Index of /v1_web/owlshell/bu-github/project-ostrea-chil/code

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[ ]00-qc.Rmd 2026-10-08 21:13 3.5K 
[TXT]01-repro-annot.Rmd 2026-10-08 21:13 2.0K 
[ ]02-RNAseq.Rmd 2026-10-08 21:13 10K 
[ ]03-annotation.Rmd 2026-10-08 21:13 1.3K 
[TXT]04-align-v1.Rmd 2026-10-08 21:13 16K 
[TXT]04-align-v1.html 2026-10-08 21:13 620K 
[TXT]04.5-align-v1-tr.Rmd 2026-10-08 21:13 7.0K 
[ ]05-synteny.Rmd 2026-10-08 21:13 718  
[ ]06-Annot-novel.Rmd 2026-10-08 21:13 723  
[ ]07-lncRNA-discovery.Rmd2026-10-08 21:13 8.6K 
[ ]08-align-v1-contrain..>2026-10-08 21:13 15K 
[TXT]09-align-v1-clean.Rmd 2026-10-08 21:13 6.1K 
[ ]10-illumina.Rmd 2026-10-08 21:13 2.1K 
[ ]11-annotate_unmatche..>2026-10-08 21:13 5.2K 
[ ]11-extract_and_blast..>2026-10-08 21:13 3.3K 
[ ]11-extract_sequences.sh2026-10-08 21:13 1.9K 
[ ]11-identify_unmatche..>2026-10-08 21:13 2.1K 
[ ]11-simple_annotation.sh2026-10-08 21:13 4.4K 
[TXT]12-compare-genomes.py 2026-10-08 21:13 23K 
[ ]13-wgbs-read-overlap.sh2026-10-10 16:52 2.8K 
[ ]13-wgbs-submit.sh 2026-10-10 16:52 1.5K 
[ ]13.0-wgbs-config.sh 2026-10-10 16:52 3.9K 
[ ]13.1-wgbs-genome-pre..>2026-10-10 16:52 1.3K 
[ ]13.2-wgbs-trim-align.sh2026-10-10 16:52 5.4K 
[ ]13.3-wgbs-qc-summary.sh2026-10-10 16:52 3.1K 
[TXT]13.4-wgbs-methylatio..>2026-10-10 16:52 19K 
[ ]13.5-wgbs-gene-annot..>2026-10-10 16:52 4.0K 
[TXT]13.6-wgbs-methylatio..>2026-10-10 16:52 39K 
[ ]13.7-wgbs-bs-snp-che..>2026-10-09 20:20 4.0K 
[TXT]13.7-wgbs-bs-snp-che..>2026-10-09 20:19 7.9K 
[ ]13.7-wgbs-bs-snp-che..>2026-10-09 20:20 3.2K 
[ ]13.7-wgbs-snps.sh 2026-10-10 16:52 5.8K 
[TXT]13.8-wgbs-dmr-go.Rmd 2026-10-10 16:52 10K 
[ ]13.9-wgbs-bs-snp-che..>2026-10-10 16:52 5.1K 
[TXT]13.9-wgbs-bs-snp-che..>2026-10-10 16:52 11K 
[ ]13.9-wgbs-bs-snp-che..>2026-10-10 16:52 3.4K 
[TXT]13.10-wgbs-hapa-comp..>2026-10-10 16:52 15K 
[ ]13.10-wgbs-hapa-comp..>2026-10-10 16:52 4.1K 
[ ]13.11-wgbs-hapa-lift..>2026-10-10 16:52 3.0K 
[ ]14.1-meth-compare-or..>2026-10-10 16:52 4.8K 
[TXT]14.2-meth-compare.Rmd 2026-10-10 16:52 20K 
[TXT]15-GN020540-fetch.R 2026-10-10 16:52 968  
[TXT]15-GN020540-locus.Rmd 2026-10-10 16:52 17K 
[TXT]compiled_metrics.csv 2025-08-06 12:39 7.0K 
[ ]deg_boxplots.pdf 2025-08-04 19:57 44K 
[ ]individual_DEG_boxpl..>2025-08-04 20:11 75K