SRR6995995.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.25.1 Bismark result file: single-end (SAM format) Ignoring first 10 bp Ignoring last 2 bp Output specified: comprehensive Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 4435166 lines in total Total number of methylation call strings processed: 4435166 Final Cytosine Methylation Report ================================= Total number of C's analysed: 73137008 Total methylated C's in CpG context: 8288247 Total methylated C's in CHG context: 276645 Total methylated C's in CHH context: 474611 Total C to T conversions in CpG context: 7415115 Total C to T conversions in CHG context: 19248592 Total C to T conversions in CHH context: 37433798 C methylated in CpG context: 52.8% C methylated in non-CpG context: 1.3%