SRR6995994.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.25.1 Bismark result file: single-end (SAM format) Ignoring first 10 bp Ignoring last 2 bp Output specified: comprehensive Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 192757 lines in total Total number of methylation call strings processed: 192757 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2605158 Total methylated C's in CpG context: 633775 Total methylated C's in CHG context: 16224 Total methylated C's in CHH context: 22681 Total C to T conversions in CpG context: 175491 Total C to T conversions in CHG context: 760037 Total C to T conversions in CHH context: 996950 C methylated in CpG context: 78.3% C methylated in non-CpG context: 2.2%