SRR6995993.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.25.1 Bismark result file: single-end (SAM format) Ignoring first 10 bp Ignoring last 2 bp Output specified: comprehensive Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 3718456 lines in total Total number of methylation call strings processed: 3718456 Final Cytosine Methylation Report ================================= Total number of C's analysed: 62063257 Total methylated C's in CpG context: 7010330 Total methylated C's in CHG context: 236902 Total methylated C's in CHH context: 411483 Total C to T conversions in CpG context: 6046047 Total C to T conversions in CHG context: 16058117 Total C to T conversions in CHH context: 32300378 C methylated in CpG context: 53.7% C methylated in non-CpG context: 1.3%