SRR6995993.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.25.1 Bismark result file: single-end (SAM format) Ignoring first 10 bp Ignoring last 2 bp Output specified: comprehensive Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 8868796 lines in total Total number of methylation call strings processed: 8868796 Final Cytosine Methylation Report ================================= Total number of C's analysed: 152935230 Total methylated C's in CpG context: 21950555 Total methylated C's in CHG context: 651361 Total methylated C's in CHH context: 994755 Total C to T conversions in CpG context: 11855045 Total C to T conversions in CHG context: 41217630 Total C to T conversions in CHH context: 76265884 C methylated in CpG context: 64.9% C methylated in non-CpG context: 1.4%