239M_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 57604914 lines in total
Total number of methylation call strings processed: 115209828

Final Cytosine Methylation Report
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Total number of C's analysed:	1579910916

Total methylated C's in CpG context:	22190581
Total methylated C's in CHG context:	3101495
Total methylated C's in CHH context:	14701136

Total C to T conversions in CpG context:	159401957
Total C to T conversions in CHG context:	248603413
Total C to T conversions in CHH context:	1131912334

C methylated in CpG context:	12.2%
C methylated in non-CpG context:	1.3%