comparison	class	n	total_ref_bp
lean_vs_ref	snp	1135793	0
lean_vs_ref	indel	481750	24924785
lean_vs_ref	diverged	11223	231107087
lean_vs_ref	other	5920	19155604
lean_vs_ref	duplication	5003	20075758
lean_vs_ref	translocation	3968	121230248
lean_vs_ref	inversion	1183	17863312
lean_vs_ref	copy_var	605	1455164
lean_vs_ref	tandem_repeat	161	106952
sisco_vs_ref	snp	1234854	0
sisco_vs_ref	indel	539603	21747700
sisco_vs_ref	diverged	11975	175002089
sisco_vs_ref	other	9381	39582686
sisco_vs_ref	duplication	7631	41691847
sisco_vs_ref	translocation	6287	207857104
sisco_vs_ref	inversion	1614	38215460
sisco_vs_ref	copy_var	761	6686608
sisco_vs_ref	tandem_repeat	173	105688
lean_vs_sisco	snp	1240964	0
lean_vs_sisco	indel	449747	23168467
lean_vs_sisco	diverged	11383	197411331
lean_vs_sisco	other	10152	35306102
lean_vs_sisco	translocation	9934	230229226
lean_vs_sisco	duplication	6854	40768815
lean_vs_sisco	inversion	1030	49450957
lean_vs_sisco	copy_var	843	8775190
lean_vs_sisco	tandem_repeat	198	181100