usage: Plotting structural rearrangements between genomes [-h] [--sr SR]
                                                          [--bp BP] --genomes
                                                          GENOMES
                                                          [--markers MARKERS]
                                                          [--tracks TRACKS]
                                                          [--chrord CHRORD]
                                                          [--chrname CHRNAME]
                                                          [-o O] [--itx]
                                                          [--chr CHR]
                                                          [--reg REG] [--rtr]
                                                          [--nosyn] [--noinv]
                                                          [--notr] [--nodup]
                                                          [-s S] [--cfg CFG]
                                                          [-R] [-f F] [-H H]
                                                          [-W W] [-S S] [-d D]
                                                          [-b {agg,cairo,pdf,pgf,ps,svg,template}]
                                                          [-v] [--lf LOGFIN]
                                                          [--log {DEBUG,INFO,WARN}]
                                                          [--version]
Plotting structural rearrangements between genomes: error: argument --sr: can't open '/home/shared/16TB_HDD_01/sr320/github/project-lake-trout/analyses/23-genome-sv/syri/sisco_vs_ref.syri.out': [Errno 2] No such file or directory: '/home/shared/16TB_HDD_01/sr320/github/project-lake-trout/analyses/23-genome-sv/syri/sisco_vs_ref.syri.out'