting to membrane [GO:0006612]; protein transmembrane transport [GO:0071806]; regulation of neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0098696]; regulation of protein transport [GO:0051223]; vesicle docking involved in exocytosis [GO:0006904]; vesicle tethering involved in exocytosis [GO:0090522]	hit with GO BP
GN021373	Chromosome_9A	576	1	19	41.666666666666664	0.760845383759733	0.28328611898017	19	0	0.28328611898017	19	0	NA	NA	NA	0.6481814908174289	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021372	Chromosome_9A	13612	3	379	36.42374375550985	0.8397282892483746	1.5394724490753777	372	0	0.45351473922902497	20	0	1.5863689776733254	352	0	0.3678402522333158	31	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021371	Chromosome_9A	11467	4	269	35.64140577308799	0.7390733164080433	0.6067695006944952	269	0	0.6304824561403509	87	0	0.59814574818064	182	0	0.8534850640113798	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021370	Chromosome_9A	11838	7	210	36.213887480993414	0.5415269090501943	86.87618576260002	209	0.9712918660287081	84.89096573208722	11	1	86.98719623726156	198	0.9696969696969697	57.57627118644068	52	0.5769230769230769	methylated (>=50%)	A5PLK2	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (EC 3.1.3.-) (EC 3.6.1.1)	phosphate-containing compound metabolic process [GO:0006796]	hit with GO BP
GN021369	Chromosome_9A	13960	6	253	35.522922636103154	0.5748373490308974	81.19256251335756	205	0.975609756097561	90.11857707509881	8	1	80.85876875323332	197	0.9746192893401016	87.60117733627668	56	0.9821428571428571	methylated (>=50%)	Q9BVG4	Protein PBDC1 (Polysaccharide biosynthesis domain-containing protein 1)	'de novo' cotranslational protein folding [GO:0051083]	hit with GO BP
GN021368	Chromosome_9A	6683	9	85	34.789765075564866	0.42326021873281605	68.62220523600229	85	0.6941176470588235	63.058328954282715	32	0.59375	71.8018018018018	53	0.7547169811320755	21.113602391629296	39	0.07692307692307693	methylated (>=50%)	Q9JID1	Programmed cell death protein 4 (Death up-regulated gene protein)	BMP signaling pathway [GO:0030509]; cellular response to lipopolysaccharide [GO:0071222]; epithelial to mesenchymal transition involved in cardiac fibroblast development [GO:0060940]; negative regulation of apoptotic process [GO:0043066]; negative regulation of cytokine production involved in inflammatory response [GO:1900016]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of JUN kinase activity [GO:0043508]; negative regulation of myofibroblast differentiation [GO:1904761]; negative regulation of vascular associated smooth muscle cell differentiation [GO:1905064]; negative regulation of vascular associated smooth muscle cell proliferation [GO:1904706]; positive regulation of endothelial cell apoptotic process [GO:2000353]; positive regulation of inflammatory response [GO:0050729]; positive regulation of non-canonical NF-kappaB signal transduction [GO:1901224]; positive regulation of smooth muscle cell apoptotic process [GO:0034393]; positive regulation of vascular associated smooth muscle cell apoptotic process [GO:1905461]; regulation of protein metabolic process [GO:0051246]; response to alkaloid [GO:0043279]; response to hormone [GO:0009725]	hit with GO BP
GN021367	Chromosome_9A	32955	35	345	33.98573812774996	0.3626470514779411	64.29184161813174	345	0.6898550724637681	74.12333736396614	74	0.9324324324324325	62.03508382369268	271	0.6236162361623616	74.4846541456711	27	0.7407407407407407	methylated (>=50%)	F7AEX0	UV-stimulated scaffold protein A	protein ubiquitination [GO:0016567]; response to UV [GO:0009411]; transcription-coupled nucleotide-excision repair [GO:0006283]	hit with GO BP
GN021364	Chromosome_9A	797	2	25	41.90715181932246	0.7170103278275577	0.8398950131233596	25	0	0.8398950131233596	25	0	NA	NA	NA	0.9371884346959123	77	0	unmethylated (<10%)	P49016	Demethylmenaquinone methyltransferase (EC 2.1.1.163)	menaquinone biosynthetic process [GO:0009234]	hit with GO BP
GN021361	Chromosome_9A	13662	11	123	36.36363636363637	0.2725127675542925	78.57607705323441	121	0.8842975206611571	79.2258064516129	42	0.8333333333333334	78.29413960432997	79	0.9113924050632911	48.934108527131784	15	0.4	methylated (>=50%)	Q9Y2H2	Phosphatidylinositide 4-phosphatase SAC2 (EC 3.1.3.-) (Inositol polyphosphate 5-phosphatase F) (Sac domain-containing inositol phosphatase 2) (Sac domain-containing phosphoinositide 4-phosphatase 2) (hSAC2)	adult locomotory behavior [GO:0008344]; cardiac muscle hypertrophy in response to stress [GO:0014898]; clathrin-dependent endocytosis [GO:0072583]; negative regulation of axon regeneration [GO:0048681]; phosphatidylinositol biosynthetic process [GO:0006661]; phosphatidylinositol catabolic process [GO:0031161]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of receptor recycling [GO:0001921]; regulation of cell motility [GO:2000145]; regulation of endocytic recycling [GO:2001135]	hit with GO BP
GN021362	Chromosome_9A	56981	35	756	34.429020199715694	0.4497210574211304	28.87930034565152	751	0.255659121171771	65.85812356979405	79	0.7468354430379747	24.707643854712547	672	0.19791666666666666	0.5652173913043478	63	0	sparse (10-50%)	P24014	Protein slit (dSlit) (Slit-FL) [Cleaved into: Protein slit N-product (Slit-N); Protein slit C-product (Slit-C)]	axon guidance [GO:0007411]; axon midline choice point recognition [GO:0016199]; dendrite morphogenesis [GO:0048813]; digestive tract mesoderm development [GO:0007502]; embryonic heart tube development [GO:0035050]; epithelial cell migration, open tracheal system [GO:0007427]; glial cell migration [GO:0008347]; gonad development [GO:0008406]; induction of negative chemotaxis [GO:0050929]; mesoderm migration involved in gastrulation [GO:0007509]; mesodermal cell migration [GO:0008078]; neuron differentiation [GO:0030182]; neuron migration [GO:0001764]; outflow tract morphogenesis [GO:0003151]; positive regulation of cell migration [GO:0030335]; positive regulation of cell-cell adhesion [GO:0022409]; regulation of epithelial cell migration [GO:0010632]; regulation of epithelial cell migration, open tracheal system [GO:2000274]; Roundabout signaling pathway [GO:0035385]; salivary gland boundary specification [GO:0007432]; synaptic target inhibition [GO:0016201]	hit with GO BP
GN021363	Chromosome_9A	1338	1	49	40.43348281016443	0.8962679425837321	0.32608695652173914	49	0	0.32608695652173914	49	0	NA	NA	NA	0.7569721115537849	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021359	Chromosome_9A	684	1	21	40.64327485380117	0.7465696465696465	0.4608294930875576	21	0	0.4608294930875576	21	0	NA	NA	NA	4.259634888438134	62	0	unmethylated (<10%)	Q9ZRW8	Glutathione S-transferase U19 (AtGSTU19) (EC 2.5.1.18) (GST class-tau member 19) (Glutathione S-transferase 8)	cellular response to water deprivation [GO:0042631]; glutathione metabolic process [GO:0006749]; response to oxidative stress [GO:0006979]; toxin catabolic process [GO:0009407]	hit with GO BP
GN021360	Chromosome_9A	2516	5	68	37.83783783783784	0.7551053734966346	1.0406504065040652	68	0	0.9766684753119913	42	0	1.1363636363636365	26	0	0.8632439800090868	87	0	unmethylated (<10%)	A2RU49	Hydroxylysine kinase (5-hydroxy-L-lysine kinase) (EC 2.7.1.81) (Aminoglycoside phosphotransferase domain-containing protein 1)	L-lysine catabolic process [GO:0019477]	hit with GO BP
GN021352	Chromosome_9A	9749	4	145	33.65473381885322	0.5262334017057109	82.15268856670949	145	0.993103448275862	83.14606741573034	21	1	82.0140123392241	124	0.9919354838709677	42.74809160305343	20	0.3	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021353	Chromosome_9A	1191	1	30	41.8975650713686	0.5740312319259687	88.45500848896435	30	1	88.45500848896435	30	1	NA	NA	NA	92.51184834123222	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021354	Chromosome_9A	11295	11	148	35.298804780876495	0.42253969698348426	88.88784696174044	147	0.9251700680272109	82.83115406480955	29	0.8275862068965517	90.08422234699607	118	0.9491525423728814	58.18431911966988	39	0.6410256410256411	methylated (>=50%)	B0WGM1	Elongation factor G, mitochondrial (EF-Gmt) (Elongation factor G 1, mitochondrial) (mEF-G 1) (Elongation factor G1)	mitochondrial translational elongation [GO:0070125]	hit with GO BP
GN021351	Chromosome_9A	14560	8	158	35.3021978021978	0.35007397954564096	55.964398133072834	158	0.569620253164557	47.84	39	0.48717948717948717	57.239733768680146	119	0.5966386554621849	0.6495193556767992	59	0	methylated (>=50%)	D6C652	Transcriptional coactivator YAP1-A (Yes-associated protein 1-A) (xYAP) (Protein yorkie homolog-A) (Yes-associated protein YAP65 homolog A)	hippo signaling [GO:0035329]; positive regulation of epithelial cell proliferation [GO:0050679]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of stem cell proliferation [GO:0072091]	hit with GO BP
GN021350	Chromosome_9A	6976	3	181	38.30275229357798	0.7076593185676391	0.7814848211602043	177	0	0.3382187147688839	23	0	0.8496618692561123	154	0	0.7241813602015114	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021349	Chromosome_9A	2216	2	65	37.68050541516246	0.8289881096262532	0.5120481927710844	65	0	0.5913272010512484	37	0	0.44493882091212456	28	0	0.7850834151128557	36	0	unmethylated (<10%)	Q0V9W6	BTB/POZ domain-containing protein 6	NA	hit, no GO BP
GN021348	Chromosome_9A	1040	3	28	33.75	0.9510745313214449	1.5950920245398772	28	0	1.2987012987012987	19	0	1.9830028328611897	9	0	1.2334536702767749	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021347	Chromosome_9A	2391	5	72	38.26850690087829	0.8229220443985544	0.7887517146776406	72	0	0.9090909090909091	58	0	0.33003300330033003	14	0	0.2861230329041488	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021346	Chromosome_9A	3773	3	103	35.64802544394381	0.8918516376588088	0.41139240506329117	67	0	0.2803738317757009	32	0	0.4784688995215311	35	0	0.80393032603841	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021345	Chromosome_9A	11027	17	288	36.10229436836855	0.8026053152596242	0.820084885979426	285	0	0.43383947939262474	57	0	0.916030534351145	228	0	0.7892293407613742	38	0	unmethylated (<10%)	P11584	Integrin beta-PS (Position-specific antigen beta subunit) (Protein myospheroid) (Protein olfactory C)	actin filament organization [GO:0007015]; axon guidance [GO:0007411]; border follicle cell migration [GO:0007298]; calcium-dependent cell-cell adhesion [GO:0016339]; cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; cell-substrate adhesion [GO:0031589]; central nervous system development [GO:0007417]; central nervous system morphogenesis [GO:0021551]; determination of adult lifespan [GO:0008340]; dorsal closure [GO:0007391]; dorsal trunk growth, open tracheal system [GO:0035001]; germ-band extension [GO:0007377]; germ-line stem cell population maintenance [GO:0030718]; heart morphogenesis [GO:0003007]; hemocyte migration [GO:0035099]; heterophilic cell-cell adhesion [GO:0007157]; imaginal disc-derived male genitalia morphogenesis [GO:0048803]; imaginal disc-derived wing morphogenesis [GO:0007476]; integrin-mediated signaling pathway [GO:0007229]; larval heart development [GO:0007508]; maintenance of epithelial integrity, open tracheal system [GO:0035160]; midgut development [GO:0007494]; muscle organ development [GO:0007517]; negative regulation of cell migration [GO:0030336]; positive regulation of synapse maturation [GO:0090129]; regulation of cell shape [GO:0008360]; regulation of stress fiber assembly [GO:0051492]; salivary gland development [GO:0007431]; sarcomere organization [GO:0045214]; sensory perception of smell [GO:0007608]; somatic muscle attachment to chitin-based cuticle [GO:0160175]; substrate adhesion-dependent cell spreading [GO:0034446]; substrate-dependent cell migration, cell extension [GO:0006930]; ventral cord development [GO:0007419]	hit with GO BP
GN021344	Chromosome_9A	834	1	39	45.68345323741007	0.8973184727433238	0.7774538386783285	39	0	0.7774538386783285	39	0	NA	NA	NA	1.0078878177037687	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021343	Chromosome_9A	2166	7	57	36.472760849492154	0.8017012987012987	1.1443102352193262	57	0	0.9868421052631579	42	0	1.4734774066797642	15	0	0.7082630691399663	58	0	unmethylated (<10%)	P33527	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cellular response to amyloid-beta [GO:1904646]; cellular response to oxidative stress [GO:0034599]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; export across plasma membrane [GO:0140115]; glutathione transmembrane transport [GO:0034775]; heme catabolic process [GO:0042167]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; phospholipid translocation [GO:0045332]; positive regulation of inflammatory response [GO:0050729]; response to xenobiotic stimulus [GO:0009410]; sphingolipid biosynthetic process [GO:0030148]; sphingolipid translocation [GO:0099039]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; transport across blood-brain barrier [GO:0150104]; xenobiotic metabolic process [GO:0006805]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN021342	Chromosome_9A	7154	17	196	34.95946323734974	0.897114128397166	0.8475918884664132	196	0	0.5791505791505791	80	0	1.004772670183371	116	0	0.7858546168958742	27	0	unmethylated (<10%)	O35379	ATP-binding cassette sub-family C member 1 (EC 7.6.2.-) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter) (Multidrug resistance-associated protein 1) (EC 7.6.2.2)	amygdala development [GO:0021764]; amyloid-beta clearance [GO:0097242]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of lipid antigen via MHC class Ib [GO:0048003]; apoptotic process [GO:0006915]; astrocyte differentiation [GO:0048708]; bilirubin transport [GO:0015723]; blood vessel diameter maintenance [GO:0097746]; carboxylic acid transmembrane transport [GO:1905039]; cell chemotaxis [GO:0060326]; cell redox homeostasis [GO:0045454]; cellular response to amyloid-beta [GO:1904646]; cellular response to type II interferon [GO:0071346]; cobalamin transport [GO:0015889]; cyclic nucleotide transport [GO:0070729]; defense response to Gram-positive bacterium [GO:0050830]; DNA damage response [GO:0006974]; endothelial cell apoptotic process [GO:0072577]; endothelium development [GO:0003158]; exploration behavior [GO:0035640]; export across plasma membrane [GO:0140115]; export from cell [GO:0140352]; fibroblast apoptotic process [GO:0044346]; gene expression [GO:0010467]; glial cell differentiation [GO:0010001]; glucocorticoid metabolic process [GO:0008211]; glutathione metabolic process [GO:0006749]; glutathione transmembrane transport [GO:0034775]; glutathione transport [GO:0034635]; granuloma formation [GO:0002432]; hippocampus development [GO:0021766]; hydrogen peroxide biosynthetic process [GO:0050665]; immune response [GO:0006955]; inflammatory response [GO:0006954]; inflammatory response to antigenic stimulus [GO:0002437]; intracellular chemical homeostasis [GO:0055082]; intracellular nitrogen homeostasis [GO:0141067]; leukotriene biosynthetic process [GO:0019370]; leukotriene metabolic process [GO:0006691]; leukotriene transport [GO:0071716]; long-chain fatty acid import across plasma membrane [GO:0015911]; lymphocyte migration [GO:0072676]; macrophage activation [GO:0042116]; memory [GO:0007613]; multicellular organism growth [GO:0035264]; neural tissue regeneration [GO:0097719]; neurogenesis [GO:0022008]; NK T cell activation [GO:0051132]; phospholipid efflux [GO:0033700]; phospholipid translocation [GO:0045332]; pigment accumulation [GO:0043476]; positive regulation of cell migration [GO:0030335]; positive regulation of inflammatory response [GO:0050729]; protein localization to cell surface [GO:0034394]; reactive oxygen species biosynthetic process [GO:1903409]; regulation of catalytic activity [GO:0050790]; regulation of cellular response to drug [GO:2001038]; regulation of membrane potential [GO:0042391]; response to fluid shear stress [GO:0034405]; response to glucocorticoid [GO:0051384]; response to oxidative stress [GO:0006979]; response to toxic substance [GO:0009636]; response to type II interferon [GO:0034341]; response to xenobiotic stimulus [GO:0009410]; sphingolipid translocation [GO:0099039]; superoxide anion generation [GO:0042554]; tetrahydrobiopterin metabolic process [GO:0046146]; tissue homeostasis [GO:0001894]; transepithelial transport [GO:0070633]; transmembrane transport [GO:0055085]; vasodilation [GO:0042311]; xenobiotic detoxification by transmembrane export across the plasma membrane [GO:1990961]; xenobiotic transmembrane transport [GO:0006855]; xenobiotic transport [GO:0042908]; xenobiotic transport across blood-brain barrier [GO:1990962]	hit with GO BP
GN021341	Chromosome_9A	32898	12	594	34.78630919812755	0.6000762047854984	25.89830508474576	591	0.22673434856175972	29.221435793731043	67	0.16417910447761194	25.56388427229251	524	0.23473282442748092	0.7109004739336493	24	0	sparse (10-50%)	O43657	Tetraspanin-6 (Tspan-6) (A15 homolog) (Putative NF-kappa-B-activating protein 321) (T245 protein) (Tetraspanin TM4-D) (Transmembrane 4 superfamily member 6)	negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of cytoplasmic pattern recognition receptor signaling pathway [GO:0039532]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]	hit with GO BP
GN021340	Chromosome_9A	15683	9	248	34.76375693426003	0.5245691681159792	87.73558102093001	247	0.9595141700404858	70.53030303030303	34	0.8235294117647058	88.88271542580058	213	0.9812206572769953	1.7972681524083394	53	0	methylated (>=50%)	Q8K2K6	Arf-GAP domain and FG repeat-containing protein 1 (HIV-1 Rev-binding protein homolog) (Nucleoporin-like protein RIP)	acrosome assembly [GO:0001675]; intermediate filament organization [GO:0045109]; spermatid nucleus differentiation [GO:0007289]	hit with GO BP
GN021338	Chromosome_9A	5205	6	81	35.61959654178674	0.4933545370292358	70.56962025316456	81	0.8148148148148148	90.99526066350711	8	1	68.2311448724905	73	0.7945205479452054	18.029850746268657	50	0.24	methylated (>=50%)	Q2TBN6	PCI domain-containing protein 2 (CSN12-like protein)	negative regulation of gene expression, epigenetic [GO:0045814]; negative regulation of lymphoid progenitor cell differentiation [GO:1905457]; poly(A)+ mRNA export from nucleus [GO:0016973]; post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery [GO:0000973]; spleen development [GO:0048536]; transcription elongation by RNA polymerase II [GO:0006368]	hit with GO BP
GN021339	Chromosome_9A	27295	29	703	35.61091775050375	0.8124122741058225	2.8652204643070736	703	0	2.2532037741163218	139	0	3.011622031328954	564	0	1.190791214607039	59	0	unmethylated (<10%)	Q17LW0	Myosin-VIIa (Protein crinkled)	actin filament-based movement [GO:0030048]; antennal morphogenesis [GO:0048800]; chaeta morphogenesis [GO:0008407]; imaginal disc-derived wing hair organization [GO:0035317]; sensory perception of sound [GO:0007605]	hit with GO BP
GN021331	Chromosome_9A	249	1	5	52.208835341365464	0.2947443181818182	87.3015873015873	5	1	87.3015873015873	5	1	NA	NA	NA	78.73475609756098	40	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021332	Chromosome_9A	13822	7	155	35.11792794096368	0.3649482969613222	71.14394013023617	155	0.832258064516129	67.66109785202865	15	0.7333333333333333	71.45275632208232	140	0.8428571428571429	45.26823387582881	38	0.5	methylated (>=50%)	B5X8M4	Lys-63-specific deubiquitinase BRCC36 (EC 3.4.19.-) (BRCA1-A complex subunit BRCC36) (BRCA1/BRCA2-containing complex subunit 3) (BRCA1/BRCA2-containing complex subunit 36) (BRISC complex subunit BRCC36)	DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; mitotic G2 DNA damage checkpoint signaling [GO:0007095]; positive regulation of DNA repair [GO:0045739]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; protein K63-linked deubiquitination [GO:0070536]; response to ionizing radiation [GO:0010212]	hit with GO BP
GN021333	Chromosome_9A	11307	4	249	36.207658972318036	0.673963719407101	0.6394316163410302	244	0	0.6046863189720333	34	0	0.6430363864491845	210	0	1.1534025374855825	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021334	Chromosome_9A	7031	7	123	34.46166974825771	0.5892798737510017	81.7762399077278	110	0.8363636363636363	84.8906560636183	7	0.8571428571428571	81.53272190268926	103	0.8349514563106796	0.5957836846929423	50	0	methylated (>=50%)	Q8K194	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein (U4/U6.U5 snRNP 27 kDa protein) (U4/U6.U5-27K) (U4/U6.U5 tri-snRNP-associated protein 3)	RNA splicing [GO:0008380]	hit with GO BP
GN021335	Chromosome_9A	30632	6	141	43.075868372943326	0.10112483772799384	86.98575949367088	84	0.9642857142857143	95.55698647778493	26	1	83.1858407079646	58	0.9482758620689655	71.91650853889944	18	1	methylated (>=50%)	H3BCW1	ADP-ribosylhydrolase ARH3 (ADP-ribose glycohydrolase ARH3) (LchARH3) (ADP-ribosylhydrolase 3) (O-acetyl-ADP-ribose deacetylase ARH3) (EC 3.5.1.-) (Poly(ADP-ribose) glycohydrolase ARH3) (EC 3.2.1.143) ([Protein ADP-ribosylarginine] hydrolase-like protein 2) ([Protein ADP-ribosylserine] hydrolase) (EC 3.2.2.-)	negative regulation of necroptotic process [GO:0060546]; peptidyl-serine ADP-deribosylation [GO:0140290]	hit with GO BP
GN021336	Chromosome_9A	21136	16	328	34.694360333081	0.5166978953785978	80.26006501625406	321	0.9127725856697819	84.4988864142539	36	0.9722222222222222	79.72394366197183	285	0.9052631578947369	0.881445570736007	49	0	methylated (>=50%)	Q1JQD6	TATA box-binding protein-associated factor RNA polymerase I subunit B (RNA polymerase I-specific TBP-associated factor 63 kDa) (TAFI63) (TATA box-binding protein-associated factor 1B) (TBP-associated factor 1B) (Transcription initiation factor SL1/TIF-IB subunit B)	nucleolar large rRNA transcription by RNA polymerase I [GO:0042790]; RNA polymerase I preinitiation complex assembly [GO:0001188]	hit with GO BP
GN021337	Chromosome_9A	27742	17	360	34.59375675870521	0.4360397569872709	89.60423948584959	359	0.9805013927576601	92.60719566288812	36	1	89.35633493368053	323	0.978328173374613	21.229757085020243	61	0.19672131147540983	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021330	Chromosome_9A	2807	4	68	34.66334164588529	0.8096474261087923	0.5136523384698567	67	0	0.8695652173913043	26	0	0.35307963907414674	41	0	8.950169327527819	36	0.08333333333333333	unmethylated (<10%)	Q9TUP7	Orexin receptor type 2 (Ox-2-R) (Ox2-R) (Ox2R) (Hypocretin receptor type 2)	cellular response to hormone stimulus [GO:0032870]; circadian sleep/wake cycle process [GO:0022410]; feeding behavior [GO:0007631]; glucose homeostasis [GO:0042593]; locomotion [GO:0040011]; neuropeptide signaling pathway [GO:0007218]; regulation of circadian sleep/wake cycle, wakefulness [GO:0010840]; regulation of cytosolic calcium ion concentration [GO:0051480]	hit with GO BP
GN021329	Chromosome_9A	7876	5	99	33.43067546978161	0.45187874235880743	66.74955595026643	98	0.8163265306122449	63.58653093187157	48	0.75	69.37581274382315	50	0.88	0.6123016977456165	72	0	methylated (>=50%)	Q8N9V6	Ankyrin repeat domain-containing protein 53	mitotic metaphase chromosome alignment [GO:0007080]; positive regulation of microtubule polymerization [GO:0031116]; regulation of mitotic cytokinesis [GO:1902412]; regulation of mitotic spindle organization [GO:0060236]	hit with GO BP
GN021328	Chromosome_9A	302	2	3	43.04635761589404	0.2146410803127221	0	3	0	0	3	0	NA	NA	NA	0.19083969465648856	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021327	Chromosome_9A	246	1	14	45.9349593495935	1.1102514506769825	1.4492753623188406	5	0	1.4492753623188406	5	0	NA	NA	NA	2.3849372384937237	50	0	unmethylated (<10%)	Q04861	Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]	canonical NF-kappaB signal transduction [GO:0007249]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN021326	Chromosome_9A	41471	6	734	34.079236092691275	0.6095937011797271	54.186493173913796	731	0.6224350205198358	70.80900750625521	20	0.85	53.834328727426936	711	0.6160337552742616	60.01899335232669	12	0.6666666666666666	methylated (>=50%)	Q9GUM7	Putative complexin-1	modulation of chemical synaptic transmission [GO:0050804]; regulation of synaptic vesicle fusion to presynaptic active zone membrane [GO:0031630]; synaptic vesicle exocytosis [GO:0016079]	hit with GO BP
GN021325	Chromosome_9A	342	1	3	41.812865497076025	0.20930232558139536	49.46236559139785	3	0.6666666666666666	49.46236559139785	3	0.6666666666666666	NA	NA	NA	49.85110184633711	69	0.5362318840579711	NA	NA	NA	NA	no Swiss-Prot hit
GN021324	Chromosome_9A	4020	4	112	39.82587064676617	0.7069308236535436	0.5852417302798982	111	0	0.5524861878453039	56	0	0.6132075471698113	55	0	0.7031642390758412	58	0	unmethylated (<10%)	P10632	Cytochrome P450 2C8 (EC 1.14.14.1) (CYPIIC8) (Cytochrome P450 IIC2) (Cytochrome P450 MP-12) (Cytochrome P450 MP-20) (Cytochrome P450 form 1) (S-mephenytoin 4-hydroxylase)	epoxygenase P450 pathway [GO:0019373]; estrogen metabolic process [GO:0008210]; icosanoid biosynthetic process [GO:0046456]; lipid hydroxylation [GO:0002933]; long-chain fatty acid biosynthetic process [GO:0042759]; omega-hydroxylase P450 pathway [GO:0097267]; oxidative demethylation [GO:0070989]; retinoic acid metabolic process [GO:0042573]; retinol metabolic process [GO:0042572]; steroid metabolic process [GO:0008202]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021323	Chromosome_9A	4840	8	133	34.896694214876035	0.9033043888255864	1.0208193418401612	133	0	1.1892626571525655	51	0	0.9107063527321191	82	0	0.5885815185403178	60	0	unmethylated (<10%)	O55071	Cytochrome P450 2B19 (EC 1.14.14.1) (CYPIIB19)	epoxygenase P450 pathway [GO:0019373]; ketone metabolic process [GO:0042180]; steroid metabolic process [GO:0008202]; xenobiotic catabolic process [GO:0042178]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021322	Chromosome_9A	5266	8	130	34.84618306114698	0.8140129418283603	1.1227050587769118	130	0	1.256544502617801	54	0	1.041223969400765	76	0	0.43535045711798	40	0	unmethylated (<10%)	Q64583	Cytochrome P450 2B15 (EC 1.14.14.1) (CYPIIB15)	epoxygenase P450 pathway [GO:0019373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021321	Chromosome_9A	10812	7	332	35.44210136884943	0.9791138183972532	2.0319488817891376	316	0	0.6691449814126395	42	0	2.1600838867528838	274	0	0.43509789702683105	32	0	unmethylated (<10%)	Q64583	Cytochrome P450 2B15 (EC 1.14.14.1) (CYPIIB15)	epoxygenase P450 pathway [GO:0019373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021320	Chromosome_9A	14947	8	354	35.55228473941259	0.7495111964796798	0.7479693800035061	354	0	0.6524102935846321	65	0	0.7663369095722447	289	0	0.741106719367589	40	0	unmethylated (<10%)	P00178	Cytochrome P450 2B4 (EC 1.14.14.1) (CYPIIB4) (Cytochrome P450 isozyme 2) (Cytochrome P450 LM2) (Cytochrome P450 type B0) (Cytochrome P450 type B1)	epoxygenase P450 pathway [GO:0019373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021319	Chromosome_9A	15849	8	338	35.51012682188151	0.6765287074623402	0.7644662686234027	338	0	0.6701414743112435	62	0	0.781096160157532	276	0	0.3389830508474576	40	0	unmethylated (<10%)	P00178	Cytochrome P450 2B4 (EC 1.14.14.1) (CYPIIB4) (Cytochrome P450 isozyme 2) (Cytochrome P450 LM2) (Cytochrome P450 type B0) (Cytochrome P450 type B1)	epoxygenase P450 pathway [GO:0019373]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN021318	Chromosome_9A	375	1	7	44.8	0.3860294117647059	0.5050505050505051	7	0	0.5050505050505051	7	0	NA	NA	NA	0.550314465408805	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021317	Chromosome_9A	399	1	25	50.87719298245614	0.9701419957206769	0.9803921568627451	25	0	0.9803921568627451	25	0	NA	NA	NA	0.477516912057302	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021316	Chromosome_9A	17879	6	450	36.46177079254992	0.7573980350230047	0.9591584158415841	449	0	0.6169377453729669	93	0	1.0231923601637107	356	0	0.35423308537017356	47	0	unmethylated (<10%)	Q8N0W4	Neuroligin-4, X-linked (Neuroligin X) (HNLX)	adult behavior [GO:0030534]; brainstem development [GO:0003360]; cell-cell junction organization [GO:0045216]; cerebellum development [GO:0021549]; learning [GO:0007612]; modulation of chemical synaptic transmission [GO:0050804]; negative regulation of excitatory postsynaptic potential [GO:0090394]; neuron cell-cell adhesion [GO:0007158]; neuron differentiation [GO:0030182]; organ growth [GO:0035265]; presynapse assembly [GO:0099054]; presynaptic membrane assembly [GO:0097105]; regulation of synapse assembly [GO:0051963]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; synapse organization [GO:0050808]; vocalization behavior [GO:0071625]	hit with GO BP
GN021315	Chromosome_9A	82090	6	2249	35.62918747715921	0.8633747516598906	0.6238367362208775	2138	0	0.835820895522388	89	0	0.616979984358254	2049	0	0.8566275924256087	58	0	unmethylated (<10%)	Q69ZK9	Neuroligin-2	gephyrin clustering involved in postsynaptic density assembly [GO:0097116]; inhibitory synapse assembly [GO:1904862]; insulin metabolic process [GO:1901142]; jump response [GO:0007630]; locomotory exploration behavior [GO:0035641]; modulation of chemical synaptic transmission [GO:0050804]; neuromuscular process controlling balance [GO:0050885]; neuron cell-cell adhesion [GO:0007158]; neurotransmitter-gated ion channel clustering [GO:0072578]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of dendritic spine development [GO:0060999]; positive regulation of excitatory postsynaptic potential [GO:2000463]; positive regulation of inhibitory postsynaptic potential [GO:0097151]; positive regulation of insulin secretion [GO:0032024]; positive regulation of protein localization to synapse [GO:1902474]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission, GABAergic [GO:0032230]; positive regulation of synaptic transmission, glutamatergic [GO:0051968]; positive regulation of synaptic vesicle clustering [GO:2000809]; positive regulation of t-SNARE clustering [GO:1904034]; postsynaptic density protein 95 clustering [GO:0097119]; postsynaptic membrane assembly [GO:0097104]; postsynaptic specialization assembly [GO:0098698]; presynapse assembly [GO:0099054]; presynaptic membrane assembly [GO:0097105]; protein localization to cell surface [GO:0034394]; protein localization to synapse [GO:0035418]; regulation of presynapse assembly [GO:1905606]; regulation of respiratory gaseous exchange by nervous system process [GO:0002087]; sensory perception of pain [GO:0019233]; social behavior [GO:0035176]; synapse assembly [GO:0007416]; synapse organization [GO:0050808]; synaptic transmission, GABAergic [GO:0051932]; terminal button organization [GO:0072553]; thigmotaxis [GO:0001966]	hit with GO BP
GN012549	Chromosome_9A	1328	2	39	44.05120481927711	0.6055702359516404	1.1363636363636365	7	0	1.1363636363636365	7	0	NA	NA	NA	0.30959752321981426	15	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021314	Chromosome_9A	57894	21	974	36.56855632708053	0.5034522012078299	83.81951250026064	881	0.9500567536889898	89.23138510808647	65	0.9846153846153847	83.52213985614043	816	0.9473039215686274	88.14363143631437	17	1	methylated (>=50%)	Q5R9R1	Erythroid differentiation-related factor 1	positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN021313	Chromosome_9A	10569	12	93	35.29189138045226	0.28322212396494895	73.07491743438206	88	0.8636363636363636	74.6606334841629	17	0.9411764705882353	72.78701992195522	71	0.8450704225352113	50.261780104712045	40	0.425	methylated (>=50%)	Q3V096	Ankyrin repeat domain-containing protein 42	positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of cytokine production involved in inflammatory response [GO:1900017]	hit with GO BP
GN002695	Chromosome_9A	1241	1	42	38.6784850926672	0.9075586355800874	0.429000429000429	42	0	0.429000429000429	42	0	NA	NA	NA	0.6025466120964075	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021308	Chromosome_9A	13905	7	229	36.116504854368934	0.5055005467367878	83.85302108940354	227	0.920704845814978	94.6969696969697	46	0.9782608695652174	82.38060249816311	181	0.9060773480662984	0.6169212690951822	51	0	methylated (>=50%)	Q9P0J7	E3 ubiquitin-protein ligase KCMF1 (EC 2.3.2.27) (FGF-induced in gastric cancer) (Potassium channel modulatory factor) (PCMF) (ZZ-type zinc finger-containing protein 1)	HRI-mediated signaling [GO:0140468]; negative regulation of HRI-mediated signaling [GO:0141191]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; response to oxidative stress [GO:0006979]; synaptic signaling [GO:0099536]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN021307	Chromosome_9A	14620	6	204	34.555403556771545	0.467489767665824	76.85425906101851	199	0.8894472361809045	80.26490066225166	16	0.9375	76.64529741134464	183	0.8852459016393442	0.4782400765184122	36	0	methylated (>=50%)	Q9BSG0	Protease-associated domain-containing protein 1 (Protease-associated domain-containing protein of 21 kDa) (hPAP21)	NA	hit, no GO BP
GN021306	Chromosome_9A	36887	18	903	34.1095779000732	0.8416311760625047	1.4285714285714286	901	0	0.5252525252525253	115	0	1.516522423288749	786	0	0.5387484459179445	46	0	unmethylated (<10%)	P51841	Retinal guanylyl cyclase 2 (RETGC-2) (EC 4.6.1.2) (Guanylate cyclase 2F, retinal) (Guanylate cyclase F) (GC-F) (Rod outer segment membrane guanylate cyclase 2) (ROS-GC2)	cGMP biosynthetic process [GO:0006182]; detection of light stimulus involved in visual perception [GO:0050908]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of opsin-mediated signaling pathway [GO:0022400]; visual perception [GO:0007601]	hit with GO BP
GN021305	Chromosome_9A	1128	1	38	43.351063829787236	0.755978835978836	0.27416038382453733	38	0	0.27416038382453733	38	0	NA	NA	NA	0.4921259842519685	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021304	Chromosome_9A	1335	3	40	38.57677902621723	0.8055027604308083	0.8542141230068337	40	0	0.728744939271255	34	0	1.1516314779270633	6	0	0.6929248723559446	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021303	Chromosome_9A	3364	3	71	38.64447086801427	0.5835782786634903	92.69018274543136	71	0.9859154929577465	90.10880316518299	21	1	93.39648173207037	50	0.98	53.125	31	0.5806451612903226	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021302	Chromosome_9A	20254	20	287	35.59296929001679	0.44850676953878066	80.99056870164341	286	0.8356643356643356	91.30434782608695	20	1	80.3653788559449	266	0.8233082706766918	90.05847953216374	13	1	methylated (>=50%)	P48818	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (VLCAD) (EC 1.3.8.9) (Long-chain specific acyl-CoA dehydrogenase, mitochondrial) (EC 1.3.8.8)	fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	hit with GO BP
GN021301	Chromosome_9A	474	2	19	52.10970464135021	0.6436535162950258	0.44543429844098	19	0	0.44543429844098	19	0	NA	NA	NA	0.6187529747739172	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021300	Chromosome_9A	15875	12	423	36.585826771653544	0.7966824695154505	3.123486682808717	281	0.0035587188612099642	4.3057050592034445	93	0	2.6170163707632	188	0.005319148936170213	0.5123825789923142	51	0	unmethylated (<10%)	Q8BXH3	Guanylate cyclase soluble subunit beta-2 (GCS-beta-2) (EC 4.6.1.2) (guanylate cyclase) (EC 4.6.1.2)	intracellular signal transduction [GO:0035556]; response to oxygen levels [GO:0070482]	hit with GO BP
GN021299	Chromosome_9A	16387	11	256	34.67992921218039	0.5220666765395102	76.39311043566363	252	0.8849206349206349	68.62606232294617	28	0.6428571428571429	76.9914884329987	224	0.9151785714285714	37.33733733733734	52	0.36538461538461536	methylated (>=50%)	A2TIL1	Glutathione reductase, mitochondrial (GR) (GRase) (EC 1.8.1.7)	cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; glutathione metabolic process [GO:0006749]	hit with GO BP
GN021298	Chromosome_9A	777	3	8	35.52123552123552	0.32702020202020204	87.5945537065053	8	1	87.5945537065053	8	1	NA	NA	NA	40.262172284644194	20	0.45	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021273	Chromosome_9A	67577	22	759	34.28533376740607	0.38239682129633046	59.53743989008473	749	0.6328437917222964	78.5239852398524	89	0.8876404494382022	57.588688296932204	660	0.5984848484848485	90.51505769772024	43	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021274	Chromosome_9A	14180	17	212	35.69111424541608	0.4705278365167141	80.78757984959974	206	0.8737864077669902	80.05813953488372	66	0.8333333333333334	81.06866808558306	140	0.8928571428571429	11.594202898550725	34	0	methylated (>=50%)	Q9Z1Z1	Eukaryotic translation initiation factor 2-alpha kinase 3 (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (Pancreatic eIF2-alpha kinase) (Protein tyrosine kinase EIF2AK3) (EC 2.7.10.2)	angiogenesis [GO:0001525]; bone mineralization [GO:0030282]; calcium-mediated signaling [GO:0019722]; cellular response to amino acid starvation [GO:0034198]; cellular response to cold [GO:0070417]; cellular response to glucose starvation [GO:0042149]; chondrocyte development [GO:0002063]; eiF2alpha phosphorylation in response to endoplasmic reticulum stress [GO:0036492]; endocrine pancreas development [GO:0031018]; endoplasmic reticulum organization [GO:0007029]; endoplasmic reticulum unfolded protein response [GO:0030968]; ER overload response [GO:0006983]; ERAD pathway [GO:0036503]; fat cell differentiation [GO:0045444]; insulin-like growth factor receptor signaling pathway [GO:0048009]; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress [GO:0070059]; lactation [GO:0007595]; negative regulation of apoptotic process [GO:0043066]; negative regulation of gene expression [GO:0010629]; negative regulation of myelination [GO:0031642]; negative regulation of translation [GO:0017148]; negative regulation of translation in response to endoplasmic reticulum stress [GO:1902010]; negative regulation of translation in response to stress [GO:0032055]; ossification [GO:0001503]; pancreas development [GO:0031016]; PERK-mediated unfolded protein response [GO:0036499]; positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902237]; positive regulation of gene expression [GO:0010628]; positive regulation of glutathione biosynthetic process [GO:1903788]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of signal transduction [GO:0009967]; positive regulation of transcription by RNA polymerase I [GO:0045943]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of vascular endothelial growth factor production [GO:0010575]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation [GO:0060734]; regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway [GO:1902235]; regulation of fatty acid metabolic process [GO:0019217]; regulation of translation initiation in response to endoplasmic reticulum stress [GO:0036491]; regulation of translational initiation [GO:0006446]; regulation of translational initiation by eIF2 alpha phosphorylation [GO:0010998]; regulation of translational initiation in response to stress [GO:0043558]; response to endoplasmic reticulum stress [GO:0034976]; response to manganese-induced endoplasmic reticulum stress [GO:1990737]; skeletal system development [GO:0001501]; SREBP signaling pathway [GO:0032933]; translation [GO:0006412]	hit with GO BP
GN004495	Chromosome_9A	1600	2	41	54	0.3518784731907224	0.9216589861751152	24	0	0.9216589861751152	24	0	NA	NA	NA	1.422963689892051	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021280	Chromosome_9A	12405	8	301	34.324869004433694	0.8250352648576413	0.5411314566821536	301	0	0.623229461756374	66	0	0.5215035557060617	235	0	0.5527043031977892	45	0	unmethylated (<10%)	P31320	cAMP-dependent protein kinase regulatory subunit (PKA regulatory subunit)	cellular response to stress [GO:0033554]	hit with GO BP
GN001173	Chromosome_9A	298	1	10	47.986577181208055	0.6079151366789066	1.3824884792626728	10	0	1.3824884792626728	10	0	NA	NA	NA	0.6020278833967047	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021282	Chromosome_9A	3287	3	49	35.99026467903864	0.46165730337078653	87.0614740907628	49	0.9795918367346939	88.38383838383838	13	1	86.74890569040987	36	0.9722222222222222	90.2265659706797	29	1	methylated (>=50%)	P35270	Sepiapterin reductase (SPR) (EC 1.1.1.153)	nitric oxide biosynthetic process [GO:0006809]; tetrahydrobiopterin biosynthetic process [GO:0006729]	hit with GO BP
GN021283	Chromosome_9A	29116	24	464	35.17653523835692	0.5161015071429991	87.24636710640863	461	0.9544468546637744	77.96812749003983	48	0.8541666666666666	88.09767509869864	413	0.9661016949152542	52.770914225202965	45	0.7777777777777778	methylated (>=50%)	Q9Y2D4	Exocyst complex component 6B (Exocyst complex component Sec15B) (SEC15-like protein 2)	exocytosis [GO:0006887]; Golgi to plasma membrane transport [GO:0006893]; intracellular protein transport [GO:0006886]; membrane fission [GO:0090148]; mitotic cytokinesis [GO:0000281]; vesicle docking involved in exocytosis [GO:0006904]; vesicle tethering involved in exocytosis [GO:0090522]	hit with GO BP
GN021284	Chromosome_9A	948	1	57	46.94092827004219	1.0915040601139256	0.3908431044109436	57	0	0.3908431044109436	57	0	NA	NA	NA	0.8449669360764144	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021285	Chromosome_9A	8999	7	152	37.38193132570286	0.4845843943651593	91.22760800842993	151	0.9933774834437086	93.77386196769457	82	1	89.15691425841892	69	0.9855072463768116	93.26923076923077	41	1	methylated (>=50%)	Q8Y3S3	Macro domain-containing protein lmo2759	NA	hit, no GO BP
GN021286	Chromosome_9A	2461	2	25	34.05119869971556	0.35305425644851235	80.5934242181235	23	1	NA	NA	NA	80.5934242181235	23	1	84.84848484848484	1	1	methylated (>=50%)	Q6NS46	Protein RRP5 homolog (Apoptosis-linked gene 4 protein) (Programmed cell death protein 11)	rRNA processing [GO:0006364]	hit with GO BP
GN021287	Chromosome_9A	189	1	12	53.96825396825397	0.875	5.513784461152882	12	0	5.513784461152882	12	0	NA	NA	NA	0.7900101936799184	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001475	Chromosome_9A	706	3	7	33.286118980169974	0.36515442589035024	70.11764705882354	7	0.8571428571428571	61.43790849673203	5	0.8	92.43697478991596	2	1	72.56402708272005	50	0.92	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011193	Chromosome_9A	697	1	7	37.87661406025825	0.2805958132045089	56.011730205278596	7	0.5714285714285714	56.011730205278596	7	0.5714285714285714	NA	NA	NA	48.53448275862069	16	0.4375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN011192	Chromosome_9A	8942	9	100	34.83560724670096	0.36865166334377203	62.38787503866378	65	0.8	73.93715341959334	46	0.9347826086956522	50.745341614906835	19	0.47368421052631576	68.39729119638827	12	0.6666666666666666	methylated (>=50%)	Q2YDJ8	N-lysine methyltransferase KMT5A (EC 2.1.1.-) (H4-K20-HMTase KMT5A) (Histone-lysine N-methyltransferase KMT5A) (EC 2.1.1.361) (Lysine-specific methylase 5A) (PR/SET domain-containing protein 07) (PR-Set7) (PR/SET07) (SET domain-containing protein 8)	negative regulation of transcription by RNA polymerase II [GO:0000122]; peptidyl-lysine monomethylation [GO:0018026]; regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043516]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN021288	Chromosome_9A	3074	3	102	38.48405985686402	0.8990623655913978	0.48672566371681414	102	0	0.39603960396039606	53	0	0.5324459234608985	49	0	0.4132231404958678	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021289	Chromosome_9A	10129	10	323	37.51604304472307	0.9063093250493992	0.5284876565554188	323	0	0.368474923234391	129	0	0.6160394265232975	194	0	0.5698005698005698	49	0	unmethylated (<10%)	F1RD85	Lysyl oxidase homolog 3A (EC 1.4.3.-) (EC 1.4.3.13) (Lysyl oxidase-like protein 3A)	collagen fibril organization [GO:0030199]; fibronectin fibril organization [GO:1905590]; inflammatory response [GO:0006954]; lung development [GO:0030324]; negative regulation of T-helper 17 cell lineage commitment [GO:2000329]; peptidyl-lysine oxidation [GO:0018057]; positive regulation of integrin-mediated signaling pathway [GO:2001046]; roof of mouth development [GO:0060021]; somite development [GO:0061053]; spinal cord development [GO:0021510]	hit with GO BP
GN021290	Chromosome_9A	1402	7	3	26.319543509272467	0.12542494185006262	60.714285714285715	2	1	60.714285714285715	2	1	NA	NA	NA	63.29365079365079	10	0.8	NA	NA	NA	NA	no Swiss-Prot hit
GN021291	Chromosome_9A	548	2	17	41.24087591240876	0.7300940438871474	0.7741935483870968	17	0	0.5565862708719852	11	0	1.271186440677966	6	0	0.3589375448671931	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021292	Chromosome_9A	2685	4	91	40.78212290502793	0.8151129585396122	0.9746012994683992	91	0	1.0345942450695118	85	0	0.3412969283276451	6	0	0.4600585529067336	34	0	unmethylated (<10%)	Q5BIM1	E3 ubiquitin-protein ligase TRIM45 (EC 2.3.2.27) (RING finger protein 99) (Tripartite motif-containing protein 45)	NA	hit, no GO BP
GN021293	Chromosome_9A	16453	5	270	36.27909803683219	0.49929640311380963	84.49277597819939	269	0.966542750929368	88.02271553949406	35	1	84.10232983097305	234	0.9615384615384616	93.52465047829286	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021294	Chromosome_9A	267	1	3	49.06367041198502	0.19071428571428573	NA	0	NA	NA	NA	NA	NA	NA	NA	0.2553191489361702	44	0	NA	NA	NA	NA	no Swiss-Prot hit
GN011769	Chromosome_9A	908	2	7	35.5726872246696	0.24387997851277723	13.793103448275861	3	0	25	1	0	12	2	0	5.972222222222222	13	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021295	Chromosome_9A	22933	9	627	36.62843936685126	0.8151362835703252	0.8706094265986191	621	0	0.27643400138217	33	0	0.9047260029363914	588	0	0.2922908293752284	51	0	unmethylated (<10%)	Q6INN8	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (dNTPase) (EC 3.1.5.-)	dATP catabolic process [GO:0046061]; defense response to virus [GO:0051607]; deoxyribonucleotide catabolic process [GO:0009264]; dGTP catabolic process [GO:0006203]; DNA damage response [GO:0006974]; DNA strand resection involved in replication fork processing [GO:0110025]; double-strand break repair via homologous recombination [GO:0000724]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; protein homotetramerization [GO:0051289]; regulation of innate immune response [GO:0045088]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN021296	Chromosome_9A	519	2	12	35.067437379576106	0.7565597667638484	0.4028197381671702	12	0	0.4424778761061947	11	0	0	1	0	1.3722126929674099	40	0	unmethylated (<10%)	O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Focus-forming activity 1) (FFA-1) (Werner syndrome protein homolog) [Includes: 3'-5' exonuclease (EC 3.1.-.-); ATP-dependent helicase (EC 5.6.2.4) (DNA 3'-5' helicase WRN)]	DNA geometric change [GO:0032392]; DNA metabolic process [GO:0006259]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; telomere maintenance [GO:0000723]	hit with GO BP
GN021297	Chromosome_9A	1269	1	44	39.00709219858156	0.9172087522176227	0.6640106241699867	44	0	0.6640106241699867	44	0	NA	NA	NA	0.641319285387082	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021271	Chromosome_9A	10438	15	279	35.71565433991186	0.8386760665595355	0.9266148123097734	278	0	0.8185538881309686	38	0	0.9454949944382648	240	0	1.4837712519319939	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021270	Chromosome_9A	44324	26	709	36.17227687031856	0.48959001879172714	88.08842542548908	653	0.9663093415007658	89.25619834710744	64	0.9375	87.9945960798681	589	0.969439728353141	0.6139677666922486	66	0	methylated (>=50%)	Q8BKC5	Importin-5 (Imp5) (Importin subunit beta-3) (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5)	cellular response to amino acid stimulus [GO:0071230]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; NLS-bearing protein import into nucleus [GO:0006607]; positive regulation of protein import into nucleus [GO:0042307]; protein import into nucleus [GO:0006606]; ribosomal protein import into nucleus [GO:0006610]	hit with GO BP
GN021269	Chromosome_9A	32118	7	440	35.512796562675135	0.43457011955573843	72.77312672247933	380	0.8421052631578947	68.2258064516129	30	0.9	73.08654327163582	350	0.8371428571428572	8.536585365853659	37	0.05405405405405406	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021268	Chromosome_9A	27690	9	288	32.816901408450704	0.3867385952967056	68.62847041696995	285	0.7192982456140351	51.31004366812227	28	0.4642857142857143	69.96080627099664	257	0.7470817120622568	12.013201320132014	25	0.08	methylated (>=50%)	Q8AW42	Zinc transporter ZIP13 (Solute carrier family 39 member 13) (Zrt- and Irt-like protein 13) (ZIP-13)	intracellular zinc ion homeostasis [GO:0006882]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN021267	Chromosome_9A	9558	10	98	36.90102531910441	0.30265150119905937	92.53208868144691	98	1	94.99105545617174	39	1	91.34199134199135	59	1	83.43558282208589	8	0.75	methylated (>=50%)	Q0P4S0	Lateral signaling target protein 2 homolog (Zinc finger FYVE domain-containing protein 28)	negative regulation of epidermal growth factor receptor signaling pathway [GO:0042059]; negative regulation of epidermal growth factor-activated receptor activity [GO:0007175]	hit with GO BP
GN021266	Chromosome_9A	9050	9	65	32.32044198895028	0.2768105030351513	87.15389568576948	46	0.9782608695652174	83.71428571428571	6	1	87.59071117561683	40	0.975	91.44792548687553	36	1	methylated (>=50%)	Q7T0X5	Charged multivesicular body protein 7 (Chromatin-modifying protein 7)	exit from mitosis [GO:0010458]; late endosome to vacuole transport [GO:0045324]; late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; nuclear membrane reassembly [GO:0031468]; vesicle budding from membrane [GO:0006900]	hit with GO BP
GN021265	Chromosome_9A	1905	1	59	39.89501312335958	0.7846401943536903	3.505392912172573	59	0	3.505392912172573	59	0	NA	NA	NA	0.576662143826323	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021264	Chromosome_9A	1265	2	40	35.17786561264822	1.024830882650788	0.635593220338983	40	0	0.9596928982725528	19	0	0.5437737901033171	21	0	0.91683038637852	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021263	Chromosome_9A	1414	4	50	41.51343705799151	0.820852200162545	0.4918032786885246	50	0	0.5565862708719852	32	0	0.39893617021276595	18	0	5.65597667638484	68	0	unmethylated (<10%)	P29183	Pancreatic triacylglycerol lipase (PL) (PTL) (Pancreatic lipase) (EC 3.1.1.3)	cholesterol homeostasis [GO:0042632]; fatty acid biosynthetic process [GO:0006633]; high-density lipoprotein particle remodeling [GO:0034375]; triglyceride catabolic process [GO:0019433]	hit with GO BP
GN021262	Chromosome_9A	5724	7	60	33.735150244584204	0.36844488024254024	83.0106353967821	60	0.9666666666666667	86.3157894736842	9	1	82.4023248304811	51	0.9607843137254902	71.96485623003196	19	0.8421052631578947	methylated (>=50%)	Q9NQY0	Bridging integrator 3	actin cortical patch localization [GO:0051666]; actin filament organization [GO:0007015]; cytoskeleton-dependent cytokinesis [GO:0061640]; endocytosis [GO:0006897]; intracellular protein localization [GO:0008104]; plasma membrane tubulation [GO:0097320]; unidimensional cell growth [GO:0009826]	hit with GO BP
GN021261	Chromosome_9A	2221	4	54	37.14542998649257	0.705394532536583	0.6676204101096805	54	0	0.7774538386783285	30	0	0.5617977528089888	24	0	0.45706823375775385	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021259	Chromosome_9A	10482	3	286	38.65674489601221	0.7303648715646732	8.554721339878718	286	0.024475524475524476	8.78533798323069	280	0.025	0.26666666666666666	6	0	0.6289308176100629	51	0	unmethylated (<10%)	Q5DU57	Spermatogenesis-associated protein 13 (APC-stimulated guanine nucleotide exchange factor 2) (Asef2)	cell migration [GO:0016477]; filopodium assembly [GO:0046847]; intracellular signal transduction [GO:0035556]; lamellipodium assembly [GO:0030032]; regulation of cell migration [GO:0030334]	hit with GO BP
GN021258	Chromosome_9A	3112	6	22	31.812339331619537	0.2794722748350859	85.27459263729632	22	0.9545454545454546	87.46518105849582	12	0.9166666666666666	83.59957401490948	10	1	10.494203782794386	29	0.13793103448275862	methylated (>=50%)	Q8VEL0	Motile sperm domain-containing protein 1	negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN021257	Chromosome_9A	7888	4	133	31.985294117647058	0.6614253848685413	88.05983847283407	129	0.8604651162790697	43.293347873500544	18	0.4444444444444444	92.17356448541938	111	0.9279279279279279	52.65006385696041	54	0.5185185185185185	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021256	Chromosome_9A	21057	10	316	34.39711259913568	0.5118737731090899	0.747737111373475	311	0	1.2861736334405145	42	0	0.672645739910314	269	0	0.6284038542103059	44	0	unmethylated (<10%)	P11438	Lysosome-associated membrane glycoprotein 1 (LAMP-1) (Lysosome-associated membrane protein 1) (120 kDa lysosomal membrane glycoprotein) (CD107 antigen-like family member A) (LGP-120) (Lysosomal membrane glycoprotein A) (LGP-A) (P2B) (CD antigen CD107a)	autophagic cell death [GO:0048102]; establishment of protein localization to organelle [GO:0072594]; Golgi to lysosome transport [GO:0090160]; granzyme-mediated programmed cell death signaling pathway [GO:0140507]; lysosomal lumen acidification [GO:0007042]; lysosomal lumen pH elevation [GO:0035752]; positive regulation of natural killer cell degranulation [GO:0043323]; positive regulation of natural killer cell mediated cytotoxicity [GO:0045954]; protein stabilization [GO:0050821]; proton transmembrane transport [GO:1902600]; regulation of organelle transport along microtubule [GO:1902513]; spermatogenesis [GO:0007283]	hit with GO BP
GN021255	Chromosome_9A	1969	5	58	36.56678517013712	0.8817393587041283	0.8208955223880597	58	0	1.1933174224343674	23	0	0.6514657980456026	35	0	1.6079158936301794	51	0	unmethylated (<10%)	Q7PCJ9	Thialysine N-epsilon-acetyltransferase (EC 2.3.1.-) (Diamine acetyltransferase 2) (EC 2.3.1.57) (Spermidine/spermine N(1)-acetyltransferase 2) (SSAT-2)	polyamine metabolic process [GO:0006595]	hit with GO BP
GN021253	Chromosome_9A	795	2	21	32.83018867924528	0.9820588235294118	0.7821229050279329	20	0	0.8888888888888888	13	0	0.6741573033707865	7	0	1.6593774118857731	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021254	Chromosome_9A	876	3	16	34.47488584474886	0.6245989304812835	1.2162162162162162	16	0	1.2403100775193798	14	0	1.0526315789473684	2	0	26.70753064798599	50	0.08	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021250	Chromosome_9A	24236	11	320	36.165208780326786	0.40380348527509957	78.27961512172038	286	0.8496503496503497	94.5705824284304	18	1	77.36310118849272	268	0.8395522388059702	13.282001924927815	22	0.13636363636363635	methylated (>=50%)	Q5XI70	Polycomb group RING finger protein 6 (RING finger protein 134)	chromatin remodeling [GO:0006338]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN021249	Chromosome_9A	596	2	17	35.23489932885906	0.920337905350168	0.4509582863585118	17	0	0.46296296296296297	9	0	0.43956043956043955	8	0	9.468599033816425	40	0.025	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021248	Chromosome_9A	4666	7	143	35.426489498499784	0.9776352303729513	0.975177304964539	143	0	1.4248704663212435	25	0	0.9172781854569713	118	0	0.8740564163686929	47	0	unmethylated (<10%)	Q8BN82	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	neurotransmitter loading into synaptic vesicle [GO:0098700]; response to bacterium [GO:0009617]; sialic acid transport [GO:0015739]	hit with GO BP
GN021247	Chromosome_9A	20957	10	304	34.57555947893305	0.48594073881522787	84.88124022187455	304	0.9506578947368421	89.40397350993378	29	0.9655172413793104	84.5325026808967	275	0.9490909090909091	64.52898550724638	46	0.6739130434782609	methylated (>=50%)	Q8BN82	Sialin (H(+)/nitrate cotransporter) (H(+)/sialic acid cotransporter) (AST) (Solute carrier family 17 member 5) (Vesicular excitatory amino acid transporter) (VEAT)	neurotransmitter loading into synaptic vesicle [GO:0098700]; response to bacterium [GO:0009617]; sialic acid transport [GO:0015739]	hit with GO BP
GN021246	Chromosome_9A	22833	26	256	35.334822406166516	0.36114012878161617	86.91420778576742	255	0.9254901960784314	84.9133261105092	82	0.8780487804878049	87.50803858520901	173	0.9479768786127167	44.449783757808746	41	0.43902439024390244	methylated (>=50%)	Q6PFX9	Poly [ADP-ribose] polymerase tankyrase-1 (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 5) (ARTD5) (Protein poly-ADP-ribosyltransferase tankyrase-1) (EC 2.4.2.-) (TRF1-interacting ankyrin-related ADP-ribose polymerase 1) (Tankyrase I) (Tankyrase-1) (TANK1)	negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric [GO:1904908]; negative regulation of telomere maintenance via telomere lengthening [GO:1904357]; peptidyl-serine phosphorylation [GO:0018105]; peptidyl-threonine phosphorylation [GO:0018107]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of telomere capping [GO:1904355]; positive regulation of telomere maintenance via telomerase [GO:0032212]; positive regulation of telomere maintenance via telomere lengthening [GO:1904358]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein auto-ADP-ribosylation [GO:0070213]; protein localization to chromosome, telomeric region [GO:0070198]; protein poly-ADP-ribosylation [GO:0070212]; protein polyubiquitination [GO:0000209]; regulation of telomere maintenance via telomerase [GO:0032210]	hit with GO BP
GN021245	Chromosome_9A	22645	7	344	35.30139103554868	0.4916763094144588	80.67351598173516	296	0.8581081081081081	92.85714285714286	16	1	80.1134328358209	280	0.85	31.803005008347245	48	0.2708333333333333	methylated (>=50%)	Q6DF30	Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC 1.3.1.20) (D-arabinose 1-dehydrogenase) (EC 1.1.1.-) (D-galactose 1-dehydrogenase) (EC 1.1.1.120) (D-glucose 1-dehydrogenase) (EC 1.1.1.119) (D-ribose 1-dehydrogenase) (EC 1.1.1.115) (D-xylose 1-dehydrogenase) (D-xylose-NADP dehydrogenase) (EC 1.1.1.179) (Dimeric dihydrodiol dehydrogenase)	D-xylose catabolic process [GO:0042843]	hit with GO BP
GN021244	Chromosome_9A	15992	14	174	33.0040020010005	0.40234814712313804	74.48232422643886	173	0.8959537572254336	63.0658897355446	39	0.8205128205128205	76.9149952244508	134	0.917910447761194	37.78337531486146	33	0.5454545454545454	methylated (>=50%)	B0BM20	Enolase 4 (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase)	glycolytic process [GO:0006096]	hit with GO BP
GN021243	Chromosome_9A	2186	3	93	39.70722781335773	1.0876669234720082	0.562962962962963	93	0	0.5934718100890207	87	0	0.29239766081871343	6	0	0.5130397605814451	43	0	unmethylated (<10%)	Q9SE95	FH protein interacting protein FIP2 (BTB/POZ domain-containing protein At5g55000)	protein homooligomerization [GO:0051260]; protein ubiquitination [GO:0016567]	hit with GO BP
GN021242	Chromosome_9A	2841	5	75	35.656458993312214	0.8402938810278737	0.36203775536591676	75	0	0.3715170278637771	32	0	0.3552397868561279	43	0	0.9398496240601504	50	0	unmethylated (<10%)	B3EWZ3	Coadhesin	NA	hit, no GO BP
GN021241	Chromosome_9A	439	2	7	40.09111617312073	0.4162264662061493	0.6116207951070336	7	0	0.6116207951070336	7	0	NA	NA	NA	0.8640552995391705	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021240	Chromosome_9A	8437	21	149	35.08356050728932	0.5902260404791998	0.6402209389907105	149	0	0.6220270764727406	50	0	0.6497229122874069	99	0	2.8180574555403557	58	0	unmethylated (<10%)	D3YXG0	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]; response to bacterium [GO:0009617]	hit with GO BP
GN021239	Chromosome_9A	14194	20	376	36.578836127941386	0.7933221699231567	0.5854148082069581	374	0	0.4037685060565276	94	0	0.6454963644457634	280	0	0.5057316250842886	55	0	unmethylated (<10%)	P35441	Thrombospondin-1 (Glycoprotein G)	behavioral response to pain [GO:0048266]; blood coagulation, fibrin clot formation [GO:0072378]; blood vessel morphogenesis [GO:0048514]; cell migration [GO:0016477]; cellular response to nitric oxide [GO:0071732]; endocardial cushion development [GO:0003197]; endothelial cell-cell adhesion [GO:0071603]; engulfment of apoptotic cell [GO:0043652]; growth plate cartilage development [GO:0003417]; inflammatory response [GO:0006954]; monocyte aggregation [GO:0070487]; negative regulation of angiogenesis [GO:0016525]; negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II [GO:0002581]; negative regulation of apoptotic process [GO:0043066]; negative regulation of blood vessel endothelial cell migration [GO:0043537]; negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis [GO:1903588]; negative regulation of cell migration involved in sprouting angiogenesis [GO:0090051]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of cell-matrix adhesion [GO:0001953]; negative regulation of dendritic cell antigen processing and presentation [GO:0002605]; negative regulation of endothelial cell chemotaxis [GO:2001027]; negative regulation of endothelial cell migration [GO:0010596]; negative regulation of endothelial cell proliferation [GO:0001937]; negative regulation of fibrinolysis [GO:0051918]; negative regulation of fibroblast growth factor receptor signaling pathway [GO:0040037]; negative regulation of interleukin-10 production [GO:0032693]; negative regulation of interleukin-12 production [GO:0032695]; negative regulation of long-chain fatty acid import across plasma membrane [GO:0010748]; negative regulation of nitric oxide-cGMP mediated signal transduction [GO:0141151]; negative regulation of plasminogen activation [GO:0010757]; negative regulation of receptor guanylyl cyclase signaling pathway [GO:0010754]; negative regulation of sprouting angiogenesis [GO:1903671]; negative regulation of tumor necrosis factor production [GO:0032720]; nitric oxide-cGMP-mediated signaling [GO:0038060]; outflow tract morphogenesis [GO:0003151]; positive regulation of angiogenesis [GO:0045766]; positive regulation of blood vessel endothelial cell migration [GO:0043536]; positive regulation of cell migration [GO:0030335]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cell-substrate adhesion [GO:0010811]; positive regulation of chemotaxis [GO:0050921]; positive regulation of endothelial cell apoptotic process [GO:2000353]; positive regulation of endothelial cell migration [GO:0010595]; positive regulation of extrinsic apoptotic signaling pathway via death domain receptors [GO:1902043]; positive regulation of fibroblast migration [GO:0010763]; positive regulation of macrophage activation [GO:0043032]; positive regulation of macrophage chemotaxis [GO:0010759]; positive regulation of MAPK cascade [GO:0043410]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of phosphorylation [GO:0042327]; positive regulation of reactive oxygen species metabolic process [GO:2000379]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of transforming growth factor beta production [GO:0071636]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; positive regulation of translation [GO:0045727]; positive regulation of tumor necrosis factor production [GO:0032760]; response to calcium ion [GO:0051592]; response to endoplasmic reticulum stress [GO:0034976]; response to glucose [GO:0009749]; response to magnesium ion [GO:0032026]; response to mechanical stimulus [GO:0009612]; sprouting angiogenesis [GO:0002040]	hit with GO BP
GN021238	Chromosome_9A	4000	9	123	38.025	0.8507871510389287	0.45701849836779107	119	0	0.37721614485099964	91	0	0.565843621399177	28	0	0.6045949214026602	63	0	unmethylated (<10%)	B3EWZ3	Coadhesin	NA	hit, no GO BP
GN021237	Chromosome_9A	13956	11	396	36.62940670679278	0.8465649832512182	2.2566555740432612	395	0	2.556249263753092	180	0	2.0199199478730336	215	0	1.4481409001956946	41	0	unmethylated (<10%)	Q8CGN4	BCL-6 corepressor (BCoR)	blastocyst hatching [GO:0001835]; chromatin remodeling [GO:0006338]; heart development [GO:0007507]; negative regulation of bone mineralization [GO:0030502]; negative regulation of DNA-templated transcription [GO:0045892]; negative regulation of tooth mineralization [GO:0070171]; negative regulation of transcription by RNA polymerase II [GO:0000122]; odontogenesis [GO:0042476]; roof of mouth development [GO:0060021]; specification of axis polarity [GO:0065001]	hit with GO BP
GN021236	Chromosome_9A	411	1	17	45.742092457420924	0.8061613014884043	0.7797270955165692	17	0	0.7797270955165692	17	0	NA	NA	NA	0.28776978417266186	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021235	Chromosome_9A	4757	3	140	39.352533109102374	0.7601895280177063	0.8422530268468152	139	0	1.2987012987012987	32	0	0.7163644504141482	107	0	0.3067484662576687	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021234	Chromosome_9A	4865	5	122	35.76567317574512	0.7868630344200377	0.9837409482169696	122	0	0.5131494547787043	36	0	1.1111111111111112	86	0	0.4125128910278446	61	0	unmethylated (<10%)	Q8IZJ3	C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8	eye development [GO:0001654]	hit with GO BP
GN021233	Chromosome_9A	2622	5	82	37.29977116704806	0.9098310707877721	0.7260891337005508	82	0	0.7330246913580247	54	0	0.7132667617689016	28	0	0.6838506049447659	41	0	unmethylated (<10%)	Q6GM59	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN012725	Chromosome_9A	762	1	11	39.23884514435696	0.381520254893036	NA	0	NA	NA	NA	NA	NA	NA	NA	43.75	1	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021227	Chromosome_9A	1528	4	12	34.882198952879584	0.2636755823986195	82.16463414634147	12	1	83.7465564738292	7	1	80.20477815699658	5	1	NA	NA	NA	methylated (>=50%)	P11979	Pyruvate kinase PKM (EC 2.7.1.40) (Pyruvate kinase muscle isozyme) (Threonine-protein kinase PKM2) (EC 2.7.11.1) (Tyrosine-protein kinase PKM2) (EC 2.7.10.2)	cellular response to insulin stimulus [GO:0032869]; glycolytic process [GO:0006096]; positive regulation of cytoplasmic translation [GO:2000767]; positive regulation of sprouting angiogenesis [GO:1903672]	hit with GO BP
GN021228	Chromosome_9A	2779	4	43	38.575026988125224	0.4190230731467845	84.34637801831806	43	1	89.47368421052632	23	1	79.7147385103011	20	1	85.68398727465535	23	0.9565217391304348	methylated (>=50%)	O62619	Pyruvate kinase (PK) (EC 2.7.1.40)	canonical glycolysis [GO:0061621]; glucose homeostasis [GO:0042593]; glycolytic process [GO:0006096]; pyruvate biosynthetic process [GO:0042866]; response to sucrose [GO:0009744]	hit with GO BP
GN021229	Chromosome_9A	8607	11	60	33.217148832345764	0.2533159361142723	67.27454409193105	60	0.8	47.46008708272859	11	0.7272727272727273	71.39408569704285	49	0.8163265306122449	31.913455037187287	29	0.3793103448275862	methylated (>=50%)	Q5EAY8	Transmembrane anterior posterior transformation protein 1 homolog	neural crest cell development [GO:0014032]; positive regulation of bone development [GO:1903012]; positive regulation of cartilage development [GO:0061036]; positive regulation of cilium assembly [GO:0045724]	hit with GO BP
GN021230	Chromosome_9A	18171	22	255	34.14781795168125	0.48934025945059534	85.3687707641196	249	0.9477911646586346	90.78141879726323	56	0.9642857142857143	84.14405605801353	193	0.9430051813471503	25.57377049180328	26	0.34615384615384615	methylated (>=50%)	Q6NZC7	SEC23-interacting protein	acrosome assembly [GO:0001675]; single fertilization [GO:0007338]; spermatid development [GO:0007286]	hit with GO BP
GN021225	Chromosome_9A	629	1	16	47.69475357710652	0.46006857142857144	0.4	14	0	0.4	14	0	NA	NA	NA	0.3665987780040733	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021224	Chromosome_9A	5780	8	188	35.069204152249135	1.0636315228966986	0.51405791019723035	187	0	0.6109022556390977	48	0	0.4862236628849271	139	0	0.6821282401091405	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021223	Chromosome_9A	1452	1	61	42.56198347107438	0.9323662852511132	0.5569837189374465	61	0	0.5569837189374465	61	0	NA	NA	NA	0.6650410108623365	62	0	unmethylated (<10%)	P20905	5-hydroxytryptamine receptor 1 (5-HT receptor) (5HT-dro) (Serotonin receptor 1)	adenylate cyclase-activating serotonin receptor signaling pathway [GO:0007192]; chemical synaptic transmission [GO:0007268]; courtship behavior [GO:0007619]; female mating behavior [GO:0060180]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; male courtship behavior, orientation prior to leg tapping and wing vibration [GO:0016543]; male courtship behavior, proboscis-mediated licking [GO:0016546]; male courtship behavior, veined wing vibration [GO:0016545]; male mating behavior [GO:0060179]; serotonin receptor signaling pathway [GO:0007210]	hit with GO BP
GN021221	Chromosome_9A	711	3	20	38.53727144866385	0.7577937649880095	0.5025125628140703	20	0	0.40214477211796246	15	0	0.8032128514056225	5	0	0.5139186295503212	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021222	Chromosome_9A	519	1	20	45.664739884393065	0.7398431931575196	1.1282051282051282	20	0	1.1282051282051282	20	0	NA	NA	NA	0.46452702702702703	32	0	unmethylated (<10%)	P22807	Homeobox protein slou (Homeobox protein NK-1) (Protein slouch) (S59/2)	cell differentiation [GO:0030154]; muscle cell fate determination [GO:0007521]; muscle organ development [GO:0007517]; negative regulation of transcription by RNA polymerase II [GO:0000122]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN021218	Chromosome_9A	18235	9	247	35.64025226213326	0.4266261502167493	82.72696591292609	247	0.9595141700404858	89.56521739130434	60	0.9666666666666667	81.39516129032258	187	0.9572192513368984	88.05566293003479	30	0.9666666666666667	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021217	Chromosome_9A	7480	5	141	35.45454545454545	0.6017115472387038	84.0584523414148	141	0.9361702127659575	61.86440677966102	8	0.625	85.60938055193651	133	0.9548872180451128	0.8090147356255417	74	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021216	Chromosome_9A	2962	4	24	34.36866981769075	0.27499661515251156	88.56812933025404	24	0.9583333333333334	93.42431761786601	12	1	84.34125269978402	12	0.9166666666666666	88.19196428571429	38	1	methylated (>=50%)	Q9Y251	Heparanase (EC 3.2.1.166) (Endo-glucoronidase) (Heparanase-1) (Hpa1) [Cleaved into: Heparanase 8 kDa subunit; Heparanase 50 kDa subunit]	angiogenesis involved in wound healing [GO:0060055]; cell-matrix adhesion [GO:0007160]; establishment of endothelial barrier [GO:0061028]; heparan sulfate proteoglycan catabolic process [GO:0030200]; heparin proteoglycan metabolic process [GO:0030202]; positive regulation of blood coagulation [GO:0030194]; positive regulation of hair follicle development [GO:0051798]; positive regulation of osteoblast proliferation [GO:0033690]; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction [GO:0051897]; positive regulation of vascular endothelial growth factor production [GO:0010575]; protein transmembrane transport [GO:0071806]; proteoglycan metabolic process [GO:0006029]; regulation of hair follicle development [GO:0051797]; response to antibiotic [GO:0046677]; vascular wound healing [GO:0061042]	hit with GO BP
GN021215	Chromosome_9A	849	1	36	51.11896348645465	0.6617159929853428	1.0680907877169559	36	0	1.0680907877169559	36	0	NA	NA	NA	0.4348876540227108	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021214	Chromosome_9A	732	1	22	47.540983606557376	0.5321877065432915	0.5649717514124294	22	0	0.5649717514124294	22	0	NA	NA	NA	0.5745388569700635	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021213	Chromosome_9A	732	1	22	47.540983606557376	0.5320646248389335	0.9784735812133072	22	0	0.9784735812133072	22	0	NA	NA	NA	0.6006006006006006	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021212	Chromosome_9A	732	1	20	46.721311475409834	0.5006839945280438	0.5988023952095808	20	0	0.5988023952095808	20	0	NA	NA	NA	0.3985651654045436	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021211	Chromosome_9A	555	1	13	46.306306306306304	0.45486067330727525	0.49627791563275436	13	0	0.49627791563275436	13	0	NA	NA	NA	0.6644518272425249	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021210	Chromosome_9A	630	2	10	39.36507936507937	0.43704474505723206	0.4618937644341801	10	0	0.9852216748768473	5	0	0	5	0	0.32299741602067183	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021209	Chromosome_9A	705	1	12	40.851063829787236	0.43060009161704077	0.7672634271099744	12	0	0.7672634271099744	12	0	NA	NA	NA	0.3192338387869114	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021208	Chromosome_9A	869	2	12	42.57767548906789	0.3342307692307692	0.8032128514056225	12	0	0.8032128514056225	12	0	NA	NA	NA	0.4192872117400419	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021207	Chromosome_9A	378	1	7	43.65079365079365	0.47710061305445367	0	7	0	0	7	0	NA	NA	NA	0.9237875288683602	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021206	Chromosome_9A	375	1	11	39.46666666666667	0.7736309077269318	0.4608294930875576	11	0	0.4608294930875576	11	0	NA	NA	NA	5.034423407917384	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001119	Chromosome_9A	183	1	17	48.08743169398907	1.7360491071428572	0.6535947712418301	17	0	0.6535947712418301	17	0	NA	NA	NA	5.882352941176471	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021197	Chromosome_9A	4690	2	82	37.42004264392324	0.5007969414117843	84.18125643666323	82	0.9390243902439024	90.02890173410404	13	1	83.20922411722316	69	0.927536231884058	17.072007629947546	39	0.07692307692307693	methylated (>=50%)	Q29R99	Octanoyl-[acyl-carrier-protein]:protein N-octanoyltransferase LIPT2, mitochondrial (Lipoate-protein ligase B) (Lipoyl/octanoyl transferase) (Lipoyltransferase 2) (EC 2.3.1.181) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase)	protein lipoylation [GO:0009249]	hit with GO BP
GN021196	Chromosome_9A	14358	21	400	37.74899011004318	0.782714749454824	0.6078561577361189	400	0	0.7387387387387387	130	0	0.5560704355885079	270	0	0.5527043031977892	48	0	unmethylated (<10%)	P21333	Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Alpha-filamin) (Endothelial actin-binding protein) (Filamin-1) (Non-muscle filamin)	actin crosslink formation [GO:0051764]; actin cytoskeleton organization [GO:0030036]; adenylate cyclase-inhibiting dopamine receptor signaling pathway [GO:0007195]; blood coagulation, intrinsic pathway [GO:0007597]; cerebral cortex development [GO:0021987]; cilium assembly [GO:0060271]; establishment of protein localization [GO:0045184]; establishment of Sertoli cell barrier [GO:0097368]; formation of radial glial scaffolds [GO:0021943]; megakaryocyte development [GO:0035855]; mitotic spindle assembly [GO:0090307]; mRNA transcription by RNA polymerase II [GO:0042789]; negative regulation of apoptotic process [GO:0043066]; negative regulation of protein catabolic process [GO:0042177]; negative regulation of transcription by RNA polymerase I [GO:0016479]; platelet aggregation [GO:0070527]; positive regulation of actin filament bundle assembly [GO:0032233]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of integrin-mediated signaling pathway [GO:2001046]; positive regulation of neural precursor cell proliferation [GO:2000179]; positive regulation of neuron migration [GO:2001224]; positive regulation of platelet activation [GO:0010572]; positive regulation of potassium ion transmembrane transport [GO:1901381]; positive regulation of protein import into nucleus [GO:0042307]; positive regulation of substrate adhesion-dependent cell spreading [GO:1900026]; protein localization to bicellular tight junction [GO:1902396]; protein localization to cell surface [GO:0034394]; protein localization to plasma membrane [GO:0072659]; protein stabilization [GO:0050821]; receptor clustering [GO:0043113]; regulation of cell migration [GO:0030334]; regulation of membrane repolarization during atrial cardiac muscle cell action potential [GO:1905000]; regulation of membrane repolarization during cardiac muscle cell action potential [GO:1905031]; release of sequestered calcium ion into cytosol [GO:0051209]; semaphorin-plexin signaling pathway [GO:0071526]; tubulin deacetylation [GO:0090042]; wound healing, spreading of cells [GO:0044319]	hit with GO BP
GN021195	Chromosome_9A	552	1	25	42.210144927536234	1.0210121337673868	0.9960159362549801	25	0	0.9960159362549801	25	0	NA	NA	NA	0.7824255191092386	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021194	Chromosome_9A	10704	4	223	36.43497757847533	0.6284847516239421	40.792602377807135	222	0.36486486486486486	8.93719806763285	9	0	41.99798921487981	213	0.38028169014084506	69.22033898305085	46	0.6521739130434783	sparse (10-50%)	Q8C436	Protein N-lysine methyltransferase METTL21D (EC 2.1.1.-) (Methyltransferase-like protein 21D) (VCP lysine methyltransferase) (VCP-KMT) (Valosin-containing protein lysine methyltransferase)	negative regulation of ATP-dependent activity [GO:0032780]; peptidyl-lysine methylation [GO:0018022]; peptidyl-lysine trimethylation [GO:0018023]	hit with GO BP
GN021193	Chromosome_9A	4927	3	45	32.63649279480414	0.34320357390529027	79.27063339731286	45	0.8666666666666667	80.1418439716312	3	1	79.22948073701842	42	0.8571428571428571	79.45707997065297	24	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021192	Chromosome_9A	987	1	50	46.20060790273556	0.9709215393090422	0.7751937984496124	50	0	0.7751937984496124	50	0	NA	NA	NA	0.4606879606879607	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021191	Chromosome_9A	7953	9	128	34.2637998239658	0.5485862096839382	85.53289342131573	128	0.984375	85.8195211786372	18	1	85.49798115746972	110	0.9818181818181818	80.4234918098282	30	0.8333333333333334	methylated (>=50%)	F4HYF3	Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial (EC 3.5.99.7) (EC 4.4.1.15) (1-aminocyclopropane-1-carboxylic acid deaminase 1) (AtACD1) (AtD-CDes1) (D-CDes1) (D-CDES)	ethylene biosynthetic process [GO:0009693]; stress response to cadmium ion [GO:1990170]	hit with GO BP
GN021190	Chromosome_9A	1206	1	51	41.29353233830846	0.9998211876391891	1.8888096935138987	51	0	1.8888096935138987	51	0	NA	NA	NA	48.08594714744381	62	0.3870967741935484	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021189	Chromosome_9A	16756	12	219	36.178085461924084	0.4030708642130172	88.31075237820697	219	0.9954337899543378	94.25029868578255	105	1	82.7715877437326	114	0.9912280701754386	82.21498371335505	19	0.9473684210526315	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021188	Chromosome_9A	706	2	16	37.39376770538244	0.6492327145238233	0.6779661016949152	16	0	0.7418397626112759	14	0	0.47393364928909953	2	0	0.420032310177706	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021187	Chromosome_9A	6350	3	162	33.732283464566926	0.8975813206756945	1.0184910511223177	162	0	1.0980966325036603	37	0	1.0060592203041043	125	0	0.5694760820045558	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021186	Chromosome_9A	4587	12	140	39.328537170263786	0.7897727272727273	0.4748338081671415	129	0	0.33044196612969845	87	0	0.6700167504187605	42	0	0.7149240393208222	60	0	unmethylated (<10%)	Q14315	Filamin-C (FLN-C) (FLNc) (ABP-280-like protein) (ABP-L) (Actin-binding-like protein) (Filamin-2) (Gamma-filamin)	sarcomere organization [GO:0045214]	hit with GO BP
GN021185	Chromosome_9A	2217	6	67	36.986919260261615	0.8851565153655004	0.6669006669006668	66	0	0.8615384615384616	43	0	0.4084967320261438	23	0	0.8703220191470844	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021184	Chromosome_9A	19071	23	601	37.76938807613654	0.8837805952851859	1.2190803783701756	560	0	0.9712586719524281	177	0	1.3039934800325998	383	0	0.648508430609598	49	0	unmethylated (<10%)	Q14315	Filamin-C (FLN-C) (FLNc) (ABP-280-like protein) (ABP-L) (Actin-binding-like protein) (Filamin-2) (Gamma-filamin)	sarcomere organization [GO:0045214]	hit with GO BP
GN002117	Chromosome_9A	288	1	6	47.22222222222222	0.375	0	6	0	0	6	0	NA	NA	NA	0.45366169799092676	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021182	Chromosome_9A	13669	10	327	34.45021581681176	0.8063172079380456	0.8668886236572649	317	0.0031545741324921135	0.6930289441500204	53	0	0.8985593346205257	264	0.003787878787878788	2.031454783748362	51	0	unmethylated (<10%)	Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN021181	Chromosome_9A	11248	6	118	34.83285917496444	0.350684491388009	73.66380504015508	118	0.8305084745762712	18.001368925393567	21	0.3333333333333333	87.7798993230342	97	0.9381443298969072	1.09217999126256	47	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021180	Chromosome_9A	7571	11	200	36.441685378417645	0.7973720739678186	1.2991302433116811	185	0	1.2195121951219512	56	0	1.3314754605976158	129	0	6.869324911172523	57	0	unmethylated (<10%)	Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN021179	Chromosome_9A	14497	11	335	34.65544595433538	0.7711386934818587	0.77542062911485	334	0	0.4519309778142975	49	0	0.8189917547451718	285	0	4.507405022537025	31	0	unmethylated (<10%)	Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN021178	Chromosome_9A	1448	1	45	44.68232044198895	0.6228850014338974	33.630289532293986	20	0.1	33.630289532293986	20	0.1	NA	NA	NA	27.290836653386453	23	0.043478260869565216	sparse (10-50%)	Q96DM1	PiggyBac transposable element-derived protein 4	NA	hit, no GO BP
GN021177	Chromosome_9A	14625	10	228	33.4974358974359	0.5631832682296065	84.0354276224744	228	0.9385964912280702	55.95238095238095	10	0.7	84.9802597699834	218	0.9495412844036697	0.7216494845360825	43	0	methylated (>=50%)	Q4VBI7	Syntaxin-18	intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN021175	Chromosome_9A	42749	38	612	35.67802755620014	0.45114534935052036	88.45306738597837	605	0.9487603305785124	89.73317865429235	84	0.9166666666666666	88.26517580951841	521	0.9539347408829175	56.45739910313901	35	0.6	methylated (>=50%)	Q9DE46	DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA polymerase alpha catalytic subunit p180)	DNA replication [GO:0006260]; DNA replication initiation [GO:0006270]; DNA replication, synthesis of primer [GO:0006269]; DNA strand elongation involved in DNA replication [GO:0006271]; DNA synthesis involved in DNA repair [GO:0000731]; double-strand break repair via nonhomologous end joining [GO:0006303]; lagging strand elongation [GO:0006273]; leading strand elongation [GO:0006272]; mitotic DNA replication initiation [GO:1902975]	hit with GO BP
GN021176	Chromosome_9A	7504	6	61	34.27505330490405	0.28029833563984174	81.10184731077325	48	0.9583333333333334	91.54929577464789	3	1	79.88316903979555	45	0.9555555555555556	69.09625275532697	38	0.5526315789473685	methylated (>=50%)	Q5TEA3	Dynein axonemal assembly factor 9 (DNAAF9) (Shulin)	NA	hit, no GO BP
GN021160	Chromosome_9A	6191	6	94	34.59861088677112	0.5103440534518033	88.52824184566428	94	0.9574468085106383	97.9020979020979	5	1	88.08134689114853	89	0.9550561797752809	86.61787767903816	22	0.9545454545454546	methylated (>=50%)	Q7ZUN8	Synaptobrevin homolog YKT6 (EC 2.3.1.-)	NA	hit, no GO BP
GN021161	Chromosome_9A	552	1	0	37.68115942028985	0	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN021162	Chromosome_9A	1719	1	2	39.49970913321699	0.02983908764255585	NA	0	NA	NA	NA	NA	NA	NA	NA	25.06043513295729	38	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021163	Chromosome_9A	8430	4	95	34.60260972716489	0.3781322152499398	48.80460183354305	94	0.5319148936170213	66.08996539792388	26	0.7307692307692307	44.27047878375312	68	0.45588235294117646	27.524893314367	23	0.30434782608695654	sparse (10-50%)	Q5ZKN5	Protein FAM53A (Dorsal neural-tube nuclear protein)	protein import into nucleus [GO:0006606]	hit with GO BP
GN021172	Chromosome_9A	2388	2	81	43.50921273031826	0.740711807550031	0.9654471544715447	78	0	1.478743068391867	55	0	0.33860045146726864	23	0	9.90990990990991	51	0.09803921568627451	unmethylated (<10%)	P08154	Early growth response protein 1 (EGR-1) (Nerve growth factor-induced protein A) (NGFI-A) (Transcription factor Zif268) (Zinc finger protein Krox-24)	BMP signaling pathway [GO:0030509]; cellular response to antibiotic [GO:0071236]; cellular response to cAMP [GO:0071320]; cellular response to follicle-stimulating hormone stimulus [GO:0071372]; cellular response to gamma radiation [GO:0071480]; cellular response to gonadotropin stimulus [GO:0071371]; cellular response to growth factor stimulus [GO:0071363]; cellular response to heparin [GO:0071504]; cellular response to hyperoxia [GO:0071455]; cellular response to hypoxia [GO:0071456]; cellular response to insulin stimulus [GO:0032869]; cellular response to interleukin-8 [GO:0098759]; cellular response to isoquinoline alkaloid [GO:0071317]; cellular response to mechanical stimulus [GO:0071260]; cellular response to mycophenolic acid [GO:0071506]; cellular response to steroid hormone stimulus [GO:0071383]; cellular response to xenobiotic stimulus [GO:0071466]; circadian regulation of gene expression [GO:0032922]; circadian rhythm [GO:0007623]; circadian temperature homeostasis [GO:0060086]; estrous cycle [GO:0044849]; glomerular mesangial cell proliferation [GO:0072110]; interleukin-1-mediated signaling pathway [GO:0070498]; learning or memory [GO:0007611]; locomotor rhythm [GO:0045475]; long-term memory [GO:0007616]; long-term synaptic potentiation [GO:0060291]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of transcription by RNA polymerase II [GO:0000122]; oligodendrocyte differentiation [GO:0048709]; positive regulation of chemokine production [GO:0032722]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of gene expression [GO:0010628]; positive regulation of gene expression via chromosomal CpG island demethylation [GO:0044029]; positive regulation of glomerular metanephric mesangial cell proliferation [GO:0072303]; positive regulation of hormone biosynthetic process [GO:0046886]; positive regulation of interleukin-1 beta production [GO:0032731]; positive regulation of miRNA transcription [GO:1902895]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of post-translational protein modification [GO:1901875]; positive regulation of smooth muscle cell migration [GO:0014911]; positive regulation of smooth muscle cell proliferation [GO:0048661]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of apoptotic process [GO:0042981]; regulation of DNA-templated transcription [GO:0006355]; regulation of long-term neuronal synaptic plasticity [GO:0048169]; regulation of progesterone biosynthetic process [GO:2000182]; regulation of protein sumoylation [GO:0033233]; regulation of transcription by RNA polymerase II [GO:0006357]; response to amphetamine [GO:0001975]; response to carbon monoxide [GO:0034465]; response to cocaine [GO:0042220]; response to electrical stimulus [GO:0051602]; response to ethanol [GO:0045471]; response to follicle-stimulating hormone [GO:0032354]; response to glucose [GO:0009749]; response to gonadotropin [GO:0034698]; response to hypoxia [GO:0001666]; response to insulin [GO:0032868]; response to ischemia [GO:0002931]; response to morphine [GO:0043278]; response to norepinephrine [GO:0071873]; response to nutrient levels [GO:0031667]; response to xenobiotic stimulus [GO:0009410]; skeletal muscle cell differentiation [GO:0035914]; T cell differentiation [GO:0030217]	hit with GO BP
GN021171	Chromosome_9A	2587	7	64	37.41785852338616	0.7076553531053524	0.5287009063444109	64	0	0.596816976127321	39	0	0.43859649122807015	25	0	0.6558641975308642	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021170	Chromosome_9A	550	3	11	34.54545454545455	0.673044832573145	0.5161290322580645	11	0	0.3115264797507788	9	0	1.5037593984962405	2	0	0.7515822784810127	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021169	Chromosome_9A	386	3	10	32.90155440414508	0.9645177411294353	0.6550218340611353	10	0	0.6097560975609756	8	0	0.7692307692307693	2	0	0.5021520803443329	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021168	Chromosome_9A	7341	3	230	38.70044953003678	0.837696049344005	1.1222488559599042	230	0	0.7848266841072596	30	0	1.189697999738528	200	0	0.5434782608695652	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021174	Chromosome_9A	651	1	28	42.3963133640553	0.9576044129235619	0.417910447761194	28	0	0.417910447761194	28	0	NA	NA	NA	1.5732546705998034	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021173	Chromosome_9A	5026	5	136	36.470354158376445	0.8156832046129319	1.486097794822627	136	0	1.7255546425636812	33	0	1.428288038087681	103	0	0.6213450292397661	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021164	Chromosome_9A	1273	2	62	41.476826394344066	1.1347768576029447	0.6322052807735218	62	0	0.6631299734748011	55	0	0.468384074941452	7	0	1.278149726110773	73	0	unmethylated (<10%)	P25931	RYamide receptor (Neuropeptide Y-like receptor) (NPY-R)	G protein-coupled receptor signaling pathway [GO:0007186]; neuropeptide signaling pathway [GO:0007218]	hit with GO BP
GN021165	Chromosome_9A	18027	11	235	36.64503245132302	0.39041919644338274	93.23799942512215	231	0.9826839826839827	95.85034013605443	62	1	92.53826530612245	169	0.9763313609467456	76.02836879432624	50	0.98	methylated (>=50%)	Q9SKB3	Poly(ADP-ribose) glycohydrolase 1 (EC 3.2.1.143)	ATP generation from poly-ADP-D-ribose [GO:1990966]; carbohydrate metabolic process [GO:0005975]; defense response to fungus [GO:0050832]; DNA damage response [GO:0006974]; nucleotide-sugar metabolic process [GO:0009225]; regulation of DNA repair [GO:0006282]; response to osmotic stress [GO:0006970]; response to oxidative stress [GO:0006979]; response to water deprivation [GO:0009414]; stomatal closure [GO:0090332]	hit with GO BP
GN021159	Chromosome_9A	704	2	9	36.22159090909091	0.3963963963963964	73.70517928286853	9	0.8888888888888888	78.33827893175074	7	1	64.24242424242425	2	0.5	94.22788605697151	36	1	methylated (>=50%)	M0R7T9	TBC1 domain family member 12	regulation of autophagosome assembly [GO:2000785]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN021158	Chromosome_9A	146	1	2	43.83561643835616	0.2922922922922923	57.5	2	1	57.5	2	1	NA	NA	NA	76.11940298507463	17	0.9411764705882353	NA	Q0IHY4	TBC1 domain family member 12	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN021167	Chromosome_9A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	75	3	1	NA	NA	NA	NA	no Swiss-Prot hit
GN021157	Chromosome_9A	2208	3	16	33.42391304347826	0.2597799870580622	90.8817635270541	16	1	93.18801089918256	6	1	89.54041204437401	10	1	89.14769719428269	27	1	methylated (>=50%)	Q0IHY4	TBC1 domain family member 12	vesicle-mediated transport [GO:0016192]	hit with GO BP
GN021156	Chromosome_9A	24329	11	233	33.48267499691726	0.34351930614718607	70.65747918461096	231	0.8354978354978355	79.11392405063292	18	1	70.17064431894092	213	0.8215962441314554	20.848056537102472	21	0.14285714285714285	methylated (>=50%)	Q9DAM9	Fibronectin type 3 and ankyrin repeat domains 1 protein (Germ cell-specific gene 1 protein) (GSG1)	negative regulation of apoptotic process [GO:0043066]; positive regulation of apoptotic process [GO:0043065]; positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN021155	Chromosome_9A	1944	2	85	43.51851851851852	1.0087912087912088	1.9629225736095965	84	0	0.586940572267058	64	0	5.944798301486199	20	0	7.2922252010723865	36	0.027777777777777776	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021154	Chromosome_9A	555	1	24	44.14414414414414	1.002710027100271	0.37523452157598497	24	0	0.37523452157598497	24	0	NA	NA	NA	0.5208333333333334	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021153	Chromosome_9A	492	1	22	42.68292682926829	1.129735935706085	0.17271157167530224	22	0	0.17271157167530224	22	0	NA	NA	NA	0.36496350364963503	91	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021152	Chromosome_9A	1068	1	15	41.947565543071164	0.3268053855569155	0.42462845010615713	15	0	0.42462845010615713	15	0	NA	NA	NA	0.966702470461869	30	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021151	Chromosome_9A	7786	9	99	34.21525815566401	0.438006300630063	89.70818951992469	99	1	91.38964577656675	32	1	89.0284203569068	67	1	59.492847854356306	29	0.7931034482758621	methylated (>=50%)	Q9Z0P7	Suppressor of fused homolog	aorta development [GO:0035904]; coronary vasculature development [GO:0060976]; determination of left/right symmetry [GO:0007368]; heart looping [GO:0001947]; maintenance of protein localization in organelle [GO:0072595]; negative regulation of smoothened signaling pathway [GO:0045879]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of ubiquitin-dependent protein catabolic process [GO:2000059]; neural tube closure [GO:0001843]; positive regulation of cellular response to drug [GO:2001040]; positive regulation of protein processing [GO:0010954]; regulation of DNA-templated transcription [GO:0006355]; skin development [GO:0043588]; smoothened signaling pathway [GO:0007224]; spermatid development [GO:0007286]; spinal cord dorsal/ventral patterning [GO:0021513]; ventricular septum development [GO:0003281]	hit with GO BP
GN021150	Chromosome_9A	4104	8	32	37.280701754385966	0.22502120368387235	52.53940455341506	32	0.5625	66.96832579185521	11	0.8181818181818182	47.52163650668765	21	0.42857142857142855	49.84051036682616	17	0.5294117647058824	methylated (>=50%)	Q96RW7	Hemicentin-1 (Fibulin-6) (FIBL-6)	actin cytoskeleton organization [GO:0030036]; basement membrane organization [GO:0071711]; heterophilic cell-cell adhesion [GO:0007157]; homophilic cell-cell adhesion [GO:0007156]	hit with GO BP
GN021149	Chromosome_9A	978	1	39	39.16155419222904	1.0416757701551234	0.6968641114982579	39	0	0.6968641114982579	39	0	NA	NA	NA	0	1	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021148	Chromosome_9A	498	1	21	41.16465863453815	1.0506329113924051	0.2546689303904924	21	0	0.2546689303904924	21	0	NA	NA	NA	0.6993006993006993	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021147	Chromosome_9A	9730	4	273	36.64953751284686	0.8359106529209622	0.6239081607187422	264	0	0.36737692872887584	28	0	0.6566604127579737	236	0	0.5406943653955606	50	0	unmethylated (<10%)	P04464	Calmodulin (CaM)	NA	hit, no GO BP
GN021146	Chromosome_9A	9266	5	115	34.80466220591409	0.4133709053357778	88.61150431089949	115	0.9826086956521739	90.9090909090909	9	1	88.40985442329227	106	0.9811320754716981	58.98123324396783	5	0.6	methylated (>=50%)	P15153	Ras-related C3 botulinum toxin substrate 2 (EC 3.6.5.2) (GX) (Small G protein) (p21-Rac2)	actin filament organization [GO:0007015]; bone resorption [GO:0045453]; chemotaxis [GO:0006935]; establishment or maintenance of cell polarity [GO:0007163]; lymphocyte aggregation [GO:0071593]; positive regulation of lamellipodium assembly [GO:0010592]; positive regulation of neutrophil chemotaxis [GO:0090023]; positive regulation of protein localization to mitochondrion [GO:1903749]; regulation of cell shape [GO:0008360]; regulation of cell-substrate adhesion [GO:0010810]; regulation of hydrogen peroxide metabolic process [GO:0010310]; regulation of mast cell chemotaxis [GO:0060753]; regulation of mast cell degranulation [GO:0043304]; regulation of neutrophil migration [GO:1902622]; regulation of respiratory burst [GO:0060263]; regulation of T cell proliferation [GO:0042129]; respiratory burst [GO:0045730]; signal transduction [GO:0007165]; small GTPase-mediated signal transduction [GO:0007264]; superoxide anion generation [GO:0042554]	hit with GO BP
GN021145	Chromosome_9A	1047	1	51	43.83954154727794	1.017318244170096	0.5134788189987163	51	0	0.5134788189987163	51	0	NA	NA	NA	0.5718370264474625	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021144	Chromosome_9A	10203	7	347	37.45957071449573	0.9725799579535181	4.684916406393533	344	0	0.8674101610904585	30	0	4.883391315552119	314	0	2.125124131082423	69	0.028985507246376812	unmethylated (<10%)	Q6GLT8	Oxaloacetate tautomerase fahd2, mitochondrial (EC 5.3.2.2) (Fumarylacetoacetate hydrolase domain-containing protein 2)	oxaloacetate metabolic process [GO:0006107]	hit with GO BP
GN021143	Chromosome_9A	10634	15	137	33.94771487681023	0.44873676143728036	87.00782511489255	135	0.9703703703703703	88.5814889336016	37	1	86.49183572488867	98	0.9591836734693877	51.8998658918194	39	0.46153846153846156	methylated (>=50%)	Q27245	Putative aminopeptidase W07G4.4 (EC 3.4.11.-)	proteolysis [GO:0006508]	hit with GO BP
GN021142	Chromosome_9A	471	1	20	41.40127388535032	1.0004248088360237	0.2840909090909091	20	0	0.2840909090909091	20	0	NA	NA	NA	0.9429726088908846	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021139	Chromosome_9A	26859	6	381	34.279012621467665	0.48421180388466106	75.4539762053851	375	0.8266666666666667	64.86068111455108	56	0.625	76.64576802507837	319	0.8620689655172413	0.5307855626326964	28	0	methylated (>=50%)	A0A0B7P9G0	Unextended protein (Putative metal transporter uex)	cellular response to carbon dioxide [GO:0071244]; export across plasma membrane [GO:0140115]; intracellular monoatomic ion homeostasis [GO:0006873]; long-term memory [GO:0007616]; magnesium ion homeostasis [GO:0010960]; magnesium ion transmembrane transport [GO:1903830]	hit with GO BP
GN021140	Chromosome_9A	20824	9	621	36.116980407222435	0.9146379656718584	0.9478219243657252	621	0	0.8839779005524862	89	0	0.9561609236875338	532	0	0.2789400278940028	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021141	Chromosome_9A	27656	9	767	36.24168354064218	0.8455297697131748	0.60427273159823	467	0	0.2927867979771094	90	0	0.6720741599073001	377	0	0.7535460992907801	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021137	Chromosome_9A	294	1	11	52.72108843537415	0.5485074626865671	2.102803738317757	11	0	2.102803738317757	11	0	NA	NA	NA	0.60790273556231	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021138	Chromosome_9A	5711	3	152	35.17772719313605	0.8614491787140464	0.6631861154226047	152	0	0.8885298869143781	36	0	0.6154898273209095	116	0	0.5839917554105118	51	0	unmethylated (<10%)	P18488	Homeotic protein empty spiracles	anterior head segmentation [GO:0035288]; axonogenesis [GO:0007409]; brain development [GO:0007420]; brain segmentation [GO:0035284]; cell differentiation [GO:0030154]; dendrite morphogenesis [GO:0048813]; embryonic development via the syncytial blastoderm [GO:0001700]; neuroblast development [GO:0014019]; open tracheal system development [GO:0007424]; pattern specification process [GO:0007389]; regulation of gene expression [GO:0010468]; regulation of transcription by RNA polymerase II [GO:0006357]; spiracle morphogenesis, open tracheal system [GO:0035277]; ventral cord development [GO:0007419]	hit with GO BP
GN021132	Chromosome_9A	4081	3	99	32.0264641019358	0.9498730427422768	0.6273312987453374	99	0	0.805951642901426	30	0	0.5600933488914819	69	0	0.5889281507656066	43	0	unmethylated (<10%)	Q04743	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles-like protein 2)	brain development [GO:0007420]; central nervous system development [GO:0007417]; neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]; stereocilium bundle organization [GO:0160194]	hit with GO BP
GN021133	Chromosome_9A	5044	4	104	33.86201427438541	0.7199385155906896	25.685210312075984	97	0.38144329896907214	63.89261744966443	14	0.7857142857142857	21.38867924528302	83	0.3132530120481928	81.79681378950117	39	0.9487179487179487	sparse (10-50%)	Q6TXG9	Swi5-dependent recombination DNA repair protein 1 homolog (Liver regeneration-related protein LRRGT00030) (Meiosis protein 5 homolog)	cellular response to estrogen stimulus [GO:0071391]; double-strand break repair via homologous recombination [GO:0000724]; positive regulation of DNA-templated transcription [GO:0045893]	hit with GO BP
GN021134	Chromosome_9A	23193	26	312	34.484542749967666	0.45317934713685437	86.94052442829863	310	0.9451612903225807	86.91631992602866	33	0.9090909090909091	86.9432359643671	277	0.9494584837545126	52.23184543637575	26	0.6538461538461539	methylated (>=50%)	Q6PGW3	Armadillo-like helical domain-containing protein 3	regulation of Golgi organization [GO:1903358]	hit with GO BP
GN021135	Chromosome_9A	31349	14	382	35.57051261603241	0.38542467199541686	81.08662224500256	360	0.9305555555555556	85.18735362997658	32	1	80.73204070267808	328	0.9237804878048781	81.34171907756813	27	0.9629629629629629	methylated (>=50%)	Q0D2E8	Man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1 (Protein RFT1 homolog)	dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; glycolipid translocation [GO:0034203]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN021136	Chromosome_9A	18188	12	382	37.23334066417418	0.6082538415206399	86.24880565641124	380	0.9315789473684211	85.77138289368506	22	0.8636363636363636	86.27277835754997	358	0.9357541899441341	1.7843137254901962	60	0	methylated (>=50%)	Q5ZJK8	T-complex protein 1 subunit eta (TCP-1-eta) (EC 3.6.1.-) (CCT-eta)	protein folding [GO:0006457]	hit with GO BP
GN021131	Chromosome_9A	17880	13	241	34.40156599552573	0.4559714752757788	79.64125560538116	240	0.8958333333333334	74.4982290436836	13	0.6923076923076923	79.96043376318875	227	0.9074889867841409	65.09677419354838	39	0.6410256410256411	methylated (>=50%)	Q8BP78	Protein FRA10AC1 homolog	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN021130	Chromosome_9A	6514	8	88	32.575990175007675	0.5111912713523251	78.54382439326017	88	0.8636363636363636	76.8796992481203	9	0.7777777777777778	78.6929425635843	79	0.8734177215189873	41.65067178502879	37	0.43243243243243246	methylated (>=50%)	Q9Y3B2	Exosome complex component CSL4 (Exosome component 1)	RNA catabolic process [GO:0006401]; RNA processing [GO:0006396]	hit with GO BP
GN021129	Chromosome_9A	9048	10	136	34.58222811671087	0.50407098206605	91.0160110693813	134	0.9925373134328358	89.97569866342648	34	0.9705882352941176	91.21813031161473	100	1	93.65502532657958	47	0.9787234042553191	methylated (>=50%)	Q6NZN1	Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PGC-1-related coactivator) (PRC)	energy homeostasis [GO:0097009]; positive regulation of transcription by RNA polymerase II [GO:0045944]	hit with GO BP
GN021128	Chromosome_9A	24943	16	616	36.74377580884416	0.7329388807042523	1.8421346432957464	606	0.0016501650165016502	0.6926629040533607	78	0	1.9824616348261823	528	0.001893939393939394	0.6240822320117474	44	0	unmethylated (<10%)	Q695T7	Sodium-dependent neutral amino acid transporter B(0)AT1 (Solute carrier family 6 member 19) (System B(0) neutral amino acid transporter AT1)	amino acid import across plasma membrane [GO:0089718]; amino acid transport [GO:0006865]; neurotransmitter transport [GO:0006836]; neutral amino acid transport [GO:0015804]; response to nutrient [GO:0007584]; sodium ion transmembrane transport [GO:0035725]; viral life cycle [GO:0019058]	hit with GO BP
GN021127	Chromosome_9A	1039	3	32	37.34359961501444	0.888034188034188	0.5191434133679429	32	0	0.5253940455341506	26	0	0.5012531328320802	6	0	0.6925207756232687	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN004716	Chromosome_9A	1368	1	61	47.58771929824562	0.78828641602116	4.193548387096774	13	0	4.193548387096774	13	0	NA	NA	NA	2.8595696489241225	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021126	Chromosome_9A	5887	3	133	34.075080686257856	0.778668854578454	1.4168270071715936	124	0	0.5249343832020997	24	0	1.639702667249672	100	0	0.16216216216216217	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021125	Chromosome_9A	2696	3	90	39.61424332344214	0.8509772700969028	0.32786885245901637	28	0	0.49019607843137253	12	0	0.24630541871921183	16	0	1.3793103448275863	8	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021111	Chromosome_9A	6018	3	107	38.152210036556994	0.48868199311061344	78.22393822393822	75	0.8	58.72832369942196	15	0.6	82.13209733487834	60	0.85	37.674216027874564	31	0.3225806451612903	methylated (>=50%)	Q95KE5	Large ribosomal subunit protein mL43 (39S ribosomal protein L43, mitochondrial) (L43mt) (MRP-L43) (Retina-specific 15.7 kDa protein)	mitochondrial translation [GO:0032543]	hit with GO BP
GN021112	Chromosome_9A	8352	11	86	32.986111111111114	0.3831695432620239	80.31245018332537	86	0.8604651162790697	71.11882046834346	35	0.7142857142857143	85.6566675069322	51	0.9607843137254902	59.6238397655105	56	0.5535714285714286	methylated (>=50%)	A2BGP7	Coiled-coil domain-containing protein 125	negative regulation of cell motility [GO:2000146]; negative regulation of Rho protein signal transduction [GO:0035024]	hit with GO BP
GN021113	Chromosome_9A	2055	2	28	42.092457420924575	0.3080563645708412	96.44779332615715	28	1	96.44779332615715	28	1	NA	NA	NA	35.553379040156706	17	0.35294117647058826	methylated (>=50%)	Q8C0T1	Protein fem-1 homolog A-like (FEM1-alpha-B) (Protein fem-1 homolog A-B) (FEM1a-B)	MAPK cascade [GO:0000165]; negative regulation of inflammatory response [GO:0050728]; positive regulation of inflammatory response [GO:0050729]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway [GO:0140627]	hit with GO BP
GN021114	Chromosome_9A	3305	2	61	38.3661119515885	0.5017708387777604	82.82060145178016	61	0.9016393442622951	77.91828793774319	46	0.8695652173913043	94.8626045400239	15	1	52.8003613369467	71	0.7746478873239436	methylated (>=50%)	Q80UM7	Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106) (Endoplasmic reticulum alpha-glucosidase I) (ER glu I) (Glucosidase 1) (Glycoprotein-processing glucosidase I)	oligosaccharide metabolic process [GO:0009311]	hit with GO BP
GN021115	Chromosome_9A	25369	24	339	36.01639796602152	0.41263706842697695	90.59841179807147	334	0.9820359281437125	95.11315185306658	59	1	89.83818412768542	275	0.9781818181818182	18.374259102455547	35	0.2857142857142857	methylated (>=50%)	Q7ZUV7	BRCA2-interacting transcriptional repressor EMSY	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN021116	Chromosome_9A	10276	8	176	35.714285714285715	0.5375601590290856	82.54808540674078	176	0.9829545454545454	87.22627737226277	25	0.96	81.90485748695303	151	0.9867549668874173	77.73174520973589	29	0.8620689655172413	methylated (>=50%)	Q7KZN9	Heme A synthase COX15 (HAS) (EC 1.17.99.9) (Cytochrome c oxidase assembly protein COX15 homolog)	cytochrome complex assembly [GO:0017004]; heme A biosynthetic process [GO:0006784]; heme biosynthetic process [GO:0006783]	hit with GO BP
GN021117	Chromosome_9A	14646	7	162	35.55236924757613	0.3506957890822277	79.16716813094236	147	0.8299319727891157	84.63047743623284	33	0.9696969696969697	77.93510324483776	114	0.7894736842105263	44.740437158469945	28	0.4642857142857143	methylated (>=50%)	A6QP16	Ubiquitin thioesterase ZRANB1 (EC 3.4.19.12) (Zinc finger Ran-binding domain-containing protein 1)	positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of Wnt signaling pathway [GO:0030177]; protein deubiquitination involved in ubiquitin-dependent protein catabolic process [GO:0071947]; protein K29-linked deubiquitination [GO:0035523]; protein K33-linked deubiquitination [GO:1990168]; protein K63-linked deubiquitination [GO:0070536]	hit with GO BP
GN021118	Chromosome_9A	33486	8	484	35.4745266678612	0.4622460277395121	77.01488192700943	428	0.822429906542056	88.93442622950819	32	1	76.22502424830262	396	0.8080808080808081	52.138728323699425	28	0.5714285714285714	methylated (>=50%)	O19071	Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (EC 2.4.1.143) (Beta-1,2-N-acetylglucosaminyltransferase II) (GlcNAc-T II) (GNT-II) (Mannoside acetylglucosaminyltransferase 2) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II)	oligosaccharide biosynthetic process [GO:0009312]; protein N-linked glycosylation [GO:0006487]	hit with GO BP
GN021119	Chromosome_9A	15491	14	180	36.743915822090244	0.3444474132720429	82.54786450662739	178	0.898876404494382	89.57703927492447	53	0.9433962264150944	80.97544492002703	125	0.88	34.973753280839894	43	0.37209302325581395	methylated (>=50%)	Q9P2N6	KAT8 regulatory NSL complex subunit 3 (NSL complex protein NSL3) (Non-specific lethal 3 homolog) (Serum inhibited-related protein) (Testis development protein PRTD)	positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of mitochondrial transcription [GO:1903108]	hit with GO BP
GN021120	Chromosome_9A	1313	3	17	31.683168316831683	0.517948717948718	92.27188081936686	17	0.9411764705882353	65.9090909090909	3	0.6666666666666666	94.62474645030426	14	1	90.33457249070632	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021276	Chromosome_9A	272	1	1	43.01470588235294	0.07953216374269007	NA	0	NA	NA	NA	NA	NA	NA	NA	0.9532062391681109	46	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021110	Chromosome_9A	12383	12	370	37.559557457805056	0.8492048811427144	1.241861586689173	370	0	0.7073386383731212	50	0	1.3262599469496021	320	0	0.39592760180995473	44	0	unmethylated (<10%)	H3ZPL1	Aromatic-amino-acid aminotransferase 1 (ARAT-I) (AROAT) (EC 2.6.1.57)	alpha-amino acid metabolic process [GO:1901605]	hit with GO BP
GN021109	Chromosome_9A	3611	6	110	39.0473553032401	0.8001813053988719	0.9688090737240076	109	0	1.6161616161616161	29	0	0.7711289327575571	80	0	0.9070294784580499	53	0	unmethylated (<10%)	Q8TC12	Retinol dehydrogenase 11 (EC 1.1.1.300) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) (Prostate short-chain dehydrogenase/reductase 1) (Retinal reductase 1) (RalR1) (Short chain dehydrogenase/reductase family 7C member 1)	cellular detoxification of aldehyde [GO:0110095]; retinal metabolic process [GO:0042574]; retinoid metabolic process [GO:0001523]; retinol metabolic process [GO:0042572]; visual perception [GO:0007601]	hit with GO BP
GN021108	Chromosome_9A	21406	16	224	36.036625245258335	0.3223458609131617	75.97558466497497	190	0.8631578947368421	75.4575707154742	20	0.75	76.02212422453098	170	0.8764705882352941	45.838359469240046	25	0.48	methylated (>=50%)	Q676U5	Autophagy-related protein 16-1 (APG16-like 1)	autophagosome assembly [GO:0000045]; axonal transport [GO:0098930]; C-terminal protein lipidation [GO:0006501]; defense response to virus [GO:0051607]; macroautophagy [GO:0016236]; microautophagy [GO:0016237]; positive regulation of autophagy [GO:0010508]; protein localization to phagophore assembly site [GO:0034497]	hit with GO BP
GN021107	Chromosome_9A	1935	1	54	41.13695090439276	0.6647834634397725	1.955671447196871	54	0	1.955671447196871	54	0	NA	NA	NA	1.9516728624535316	35	0	unmethylated (<10%)	Q56R14	E3 ubiquitin-protein ligase TRIM33 (EC 2.3.2.27) (Ectodermin) (RING-type E3 ubiquitin transferase TRIM33) (Transcription intermediary factor 1-gamma) (TIF1-gamma) (Tripartite motif-containing protein 33)	protein ubiquitination [GO:0016567]	hit with GO BP
GN021106	Chromosome_9A	714	1	17	38.79551820728291	0.646945954589063	0.6094182825484764	17	0	0.6094182825484764	17	0	NA	NA	NA	0.9986320109439124	77	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021105	Chromosome_9A	20047	24	309	36.040305282585926	0.4754310983971788	88.93109695517504	284	0.9577464788732394	91.84933621488113	59	0.9661016949152542	88.24971164936562	225	0.9555555555555556	0.7398273736128237	39	0	methylated (>=50%)	O73787	Gamma-tubulin complex component 3 homolog (Gamma-ring complex protein 109) (Xgrip109) (x109p)	cytoplasmic microtubule organization [GO:0031122]; meiotic cell cycle [GO:0051321]; microtubule nucleation [GO:0007020]; mitotic cell cycle [GO:0000278]; spindle assembly [GO:0051225]	hit with GO BP
GN021104	Chromosome_9A	21004	8	207	34.76004570557989	0.3280508121615993	88.33895188476862	207	0.9516908212560387	87.04566635601118	24	0.9583333333333334	88.45479589281243	183	0.9508196721311475	91.75646551724138	28	1	methylated (>=50%)	Q9R062	Glycogenin-1 (GN-1) (GN1) (EC 2.4.1.186)	glycogen biosynthetic process [GO:0005978]; glycogen biosynthetic process via UDP-glucose [GO:0160249]	hit with GO BP
GN021103	Chromosome_9A	2361	2	96	44.5150360016942	0.8385411656764016	0.8087343307723412	96	0	0.8087343307723412	96	0	NA	NA	NA	25.87476979742173	61	0.29508196721311475	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021102	Chromosome_9A	6653	4	89	33.93957613106869	0.46530873656706156	75.69624352331606	89	0.8651685393258427	83.88520971302428	8	0.875	75.04805172112529	81	0.8641975308641975	0.6647673314339981	51	0	methylated (>=50%)	Q58DA7	Glutaredoxin-3 (PKC-interacting cousin of thioredoxin) (PICOT) (Thioredoxin-like protein 2)	intracellular iron ion homeostasis [GO:0006879]; negative regulation of cardiac muscle hypertrophy [GO:0010614]; regulation of the force of heart contraction [GO:0002026]	hit with GO BP
GN021101	Chromosome_9A	3527	7	33	35.15735752764389	0.30354502280675677	86.23417721518987	33	0.9696969696969697	84.93377483443709	12	1	86.84210526315789	21	0.9523809523809523	94.17808219178082	7	1	methylated (>=50%)	Q5XJ54	Glutaredoxin 3	hemoglobin metabolic process [GO:0020027]; intracellular iron ion homeostasis [GO:0006879]; multicellular organismal-level iron ion homeostasis [GO:0060586]	hit with GO BP
GN021100	Chromosome_9A	9615	13	192	35.85023400936038	0.6260041573555692	89.68149264983037	192	1	90.92864826102546	56	1	89.23686565256295	136	1	88.34355828220859	21	1	methylated (>=50%)	Q9VTZ5	Transferrin 2 (Melanotransferrin)	iron ion transport [GO:0006826]; septate junction assembly [GO:0019991]	hit with GO BP
GN021099	Chromosome_9A	46070	18	387	37.47992185804211	0.24296727820050368	82.05709634281062	296	0.9087837837837838	88.78827080638206	54	1	81.00806451612904	242	0.8884297520661157	91.87396351575455	44	1	methylated (>=50%)	A4FUB0	Uncharacterized protein C5orf34 homolog	NA	hit, no GO BP
GN021098	Chromosome_9A	1206	1	52	42.95190713101161	0.936265508129171	0.39603960396039606	52	0	0.39603960396039606	52	0	NA	NA	NA	0.4990403071017274	122	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021097	Chromosome_9A	4824	4	109	36.007462686567166	0.6971504940098324	82.78949950932287	109	0.9357798165137615	16.49484536082474	10	0.3	90.74048633053991	99	1	41.917140536149475	50	0.5	methylated (>=50%)	Q6NTV9	H/ACA ribonucleoprotein complex subunit 2-like protein (Nucleolar protein family A member 2-like protein) (snoRNP protein NHP2-like protein)	rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN021096	Chromosome_9A	294	1	16	49.65986394557823	0.9116279069767442	6.161137440758294	16	0	6.161137440758294	16	0	NA	NA	NA	0.9020217729393468	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021095	Chromosome_9A	996	1	46	51.506024096385545	0.703886925795053	0.7419620774938169	46	0	0.7419620774938169	46	0	NA	NA	NA	2.0839121978327313	44	0	unmethylated (<10%)	P48430	Transcription factor SOX-2 (cSox2) (delta EF2a)	brain development [GO:0007420]; cell fate commitment [GO:0045165]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of transcription by RNA polymerase II [GO:0000122]; neuron differentiation [GO:0030182]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of transcription by RNA polymerase II [GO:0045944]; sensory organ precursor cell fate determination [GO:0016360]	hit with GO BP
GN021094	Chromosome_9A	12268	9	119	33.15943919139224	0.35315066352484464	89.90481297761094	116	1	91.63952225841477	17	1	89.6604466197614	99	1	90.95816464237517	11	1	methylated (>=50%)	Q8R3N1	Nucleolar protein 14 (Nucleolar complex protein 14)	maturation of SSU-rRNA [GO:0030490]; protein localization to nucleolus [GO:1902570]; ribosomal small subunit biogenesis [GO:0042274]	hit with GO BP
GN021093	Chromosome_9A	13982	8	174	33.600343298526674	0.445032080450361	80.44038742944743	174	0.9252873563218391	95.14462809917356	14	1	79.37682134050661	160	0.91875	91.99644286349489	52	0.9807692307692307	methylated (>=50%)	P78316	Nucleolar protein 14 (Nucleolar complex protein 14)	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000480]; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000472]; maturation of SSU-rRNA [GO:0030490]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; protein localization to nucleolus [GO:1902570]; ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]	hit with GO BP
GN021092	Chromosome_9A	348	1	1	41.95402298850575	0.06904761904761905	33.92857142857143	1	0	33.92857142857143	1	0	NA	NA	NA	77.33952049497293	21	0.9523809523809523	NA	NA	NA	NA	no Swiss-Prot hit
GN001585	Chromosome_9A	774	1	32	42.76485788113695	0.9299391754899752	4.459798994974874	32	0	4.459798994974874	32	0	NA	NA	NA	1.3282732447817838	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021089	Chromosome_9A	11743	2	196	33.824406029123736	0.5874569162664576	79.33884297520662	162	0.9074074074074074	90.54441260744986	42	1	76.8103448275862	120	0.875	66.32462686567165	18	0.8333333333333334	methylated (>=50%)	P14842	5-hydroxytryptamine receptor 2A (5-HT-2) (5-HT-2A) (Serotonin receptor 2A)	artery smooth muscle contraction [GO:0014824]; behavioral response to cocaine [GO:0048148]; chemical synaptic transmission [GO:0007268]; detection of mechanical stimulus involved in sensory perception of pain [GO:0050966]; detection of temperature stimulus involved in sensory perception of pain [GO:0050965]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; G protein-coupled serotonin receptor signaling pathway [GO:0098664]; intracellular calcium ion homeostasis [GO:0006874]; memory [GO:0007613]; negative regulation of potassium ion transport [GO:0043267]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; phospholipase C-activating serotonin receptor signaling pathway [GO:0007208]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of cytokine production involved in immune response [GO:0002720]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; positive regulation of DNA biosynthetic process [GO:2000573]; positive regulation of ERK1 and ERK2 cascade [GO:0070374]; positive regulation of execution phase of apoptosis [GO:1900119]; positive regulation of fat cell differentiation [GO:0045600]; positive regulation of glycolytic process [GO:0045821]; positive regulation of heat generation [GO:0031652]; positive regulation of inflammatory response [GO:0050729]; positive regulation of MAP kinase activity [GO:0043406]; positive regulation of neuron apoptotic process [GO:0043525]; positive regulation of peptidyl-tyrosine phosphorylation [GO:0050731]; positive regulation of phosphatidylinositol biosynthetic process [GO:0010513]; positive regulation of platelet aggregation [GO:1901731]; positive regulation of vasoconstriction [GO:0045907]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; protein localization to cytoskeleton [GO:0044380]; regulation of dopamine secretion [GO:0014059]; release of sequestered calcium ion into cytosol [GO:0051209]; response to cocaine [GO:0042220]; response to xenobiotic stimulus [GO:0009410]; sensitization [GO:0046960]; sensory perception of temperature stimulus [GO:0050951]; serotonin receptor signaling pathway [GO:0007210]; temperature homeostasis [GO:0001659]; urinary bladder smooth muscle contraction [GO:0014832]	hit with GO BP
GN021088	Chromosome_9A	10543	2	141	35.511713933415535	0.42676135305031726	80.41321190702732	139	0.9280575539568345	74.125	20	0.85	81.18041787402775	119	0.9411764705882353	44.558521560574945	8	0.5	methylated (>=50%)	O73810	Dopamine receptor D2 (Dopamine D2 receptor)	adenylate cyclase-inhibiting dopamine receptor signaling pathway [GO:0007195]; hyaloid vascular plexus regression [GO:1990384]; negative regulation of calcium ion transport into cytosol [GO:0010523]; negative regulation of peptide hormone secretion [GO:0090278]; negative regulation of synaptic transmission, glutamatergic [GO:0051967]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]; regulation of defecation [GO:2000292]; regulation of dopamine secretion [GO:0014059]; regulation of potassium ion transport [GO:0043266]	hit with GO BP
GN021087	Chromosome_9A	28265	18	438	35.3511409870865	0.49956032483665924	83.77545366394237	433	0.9630484988452656	84.24162836506895	37	0.918918918918919	83.749497312909	396	0.9671717171717171	1.1146496815286624	48	0	methylated (>=50%)	Q3SZ40	Probable ATP-dependent RNA helicase DDX56 (EC 3.6.4.13) (DEAD box protein 56)	NA	hit, no GO BP
GN021086	Chromosome_9A	21903	13	276	35.91745423001415	0.39151611081463367	86.69884386575373	264	0.9393939393939394	84.04568901989683	55	0.8545454545454545	87.17558262711864	209	0.9617224880382775	3.6945812807881775	66	0	methylated (>=50%)	O43143	ATP-dependent RNA helicase DHX15 (EC 3.6.4.13) (ATP-dependent RNA helicase #46) (DEAH box protein 15) (Splicing factor Prp43) (hPrp43)	antiviral innate immune response [GO:0140374]; defense response to bacterium [GO:0042742]; defense response to virus [GO:0051607]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; response to alkaloid [GO:0043279]; response to toxic substance [GO:0009636]; RNA splicing [GO:0008380]	hit with GO BP
GN021084	Chromosome_9A	711	2	22	39.24050632911393	0.8083720930232559	0.3937007874015748	22	0	0.5018820577164367	18	0	0	4	0	0.7438894792773645	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021083	Chromosome_9A	711	1	0	34.177215189873415	0	NA	0	NA	NA	NA	NA	NA	NA	NA	0.4716981132075472	43	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021082	Chromosome_9A	72589	30	1007	35.43925388144209	0.4431160563111982	88.11497773318547	965	0.9844559585492227	92.76288659793815	88	0.9886363636363636	87.68114547449048	877	0.984036488027366	92.85549665821618	47	1	methylated (>=50%)	F4IF36	Protein FORGETTER 1 (Protein EMBRYO DEFECTIVE 1135)	chromatin remodeling [GO:0006338]; epigenetic regulation of gene expression [GO:0040029]; heat acclimation [GO:0010286]; positive regulation of cellular response to heat [GO:1900036]; regulation of DNA-templated transcription [GO:0006355]; response to heat [GO:0009408]	hit with GO BP
GN021081	Chromosome_9A	4876	5	151	36.44380639868745	0.9358092478202293	0.7020623080298376	151	0	0.5750798722044729	28	0	0.7397572078907435	123	0	1.0738255033557047	67	0	unmethylated (<10%)	Q6NZW8	ADP-ribosylation factor-like protein 8B-A	anterograde axonal transport [GO:0008089]; autophagosome-lysosome fusion [GO:0061909]; late endosome to lysosome transport [GO:1902774]; lysosome localization [GO:0032418]; protein transport [GO:0015031]	hit with GO BP
GN021080	Chromosome_9A	11637	3	305	34.08954197817307	0.9025403364229316	1.79375	304	0	1.3671875	50	0	1.8390486725663717	254	0	0.6170834686586554	46	0	unmethylated (<10%)	Q90788	Homeobox protein Nkx-2.5 (cNKx-2.5) (Homeobox protein NK-2 homolog E)	adult heart development [GO:0007512]; atrial cardiac muscle tissue development [GO:0003228]; atrial septum morphogenesis [GO:0060413]; atrioventricular node development [GO:0003162]; cardiac muscle cell development [GO:0055013]; cell differentiation [GO:0030154]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; negative regulation of cardiac muscle cell apoptotic process [GO:0010667]; negative regulation of myotube differentiation [GO:0010832]; negative regulation of transcription by RNA polymerase II [GO:0000122]; outflow tract septum morphogenesis [GO:0003148]; positive regulation of cardioblast differentiation [GO:0051891]; positive regulation of gene expression [GO:0010628]; positive regulation of heart contraction [GO:0045823]; positive regulation of neuron differentiation [GO:0045666]; positive regulation of sodium ion transport [GO:0010765]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; regulation of cardiac conduction [GO:1903779]; regulation of cardiac muscle contraction [GO:0055117]; regulation of transcription by RNA polymerase II [GO:0006357]; response to BMP [GO:0071772]; right ventricular cardiac muscle tissue morphogenesis [GO:0003221]; septum secundum development [GO:0003285]; spleen development [GO:0048536]; thyroid gland development [GO:0030878]; ventricular septum morphogenesis [GO:0060412]	hit with GO BP
GN021079	Chromosome_9A	6710	3	77	34.76900149031297	0.3818021932547072	85.42319749216301	77	0.987012987012987	92.65850945494995	17	1	83.87633769322235	60	0.9833333333333333	32.55156823961571	45	0.37777777777777777	methylated (>=50%)	Q8N9I9	E3 ubiquitin-protein ligase DTX3 (EC 2.3.2.27) (Protein deltex-3) (Deltex3) (RING finger protein 154) (RING-type E3 ubiquitin transferase DTX3)	Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN021078	Chromosome_9A	1298	3	51	44.99229583975347	0.7781774580335732	0.8676789587852495	44	0	0.2247191011235955	20	0	1.1727078891257996	24	0	0.402046783625731	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021075	Chromosome_9A	5449	5	154	36.30023857588549	0.8593933062963418	0.4333694474539545	154	0	0.21920210434020165	47	0	0.5291005291005291	107	0	0.9935205183585313	55	0	unmethylated (<10%)	Q8R0M8	Probable monocarboxylate transporter 5 (MCT 5)	carboxylic acid transmembrane transport [GO:1905039]	hit with GO BP
GN021070	Chromosome_9A	22787	12	631	36.029314960284374	0.8533753367912057	0.8499957214980461	612	0	0.5538461538461539	80	0	0.8802540161589487	532	0	1.0909090909090908	50	0	unmethylated (<10%)	Q9WTW8	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2)	blood circulation [GO:0008015]; cellular response to ethanol [GO:0071361]; L-ascorbic acid metabolic process [GO:0019852]; L-ascorbic acid transmembrane transport [GO:0015882]; positive regulation of dendrite extension [GO:1903861]; response to oxidative stress [GO:0006979]	hit with GO BP
GN021071	Chromosome_9A	646	3	27	43.343653250774	0.890625	0.6220839813374806	27	0	0.7023705004389815	24	0	0	3	0	0.528169014084507	54	0	unmethylated (<10%)	O42115	Aristaless-related homeobox protein A (ARX-A)	intestinal type D enteroendocrine cell differentiation [GO:7770025]; intestinal type G enteroendocrine cell differentiation [GO:7770021]; intestinal type I enteroendocrine cell differentiation [GO:7770022]; intestinal type L enteroendocrine cell differentiation [GO:7770023]; intestinal type N enteroendocrine cell differentiation [GO:7770024]; neuron development [GO:0048666]; pancreatic A cell development [GO:0003322]; pancreatic A cell differentiation [GO:0003310]; regulation of neuronal action potential [GO:0098908]; regulation of transcription by RNA polymerase II [GO:0006357]; subthalamus development [GO:0021539]; telencephalon development [GO:0021537]; thalamus development [GO:0021794]	hit with GO BP
GN001885	Chromosome_9A	1000	1	25	53.9	0.34463744141163494	0.37735849056603776	18	0	0.37735849056603776	18	0	NA	NA	NA	0.39914031317163035	83	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001886	Chromosome_9A	298	1	5	54.02684563758389	0.23000926211793762	NA	0	NA	NA	NA	NA	NA	NA	NA	0.35891772501380453	92	0	NA	NA	NA	NA	no Swiss-Prot hit
GN021072	Chromosome_9A	699	2	20	38.340486409155936	0.7813547954393025	0.5194805194805194	20	0	0.6024096385542169	15	0	0.3076923076923077	5	0	0.4540295119182747	59	0	unmethylated (<10%)	Q00945	Conopressin/neurophysin [Cleaved into: Lys-conopressin G; Neurophysin]	NA	hit, no GO BP
GN021073	Chromosome_9A	13496	12	372	35.51422643746295	0.876060850355449	2.0246992102613026	372	0	0.9364358683314415	85	0	2.2746529361924006	287	0	2.121212121212121	60	0	unmethylated (<10%)	H2A0M7	Peroxidase-like protein	response to oxidative stress [GO:0006979]	hit with GO BP
GN021074	Chromosome_9A	15873	6	230	35.60763560763561	0.45824157410202515	76.01459854014598	228	0.8377192982456141	74.02234636871508	19	0.8947368421052632	76.12446087492299	209	0.8325358851674641	0.5895357406042742	38	0	methylated (>=50%)	O43736	Integral membrane protein 2A (Protein E25)	negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]	hit with GO BP
GN021069	Chromosome_9A	15256	15	233	34.261929732564234	0.5213832295401722	83.11753825458214	232	0.9827586206896551	83.2464146023468	27	0.9629629629629629	83.0984555984556	205	0.9853658536585366	67.27272727272727	49	0.5918367346938775	methylated (>=50%)	Q6GN91	5'-nucleotidase domain-containing protein 3 (EC 3.1.3.-)	NA	hit, no GO BP
GN021068	Chromosome_9A	8648	6	193	36.702127659574465	0.6647009159697331	0.9316770186335404	192	0	0.6700167504187605	53	0	1.0215827338129497	139	0	0.6778019849915274	93	0	unmethylated (<10%)	Q0P5B7	Deacylase AADAC (EC 3.-.-.-) (50 kDa microsomal esterase/N-deacetylase) (Acetylesterase AADAC) (EC 3.1.1.6) (Arylacetamide deacetylase) (Arylalkyl acylamidase AADAC) (EC 3.5.1.76) (Diacylglycerol lipase activity AADAC) (EC 3.1.1.79)	positive regulation of triglyceride catabolic process [GO:0010898]	hit with GO BP
GN021067	Chromosome_9A	12343	6	367	36.822490480434254	0.8773993046476268	1.0961123110151187	365	0	0.7939372067845543	49	0	1.1492793193218618	316	0	0.4439511653718091	41	0	unmethylated (<10%)	Q0P5B7	Deacylase AADAC (EC 3.-.-.-) (50 kDa microsomal esterase/N-deacetylase) (Acetylesterase AADAC) (EC 3.1.1.6) (Arylacetamide deacetylase) (Arylalkyl acylamidase AADAC) (EC 3.5.1.76) (Diacylglycerol lipase activity AADAC) (EC 3.1.1.79)	positive regulation of triglyceride catabolic process [GO:0010898]	hit with GO BP
GN021063	Chromosome_9A	213	1	9	46.009389671361504	0.849357554275587	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016544	Chromosome_9A	305	1	24	62.295081967213115	0.8133333333333334	4.301075268817204	9	0	4.301075268817204	9	0	NA	NA	NA	0.5040322580645161	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011432	Chromosome_9A	1023	1	30	39.49169110459433	0.7620111731843575	0.7933645870897944	30	0	0.7933645870897944	30	0	NA	NA	NA	0.9615384615384616	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021062	Chromosome_9A	682	3	21	39.442815249266864	0.8053306342780027	0.506649778340722	12	0	0.5445881552076243	10	0	0	2	0	0.4274026132616925	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021055	Chromosome_9A	27481	31	318	35.366253047560136	0.37221568424509366	81.59833938764919	315	0.9333333333333333	84.61748633879782	88	0.9545454545454546	80.89045483664317	227	0.9251101321585903	80.44019933554817	21	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021056	Chromosome_9A	11864	21	146	35.00505731625084	0.4049485650535998	89.95743818402919	145	1	90.65825778478518	44	1	89.71490928931932	101	1	86.95359784801614	26	0.9615384615384616	methylated (>=50%)	Q9HCL2	Glycerol-3-phosphate acyltransferase 1, mitochondrial (GPAT-1) (EC 2.3.1.15)	CDP-diacylglycerol biosynthetic process [GO:0016024]; diacylglycerol biosynthetic process [GO:0006651]; glycerophospholipid metabolic process [GO:0006650]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylglycerol biosynthetic process [GO:0006655]; triglyceride biosynthetic process [GO:0019432]	hit with GO BP
GN021057	Chromosome_9A	25182	21	284	34.425383210229526	0.38181984172364586	87.03870387038704	279	0.9175627240143369	91.92629815745394	58	0.9655172413793104	86.12124261099233	221	0.9049773755656109	16.069941715237302	21	0.047619047619047616	methylated (>=50%)	Q02645	Protein hu-li tai shao (Adducin-like protein)	actin filament bundle organization [GO:0061572]; adult somatic muscle development [GO:0007527]; axon guidance [GO:0007411]; centrosome cycle [GO:0007098]; cystoblast division [GO:0007282]; female germ-line cyst formation [GO:0048135]; female germline ring canal formation, actin assembly [GO:0008302]; fusome organization [GO:0045478]; germ-line cyst formation [GO:0048134]; germarium-derived oocyte fate determination [GO:0007294]; meiotic spindle organization [GO:0000212]; oogenesis [GO:0048477]; ovarian fusome organization [GO:0030723]; photoreceptor cell axon guidance [GO:0072499]; postsynapse organization [GO:0099173]; sarcomere organization [GO:0045214]; testicular fusome organization [GO:0030724]	hit with GO BP
GN021053	Chromosome_9A	6839	6	81	35.76546278695716	0.3717214459558209	93.12583967756382	77	1	95.27991218441274	14	1	92.57383966244726	63	1	92.91530944625407	15	1	methylated (>=50%)	Q6PBN5	Lipid droplet-regulating VLDL assembly factor AUP1 (Ancient ubiquitous protein 1)	ERAD pathway [GO:0036503]; lipid droplet formation [GO:0140042]; lipid droplet organization [GO:0034389]; protein localization to lipid droplet [GO:1990044]	hit with GO BP
GN021054	Chromosome_9A	3407	3	42	38.21543880246551	0.33972934472934474	91.49386373254337	42	1	92.15017064846417	22	1	91.10512129380054	20	1	76.08359133126935	26	0.8076923076923077	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021052	Chromosome_9A	668	1	21	40.5688622754491	0.7670603674540682	0.762673844773441	18	0	0.762673844773441	18	0	NA	NA	NA	0.4144144144144144	44	0	unmethylated (<10%)	Q0P5B7	Deacylase AADAC (EC 3.-.-.-) (50 kDa microsomal esterase/N-deacetylase) (Acetylesterase AADAC) (EC 3.1.1.6) (Arylacetamide deacetylase) (Arylalkyl acylamidase AADAC) (EC 3.5.1.76) (Diacylglycerol lipase activity AADAC) (EC 3.1.1.79)	positive regulation of triglyceride catabolic process [GO:0010898]	hit with GO BP
GN021048	Chromosome_9A	16715	7	475	36.88902183667365	0.8353707416832757	1.1482923463604553	467	0	0.7760532150776053	40	0	1.1846162168009953	427	0	0.5784526391901663	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021047	Chromosome_9A	2416	5	16	33.23675496688742	0.23982826866523557	0.8027522935779816	16	0	1.0071942446043165	12	0	0	4	0	0.3428011753183154	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021046	Chromosome_9A	409	2	7	37.89731051344743	0.4766899766899767	0	7	0	0	7	0	NA	NA	NA	0.6840796019900498	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021045	Chromosome_9A	2219	4	50	35.82694907616043	0.7069130296272699	0.2702702702702703	50	0	0.25125628140703515	26	0	0.2846299810246679	24	0	0.642148277875073	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013630	Chromosome_9A	379	1	23	46.70184696569921	1.1582513951634335	0.7561436672967864	23	0	0.7561436672967864	23	0	NA	NA	NA	0.6108202443280978	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021044	Chromosome_9A	3156	4	73	34.50570342205323	0.7773661301751189	0.6714517249363279	73	0	0.7843137254901961	24	0	0.6365565322825099	49	0	0.2828854314002829	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021043	Chromosome_9A	3143	4	72	34.45752465797009	0.7717618170656845	0.5754315736802602	72	0	0.6666666666666666	25	0	0.5489183080400387	47	0	0.4282655246252677	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021042	Chromosome_9A	2988	2	49	35.54216867469879	0.5195747217806042	2.0043572984749454	34	0	0.6925207756232687	6	0	2.6064844246662426	28	0	7.709447415329768	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021041	Chromosome_9A	3225	4	79	34.604651162790695	0.8183833095096607	0.3824091778202677	79	0	0.4306632213608958	28	0	0.36661026508742245	51	0	0.7640449438202247	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021038	Chromosome_9A	195	1	6	45.64102564102564	0.6	0.40160642570281124	6	0	0.40160642570281124	6	0	NA	NA	NA	0.4692999608916699	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021039	Chromosome_9A	614	3	18	35.01628664495114	0.9716898188851767	0.5133470225872689	18	0	0.390625	14	0	0.970873786407767	4	0	0.2548853016142736	46	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021040	Chromosome_9A	2210	4	45	35.52036199095023	0.6508678237650201	0.5130597014925373	45	0	0.48971596474045054	24	0	0.5342831700801425	21	0	0.8816120906801007	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002398	Chromosome_9A	1066	3	7	38.18011257035647	0.18967007269584668	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN019865	Chromosome_9A	186	1	10	46.236559139784944	1.0333333333333334	0.2942618930848455	9	0	0.2942618930848455	9	0	NA	NA	NA	0.6779100529100529	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019866	Chromosome_9A	704	2	22	40.34090909090909	0.7736263736263737	0.6012024048096193	22	0	0.5592841163310962	20	0	0.9615384615384616	2	0	0.5343197698314838	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019867	Chromosome_9A	528	1	35	63.446969696969695	0.6587295929279248	68.41269841269842	34	0.8235294117647058	68.41269841269842	34	0.8235294117647058	NA	NA	NA	77.73253993109928	97	0.9381443298969072	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019855	Chromosome_9A	568	1	42	65.84507042253522	0.6866221505871517	77.3391812865497	41	0.9512195121951219	77.3391812865497	41	0.9512195121951219	NA	NA	NA	70.92709270927092	35	0.9428571428571428	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN019868	Chromosome_9A	231	1	9	65.36796536796537	0.375	78.99159663865547	9	1	78.99159663865547	9	1	NA	NA	NA	77.6268115942029	120	0.9333333333333333	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN017802	Chromosome_9A	1638	1	15	37.301587301587304	0.26870666462521053	54.65768799102133	8	0.5	54.65768799102133	8	0.5	NA	NA	NA	69.98413957176844	17	0.8823529411764706	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020167	Chromosome_9A	1368	3	26	39.1812865497076	0.5038031700165725	36.97591436217663	26	0.2692307692307692	53.874538745387454	13	0.5384615384615384	27.361791462561232	13	0	35.49597855227882	24	0.375	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN019869	Chromosome_9A	1446	1	26	42.60027662517289	0.3963189019955093	61.190432041535324	26	0.5769230769230769	61.190432041535324	26	0.5769230769230769	NA	NA	NA	58.6074177746676	8	0.75	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN021033	Chromosome_9A	2221	4	42	35.524538496172894	0.6025268379645777	0.45558086560364464	42	0	0	21	0	0.7490636704119851	21	0	0.8682521706304266	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021034	Chromosome_9A	2190	4	46	35.38812785388128	0.6733777171733376	0.34334763948497854	46	0	0.2806361085126286	24	0	0.3965107057890563	22	0	0.5044625533566163	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021035	Chromosome_9A	1160	3	41	41.55172413793103	0.8234499714320342	0.2700877785280216	41	0	0.45662100456621	22	0	0.12135922330097088	19	0	0.401965163019205	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021036	Chromosome_9A	9600	9	71	35.625	0.23573852806606213	88.79979954898522	71	0.9859154929577465	89.76083707025411	27	1	88.31511496419148	44	0.9772727272727273	69.84924623115577	28	0.8214285714285714	methylated (>=50%)	Q8VHT6	Arsenite methyltransferase (EC 2.1.1.137) (Methylarsonite methyltransferase) (S-adenosyl-L-methionine:arsenic(III) methyltransferase)	arsonoacetate metabolic process [GO:0018872]; methylation [GO:0032259]; response to arsenic-containing substance [GO:0046685]; toxin metabolic process [GO:0009404]	hit with GO BP
GN021037	Chromosome_9A	8361	12	85	33.90742734122713	0.3536971010857491	84.09375559134013	85	0.9764705882352941	86.9090909090909	23	1	83.40387614167966	62	0.967741935483871	54.148471615720524	5	0.4	methylated (>=50%)	Q9D2V8	Solute carrier family 75 member 1 (Major facilitator superfamily domain-containing protein 10) (Tetracycline transporter-like protein)	sodium-independent organic anion transport [GO:0043252]	hit with GO BP
GN021032	Chromosome_9A	1659	2	23	38.517179023508135	0.3845773952307041	92.77638190954774	23	1	92.65279583875163	22	1	96.29629629629629	1	1	8.579335793357934	51	0.0784313725490196	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN015928	Chromosome_9A	408	1	14	45.09803921568628	0.7083333333333334	0	13	0	0	13	0	NA	NA	NA	0	4	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015927	Chromosome_9A	906	1	16	38.30022075055188	0.5026003744539214	0.37593984962406013	7	0	0.37593984962406013	7	0	NA	NA	NA	0.5309734513274337	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021031	Chromosome_9A	3488	9	56	33.68692660550459	0.5670655588264325	0.39133837725019566	56	0	0.4050632911392405	31	0	0.3767491926803014	25	0	0.6139400505597689	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021030	Chromosome_9A	37887	27	1027	36.505925515348274	0.8136238704131973	0.8656168486136605	978	0	0.7796471070988921	138	0	0.8797587975879759	840	0	0.975800156128025	48	0	unmethylated (<10%)	Q14573	Inositol 1,4,5-trisphosphate-gated calcium channel ITPR3 (IP3 receptor isoform 3) (IP3R-3) (InsP3R3) (Type 3 inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor)	calcium ion homeostasis [GO:0055074]; G protein-coupled receptor signaling pathway [GO:0007186]; platelet activation [GO:0030168]; positive regulation of cytosolic calcium ion concentration [GO:0007204]; protein homotetramerization [GO:0051289]; release of sequestered calcium ion into cytosol [GO:0051209]; response to calcium ion [GO:0051592]; sensory perception of taste [GO:0050909]	hit with GO BP
GN017555	Chromosome_9A	168	1	2	45.23809523809524	0.24086021505376345	0	1	0	0	1	0	NA	NA	NA	7.1733561058924	49	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020097	Chromosome_9A	1172	7	29	38.39590443686007	0.671845658147028	0.36764705882352944	29	0	0.40160642570281124	21	0	0.31446540880503143	8	0	1.5086206896551724	20	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021029	Chromosome_9A	11279	4	175	36.56352513520702	0.4658320594977394	89.18106686701728	175	0.96	96.59815733522325	54	1	86.89527137708856	121	0.9421487603305785	12.541849085758434	63	0.09523809523809523	methylated (>=50%)	Q7T308	E3 ubiquitin-protein ligase rnf168 (EC 2.3.2.27) (RING finger protein 168) (RING-type E3 ubiquitin transferase rnf168)	DNA damage response [GO:0006974]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; isotype switching [GO:0045190]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of DNA repair [GO:0045739]; protein K63-linked ubiquitination [GO:0070534]; protein ubiquitination [GO:0016567]; response to ionizing radiation [GO:0010212]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN011842	Chromosome_9A	1677	1	41	41.97972570065593	0.5549932196822936	2.6548672566371683	6	0	2.6548672566371683	6	0	NA	NA	NA	1.934398654331371	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021025	Chromosome_9A	6945	7	189	36.19870410367171	0.831802938358352	0.5635873560401863	149	0	0.546448087431694	27	0	0.5673335323977307	122	0	0.5884389061959155	45	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN021024	Chromosome_9A	2084	2	49	35.892514395393476	0.7300518319928507	0.25176233635448136	49	0	0.5263157894736842	15	0	0.14124293785310735	34	0	0.7020280811232449	55	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN021028	Chromosome_9A	2020	2	44	35.34653465346535	0.6973824618668005	0.37174721189591076	32	0	0.6711409395973155	5	0	0.31545741324921134	27	0	0.660338423442014	67	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN021027	Chromosome_9A	2046	2	48	35.58162267839687	0.7420212765957447	0.3827227993439038	39	0	0.26737967914438504	10	0	0.41237113402061853	29	0	0.2664298401420959	50	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN021026	Chromosome_9A	4268	4	87	32.75538894095595	0.7605194166803212	0.5730092867022327	87	0	0.5109489051094891	31	0	0.5960444324031428	56	0	0.5514705882352942	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020003	Chromosome_9A	551	1	37	66.60617059891108	0.609258263104417	0.5847953216374269	9	0	0.5847953216374269	9	0	NA	NA	NA	0.5877413937867338	80	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002543	Chromosome_9A	1107	1	34	42.637759710930446	0.7145867745058951	1.697792869269949	34	0	1.697792869269949	34	0	NA	NA	NA	0.9049773755656109	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001760	Chromosome_9A	3102	4	70	38.652482269503544	0.6042946834090301	15.492957746478874	5	0	NA	NA	NA	15.492957746478874	5	0	3.554626241505489	57	0	sparse (10-50%)	Q17QR8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN012652	Chromosome_9A	3853	7	43	30.36594861147158	0.48962264429740443	14.743589743589743	5	0	NA	NA	NA	14.743589743589743	5	0	3.2665181885671863	59	0	sparse (10-50%)	Q5ZI27	Nuclear apoptosis-inducing factor 1	homologous chromosome pairing at meiosis [GO:0007129]; meiotic DNA double-strand break processing involved in reciprocal meiotic recombination [GO:0010705]; oogenesis [GO:0048477]; regulation of mitochondrial membrane permeability involved in apoptotic process [GO:1902108]; spermatogenesis [GO:0007283]	hit with GO BP
GN017465	Chromosome_9A	235	1	19	58.723404255319146	0.9427787162162162	0.37593984962406013	16	0	0.37593984962406013	16	0	NA	NA	NA	0.8654886404615939	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001973	Chromosome_9A	516	1	32	58.333333333333336	0.9339366515837104	5.76725025746653	32	0	5.76725025746653	32	0	NA	NA	NA	0.28653295128939826	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021020	Chromosome_9A	1723	4	36	36.56413232733604	0.6269507560443115	0.9267431597528685	36	0	0.31725888324873097	22	0	2.318840579710145	14	0	59.88811188811189	51	0.5686274509803921	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021021	Chromosome_9A	2478	2	78	42.21146085552865	0.7083814361579311	96.08004385964912	78	1	96.83754993342211	72	1	92.54658385093168	6	1	87.39054290718039	21	0.9047619047619048	methylated (>=50%)	Q6XDT6	Ikaros family zinc finger protein (Ikaros-like transcription factor) (HIL)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN021022	Chromosome_9A	1774	2	37	36.58399098083427	0.6234612462006079	0.5612722170252572	37	0	0.5285412262156448	19	0	0.587248322147651	18	0	0.6543075245365322	49	0	unmethylated (<10%)	O94993	Transcription factor SOX-30	negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of Wnt signaling pathway [GO:0030178]; positive regulation of transcription by RNA polymerase II [GO:0045944]; proacrosomal vesicle fusion [GO:0120211]; regulation of transcription by RNA polymerase II [GO:0006357]; response to corticosteroid [GO:0031960]; spermatid development [GO:0007286]	hit with GO BP
GN021023	Chromosome_9A	25133	8	447	36.02037162296582	0.5498760210035006	78.65471991866043	443	0.90744920993228	76.10693400167085	21	0.8095238095238095	78.75544986127626	422	0.9123222748815166	42.92890262751159	57	0.43859649122807015	methylated (>=50%)	P13051	Uracil-DNA glycosylase (UDG) (EC 3.2.2.27)	base-excision repair [GO:0006284]; base-excision repair, AP site formation via deaminated base removal [GO:0097510]; depyrimidination [GO:0045008]; negative regulation of apoptotic process [GO:0043066]; single strand break repair [GO:0000012]	hit with GO BP
GN021012	Chromosome_9A	4139	3	103	39.42981396472578	0.6722419154424982	2.3019271948608138	102	0	1.4242115971515767	30	0	2.615328732292045	72	0	0.31623330990864373	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021014	Chromosome_9A	23569	17	389	35.287878145021004	0.5307033583914637	94.35701012552619	388	1	95.48291233283804	56	1	94.1923143801078	332	1	17.51824817518248	39	0.1794871794871795	methylated (>=50%)	Q8C156	Condensin complex subunit 2 (Barren homolog protein 1) (Chromosome-associated protein H) (mCAP-H) (Non-SMC condensin I complex subunit H) (XCAP-H homolog)	B cell differentiation [GO:0030183]; cell development [GO:0048468]; female meiosis chromosome separation [GO:0051309]; female meiotic nuclear division [GO:0007143]; immunoglobulin heavy chain V-D-J recombination [GO:0071707]; meiotic chromosome condensation [GO:0010032]; meiotic chromosome segregation [GO:0045132]; mitotic chromosome condensation [GO:0007076]; positive regulation of chromosome condensation [GO:1905821]; positive regulation of chromosome segregation [GO:0051984]; positive regulation of chromosome separation [GO:1905820]	hit with GO BP
GN021015	Chromosome_9A	12757	3	149	35.8861801363957	0.366846475111166	43.389787664307384	146	0.3150684931506849	72.72727272727273	34	0.6470588235294118	33.742022169969765	112	0.21428571428571427	64.18786692759295	23	0.6521739130434783	sparse (10-50%)	Q5U4W1	Leucine zipper putative tumor suppressor 2 homolog (Protein lapser1)	microtubule severing [GO:0051013]; mitotic cytokinesis [GO:0000281]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; nuclear export [GO:0051168]; spindle midzone assembly [GO:0051255]	hit with GO BP
GN021016	Chromosome_9A	23182	19	364	36.916573203347426	0.46341804312736584	80.6762168823167	358	0.9441340782122905	96.404821280133	92	1	77.0986954055587	266	0.924812030075188	92.26890756302521	12	1	methylated (>=50%)	G5E870	E3 ubiquitin-protein ligase TRIP12 (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase TRIP12) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)	DNA damage response [GO:0006974]; DNA repair-dependent chromatin remodeling [GO:0140861]; heterochromatin boundary formation [GO:0033696]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of embryonic development [GO:0045995]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN021017	Chromosome_9A	15386	9	145	36.07825295723385	0.2909792607644862	94.95391705069125	144	0.9930555555555556	95.96122778675283	27	1	94.78634775597958	117	0.9914529914529915	95.02026635784597	26	1	methylated (>=50%)	Q14669	E3 ubiquitin-protein ligase TRIP12 (EC 2.3.2.26) (E3 ubiquitin-protein ligase for Arf) (ULF) (HECT-type E3 ubiquitin transferase TRIP12) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)	DNA damage response [GO:0006974]; DNA repair-dependent chromatin remodeling [GO:0140861]; heterochromatin boundary formation [GO:0033696]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; regulation of embryonic development [GO:0045995]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN021018	Chromosome_9A	43026	21	592	34.565146655510624	0.4616295025990115	83.049186247453	577	0.9185441941074524	89.02181562280084	55	0.9636363636363636	82.57674858749199	522	0.9137931034482759	0.6794751640112465	62	0	methylated (>=50%)	P00491	Purine nucleoside phosphorylase (PNP) (EC 2.4.2.1) (Inosine phosphorylase) (Inosine-guanosine phosphorylase)	allantoin metabolic process [GO:0000255]; dAMP catabolic process [GO:0046059]; deoxyadenosine catabolic process [GO:0006157]; deoxyguanosine catabolic process [GO:0006161]; deoxyinosine catabolic process [GO:0006149]; guanosine catabolic process [GO:0046115]; immune response [GO:0006955]; IMP catabolic process [GO:0006204]; inosine catabolic process [GO:0006148]; NAD+ biosynthetic process via the salvage pathway [GO:0034355]; nicotinamide riboside catabolic process [GO:0006738]; nucleobase-containing compound metabolic process [GO:0006139]; nucleotide biosynthetic process [GO:0009165]; positive regulation of alpha-beta T cell differentiation [GO:0046638]; positive regulation of interleukin-2 production [GO:0032743]; positive regulation of T cell proliferation [GO:0042102]; purine-containing compound salvage [GO:0043101]; response to xenobiotic stimulus [GO:0009410]; urate biosynthetic process [GO:0034418]	hit with GO BP
GN021085	Chromosome_9A	574	2	19	45.47038327526133	0.6454018227009114	1.1513157894736843	12	0	1.308411214953271	11	0	0	1	0	3.8146021328958164	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021019	Chromosome_9A	3179	2	97	37.27587291601132	0.8843116224648986	1.3238289205702647	97	0	0.2386634844868735	45	0	2.1314387211367674	52	0	0.6382493731479371	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017409	Chromosome_9A	762	1	11	39.37007874015748	0.37927601809954753	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN021011	Chromosome_9A	5885	5	148	36.19371282922685	0.769281045751634	0.5922270203578038	148	0	0.4870738104158861	55	0	0.6438557763061075	93	0	0.846262341325811	54	0	unmethylated (<10%)	Q8R0M8	Probable monocarboxylate transporter 5 (MCT 5)	carboxylic acid transmembrane transport [GO:1905039]	hit with GO BP
GN021010	Chromosome_9A	1284	3	54	36.60436137071651	1.2556092790786113	0.5734310289901242	54	0	0.6622516556291391	16	0	0.5453020134228188	38	0	0.5521273140630075	62	0	unmethylated (<10%)	P40338	von Hippel-Lindau disease tumor suppressor (pVHL)	amyloid fibril formation [GO:1990000]; angiogenesis [GO:0001525]; blood vessel endothelial cell migration [GO:0043534]; camera-type eye morphogenesis [GO:0048593]; ciliary body morphogenesis [GO:0061073]; extracellular matrix organization [GO:0030198]; eye pigmentation [GO:0048069]; homeostasis of number of retina cells [GO:0048877]; iris morphogenesis [GO:0061072]; melanin metabolic process [GO:0006582]; negative regulation of autophagy [GO:0010507]; negative regulation of cell population proliferation [GO:0008285]; negative regulation of endothelial cell differentiation [GO:0045602]; negative regulation of gene expression [GO:0010629]; negative regulation of hypoxia-inducible factor-1alpha signaling pathway [GO:1902072]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of signal transduction [GO:0009968]; negative regulation of thymocyte apoptotic process [GO:0070244]; negative regulation of TORC1 signaling [GO:1904262]; negative regulation of transcription by RNA polymerase II [GO:0000122]; negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; neuron differentiation [GO:0030182]; pancreatic A cell differentiation [GO:0003310]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of epithelial cell proliferation [GO:0050679]; proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein catabolic process [GO:0030163]; protein transport [GO:0015031]; protein ubiquitination [GO:0016567]; regulation of apoptotic signaling pathway [GO:2001233]; regulation of catecholamine metabolic process [GO:0042069]; regulation of cellular response to hypoxia [GO:1900037]; regulation of DNA-templated transcription [GO:0006355]; regulation of gene expression [GO:0010468]; regulation of postsynapse organization [GO:0099175]; regulation of protein localization [GO:0032880]; regulation of thymocyte apoptotic process [GO:0070243]; regulation protein catabolic process at postsynapse [GO:0140252]; response to ethanol [GO:0045471]; response to hypoxia [GO:0001666]; type B pancreatic cell differentiation [GO:0003309]	hit with GO BP
GN021009	Chromosome_9A	4506	4	101	35.50821127385708	0.7115934573667168	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	Q503M4	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN021008	Chromosome_9A	1793	2	47	37.98103736754044	0.7279928817014807	0.4287245444801715	47	0	0.2994011976047904	43	0	1.530612244897959	4	0	0	3	0	unmethylated (<10%)	Q6P2X9	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN017553	Chromosome_9A	168	1	2	45.23809523809524	0.24086021505376345	12.307692307692308	2	0	12.307692307692308	2	0	NA	NA	NA	1.9676739283204498	40	0	NA	NA	NA	NA	no Swiss-Prot hit
GN001639	Chromosome_9A	327	1	17	47.09480122324159	0.937753036437247	1.3856812933025404	17	0	1.3856812933025404	17	0	NA	NA	NA	0.8695652173913043	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021003	Chromosome_9A	35863	54	596	37.72690516688509	0.4730771284876171	79.41434757593193	596	0.9295302013422819	82.03883495145631	325	0.963076923076923	77.16406997018954	271	0.8892988929889298	83.14754098360656	34	0.9411764705882353	methylated (>=50%)	Q8N2E2	von Willebrand factor D and EGF domain-containing protein	NA	hit, no GO BP
GN021004	Chromosome_9A	720	2	24	41.111111111111114	0.7897984368572604	0.3883495145631068	24	0	0.3883495145631068	24	0	NA	NA	NA	0.5767844268204758	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021005	Chromosome_9A	795	2	26	41.76100628930818	0.7501360914534567	0.7960199004975125	26	0	0.7299270072992701	25	0	2.1739130434782608	1	0	0.5128205128205128	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN021006	Chromosome_9A	6420	3	210	36.137071651090345	1.0213636363636365	1.36	200	0	0.6349206349206349	33	0	1.4819759679572764	167	0	0.8	68	0	unmethylated (<10%)	Q3T001	17-beta-hydroxysteroid dehydrogenase type 6 (17-beta-HSD 6) (17-beta-HSD6) (EC 1.1.1.105) (EC 1.1.1.209) (EC 1.1.1.239) (EC 1.1.1.53) (EC 1.1.1.62) (3-alpha->beta-hydroxysteroid epimerase) (3-alpha->beta-HSE) (Oxidative 3-alpha hydroxysteroid dehydrogenase)	brexanolone catabolic process [GO:0062175]; retinol metabolic process [GO:0042572]	hit with GO BP
GN021007	Chromosome_9A	50046	3	608	35.47336450465572	0.3876275692614938	59.33539506397429	603	0.6003316749585407	38.45682792406613	34	0.5	60.42297999936202	569	0.6063268892794376	3.7447988904299585	57	0	methylated (>=50%)	Q27I66	TSC22 domain family protein 1 (Transforming growth factor beta-1-induced transcript 4 protein)	negative regulation of apoptotic process [GO:0043066]; negative regulation of hematopoietic stem cell proliferation [GO:1902034]; positive regulation of apoptotic process [GO:0043065]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of programmed cell death [GO:0043068]; positive regulation of transforming growth factor beta receptor signaling pathway [GO:0030511]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN020999	Chromosome_9A	19971	8	293	34.37484352310851	0.49806875566886477	81.640700756351407	274	0.9087591240875912	44.787803873094354	42	0.5238095238095238	88.49869651893881	232	0.978448275862069	0.5638340716874748	57	0	methylated (>=50%)	Q32LB9	Nitric oxide-associated protein 1	mitochondrial ribosome assembly [GO:0061668]; mitochondrion organization [GO:0007005]	hit with GO BP
GN021000	Chromosome_9A	20541	15	468	36.39063336741152	0.6886156924804036	0.7911920308850865	438	0	0.6248698187877526	111	0	0.8405438813349815	327	0	0.6031363088057901	58	0	unmethylated (<10%)	A0A6I8TI61	Ionotropic receptor coreceptor Ir25a (Ionotropic receptor 25a)	detection of chemical stimulus involved in sensory perception of smell [GO:0050911]; sensory perception of smell [GO:0007608]; signal transduction [GO:0007165]	hit with GO BP
GN021001	Chromosome_9A	37190	15	683	37.55848346329658	0.5381665011254543	72.30687590023501	530	0.8	84.82682792743266	41	0.9512195121951219	71.37971746122216	489	0.787321063394683	46.98318496538081	17	0.35294117647058826	methylated (>=50%)	Q8BG19	Protein O-mannosyl-transferase TMTC4 (EC 2.4.1.109) (Transmembrane O-mannosyltransferase targeting cadherins 4) (Transmembrane and tetratricopeptide repeat-containing 4)	endoplasmic reticulum unfolded protein response [GO:0030968]; outer hair cell apoptotic process [GO:1905584]; positive regulation of endoplasmic reticulum calcium ion concentration [GO:0032470]; protein O-linked glycosylation via mannose [GO:0035269]; sensory perception of sound [GO:0007605]	hit with GO BP
GN021002	Chromosome_9A	11631	5	276	33.59126472358353	0.8429695033181449	4.010410505146102	274	0	2.447089947089947	29	0	4.1639599844095105	245	0	1.7313241423533183	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001626	Chromosome_9A	807	1	18	39.77695167286245	0.5654780442229835	77.22772277227723	16	0.9375	77.22772277227723	16	0.9375	NA	NA	NA	77.86407766990291	18	0.8888888888888888	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001627	Chromosome_9A	2460	6	40	33.3739837398374	0.5925569071419968	59.41711062362896	40	0.9	53.33648840511122	26	0.8461538461538461	71.33580705009277	14	1	79.73206568712186	29	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020997	Chromosome_9A	2709	3	35	35.03137689184201	0.42215424892474557	74.30604982206405	31	0.967741935483871	70.66666666666667	4	1	74.51127819548873	27	0.9629629629629629	52.06692913385827	17	0.5882352941176471	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020998	Chromosome_9A	1002	1	63	50.0998003992016	1.002	0.847457627118644	63	0	0.847457627118644	63	0	NA	NA	NA	0.6896551724137931	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002028	Chromosome_9A	1050	1	24	40.666666666666664	0.5602240896358543	0.4048582995951417	16	0	0.4048582995951417	16	0	NA	NA	NA	1.7706576728499157	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020996	Chromosome_9A	1137	1	51	42.919964819700965	0.9739984882842025	1.2127894156560088	49	0	1.2127894156560088	49	0	NA	NA	NA	0.33852403520649965	64	0	unmethylated (<10%)	Q13639	5-hydroxytryptamine receptor 4 (5-HT-4) (5-HT4) (Serotonin receptor 4)	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; adenylate cyclase-activating serotonin receptor signaling pathway [GO:0007192]; adenylate cyclase-inhibiting serotonin receptor signaling pathway [GO:0007198]; chemical synaptic transmission [GO:0007268]; G protein-coupled receptor signaling pathway [GO:0007186]; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger [GO:0007187]; large intestinal transit [GO:0120056]; maintenance of gastrointestinal epithelium [GO:0030277]; mucus secretion [GO:0070254]; regulation of appetite [GO:0032098]; regulation of postsynapse assembly [GO:0150052]	hit with GO BP
GN020987	Chromosome_9A	1261	2	18	34.09992069785884	0.4918949375866852	1.8078020932445291	18	0	0	1	0	1.873767258382643	17	0	0.37894736842105264	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020988	Chromosome_9A	15795	7	454	37.34093067426401	0.8249801978660288	1.183572582945147	447	0	0.502092050209205	25	0	1.224613213727763	422	0	0.5104408352668214	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020989	Chromosome_9A	11606	15	361	34.62864035843529	1.0487435150739643	1.00728675525075	331	0	0.8274785323965652	152	0	1.1012317481034342	179	0	1.3909774436090225	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020990	Chromosome_9A	15105	7	336	38.66931479642503	0.6009854433370081	43.59377836954548	328	0.5152439024390244	34.76070528967254	55	0.38181818181818183	44.799834915394136	273	0.5421245421245421	0.8869179600886918	62	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020991	Chromosome_9A	495	1	25	42.02020202020202	1.1652542372881356	95.08726567550097	25	1	95.08726567550097	25	1	NA	NA	NA	82.41042345276873	34	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020992	Chromosome_9A	4863	6	76	35.90376310919186	0.4894732032531954	87.01385784532856	74	0.972972972972973	79.86030267753202	20	0.9	88.71369294605809	54	1	46.24007473143391	47	0.48936170212765956	methylated (>=50%)	Q7M753	Pantothenate kinase 2, mitochondrial (hPanK2) (EC 2.7.1.33) (Pantothenic acid kinase 2)	aerobic respiration [GO:0009060]; angiogenesis [GO:0001525]; coenzyme A biosynthetic process [GO:0015937]; mitochondrion organization [GO:0007005]; pantothenate metabolic process [GO:0015939]; regulation of fatty acid metabolic process [GO:0019217]; regulation of mitochondrial membrane potential [GO:0051881]; regulation of triglyceride metabolic process [GO:0090207]; spermatid development [GO:0007286]	hit with GO BP
GN020986	Chromosome_9A	14373	8	173	35.3649203367425	0.3909059038444004	79.03275176002448	167	0.8263473053892215	90.10554089709763	31	0.9354838709677419	77.00663850331925	136	0.8014705882352942	3.1226765799256504	72	0	methylated (>=50%)	P81134	Renin receptor (ATPase H(+)-transporting lysosomal accessory protein 2) (ATPase H(+)-transporting lysosomal-interacting protein 2) (Renin/prorenin receptor) (Vacuolar ATP synthase membrane sector-associated protein M8-9) (V-ATPase M8.9 subunit) [Cleaved into: Renin receptor extracellular fragment; Renin receptor cytoplasmic fragment]	lysosomal lumen acidification [GO:0007042]; pH reduction [GO:0045851]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of Wnt signaling pathway [GO:0030177]; proton transmembrane transport [GO:1902600]	hit with GO BP
GN020985	Chromosome_9A	8708	5	111	33.80799265043638	0.4478427665962415	87.15034965034965	111	0.990990990990991	95.94202898550725	9	1	86.80594981264903	102	0.9901960784313726	90.80694586312563	26	0.9230769230769231	methylated (>=50%)	Q9VMW8	Mannose-P-dolichol utilization defect 1 protein homolog	oligosaccharide biosynthetic process [GO:0009312]	hit with GO BP
GN020984	Chromosome_9A	27005	16	386	35.48602110720237	0.45612617802027655	86.66896182388494	379	0.9393139841688655	92.29588704726827	76	0.9736842105263158	85.86785527005769	303	0.9306930693069307	64.68085106382979	20	0.55	methylated (>=50%)	Q9Y6E0	Serine/threonine-protein kinase 24 (EC 2.7.11.1) (Mammalian STE20-like protein kinase 3) (MST-3) (STE20-like kinase MST3) [Cleaved into: Serine/threonine-protein kinase 24 36 kDa subunit (Mammalian STE20-like protein kinase 3 N-terminal) (MST3/N); Serine/threonine-protein kinase 24 12 kDa subunit (Mammalian STE20-like protein kinase 3 C-terminal) (MST3/C)]	cellular response to oxidative stress [GO:0034599]; cellular response to starvation [GO:0009267]; execution phase of apoptosis [GO:0097194]; intracellular signal transduction [GO:0035556]; intrinsic apoptotic signaling pathway in response to oxidative stress [GO:0008631]; negative regulation of cell migration [GO:0030336]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of axon regeneration [GO:0048679]; signal transduction [GO:0007165]	hit with GO BP
GN020983	Chromosome_9A	26758	5	510	35.75379325809104	0.5963929505730741	87.390537845727	485	0.9484536082474226	66.13691931540342	19	0.6842105263157895	87.90515939969808	466	0.9592274678111588	1.2189995796553175	48	0	methylated (>=50%)	Q3B752	Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)	central nervous system neuron development [GO:0021954]; DNA repair [GO:0006281]; dTDP biosynthetic process [GO:0006233]; dTTP biosynthetic process [GO:0006235]; dUDP biosynthetic process [GO:0006227]	hit with GO BP
GN020981	Chromosome_9A	21769	23	599	37.410997289723916	0.7864206282520679	1.7750810281148715	593	0	0.724525975026977	186	0	2.1150296802514092	407	0	0.5434782608695652	19	0	unmethylated (<10%)	A2VEC9	SCO-spondin (SCO-spondin pseudogene)	NA	hit, no GO BP
GN020980	Chromosome_9A	1615	2	71	43.962848297213625	0.9098880345339269	0.40160642570281124	71	0	0.38071065989847713	64	0	0.4807692307692308	7	0	0.7160909856781803	49	0	unmethylated (<10%)	Q58PK4	Peptidylaminoacyl-L/D-isomerase (EC 5.1.1.21) (Frog skin isomerase)	NA	hit, no GO BP
GN020979	Chromosome_9A	21970	10	635	37.16431497496586	0.8370605491367283	1.1999734077915172	634	0	0.8016627078384798	69	0	1.2501871537655338	565	0	0.3282602208296031	69	0	unmethylated (<10%)	Q9R141	Solute carrier family 22 member 4 (Organic cation/carnitine transporter 1) (Octn1)	acetylcholine uptake [GO:0051630]; amino acid import across plasma membrane [GO:0089718]; carnitine metabolic process [GO:0009437]; carnitine transport [GO:0015879]; lactation [GO:0007595]; liver regeneration [GO:0097421]; quaternary ammonium group transport [GO:0015697]; response to exogenous dsRNA [GO:0043330]; response to lipopolysaccharide [GO:0032496]; response to vitamin D [GO:0033280]; sodium-independent organic anion transport [GO:0043252]; sulfur amino acid transport [GO:0000101]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN020581	Chromosome_9A	657	1	24	49.77168949771689	0.590783064818284	7.157894736842105	20	0	7.157894736842105	20	0	NA	NA	NA	4.042179261862917	16	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020969	Chromosome_9A	348	1	17	43.39080459770115	1.0625	0.6779661016949152	17	0	0.6779661016949152	17	0	NA	NA	NA	1.3468013468013469	26	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020970	Chromosome_9A	10102	8	150	37.655909720847355	0.419092682182103	89.1672583426311	150	0.9733333333333334	88.51921274601688	42	0.9761904761904762	89.3462783171521	108	0.9722222222222222	48.223072717331874	28	0.39285714285714285	methylated (>=50%)	B8A4F0	Palmitoyltransferase ZDHHC16A (EC 2.3.1.225) (Zinc finger DHHC domain-containing protein 16A) (DHHC-16A)	commitment of multipotent stem cells to neuronal lineage in forebrain [GO:0021898]; DNA damage response [GO:0006974]; eye development [GO:0001654]; fibroblast growth factor receptor signaling pathway [GO:0008543]; heart development [GO:0007507]; protein palmitoylation [GO:0018345]; telencephalon development [GO:0021537]	hit with GO BP
GN020971	Chromosome_9A	7204	8	218	36.923931149361465	0.8878561946952686	0.6400487656202377	218	0	0.7426661715558857	72	0	0.6013986013986014	146	0	0.5549389567147613	53	0	unmethylated (<10%)	Q9H015	Solute carrier family 22 member 4 (Ergothioneine transporter) (ET transporter) (ETTh) (Organic cation/carnitine transporter 1) (OCTN1)	acetylcholine uptake [GO:0051630]; amine transport [GO:0015837]; amino acid import across plasma membrane [GO:0089718]; carnitine transport [GO:0015879]; lactation [GO:0007595]; liver regeneration [GO:0097421]; quaternary ammonium group transport [GO:0015697]; response to exogenous dsRNA [GO:0043330]; response to lipopolysaccharide [GO:0032496]; response to vitamin D [GO:0033280]; sodium-independent organic anion transport [GO:0043252]; sulfur amino acid transport [GO:0000101]; xenobiotic transport [GO:0042908]	hit with GO BP
GN020972	Chromosome_9A	1170	1	65	43.675213675213676	1.1673420519432676	0.8243500317057705	65	0	0.8243500317057705	65	0	NA	NA	NA	0.6167763157894737	68	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020973	Chromosome_9A	18331	10	168	33.90431509464841	0.31903461924794385	77.2040404040404	168	0.8928571428571429	46.666666666666664	15	0.4666666666666667	78.96581196581197	153	0.934640522875817	1.1005692599620494	56	0	methylated (>=50%)	O88545	COP9 signalosome complex subunit 6 (SGN6) (Signalosome subunit 6) (JAB1-containing signalosome subunit 6)	protein deneddylation [GO:0000338]	hit with GO BP
GN020974	Chromosome_9A	5192	6	93	35.45839753466872	0.5702341137123745	75.45679012345678	93	0.8494623655913979	78.11094452773614	17	0.8823529411764706	75.12943786982248	76	0.8421052631578947	0.8130081300813008	34	0	methylated (>=50%)	Q17QQ4	Transcription initiation factor TFIID subunit 9	box C/D snoRNP assembly [GO:0000492]; mRNA transcription by RNA polymerase II [GO:0042789]; negative regulation of apoptotic process [GO:0043066]; negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; protein stabilization [GO:0050821]; response to interleukin-1 [GO:0070555]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN020975	Chromosome_9A	11850	5	365	39.41772151898734	0.792976377086599	2.854563133768579	352	0	2.4659863945578233	31	0	2.8891241869611255	321	0	2.2110162916989915	66	0	unmethylated (<10%)	B3EWZ3	Coadhesin	NA	hit, no GO BP
GN020976	Chromosome_9A	8684	9	104	37.586365730078306	0.3522097933896706	91.07413010590015	104	0.9423076923076923	87.63197586726999	30	0.8333333333333334	92.06143197058188	74	0.9864864864864865	0.6538461538461539	58	0	methylated (>=50%)	Q9DB52	P2R1A-PPP2R2A-interacting phosphatase regulator 1 (PABIR family member 1)	mitotic G2/M transition checkpoint [GO:0044818]; positive regulation of cell growth [GO:0030307]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]	hit with GO BP
GN020977	Chromosome_9A	1483	2	43	41.67228590694538	0.6680460107274556	54.60992907801418	43	0.6046511627906976	84.08896492728827	28	0.9285714285714286	2.710843373493976	15	0	40.78310602727673	54	0.2777777777777778	methylated (>=50%)	Q8K2J9	BTB/POZ domain-containing protein 6	neurogenesis [GO:0022008]	hit with GO BP
GN020978	Chromosome_9A	3657	2	137	42.98605414273995	0.818820103061613	0.7425742574257426	134	0	0.924415443175639	96	0	0.5906406179009541	38	0	0.5242463958060288	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020964	Chromosome_9A	10035	6	271	37.01046337817638	0.7899341587191115	2.1043706158945503	270	0	1.452643811737362	52	0	2.204052612868823	218	0	7.170256712894659	57	0	unmethylated (<10%)	Q8CHI9	Carbohydrate sulfotransferase 15 (EC 2.8.2.33) (N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase) (GalNAc4S-6ST)	hexose biosynthetic process [GO:0019319]	hit with GO BP
GN020965	Chromosome_9A	19203	13	260	33.79680258292975	0.4741474276962162	73.40349540454308	259	0.833976833976834	86.5569823434992	42	0.8571428571428571	71.63235532501216	217	0.8294930875576036	1.1433597185576077	22	0	methylated (>=50%)	Q8BG30	Negative elongation factor A (NELF-A) (Wolf-Hirschhorn syndrome candidate 2 homolog) (mWHSC2)	negative regulation of transcription elongation by RNA polymerase II [GO:0034244]; positive regulation of protein modification process [GO:0031401]; positive regulation of transcription by RNA polymerase II [GO:0045944]; transcription pausing by RNA polymerase II [GO:0160239]	hit with GO BP
GN020966	Chromosome_9A	5160	3	66	36.45348837209303	0.39080591671161197	71.74027339642481	66	0.7727272727272727	49.049429657794676	11	0.5454545454545454	75.38133007931665	55	0.8181818181818182	79.27800389311626	61	0.7868852459016393	methylated (>=50%)	Q503Y7	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC 5.2.1.8) (Parvulin-14) (Par14) (Peptidyl-prolyl cis-trans isomerase Pin4) (PPIase Pin4) (Rotamase Pin4)	rRNA processing [GO:0006364]	hit with GO BP
GN018709	Chromosome_9A	4153	13	45	33.806886588008666	0.3793579424929207	26.666666666666668	21	0.047619047619047616	33.75262054507338	12	0.08333333333333333	19.205298013245034	9	0	1.7167381974248928	23	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020967	Chromosome_9A	26793	6	695	35.74814317172396	0.8122065635549972	1.6236772486772486	679	0	0.26714158504007124	59	0	1.7325141101664643	620	0	1.3603473227206946	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020968	Chromosome_9A	11248	8	113	35.25071123755334	0.3235685860803474	72.04639602319801	112	0.8392857142857143	81.8739054290718	23	0.9130434782608695	69.75270795013284	89	0.8202247191011236	58.51289833080425	55	0.5818181818181818	methylated (>=50%)	Q6NSW5	Putative DENN domain-containing protein 10 B (DENND10 pseudogene 1) (Putative protein FAM45B)	protein transport [GO:0015031]; regulation of early endosome to late endosome transport [GO:2000641]	hit with GO BP
GN020963	Chromosome_9A	12679	12	173	35.02642164208534	0.44925631446571795	81.12205633369247	170	0.9058823529411765	88.1463243053113	49	0.9795918367346939	79.15476307752931	121	0.8760330578512396	2.8085106382978724	65	0	methylated (>=50%)	Q5ZK33	Mitochondrial proton/calcium exchanger protein (Electroneutral mitochondrial K(+)/H(+)exchanger) (KHE) (Leucine zipper-EF-hand-containing transmembrane protein 1)	calcium export from the mitochondrion [GO:0099093]; calcium ion transport [GO:0006816]; inner mitochondrial membrane organization [GO:0007007]; mitochondrial calcium ion homeostasis [GO:0051560]; mitochondrial calcium ion transmembrane transport [GO:0006851]; mitochondrion organization [GO:0007005]; protein hexamerization [GO:0034214]; protein homooligomerization [GO:0051260]	hit with GO BP
GN020962	Chromosome_9A	9539	11	49	39.207464094768845	0.14069423173245488	67.94871794871794	46	0.782608695652174	84.7165991902834	17	0.9411764705882353	59.22023182297155	29	0.6896551724137931	71.52698048220437	30	0.8333333333333334	methylated (>=50%)	Q5HZP1	Ribonuclease H2 subunit B (RNase H2 subunit B) (Ribonuclease HI subunit B)	RNA catabolic process [GO:0006401]	hit with GO BP
GN002177	Chromosome_9A	969	3	25	41.89886480908153	0.5892870174414362	39.11290322580645	10	0.1	41.55251141552512	9	0.1111111111111111	20.689655172413794	1	0	40.13559322033898	39	0.20512820512820512	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020961	Chromosome_9A	8551	7	90	38.896035551397496	0.2952729622217584	83.24768756423433	76	0.9342105263157895	89.66202783300199	20	0.95	81.01178101178101	56	0.9285714285714286	85.67474048442907	50	0.78	methylated (>=50%)	P78345	Ribonuclease P protein subunit p38 (RNaseP protein p38)	RNA processing [GO:0006396]; tRNA 5'-leader removal [GO:0001682]	hit with GO BP
GN020959	Chromosome_9A	660	1	0	42.121212121212125	0	NA	0	NA	NA	NA	NA	NA	NA	NA	75.30864197530865	13	0.9230769230769231	NA	NA	NA	NA	no Swiss-Prot hit
GN020958	Chromosome_9A	11374	10	146	36.715315632143486	0.3860810289269456	80.87820598898885	145	0.9379310344827586	84.16666666666667	53	0.9056603773584906	79.53470777378476	92	0.9565217391304348	47.37620103473762	21	0.47619047619047616	methylated (>=50%)	Q86UB2	Basic immunoglobulin-like variable motif-containing protein	NA	hit, no GO BP
GN020957	Chromosome_9A	22039	12	488	35.53700258632424	0.7018701864443591	84.0293914463355	462	0.9761904761904762	93.12948282370706	51	1	83.20375381032298	411	0.9732360097323601	87.72919605077574	23	0.9130434782608695	methylated (>=50%)	Q11011	Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S)	cellular response to hypoxia [GO:0071456]; peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]	hit with GO BP
GN020953	Chromosome_9A	17547	6	315	33.51000170969397	0.6400028947330333	7.883022482673128	302	0.04304635761589404	0.9763617677286742	96	0	9.823168531216167	206	0.06310679611650485	0.7251381215469613	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020954	Chromosome_9A	14403	5	437	38.8877317225578	0.8045013189549899	4.910409556313994	426	0	0.5677785663591199	56	0	5.503830860246339	370	0	2.5944907110826394	54	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN020952	Chromosome_9A	1092	4	40	40.01831501831502	0.9157232704402516	0.37037037037037035	40	0	0.3787878787878788	32	0	0.3333333333333333	8	0	0.5154639175257731	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011144	Chromosome_9A	456	2	24	43.85964912280702	1.1033370299425345	0.9873060648801129	24	0	1.0101010101010102	18	0	0.9345794392523364	6	0	0.7305194805194806	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020951	Chromosome_9A	4541	7	92	37.28253688614843	0.5831709427957229	78.32708528584817	92	0.8804347826086957	79.88774555659495	59	0.847457627118644	76.7605633802817	33	0.9393939393939394	16.286438529784537	42	0.19047619047619047	methylated (>=50%)	Q0MW30	E3 ubiquitin-protein ligase NEURL1B (EC 2.3.2.27) (Neuralized-2) (NEUR2) (Neuralized-like protein 1B) (Neuralized-like protein 2) (Neuralized-like protein 3) (RING-type E3 ubiquitin transferase NEURL1B)	protein ubiquitination [GO:0016567]; ubiquitin-dependent endocytosis [GO:0070086]	hit with GO BP
GN020950	Chromosome_9A	3881	2	85	38.21180108219531	0.6038730911873355	89.3337763748131	85	0.9647058823529412	93.29140461215933	45	1	85.74596135571745	40	0.925	66.27094972067039	23	0.6521739130434783	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020949	Chromosome_9A	28114	9	372	34.317421925019566	0.45012417958729034	73.0767827831479	368	0.8614130434782609	68.46289752650176	22	0.6363636363636364	73.27550127458814	346	0.8757225433526011	24.73336719146775	37	0.2972972972972973	methylated (>=50%)	Q9R0D8	WD repeat-containing protein 54	fusion of sperm to egg plasma membrane involved in single fertilization [GO:0007342]; negative regulation of receptor internalization [GO:0002091]; regulation of epidermal growth factor receptor signaling pathway [GO:0042058]; regulation of MAPK cascade [GO:0043408]; single fertilization [GO:0007338]	hit with GO BP
GN020948	Chromosome_9A	21334	9	297	35.31920877472579	0.44872830293652904	86.39212175470009	269	0.9405204460966543	60.266821345707655	37	0.6756756756756757	89.38859689974053	232	0.9827586206896551	58.843967150979154	59	0.559322033898305	methylated (>=50%)	Q9H871	E3 ubiquitin-protein transferase RMND5A (EC 2.3.2.27) (P44CTLH) (Protein RMD5 homolog A)	proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]	hit with GO BP
GN020947	Chromosome_9A	1841	2	74	39.326453014665944	1.0402480089796355	0.844475721323012	74	0	1.5410958904109588	43	0	0.35842293906810035	31	0	0.7349762213575444	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020946	Chromosome_9A	1212	1	61	42.73927392739274	1.102393200626258	0.6472491909385113	61	0	0.6472491909385113	61	0	NA	NA	NA	0.4132231404958678	52	0	unmethylated (<10%)	Q8SWR3	Sex peptide receptor	G protein-coupled receptor signaling pathway [GO:0007186]; negative regulation of female receptivity, post-mating [GO:0045434]; regulation of egg-laying behavior [GO:0046662]	hit with GO BP
GN020945	Chromosome_9A	7300	3	50	36.986301369863014	0.20887889830974052	79.60550800148864	50	0.8	59.29824561403509	18	0.6666666666666666	85.07321681624941	32	0.875	47.76716969510317	51	0.47058823529411764	methylated (>=50%)	Q6PGH0	Ubiquitin domain-containing protein 2	NA	hit, no GO BP
GN020944	Chromosome_9A	1720	3	23	34.18604651162791	0.45980752243247014	93.97066811515481	23	1	96.8944099378882	2	1	93.69047619047619	21	1	91.6499665998664	33	1	methylated (>=50%)	E1BP36	MMS19 nucleotide excision repair protein homolog (MMS19-like protein)	protein maturation [GO:0051604]	hit with GO BP
GN003404	Chromosome_9A	1659	1	38	41.71187462326703	0.5268779460435262	89.65517241379311	9	1	89.65517241379311	9	1	NA	NA	NA	87.488	42	0.9523809523809523	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN001392	Chromosome_9A	616	1	13	41.07142857142857	0.5010636966587411	NA	0	NA	NA	NA	NA	NA	NA	NA	83.11688311688312	5	1	NA	NA	NA	NA	no Swiss-Prot hit
GN020942	Chromosome_9A	3458	3	87	34.70213996529786	0.8385366873388614	0.7784431137724551	86	0	0.9845288326300985	15	0	0.7443591532914632	71	0	0.7133592736705577	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020941	Chromosome_9A	15263	8	252	36.72279368407259	0.491233904814743	86.49219866973333	251	0.896414342629482	65.7158836689038	42	0.5238095238095238	89.09014616406742	209	0.9712918660287081	0.718336483931947	49	0	methylated (>=50%)	Q9NQZ5	StAR-related lipid transfer protein 7, mitochondrial (STARD7, mitochondrial) (Gestational trophoblastic tumor protein 1) (START domain-containing protein 7) (StARD7) (StarD7-I) [Cleaved into: StAR-related lipid transfer protein 7, mature (STARD7, mature) (StarD7-II)]	intermembrane phospholipid transfer [GO:0120010]; mitochondrial membrane organization [GO:0007006]; phosphatidylcholine biosynthetic process [GO:0006656]; regulation of cellular respiration [GO:0043457]; ubiquinone biosynthetic process [GO:0006744]	hit with GO BP
GN020940	Chromosome_9A	16743	7	409	34.84441259033626	0.8379193902861173	88.06525343969884	382	0.9764397905759162	68.52159468438538	28	0.7857142857142857	89.17997062864181	354	0.9915254237288136	57.23897911832947	62	0.532258064516129	methylated (>=50%)	A0JNK3	Serine protease HTRA2, mitochondrial (EC 3.4.21.108)	cellular response to oxidative stress [GO:0034599]; intrinsic apoptotic signaling pathway [GO:0097193]; mitochondrion organization [GO:0007005]; positive regulation of apoptotic process [GO:0043065]; programmed cell death [GO:0012501]; proteolysis [GO:0006508]; regulation of autophagy of mitochondrion [GO:1903146]	hit with GO BP
GN020939	Chromosome_9A	48701	9	1197	37.63372415350814	0.6950486447992807	23.794781070322866	1140	0.20087719298245615	20.15567390413765	56	0.17857142857142858	23.974012348169968	1084	0.20202952029520296	0.7053542802180186	43	0	sparse (10-50%)	Q9UGP5	DNA polymerase lambda (Pol Lambda) (EC 2.7.7.7) (EC 4.2.99.-) (DNA polymerase beta-2) (Pol beta2) (DNA polymerase kappa)	base-excision repair, gap-filling [GO:0006287]; DNA biosynthetic process [GO:0071897]; DNA replication [GO:0006260]; double-strand break repair via homologous recombination [GO:0000724]; double-strand break repair via nonhomologous end joining [GO:0006303]; nucleotide-excision repair [GO:0006289]; somatic hypermutation of immunoglobulin genes [GO:0016446]	hit with GO BP
GN020930	Chromosome_9A	8001	5	136	34.78315210598675	0.5621350195276177	80.38879935535859	133	0.8195488721804511	41.11842105263158	25	0.48	87.48810656517603	108	0.8981481481481481	77.52394988946205	19	0.8421052631578947	methylated (>=50%)	Q96J01	THO complex subunit 3 (Tho3) (TEX1 homolog) (hTREX45)	mRNA export from nucleus [GO:0006406]	hit with GO BP
GN020931	Chromosome_9A	16736	12	209	36.31094646271511	0.38912530287219627	90.26548672566372	209	0.937799043062201	87.31662591687042	63	0.9523809523809523	91.17342617860167	146	0.9315068493150684	40.59350503919373	40	0.625	methylated (>=50%)	Q22505	MICOS complex subunit MIC60-1 (Inner mitochondrial membrane protein 1) (Mitofilin homolog 1)	cristae formation [GO:0042407]; mitochondrion organization [GO:0007005]; response to reactive oxygen species [GO:0000302]	hit with GO BP
GN020932	Chromosome_9A	4606	4	142	38.68866695614416	0.8244647392869073	1.8022657054582905	142	0	0.5480817140009965	55	0	2.461377323906782	87	0	0.5971520440973818	55	0	unmethylated (<10%)	Q6P2X9	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN020933	Chromosome_9A	35035	23	418	35.744255744255746	0.3754789753382665	90.50252553183645	408	0.9950980392156863	90.978800180424	44	1	90.46013008913515	364	0.9945054945054945	84.69529085872576	25	0.92	methylated (>=50%)	Q6PCJ1	Dynactin subunit 1	cytoplasmic microtubule organization [GO:0031122]; establishment of mitotic spindle orientation [GO:0000132]; nuclear migration [GO:0007097]; positive regulation of intracellular protein transport [GO:0090316]; regulation of mitotic spindle organization [GO:0060236]	hit with GO BP
GN020934	Chromosome_9A	39289	14	700	35.21596375575861	0.5747366881217086	87.41288278775079	687	0.9956331877729258	95.25939177101968	39	1	87.02398368577381	648	0.9953703703703703	NA	NA	NA	methylated (>=50%)	A1A4N1	Equilibrative nucleoside transporter 3 (Solute carrier family 29 member 3)	adenosine transport [GO:0032238]; cytidine transport [GO:0015861]; guanine transmembrane transport [GO:1903716]; inosine transport [GO:0035340]; nucleobase transport [GO:0015851]; nucleoside transmembrane transport [GO:1901642]; nucleoside transport [GO:0015858]; purine nucleobase transmembrane transport [GO:1904823]; pyrimidine nucleobase transmembrane transport [GO:1904082]; uracil transmembrane transport [GO:1903791]; uridine transmembrane transport [GO:0015862]	hit with GO BP
GN012541	Chromosome_9A	594	1	3	39.225589225589225	0.13170731707317074	NA	0	NA	NA	NA	NA	NA	NA	NA	47.004608294930875	4	0.5	NA	NA	NA	NA	no Swiss-Prot hit
GN020935	Chromosome_9A	1225	2	47	43.3469387755102	0.884571656833825	0.336494340776996	47	0	0.32537960954446854	41	0	0.3976143141153082	6	0	5.83054965077437	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020936	Chromosome_9A	3463	2	78	35.54721339878718	0.7130254363457823	90.99923722349352	78	1	93.15789473684211	15	1	90.7359863072315	63	1	95.3287197231834	39	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020937	Chromosome_9A	8926	7	237	37.743670177010976	0.7460473416185868	0.8722678965309806	237	0	0.9243409791167408	71	0	0.8507018290089323	166	0	0.8828250401284109	46	0	unmethylated (<10%)	Q8IXQ6	Protein mono-ADP-ribosyltransferase PARP9 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 9) (ARTD9) (B aggressive lymphoma protein) (Poly [ADP-ribose] polymerase 9) (PARP-9)	cell migration [GO:0016477]; DNA damage checkpoint signaling [GO:0000077]; double-strand break repair [GO:0006302]; negative regulation of catalytic activity [GO:0043086]; negative regulation of gene expression [GO:0010629]; negative regulation of transcription by RNA polymerase II [GO:0000122]; nicotinate metabolic process [GO:1901847]; positive regulation of chromatin binding [GO:0035563]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of type II interferon-mediated signaling pathway [GO:0060335]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; post-transcriptional regulation of gene expression [GO:0010608]; regulation of response to type II interferon [GO:0060330]; viral protein processing [GO:0019082]	hit with GO BP
GN020938	Chromosome_9A	24305	10	667	35.76218885003086	0.859005030642729	0.6205717077937943	667	0	0.5315110098709187	33	0	0.6235326786660944	634	0	1.430374421539756	47	0	unmethylated (<10%)	Q8VHT6	Arsenite methyltransferase (EC 2.1.1.137) (Methylarsonite methyltransferase) (S-adenosyl-L-methionine:arsenic(III) methyltransferase)	arsonoacetate metabolic process [GO:0018872]; methylation [GO:0032259]; response to arsenic-containing substance [GO:0046685]; toxin metabolic process [GO:0009404]	hit with GO BP
GN020929	Chromosome_9A	1437	2	42	35.69937369519833	0.9176245210727969	0.7398975526465567	42	0	0.5060728744939271	28	0	1.0403120936280885	14	0	0.5971337579617835	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020928	Chromosome_9A	2903	2	68	35.652772993455045	0.7402168859024163	0.43564356435643564	67	0	0.18181818181818182	31	0	0.631578947368421	36	0	0.6778309409888357	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020927	Chromosome_9A	5716	4	93	35.81175647305808	0.5098764413734364	93.3743492664458	93	1	93.76899696048632	45	1	93.09414620987322	48	1	12.068965517241379	1	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020926	Chromosome_9A	22288	9	332	36.45908111988514	0.45163492698545815	88.6828456796164	330	0.990909090909091	92.77293695540749	40	1	88.25120354843945	290	0.9896551724137931	91.22426868905742	55	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020925	Chromosome_9A	9916	7	202	32.966922146026626	0.7509586473212612	80.06836146122623	200	0.875	72.07379134860051	60	0.7333333333333333	82.37452977337371	140	0.9357142857142857	1.4064015518913675	48	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020924	Chromosome_9A	13908	8	205	36.547310900201325	0.44194196909503225	83.97626112759644	195	0.9128205128205128	77.47619047619048	40	0.75	85.5481345002303	155	0.9548387096774194	3.7193575655114115	34	0	methylated (>=50%)	P42168	Casein kinase I isoform alpha (CKI-alpha) (EC 2.7.11.1) (CK1)	negative regulation of canonical Wnt signaling pathway [GO:0090090]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; Wnt signaling pathway [GO:0016055]; Wnt signaling pathway, regulating spindle positioning [GO:0060069]	hit with GO BP
GN020923	Chromosome_9A	28307	27	350	35.58483767266047	0.3957783272252202	95.1136733460412	341	0.9970674486803519	96.31849315068493	82	1	94.77935499198195	259	0.9961389961389961	88.9294403892944	25	1	methylated (>=50%)	Q5ZLT0	Exportin-7	protein export from nucleus [GO:0006611]	hit with GO BP
GN020922	Chromosome_9A	20762	20	236	38.32964068972161	0.3195697113703932	70.27274810909924	235	0.825531914893617	73.2422525824725	78	0.8717948717948718	69.38937351308485	157	0.802547770700637	0.9399264405394361	43	0	methylated (>=50%)	A8MT70	Zinc finger B-box domain-containing protein 1	NA	hit, no GO BP
GN020921	Chromosome_9A	18112	17	510	36.30742049469965	0.8550637221087336	2.9779722158262336	502	0.00199203187250996	1.395572666025024	90	0.011111111111111112	3.2782394301890236	412	0	0.5512402906539714	52	0	unmethylated (<10%)	F1RAX4	Receptor for retinol uptake stra6 (Stimulated by retinoic acid gene 6 protein homolog)	chordate embryonic development [GO:0043009]; retinol transport [GO:0034633]; vitamin A import into cell [GO:0071939]	hit with GO BP
GN020920	Chromosome_9A	11536	8	210	39.641123439667126	0.4642013347972798	90.08768913342503	197	0.9898477157360406	91.76672384219555	33	1	89.79054942831124	164	0.9878048780487805	83.66311516996448	24	0.9583333333333334	methylated (>=50%)	Q9VB74	NF-kappa-B-activating protein (NFKB activating protein) (dNKAP)	mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN020919	Chromosome_9A	15040	14	273	38.67686170212766	0.48929442036190857	3.2017585778457422	239	0	4.294478527607362	50	0	2.868545772012971	189	0	0.915948275862069	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN015901	Chromosome_9A	296	1	7	38.851351351351354	0.6906666666666667	0.5961251862891207	7	0	0.5961251862891207	7	0	NA	NA	NA	1.3051584835301429	50	0	unmethylated (<10%)	Q9CR78	Myb/SANT-like DNA-binding domain-containing protein 3	NA	hit, no GO BP
GN020918	Chromosome_9A	9379	4	153	34.630557628745066	0.544307816255189	44.79462285287528	150	0.38	54.02615278733654	43	0.5116279069767442	42.23578786722625	107	0.32710280373831774	0.8620689655172413	43	0	sparse (10-50%)	Q13115	Dual specificity protein phosphatase 4 (EC 3.1.3.16) (EC 3.1.3.48) (Dual specificity protein phosphatase hVH2) (Mitogen-activated protein kinase phosphatase 2) (MAP kinase phosphatase 2) (MKP-2)	dephosphorylation [GO:0016311]; endoderm formation [GO:0001706]; negative regulation of ERK1 and ERK2 cascade [GO:0070373]	hit with GO BP
GN020915	Chromosome_9A	14759	18	218	35.30727014025341	0.4790741512805241	94.82951717272275	217	1	96.36846767050487	42	1	94.5779643839583	175	1	93.02088639836984	34	0.9705882352941176	methylated (>=50%)	Q15459	Splicing factor 3A subunit 1 (SF3a120) (Spliceosome-associated protein 114) (SAP 114)	mRNA 3'-splice site recognition [GO:0000389]; mRNA cis splicing, via spliceosome [GO:0045292]; mRNA processing [GO:0006397]; mRNA splicing, via spliceosome [GO:0000398]; spliceosomal snRNP assembly [GO:0000387]; U2-type prespliceosome assembly [GO:1903241]	hit with GO BP
GN002840	Chromosome_9A	840	1	15	37.5	0.5239085239085239	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020916	Chromosome_9A	8854	5	159	35.71267223853626	0.5694915665623653	86.61102725739146	157	0.9808917197452229	94.43544030253916	33	1	85.07224819379516	124	0.9758064516129032	94.82158398607484	58	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020917	Chromosome_9A	52088	4	1415	36.08892643219168	0.8343754273506209	0.6889167523703527	1381	0	0.511751326762699	149	0	0.7031428354006545	1232	0	0.29027576197387517	91	0	unmethylated (<10%)	Q16281	Cyclic nucleotide-gated channel alpha-3 (CNG channel alpha-3) (CNG-3) (CNG3) (Cone photoreceptor cGMP-gated channel subunit alpha-3)	inorganic cation import across plasma membrane [GO:0098659]; monoatomic cation transmembrane transport [GO:0098655]; monoatomic cation transport [GO:0006812]; response to cAMP [GO:0051591]; response to magnesium ion [GO:0032026]; retina development in camera-type eye [GO:0060041]; signal transduction [GO:0007165]; visual perception [GO:0007601]	hit with GO BP
GN002368	Chromosome_9A	612	1	25	44.44444444444444	0.8388157894736842	1.0566762728146013	25	0	1.0566762728146013	25	0	NA	NA	NA	0.5421817393190197	107	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020914	Chromosome_9A	2043	4	18	38.081253059226626	0.24387235397103293	83.26055312954877	18	1	78.81944444444444	9	1	86.46616541353383	9	1	71.01351351351352	24	0.9166666666666666	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020913	Chromosome_9A	2503	2	86	36.91570115860967	1.0095629376368898	0.6855184233076264	85	0	0.27100271002710025	9	0	0.7210979297511049	76	0	0.6190208216094542	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020912	Chromosome_9A	43393	8	1209	36.11642430806812	0.8558550926360959	1.009866304425538	1089	0	0.5005005005005005	46	0	1.0287303058387396	1043	0	0.8614501076812635	42	0	unmethylated (<10%)	P77735	1-deoxyxylulose-5-phosphate synthase YajO (EC 1.1.-.-)	isoprenoid biosynthetic process via mevalonate [GO:1902767]; thiamine metabolic process [GO:0006772]	hit with GO BP
GN002754	Chromosome_9A	378	1	15	41.26984126984127	0.9325657894736842	0.639386189258312	15	0	0.639386189258312	15	0	NA	NA	NA	0.6451612903225806	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020911	Chromosome_9A	2449	2	78	33.56472029399755	1.13089656152316	0.8025682182985554	78	0	0.32	29	0	0.96411355115158	49	0	0.5528934758569849	75	0	unmethylated (<10%)	P42325	Neurocalcin homolog (DrosNCa)	negative regulation of neuronal signal transduction [GO:1902848]; positive regulation of circadian sleep/wake cycle, sleep [GO:0045938]; regulation of signal transduction [GO:0009966]	hit with GO BP
GN020910	Chromosome_9A	1580	2	31	35.56962025316456	0.620502685720077	0.9656004828002414	31	0	0.6825938566552902	10	0	1.0263929618768328	21	0	0.5190311418685121	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020909	Chromosome_9A	812	2	28	41.50246305418719	0.8011275546159267	0.5490196078431373	28	0	1.1061946902654867	12	0	0.24301336573511542	16	0	1.0803193987787694	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002115	Chromosome_9A	1098	2	12	38.16029143897996	0.30049261083743845	0.5714285714285714	12	0	0.4854368932038835	9	0	0.8849557522123894	3	0	0.6022700949733611	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020908	Chromosome_9A	20660	13	367	34.66118102613746	0.5938140189610859	82.3779360270685	359	0.8440111420612814	91.95844555598308	48	0.9375	81.286703479709	311	0.8295819935691319	92.46376811594203	37	1	methylated (>=50%)	Q8TF76	Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Germ cell-specific gene 2 protein) (H-haspin) (Haploid germ cell-specific nuclear protein kinase)	intracellular signal transduction [GO:0035556]; mitotic sister chromatid cohesion [GO:0007064]; mitotic spindle assembly checkpoint signaling [GO:0007094]; protein localization to chromosome, centromeric region [GO:0071459]; protein phosphorylation [GO:0006468]	hit with GO BP
GN020907	Chromosome_9A	2610	3	66	39.69348659003831	0.6532423208191126	93.29351072495248	66	1	94.72880061115356	24	1	92.50210614995788	42	1	87.93363499245852	49	1	methylated (>=50%)	Q7Z9I2	Uncharacterized oxidoreductase C663.09c (EC 1.-.-.-)	cellular detoxification of aldehyde [GO:0110095]	hit with GO BP
GN020906	Chromosome_9A	11007	6	210	35.60461524484419	0.6020158612337383	80.43478260869566	209	0.8660287081339713	63.63636363636363	25	0.68	81.95013941282598	184	0.8913043478260869	13.043478260869565	27	0.18518518518518517	methylated (>=50%)	Q8IV48	3'-5' exoribonuclease 1 (EC 3.1.13.1) (3'-5' exonuclease ERI1) (Eri-1 homolog) (Histone mRNA 3'-end-specific exoribonuclease) (Histone mRNA 3'-exonuclease 1) (Protein 3'hExo) (HEXO)	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000467]; maturation of 5.8S rRNA [GO:0000460]; negative regulation of regulatory ncRNA-mediated heterochromatin formation [GO:0060906]; rRNA 3'-end processing [GO:0031125]	hit with GO BP
GN020905	Chromosome_9A	921	4	18	43.648208469055376	0.4107023411371237	1.6129032258064515	17	0	1.5873015873015872	16	0	1.7857142857142858	1	0	0.7646854362182829	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020904	Chromosome_9A	210	1	20	55.23809523809524	1.2727272727272727	NA	0	NA	NA	NA	NA	NA	NA	NA	1.309328968903437	31	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020903	Chromosome_9A	11835	9	298	35.63160118293198	0.7935375435375436	0.49198940330515956	298	0	0.5487804878048781	91	0	0.4771751232702402	207	0	0.7482993197278912	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001566	Chromosome_9A	321	1	9	48.598130841121495	0.49571036376115307	28.51985559566787	9	0	28.51985559566787	9	0	NA	NA	NA	12.985436893203884	45	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020899	Chromosome_9A	10297	3	225	36.10760415655045	0.6712467677331034	22.243467176545572	225	0.18222222222222223	46.714031971580816	22	0.4090909090909091	19.448107943593385	203	0.15763546798029557	0.6473489519112207	57	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020898	Chromosome_9A	6670	6	68	34.93253373313343	0.33459629491923537	76.14818573965998	68	0.8235294117647058	76.21722846441948	9	0.7777777777777778	76.13736425007338	59	0.8305084745762712	4.628736740597878	30	0.03333333333333333	methylated (>=50%)	Q8N7B6	PACRG-like protein	NA	hit, no GO BP
GN020897	Chromosome_9A	8346	9	154	33.908459142104	0.6434579046230621	85.91409827949003	153	0.9019607843137255	76.03305785123968	16	0.8125	86.62817705222642	137	0.9124087591240876	0.9578544061302682	46	0	methylated (>=50%)	Q12907	Vesicular integral-membrane protein VIP36 (Glycoprotein GP36b) (Lectin mannose-binding 2) (Vesicular integral-membrane protein 36) (VIP36)	endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; positive regulation of phagocytosis [GO:0050766]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	hit with GO BP
GN020896	Chromosome_9A	501	1	32	43.11377245508982	1.4137566137566138	0.8620689655172413	32	0	0.8620689655172413	32	0	NA	NA	NA	1.1192423590185105	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020895	Chromosome_9A	1414	2	22	35.431400282885434	0.4964570699010533	81.53374233128834	22	1	88.3289124668435	7	1	79.48922585794094	15	1	67.8498985801217	18	0.6666666666666666	methylated (>=50%)	Q2HJ98	Oxaloacetate tautomerase FAHD1, mitochondrial (EC 5.3.2.2) (Acylpyruvase FAHD1) (EC 3.7.1.5) (Fumarylacetoacetate hydrolase domain-containing protein 1) (Oxaloacetate decarboxylase) (OAA decarboxylase) (EC 4.1.1.112)	oxaloacetate metabolic process [GO:0006107]	hit with GO BP
GN020892	Chromosome_9A	1183	3	32	35.756551141166526	0.8463980682377141	0.358974358974359	32	0	0.29791459781529295	19	0	0.4241781548250265	13	0	0.5985463873450192	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020893	Chromosome_9A	18812	16	271	35.52519668296832	0.45908296007333727	86.72571777642028	266	0.924812030075188	85.43439540866812	93	0.8602150537634409	87.30228859238314	173	0.9595375722543352	28.50911974623315	36	0.3611111111111111	methylated (>=50%)	Q6Q899	Antiviral innate immune response receptor RIG-I (ATP-dependent RNA helicase DDX58) (EC 3.6.4.13) (DEAD box protein 58) (RIG-I-like receptor 1) (RLR-1) (RNA sensor RIG-I) (Retinoic acid-inducible gene 1 protein) (RIG-1) (Retinoic acid-inducible gene I protein) (RIG-I)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; gene expression [GO:0010467]; innate immune response [GO:0045087]; mRNA transcription [GO:0009299]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; regulation of cell migration [GO:0030334]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN020894	Chromosome_9A	15638	12	223	36.0276250159867	0.44579514746580834	84.80093848522618	222	0.9369369369369369	90.45592705167174	28	0.9285714285714286	84.0253460063365	194	0.9381443298969072	0.9325985587113184	44	0	methylated (>=50%)	Q7L273	BTB/POZ domain-containing protein KCTD9	intracellular signal transduction [GO:0035556]; protein homooligomerization [GO:0051260]; protein ubiquitination [GO:0016567]	hit with GO BP
GN020891	Chromosome_9A	12481	17	164	34.812915631760276	0.4342954573133601	79.37885600752902	164	0.8719512195121951	83.91457150581238	75	0.8533333333333334	76.51773533424284	89	0.8876404494382022	12.638489946655724	37	0	methylated (>=50%)	Q7L0X2	Glutamate-rich protein 6 (Protein FAM194A)	NA	hit, no GO BP
GN020890	Chromosome_9A	23255	16	340	35.47624166845839	0.4688640127138306	78.2007704509404	330	0.9121212121212121	85.146804835924	71	0.971830985915493	76.63779702420608	259	0.8957528957528957	56.91275167785235	15	0.8	methylated (>=50%)	Q4R703	Centrosomal protein of 63 kDa (Cep63)	centriole replication [GO:0007099]; de novo centriole assembly involved in multi-ciliated epithelial cell differentiation [GO:0098535]; DNA damage checkpoint signaling [GO:0000077]; negative regulation of protein K63-linked ubiquitination [GO:1900045]; protein stabilization [GO:0050821]; signal transduction in response to DNA damage [GO:0042770]; spindle assembly [GO:0051225]	hit with GO BP
GN020889	Chromosome_9A	5036	5	65	33.30023828435266	0.46793473444053396	76.4219966957753	65	0.8	69.86062717770035	11	0.8181818181818182	77.45017745017745	54	0.7962962962962963	24.072869225764475	21	0.2857142857142857	methylated (>=50%)	Q86X83	COMM domain-containing protein 2	endocytic recycling [GO:0032456]	hit with GO BP
GN020888	Chromosome_9A	8536	3	152	35.60215557638238	0.5626460851563171	90.102245177611465	144	0.9791666666666666	92.37226277372262	49	1	89.18037646361346	95	0.968421052631579	75.44987146529563	33	0.8181818181818182	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020887	Chromosome_9A	8442	7	164	37.550343520492774	0.5546051453542754	91.24341293867026	164	1	93.73695198329854	29	1	90.56118806225903	135	1	62.147887323943664	22	0.6363636363636364	methylated (>=50%)	B9RK42	Glycerophosphocholine acyltransferase 1 (GPCAT) (EC 2.3.1.-)	phosphatidylcholine biosynthetic process [GO:0006656]	hit with GO BP
GN020886	Chromosome_9A	20453	13	302	34.90441500024446	0.485515967901018	82.08525690988668	261	0.9118773946360154	82.10659898477158	28	0.8928571428571429	82.0830298616169	233	0.9141630901287554	1.3230695212893915	66	0	methylated (>=50%)	Q54U75	Cyclic AMP receptor-like protein A	adenylate cyclase-activating G protein-coupled receptor signaling pathway [GO:0007189]; negative regulation of cell growth [GO:0030308]; signal transduction [GO:0007165]; sporulation resulting in formation of a cellular spore [GO:0030435]	hit with GO BP
GN020885	Chromosome_9A	1875	3	67	38.61333333333334	0.9682230169251164	0.24903154399557278	67	0	0.2098635886673662	19	0	0.26305900037579855	48	0	0.822429906542056	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020884	Chromosome_9A	20537	14	445	34.610702634269856	0.7293050228791499	1.1733356255641036	424	0	1.5726681127982647	33	0	1.1389627969938851	391	0	1.2033195020746887	57	0	unmethylated (<10%)	Q5UR46	Uncharacterized protein R571 (EC 3.1.1.-)	lipid catabolic process [GO:0016042]	hit with GO BP
GN020876	Chromosome_9A	13331	12	232	34.130972920261044	0.5994664719093371	77.98776545481672	232	0.9827586206896551	92.04498125780924	44	1	76.08155427538688	188	0.9787234042553191	69.95515695067265	10	0.9	methylated (>=50%)	Q60HF3	BLOC-3 complex member HPS1 (Hermansky-Pudlak syndrome 1 protein homolog)	melanosome assembly [GO:1903232]; vesicle-mediated transport [GO:0016192]	hit with GO BP
GN020875	Chromosome_9A	4326	5	103	35.13638465094776	0.7719125007146087	91.06265724212292	102	1	96.00443951165371	31	1	89.70206264323912	71	1	89.77272727272727	2	1	methylated (>=50%)	O95251	Histone acetyltransferase KAT7 (EC 2.3.1.48) (Histone acetyltransferase binding to ORC1) (Lysine acetyltransferase 7) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 2) (MYST-2)	DNA replication-dependent chromatin disassembly [GO:0140889]; internal peptidyl-lysine acetylation [GO:0018393]; natural killer cell differentiation [GO:0001779]; positive regulation of DNA replication [GO:0045740]; positive regulation of DNA-templated transcription, elongation [GO:0032786]; positive regulation of erythrocyte differentiation [GO:0045648]; positive regulation of hematopoietic stem cell proliferation [GO:1902035]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of transcription by RNA polymerase II [GO:0045944]; regulation of cell cycle [GO:0051726]; regulation of cell growth [GO:0001558]; regulation of DNA biosynthetic process [GO:2000278]; regulation of DNA replication [GO:0006275]; regulation of DNA-templated DNA replication initiation [GO:0030174]; regulation of DNA-templated transcription [GO:0006355]; regulation of nucleotide-excision repair [GO:2000819]; regulation of transcription by RNA polymerase II [GO:0006357]; response to actinomycin D [GO:0072716]; response to anisomycin [GO:0072739]; response to dithiothreitol [GO:0072720]; response to hydroxyurea [GO:0072710]; response to sorbitol [GO:0072708]; stress-activated protein kinase signaling cascade [GO:0031098]; T cell differentiation [GO:0030217]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN020874	Chromosome_9A	5986	4	198	35.466087537587704	1.052301299808225	0.7680628739841029	190	0	0	14	0	0.819672131147541	176	0	0.8590394377196408	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN013010	Chromosome_9A	1654	1	57	39.41958887545345	0.8883088983529944	62.736119061247855	46	0.6956521739130435	62.736119061247855	46	0.6956521739130435	NA	NA	NA	90.45698924731182	19	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020873	Chromosome_9A	8815	4	109	36.08621667612025	0.38070391205774695	78.74343933312751	109	0.8807339449541285	64.9712879409352	31	0.7419354838709677	81.93572922608861	78	0.9358974358974359	63.8420245398773	36	0.6111111111111112	methylated (>=50%)	Q0IJ33	E3 ubiquitin-protein ligase TM129 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TM129)	protein ubiquitination [GO:0016567]	hit with GO BP
GN020872	Chromosome_9A	3432	6	111	39.51048951048951	0.8291875984920379	0.5621033544877606	110	0	0.7858546168958742	39	0	0.43115837884449554	71	0	0.7875839703497799	66	0	unmethylated (<10%)	O08688	Calpain-5 (EC 3.4.22.-) (New calpain 3) (nCL-3)	proteolysis [GO:0006508]	hit with GO BP
GN020871	Chromosome_9A	7340	13	179	36.02179836512261	0.7534292136893292	0.7042993797960685	178	0	0.6094022054556006	77	0	0.7582000988956651	101	0	0.8615738081562321	33	0	unmethylated (<10%)	O08688	Calpain-5 (EC 3.4.22.-) (New calpain 3) (nCL-3)	proteolysis [GO:0006508]	hit with GO BP
GN020870	Chromosome_9A	8061	11	274	38.40714551544473	0.9220632511259061	0.726874439908394	273	0	0.5725190839694656	79	0	0.8156862745098039	194	0	0.5574136008918618	49	0	unmethylated (<10%)	P0DUE1	Stimulator of interferon genes protein (TIR-STING) (Probable NAD(+) hydrolase) (EC 3.2.2.6)	activation of innate immune response [GO:0002218]; autophagosome assembly [GO:0000045]; innate immune response [GO:0045087]; positive regulation of macroautophagy [GO:0016239]; positive regulation of type I interferon production [GO:0032481]; reticulophagy [GO:0061709]; signal transduction [GO:0007165]	hit with GO BP
GN020855	Chromosome_9A	384	1	19	43.489583333333336	1.0837789661319073	0.4716981132075472	19	0	0.4716981132075472	19	0	NA	NA	NA	0.7557677008750995	70	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020856	Chromosome_9A	2111	3	74	39.45997157745145	0.9109112961537564	0.7657945118059988	74	0	0.9053497942386831	62	0	0.2840909090909091	12	0	0.7859163784973279	59	0	unmethylated (<10%)	Q49LS8	XK-related protein 6	apoptotic process involved in development [GO:1902742]; engulfment of apoptotic cell [GO:0043652]; phosphatidylserine exposure on apoptotic cell surface [GO:0070782]	hit with GO BP
GN020857	Chromosome_9A	25485	5	365	34.77731999215224	0.4740687341756669	74.62088130210401	363	0.8099173553719008	84.05664687071722	49	0.9183673469387755	73.72288161384287	314	0.7929936305732485	0.6469500924214417	28	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020858	Chromosome_9A	7949	5	104	36.06742986539187	0.4050215666331556	89.48015995078437	102	0.9901960784313726	89.93147074327887	38	1	89.2942453854506	64	0.984375	86.55569782330346	22	1	methylated (>=50%)	Q80V91	E3 ubiquitin-protein ligase DTX3 (EC 2.3.2.27) (Protein deltex-3) (Deltex3) (mDTX3) (RING-type E3 ubiquitin transferase DTX3)	Notch signaling pathway [GO:0007219]; protein ubiquitination [GO:0016567]; regulation of Notch signaling pathway [GO:0008593]	hit with GO BP
GN020859	Chromosome_9A	6080	5	168	39.3421052631579	0.7155992997013432	0.8464849354375896	167	0	0.7024116132053383	100	0	1.0744720266765468	67	0	0.6738010305192231	40	0	unmethylated (<10%)	Q3UIR3	E3 ubiquitin-protein ligase DTX3L (EC 2.3.2.27) (Protein deltex-3-like) (RING-type E3 ubiquitin transferase DTX3L)	DNA damage checkpoint signaling [GO:0000077]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; endosome to lysosome transport [GO:0008333]; negative regulation of ubiquitin-protein transferase activity [GO:0051444]; Notch signaling pathway [GO:0007219]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein localization to early endosome [GO:1902966]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of receptor catabolic process [GO:2000646]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020860	Chromosome_9A	6326	8	158	37.03762251027506	0.7296957131176265	1.3729977116704806	158	0	1.1140080587817018	73	0	1.6146870161468703	85	0	3.1857908091344798	48	0	unmethylated (<10%)	Q8TDB6	E3 ubiquitin-protein ligase DTX3L (EC 2.3.2.27) (B-lymphoma- and BAL-associated protein) (Protein deltex-3-like) (RING-type E3 ubiquitin transferase DTX3L) (Rhysin-2) (Rhysin2)	DNA damage checkpoint signaling [GO:0000077]; DNA repair-dependent chromatin remodeling [GO:0140861]; double-strand break repair [GO:0006302]; endosome to lysosome transport [GO:0008333]; negative regulation of ubiquitin-protein transferase activity [GO:0051444]; Notch signaling pathway [GO:0007219]; positive regulation of chromatin binding [GO:0035563]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of DNA-templated transcription [GO:0045893]; positive regulation of protein binding [GO:0032092]; positive regulation of protein localization to early endosome [GO:1902966]; positive regulation of protein localization to nucleus [GO:1900182]; positive regulation of receptor catabolic process [GO:2000646]; protein autoubiquitination [GO:0051865]; protein K48-linked ubiquitination [GO:0070936]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020861	Chromosome_9A	1542	2	20	36.4461738002594	0.3905923477335765	88.51774530271399	20	1	90.31141868512111	4	1	88.06620209059234	16	1	40.204729968231554	41	0.5365853658536586	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020862	Chromosome_9A	9490	7	210	38.366701791359326	0.6031195525857059	84.87527628670667	208	0.9182692307692307	70.67448680351906	27	0.7037037037037037	87.25574536069804	181	0.9502762430939227	0.6695549428909019	58	0	methylated (>=50%)	Q2TBT5	Ribonuclease H2 subunit A (RNase H2 subunit A) (EC 3.1.26.4) (Ribonuclease HI large subunit) (RNase HI large subunit) (Ribonuclease HI subunit A)	ribonucleotide excision repair [GO:1990516]; RNA catabolic process [GO:0006401]	hit with GO BP
GN020863	Chromosome_9A	45520	32	678	35.68980667838313	0.46831872652151507	85.66419235848628	677	0.9704579025110783	76.97272537997085	156	0.9487179487179487	88.09745861506178	521	0.9769673704414588	69.30756843800322	36	0.8333333333333334	methylated (>=50%)	Q460N5	Protein mono-ADP-ribosyltransferase PARP14 (EC 2.4.2.-) (ADP-ribosyltransferase diphtheria toxin-like 8) (ARTD8) (B aggressive lymphoma protein 2) (Poly [ADP-ribose] polymerase 14) (PARP-14)	NAD+ catabolic process [GO:0019677]; negative regulation of gene expression [GO:0010629]; negative regulation of type II interferon-mediated signaling pathway [GO:0060336]; negative regulation of tyrosine phosphorylation of STAT protein [GO:0042532]; positive regulation of interleukin-4-mediated signaling pathway [GO:1902216]; positive regulation of tyrosine phosphorylation of STAT protein [GO:0042531]; protein poly-ADP-ribosylation [GO:0070212]	hit with GO BP
GN020864	Chromosome_9A	1425	4	36	36	0.7797537619699042	NA	0	NA	NA	NA	NA	NA	NA	NA	0.7547169811320755	22	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020865	Chromosome_9A	1425	4	36	36	0.7797537619699042	NA	0	NA	NA	NA	NA	NA	NA	NA	1.4760147601476015	7	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020866	Chromosome_9A	1425	4	36	36	0.7798011735019609	0.4366812227074236	9	0	0.5882352941176471	7	0	0	2	0	2.0833333333333335	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020850	Chromosome_9A	2681	7	82	36.14323013800821	0.9371568393411316	0.4557291666666667	15	0	0.37037037037037035	7	0	0.47393364928909953	8	0	2.830188679245283	7	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020853	Chromosome_9A	1425	4	36	35.92982456140351	0.7828236586705731	0	8	0	0	7	0	0	1	0	2.395209580838323	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020868	Chromosome_9A	1425	4	36	36	0.7797537619699042	NA	0	NA	NA	NA	NA	NA	NA	NA	3.153611393692777	23	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020867	Chromosome_9A	1425	4	36	36	0.7798011735019609	0.5322294500295683	13	0	0.6338028169014085	10	0	0	3	0	3.3333333333333335	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020851	Chromosome_9A	2788	7	82	36.37015781922525	0.8897329820314537	0.44439380127620787	43	0	0.5915215248110417	20	0	0.3663003663003663	23	0	1.1428571428571428	10	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020852	Chromosome_9A	2016	5	47	34.226190476190474	0.7964963307302393	0.46029919447640966	29	0	0.2159827213822894	12	0	0.5490196078431373	17	0	2.793296089385475	12	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020869	Chromosome_9A	1405	4	35	36.22775800711744	0.7592483942687747	0.352112676056338	18	0	0	9	0	0.5617977528089888	9	0	1.4555589965933726	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020848	Chromosome_9A	1395	4	33	36.0573476702509	0.7279411764705882	0.5603985056039851	19	0	0.7547169811320755	11	0	0.18315018315018314	8	0	0	1	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017400	Chromosome_9A	2282	1	85	42.72567922874671	0.81620029455081	0.8550330353672756	80	0	0.8550330353672756	80	0	NA	NA	NA	1.3612056392805056	67	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011463	Chromosome_9A	887	1	13	49.267192784667415	0.24231916950363552	0.4132231404958678	13	0	0.4132231404958678	13	0	NA	NA	NA	0.41050903119868637	28	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011462	Chromosome_9A	582	2	9	40.20618556701031	0.38545882699242034	0.6369426751592356	9	0	0.6369426751592356	9	0	NA	NA	NA	1.081568273997296	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020838	Chromosome_9A	10384	3	195	36.42141756548536	0.5665813060179258	1.2663661729984976	195	0	0.4975124378109453	16	0	1.3389711064129668	179	0	8.759311584895967	63	0	unmethylated (<10%)	Q91755	Glutamate receptor ionotropic, kainate 2 (GluK2) (Glutamate receptor 6) (GluR-6) (GluR6)	detection of cold stimulus involved in thermoception [GO:0120169]; modulation of chemical synaptic transmission [GO:0050804]; synaptic transmission, glutamatergic [GO:0035249]	hit with GO BP
GN003089	Chromosome_9A	4289	6	44	34.250408020517604	0.3504084967320261	3.027789299046039	44	0	3.4305317324185247	13	0	2.8993435448577682	31	0	0.7531865585168018	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020837	Chromosome_9A	5597	3	110	32.37448633196355	0.7500670061645671	1.0732237467735362	110	0	0.22346368715083798	17	0	1.190844416950201	93	0	7.021489255372314	71	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020836	Chromosome_9A	17033	7	258	33.998708389596665	0.5254684899271078	82.10488376284015	233	0.8669527896995708	44.469026548672566	13	0.38461538461538464	84.2660229943467	220	0.8954545454545455	1.4690451206715636	52	0	methylated (>=50%)	Q5ZKU1	DCN1-like protein 1 (DCUN1 domain-containing protein 1) (Defective in cullin neddylation protein 1-like protein 1)	positive regulation of protein neddylation [GO:2000436]; protein neddylation [GO:0045116]	hit with GO BP
GN020835	Chromosome_9A	21913	14	413	35.148085611280976	0.6108193711551154	88.48905109489051	397	0.9622166246851386	88.41584158415841	37	0.9459459459459459	88.49487785657999	360	0.9638888888888889	0.5446972124319128	48	0	methylated (>=50%)	Q6NX31	DNA replication licensing factor mcm7 (EC 3.6.4.12) (CDC47 homolog) (Minichromosome maintenance protein 7)	cell cycle DNA replication [GO:0044786]; DNA replication initiation [GO:0006270]; DNA strand elongation involved in DNA replication [GO:0006271]; double-strand break repair via break-induced replication [GO:0000727]; regulation of DNA-templated DNA replication initiation [GO:0030174]	hit with GO BP
GN020834	Chromosome_9A	12929	11	388	37.2109211849331	0.8669907795473596	0.657282456956724	366	0	0.5286343612334802	79	0	0.6890549067962574	287	0	0.3945480631276901	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020831	Chromosome_9A	5767	4	143	37.28108201838044	0.7190045824847251	1.054172767203514	143	0	0.9036144578313253	24	0	1.0703859876743431	119	0	0.45030556449018977	71	0	unmethylated (<10%)	Q5PRC1	LHFPL tetraspan subfamily member 6 protein	NA	hit, no GO BP
GN020830	Chromosome_9A	24572	10	288	34.59221878560964	0.39454441299084686	82.84250085411685	252	0.9642857142857143	87.20173535791757	38	1	82.02757502027575	214	0.9579439252336449	69.98341625207297	10	0.8	methylated (>=50%)	Q9VIH7	GTPase-activating protein skywalker	chemical synaptic transmission [GO:0007268]; negative regulation of neurotransmitter secretion [GO:0046929]; negative regulation of synaptic vesicle recycling [GO:1903422]; neuromuscular synaptic transmission [GO:0007274]; neuron projection development [GO:0031175]; synaptic vesicle endosomal processing [GO:0099532]; synaptic vesicle recycling via endosome [GO:0036466]	hit with GO BP
GN020829	Chromosome_9A	2197	3	64	37.096040054619934	0.847546714888487	0.6525285481239804	64	0	0.7444168734491315	34	0	0.5631536604987932	30	0	1.760797342192691	84	0	unmethylated (<10%)	P02717	Acetylcholine receptor subunit delta	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN011947	Chromosome_9A	780	1	9	38.97435897435897	0.3043176694988729	2.3255813953488373	3	0	2.3255813953488373	3	0	NA	NA	NA	1.4354066985645932	20	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020828	Chromosome_9A	589	2	8	36.33276740237691	0.4159604519774011	0	8	0	0	6	0	0	2	0	0.3733486502010339	76	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020827	Chromosome_9A	1597	2	61	38.94802755165936	1.0072063688999173	0.7843137254901961	61	0	0.857365549493375	47	0	0.691699604743083	14	0	0.39853869146462967	66	0	unmethylated (<10%)	P02717	Acetylcholine receptor subunit delta	acetylcholine receptor signaling pathway [GO:0095500]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; skeletal muscle contraction [GO:0003009]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020826	Chromosome_9A	727	2	29	41.54057771664374	0.9246929824561404	0.3440366972477064	29	0	0.3575685339690107	28	0	0	1	0	2.9793735676088615	30	0	unmethylated (<10%)	P04755	Acetylcholine receptor subunit beta-like 1 (Nicotinic acetylcholine receptor beta 1)	calcium ion transport [GO:0006816]; monoatomic ion transmembrane transport [GO:0034220]; regulation of membrane potential [GO:0042391]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020814	Chromosome_9A	2256	3	57	36.61347517730496	0.7755476213451703	0.5663430420711975	57	0	0.6622516556291391	25	0	0.5108556832694764	32	0	0.7815275310834814	61	0	unmethylated (<10%)	Q6P587	Oxaloacetate tautomerase FAHD1, mitochondrial (EC 5.3.2.2) (Acylpyruvase FAHD1) (EC 3.7.1.5) (Fumarylacetoacetate hydrolase domain-containing protein 1) (FAH domain-containing protein 1) (Oxaloacetate decarboxylase) (OAA decarboxylase) (ODx) (EC 4.1.1.112) (YisK-like protein)	oxaloacetate metabolic process [GO:0006107]	hit with GO BP
GN020813	Chromosome_9A	372	1	14	47.58064516129032	0.6675211484234812	0.38461538461538464	14	0	0.38461538461538464	14	0	NA	NA	NA	0.3938730853391685	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002685	Chromosome_9A	344	1	5	42.151162790697676	0.35002035002035004	0.2898550724637681	5	0	0.2898550724637681	5	0	NA	NA	NA	1.6739446870451238	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN001977	Chromosome_9A	237	1	3	50.63291139240506	0.19799498746867167	3.225806451612903	3	0	3.225806451612903	3	0	NA	NA	NA	1.460248783126014	30	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020812	Chromosome_9A	195	1	11	56.41025641025641	0.7941503146982599	NA	0	NA	NA	NA	NA	NA	NA	NA	0.6260671599317018	60	0	NA	NA	NA	NA	no Swiss-Prot hit
GN002908	Chromosome_9A	601	1	25	38.935108153078204	1.104129923574368	0.2766251728907331	25	0	0.2766251728907331	25	0	NA	NA	NA	0.7157464212678937	23	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020810	Chromosome_9A	35816	16	446	36.818740227831135	0.374950202826949	92.7684259226307	440	0.9954545454545455	95.92505854800937	36	1	92.50885841934986	404	0.995049504950495	94.75798737325425	49	1	methylated (>=50%)	Q6DE96	Protein IWS1 homolog A (IWS1-like protein A)	poly(A)+ mRNA export from nucleus [GO:0016973]	hit with GO BP
GN020809	Chromosome_9A	15575	12	405	37.309791332263245	0.7476992501523165	0.8850422962202338	402	0	0.9514271407110666	33	0	0.8778584588707056	369	0	0.4297994269340974	56	0	unmethylated (<10%)	Q05940	Synaptic vesicular amine transporter (Solute carrier family 18 member 2) (Vesicular amine transporter 2) (VAT2) (Vesicular monoamine transporter 2)	aminergic neurotransmitter loading into synaptic vesicle [GO:0015842]; chemical synaptic transmission [GO:0007268]; histamine secretion by mast cell [GO:0002553]; histamine uptake [GO:0051615]; negative regulation of reactive oxygen species biosynthetic process [GO:1903427]; neurotransmitter loading into synaptic vesicle [GO:0098700]; neurotransmitter transport [GO:0006836]; serotonin secretion by mast cell [GO:0002552]; serotonin uptake [GO:0051610]; somato-dendritic dopamine secretion [GO:0099123]	hit with GO BP
GN002170	Chromosome_9A	650	1	18	40.46153846153846	0.6777893639207507	0.5882352941176471	18	0	0.5882352941176471	18	0	NA	NA	NA	0.5150554675118859	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020823	Chromosome_9A	5909	6	52	34.35437468268743	0.2999796933698853	79.38063504508037	49	0.9795918367346939	82.52947481243301	16	1	77.56489493201484	33	0.9696969696969697	81.93832599118943	23	1	methylated (>=50%)	Q5BKC6	HSPB1-associated protein 1 (27 kDa heat shock protein-associated protein 1) (Protein associated with small stress protein 1)	NA	hit, no GO BP
GN020824	Chromosome_9A	16225	13	154	34.12634822804314	0.3273294870988702	86.87011294526499	153	0.9803921568627451	89.76271186440678	33	1	86.31837579206	120	0.975	23.30009066183137	37	0.5135135135135135	methylated (>=50%)	Q3ZBE5	Pre-mRNA-splicing factor SLU7	cellular response to heat [GO:0034605]; intracellular protein transport [GO:0006886]; mRNA cis splicing, via spliceosome [GO:0045292]	hit with GO BP
GN020825	Chromosome_9A	9571	9	75	33.998537247936476	0.2725807309071025	75.96218771100608	75	0.9333333333333333	80.18867924528301	34	0.9411764705882353	73.07837940174177	41	0.926829268292683	89.36627282491943	26	0.9615384615384616	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020821	Chromosome_9A	8023	4	107	37.00610744110682	0.391487217373063	85.57772933087372	107	0.9719626168224299	91.95519348268839	39	1	82.44561140285072	68	0.9558823529411765	93.45794392523365	8	1	methylated (>=50%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN011470	Chromosome_9A	2033	4	37	36.20265617314314	0.5617573915446256	1.9469983775013522	37	0	2.0327868852459017	32	0	1.5432098765432098	5	0	3.2220269478617456	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020819	Chromosome_9A	3501	4	94	36.50385604113111	0.8060655641337148	0.6034274680183442	94	0	0.796812749003984	37	0	0.5193905817174516	57	0	1.0138941043935412	61	0	unmethylated (<10%)	P49870	Probable nuclear hormone receptor HR38 (bHR38) (Nuclear receptor subfamily 4 group A member 4)	cellular response to corticotropin-releasing hormone stimulus [GO:0071376]	hit with GO BP
GN020818	Chromosome_9A	8982	10	95	34.03473613894455	0.36729048959152066	86.5847414234511	95	0.9578947368421052	68.31932773109244	23	0.8695652173913043	91.24009423859499	72	0.9861111111111112	13.495104299702001	42	0.09523809523809523	methylated (>=50%)	Q5PQM9	Kidney mitochondrial carrier protein 1 (Solute carrier family 25 member 30)	inorganic anion transport [GO:0015698]	hit with GO BP
GN020817	Chromosome_9A	478	2	11	38.49372384937239	0.6665821501014199	0.33613445378151263	11	0	0.36968576709796674	10	0	0	1	0	0.5445140212360469	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020816	Chromosome_9A	618	1	19	44.49838187702265	0.6212698412698413	0.6472491909385113	19	0	0.6472491909385113	19	0	NA	NA	NA	0.4759071980963712	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020805	Chromosome_9A	14814	14	270	37.11354124476846	0.5340958861672239	82.71703751133877	269	0.9851301115241635	88.03056027164686	55	0.9818181818181818	81.95300579798597	214	0.985981308411215	33.056478405315616	18	0.4444444444444444	methylated (>=50%)	P17139	Collagen alpha-1(IV) chain	embryo development ending in birth or egg hatching [GO:0009792]; extracellular matrix organization [GO:0030198]; muscle organ development [GO:0007517]; nematode larval development [GO:0002119]; positive regulation of axon regeneration [GO:0048680]; positive regulation of protein secretion [GO:0050714]; response to serotonin [GO:1904014]	hit with GO BP
GN020804	Chromosome_9A	14031	8	391	37.50979972917112	0.7931203029693215	3.3077113811058765	375	0	0.7080383173677635	68	0	3.6590857914884034	307	0	1.4088050314465408	79	0	unmethylated (<10%)	Q9VCA2	Organic cation transporter protein	apoptotic process [GO:0006915]	hit with GO BP
GN020803	Chromosome_9A	12455	8	357	36.83661180248896	0.8449700127702271	0.7344632768361582	355	0	0.772399588053553	60	0	0.7291964541035173	295	0	0.6852444038373686	69	0	unmethylated (<10%)	Q9Z306	Solute carrier family 22 member 4 (Organic cation/carnitine transporter 1) (Octn1)	acetylcholine uptake [GO:0051630]; amino acid import across plasma membrane [GO:0089718]; carnitine metabolic process [GO:0009437]; carnitine transport [GO:0015879]; lactation [GO:0007595]; liver regeneration [GO:0097421]; quaternary ammonium group transport [GO:0015697]; response to exogenous dsRNA [GO:0043330]; response to lipopolysaccharide [GO:0032496]; response to vitamin D [GO:0033280]; sodium-independent organic anion transport [GO:0043252]; sulfur amino acid transport [GO:0000101]; triglyceride metabolic process [GO:0006641]; xenobiotic transport [GO:0042908]	hit with GO BP
GN020802	Chromosome_9A	2812	6	53	39.82930298719772	0.4792169749741961	14.666666666666666	52	0.15384615384615385	9.504412763068567	32	0.125	25.498575498575498	20	0.2	1.0945505356311132	73	0	sparse (10-50%)	Q9P2Z0	THAP domain-containing protein 10	NA	hit, no GO BP
GN002119	Chromosome_9A	159	1	9	56.60377358490566	0.7070158102766798	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8130081300813008	54	0	NA	NA	NA	NA	no Swiss-Prot hit
GN016827	Chromosome_9A	441	1	13	41.043083900226755	0.7048192771084337	14.097496706192358	13	0	14.097496706192358	13	0	NA	NA	NA	13.809154383242824	10	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN016826	Chromosome_9A	668	2	8	35.778443113772454	0.37772123268306473	20.02262443438914	7	0	20.02262443438914	7	0	NA	NA	NA	0.22727272727272727	27	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN015873	Chromosome_9A	1212	1	35	48.34983498349835	0.49971727452643483	0.44052863436123346	9	0	0.44052863436123346	9	0	NA	NA	NA	0	5	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020798	Chromosome_9A	11406	4	265	32.842363668244786	0.8625411460540453	0.5588942307692307	263	0	0.3146633102580239	45	0	0.5846787588864527	218	0	0.44052863436123346	65	0	unmethylated (<10%)	Q06453	Homeobox protein aristaless	antennal morphogenesis [GO:0048800]; chaeta development [GO:0022416]; elongation of arista core [GO:0035015]; imaginal disc-derived leg morphogenesis [GO:0007480]; leg disc development [GO:0035218]; negative regulation of DNA-templated transcription [GO:0045892]; neuron development [GO:0048666]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN020799	Chromosome_9A	11273	5	203	35.17253614831899	0.582269131086817	1.9648704971717774	197	0	0.6376811594202898	55	0	2.238984674329502	142	0	0.8106819265617549	51	0	unmethylated (<10%)	Q503M4	Monocarboxylate transporter 12-B (MCT 12-B) (Solute carrier family 16 member 12-B)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN020792	Chromosome_9A	3151	4	22	33.989209774674705	0.24436689227298364	86.9807811531308	22	0.9545454545454546	88.57938718662953	11	1	85.69832402234637	11	0.9090909090909091	50.3690036900369	14	0.42857142857142855	methylated (>=50%)	Q91854	Beta-TrCP (Beta-transducin repeat-containing protein)	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	hit with GO BP
GN020793	Chromosome_9A	2396	2	33	40.108514190317194	0.34297165760091614	76.31862217438106	31	0.9354838709677419	79.84126984126983	25	0.96	68.89632107023411	6	0.8333333333333334	82.02388434946575	27	0.9629629629629629	methylated (>=50%)	Q9H1Q7	PC-esterase domain-containing protein 1A (Protein FAM113A) (Sarcoma antigen NY-SAR-23)	NA	hit, no GO BP
GN020794	Chromosome_9A	2087	3	30	38.28461907043603	0.39389745202893994	74.62574850299401	30	0.9666666666666667	75.16703786191536	24	0.9583333333333334	73.51598173515981	6	1	83.9645447219984	24	1	methylated (>=50%)	Q6GM59	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN020795	Chromosome_9A	572	3	15	38.28671328671329	0.7189542483660131	0.8025682182985554	15	0	0.89086859688196	11	0	0.5747126436781609	4	0	8.085106382978724	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020796	Chromosome_9A	20547	36	391	35.688908356451066	0.5992673072972541	72.3331810820911	338	0.7781065088757396	81.33099824868651	125	0.864	67.36692872792885	213	0.7276995305164319	2.7237354085603114	29	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020797	Chromosome_9A	13933	15	188	36.165936984138376	0.4139852650930383	79.85890932149651	184	0.9456521739130435	80.98610732770362	73	0.9726027397260274	79.3963107881498	111	0.9279279279279279	2.9251984956122024	40	0.025	methylated (>=50%)	Q86WZ0	HEAT repeat-containing protein 4	NA	hit, no GO BP
GN020791	Chromosome_9A	9757	12	91	32.448498513887465	0.35478015215931974	84.15607449009755	90	0.9222222222222223	78.86904761904762	12	0.9166666666666666	84.73908762717427	78	0.9230769230769231	0.737291424136593	42	0	methylated (>=50%)	Q8K2Q9	Shootin-1 (Shootin1)	actin filament bundle retrograde transport [GO:0061573]; axonogenesis [GO:0007409]; Cdc42 protein signal transduction [GO:0032488]; cytoplasmic actin-based contraction involved in cell motility [GO:0060327]; endoplasmic reticulum polarization [GO:0061163]; membrane depolarization [GO:0051899]; netrin-activated signaling pathway [GO:0038007]; neuron projection morphogenesis [GO:0048812]; positive regulation of axon extension [GO:0045773]; positive regulation of neuron migration [GO:2001224]; Ras protein signal transduction [GO:0007265]; regulation of establishment of cell polarity [GO:2000114]; regulation of neuron migration [GO:2001222]; substrate-dependent cell migration, cell extension [GO:0006930]	hit with GO BP
GN020790	Chromosome_9A	26998	16	355	36.01377879842951	0.4084244888413658	77.83807865214045	333	0.9279279279279279	89.47368421052632	36	0.9722222222222222	76.9203880101372	297	0.9225589225589226	48.644652538196155	31	0.5161290322580645	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020781	Chromosome_9A	7573	7	107	33.68546150798891	0.5001123277897718	80.23357664233576	107	0.9252336448598131	94.94614747307374	20	1	77.08665603402446	87	0.9080459770114943	83.99612027158099	16	0.875	methylated (>=50%)	P91891	Protein Mo25 (dMo25)	intracellular signal transduction [GO:0035556]; positive regulation of TORC1 signaling [GO:1904263]	hit with GO BP
GN020782	Chromosome_9A	24850	11	340	34.37826961770624	0.4668504672814572	79.08827404479578	289	0.9342560553633218	63.22314049586777	22	0.6818181818181818	79.94113400344311	267	0.9550561797752809	30.515344528083382	31	0.25806451612903225	methylated (>=50%)	P49326	Flavin-containing monooxygenase 5 (FMO 5) (Baeyer-Villiger monooxygenase 1) (hBVMO1) (EC 1.14.13.-) (Dimethylaniline monooxygenase [N-oxide-forming] 5) (EC 1.14.13.8) (Dimethylaniline oxidase 5) (NADPH oxidase) (EC 1.6.3.1)	regulation of cholesterol metabolic process [GO:0090181]; xenobiotic metabolic process [GO:0006805]	hit with GO BP
GN020783	Chromosome_9A	8827	11	99	34.417129262490086	0.38342276045713797	84.2097217976154	99	0.898989898989899	84.2483660130719	28	0.8928571428571429	84.19792498004789	71	0.9014084507042254	0.9003215434083601	58	0	methylated (>=50%)	Q27968	DnaJ homolog subfamily C member 3 (Interferon-induced, double-stranded RNA-activated protein kinase inhibitor) (Protein kinase inhibitor of 58 kDa) (Protein kinase inhibitor p58)	cellular response to cold [GO:0070417]; negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation [GO:1903912]; positive regulation of translation initiation in response to endoplasmic reticulum stress [GO:0036494]; protein folding in endoplasmic reticulum [GO:0034975]	hit with GO BP
GN020784	Chromosome_9A	16316	20	187	35.149546457465064	0.3712457370690893	87.15462918080465	168	0.9702380952380952	87.09297763828953	54	0.9814814814814815	87.1748647952614	114	0.9649122807017544	83.30914368650218	12	0.9166666666666666	methylated (>=50%)	Q8BMD2	Cilium assembly protein DZIP1 (DAZ-interacting protein 1 homolog) (DAZ-interacting zinc finger protein 1)	ciliary basal body organization [GO:0032053]; cilium assembly [GO:0060271]; cilium organization [GO:0044782]; establishment of protein localization [GO:0045184]; heart development [GO:0007507]; positive regulation of cilium assembly [GO:0045724]; positive regulation of protein localization to cilium [GO:1903566]; protein localization to cilium [GO:0061512]; protein-containing complex localization to centriolar satellite [GO:0140706]; smoothened signaling pathway [GO:0007224]; sperm flagellum assembly [GO:0120316]; spermatogenesis [GO:0007283]	hit with GO BP
GN020785	Chromosome_9A	2317	6	63	40.22442813983599	0.6794025654869399	0.43203722166832836	63	0	0.33489618218352313	32	0	0.5277044854881267	31	0	1.8836192398250926	65	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020786	Chromosome_9A	8460	5	101	36.21749408983452	0.36444924428156844	75.59091972852796	90	0.9111111111111111	88.43683083511777	8	1	74.01471361008933	82	0.9024390243902439	0.8379888268156425	60	0	methylated (>=50%)	Q9QZC7	Pleckstrin homology domain-containing family B member 2 (PH domain-containing family B member 2) (Evectin-2)	regulation of cell differentiation [GO:0045595]	hit with GO BP
GN020787	Chromosome_9A	21119	10	243	34.50920971636915	0.38839319771137953	73.78009573480031	241	0.8340248962655602	74.24130273871206	21	0.8571428571428571	73.73082397596077	220	0.8318181818181818	82.71763572116929	54	1	methylated (>=50%)	Q9Y5K3	Choline-phosphate cytidylyltransferase B (EC 2.7.7.15) (CCT-beta) (CTP:phosphocholine cytidylyltransferase B) (CCT B) (CT B) (Phosphorylcholine transferase B)	CDP-choline pathway [GO:0006657]; phosphatidylcholine biosynthetic process [GO:0006656]	hit with GO BP
GN020788	Chromosome_9A	12046	5	137	34.25203387016437	0.3926852088036762	71.99424046076314	110	0.8363636363636363	77.5269872423945	32	0.875	70.75159797222834	78	0.8205128205128205	35.47646383467279	14	0.2857142857142857	methylated (>=50%)	Q8BGC3	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN020789	Chromosome_9A	5251	3	156	37.55475147590935	0.847100139398477	0.7919811904467269	156	0	0.907258064516129	115	0	0.6087792374239026	41	0	0.46547711404189296	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020775	Chromosome_9A	7378	7	216	35.009487666034154	0.955873744013973	0.599661061139356	213	0	0.5063291139240507	39	0	0.6167129201356768	174	0	0.7706255666364461	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020776	Chromosome_9A	14518	7	418	34.74996555999449	0.9540723328135755	0.8695199416848901	404	0	0.3058103975535168	63	0	0.9336580839712364	341	0	0.38699690402476783	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020777	Chromosome_9A	6397	7	201	34.547444114428636	1.053464816011916	0.8303886925795053	201	0	0.3842869342442357	43	0	0.9467587435954555	158	0	0.527169505271695	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020774	Chromosome_9A	10241	10	305	38.65833414705595	0.7975930017231148	1.0629795396419437	291	0	1.1374407582938388	81	0	1.0377661281694661	210	0	0.3270645952575634	38	0	unmethylated (<10%)	P46197	Atrial natriuretic peptide receptor 2 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type B) (ANP-B) (ANPR-B) (NPR-B) (Guanylate cyclase B) (GC-B)	cGMP biosynthetic process [GO:0006182]; intracellular signal transduction [GO:0035556]; receptor guanylyl cyclase signaling pathway [GO:0007168]	hit with GO BP
GN020773	Chromosome_9A	5353	9	161	37.28750233513917	0.8695686830040036	0.6052141527001862	161	0	0.40575433419402435	75	0	0.7500669702652023	86	0	0.2506265664160401	68	0	unmethylated (<10%)	P16066	Atrial natriuretic peptide receptor 1 (EC 4.6.1.2) (Atrial natriuretic peptide receptor type A) (ANP-A) (ANPR-A) (NPR-A) (Guanylate cyclase A) (GC-A)	blood vessel diameter maintenance [GO:0097746]; body fluid secretion [GO:0007589]; cell surface receptor signaling pathway [GO:0007166]; cGMP biosynthetic process [GO:0006182]; dopamine metabolic process [GO:0042417]; intracellular signal transduction [GO:0035556]; negative regulation of angiogenesis [GO:0016525]; negative regulation of cell growth [GO:0030308]; negative regulation of smooth muscle cell proliferation [GO:0048662]; positive regulation of renal sodium excretion [GO:0035815]; positive regulation of urine volume [GO:0035810]; receptor guanylyl cyclase signaling pathway [GO:0007168]; regulation of blood pressure [GO:0008217]; regulation of vascular permeability [GO:0043114]	hit with GO BP
GN020772	Chromosome_9A	3734	3	127	36.234600964113554	1.036224980333887	2.1529659741041853	127	0	0.9919697685403873	42	0	2.696132596685083	85	0	3.2705954952175254	54	0	unmethylated (<10%)	A0A1S4GHV7	Core alpha-(1,3)-fucosyltransferase (EC 2.4.1.214) (Fucosyltransferase A) (AgFucTA)	N-glycan processing [GO:0006491]	hit with GO BP
GN020768	Chromosome_9A	12569	13	292	34.37027607606015	0.7872274388534484	0.6859138242813494	290	0	0.5780346820809249	46	0	0.7035102988105599	244	0	0.9933774834437086	50	0	unmethylated (<10%)	Q9X6U2	D-beta-hydroxybutyrate dehydrogenase (BDH) (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (3-HBDH)	lipid metabolic process [GO:0006629]; monocarboxylic acid metabolic process [GO:0032787]	hit with GO BP
GN003311	Chromosome_9A	873	1	27	38.487972508591064	0.8437802040451047	0.6340579710144928	27	0	0.6340579710144928	27	0	NA	NA	NA	0.7640878701050621	79	0	unmethylated (<10%)	Q6AZB8	Putative nuclease HARBI1 (EC 3.1.-.-) (Harbinger transposase-derived nuclease)	NA	hit, no GO BP
GN020769	Chromosome_9A	23032	31	252	34.72994095171935	0.3651898160732083	80.92181281294133	249	0.8835341365461847	76.91783931003178	77	0.8311688311688312	82.50089509488005	172	0.9069767441860465	0.6688963210702341	44	0	methylated (>=50%)	Q3UZY0	Protein SFI1 homolog	NA	hit, no GO BP
GN020770	Chromosome_9A	21280	12	546	36.8515037593985	0.755991730657255	0.6968024900962083	529	0	1.2184115523465704	55	0	0.6524408965305496	474	0	1.024498886414254	49	0	unmethylated (<10%)	B0JZG0	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2)	L-ascorbic acid transmembrane transport [GO:0015882]	hit with GO BP
GN020766	Chromosome_9A	2865	4	28	35.35776614310646	0.31291933218910906	77.6393831553974	28	0.9285714285714286	81.81818181818181	9	1	76.53673163418291	19	0.8947368421052632	85.04772004241782	18	0.9444444444444444	methylated (>=50%)	Q9D8Z1	Activating signal cointegrator 1 complex subunit 1 (ASC-1 complex subunit p50) (Trip4 complex subunit p50)	regulation of DNA-templated transcription [GO:0006355]	hit with GO BP
GN020767	Chromosome_9A	518	3	16	36.486486486486484	0.9287315105333931	0.6486486486486487	16	0	1.188118811881188	9	0	0	7	0	0.5073280721533259	69	0	unmethylated (<10%)	F1QEB7	WD repeat-containing protein 11	cilium assembly [GO:0060271]; head development [GO:0060322]; heart development [GO:0007507]; intracellular protein transport [GO:0006886]; multicellular organism growth [GO:0035264]; neural crest cell migration [GO:0001755]; regulation of smoothened signaling pathway [GO:0008589]; vesicle tethering to Golgi [GO:0099041]	hit with GO BP
GN020765	Chromosome_9A	25194	31	236	34.150988330554895	0.3272163411151207	78.49218356026223	236	0.9110169491525424	79.76190476190476	71	0.971830985915493	78.00974251913709	165	0.8848484848484849	6.751687921980495	21	0.14285714285714285	methylated (>=50%)	A0A1L8GXY4	Cilia- and flagella-associated protein 43	epithelial cilium movement involved in extracellular fluid movement [GO:0003351]; regulation of cilium beat frequency [GO:0003356]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN020763	Chromosome_9A	263	2	7	55.133079847908746	0.35636856368563685	0	7	0	0	7	0	NA	NA	NA	1.5037593984962405	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020762	Chromosome_9A	36677	5	618	33.83864547263953	0.5887784367271376	85.9006571318129	613	0.9804241435562806	81.07202680067002	13	1	85.9570224664177	600	0.98	1.0209869540555871	54	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020811	Chromosome_9A	2600	9	39	33.57692307692308	0.5412618768015374	2.165874273639725	34	0	2.122241086587436	22	0	2.237762237762238	12	0	6.684403059527768	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020761	Chromosome_9A	5595	5	154	35.22788203753351	0.8874841894057689	0.8814660171653909	154	0	0.6263048016701461	44	0	0.9543692215926036	110	0	1.525989508822127	76	0	unmethylated (<10%)	A2RU49	Hydroxylysine kinase (5-hydroxy-L-lysine kinase) (EC 2.7.1.81) (Aminoglycoside phosphotransferase domain-containing protein 1)	L-lysine catabolic process [GO:0019477]	hit with GO BP
GN020760	Chromosome_9A	7413	4	99	37.66356400917307	0.38146749334148367	85.07303170644816	99	0.9595959595959596	89.90057561486132	43	0.9302325581395349	82.58169052119902	56	0.9821428571428571	69.9537750385208	9	0.8888888888888888	methylated (>=50%)	P49701	Vitamin D3 receptor (VDR) (1,25-dihydroxyvitamin D3 receptor) (Nuclear receptor subfamily 1 group I member 1)	cell differentiation [GO:0030154]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; vitamin D receptor signaling pathway [GO:0070561]	hit with GO BP
GN019856	Chromosome_9A	288	1	10	49.30555555555556	0.5806451612903226	81.92771084337349	10	1	81.92771084337349	10	1	NA	NA	NA	85.30259365994236	13	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020759	Chromosome_9A	17908	6	303	34.828009828009826	0.5580574203896728	0.6620428751576293	303	0	0.4873294346978557	63	0	0.7041151619464873	240	0	1.2536377882247594	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020757	Chromosome_9A	7828	9	73	34.95145631067961	0.3098602699600206	85.25400613706103	73	0.9863013698630136	84.58692971639951	12	1	85.36102868447082	61	0.9836065573770492	90.38406006352874	48	0.9375	methylated (>=50%)	Q6P7N1	Protein MAK16 homolog (MAK16-like protein)	maturation of 5.8S rRNA [GO:0000460]; maturation of LSU-rRNA [GO:0000470]	hit with GO BP
GN020758	Chromosome_9A	23436	17	335	35.55214200375491	0.4537852632411256	90.03322259136213	275	0.9745454545454545	82.2412155745489	38	0.8947368421052632	91.12351338781477	237	0.9873417721518988	6.531241964515299	48	0	methylated (>=50%)	Q6GPF3	Cullin-3-B (CUL-3-B)	apoptotic process [GO:0006915]; cell migration [GO:0016477]; COPII vesicle coating [GO:0048208]; embryonic cleavage [GO:0040016]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; integrin-mediated signaling pathway [GO:0007229]; mitotic metaphase chromosome alignment [GO:0007080]; negative regulation of Rho protein signal transduction [GO:0035024]; positive regulation of mitotic cell cycle phase transition [GO:1901992]; positive regulation of mitotic metaphase/anaphase transition [GO:0045842]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein monoubiquitination [GO:0006513]; protein polyubiquitination [GO:0000209]; protein ubiquitination [GO:0016567]; regulation of gene expression [GO:0010468]; response to stress [GO:0006950]; stem cell division [GO:0017145]; stress fiber assembly [GO:0043149]	hit with GO BP
GN020756	Chromosome_9A	52415	15	663	35.38681675093008	0.4101718100575937	84.41322146972607	644	0.9782608695652174	84.09542743538768	38	1	84.43024494142705	606	0.976897689768977	85.73692551505546	9	1	methylated (>=50%)	A0JPG1	FHF complex subunit HOOK interacting protein 2A (FHIP2A)	NA	hit, no GO BP
GN020754	Chromosome_9A	14239	12	411	36.034833906875484	0.8891829925337077	1.178356366156912	411	0	1.3485901103391909	55	0	1.1581701880209343	356	0	1.7509727626459144	49	0	unmethylated (<10%)	Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase (EC 1.14.14.19) (EC 1.14.14.32) (17-alpha-hydroxyprogesterone aldolase) (CYPXVII) (Cytochrome P450 17A1) (Cytochrome P450-C17) (Cytochrome P450c17)	hormone biosynthetic process [GO:0042446]; progesterone metabolic process [GO:0042448]; steroid biosynthetic process [GO:0006694]	hit with GO BP
GN020755	Chromosome_9A	34481	18	594	36.40265653548331	0.5221926165032661	92.94269641751676	565	0.9982300884955753	95.46452084857351	83	1	92.50749566040713	482	0.9979253112033195	93.01115241635688	18	1	methylated (>=50%)	Q8BVE8	Histone-lysine N-methyltransferase NSD2 (EC 2.1.1.357) (Multiple myeloma SET domain-containing protein) (MMSET) (Nuclear SET domain-containing protein 2) (Wolf-Hirschhorn syndrome candidate 1 protein homolog)	atrial septum primum morphogenesis [GO:0003289]; atrial septum secundum morphogenesis [GO:0003290]; bone development [GO:0060348]; membranous septum morphogenesis [GO:0003149]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of isotype switching to IgA isotypes [GO:0048298]; regulation of DNA-templated transcription [GO:0006355]; regulation of double-strand break repair via nonhomologous end joining [GO:2001032]; regulation of establishment of protein localization [GO:0070201]	hit with GO BP
GN016131	Chromosome_9A	1963	3	59	38.92002037697402	0.8011967763135139	12.467277486910994	59	0.03389830508474576	32.292917166866744	14	0.14285714285714285	5.038236617183985	45	0	2.8209556706966032	52	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN021251	Chromosome_9A	246	1	1	42.27642276422764	0.10336134453781512	NA	0	NA	NA	NA	NA	NA	NA	NA	67.60259179265658	8	0.75	NA	NA	NA	NA	no Swiss-Prot hit
GN020748	Chromosome_9A	317	2	9	38.48580441640379	0.7769607843137255	0	9	0	0	9	0	NA	NA	NA	2.58493353028065	78	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003677	Chromosome_9A	442	1	8	42.081447963800905	0.40959110390362563	1.3100436681222707	8	0	1.3100436681222707	8	0	NA	NA	NA	0.6806028196402528	41	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN017621	Chromosome_9A	624	1	17	43.58974358974359	0.5952861952861953	0.1669449081803005	15	0	0.1669449081803005	15	0	NA	NA	NA	0.4032258064516129	9	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020749	Chromosome_9A	8001	5	190	34.833145856767906	0.7829694525564362	0.5202709335427506	190	0	0.6230529595015576	35	0	0.5010487065951993	155	0	0.4595060310166571	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020750	Chromosome_9A	4374	4	94	36.41975308641975	0.6482247587816107	1.0089686098654709	94	0	0.7142857142857143	23	0	1.099706744868035	71	0	4.280510018214936	36	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020751	Chromosome_9A	7488	8	188	36.04433760683761	0.7742139859032232	1.2959824543913867	188	0	1.6538351867693184	82	0	1.1036174126302882	106	0	2.0901068276823036	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020752	Chromosome_9A	32586	15	346	34.643712023568405	0.3539451596959779	82.4329772223342	329	0.9300911854103343	85.30676045330208	46	0.9565217391304348	82.00752097194099	283	0.9257950530035336	91.20065789473684	15	1	methylated (>=50%)	P83829	Intraflagellar transport protein 81 homolog (Carnitine deficiency-associated protein expressed in ventricle 1) (CDV-1)	cilium assembly [GO:0060271]; intraciliary transport [GO:0042073]; intraciliary transport involved in cilium assembly [GO:0035735]; regulation of smoothened signaling pathway [GO:0008589]; sperm flagellum assembly [GO:0120316]; spermatogenesis [GO:0007283]	hit with GO BP
GN020753	Chromosome_9A	28009	5	185	41.51165696740333	0.18392458391560362	65.21609980692114	120	0.7083333333333334	75.97597597597597	10	0.9	64.65625	110	0.6909090909090909	55.824175824175825	27	0.5555555555555556	methylated (>=50%)	Q498J9	Metallo-beta-lactamase domain-containing protein 1 (EC 3.1.27.-) (Endoribonuclease MBLAC1)	histone mRNA metabolic process [GO:0008334]; positive regulation of G1/S transition of mitotic cell cycle [GO:1900087]	hit with GO BP
GN020746	Chromosome_9A	3482	7	96	37.248707639287765	0.8025352924229329	0.8507702920211543	96	0	0.9312638580931264	56	0	0.7640878701050621	40	0	0.33783783783783783	32	0	unmethylated (<10%)	O43301	Heat shock 70 kDa protein 12A (Heat shock protein family A member 12A)	NA	hit, no GO BP
GN020747	Chromosome_9A	6359	3	137	40.39943387325051	0.5305272247623177	0.7631645891630628	136	0	0.6126295947219604	72	0	0.9397457158651189	64	0	0.5985463873450192	47	0	unmethylated (<10%)	Q96MM6	Heat shock 70 kDa protein 12B (Heat shock protein family A member 12B)	NA	hit, no GO BP
GN020745	Chromosome_9A	207	1	12	60.38647342995169	0.7885714285714286	1.092896174863388	12	0	1.092896174863388	12	0	NA	NA	NA	0.5407124681933843	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020739	Chromosome_9A	5870	6	135	34.582623509369675	0.7704580455478813	0.5808580858085809	134	0	0.5304101838755304	54	0	0.6109121550452917	80	0	1.92469794886204	88	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN019389	Chromosome_9A	574	2	18	45.29616724738676	0.6175363098440022	1.4833127317676142	18	0	1.4511873350923483	17	0	1.9607843137254901	1	0	1.2987012987012987	44	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020740	Chromosome_9A	2065	3	62	39.22518159806295	0.7807230972809152	0.6032482598607889	62	0	0.7458048477315102	50	0	0.18315018315018314	12	0	0.5939356048765239	41	0	unmethylated (<10%)	Q9J4Z4	Putative ankyrin repeat protein FPV246	NA	hit, no GO BP
GN020741	Chromosome_9A	11788	5	151	36.49474041398032	0.38690706364468475	74.57019301761417	149	0.7651006711409396	28.353658536585368	19	0.47368421052631576	79.92232552665646	130	0.8076923076923077	0.82467929138668294	59	0	methylated (>=50%)	Q6AZV0	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial (CybS-B) (Malate dehydrogenase [quinone] cytochrome b small subunit) (Succinate dehydrogenase complex subunit D-B) (Succinate-ubiquinone oxidoreductase cytochrome b small subunit B) (Succinate-ubiquinone reductase membrane anchor subunit B)	mitochondrial electron transport, succinate to ubiquinone [GO:0006121]; tricarboxylic acid cycle [GO:0006099]	hit with GO BP
GN020742	Chromosome_9A	324	1	6	50	0.5333333333333333	0.49261083743842365	6	0	0.49261083743842365	6	0	NA	NA	NA	2.619871478002966	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020743	Chromosome_9A	5465	8	137	35.077767612076855	0.8149915203131497	0.3625714684144471	137	0	0.5497251374312844	51	0	0.2901353965183752	86	0	0.8013737836290784	38	0	unmethylated (<10%)	Q708S5	Acid-sensing ion channel 2 (ASIC2) (ZASIC2)	response to steroid hormone [GO:0048545]; sodium ion transmembrane transport [GO:0035725]	hit with GO BP
GN020744	Chromosome_9A	14918	4	148	33.22831478750503	0.3595347386014931	82.16327827191868	125	0.96	92.1311475409836	8	1	81.65581705892171	117	0.9572649572649573	92.52433936022253	49	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020738	Chromosome_9A	303	1	10	56.1056105610561	0.4196094723722476	1.36986301369863	5	0	1.36986301369863	5	0	NA	NA	NA	0.9049773755656109	90	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020737	Chromosome_9A	41727	9	826	36.8346634073861	0.584543339587242	83.88943010228934	690	0.9550724637681159	89.2156862745098	21	1	83.7676249314932	669	0.953662182361734	76.28458498023716	12	0.9166666666666666	methylated (>=50%)	O15484	Calpain-5 (EC 3.4.22.-) (Calpain htra-3) (New calpain 3) (nCL-3)	proteolysis [GO:0006508]; signal transduction [GO:0007165]	hit with GO BP
GN020733	Chromosome_9A	5264	3	124	38.56382978723404	0.6460532254360891	3.1131359149582383	124	0	0.6463527239150508	33	0	3.751493428912784	91	0	0.7175316909830184	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020734	Chromosome_9A	893	3	18	37.51399776035834	0.5792432432432433	1.8181818181818181	18	0	2.112676056338028	14	0	1.1673151750972763	4	0	1.6501650165016502	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020731	Chromosome_9A	40461	11	773	36.15086132324955	0.5850844982605362	60.55634509279385	723	0.6099585062240664	88.80813953488372	24	0.9583333333333334	59.71983129626442	699	0.597997138769671	67.3514306676449	45	0.8222222222222222	methylated (>=50%)	Q96FG2	ELMO domain-containing protein 3 (RNA-binding motif and ELMO domain-containing protein 1) (RNA-binding motif protein 29) (RNA-binding protein 29)	cilium assembly [GO:0060271]	hit with GO BP
GN020730	Chromosome_9A	594	1	26	42.42424242424242	0.9737704918032787	2.742616033755274	24	0	2.742616033755274	24	0	NA	NA	NA	0.851063829787234	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020729	Chromosome_9A	513	1	18	44.05458089668616	0.7361288265306123	0.6578947368421053	18	0	0.6578947368421053	18	0	NA	NA	NA	0.4187604690117253	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012854	Chromosome_9A	398	1	21	59.79899497487437	0.5997416762342136	0.7168458781362007	19	0	0.7168458781362007	19	0	NA	NA	NA	4.411764705882353	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020728	Chromosome_9A	20532	5	228	35.40814338593415	0.35428870349885844	84.4516085700853	225	0.9511111111111111	71.61290322580645	10	0.9	84.86550194120909	215	0.9534883720930233	85.95628415300547	27	0.9629629629629629	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020727	Chromosome_9A	471	1	21	51.167728237791934	0.7586286240220893	0.5434782608695652	19	0	0.5434782608695652	19	0	NA	NA	NA	1.6888888888888889	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020726	Chromosome_9A	3714	6	106	36.07969843834141	0.877380188275567	0.5017561465127948	106	0	0.5473453749315819	34	0	0.4816955684007707	72	0	0.6400409626216078	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020725	Chromosome_9A	942	1	23	38.53503184713376	0.657701414607492	10.4631217838765	23	0	10.4631217838765	23	0	NA	NA	NA	1.265389876880985	53	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020724	Chromosome_9A	1649	2	60	41.600970285021226	0.8420067231181652	0.8381120423467138	60	0	0.8381120423467138	60	0	NA	NA	NA	0.6006006006006006	53	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020723	Chromosome_9A	315	1	15	45.714285714285715	0.9293863099921322	1.152073732718894	15	0	1.152073732718894	15	0	NA	NA	NA	0.9988249118683902	60	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020722	Chromosome_9A	40026	11	557	37.81541997701494	0.3899228102798249	79.9735832442292	466	0.9184549356223176	72.22582738481506	23	0.782608695652174	80.36817926430247	443	0.9255079006772009	0.46349942062572425	58	0	methylated (>=50%)	Q8C9M2	Coiled-coil domain-containing protein 15	cilium assembly [GO:0060271]; positive regulation of centriole elongation [GO:1903724]	hit with GO BP
GN020721	Chromosome_9A	384	1	17	44.270833333333336	0.918918918918919	0.8865248226950354	17	0	0.8865248226950354	17	0	NA	NA	NA	0.7502027575020276	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020720	Chromosome_9A	604	2	18	39.0728476821192	0.8039041703637977	0.8163265306122449	18	0	0.9888751545117429	16	0	0	2	0	0.5109708446047491	56	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN016317	Chromosome_9A	357	1	5	45.65826330532213	0.26955602536997886	0	5	0	0	5	0	NA	NA	NA	0.3502626970227671	25	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020719	Chromosome_9A	1208	4	14	41.14238410596027	0.2765567765567766	4.081632653061225	14	0	3.133159268929504	12	0	10.344827586206897	2	0	1.2060301507537687	21	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN002858	Chromosome_9A	1151	3	22	34.23110338835795	0.6526288659793814	89.84156570363467	22	0.9545454545454546	89.22518159806296	19	0.9473684210526315	91.90283400809717	3	1	91.94270367054611	25	1	methylated (>=50%)	O96006	E3 SUMO-protein ligase ZBED1 (EC 2.3.2.-) (DNA replication-related element-binding factor) (Putative Ac-like transposable element) (Zinc finger BED domain-containing protein 1) (dREF homolog)	host-mediated suppression of viral genome replication [GO:0044828]; positive regulation of transcription by RNA polymerase II [GO:0045944]; protein autosumoylation [GO:1990466]; protein sumoylation [GO:0016925]; regulation of DNA-templated transcription [GO:0006355]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN016078	Chromosome_9A	2671	6	33	33.91988019468364	0.4300644538016033	19.798327594687652	33	0	20.767306088407008	16	0	19.393093826299268	17	0	0.9592326139088729	46	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020714	Chromosome_9A	1062	2	34	44.8210922787194	0.6457658946615399	0.9817671809256662	34	0	0.7662835249042146	23	0	1.5706806282722514	11	0	0.4555198285101822	58	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020717	Chromosome_9A	636	1	23	41.509433962264154	0.8418992805755395	0.2962962962962963	23	0	0.2962962962962963	23	0	NA	NA	NA	0.3796267004112623	61	0	unmethylated (<10%)	Q20929	G protein-coupled receptor dmsr-1 (Dromyosuppressin receptor related 1)	G protein-coupled receptor signaling pathway [GO:0007186]; regulation of cellular response to heat [GO:1900034]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]	hit with GO BP
GN020718	Chromosome_9A	399	1	13	44.11027568922306	0.6698088842975206	0	13	0	0	13	0	NA	NA	NA	1.122334455667789	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020712	Chromosome_9A	2389	2	89	38.71912934282126	0.9947181286549708	0.7374631268436578	14	0	NA	NA	NA	0.7374631268436578	14	0	0.8858267716535433	28	0	unmethylated (<10%)	Q95JJ0	Protein O-mannose kinase (POMK) (EC 2.7.1.183) (Protein kinase-like protein SgK196) (Sugen kinase 196)	carbohydrate phosphorylation [GO:0046835]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN020711	Chromosome_9A	1524	1	52	39.76377952755905	0.8662403672733235	2.898550724637681	26	0	2.898550724637681	26	0	NA	NA	NA	0.14388489208633093	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020710	Chromosome_9A	2388	2	89	38.69346733668342	0.9965162349079827	0.7352941176470589	17	0	NA	NA	NA	0.7352941176470589	17	0	0.6272617611580217	45	0	unmethylated (<10%)	Q95JJ0	Protein O-mannose kinase (POMK) (EC 2.7.1.183) (Protein kinase-like protein SgK196) (Sugen kinase 196)	carbohydrate phosphorylation [GO:0046835]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN001680	Chromosome_9A	422	1	21	43.36492890995261	1.0587813620071684	0.39011703511053314	21	0	0.39011703511053314	21	0	NA	NA	NA	0.6418918918918919	47	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020709	Chromosome_9A	14685	6	184	34.98808307797072	0.40992918130677786	82.98846675712348	184	0.9782608695652174	77.35537190082644	12	1	83.29310807186913	172	0.9767441860465116	90.6765943671091	31	0.967741935483871	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020708	Chromosome_9A	411	1	1	42.33576642335766	0.054654255319148935	40	1	0	40	1	0	NA	NA	NA	78.86758805171645	28	0.8928571428571429	NA	NA	NA	NA	no Swiss-Prot hit
GN020707	Chromosome_9A	363	1	23	48.209366391184574	1.1096491228070176	1.675977653631285	23	0	1.675977653631285	23	0	NA	NA	NA	0.9351432880844646	49	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003771	Chromosome_9A	515	1	5	46.019417475728154	0.192278972520908	0.45662100456621	5	0	0.45662100456621	5	0	NA	NA	NA	0.7395234182415776	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN003772	Chromosome_9A	2159	1	23	37.00787401574803	0.31618592804839224	0.6619385342789598	21	0	0.6619385342789598	21	0	NA	NA	NA	0.7950530035335689	19	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020706	Chromosome_9A	17731	3	464	36.399526253454404	0.7932803225272399	3.161330710069755	430	0	2.8407047824523555	50	0	3.206863095542052	380	0	0.42016806722689076	38	0	unmethylated (<10%)	Q18120	TWiK family of potassium channels protein 18	locomotion [GO:0040011]; muscle contraction [GO:0006936]; potassium ion transport [GO:0006813]	hit with GO BP
GN020705	Chromosome_9A	634	2	16	35.33123028391167	0.8118447378951581	0.27958993476234856	16	0	0.27739251040221913	12	0	0.2840909090909091	4	0	0.5757715338553662	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020704	Chromosome_9A	15623	9	168	34.19957754592588	0.37030467631228087	85.76187971243205	167	0.9580838323353293	68.83435582822086	16	0.8125	87.06448871683504	151	0.9735099337748344	5.27411519777932	23	0	methylated (>=50%)	Q8BZW8	NHL repeat-containing protein 2	NA	hit, no GO BP
GN020703	Chromosome_9A	636	1	15	50.62893081761006	0.3922536079930924	96.18320610687023	14	1	96.18320610687023	14	1	NA	NA	NA	91.33986928104575	25	1	methylated (>=50%)	Q28F51	TAR DNA-binding protein 43 (TDP-43)	regulation of circadian rhythm [GO:0042752]; regulation of gene expression [GO:0010468]; regulation of protein stability [GO:0031647]; RNA splicing [GO:0008380]	hit with GO BP
GN020702	Chromosome_9A	7668	6	200	35.863328116849246	0.8127599496317778	0.5250154416306362	200	0	0.6385696040868455	26	0	0.5150599037061919	174	0	0.39503386004514673	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020701	Chromosome_9A	25397	21	590	35.299444816316885	0.7460755950588487	1.4976411360542063	584	0	0.9467455621301775	83	0	1.5827180349440748	501	0	0.539291217257319	45	0	unmethylated (<10%)	Q8IS64	Endothelin-converting enzyme homolog (ECE) (EC 3.4.24.-)	protein processing [GO:0016485]	hit with GO BP
GN020700	Chromosome_9A	507	2	4	33.92504930966469	0.28827292110874203	2.388059701492537	4	0	2.388059701492537	4	0	NA	NA	NA	0.25839793281653745	11	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020699	Chromosome_9A	705	1	3	44.9645390070922	0.0872093023255814	2.73972602739726	3	0	2.73972602739726	3	0	NA	NA	NA	0.3696236559139785	51	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020696	Chromosome_9A	17448	9	530	38.078862906923426	0.8380795360992358	2.538400853867929	516	0	1.7076845806127574	133	0	2.72670347811237	383	0	1.243781094527363	51	0	unmethylated (<10%)	Q0E908	Hillarin (D-Hillarin) (D-hil)	NA	hit, no GO BP
GN020687	Chromosome_9A	14652	17	131	34.063609063609064	0.30832620110568804	70.4043452021726	130	0.8461538461538461	64.18258034466697	37	0.7297297297297297	72.58064516129032	93	0.8924731182795699	0.5845104724792985	55	0	methylated (>=50%)	Q29RL1	Cilia- and flagella-associated protein 206	axoneme assembly [GO:0035082]; cilium movement [GO:0003341]; regulation of cilium beat frequency [GO:0003356]; regulation of flagellated sperm motility [GO:1901317]; sperm axoneme assembly [GO:0007288]	hit with GO BP
GN020688	Chromosome_9A	15130	11	183	35.465961665565104	0.38548505954587836	85.6689384744655	178	0.9438202247191011	85.22483940042827	16	1	85.71136340390713	162	0.9382716049382716	68.4	14	0.5714285714285714	methylated (>=50%)	Q9H9B4	Sideroflexin-1	L-alanine transport [GO:0015808]; L-serine transport [GO:0015825]; one-carbon metabolic process [GO:0006730]; serine import into mitochondrion [GO:0140300]	hit with GO BP
GN020689	Chromosome_9A	1482	3	17	38.25910931174089	0.31495649564956496	93.57045143638851	17	1	95.05247376311844	15	1	78.125	2	1	94.83914209115281	27	1	methylated (>=50%)	Q504G0	Transmembrane protein 127	negative regulation of cell population proliferation [GO:0008285]; negative regulation of TOR signaling [GO:0032007]; regulation of TOR signaling [GO:0032006]	hit with GO BP
GN020690	Chromosome_9A	5953	3	84	36.90576180077272	0.41615858986842436	87.48236242693005	84	0.9880952380952381	88.31908831908832	9	1	87.41865509761388	75	0.9866666666666667	91.33476856835307	43	1	methylated (>=50%)	Q9H204	Mediator of RNA polymerase II transcription subunit 28 (Endothelial-derived protein 1) (Mediator complex subunit 28) (Merlin and Grb2-interacting cytoskeletal protein) (Magicin) (Tumor angiogenesis marker EG-1)	positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; positive regulation of transcription initiation by RNA polymerase II [GO:0060261]; RNA polymerase II preinitiation complex assembly [GO:0051123]	hit with GO BP
GN020691	Chromosome_9A	25203	11	262	33.984049517914535	0.36094376017260965	81.5095620685753	261	0.946360153256705	88.15575987020011	42	0.9523809523809523	80.73301737756714	219	0.9452054794520548	81.28440366972477	14	0.9285714285714286	methylated (>=50%)	Q28CF8	Ectonucleoside triphosphate diphosphohydrolase 7 (NTPDase 7) (EC 3.6.1.15)	CTP catabolic process [GO:0006254]; CTP metabolic process [GO:0046036]; GTP metabolic process [GO:0046039]; nucleobase-containing small molecule catabolic process [GO:0034656]; UDP catabolic process [GO:0006256]; UTP catabolic process [GO:0046052]	hit with GO BP
GN020692	Chromosome_9A	12390	9	228	34.979822437449556	0.6105664488017429	82.0130279470477	190	0.8	77.73109243697479	19	0.7894736842105263	82.48890964277376	171	0.8011695906432749	29.67032967032967	23	0.34782608695652173	methylated (>=50%)	Q8VC51	Telomerase Cajal body protein 1 (WD repeat-containing protein 79) (WD40 repeat-containing protein antisense to TP53 gene homolog)	Cajal body organization [GO:0030576]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of establishment of protein localization to telomere [GO:1904851]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein localization to Cajal body [GO:1904867]; RNA folding [GO:0034337]; scaRNA localization to Cajal body [GO:0090666]; telomerase RNA localization to Cajal body [GO:0090671]; telomere formation via telomerase [GO:0032203]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN020693	Chromosome_9A	2169	3	20	33.93268787459659	0.32033673017279574	82.32044198895028	20	0.85	37.5	3	0.3333333333333333	89.171974522293	17	0.9411764705882353	78.0940594059406	24	0.7916666666666666	methylated (>=50%)	Q9BUR4	Telomerase Cajal body protein 1 (WD repeat-containing protein 79) (WD40 repeat-containing protein antisense to TP53 gene) (WRAP53beta)	Cajal body organization [GO:0030576]; positive regulation of DNA repair [GO:0045739]; positive regulation of double-strand break repair [GO:2000781]; positive regulation of double-strand break repair via homologous recombination [GO:1905168]; positive regulation of double-strand break repair via nonhomologous end joining [GO:2001034]; positive regulation of establishment of protein localization to telomere [GO:1904851]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein localization to Cajal body [GO:1904867]; RNA folding [GO:0034337]; scaRNA localization to Cajal body [GO:0090666]; telomerase RNA localization to Cajal body [GO:0090671]; telomere formation via telomerase [GO:0032203]; telomere maintenance via telomerase [GO:0007004]	hit with GO BP
GN020694	Chromosome_9A	7401	5	88	34.40075665450615	0.40587466573770153	76.44688054167338	88	0.8068181818181818	63.35149863760218	13	0.6923076923076923	78.20442494057414	75	0.8266666666666667	0.6266126059712496	47	0	methylated (>=50%)	Q3T0S0	Transmembrane protein 128	NA	hit, no GO BP
GN020695	Chromosome_9A	40773	13	747	35.790841978760454	0.572127701108203	84.29823396627273	459	0.9172113289760349	73.67178276269185	21	0.7142857142857143	84.60566314854664	438	0.9269406392694064	28.495161828495164	56	0	methylated (>=50%)	Q58HI1	Proline-, glutamic acid- and leucine-rich protein 1 (Modulator of non-genomic activity of estrogen receptor)	cellular response to estrogen stimulus [GO:0071391]; positive regulation of transcription by RNA polymerase II [GO:0045944]; rRNA processing [GO:0006364]	hit with GO BP
GN020685	Chromosome_9A	306	1	14	46.73202614379085	0.8564574170331867	0.4444444444444444	14	0	0.4444444444444444	14	0	NA	NA	NA	0.2824858757062147	32	0	unmethylated (<10%)	Q7TSC3	Serine/threonine-protein kinase Nek5 (EC 2.7.11.1) (Never in mitosis A-related kinase 5) (NimA-related protein kinase 5)	positive regulation of striated muscle cell differentiation [GO:0051155]	hit with GO BP
GN003253	Chromosome_9A	1296	5	31	38.81172839506173	0.6360786548874323	0.5813953488372093	31	0	0.49968769519050593	26	0	1.0309278350515463	5	0	0.4437400950871632	29	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020679	Chromosome_9A	559	2	23	43.112701252236135	0.8866896551724138	0.5095541401273885	23	0	0.5471956224350205	21	0	0	2	0	0.7544979686593152	72	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020678	Chromosome_9A	2341	2	74	42.588637334472445	0.7032313063245921	74.70511140235911	74	0.7567567567567568	80.14623172103487	70	0.8	0	4	0	1.5891032917139614	29	0	methylated (>=50%)	Q96N64	PWWP domain-containing protein 2A	chromatin remodeling [GO:0006338]; positive regulation of transcription elongation by RNA polymerase II [GO:0032968]; regulation of transcriptional start site selection at RNA polymerase II promoter [GO:0001178]	hit with GO BP
GN020677	Chromosome_9A	3017	4	34	36.52635067948293	0.3382733148661127	59.20554854981084	33	0.696969696969697	63.839811542991754	18	0.7777777777777778	53.86702849389417	15	0.6	74.79564032697547	10	0.8	methylated (>=50%)	Q6DFJ9	Cyclin-J	NA	hit, no GO BP
GN020676	Chromosome_9A	2477	3	21	35.284618490109004	0.27376215738284704	61.07913669064748	21	0.6666666666666666	69.97840172786177	9	0.7777777777777778	56.63430420711974	12	0.5833333333333334	73.63576594345825	32	0.90625	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020675	Chromosome_9A	1536	3	27	40.234375	0.442523768366465	83.44370860927152	27	0.9629629629629629	88.60971524288107	15	1	78.39607201309329	12	0.9166666666666666	83.76916140667268	24	0.9583333333333334	methylated (>=50%)	Q3ZC24	E3 ubiquitin-protein ligase MARCHF5 (EC 2.3.2.27) (Membrane-associated RING finger protein 5) (Membrane-associated RING-CH protein V) (MARCH-V) (RING-type E3 ubiquitin transferase MARCHF5)	negative regulation of cytoplasmic pattern recognition receptor signaling pathway [GO:0039532]; positive regulation of cGAS/STING signaling pathway [GO:0141111]; positive regulation of mitochondrial fission [GO:0090141]; positive regulation of NLRP3 inflammasome complex assembly [GO:1900227]; protein autoubiquitination [GO:0051865]; protein K27-linked ubiquitination [GO:0044314]; protein K48-linked ubiquitination [GO:0070936]; protein K63-linked ubiquitination [GO:0070534]; protein localization to mitochondrion [GO:0070585]; protein polyubiquitination [GO:0000209]; regulation of mitochondrial fission [GO:0090140]	hit with GO BP
GN020674	Chromosome_9A	1395	1	35	45.017921146953405	0.5033712730421873	30.98802395209581	33	0.30303030303030304	30.98802395209581	33	0.30303030303030304	NA	NA	NA	70.75320512820512	22	0.5909090909090909	sparse (10-50%)	Q9NY64	Solute carrier family 2, facilitated glucose transporter member 8 (Glucose transporter type 8) (GLUT-8) (Glucose transporter type X1)	carbohydrate metabolic process [GO:0005975]; D-glucose transmembrane transport [GO:1904659]; dehydroascorbic acid transport [GO:0070837]; fructose transmembrane transport [GO:0015755]; hexose transmembrane transport [GO:0008645]; male meiosis I [GO:0007141]	hit with GO BP
GN020673	Chromosome_9A	6144	4	136	34.749348958333336	0.7361104503961646	87.82107096212451	136	0.9117647058823529	83.92050587172538	21	0.9047619047619048	88.35540155921296	115	0.9130434782608695	6.581287797936677	47	0	methylated (>=50%)	P50532	Structural maintenance of chromosomes protein 4 (SMC protein 4) (SMC-4) (Chromosome assembly protein XCAP-C) (Chromosome-associated protein C)	mitotic chromosome condensation [GO:0007076]	hit with GO BP
GN020672	Chromosome_9A	1869	2	36	38.6302835741038	0.5178839448587989	70.6508875739645	36	0.7777777777777778	91.23649459783914	21	1	50.641773628938154	15	0.4666666666666667	52.319054652880354	42	0.6190476190476191	methylated (>=50%)	Q9JL27	Galactoside alpha-(1,2)-fucosyltransferase 2 (Alpha(1,2)FT 2) (Fucosyltransferase 2) (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2) (GDP-fucose: beta-galactoside alpha1,2-fucosyltransferase) (MFUT-II) (Secretory blood group protein 2) (Type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.69) (Type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2) (EC 2.4.1.344)	glycoprotein biosynthetic process [GO:0009101]; oligosaccharide biosynthetic process [GO:0009312]; protein O-linked glycosylation via fucose [GO:0036066]	hit with GO BP
GN020671	Chromosome_9A	13389	14	195	35.88766898200015	0.4524928872694602	85.6974382493612	195	0.9641025641025641	89.23220973782772	41	0.9512195121951219	85.12226708311114	154	0.9675324675324676	43.07561597281224	43	0.5348837209302325	methylated (>=50%)	Q6P1B1	Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)	bradykinin catabolic process [GO:0010815]; CARD8 inflammasome complex assembly [GO:0140633]; negative regulation of programmed cell death [GO:0043069]; proteolysis [GO:0006508]	hit with GO BP
GN020670	Chromosome_9A	1662	2	15	37.90613718411552	0.3199887047709507	74.45820433436532	15	1	74.45820433436532	15	1	NA	NA	NA	84.92739108662994	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020669	Chromosome_9A	10078	7	69	35.076404048422305	0.2270412694266684	90.28639618138425	69	1	95.10050251256281	15	1	89.15733647613436	54	1	87.4633431085044	37	1	methylated (>=50%)	Q9NQW7	Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Aminoacylproline aminopeptidase) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (X-Pro aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble)	bradykinin catabolic process [GO:0010815]; negative regulation of programmed cell death [GO:0043069]; proteolysis [GO:0006508]	hit with GO BP
GN020668	Chromosome_9A	20284	7	168	35.16071780713863	0.27229554234181974	75.10114012504597	160	0.90625	74.24359968968193	42	0.9761904761904762	75.26208503203262	118	0.8813559322033898	4.25764192139738	49	0	methylated (>=50%)	Q3KP44	Ankyrin repeat domain-containing protein 55	NA	hit, no GO BP
GN020657	Chromosome_9A	7199	7	58	35.532712876788445	0.25635182052879907	90.24122807017544	57	0.9824561403508771	92.25199131064446	30	1	88.19188191881919	27	0.9629629629629629	69.80263157894737	30	0.8	methylated (>=50%)	Q8NB25	Protein FAM184A	NA	hit, no GO BP
GN020652	Chromosome_9A	23599	8	356	34.535361667867285	0.5060409938522714	73.22563789950361	348	0.8793103448275862	63.20266272189349	41	0.8048780487804879	74.56322179449215	307	0.8892508143322475	24.970760233918128	39	0.2564102564102564	methylated (>=50%)	Q99JL1	Sperm flagella and cilia-associated protein 1 (Calponin-homology and microtubule-associated protein)	axonemal central apparatus assembly [GO:1904158]; cell migration [GO:0016477]; cilium movement [GO:0003341]; filopodium assembly [GO:0046847]; lamellipodium assembly [GO:0030032]; microtubule bundle formation [GO:0001578]; negative regulation of microtubule depolymerization [GO:0007026]; regulation of cytoskeleton organization [GO:0051493]; regulation of Wnt signaling pathway, planar cell polarity pathway [GO:2000095]	hit with GO BP
GN012825	Chromosome_9A	626	1	18	42.97124600638978	0.6302013422818792	0.533175355450237	18	0	0.533175355450237	18	0	NA	NA	NA	1.3797634691195795	44	0	unmethylated (<10%)	O88582	Suppressor of cytokine signaling 2 (SOCS-2) (Cytokine-inducible SH2 protein 2)	cellular response to hormone stimulus [GO:0032870]; cytokine-mediated signaling pathway [GO:0019221]; growth hormone receptor signaling pathway [GO:0060396]; intracellular signal transduction [GO:0035556]; lactation [GO:0007595]; mammary gland alveolus development [GO:0060749]; negative regulation of growth hormone receptor signaling pathway [GO:0060400]; negative regulation of multicellular organism growth [GO:0040015]; negative regulation of receptor signaling pathway via JAK-STAT [GO:0046426]; negative regulation of signal transduction [GO:0009968]; positive regulation of neuron differentiation [GO:0045666]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein ubiquitination [GO:0016567]; regulation of multicellular organism growth [GO:0040014]; response to estradiol [GO:0032355]; response to peptide hormone [GO:0043434]	hit with GO BP
GN020653	Chromosome_9A	15573	17	148	35.46522827971489	0.3022931640522533	68.97928150541722	148	0.7972972972972973	54.29262394195889	26	0.5384615384615384	71.71853856562923	122	0.8524590163934426	54.77726574500768	64	0.453125	methylated (>=50%)	Q0IH24	Sperm flagella and cilia-associated protein 1	axonemal central apparatus assembly [GO:1904158]; cell migration [GO:0016477]; cilium movement [GO:0003341]; filopodium assembly [GO:0046847]; lamellipodium assembly [GO:0030032]; microtubule bundle formation [GO:0001578]; negative regulation of microtubule depolymerization [GO:0007026]; regulation of cytoskeleton organization [GO:0051493]; regulation of Wnt signaling pathway, planar cell polarity pathway [GO:2000095]	hit with GO BP
GN020654	Chromosome_9A	5975	13	150	38.87866108786611	0.6643849629945915	1.220070154033857	150	0	0.9572431397574984	70	0	1.4607069821793748	80	0	0.8333333333333334	51	0	unmethylated (<10%)	B0JZG0	Solute carrier family 23 member 2 (Na(+)/L-ascorbic acid transporter 2) (Sodium-dependent vitamin C transporter 2)	L-ascorbic acid transmembrane transport [GO:0015882]	hit with GO BP
GN020656	Chromosome_9A	5192	3	114	35.05392912172573	0.7161379310344828	0.5738880918220947	114	0	0.46674445740956827	64	0	0.6655574043261231	50	0	0.7071082992184593	53	0	unmethylated (<10%)	Q5TF39	Solute carrier family 60 member 2 (Major facilitator superfamily domain-containing protein 4B) (Sodium-dependent glucose transporter 1)	D-glucose import across plasma membrane [GO:0098708]	hit with GO BP
GN020650	Chromosome_9A	955	1	38	40.83769633507853	0.9580000527969167	0.5937234944868532	38	0	0.5937234944868532	38	0	NA	NA	NA	0.4567307692307692	53	0	unmethylated (<10%)	Q9R0W9	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to nicotine [GO:0035094]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020647	Chromosome_9A	663	1	30	46.15384615384615	0.8579192546583851	0.6644518272425249	30	0	0.6644518272425249	30	0	NA	NA	NA	0.5542085209560097	75	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020636	Chromosome_9A	3313	3	79	36.67370962873529	0.709641121860223	1.1442193087008343	79	0	0.6896551724137931	10	0	1.263157894736842	69	0	0.3961267605633803	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020637	Chromosome_9A	309	1	8	45.954692556634306	0.49076831447290054	0.398406374501992	8	0	0.398406374501992	8	0	NA	NA	NA	0.5796370967741935	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020638	Chromosome_9A	702	1	17	38.888888888888886	0.6459190300930937	0.5451241671714112	10	0	0.5451241671714112	10	0	NA	NA	NA	0.49408399427902744	34	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020639	Chromosome_9A	612	1	13	38.72549019607843	0.575187969924812	1.0180995475113122	9	0	1.0180995475113122	9	0	NA	NA	NA	0.6697282816685802	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020640	Chromosome_9A	921	1	27	38.54505971769815	0.7938641297407738	0.944386149003148	6	0	0.944386149003148	6	0	NA	NA	NA	0.7746790615316512	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020641	Chromosome_9A	5247	5	47	37.5833809796074	0.25509868421052634	90.4494382022472	47	1	93.10344827586206	23	1	88.96672504378283	24	1	83.64928909952607	8	1	methylated (>=50%)	Q6PHN7	Transmembrane protein 164 (Arachidonoyl ether phospholipid synthase)	positive regulation of ferroptosis [GO:0160020]	hit with GO BP
GN020642	Chromosome_9A	18277	6	371	36.71280844777589	0.6025355524630476	83.70298446443172	360	0.9166666666666666	49.45054945054945	17	0.5294117647058824	85.02653927813164	343	0.9358600583090378	29.512032085561497	51	0.37254901960784315	methylated (>=50%)	P54106	Methylosome subunit pICln (Chloride conductance regulatory protein ICln) (I(Cln))	cell volume homeostasis [GO:0006884]; chloride transport [GO:0006821]; mRNA cis splicing, via spliceosome [GO:0045292]; spliceosomal snRNP assembly [GO:0000387]	hit with GO BP
GN020643	Chromosome_9A	920	2	16	36.630434782608695	0.5208775654635527	59.97942386831276	15	0.8	59.97942386831276	15	0.8	NA	NA	NA	91.72881355932203	42	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020644	Chromosome_9A	279	1	8	46.95340501792115	0.5227166276346604	10.1010101010101	7	0	10.1010101010101	7	0	NA	NA	NA	0.7059342598720494	72	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN010872	Chromosome_9A	517	1	19	44.680851063829785	0.7366881655917205	13.539651837524177	19	0	13.539651837524177	19	0	NA	NA	NA	1.5421521590130227	64	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020645	Chromosome_9A	456	1	12	41.00877192982456	0.6273790415042422	26.16906474820144	11	0	26.16906474820144	11	0	NA	NA	NA	1.3510568751361953	55	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020646	Chromosome_9A	576	1	8	38.36805555555556	0.38951817413355877	1.2552301255230125	8	0	1.2552301255230125	8	0	NA	NA	NA	1.4070994563479373	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN012054	Chromosome_9A	2063	3	27	44.11051866214251	0.26905576165082307	NA	0	NA	NA	NA	NA	NA	NA	NA	0.8397225264695144	50	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020618	Chromosome_9A	392	2	1	41.58163265306123	0.059018367961457395	0	1	0	NA	NA	NA	0	1	0	2.3784355179704018	53	0	NA	NA	NA	NA	no Swiss-Prot hit
GN000982	Chromosome_9A	1071	1	20	42.016806722689076	0.4935483870967742	0.9735744089012517	20	0	0.9735744089012517	20	0	NA	NA	NA	0.6644518272425249	29	0	unmethylated (<10%)	Q9FGH2	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 (Protein ORGAN BOUNDARY 5)	mRNA transcription [GO:0009299]; post-embryonic plant morphogenesis [GO:0090698]	hit with GO BP
GN020619	Chromosome_9A	285	1	9	45.26315789473684	0.6447963800904978	NA	0	NA	NA	NA	NA	NA	NA	NA	1.9646365422396856	42	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020620	Chromosome_9A	738	1	15	40.24390243902439	0.5032733224222586	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN016304	Chromosome_9A	5714	3	159	40.75953797689885	0.674228796352367	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN011961	Chromosome_9A	305	1	5	40	0.4126082251082251	NA	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	no Swiss-Prot hit
GN020621	Chromosome_9A	282	1	7	41.843971631205676	0.6120930232558139	75.86206896551724	7	1	75.86206896551724	7	1	NA	NA	NA	81.10497237569061	32	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020622	Chromosome_9A	30578	8	371	36.791157041009875	0.3586558940847584	81.40278729723555	321	0.9034267912772586	90.8373786407767	28	0.9285714285714286	80.42244640605297	293	0.9010238907849829	3.852526926263463	52	0	methylated (>=50%)	C3Y431	DDRGK domain-containing protein 1	cartilage development [GO:0051216]; protein K69-linked ufmylation [GO:1990592]	hit with GO BP
GN020623	Chromosome_9A	17935	8	309	36.208530805687204	0.5279200848952716	83.91950578017004	282	0.9326241134751773	94.77572559366754	35	1	82.49619482496195	247	0.9230769230769231	84.22110552763819	25	0.92	methylated (>=50%)	Q8R3C1	Uncharacterized protein C2orf42 homolog	NA	hit, no GO BP
GN020624	Chromosome_9A	48694	17	593	36.05988417464164	0.38482174258673985	81.61441925321489	575	0.9339130434782609	88.2480957562568	37	0.972972972972973	81.28388635870743	538	0.9312267657992565	87.75456919060052	68	1	methylated (>=50%)	Q08D86	Glycerol kinase 5 (GK 5) (Glycerokinase 5) (EC 2.7.1.30) (ATP:glycerol 3-phosphotransferase 5)	glycerol catabolic process [GO:0019563]; glycerol-3-phosphate biosynthetic process [GO:0046167]; triglyceride metabolic process [GO:0006641]	hit with GO BP
GN020625	Chromosome_9A	8693	8	87	36.36259059012999	0.30364962038327037	81.54276392449313	84	0.9404761904761905	66.18521665250637	23	0.8695652173913043	87.34746307000643	61	0.9672131147540983	61.761569631051394	59	0.6271186440677966	methylated (>=50%)	Q8BMB3	Eukaryotic translation initiation factor 4E type 2 (eIF-4E type 2) (eIF4E type 2) (eIF4E-2) (mRNA cap-binding protein type 2) (Eukaryotic translation initiation factor 4E-like 3) (eIF4E-like protein 4E-LP)	in utero embryonic development [GO:0001701]; miRNA-mediated gene silencing by inhibition of translation [GO:0035278]; negative regulation of translation [GO:0017148]; negative regulation of translational initiation [GO:0045947]; negative regulation of type I interferon-mediated signaling pathway [GO:0060339]; rescue of stalled cytosolic ribosome [GO:0072344]; translational initiation [GO:0006413]; type I interferon-mediated signaling pathway [GO:0060337]	hit with GO BP
GN020626	Chromosome_9A	5047	5	92	36.21953635823262	0.5559627908536097	90.3084366495313	92	0.9565217391304348	88.14898419864559	15	0.9333333333333333	90.64245810055866	77	0.961038961038961	83.52941176470588	50	0.82	methylated (>=50%)	Q7QH62	Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4)	regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN020627	Chromosome_9A	11766	6	167	34.82916879143294	0.4680238866008136	74.76654694715239	166	0.7590361445783133	69.50819672131148	21	0.6666666666666666	75.3114382785957	145	0.7724137931034483	49.29101958136394	28	0.42857142857142855	methylated (>=50%)	Q2FTH0	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (BPG-dependent PGAM) (PGAM) (Phosphoglyceromutase) (dPGM) (EC 5.4.2.11)	gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]	hit with GO BP
GN020628	Chromosome_9A	615	1	21	43.41463414634146	0.7903916768665851	1.3793103448275863	21	0	1.3793103448275863	21	0	NA	NA	NA	0.8942258559018906	62	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020629	Chromosome_9A	1047	1	37	41.54727793696275	0.8294223440243224	0.7942811755361397	37	0	0.7942811755361397	37	0	NA	NA	NA	0.5684125050751117	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020630	Chromosome_9A	909	2	29	43.67436743674367	0.6898618235109389	0.8284023668639053	29	0	0.8284023668639053	29	0	NA	NA	NA	0.7411982705373688	63	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020631	Chromosome_9A	3632	3	65	32.02092511013216	0.7468758897782277	83.09352517985612	65	0.9692307692307692	71.07142857142857	5	1	83.59820089955022	60	0.9666666666666667	4.782608695652174	35	0.05714285714285714	methylated (>=50%)	Q5R596	Polyadenylate-binding protein-interacting protein 2 (PABP-interacting protein 2) (PAIP-2) (Poly(A)-binding protein-interacting protein 2)	negative regulation of translational initiation [GO:0045947]	hit with GO BP
GN020616	Chromosome_9A	28012	17	265	39.67942310438384	0.24315335027908075	80.85704720455307	248	0.8951612903225806	94.3956503554998	86	1	74.48044912833645	162	0.8395061728395061	87.3320537428023	12	0.9166666666666666	methylated (>=50%)	Q8C9S4	Coiled-coil domain-containing protein 186 (Oocyte-testis gene 1 protein)	glucose homeostasis [GO:0042593]; insulin secretion involved in cellular response to glucose stimulus [GO:0035773]; response to bacterium [GO:0009617]; vesicle cytoskeletal trafficking [GO:0099518]	hit with GO BP
GN020615	Chromosome_9A	1432	2	62	42.737430167597765	0.9518520503886357	0.8430349257326375	62	0	0.8795074758135444	41	0	0.8124076809453471	21	0	0.37825059101654845	37	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020614	Chromosome_9A	8573	10	136	36.2766826081885	0.4846964079117648	55.538382277176716	134	0.5970149253731343	74.59605026929982	42	0.7619047619047619	47.86849710982659	92	0.5217391304347826	84.02061855670104	6	1	methylated (>=50%)	Q96LI9	Uncharacterized protein CXorf58	NA	hit, no GO BP
GN020613	Chromosome_9A	13989	10	227	39.888483808706845	0.41717750225798506	86.39381460626943	227	0.9691629955947136	95.14563106796116	12	1	85.99789177793394	215	0.9674418604651163	25.508932280847528	47	0.3191489361702128	methylated (>=50%)	B0BNE5	S-formylglutathione hydrolase (FGH) (EC 3.1.2.12) (Esterase D)	formaldehyde catabolic process [GO:0046294]	hit with GO BP
GN020612	Chromosome_9A	19570	14	229	35.31936637710782	0.375425183032688	89.70771575010389	228	0.9868421052631579	92.21861973135711	38	1	89.26622689144067	190	0.9842105263157894	66.84210526315789	2	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020611	Chromosome_9A	9793	6	253	38.27223527009088	0.7055652315557338	91.25524362697644	236	0.9322033898305084	67.37247353224254	25	0.48	93.4401690587303	211	0.985781990521327	39.41404090657822	42	0.5476190476190477	methylated (>=50%)	Q3T0H0	Leucine carboxyl methyltransferase 1 (EC 2.1.1.233) ([Phosphatase 2A protein]-leucine-carboxy methyltransferase 1)	regulation of mitotic cell cycle spindle assembly checkpoint [GO:0090266]	hit with GO BP
GN020610	Chromosome_9A	7977	6	171	35.38924407672057	0.6858771555798696	93.29241939666349	171	1	94.14182939362796	14	1	93.21442053605134	157	1	97.06621961441743	33	1	methylated (>=50%)	Q5ZK28	DNA polymerase delta subunit 3 (DNA polymerase delta subunit p66)	DNA biosynthetic process [GO:0071897]; DNA replication [GO:0006260]	hit with GO BP
GN020605	Chromosome_9A	33501	15	438	35.440733112444406	0.4165662542860501	81.2536844173708	427	0.8946135831381733	87.30834752981261	57	0.8947368421052632	80.63817811837035	370	0.8945945945945946	31.56996587030717	17	0.29411764705882354	methylated (>=50%)	Q9ES28	Rho guanine nucleotide exchange factor 7 (Beta-Pix) (PAK-interacting exchange factor beta) (p85SPR)	astrocyte cell migration [GO:0043615]; Golgi organization [GO:0007030]; hematopoietic progenitor cell differentiation [GO:0002244]; lamellipodium assembly [GO:0030032]; negative regulation of microtubule nucleation [GO:1905833]; positive regulation of apoptotic process [GO:0043065]; positive regulation of growth hormone secretion [GO:0060124]; positive regulation of GTPase activity [GO:0043547]; postsynaptic actin cytoskeleton organization [GO:0098974]; presynaptic actin cytoskeleton organization [GO:0099140]; Rho protein signal transduction [GO:0007266]; small GTPase-mediated signal transduction [GO:0007264]	hit with GO BP
GN020606	Chromosome_9A	2163	2	70	43.689320388349515	0.6812169312169312	0.4646840148698885	61	0	0.5855562784645413	43	0	0.16260162601626016	18	0	0.5162622612287042	41	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN020607	Chromosome_9A	7883	6	132	35.126220981859696	0.5451276436351064	88.51627137341423	132	0.9848484848484849	92.72943980929678	13	1	88.08655482616095	119	0.9831932773109243	11.694706606483381	47	0.10638297872340426	methylated (>=50%)	P91454	Mitochondrial import inner membrane translocase subunit TIM14 (DnaJ homolog subfamily C member 21)	protein import into mitochondrial matrix [GO:0030150]	hit with GO BP
GN020604	Chromosome_9A	300	1	7	43.333333333333336	0.4981024667931689	90.8256880733945	7	1	90.8256880733945	7	1	NA	NA	NA	88.51540616246498	31	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020594	Chromosome_9A	1010	3	11	37.32673267326733	0.3255582253999883	93.70967741935483	11	1	93.38103756708408	10	1	96.72131147540983	1	1	93.46153846153847	8	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020595	Chromosome_9A	30940	12	400	34.39883645765999	0.4382748205520294	69.29320388349515	400	0.8275	74.54659161976235	70	0.8857142857142857	68.54824405817666	330	0.8151515151515152	34.455755677368835	29	0.4482758620689655	methylated (>=50%)	Q8BM75	AT-rich interactive domain-containing protein 5B (ARID domain-containing protein 5B) (Developmentally and sexually retarded with transient immune abnormalities protein) (Desrt) (MRF1-like) (Modulator recognition factor protein 2) (MRF-2)	adipose tissue development [GO:0060612]; adrenal gland development [GO:0030325]; cell development [GO:0048468]; cellular response to leukemia inhibitory factor [GO:1990830]; face morphogenesis [GO:0060325]; fat cell differentiation [GO:0045444]; fat pad development [GO:0060613]; female gonad development [GO:0008585]; fibroblast migration [GO:0010761]; kidney development [GO:0001822]; male gonad development [GO:0008584]; multicellular organism growth [GO:0035264]; muscle organ morphogenesis [GO:0048644]; negative regulation of transcription by RNA polymerase II [GO:0000122]; platelet-derived growth factor receptor signaling pathway [GO:0048008]; post-embryonic development [GO:0009791]; regulation of transcription by RNA polymerase II [GO:0006357]; roof of mouth development [GO:0060021]; skeletal system morphogenesis [GO:0048705]; transcription initiation-coupled chromatin remodeling [GO:0045815]	hit with GO BP
GN020586	Chromosome_9A	19606	5	369	36.49903090890544	0.5651493374510584	81.2000912616929	363	0.837465564738292	43.40044742729307	37	0.4594594594594595	82.80766852195424	326	0.8803680981595092	0.6193078324225865	47	0	methylated (>=50%)	Q812E0	Cytoplasmic polyadenylation element-binding protein 2 (CPE-BP2) (CPE-binding protein 2) (mCPEB-2)	cellular response to hypoxia [GO:0071456]; cellular response to insulin stimulus [GO:0032869]; negative regulation of cytoplasmic translation [GO:2000766]; negative regulation of cytoplasmic translational elongation [GO:1900248]; negative regulation of translational elongation [GO:0045900]; regulation of translation at synapse, modulating synaptic transmission [GO:0099547]	hit with GO BP
GN020587	Chromosome_9A	26072	14	436	35.727984044185334	0.5243080612986174	88.97574984045947	408	0.9558823529411765	92.07658321060383	78	0.9615384615384616	88.49010471928773	330	0.9545454545454546	59.76253298153034	29	0.6206896551724138	methylated (>=50%)	Q8VIJ5	Protein O-GlcNAcase (OGA) (EC 3.2.1.169) (Beta-N-acetylhexosaminidase) (Beta-hexosaminidase) (Bifunctional protein NCOAT) (Meningioma-expressed antigen 5) (N-acetyl-beta-D-glucosaminidase) (N-acetyl-beta-glucosaminidase)	dATP metabolic process [GO:0046060]; glycoprotein metabolic process [GO:0009100]; N-acetylglucosamine metabolic process [GO:0006044]; negative regulation of cardiac muscle adaptation [GO:0010616]; positive regulation of apoptotic process [GO:0043065]; positive regulation of calcium ion transport [GO:0051928]; positive regulation of calcium ion transport into cytosol [GO:0010524]; positive regulation of cell killing [GO:0031343]; positive regulation of D-glucose import across plasma membrane [GO:0046326]; positive regulation of DNA metabolic process [GO:0051054]; positive regulation of growth hormone secretion [GO:0060124]; positive regulation of insulin secretion [GO:0032024]; positive regulation of mitochondrial depolarization [GO:0051901]; positive regulation of protein-containing complex disassembly [GO:0043243]; positive regulation of proteolysis [GO:0045862]; protein deglycosylation [GO:0006517]; protein targeting to membrane [GO:0006612]; response to steroid hormone [GO:0048545]	hit with GO BP
GN020588	Chromosome_9A	7951	5	250	39.630235190542074	0.8009243216671637	0.823937554206418	244	0	0.7100149476831091	82	0	0.870494807574832	162	0	0.5792304509722797	59	0	unmethylated (<10%)	Q6P2X9	Monocarboxylate transporter 12 (MCT 12) (Solute carrier family 16 member 12)	creatine transmembrane transport [GO:0015881]; creatinine metabolic process [GO:0046449]	hit with GO BP
GN020579	Chromosome_9A	24901	16	628	35.85398176780049	0.7918542328082114	0.6111094220303427	628	0	0.740885162799766	124	0	0.5871334918233556	504	0	0.40310077519379844	52	0	unmethylated (<10%)	Q9H5P4	PDZ domain-containing protein 7	auditory receptor cell development [GO:0060117]; auditory receptor cell stereocilium organization [GO:0060088]; detection of mechanical stimulus involved in sensory perception of sound [GO:0050910]; establishment of protein localization [GO:0045184]; inner ear receptor cell differentiation [GO:0060113]; sensory perception of sound [GO:0007605]	hit with GO BP
GN020574	Chromosome_9A	1651	4	24	40.218049666868566	0.3606673766418175	64.20323325635104	19	0.7894736842105263	67.33590733590734	16	0.8125	54.91990846681922	3	0.6666666666666666	67.31123388581952	26	0.9230769230769231	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020575	Chromosome_9A	2589	2	91	40.82657396678254	0.845465115444517	0.8010335917312662	91	0	0.9287925696594427	34	0	0.7370054305663305	57	0	0.42656916514320536	46	0	unmethylated (<10%)	Q5ZJI0	Protein-tyrosine sulfotransferase 2 (EC 2.8.2.20) (Tyrosylprotein sulfotransferase 2) (TPST-2)	peptidyl-tyrosine sulfation [GO:0006478]	hit with GO BP
GN020578	Chromosome_9A	16446	8	182	33.66168065183023	0.3981645840383621	81.2124248496994	181	0.9116022099447514	79.38885560215698	30	0.8666666666666667	81.50771320461823	151	0.9205298013245033	66.72879776328053	20	0.65	methylated (>=50%)	Q80W32	Dynein regulatory complex protein 9 (IQ domain-containing protein G)	cilium organization [GO:0044782]; sperm axoneme assembly [GO:0007288]; spermatid development [GO:0007286]	hit with GO BP
GN011241	Chromosome_9A	282	1	6	41.13475177304964	0.5390251672507168	0	6	0	0	6	0	NA	NA	NA	1.2280701754385965	27	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020573	Chromosome_9A	5999	4	182	36.489414902483745	0.9269127979434727	0.46160302140159465	177	0	0.5535055350553506	64	0	0.44270174550973945	113	0	1.8049695264885137	57	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020572	Chromosome_9A	18839	19	198	34.96470088645894	0.34630379672093525	74.83886181418016	198	0.8535353535353535	84.59343794579172	68	0.9705882352941176	71.12943474015407	130	0.7923076923076923	87.70370370370371	52	0.9807692307692307	methylated (>=50%)	D6REC4	Cilia- and flagella-associated protein 99	NA	hit, no GO BP
GN020571	Chromosome_9A	727	3	5	39.0646492434663	0.19497934881725043	0	5	0	0	5	0	NA	NA	NA	0.39087947882736157	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020570	Chromosome_9A	10922	24	120	37.712873100164806	0.3090687424686543	87.19066147859922	115	0.9826086956521739	94.19279907084785	23	1	86.10711718188354	92	0.9782608695652174	81.41840366039655	41	0.9512195121951219	methylated (>=50%)	Q9WU60	Attractin (Protein mahogany)	cerebellum development [GO:0021549]; myelination [GO:0042552]; pigmentation [GO:0043473]; regulation of multicellular organism growth [GO:0040014]; response to oxidative stress [GO:0006979]	hit with GO BP
GN020558	Chromosome_9A	535	2	17	41.12149532710281	0.7526481297583582	0.6561679790026247	16	0	0.6206896551724138	15	0	1.3513513513513513	1	0	0.6297646668876368	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020559	Chromosome_9A	8583	4	88	37.13153908889666	0.2985023190815994	77.87653134758588	88	0.8863636363636364	86.17795187465025	38	0.9473684210526315	71.63299663299664	50	0.84	79.7872340425532	44	0.9318181818181818	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020560	Chromosome_9A	7864	6	158	36.991353001017295	0.5892597830406744	85.89528795811518	158	0.9177215189873418	85.39267015706807	37	0.8648648648648649	86.02094240837697	121	0.9338842975206612	64.12478336221837	43	0.5813953488372093	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020561	Chromosome_9A	11260	6	205	36.714031971580816	0.5403434011881796	82.400240474938	203	0.896551724137931	70.31847133757962	50	0.76	84.9981738495252	153	0.9411764705882353	68.3883495145631	55	0.7818181818181819	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020562	Chromosome_9A	1518	1	18	41.30434782608695	0.28454793493428865	1.78359096313912	18	0	1.78359096313912	18	0	NA	NA	NA	1.606805293005671	22	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020565	Chromosome_9A	1004	1	13	41.33466135458168	0.31076190476190474	2.200303490136571	13	0	2.200303490136571	13	0	NA	NA	NA	14.413177762525738	17	0.23529411764705882	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020564	Chromosome_9A	1112	1	6	40.55755395683453	0.13652547575199508	1.4792899408284024	6	0	1.4792899408284024	6	0	NA	NA	NA	88.75119161105815	35	1	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020567	Chromosome_9A	6953	6	71	34.316122537034374	0.352057160624836	74.60381143430291	71	0.8309859154929577	81.24306326304107	16	0.9375	73.13907933398629	55	0.8	4.647785039941903	51	0	methylated (>=50%)	Q5BKM3	Charged multivesicular body protein 3 (Chromatin-modifying protein 3) (Vacuolar protein-sorting-associated protein 24)	late endosome to vacuole transport [GO:0045324]	hit with GO BP
GN020568	Chromosome_9A	2718	2	76	39.10963944076527	0.7312503982498247	0.5519144532597448	76	0	0.6547619047619048	46	0	0.41017227235438886	30	0	0.5723204994797086	54	0	unmethylated (<10%)	Q15825	Neuronal acetylcholine receptor subunit alpha-6	acetylcholine receptor signaling pathway [GO:0095500]; behavioral response to nicotine [GO:0035095]; calcium ion transport [GO:0006816]; chemical synaptic transmission [GO:0007268]; membrane depolarization [GO:0051899]; monoatomic ion transmembrane transport [GO:0034220]; neuromuscular synaptic transmission [GO:0007274]; presynaptic modulation of chemical synaptic transmission [GO:0099171]; regulation of dopamine secretion [GO:0014059]; response to acetylcholine [GO:1905144]; response to nicotine [GO:0035094]; signal transduction [GO:0007165]; synaptic transmission, cholinergic [GO:0007271]	hit with GO BP
GN020569	Chromosome_9A	4569	4	82	35.58765594221931	0.5671746630556384	85.83294154521235	82	0.975609756097561	95.14767932489451	9	1	85.0854917894024	73	0.9726027397260274	4.4363636363636365	45	0.06666666666666667	methylated (>=50%)	Q3T0I5	Mitochondrial fission 1 protein (Fis1 homolog)	mitochondrial fission [GO:0000266]	hit with GO BP
GN020553	Chromosome_9A	7910	4	119	36.32111251580278	0.456886768733139	77.91941391941391	119	0.865546218487395	71.1835334476844	12	0.75	78.54854213393143	107	0.8785046728971962	10.395010395010395	29	0.034482758620689655	methylated (>=50%)	Q9CQ66	Dynein light chain Tctex-type protein 2B (Tctex1 domain-containing protein 2)	cilium assembly [GO:0060271]; intraciliary retrograde transport [GO:0035721]; microtubule-based movement [GO:0007018]; regulation of cilium assembly [GO:1902017]; regulation of intraciliary retrograde transport [GO:1905799]	hit with GO BP
GN020554	Chromosome_9A	7758	7	215	36.65893271461717	0.8301187220520426	0.9539410291000193	214	0	0.8032128514056225	37	0	0.9792886087348042	177	0	1.9222367846221058	40	0	unmethylated (<10%)	P07290	Myosin, essential light chain, adductor muscle (Sulfhydryl light chain) (SHLC)	NA	hit, no GO BP
GN020555	Chromosome_9A	30951	32	575	37.2104293883881	0.5366915207213456	93.66632337796086	551	0.9891107078039928	95.41255176807901	118	0.9915254237288136	93.28405049166608	433	0.9884526558891455	8.707557502738226	23	0.13043478260869565	methylated (>=50%)	Q8WVM7	Cohesin subunit SA-1 (SCC3 homolog 1) (Stromal antigen 1)	establishment of mitotic sister chromatid cohesion [GO:0034087]; mitotic spindle assembly [GO:0090307]	hit with GO BP
GN020552	Chromosome_9A	4480	6	42	34.799107142857146	0.31371084449838943	92.14005001786353	42	1	93.24618736383442	20	1	91.06891701828411	22	1	22.228879568603954	32	0.1875	methylated (>=50%)	Q6NUB2	Protein CWC15 homolog A	mRNA cis splicing, via spliceosome [GO:0045292]; mRNA splicing, via spliceosome [GO:0000398]	hit with GO BP
GN020557	Chromosome_9A	1456	3	21	34.27197802197802	0.5051546391752577	33.85982230997038	21	0.2857142857142857	20.82717872968981	17	0.17647058823529413	60.11904761904762	4	0.75	54.6569741026806	40	0.625	sparse (10-50%)	Q6NY77	4-hydroxy-2-oxoglutarate aldolase, mitochondrial (EC 4.1.3.16) (Dihydrodipicolinate synthase-like) (DHDPS-like protein) (Probable 2-keto-4-hydroxyglutarate aldolase) (Probable KHG-aldolase)	glyoxylate catabolic process [GO:0009436]	hit with GO BP
GN020550	Chromosome_9A	920	2	22	42.82608695652174	0.5874669840071982	0.6138735420503376	22	0	0.5997001499250375	17	0	0.6779661016949152	5	0	1.3944223107569722	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020542	Chromosome_9A	3210	6	80	36.137071651090345	0.765707742951195	0.4241544815269561	80	0	0.5114217524718718	27	0	0.3816793893129771	53	0	0.45574478292156395	55	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020544	Chromosome_9A	10493	2	252	33.174497283903555	0.8730084209400313	1.4381035268763729	246	0	0.48661800486618007	10	0	1.4716608744154116	236	0	0.24644549763033174	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020543	Chromosome_9A	2633	3	62	36.0425370300038	0.7252863451781161	0.4810583283223091	61	0	0.3875968992248062	23	0	0.5231037489102005	38	0	0.8346374543557642	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020549	Chromosome_9A	657	2	23	36.68188736681888	1.042857142857143	0.35561877667140823	23	0	0.3618817852834741	17	0	0.3466204506065858	6	0	0.4802364240857037	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020545	Chromosome_9A	2637	5	61	36.177474402730375	0.7073497854077253	0.436046511627907	61	0	0.22975301550832855	25	0	0.5167378117277016	36	0	0.7123775601068566	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020541	Chromosome_9A	1687	4	35	34.79549496147006	0.6855971760990223	0.15473887814313347	35	0	0	15	0	0.23255813953488372	20	0	0.6975789905621665	66	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020434	Chromosome_9A	299	1	7	41.47157190635451	0.5446265938069217	0	7	0	0	7	0	NA	NA	NA	0.6687472135532768	40	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020540	Chromosome_9A	6500	4	147	33.55384615384615	0.804828126447722	25.383465743726894	147	0.1360544217687075	53.46534653465346	21	0.8571428571428571	23.220942053541172	126	0.015873015873015872	94.71403812824957	18	1	sparse (10-50%)	Q8BH74	Nuclear pore complex protein Nup107 (107 kDa nucleoporin) (Nucleoporin Nup107)	female gonad development [GO:0008585]; mRNA export from nucleus [GO:0006406]; nephron development [GO:0072006]; nuclear pore complex assembly [GO:0051292]; nucleocytoplasmic transport [GO:0006913]; post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery [GO:0000973]; protein import into nucleus [GO:0006606]	hit with GO BP
GN020539	Chromosome_9A	1291	4	46	40.123934934159564	0.8854991426228286	1.3973268529769138	46	0	2.0856201975850714	31	0	0.54421768707483	15	0	1.6691394658753709	55	0	unmethylated (<10%)	Q5UBV8	Tumor necrosis factor ligand superfamily member 15 (TNF ligand-related molecule 1) (Vascular endothelial cell growth inhibitor)	cell surface receptor signaling pathway [GO:0007166]; immune response [GO:0006955]; positive regulation of canonical NF-kappaB signal transduction [GO:0043123]; positive regulation of extrinsic apoptotic signaling pathway [GO:2001238]	hit with GO BP
GN015969	Chromosome_9A	1133	1	37	40.51191526919682	0.8453518854607783	1.0101010101010102	37	0	1.0101010101010102	37	0	NA	NA	NA	0.4653130287648054	62	0	unmethylated (<10%)	P59889	Zinc transporter ZIP1 (DrZIP1) (Solute carrier family 39 member 1) (Zrt- and Irt-like protein 1) (ZIP-1)	zinc ion import across plasma membrane [GO:0071578]; zinc ion transmembrane transport [GO:0071577]; zinc ion transport [GO:0006829]	hit with GO BP
GN002058	Chromosome_9A	213	1	1	47.88732394366197	0.08201771274547555	79.54545454545455	1	1	79.54545454545455	1	1	NA	NA	NA	82.63358778625954	12	1	NA	NA	NA	NA	no Swiss-Prot hit
GN020537	Chromosome_9A	31821	12	560	34.335815970585465	0.5972936801857521	70.42409478463071	558	0.7240143369175627	92.20202020202021	39	0.9487179487179487	68.82225326161253	519	0.7071290944123314	0.9689495705791675	55	0	methylated (>=50%)	Q0VD51	E3 ubiquitin-protein ligase RNF13 (EC 2.3.2.27) (RING finger protein 13)	positive regulation of JNK cascade [GO:0046330]; protein autoubiquitination [GO:0051865]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020529	Chromosome_9A	384	1	8	46.614583333333336	0.43389830508474575	0.8379888268156425	8	0	0.8379888268156425	8	0	NA	NA	NA	0.7996237064910631	32	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020528	Chromosome_9A	14925	9	242	36.1608040201005	0.4969298311991888	85.6816638894032	242	0.9338842975206612	92.00492004920049	89	0.9662921348314607	83.56401384083046	153	0.9150326797385621	1.0317460317460319	35	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020513	Chromosome_9A	1466	3	59	41.88267394270123	0.9191222570532915	0.5040322580645161	59	0	0.6309148264984227	52	0	0	7	0	0.49443757725587145	59	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020514	Chromosome_9A	3007	3	93	38.44363152643831	0.839180417893249	0.5351027397260274	93	0	0.2159827213822894	20	0	0.6139882541377469	73	0	0.6010171058714748	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020515	Chromosome_9A	636	1	2	43.23899371069182	0.08214931542237149	0	2	0	0	2	0	NA	NA	NA	0.5694760820045558	65	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020516	Chromosome_9A	918	1	48	45.20697167755991	1.031605562579014	0.8308157099697885	48	0	0.8308157099697885	48	0	NA	NA	NA	0.8553654743390358	43	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020517	Chromosome_9A	15210	14	429	37.14661406969099	0.8189500289232845	1.008827238335435	387	0	0.6879419071278425	115	0	1.146319495619422	272	0	0.6050420168067226	55	0	unmethylated (<10%)	Q9BYX4	Interferon-induced helicase C domain-containing protein 1 (EC 3.6.4.13) (Clinically amyopathic dermatomyositis autoantigen 140 kDa) (CADM-140 autoantigen) (Helicase with 2 CARD domains) (Helicard) (Interferon-induced with helicase C domain protein 1) (Melanoma differentiation-associated protein 5) (MDA-5) (Murabutide down-regulated protein) (RIG-I-like receptor 2) (RLR-2) (RNA helicase-DEAD box protein 116)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cellular response to virus [GO:0098586]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; innate immune response [GO:0045087]; MDA-5 signaling pathway [GO:0039530]; negative regulation of viral genome replication [GO:0045071]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of tumor necrosis factor production [GO:0032760]; protein complex oligomerization [GO:0051259]; protein sumoylation [GO:0016925]; regulation of type III interferon production [GO:0034344]; response to virus [GO:0009615]	hit with GO BP
GN020518	Chromosome_9A	9641	14	237	37.070843273519344	0.7156593200081184	0.7140895358418017	237	0	0.5545993497800726	104	0	0.8605549701440113	133	0	1.2703252032520325	43	0	unmethylated (<10%)	Q6Q899	Antiviral innate immune response receptor RIG-I (ATP-dependent RNA helicase DDX58) (EC 3.6.4.13) (DEAD box protein 58) (RIG-I-like receptor 1) (RLR-1) (RNA sensor RIG-I) (Retinoic acid-inducible gene 1 protein) (RIG-1) (Retinoic acid-inducible gene I protein) (RIG-I)	antiviral innate immune response [GO:0140374]; cellular response to exogenous dsRNA [GO:0071360]; cytoplasmic pattern recognition receptor signaling pathway [GO:0002753]; defense response to virus [GO:0051607]; detection of virus [GO:0009597]; gene expression [GO:0010467]; innate immune response [GO:0045087]; mRNA transcription [GO:0009299]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of gene expression [GO:0010628]; positive regulation of granulocyte macrophage colony-stimulating factor production [GO:0032725]; positive regulation of interferon-alpha production [GO:0032727]; positive regulation of interferon-beta production [GO:0032728]; positive regulation of interleukin-6 production [GO:0032755]; positive regulation of interleukin-8 production [GO:0032757]; positive regulation of myeloid dendritic cell cytokine production [GO:0002735]; positive regulation of response to cytokine stimulus [GO:0060760]; positive regulation of transcription by RNA polymerase II [GO:0045944]; positive regulation of tumor necrosis factor production [GO:0032760]; regulation of cell migration [GO:0030334]; response to exogenous dsRNA [GO:0043330]; response to virus [GO:0009615]; RIG-I signaling pathway [GO:0039529]	hit with GO BP
GN020519	Chromosome_9A	1965	4	55	36.74300254452926	0.843597789434245	0.9789702683103698	55	0	0.933997509339975	35	0	1.0416666666666667	20	0	0.5534417156693185	62	0	unmethylated (<10%)	Q9CZJ2	Heat shock 70 kDa protein 12B	angiogenesis [GO:0001525]; endothelial cell migration [GO:0043542]	hit with GO BP
GN020520	Chromosome_9A	789	1	29	39.67046894803549	0.9412176059234882	1.0597302504816957	29	0	1.0597302504816957	29	0	NA	NA	NA	0.9352268791132664	53	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN020521	Chromosome_9A	1666	3	46	37.09483793517407	0.8136752136752137	0.7656065959952886	46	0	0.7960199004975125	32	0	0.7215007215007215	14	0	0.946969696969697	59	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN020522	Chromosome_9A	1149	1	36	39.51261966927763	0.8096617601002192	0.598404255319149	36	0	0.598404255319149	36	0	NA	NA	NA	0.7231404958677686	52	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN020523	Chromosome_9A	3061	4	102	38.64750081672656	0.9024644040165797	0.8418254319893664	102	0	0.7021650087770626	80	0	1.2773722627737227	22	0	0.5149330587023687	52	0	unmethylated (<10%)	Q8K0U4	Heat shock 70 kDa protein 12A	import into nucleus [GO:0051170]; inflammatory response [GO:0006954]; liver development [GO:0001889]; macrophage activation [GO:0042116]	hit with GO BP
GN020524	Chromosome_9A	11496	9	129	36.22129436325678	0.34553289646133684	93.69844489519946	129	0.9844961240310077	87.8556557945871	29	0.9310344827586207	95.11252939200537	100	1	34.33734939759036	27	0.2222222222222222	methylated (>=50%)	Q28G26	Phosphatidylinositol 4-kinase type 2-beta (EC 2.7.1.67) (Phosphatidylinositol 4-kinase type II-beta)	endosome organization [GO:0007032]; Golgi organization [GO:0007030]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]	hit with GO BP
GN002404	Chromosome_9A	756	1	36	46.560846560846564	0.8938811705586758	91.41791044776119	8	1	91.41791044776119	8	1	NA	NA	NA	78.93462469733656	22	1	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020525	Chromosome_9A	42435	28	742	36.36620714033227	0.5300237760838132	77.59543916668886	726	0.8126721763085399	80.07077140835102	174	0.8045977011494253	77.02152796009452	552	0.8152173913043478	43.89269406392694	39	0.358974358974359	methylated (>=50%)	Q8CGF7	Transcription elongation regulator 1 (Formin-binding protein 28) (FBP 28) (TATA box-binding protein-associated factor 2S) (Transcription factor CA150) (p144)	DNA-templated transcription [GO:0006351]; mRNA processing [GO:0006397]; negative regulation of transcription by RNA polymerase II [GO:0000122]; positive regulation of transcription by RNA polymerase II [GO:0045944]; RNA splicing [GO:0008380]	hit with GO BP
GN020511	Chromosome_9A	10234	4	120	38.94860269689271	0.3214912031548065	93.98965105479634	118	1	93.97163120567376	21	1	93.99110856159473	97	1	75.5331088664422	16	0.9375	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020512	Chromosome_9A	2639	2	72	37.02159909056461	0.7962786019612773	0.44642857142857145	72	0	0.4658385093167702	28	0	0.4343629343629344	44	0	0.16479894528675015	50	0	unmethylated (<10%)	Q86Z23	Complement C1q-like protein 4 (C1q and tumor necrosis factor-related protein 11) (C1q/TNF-related protein 11)	maintenance of synapse structure [GO:0099558]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN020509	Chromosome_9A	6824	6	94	36.107854630715124	0.42782900072565844	79.25758005100595	94	0.9042553191489362	82.8	29	0.7931034482758621	78.30154731917956	65	0.9538461538461539	1.7893088794453142	65	0	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020508	Chromosome_9A	675	1	30	46.666666666666664	0.8177192699079309	0.5787037037037037	30	0	0.5787037037037037	30	0	NA	NA	NA	0.7142857142857143	69	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020507	Chromosome_9A	11669	8	141	36.68694832462079	0.3597630892593817	84.197562872699	141	0.9078014184397163	73.09546769527483	19	0.7894736842105263	85.92182117717537	122	0.9262295081967213	51.137884872824635	29	0.6551724137931034	methylated (>=50%)	Q8R0X2	CDK2-associated and cullin domain-containing protein 1	G1/S transition of mitotic cell cycle [GO:0000082]; positive regulation of cell population proliferation [GO:0008284]; positive regulation of protein kinase activity [GO:0045860]; ubiquitin-dependent protein catabolic process [GO:0006511]	hit with GO BP
GN020506	Chromosome_9A	11794	10	218	38.05324741393929	0.5126714651211435	87.35730371981052	216	0.9305555555555556	79.49640287769785	19	0.7368421052631579	88.10029749256269	197	0.949238578680203	76.89969604863222	71	0.704225352112676	methylated (>=50%)	A6QPC8	EP300-interacting inhibitor of differentiation 3 (EID-3) (EID-1-like inhibitor of differentiation 3) (Non-structural maintenance of chromosomes element 4 homolog B) (NS4EB) (Non-SMC element 4 homolog B)	DNA repair [GO:0006281]	hit with GO BP
GN020505	Chromosome_9A	8511	5	105	37.527905064034776	0.3524536338628095	89.80973879393744	105	0.9809523809523809	90.633608815427	16	1	89.70051132213294	89	0.9775280898876404	36.73890608875129	62	0.4032258064516129	methylated (>=50%)	Q9D172	Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial	NA	hit, no GO BP
GN020504	Chromosome_9A	8278	12	141	35.33462188934525	0.5469695436039319	82.3974609375	140	0.8857142857142857	84.8249027237354	41	0.8780487804878049	81.44242218064296	99	0.8888888888888888	49.95353159851301	48	0.5208333333333334	methylated (>=50%)	P45954	Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (SBCAD) (EC 1.3.8.1) (2-methyl branched chain acyl-CoA dehydrogenase) (2-MEBCAD) (2-methylbutyryl-coenzyme A dehydrogenase) (2-methylbutyryl-CoA dehydrogenase) (EC 1.3.8.5)	fatty acid metabolic process [GO:0006631]; L-isoleucine catabolic process [GO:0006550]	hit with GO BP
GN020503	Chromosome_9A	1961	6	69	39.163691993880676	0.9185198761811665	0.3861003861003861	69	0	0.16806722689075632	47	0	0.7518796992481203	22	0	1.1641910879164994	45	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020502	Chromosome_9A	5731	3	159	33.519455592392255	0.9880091685026803	0.9441087613293051	158	0	0.8347826086956521	47	0	0.9848386678761176	111	0	0.6378454996456414	76	0	unmethylated (<10%)	P56407	Homeobox protein ceh-9	cell differentiation [GO:0030154]; neuron differentiation [GO:0030182]; regulation of transcription by RNA polymerase II [GO:0006357]	hit with GO BP
GN020501	Chromosome_9A	1511	2	55	35.8041032428855	1.1358728336340276	0.4641516887221015	53	0	0.47064096817570594	26	0	0.4590395480225989	27	0	0.3948312993539124	38	0	unmethylated (<10%)	A9XE49	Interleukin 17-like protein (CgIL-17)	NA	hit, no GO BP
GN020500	Chromosome_9A	378	1	15	42.857142857142854	0.8908091123330715	2.959501557632399	15	0	2.959501557632399	15	0	NA	NA	NA	0.9177118384827164	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020499	Chromosome_9A	10360	10	160	36.013513513513516	0.476618493004554	87.61087267525036	160	0.98125	91.85918591859186	33	1	86.71974154840198	127	0.9763779527559056	24.361022364217252	49	0.20408163265306123	methylated (>=50%)	Q28811	Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme)	photoreactive repair [GO:0000719]; UV protection [GO:0009650]	hit with GO BP
GN020498	Chromosome_9A	24646	10	430	35.36476507343991	0.559026347683416	44.11266268980477	423	0.4160756501182033	28.91213389121339	43	0.32558139534883723	45.45253374640407	380	0.4263157894736842	0.7117437722419929	63	0	sparse (10-50%)	Q4R910	Ubiquitin-associated domain-containing protein 2 (UBA domain-containing protein 2) (Phosphoglycerate dehydrogenase-like protein 1)	negative regulation of canonical Wnt signaling pathway [GO:0090090]	hit with GO BP
GN020497	Chromosome_9A	695	2	23	42.15827338129496	0.7511748120300752	0.49603174603174605	23	0	0.4136504653567735	22	0	2.4390243902439024	1	0	0.7575757575757576	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020496	Chromosome_9A	212	1	8	49.056603773584904	0.6625	0.8810572687224669	8	0	0.8810572687224669	8	0	NA	NA	NA	0.2840909090909091	61	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN011533	Chromosome_9A	557	2	28	42.72890484739677	1.101412429378531	0.5931198102016607	26	0	0.32948929159802304	21	0	1.271186440677966	5	0	0.763566948459231	39	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020492	Chromosome_9A	807	1	21	42.75092936802974	0.572069943289225	0.11441647597254005	21	0	0.11441647597254005	21	0	NA	NA	NA	0.6841505131128849	50	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020493	Chromosome_9A	381	1	10	44.61942257217848	0.5363175675675675	1.2345679012345678	10	0	1.2345679012345678	10	0	NA	NA	NA	0.7992622194897018	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020494	Chromosome_9A	798	1	29	59.64912280701754	0.4160733549083064	0	3	0	0	3	0	NA	NA	NA	0.7986309184255562	66	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020495	Chromosome_9A	237	1	8	42.19409282700422	0.7611401043757527	0.8368200836820083	8	0	0.8368200836820083	8	0	NA	NA	NA	0.3995433789954338	48	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020488	Chromosome_9A	333	1	9	41.74174174174174	0.6230769230769231	0.2518891687657431	9	0	0.2518891687657431	9	0	NA	NA	NA	0.7134703196347032	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020489	Chromosome_9A	3117	4	65	37.632338787295474	0.5937560443811433	80.24830699774266	65	0.9230769230769231	81.67239404352806	18	0.8888888888888888	79.78285286409584	47	0.9361702127659575	1.828499369482976	73	0	methylated (>=50%)	Q9BTE3	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)	DNA-templated DNA replication [GO:0006261]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN020490	Chromosome_9A	7044	12	109	36.65530948324815	0.46318174579044147	91.85373429337851	109	1	92.55255255255256	33	1	91.63898117386489	76	1	94.64847848898216	38	1	methylated (>=50%)	Q7ZYP6	Mini-chromosome maintenance complex-binding protein (MCM-BP) (MCM-binding protein)	DNA-templated DNA replication [GO:0006261]; sister chromatid cohesion [GO:0007062]	hit with GO BP
GN020491	Chromosome_9A	3312	4	106	36.35265700483092	0.9694158189469498	0.47253396337861786	106	0	0.8014247551202137	22	0	0.37917087967644086	84	0	0.8221225710014948	74	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020481	Chromosome_9A	4636	8	149	37.33822260569456	0.9227066046153763	0.7377598926894702	148	0	0.6550218340611353	61	0	0.7744433688286544	87	0	0.9364218827008378	69	0	unmethylated (<10%)	Q9D826	Peroxisomal sarcosine oxidase (PSO) (EC 1.5.3.1) (EC 1.5.3.7) (L-pipecolate oxidase) (L-pipecolic acid oxidase)	amino acid catabolic process [GO:0009063]; L-lysine catabolic process [GO:0019477]	hit with GO BP
GN020482	Chromosome_9A	13621	11	302	38.0001468320975	0.6159967642343067	89.96486212852123	268	0.9514925373134329	90.26999490575649	36	0.9166666666666666	89.92446722417048	232	0.9568965517241379	35.15092502434275	41	0.2926829268292683	methylated (>=50%)	Q9GR88	Eukaryotic peptide chain release factor subunit 1 (Eukaryotic release factor 1) (eRF1)	NA	hit, no GO BP
GN020483	Chromosome_9A	4608	6	62	36.41493055555556	0.4083909286485173	92.81221922731356	61	1	90.93717816683831	19	1	93.58108108108108	42	1	62.98237255836113	29	0.6551724137931034	methylated (>=50%)	Q8BP74	L-seryl-tRNA(Sec) kinase (EC 2.7.1.164) (O-phosphoseryl-tRNA(Sec) kinase)	selenium compound metabolic process [GO:0001887]; selenocysteine incorporation [GO:0001514]	hit with GO BP
GN020487	Chromosome_9A	1836	3	49	33.55119825708061	0.9506017603736303	0.42411390487730993	49	0	0.16181229773462782	13	0	0.4845322400298174	36	0	0.685785536159601	38	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020484	Chromosome_9A	2437	3	70	36.2330734509643	0.8767088087162093	0.704225352112676	35	0	0.6024096385542169	10	0	0.7246376811594203	25	0	1.314708299096138	33	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020486	Chromosome_9A	2437	3	70	36.15100533442757	0.8807008848826524	0.24539877300613497	30	0	0	4	0	0.2617801047120419	26	0	7.001321003963012	17	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020485	Chromosome_9A	2077	3	59	34.713529128550796	0.9459857958931605	2.6325026325026326	59	0	3.1327287716405605	23	0	2.26161369193154	36	0	0.5698005698005698	14	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020479	Chromosome_9A	1434	1	62	44.07252440725244	0.8943117235829603	0.9300930093009301	62	0	0.9300930093009301	62	0	NA	NA	NA	2.8203556100551808	51	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020480	Chromosome_9A	2400	1	105	42.375	0.9781013965114383	1.3346354166666667	105	0	1.3346354166666667	105	0	NA	NA	NA	0.7702182284980744	52	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020477	Chromosome_9A	958	2	37	41.44050104384134	0.9083593870124546	0.33156498673740054	37	0	0.2358490566037736	26	0	0.45454545454545453	11	0	0.725733293014817	79	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020476	Chromosome_9A	1090	2	25	36.23853211009175	0.6986462926879294	0.4691689008042895	25	0	0.7947019867549668	14	0	0.13568521031207598	11	0	0.6816632583503749	51	0	unmethylated (<10%)	Q7Z5L3	Complement C1q-like protein 2 (C1q and tumor necrosis factor-related protein 10) (C1q/TNF-related protein 10)	maintenance of synapse structure [GO:0099558]; neurotransmitter receptor localization to postsynaptic specialization membrane [GO:0099645]; postsynaptic density assembly [GO:0097107]; regulation of synapse maturation [GO:0090128]; trans-synaptic signaling, modulating synaptic transmission [GO:0099550]	hit with GO BP
GN020473	Chromosome_9A	17552	18	339	37.010027347310846	0.5769913409523644	92.2543619766591	309	0.9967637540453075	95.58029689608637	53	1	91.82573155354581	256	0.99609375	60.666816850642036	64	0.640625	methylated (>=50%)	P35559	Insulin-degrading enzyme (EC 3.4.24.56) (Insulin protease) (Insulinase) (Insulysin)	amyloid-beta clearance [GO:0097242]; amyloid-beta clearance by cellular catabolic process [GO:0150094]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of endogenous peptide antigen via MHC class I [GO:0019885]; bradykinin catabolic process [GO:0010815]; hormone catabolic process [GO:0042447]; insulin catabolic process [GO:1901143]; insulin metabolic process [GO:1901142]; insulin receptor recycling [GO:0038020]; negative regulation of proteolysis [GO:0045861]; peptide catabolic process [GO:0043171]; protein catabolic process [GO:0030163]; proteolysis [GO:0006508]; regulation of aerobic respiration [GO:1903715]; response to oxidative stress [GO:0006979]; ubiquitin recycling [GO:0010992]	hit with GO BP
GN020474	Chromosome_9A	9252	9	173	35.77604842196282	0.5849669762913454	93.97438589124502	166	1	95.12605042016807	30	1	93.7088231494639	136	1	72.01044386422977	36	0.8888888888888888	methylated (>=50%)	Q9JHR7	Insulin-degrading enzyme (EC 3.4.24.56) (Insulin protease) (Insulinase) (Insulysin)	amyloid-beta clearance [GO:0097242]; amyloid-beta clearance by cellular catabolic process [GO:0150094]; amyloid-beta metabolic process [GO:0050435]; antigen processing and presentation of endogenous peptide antigen via MHC class I [GO:0019885]; bradykinin catabolic process [GO:0010815]; hormone catabolic process [GO:0042447]; insulin catabolic process [GO:1901143]; insulin metabolic process [GO:1901142]; insulin receptor recycling [GO:0038020]; negative regulation of proteolysis [GO:0045861]; peptide catabolic process [GO:0043171]; protein catabolic process [GO:0030163]; proteolysis [GO:0006508]; regulation of aerobic respiration [GO:1903715]; response to oxidative stress [GO:0006979]; ubiquitin recycling [GO:0010992]	hit with GO BP
GN020475	Chromosome_9A	18330	13	226	35.59192580469176	0.39035205919102334	58.58585858585859	220	0.5454545454545454	56.559065934065934	62	0.6774193548387096	59.290661571530926	158	0.4936708860759494	54.573170731707314	16	0.625	methylated (>=50%)	Q6V7V2	Rhotekin	actomyosin contractile ring assembly [GO:0000915]; mitotic cytokinesis [GO:0000281]; regulation of apoptotic process [GO:0042981]; Rho protein signal transduction [GO:0007266]; septin ring organization [GO:0031106]; signal transduction [GO:0007165]	hit with GO BP
GN020443	Chromosome_9A	5793	3	151	36.94113585361644	0.7659135743123796	14.775831592479511	151	0.046357615894039736	7.908782144590005	23	0	16.138661531054407	128	0.0546875	0.7862759113652609	73	0	sparse (10-50%)	NA	NA	NA	no Swiss-Prot hit
GN020444	Chromosome_9A	1445	2	53	44.844290657439444	0.77818421988518	0.7070707070707071	49	0	0.8849557522123894	13	0	0.5576208178438662	36	0	0.48348106365834004	42	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020445	Chromosome_9A	7633	6	227	35.97537010349797	0.9192614038187188	1.487946799667498	225	0	0.6202924235711121	70	0	1.6883249769773867	155	0	0.5346005346005346	54	0	unmethylated (<10%)	Q5ZJU0	Monocarboxylate transporter 9 (MCT 9) (Solute carrier family 16 member 9)	carboxylic acid transmembrane transport [GO:1905039]; carnitine transmembrane transport [GO:1902603]; creatine transmembrane transport [GO:0015881]	hit with GO BP
GN020446	Chromosome_9A	2367	1	121	45.289395859738065	0.9989083426339286	1.0893246187363834	121	0	1.0893246187363834	121	0	NA	NA	NA	0.48154093097913325	64	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020447	Chromosome_9A	2070	5	54	41.54589371980676	0.6046247464503043	0.3121098626716604	49	0	0.4884004884004884	32	0	0.1277139208173691	17	0	0.6524317912218268	39	0	unmethylated (<10%)	Q6PCJ1	Dynactin subunit 1	cytoplasmic microtubule organization [GO:0031122]; establishment of mitotic spindle orientation [GO:0000132]; nuclear migration [GO:0007097]; positive regulation of intracellular protein transport [GO:0090316]; regulation of mitotic spindle organization [GO:0060236]	hit with GO BP
GN020448	Chromosome_9A	56198	31	626	36.02263425744688	0.3444168362319998	75.52333956539063	531	0.8606403013182674	84.9361855114147	96	0.9895833333333334	73.58853088974283	435	0.832183908045977	34.31805632247377	49	0.32653061224489793	methylated (>=50%)	Q86UK5	Limbin (Ellis-van Creveld syndrome protein 2) (EVC2)	smoothened signaling pathway [GO:0007224]	hit with GO BP
GN020449	Chromosome_9A	17732	16	171	36.49898488608166	0.31348509065945995	71.98448448448448	171	0.8245614035087719	77.7306468716861	62	0.9354838709677419	68.83594809219446	109	0.7614678899082569	51.5695067264574	8	0.5	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020450	Chromosome_9A	9807	8	73	32.75211583562761	0.2867897665817941	79.25796812749005	72	0.9166666666666666	84.73837209302326	14	0.9285714285714286	78.125	58	0.9137931034482759	86.06726149622511	26	1	methylated (>=50%)	Q68FT3	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 (EC 1.-.-.-)	mitochondrion organization [GO:0007005]	hit with GO BP
GN020451	Chromosome_9A	13328	10	184	38.13025210084034	0.38472418670438474	79.40228537943159	184	0.9510869565217391	85.1528384279476	19	1	78.98869346733669	165	0.9454545454545454	73.15175097276264	31	0.8387096774193549	methylated (>=50%)	Q3MHH6	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 (EC 1.-.-.-)	mitochondrion organization [GO:0007005]	hit with GO BP
GN020452	Chromosome_9A	3247	4	37	35.602094240837694	0.3642131941223371	53.953229398663694	37	0.5135135135135135	40.483701366982125	21	0.3333333333333333	69.11242603550296	16	0.75	64.69135802469135	23	0.782608695652174	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN020455	Chromosome_9A	12642	4	165	33.08811896851764	0.47707820731504824	74.58030218242865	127	0.7637795275590551	53.341148886283705	21	0.3333333333333333	77.45830023828435	106	0.8490566037735849	50.35783994795055	39	0.358974358974359	methylated (>=50%)	NA	NA	NA	no Swiss-Prot hit
GN003909	Chromosome_9A	408	1	3	43.627450980392155	0.15523145212428663	32.48730964467005	3	0	32.48730964467005	3	0	NA	NA	NA	26.375982844889208	19	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020680	Chromosome_9A	347	1	6	38.61671469740634	0.4705084745762712	0.796812749003984	6	0	0.796812749003984	6	0	NA	NA	NA	0.8192244675040962	35	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020466	Chromosome_9A	22226	15	673	37.55961486547287	0.8592600634818877	0.7052323691907703	673	0	0.6568778979907264	140	0	0.7150113307806517	533	0	12.649164677804295	52	0	unmethylated (<10%)	Q55E58	Probable serine/threonine-protein kinase pats1 (EC 2.7.11.1) (Protein associated with the transduction of signal 1)	cheating during chimeric sorocarp development [GO:0099139]; mitotic cytokinesis [GO:0000281]; phosphatidylinositol dephosphorylation [GO:0046856]	hit with GO BP
GN020467	Chromosome_9A	1131	1	1	44.47391688770999	0.025826635001826817	0	1	0	0	1	0	NA	NA	NA	0.5293159609120521	36	0	NA	NA	NA	NA	no Swiss-Prot hit
GN020468	Chromosome_9A	2832	2	101	37.67655367231639	1.0055050515703108	1.5133876600698486	72	0	0.46296296296296297	24	0	1.7000274197970935	48	0	0.6491673722833756	57	0	unmethylated (<10%)	Q95JJ0	Protein O-mannose kinase (POMK) (EC 2.7.1.183) (Protein kinase-like protein SgK196) (Sugen kinase 196)	carbohydrate phosphorylation [GO:0046835]; protein O-linked glycosylation [GO:0006493]	hit with GO BP
GN020469	Chromosome_9A	1321	3	11	34.97350492051476	0.2752865397366676	0.2849002849002849	11	0	4.166666666666667	1	0	0.14749262536873156	10	0	0.6496631376323387	73	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020603	Chromosome_9A	1669	3	76	43.678849610545235	0.9757380882782812	0.7396449704142012	67	0	0.7606787595084845	61	0	0.6269592476489029	6	0	0.737680731779286	54	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020602	Chromosome_9A	10490	5	100	32.92659675881792	0.35472168719025254	62.76658767772512	100	0.67	66.93735498839906	28	0.7142857142857143	61.33651551312649	72	0.6527777777777778	0.4333694474539545	30	0	methylated (>=50%)	A0A1B0GU71	Uncharacterized protein CFAP97D2 (CFAP97 domain-containing protein 2)	NA	hit, no GO BP
GN020601	Chromosome_9A	1468	2	34	38.35149863760218	0.6389144905273938	88.52130325814537	34	1	86.00508905852418	17	1	90.1571546732837	17	1	55.437977660199884	42	0.5476190476190477	methylated (>=50%)	O35817	A-kinase anchor protein 14 (AKAP-14) (TAKAP-1.2) (Testis-specific A-kinase-anchoring protein TAKAP-80)	spermatogenesis [GO:0007283]	hit with GO BP
GN020600	Chromosome_9A	4506	3	123	34.753661784287615	0.9042214228030248	0.6572329152974314	121	0	0.7099143206854345	25	0	0.6373545169037502	96	0	0.6896551724137931	24	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit
GN020599	Chromosome_9A	20258	12	423	35.39836114127752	0.6678956044598423	1.7242482405630197	381	0	2.48032080796079	93	0	1.5166958861662658	288	0	0.6241787122207622	40	0	unmethylated (<10%)	A3KPQ7	Cell surface hyaluronidase (EC 3.2.1.35) (Cell migration-inducing hyaluronidase 2) (Protein frozen ventricle) (Protein wickham) (Transmembrane protein 2)	atrioventricular valve formation [GO:0003190]; cardiac muscle tissue morphogenesis [GO:0055008]; cell migration involved in heart formation [GO:0060974]; cell migration to the midline involved in heart development [GO:0003318]; embryonic heart tube morphogenesis [GO:0003143]; endocardial cushion development [GO:0003197]; heart looping [GO:0001947]; hyaluronan catabolic process [GO:0030214]; muscle attachment [GO:0016203]; muscle tissue morphogenesis [GO:0060415]; positive regulation of extracellular matrix assembly [GO:1901203]; positive regulation of vascular endothelial growth factor signaling pathway [GO:1900748]; regulation of sprouting angiogenesis [GO:1903670]; regulation of Wnt signaling pathway [GO:0030111]	hit with GO BP
GN020441	Chromosome_9A	582	1	14	47.766323024054984	0.5264586160108549	1.0899182561307903	14	0	1.0899182561307903	14	0	NA	NA	NA	0.907258064516129	11	0	unmethylated (<10%)	NA	NA	NA	no Swiss-Prot hit