NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 6,836.2 |
| Mean read quality | 29.0 |
| Median read length | 6,046.0 |
| Median read quality | 38.9 |
| Number of reads | 1,348,642.0 |
| Read length N50 | 7,356.0 |
| STDEV read length | 3,124.0 |
| Total bases | 9,219,541,520.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q10 | 1348641 (100.0%) 9219.5Mb |
| >Q15 | 1348470 (100.0%) 9218.3Mb |
| >Q20 | 1304681 (96.7%) 8868.8Mb |
| >Q25 | 1206826 (89.5%) 8078.5Mb |
| >Q30 | 1086149 (80.5%) 7121.2Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 40.0 (4604) |
| 2 | 40.0 (5006) |
| 3 | 40.0 (4915) |
| 4 | 40.0 (5131) |
| 5 | 40.0 (4496) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 41691 (22.0) |
| 2 | 41394 (26.7) |
| 3 | 41292 (25.2) |
| 4 | 41071 (16.0) |
| 5 | 40927 (20.4) |