[M::mm_idx_gen::27.068*1.49] collected minimizers
[M::mm_idx_gen::28.105*2.25] sorted minimizers
[M::main::28.105*2.25] loaded/built the index for 42 target sequence(s)
[M::mm_mapopt_update::29.205*2.20] mid_occ = 418
[M::mm_idx_stat] kmer size: 19; skip: 19; is_hpc: 0; #seq: 42
[M::mm_idx_stat::29.882*2.17] distinct minimizers: 100237465 (86.05% are singletons); average occurrences: 2.022; average spacing: 9.775; total length: 1981379816
[M::worker_pipeline::1981.466*4.41] mapped 7 sequences
[M::worker_pipeline::3124.180*4.74] mapped 9 sequences
[M::worker_pipeline::4059.616*5.30] mapped 10 sequences
[M::worker_pipeline::4980.267*5.79] mapped 11 sequences
[M::worker_pipeline::5471.326*5.60] mapped 6 sequences
[M::main] Version: 2.31-r1302
[M::main] CMD: /home/sr320/miniconda3/envs/syri_env/bin/minimap2 -t 40 -ax asm5 --eqx /home/shared/16TB_HDD_01/sr320/github/project-lake-trout/analyses/23-genome-sv/anchor/ref.chroms.fa /home/shared/16TB_HDD_01/sr320/github/project-lake-trout/analyses/23-genome-sv/anchor/siscowet.anchored.fa
[M::main] Real time: 5471.577 sec; CPU: 30657.834 sec; Peak RSS: 68.511 GB