FastQCFastQC Report
Tue 5 Aug 2025
Rio_barcode03_combined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameRio_barcode03_combined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences631809
Total Bases391 Mbp
Sequences flagged as poor quality0
Sequence length112-136452
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)