Module	Section	Sample Name	Source
Picard	DuplicationMetrics	MHW333-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW333-RG-picard_dups.log
Picard	DuplicationMetrics	MHW067-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW067-RG-picard_dups.log
Picard	DuplicationMetrics	MHW049-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW049-RG-picard_dups.log
Picard	DuplicationMetrics	MHW214-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW214-RG-picard_dups.log
Picard	DuplicationMetrics	MHW298-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW298-RG-picard_dups.log
Picard	DuplicationMetrics	MHW349-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW349-RG-picard_dups.log
Picard	DuplicationMetrics	MHW038-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW038-RG-picard_dups.log
Picard	DuplicationMetrics	MHW146-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW146-RG-picard_dups.log
Picard	DuplicationMetrics	MHW136-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW136-RG-picard_dups.log
Picard	DuplicationMetrics	MHW036-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW036-RG-picard_dups.log
Picard	DuplicationMetrics	MHW238-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW238-RG-picard_dups.log
Picard	DuplicationMetrics	MHW182-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW182-RG-picard_dups.log
Picard	DuplicationMetrics	MHW069-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW069-RG-picard_dups.log
Picard	DuplicationMetrics	MHW199-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW199-RG-picard_dups.log
Picard	DuplicationMetrics	MHW407-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW407-RG-picard_dups.log
Picard	DuplicationMetrics	MHW344-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW344-RG-picard_dups.log
Picard	DuplicationMetrics	MHW342-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW342-RG-picard_dups.log
Picard	DuplicationMetrics	MHW427-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW427-RG-picard_dups.log
Picard	DuplicationMetrics	MHW026-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW026-RG-picard_dups.log
Picard	DuplicationMetrics	MHW185-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW185-RG-picard_dups.log
Picard	DuplicationMetrics	MHW195-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW195-RG-picard_dups.log
Picard	DuplicationMetrics	MHW213-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW213-RG-picard_dups.log
Picard	DuplicationMetrics	MHW164-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW164-RG-picard_dups.log
Picard	DuplicationMetrics	MHW108-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW108-RG-picard_dups.log
Picard	DuplicationMetrics	MHW303-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW303-RG-picard_dups.log
Picard	DuplicationMetrics	MHW320-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW320-RG-picard_dups.log
Picard	DuplicationMetrics	MHW190-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW190-RG-picard_dups.log
Picard	DuplicationMetrics	MHW432-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW432-RG-picard_dups.log
Picard	DuplicationMetrics	MHW202-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW202-RG-picard_dups.log
Picard	DuplicationMetrics	MHW226-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW226-RG-picard_dups.log
Picard	DuplicationMetrics	MHW137-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW137-RG-picard_dups.log
Picard	DuplicationMetrics	MHW204-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW204-RG-picard_dups.log
Picard	DuplicationMetrics	MHW100-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW100-RG-picard_dups.log
Picard	DuplicationMetrics	MHW142-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW142-RG-picard_dups.log
Picard	DuplicationMetrics	MHW005-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW005-RG-picard_dups.log
Picard	DuplicationMetrics	MHW101-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW101-RG-picard_dups.log
Picard	DuplicationMetrics	MHW277-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW277-RG-picard_dups.log
Picard	DuplicationMetrics	MHW230-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW230-RG-picard_dups.log
Picard	DuplicationMetrics	MHW181-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW181-RG-picard_dups.log
Picard	DuplicationMetrics	MHW431-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW431-RG-picard_dups.log
Picard	DuplicationMetrics	MHW231-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW231-RG-picard_dups.log
Picard	DuplicationMetrics	MHW033-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW033-RG-picard_dups.log
Picard	DuplicationMetrics	MHW322-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW322-RG-picard_dups.log
Picard	DuplicationMetrics	MHW279-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW279-RG-picard_dups.log
Picard	DuplicationMetrics	MHW149-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW149-RG-picard_dups.log
Picard	DuplicationMetrics	MHW203-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW203-RG-picard_dups.log
Picard	DuplicationMetrics	MHW331-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW331-RG-picard_dups.log
Picard	DuplicationMetrics	MHW027-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW027-RG-picard_dups.log
Picard	DuplicationMetrics	MHW051-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW051-RG-picard_dups.log
Picard	DuplicationMetrics	MHW014-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW014-RG-picard_dups.log
Picard	DuplicationMetrics	MHW109-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW109-RG-picard_dups.log
Picard	DuplicationMetrics	MHW046-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW046-RG-picard_dups.log
Picard	DuplicationMetrics	MHW319-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW319-RG-picard_dups.log
Picard	DuplicationMetrics	MHW338-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW338-RG-picard_dups.log
Picard	DuplicationMetrics	MHW269-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW269-RG-picard_dups.log
Picard	DuplicationMetrics	MHW314-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW314-RG-picard_dups.log
Picard	DuplicationMetrics	MHW425-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW425-RG-picard_dups.log
Picard	DuplicationMetrics	MHW228-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW228-RG-picard_dups.log
Picard	DuplicationMetrics	MHW350-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW350-RG-picard_dups.log
Picard	DuplicationMetrics	MHW023-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW023-RG-picard_dups.log
Picard	DuplicationMetrics	MHW008-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW008-RG-picard_dups.log
Picard	DuplicationMetrics	MHW169-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW169-RG-picard_dups.log
Picard	DuplicationMetrics	MHW321-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW321-RG-picard_dups.log
Picard	DuplicationMetrics	MHW179-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW179-RG-picard_dups.log
Picard	DuplicationMetrics	MHW208-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW208-RG-picard_dups.log
Picard	DuplicationMetrics	MHW056-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW056-RG-picard_dups.log
Picard	DuplicationMetrics	MHW306-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW306-RG-picard_dups.log
Picard	DuplicationMetrics	MHW217-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW217-RG-picard_dups.log
Picard	DuplicationMetrics	MHW163-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW163-RG-picard_dups.log
Picard	DuplicationMetrics	MHW039-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW039-RG-picard_dups.log
Picard	DuplicationMetrics	MHW315-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW315-RG-picard_dups.log
Picard	DuplicationMetrics	MHW258-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW258-RG-picard_dups.log
Picard	DuplicationMetrics	MHW210-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW210-RG-picard_dups.log
Picard	DuplicationMetrics	MHW347-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW347-RG-picard_dups.log
Picard	DuplicationMetrics	MHW080-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW080-RG-picard_dups.log
Picard	DuplicationMetrics	MHW419-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW419-RG-picard_dups.log
Picard	DuplicationMetrics	MHW003-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW003-RG-picard_dups.log
Picard	DuplicationMetrics	MHW025-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW025-RG-picard_dups.log
Picard	DuplicationMetrics	MHW223-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW223-RG-picard_dups.log
Picard	DuplicationMetrics	MHW104-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW104-RG-picard_dups.log
Picard	DuplicationMetrics	MHW020-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW020-RG-picard_dups.log
Picard	DuplicationMetrics	MHW227-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW227-RG-picard_dups.log
Picard	DuplicationMetrics	MHW353-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW353-RG-picard_dups.log
Picard	DuplicationMetrics	MHW143-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW143-RG-picard_dups.log
Picard	DuplicationMetrics	MHW075-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW075-RG-picard_dups.log
Picard	DuplicationMetrics	MHW422-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW422-RG-picard_dups.log
Picard	DuplicationMetrics	MHW270-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW270-RG-picard_dups.log
Picard	DuplicationMetrics	MHW154-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW154-RG-picard_dups.log
Picard	DuplicationMetrics	MHW180-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW180-RG-picard_dups.log
Picard	DuplicationMetrics	MHW035-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW035-RG-picard_dups.log
Picard	DuplicationMetrics	MHW194-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW194-RG-picard_dups.log
Picard	DuplicationMetrics	MHW295-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW295-RG-picard_dups.log
Picard	DuplicationMetrics	MHW341-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW341-RG-picard_dups.log
Picard	DuplicationMetrics	MHW132-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW132-RG-picard_dups.log
Picard	DuplicationMetrics	MHW076-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW076-RG-picard_dups.log
Picard	DuplicationMetrics	MHW265-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW265-RG-picard_dups.log
Picard	DuplicationMetrics	MHW165-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW165-RG-picard_dups.log
Picard	DuplicationMetrics	MHW060-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW060-RG-picard_dups.log
Picard	DuplicationMetrics	MHW283-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW283-RG-picard_dups.log
Picard	DuplicationMetrics	MHW334-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW334-RG-picard_dups.log
Picard	DuplicationMetrics	MHW001-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW001-RG-picard_dups.log
Picard	DuplicationMetrics	MHW110-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW110-RG-picard_dups.log
Picard	DuplicationMetrics	MHW307-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW307-RG-picard_dups.log
Picard	DuplicationMetrics	MHW043-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW043-RG-picard_dups.log
Picard	DuplicationMetrics	MHW220-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW220-RG-picard_dups.log
Picard	DuplicationMetrics	MHW095-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW095-RG-picard_dups.log
Picard	DuplicationMetrics	MHW126-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW126-RG-picard_dups.log
Picard	DuplicationMetrics	MHW337-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW337-RG-picard_dups.log
Picard	DuplicationMetrics	MHW018-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW018-RG-picard_dups.log
Picard	DuplicationMetrics	MHW121-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW121-RG-picard_dups.log
Picard	DuplicationMetrics	MHW004-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW004-RG-picard_dups.log
Picard	DuplicationMetrics	MHW125-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW125-RG-picard_dups.log
Picard	DuplicationMetrics	MHW191-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW191-RG-picard_dups.log
Picard	DuplicationMetrics	MHW221-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW221-RG-picard_dups.log
Picard	DuplicationMetrics	MHW176-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW176-RG-picard_dups.log
Picard	DuplicationMetrics	MHW335-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW335-RG-picard_dups.log
Picard	DuplicationMetrics	MHW332-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW332-RG-picard_dups.log
Picard	DuplicationMetrics	MHW063-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW063-RG-picard_dups.log
Picard	DuplicationMetrics	MHW068-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW068-RG-picard_dups.log
Picard	DuplicationMetrics	MHW088-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW088-RG-picard_dups.log
Picard	DuplicationMetrics	MHW225-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW225-RG-picard_dups.log
Picard	DuplicationMetrics	MHW111-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW111-RG-picard_dups.log
Picard	DuplicationMetrics	MHW030-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW030-RG-picard_dups.log
Picard	DuplicationMetrics	MHW091-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW091-RG-picard_dups.log
Picard	DuplicationMetrics	MHW206-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW206-RG-picard_dups.log
Picard	DuplicationMetrics	MHW263-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW263-RG-picard_dups.log
Picard	DuplicationMetrics	MHW229-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW229-RG-picard_dups.log
Picard	DuplicationMetrics	MHW311-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW311-RG-picard_dups.log
Picard	DuplicationMetrics	MHW278-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW278-RG-picard_dups.log
Picard	DuplicationMetrics	MHW128-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW128-RG-picard_dups.log
Picard	DuplicationMetrics	MHW345-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW345-RG-picard_dups.log
Picard	DuplicationMetrics	MHW310-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW310-RG-picard_dups.log
Picard	DuplicationMetrics	MHW122-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW122-RG-picard_dups.log
Picard	DuplicationMetrics	MHW040-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW040-RG-picard_dups.log
Picard	DuplicationMetrics	MHW098-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW098-RG-picard_dups.log
Picard	DuplicationMetrics	MHW299-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW299-RG-picard_dups.log
Picard	DuplicationMetrics	MHW241-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW241-RG-picard_dups.log
Picard	DuplicationMetrics	MHW161-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW161-RG-picard_dups.log
Picard	DuplicationMetrics	MHW291-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW291-RG-picard_dups.log
Picard	DuplicationMetrics	MHW327-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW327-RG-picard_dups.log
Picard	DuplicationMetrics	MHW065-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW065-RG-picard_dups.log
Picard	DuplicationMetrics	MHW268-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW268-RG-picard_dups.log
Picard	DuplicationMetrics	MHW326-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW326-RG-picard_dups.log
Picard	DuplicationMetrics	MHW186-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW186-RG-picard_dups.log
Picard	DuplicationMetrics	MHW096-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW096-RG-picard_dups.log
Picard	DuplicationMetrics	MHW012-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW012-RG-picard_dups.log
Picard	DuplicationMetrics	MHW296-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW296-RG-picard_dups.log
Picard	DuplicationMetrics	MHW284-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW284-RG-picard_dups.log
Picard	DuplicationMetrics	MHW061-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW061-RG-picard_dups.log
Picard	DuplicationMetrics	MHW343-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW343-RG-picard_dups.log
Picard	DuplicationMetrics	MHW273-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW273-RG-picard_dups.log
Picard	DuplicationMetrics	MHW089-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW089-RG-picard_dups.log
Picard	DuplicationMetrics	MHW032-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW032-RG-picard_dups.log
Picard	DuplicationMetrics	MHW305-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW305-RG-picard_dups.log
Picard	DuplicationMetrics	MHW150-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW150-RG-picard_dups.log
Picard	DuplicationMetrics	MHW205-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW205-RG-picard_dups.log
Picard	DuplicationMetrics	MHW233-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW233-RG-picard_dups.log
Picard	DuplicationMetrics	MHW196-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW196-RG-picard_dups.log
Picard	DuplicationMetrics	MHW184-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW184-RG-picard_dups.log
Picard	DuplicationMetrics	MHW159-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW159-RG-picard_dups.log
Picard	DuplicationMetrics	MHW073-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW073-RG-picard_dups.log
Picard	DuplicationMetrics	MHW066-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW066-RG-picard_dups.log
Picard	DuplicationMetrics	MHW115-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW115-RG-picard_dups.log
Picard	DuplicationMetrics	MHW006-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW006-RG-picard_dups.log
Picard	DuplicationMetrics	MHW140-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW140-RG-picard_dups.log
Picard	DuplicationMetrics	MHW352-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW352-RG-picard_dups.log
Picard	DuplicationMetrics	MHW064-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW064-RG-picard_dups.log
Picard	DuplicationMetrics	MHW019-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW019-RG-picard_dups.log
Picard	DuplicationMetrics	MHW286-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW286-RG-picard_dups.log
Picard	DuplicationMetrics	MHW017-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW017-RG-picard_dups.log
Picard	DuplicationMetrics	MHW118-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW118-RG-picard_dups.log
Picard	DuplicationMetrics	MHW188-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW188-RG-picard_dups.log
Picard	DuplicationMetrics	MHW083-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW083-RG-picard_dups.log
Picard	DuplicationMetrics	MHW130-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW130-RG-picard_dups.log
Picard	DuplicationMetrics	MHW323-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW323-RG-picard_dups.log
Picard	DuplicationMetrics	MHW288-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW288-RG-picard_dups.log
Picard	DuplicationMetrics	MHW144-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW144-RG-picard_dups.log
Picard	DuplicationMetrics	MHW058-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW058-RG-picard_dups.log
Picard	DuplicationMetrics	MHW316-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW316-RG-picard_dups.log
Picard	DuplicationMetrics	MHW267-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW267-RG-picard_dups.log
Picard	DuplicationMetrics	MHW127-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW127-RG-picard_dups.log
Picard	DuplicationMetrics	MHW276-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW276-RG-picard_dups.log
Picard	DuplicationMetrics	MHW077-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW077-RG-picard_dups.log
Picard	DuplicationMetrics	MHW167-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW167-RG-picard_dups.log
Picard	DuplicationMetrics	MHW010-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW010-RG-picard_dups.log
Picard	DuplicationMetrics	MHW021-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW021-RG-picard_dups.log
Picard	DuplicationMetrics	MHW193-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW193-RG-picard_dups.log
Picard	DuplicationMetrics	MHW235-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW235-RG-picard_dups.log
Picard	DuplicationMetrics	MHW237-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW237-RG-picard_dups.log
Picard	DuplicationMetrics	MHW157-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW157-RG-picard_dups.log
Picard	DuplicationMetrics	MHW160-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW160-RG-picard_dups.log
Picard	DuplicationMetrics	MHW260-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW260-RG-picard_dups.log
Picard	DuplicationMetrics	MHW275-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW275-RG-picard_dups.log
Picard	DuplicationMetrics	MHW106-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW106-RG-picard_dups.log
Picard	DuplicationMetrics	MHW336-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW336-RG-picard_dups.log
Picard	DuplicationMetrics	MHW429-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW429-RG-picard_dups.log
Picard	DuplicationMetrics	MHW234-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW234-RG-picard_dups.log
Picard	DuplicationMetrics	MHW198-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW198-RG-picard_dups.log
Picard	DuplicationMetrics	MHW090-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW090-RG-picard_dups.log
Picard	DuplicationMetrics	MHW094-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW094-RG-picard_dups.log
Picard	DuplicationMetrics	MHW173-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW173-RG-picard_dups.log
Picard	DuplicationMetrics	MHW348-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW348-RG-picard_dups.log
Picard	DuplicationMetrics	MHW047-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW047-RG-picard_dups.log
Picard	DuplicationMetrics	MHW187-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW187-RG-picard_dups.log
Picard	DuplicationMetrics	MHW328-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW328-RG-picard_dups.log
Picard	DuplicationMetrics	MHW200-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW200-RG-picard_dups.log
Picard	DuplicationMetrics	MHW312-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW312-RG-picard_dups.log
Picard	DuplicationMetrics	MHW216-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW216-RG-picard_dups.log
Picard	DuplicationMetrics	MHW280-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW280-RG-picard_dups.log
Picard	DuplicationMetrics	MHW011-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW011-RG-picard_dups.log
Picard	DuplicationMetrics	MHW114-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW114-RG-picard_dups.log
Picard	DuplicationMetrics	MHW042-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW042-RG-picard_dups.log
Picard	DuplicationMetrics	MHW034-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW034-RG-picard_dups.log
Picard	DuplicationMetrics	MHW078-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW078-RG-picard_dups.log
Picard	DuplicationMetrics	MHW302-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW302-RG-picard_dups.log
Picard	DuplicationMetrics	MHW013-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW013-RG-picard_dups.log
Picard	DuplicationMetrics	MHW420-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW420-RG-picard_dups.log
Picard	DuplicationMetrics	MHW138-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW138-RG-picard_dups.log
Picard	DuplicationMetrics	MHW174-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW174-RG-picard_dups.log
Picard	DuplicationMetrics	MHW134-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW134-RG-picard_dups.log
Picard	DuplicationMetrics	MHW016-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW016-RG-picard_dups.log
Picard	DuplicationMetrics	MHW059-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW059-RG-picard_dups.log
Picard	DuplicationMetrics	MHW285-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW285-RG-picard_dups.log
Picard	DuplicationMetrics	MHW074-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW074-RG-picard_dups.log
Picard	DuplicationMetrics	MHW054-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW054-RG-picard_dups.log
Picard	DuplicationMetrics	MHW166-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW166-RG-picard_dups.log
Picard	DuplicationMetrics	MHW055-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW055-RG-picard_dups.log
Picard	DuplicationMetrics	MHW120-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW120-RG-picard_dups.log
Picard	DuplicationMetrics	MHW116-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW116-RG-picard_dups.log
Picard	DuplicationMetrics	MHW093-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW093-RG-picard_dups.log
Picard	DuplicationMetrics	MHW171-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW171-RG-picard_dups.log
Picard	DuplicationMetrics	MHW092-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW092-RG-picard_dups.log
Picard	DuplicationMetrics	MHW156-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW156-RG-picard_dups.log
Picard	DuplicationMetrics	MHW133-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW133-RG-picard_dups.log
Picard	DuplicationMetrics	MHW329-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW329-RG-picard_dups.log
Picard	DuplicationMetrics	MHW079-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW079-RG-picard_dups.log
Picard	DuplicationMetrics	MHW119-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW119-RG-picard_dups.log
Picard	DuplicationMetrics	MHW082-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW082-RG-picard_dups.log
Picard	DuplicationMetrics	MHW148-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW148-RG-picard_dups.log
Picard	DuplicationMetrics	MHW426-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW426-RG-picard_dups.log
Picard	DuplicationMetrics	MHW085-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW085-RG-picard_dups.log
Picard	DuplicationMetrics	MHW041-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW041-RG-picard_dups.log
Picard	DuplicationMetrics	MHW318-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW318-RG-picard_dups.log
Picard	DuplicationMetrics	MHW135-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW135-RG-picard_dups.log
Picard	DuplicationMetrics	MHW170-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW170-RG-picard_dups.log
Picard	DuplicationMetrics	MHW215-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW215-RG-picard_dups.log
Picard	DuplicationMetrics	MHW222-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW222-RG-picard_dups.log
Picard	DuplicationMetrics	MHW290-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW290-RG-picard_dups.log
Picard	DuplicationMetrics	MHW324-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW324-RG-picard_dups.log
Picard	DuplicationMetrics	MHW339-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW339-RG-picard_dups.log
Picard	DuplicationMetrics	MHW070-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW070-RG-picard_dups.log
Picard	DuplicationMetrics	MHW177-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW177-RG-picard_dups.log
Picard	DuplicationMetrics	MHW141-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW141-RG-picard_dups.log
Picard	DuplicationMetrics	MHW105-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW105-RG-picard_dups.log
Picard	DuplicationMetrics	MHW330-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW330-RG-picard_dups.log
Picard	DuplicationMetrics	MHW153-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW153-RG-picard_dups.log
Picard	DuplicationMetrics	MHW145-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW145-RG-picard_dups.log
Picard	DuplicationMetrics	MHW207-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW207-RG-picard_dups.log
Picard	DuplicationMetrics	MHW052-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW052-RG-picard_dups.log
Picard	DuplicationMetrics	MHW050-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW050-RG-picard_dups.log
Picard	DuplicationMetrics	MHW007-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW007-RG-picard_dups.log
Picard	DuplicationMetrics	MHW028-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW028-RG-picard_dups.log
Picard	DuplicationMetrics	MHW022-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW022-RG-picard_dups.log
Picard	DuplicationMetrics	MHW309-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW309-RG-picard_dups.log
Picard	DuplicationMetrics	MHW289-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW289-RG-picard_dups.log
Picard	DuplicationMetrics	MHW009-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW009-RG-picard_dups.log
Picard	DuplicationMetrics	MHW117-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW117-RG-picard_dups.log
Picard	DuplicationMetrics	MHW113-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW113-RG-picard_dups.log
Picard	DuplicationMetrics	MHW084-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW084-RG-picard_dups.log
Picard	DuplicationMetrics	MHW239-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW239-RG-picard_dups.log
Picard	DuplicationMetrics	MHW015-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW015-RG-picard_dups.log
Picard	DuplicationMetrics	MHW062-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW062-RG-picard_dups.log
Picard	DuplicationMetrics	MHW297-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW297-RG-picard_dups.log
Picard	DuplicationMetrics	MHW212-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW212-RG-picard_dups.log
Picard	DuplicationMetrics	MHW189-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW189-RG-picard_dups.log
Picard	DuplicationMetrics	MHW351-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW351-RG-picard_dups.log
Picard	DuplicationMetrics	MHW029-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW029-RG-picard_dups.log
Picard	DuplicationMetrics	MHW112-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW112-RG-picard_dups.log
Picard	DuplicationMetrics	MHW158-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW158-RG-picard_dups.log
Picard	DuplicationMetrics	MHW155-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW155-RG-picard_dups.log
Picard	DuplicationMetrics	MHW139-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW139-RG-picard_dups.log
Picard	DuplicationMetrics	MHW325-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW325-RG-picard_dups.log
Picard	DuplicationMetrics	MHW102-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW102-RG-picard_dups.log
Picard	DuplicationMetrics	MHW340-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW340-RG-picard_dups.log
Picard	DuplicationMetrics	MHW081-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW081-RG-picard_dups.log
Picard	DuplicationMetrics	MHW103-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW103-RG-picard_dups.log
Picard	DuplicationMetrics	MHW124-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW124-RG-picard_dups.log
Picard	DuplicationMetrics	MHW281-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW281-RG-picard_dups.log
Picard	DuplicationMetrics	MHW424-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW424-RG-picard_dups.log
Picard	DuplicationMetrics	MHW123-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW123-RG-picard_dups.log
Picard	DuplicationMetrics	MHW024-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW024-RG-picard_dups.log
Picard	DuplicationMetrics	MHW308-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW308-RG-picard_dups.log
Picard	DuplicationMetrics	MHW294-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW294-RG-picard_dups.log
Picard	DuplicationMetrics	MHW087-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW087-RG-picard_dups.log
Picard	DuplicationMetrics	MHW099-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW099-RG-picard_dups.log
Picard	DuplicationMetrics	MHW421-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW421-RG-picard_dups.log
Picard	DuplicationMetrics	MHW086-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW086-RG-picard_dups.log
Picard	DuplicationMetrics	MHW317-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW317-RG-picard_dups.log
Picard	DuplicationMetrics	MHW152-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW152-RG-picard_dups.log
Picard	DuplicationMetrics	MHW057-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW057-RG-picard_dups.log
Picard	DuplicationMetrics	MHW172-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW172-RG-picard_dups.log
Picard	DuplicationMetrics	MHW072-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW072-RG-picard_dups.log
Picard	DuplicationMetrics	MHW107-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW107-RG-picard_dups.log
Picard	DuplicationMetrics	MHW304-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW304-RG-picard_dups.log
Picard	DuplicationMetrics	MHW218-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW218-RG-picard_dups.log
Picard	DuplicationMetrics	MHW053-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW053-RG-picard_dups.log
Picard	DuplicationMetrics	MHW300-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW300-RG-picard_dups.log
Picard	DuplicationMetrics	MHW002-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW002-RG-picard_dups.log
Picard	DuplicationMetrics	MHW271-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW271-RG-picard_dups.log
Picard	DuplicationMetrics	MHW292-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW292-RG-picard_dups.log
Picard	DuplicationMetrics	MHW192-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW192-RG-picard_dups.log
Picard	DuplicationMetrics	MHW129-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW129-RG-picard_dups.log
Picard	DuplicationMetrics	MHW131-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW131-RG-picard_dups.log
Picard	DuplicationMetrics	MHW183-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW183-RG-picard_dups.log
Picard	DuplicationMetrics	MHW168-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW168-RG-picard_dups.log
Picard	DuplicationMetrics	MHW162-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW162-RG-picard_dups.log
Picard	DuplicationMetrics	MHW097-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW097-RG-picard_dups.log
Picard	DuplicationMetrics	MHW048-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW048-RG-picard_dups.log
Picard	DuplicationMetrics	MHW313-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW313-RG-picard_dups.log
Picard	DuplicationMetrics	MHW240-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW240-RG-picard_dups.log
Picard	DuplicationMetrics	MHW151-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW151-RG-picard_dups.log
Picard	DuplicationMetrics	MHW031-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW031-RG-picard_dups.log
Picard	DuplicationMetrics	MHW071-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW071-RG-picard_dups.log
Picard	DuplicationMetrics	MHW274-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW274-RG-picard_dups.log
Picard	DuplicationMetrics	MHW224-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW224-RG-picard_dups.log
Picard	DuplicationMetrics	MHW211-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW211-RG-picard_dups.log
Picard	DuplicationMetrics	MHW219-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW219-RG-picard_dups.log
Picard	DuplicationMetrics	MHW236-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW236-RG-picard_dups.log
Picard	DuplicationMetrics	MHW045-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW045-RG-picard_dups.log
Picard	DuplicationMetrics	MHW197-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW197-RG-picard_dups.log
Picard	DuplicationMetrics	MHW037-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW037-RG-picard_dups.log
Picard	DuplicationMetrics	MHW272-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW272-RG-picard_dups.log
Picard	DuplicationMetrics	MHW287-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW287-RG-picard_dups.log
Picard	DuplicationMetrics	MHW044-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW044-RG-picard_dups.log
Picard	DuplicationMetrics	MHW147-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW147-RG-picard_dups.log
Picard	DuplicationMetrics	MHW209-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW209-RG-picard_dups.log
Picard	DuplicationMetrics	MHW175-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW175-RG-picard_dups.log
Picard	DuplicationMetrics	MHW201-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW201-RG-picard_dups.log
Picard	DuplicationMetrics	MHW301-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW301-RG-picard_dups.log
Picard	DuplicationMetrics	MHW178-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW178-RG-picard_dups.log
Picard	DuplicationMetrics	MHW282-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW282-RG-picard_dups.log
Picard	DuplicationMetrics	MHW232-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW232-RG-picard_dups.log
Picard	DuplicationMetrics	MHW410-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW410-RG-picard_dups.log
Picard	DuplicationMetrics	MHW293-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW293-RG-picard_dups.log
Samtools	stats	MHW298-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW298-RG.sorted.bam.stats
Samtools	stats	MHW058-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW058-RG.sorted.bam.stats
Samtools	stats	MHW049-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW049-RG.sorted.bam.stats
Samtools	stats	MHW307-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW307-RG.sorted.bam.stats
Samtools	stats	MHW042-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW042-RG.sorted.bam.stats
Samtools	stats	MHW149-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW149-RG.sorted.bam.stats
Samtools	stats	MHW114-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW114-RG.sorted.bam.stats
Samtools	stats	MHW333-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW333-RG.sorted.bam.stats
Samtools	stats	MHW422-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW422-RG.sorted.bam.stats
Samtools	stats	MHW129-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW129-RG.sorted.bam.stats
Samtools	stats	MHW336-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW336-RG.sorted.bam.stats
Samtools	stats	MHW145-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW145-RG.sorted.bam.stats
Samtools	stats	MHW217-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW217-RG.sorted.bam.stats
Samtools	stats	MHW060-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW060-RG.sorted.bam.stats
Samtools	stats	MHW287-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW287-RG.sorted.bam.stats
Samtools	stats	MHW198-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW198-RG.sorted.bam.stats
Samtools	stats	MHW295-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW295-RG.sorted.bam.stats
Samtools	stats	MHW137-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW137-RG.sorted.bam.stats
Samtools	stats	MHW324-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW324-RG.sorted.bam.stats
Samtools	stats	MHW026-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW026-RG.sorted.bam.stats
Samtools	stats	MHW068-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW068-RG.sorted.bam.stats
Samtools	stats	MHW032-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW032-RG.sorted.bam.stats
Samtools	stats	MHW150-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW150-RG.sorted.bam.stats
Samtools	stats	MHW059-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW059-RG.sorted.bam.stats
Samtools	stats	MHW188-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW188-RG.sorted.bam.stats
Samtools	stats	MHW124-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW124-RG.sorted.bam.stats
Samtools	stats	MHW081-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW081-RG.sorted.bam.stats
Samtools	stats	MHW176-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW176-RG.sorted.bam.stats
Samtools	stats	MHW206-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW206-RG.sorted.bam.stats
Samtools	stats	MHW427-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW427-RG.sorted.bam.stats
Samtools	stats	MHW215-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW215-RG.sorted.bam.stats
Samtools	stats	MHW240-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW240-RG.sorted.bam.stats
Samtools	stats	MHW071-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW071-RG.sorted.bam.stats
Samtools	stats	MHW092-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW092-RG.sorted.bam.stats
Samtools	stats	MHW234-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW234-RG.sorted.bam.stats
Samtools	stats	MHW225-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW225-RG.sorted.bam.stats
Samtools	stats	MHW265-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW265-RG.sorted.bam.stats
Samtools	stats	MHW075-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW075-RG.sorted.bam.stats
Samtools	stats	MHW285-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW285-RG.sorted.bam.stats
Samtools	stats	MHW338-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW338-RG.sorted.bam.stats
Samtools	stats	MHW052-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW052-RG.sorted.bam.stats
Samtools	stats	MHW087-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW087-RG.sorted.bam.stats
Samtools	stats	MHW047-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW047-RG.sorted.bam.stats
Samtools	stats	MHW033-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW033-RG.sorted.bam.stats
Samtools	stats	MHW239-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW239-RG.sorted.bam.stats
Samtools	stats	MHW426-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW426-RG.sorted.bam.stats
Samtools	stats	MHW180-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW180-RG.sorted.bam.stats
Samtools	stats	MHW100-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW100-RG.sorted.bam.stats
Samtools	stats	MHW066-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW066-RG.sorted.bam.stats
Samtools	stats	MHW035-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW035-RG.sorted.bam.stats
Samtools	stats	MHW108-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW108-RG.sorted.bam.stats
Samtools	stats	MHW230-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW230-RG.sorted.bam.stats
Samtools	stats	MHW134-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW134-RG.sorted.bam.stats
Samtools	stats	MHW197-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW197-RG.sorted.bam.stats
Samtools	stats	MHW204-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW204-RG.sorted.bam.stats
Samtools	stats	MHW200-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW200-RG.sorted.bam.stats
Samtools	stats	MHW039-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW039-RG.sorted.bam.stats
Samtools	stats	MHW270-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW270-RG.sorted.bam.stats
Samtools	stats	MHW013-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW013-RG.sorted.bam.stats
Samtools	stats	MHW040-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW040-RG.sorted.bam.stats
Samtools	stats	MHW304-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW304-RG.sorted.bam.stats
Samtools	stats	MHW004-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW004-RG.sorted.bam.stats
Samtools	stats	MHW313-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW313-RG.sorted.bam.stats
Samtools	stats	MHW326-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW326-RG.sorted.bam.stats
Samtools	stats	MHW104-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW104-RG.sorted.bam.stats
Samtools	stats	MHW090-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW090-RG.sorted.bam.stats
Samtools	stats	MHW077-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW077-RG.sorted.bam.stats
Samtools	stats	MHW165-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW165-RG.sorted.bam.stats
Samtools	stats	MHW291-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW291-RG.sorted.bam.stats
Samtools	stats	MHW063-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW063-RG.sorted.bam.stats
Samtools	stats	MHW007-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW007-RG.sorted.bam.stats
Samtools	stats	MHW237-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW237-RG.sorted.bam.stats
Samtools	stats	MHW351-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW351-RG.sorted.bam.stats
Samtools	stats	MHW284-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW284-RG.sorted.bam.stats
Samtools	stats	MHW278-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW278-RG.sorted.bam.stats
Samtools	stats	MHW085-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW085-RG.sorted.bam.stats
Samtools	stats	MHW349-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW349-RG.sorted.bam.stats
Samtools	stats	MHW014-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW014-RG.sorted.bam.stats
Samtools	stats	MHW146-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW146-RG.sorted.bam.stats
Samtools	stats	MHW196-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW196-RG.sorted.bam.stats
Samtools	stats	MHW029-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW029-RG.sorted.bam.stats
Samtools	stats	MHW223-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW223-RG.sorted.bam.stats
Samtools	stats	MHW065-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW065-RG.sorted.bam.stats
Samtools	stats	MHW238-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW238-RG.sorted.bam.stats
Samtools	stats	MHW289-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW289-RG.sorted.bam.stats
Samtools	stats	MHW293-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW293-RG.sorted.bam.stats
Samtools	stats	MHW038-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW038-RG.sorted.bam.stats
Samtools	stats	MHW218-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW218-RG.sorted.bam.stats
Samtools	stats	MHW316-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW316-RG.sorted.bam.stats
Samtools	stats	MHW125-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW125-RG.sorted.bam.stats
Samtools	stats	MHW199-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW199-RG.sorted.bam.stats
Samtools	stats	MHW116-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW116-RG.sorted.bam.stats
Samtools	stats	MHW069-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW069-RG.sorted.bam.stats
Samtools	stats	MHW151-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW151-RG.sorted.bam.stats
Samtools	stats	MHW419-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW419-RG.sorted.bam.stats
Samtools	stats	MHW341-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW341-RG.sorted.bam.stats
Samtools	stats	MHW072-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW072-RG.sorted.bam.stats
Samtools	stats	MHW109-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW109-RG.sorted.bam.stats
Samtools	stats	MHW019-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW019-RG.sorted.bam.stats
Samtools	stats	MHW241-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW241-RG.sorted.bam.stats
Samtools	stats	MHW235-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW235-RG.sorted.bam.stats
Samtools	stats	MHW009-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW009-RG.sorted.bam.stats
Samtools	stats	MHW054-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW054-RG.sorted.bam.stats
Samtools	stats	MHW348-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW348-RG.sorted.bam.stats
Samtools	stats	MHW051-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW051-RG.sorted.bam.stats
Samtools	stats	MHW016-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW016-RG.sorted.bam.stats
Samtools	stats	MHW031-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW031-RG.sorted.bam.stats
Samtools	stats	MHW314-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW314-RG.sorted.bam.stats
Samtools	stats	MHW045-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW045-RG.sorted.bam.stats
Samtools	stats	MHW157-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW157-RG.sorted.bam.stats
Samtools	stats	MHW166-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW166-RG.sorted.bam.stats
Samtools	stats	MHW153-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW153-RG.sorted.bam.stats
Samtools	stats	MHW070-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW070-RG.sorted.bam.stats
Samtools	stats	MHW185-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW185-RG.sorted.bam.stats
Samtools	stats	MHW342-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW342-RG.sorted.bam.stats
Samtools	stats	MHW027-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW027-RG.sorted.bam.stats
Samtools	stats	MHW213-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW213-RG.sorted.bam.stats
Samtools	stats	MHW132-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW132-RG.sorted.bam.stats
Samtools	stats	MHW432-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW432-RG.sorted.bam.stats
Samtools	stats	MHW328-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW328-RG.sorted.bam.stats
Samtools	stats	MHW015-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW015-RG.sorted.bam.stats
Samtools	stats	MHW191-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW191-RG.sorted.bam.stats
Samtools	stats	MHW119-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW119-RG.sorted.bam.stats
Samtools	stats	MHW123-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW123-RG.sorted.bam.stats
Samtools	stats	MHW425-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW425-RG.sorted.bam.stats
Samtools	stats	MHW107-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW107-RG.sorted.bam.stats
Samtools	stats	MHW258-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW258-RG.sorted.bam.stats
Samtools	stats	MHW184-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW184-RG.sorted.bam.stats
Samtools	stats	MHW143-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW143-RG.sorted.bam.stats
Samtools	stats	MHW187-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW187-RG.sorted.bam.stats
Samtools	stats	MHW086-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW086-RG.sorted.bam.stats
Samtools	stats	MHW424-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW424-RG.sorted.bam.stats
Samtools	stats	MHW306-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW306-RG.sorted.bam.stats
Samtools	stats	MHW003-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW003-RG.sorted.bam.stats
Samtools	stats	MHW190-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW190-RG.sorted.bam.stats
Samtools	stats	MHW343-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW343-RG.sorted.bam.stats
Samtools	stats	MHW138-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW138-RG.sorted.bam.stats
Samtools	stats	MHW312-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW312-RG.sorted.bam.stats
Samtools	stats	MHW407-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW407-RG.sorted.bam.stats
Samtools	stats	MHW172-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW172-RG.sorted.bam.stats
Samtools	stats	MHW226-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW226-RG.sorted.bam.stats
Samtools	stats	MHW112-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW112-RG.sorted.bam.stats
Samtools	stats	MHW174-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW174-RG.sorted.bam.stats
Samtools	stats	MHW195-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW195-RG.sorted.bam.stats
Samtools	stats	MHW352-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW352-RG.sorted.bam.stats
Samtools	stats	MHW231-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW231-RG.sorted.bam.stats
Samtools	stats	MHW098-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW098-RG.sorted.bam.stats
Samtools	stats	MHW078-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW078-RG.sorted.bam.stats
Samtools	stats	MHW011-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW011-RG.sorted.bam.stats
Samtools	stats	MHW091-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW091-RG.sorted.bam.stats
Samtools	stats	MHW171-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW171-RG.sorted.bam.stats
Samtools	stats	MHW023-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW023-RG.sorted.bam.stats
Samtools	stats	MHW183-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW183-RG.sorted.bam.stats
Samtools	stats	MHW133-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW133-RG.sorted.bam.stats
Samtools	stats	MHW082-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW082-RG.sorted.bam.stats
Samtools	stats	MHW156-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW156-RG.sorted.bam.stats
Samtools	stats	MHW055-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW055-RG.sorted.bam.stats
Samtools	stats	MHW093-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW093-RG.sorted.bam.stats
Samtools	stats	MHW170-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW170-RG.sorted.bam.stats
Samtools	stats	MHW140-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW140-RG.sorted.bam.stats
Samtools	stats	MHW303-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW303-RG.sorted.bam.stats
Samtools	stats	MHW012-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW012-RG.sorted.bam.stats
Samtools	stats	MHW320-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW320-RG.sorted.bam.stats
Samtools	stats	MHW008-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW008-RG.sorted.bam.stats
Samtools	stats	MHW162-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW162-RG.sorted.bam.stats
Samtools	stats	MHW296-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW296-RG.sorted.bam.stats
Samtools	stats	MHW330-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW330-RG.sorted.bam.stats
Samtools	stats	MHW046-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW046-RG.sorted.bam.stats
Samtools	stats	MHW311-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW311-RG.sorted.bam.stats
Samtools	stats	MHW064-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW064-RG.sorted.bam.stats
Samtools	stats	MHW164-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW164-RG.sorted.bam.stats
Samtools	stats	MHW041-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW041-RG.sorted.bam.stats
Samtools	stats	MHW275-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW275-RG.sorted.bam.stats
Samtools	stats	MHW160-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW160-RG.sorted.bam.stats
Samtools	stats	MHW305-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW305-RG.sorted.bam.stats
Samtools	stats	MHW232-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW232-RG.sorted.bam.stats
Samtools	stats	MHW228-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW228-RG.sorted.bam.stats
Samtools	stats	MHW327-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW327-RG.sorted.bam.stats
Samtools	stats	MHW152-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW152-RG.sorted.bam.stats
Samtools	stats	MHW274-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW274-RG.sorted.bam.stats
Samtools	stats	MHW148-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW148-RG.sorted.bam.stats
Samtools	stats	MHW178-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW178-RG.sorted.bam.stats
Samtools	stats	MHW017-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW017-RG.sorted.bam.stats
Samtools	stats	MHW297-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW297-RG.sorted.bam.stats
Samtools	stats	MHW101-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW101-RG.sorted.bam.stats
Samtools	stats	MHW192-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW192-RG.sorted.bam.stats
Samtools	stats	MHW236-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW236-RG.sorted.bam.stats
Samtools	stats	MHW279-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW279-RG.sorted.bam.stats
Samtools	stats	MHW002-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW002-RG.sorted.bam.stats
Samtools	stats	MHW186-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW186-RG.sorted.bam.stats
Samtools	stats	MHW105-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW105-RG.sorted.bam.stats
Samtools	stats	MHW173-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW173-RG.sorted.bam.stats
Samtools	stats	MHW210-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW210-RG.sorted.bam.stats
Samtools	stats	MHW224-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW224-RG.sorted.bam.stats
Samtools	stats	MHW179-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW179-RG.sorted.bam.stats
Samtools	stats	MHW083-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW083-RG.sorted.bam.stats
Samtools	stats	MHW203-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW203-RG.sorted.bam.stats
Samtools	stats	MHW288-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW288-RG.sorted.bam.stats
Samtools	stats	MHW283-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW283-RG.sorted.bam.stats
Samtools	stats	MHW337-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW337-RG.sorted.bam.stats
Samtools	stats	MHW208-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW208-RG.sorted.bam.stats
Samtools	stats	MHW118-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW118-RG.sorted.bam.stats
Samtools	stats	MHW227-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW227-RG.sorted.bam.stats
Samtools	stats	MHW315-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW315-RG.sorted.bam.stats
Samtools	stats	MHW020-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW020-RG.sorted.bam.stats
Samtools	stats	MHW177-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW177-RG.sorted.bam.stats
Samtools	stats	MHW099-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW099-RG.sorted.bam.stats
Samtools	stats	MHW141-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW141-RG.sorted.bam.stats
Samtools	stats	MHW260-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW260-RG.sorted.bam.stats
Samtools	stats	MHW329-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW329-RG.sorted.bam.stats
Samtools	stats	MHW113-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW113-RG.sorted.bam.stats
Samtools	stats	MHW319-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW319-RG.sorted.bam.stats
Samtools	stats	MHW076-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW076-RG.sorted.bam.stats
Samtools	stats	MHW158-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW158-RG.sorted.bam.stats
Samtools	stats	MHW073-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW073-RG.sorted.bam.stats
Samtools	stats	MHW268-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW268-RG.sorted.bam.stats
Samtools	stats	MHW222-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW222-RG.sorted.bam.stats
Samtools	stats	MHW322-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW322-RG.sorted.bam.stats
Samtools	stats	MHW128-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW128-RG.sorted.bam.stats
Samtools	stats	MHW410-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW410-RG.sorted.bam.stats
Samtools	stats	MHW096-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW096-RG.sorted.bam.stats
Samtools	stats	MHW136-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW136-RG.sorted.bam.stats
Samtools	stats	MHW122-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW122-RG.sorted.bam.stats
Samtools	stats	MHW163-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW163-RG.sorted.bam.stats
Samtools	stats	MHW194-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW194-RG.sorted.bam.stats
Samtools	stats	MHW339-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW339-RG.sorted.bam.stats
Samtools	stats	MHW115-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW115-RG.sorted.bam.stats
Samtools	stats	MHW036-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW036-RG.sorted.bam.stats
Samtools	stats	MHW102-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW102-RG.sorted.bam.stats
Samtools	stats	MHW024-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW024-RG.sorted.bam.stats
Samtools	stats	MHW135-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW135-RG.sorted.bam.stats
Samtools	stats	MHW005-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW005-RG.sorted.bam.stats
Samtools	stats	MHW094-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW094-RG.sorted.bam.stats
Samtools	stats	MHW097-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW097-RG.sorted.bam.stats
Samtools	stats	MHW057-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW057-RG.sorted.bam.stats
Samtools	stats	MHW309-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW309-RG.sorted.bam.stats
Samtools	stats	MHW302-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW302-RG.sorted.bam.stats
Samtools	stats	MHW272-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW272-RG.sorted.bam.stats
Samtools	stats	MHW062-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW062-RG.sorted.bam.stats
Samtools	stats	MHW286-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW286-RG.sorted.bam.stats
Samtools	stats	MHW126-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW126-RG.sorted.bam.stats
Samtools	stats	MHW056-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW056-RG.sorted.bam.stats
Samtools	stats	MHW321-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW321-RG.sorted.bam.stats
Samtools	stats	MHW127-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW127-RG.sorted.bam.stats
Samtools	stats	MHW207-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW207-RG.sorted.bam.stats
Samtools	stats	MHW323-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW323-RG.sorted.bam.stats
Samtools	stats	MHW139-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW139-RG.sorted.bam.stats
Samtools	stats	MHW131-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW131-RG.sorted.bam.stats
Samtools	stats	MHW300-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW300-RG.sorted.bam.stats
Samtools	stats	MHW120-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW120-RG.sorted.bam.stats
Samtools	stats	MHW294-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW294-RG.sorted.bam.stats
Samtools	stats	MHW273-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW273-RG.sorted.bam.stats
Samtools	stats	MHW154-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW154-RG.sorted.bam.stats
Samtools	stats	MHW018-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW018-RG.sorted.bam.stats
Samtools	stats	MHW155-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW155-RG.sorted.bam.stats
Samtools	stats	MHW271-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW271-RG.sorted.bam.stats
Samtools	stats	MHW103-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW103-RG.sorted.bam.stats
Samtools	stats	MHW431-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW431-RG.sorted.bam.stats
Samtools	stats	MHW095-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW095-RG.sorted.bam.stats
Samtools	stats	MHW282-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW282-RG.sorted.bam.stats
Samtools	stats	MHW193-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW193-RG.sorted.bam.stats
Samtools	stats	MHW001-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW001-RG.sorted.bam.stats
Samtools	stats	MHW159-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW159-RG.sorted.bam.stats
Samtools	stats	MHW429-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW429-RG.sorted.bam.stats
Samtools	stats	MHW037-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW037-RG.sorted.bam.stats
Samtools	stats	MHW350-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW350-RG.sorted.bam.stats
Samtools	stats	MHW263-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW263-RG.sorted.bam.stats
Samtools	stats	MHW147-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW147-RG.sorted.bam.stats
Samtools	stats	MHW335-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW335-RG.sorted.bam.stats
Samtools	stats	MHW142-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW142-RG.sorted.bam.stats
Samtools	stats	MHW181-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW181-RG.sorted.bam.stats
Samtools	stats	MHW117-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW117-RG.sorted.bam.stats
Samtools	stats	MHW216-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW216-RG.sorted.bam.stats
Samtools	stats	MHW276-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW276-RG.sorted.bam.stats
Samtools	stats	MHW043-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW043-RG.sorted.bam.stats
Samtools	stats	MHW106-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW106-RG.sorted.bam.stats
Samtools	stats	MHW267-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW267-RG.sorted.bam.stats
Samtools	stats	MHW021-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW021-RG.sorted.bam.stats
Samtools	stats	MHW167-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW167-RG.sorted.bam.stats
Samtools	stats	MHW325-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW325-RG.sorted.bam.stats
Samtools	stats	MHW175-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW175-RG.sorted.bam.stats
Samtools	stats	MHW080-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW080-RG.sorted.bam.stats
Samtools	stats	MHW088-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW088-RG.sorted.bam.stats
Samtools	stats	MHW053-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW053-RG.sorted.bam.stats
Samtools	stats	MHW074-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW074-RG.sorted.bam.stats
Samtools	stats	MHW219-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW219-RG.sorted.bam.stats
Samtools	stats	MHW317-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW317-RG.sorted.bam.stats
Samtools	stats	MHW310-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW310-RG.sorted.bam.stats
Samtools	stats	MHW421-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW421-RG.sorted.bam.stats
Samtools	stats	MHW061-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW061-RG.sorted.bam.stats
Samtools	stats	MHW334-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW334-RG.sorted.bam.stats
Samtools	stats	MHW089-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW089-RG.sorted.bam.stats
Samtools	stats	MHW110-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW110-RG.sorted.bam.stats
Samtools	stats	MHW340-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW340-RG.sorted.bam.stats
Samtools	stats	MHW044-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW044-RG.sorted.bam.stats
Samtools	stats	MHW050-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW050-RG.sorted.bam.stats
Samtools	stats	MHW079-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW079-RG.sorted.bam.stats
Samtools	stats	MHW211-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW211-RG.sorted.bam.stats
Samtools	stats	MHW030-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW030-RG.sorted.bam.stats
Samtools	stats	MHW345-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW345-RG.sorted.bam.stats
Samtools	stats	MHW331-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW331-RG.sorted.bam.stats
Samtools	stats	MHW168-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW168-RG.sorted.bam.stats
Samtools	stats	MHW299-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW299-RG.sorted.bam.stats
Samtools	stats	MHW111-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW111-RG.sorted.bam.stats
Samtools	stats	MHW048-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW048-RG.sorted.bam.stats
Samtools	stats	MHW332-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW332-RG.sorted.bam.stats
Samtools	stats	MHW161-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW161-RG.sorted.bam.stats
Samtools	stats	MHW280-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW280-RG.sorted.bam.stats
Samtools	stats	MHW221-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW221-RG.sorted.bam.stats
Samtools	stats	MHW420-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW420-RG.sorted.bam.stats
Samtools	stats	MHW169-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW169-RG.sorted.bam.stats
Samtools	stats	MHW201-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW201-RG.sorted.bam.stats
Samtools	stats	MHW006-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW006-RG.sorted.bam.stats
Samtools	stats	MHW182-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW182-RG.sorted.bam.stats
Samtools	stats	MHW025-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW025-RG.sorted.bam.stats
Samtools	stats	MHW318-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW318-RG.sorted.bam.stats
Samtools	stats	MHW130-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW130-RG.sorted.bam.stats
Samtools	stats	MHW269-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW269-RG.sorted.bam.stats
Samtools	stats	MHW220-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW220-RG.sorted.bam.stats
Samtools	stats	MHW353-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW353-RG.sorted.bam.stats
Samtools	stats	MHW022-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW022-RG.sorted.bam.stats
Samtools	stats	MHW301-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW301-RG.sorted.bam.stats
Samtools	stats	MHW121-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW121-RG.sorted.bam.stats
Samtools	stats	MHW308-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW308-RG.sorted.bam.stats
Samtools	stats	MHW233-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW233-RG.sorted.bam.stats
Samtools	stats	MHW292-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW292-RG.sorted.bam.stats
Samtools	stats	MHW212-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW212-RG.sorted.bam.stats
Samtools	stats	MHW344-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW344-RG.sorted.bam.stats
Samtools	stats	MHW202-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW202-RG.sorted.bam.stats
Samtools	stats	MHW277-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW277-RG.sorted.bam.stats
Samtools	stats	MHW205-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW205-RG.sorted.bam.stats
Samtools	stats	MHW214-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW214-RG.sorted.bam.stats
Samtools	stats	MHW209-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW209-RG.sorted.bam.stats
Samtools	stats	MHW229-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW229-RG.sorted.bam.stats
Samtools	stats	MHW028-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW028-RG.sorted.bam.stats
Samtools	stats	MHW290-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW290-RG.sorted.bam.stats
Samtools	stats	MHW084-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW084-RG.sorted.bam.stats
Samtools	stats	MHW281-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW281-RG.sorted.bam.stats
Samtools	stats	MHW347-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW347-RG.sorted.bam.stats
Samtools	stats	MHW189-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW189-RG.sorted.bam.stats
Samtools	stats	MHW010-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW010-RG.sorted.bam.stats
Samtools	stats	MHW067-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW067-RG.sorted.bam.stats
Samtools	stats	MHW034-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW034-RG.sorted.bam.stats
Samtools	stats	MHW144-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW144-RG.sorted.bam.stats
Samtools	flagstat	MHW018-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW018-RG.sorted.bam.flagstat
Samtools	flagstat	MHW074-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW074-RG.sorted.bam.flagstat
Samtools	flagstat	MHW108-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW108-RG.sorted.bam.flagstat
Samtools	flagstat	MHW151-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW151-RG.sorted.bam.flagstat
Samtools	flagstat	MHW305-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW305-RG.sorted.bam.flagstat
Samtools	flagstat	MHW311-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW311-RG.sorted.bam.flagstat
Samtools	flagstat	MHW263-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW263-RG.sorted.bam.flagstat
Samtools	flagstat	MHW027-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW027-RG.sorted.bam.flagstat
Samtools	flagstat	MHW010-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW010-RG.sorted.bam.flagstat
Samtools	flagstat	MHW094-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW094-RG.sorted.bam.flagstat
Samtools	flagstat	MHW194-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW194-RG.sorted.bam.flagstat
Samtools	flagstat	MHW230-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW230-RG.sorted.bam.flagstat
Samtools	flagstat	MHW217-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW217-RG.sorted.bam.flagstat
Samtools	flagstat	MHW096-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW096-RG.sorted.bam.flagstat
Samtools	flagstat	MHW318-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW318-RG.sorted.bam.flagstat
Samtools	flagstat	MHW030-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW030-RG.sorted.bam.flagstat
Samtools	flagstat	MHW020-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW020-RG.sorted.bam.flagstat
Samtools	flagstat	MHW006-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW006-RG.sorted.bam.flagstat
Samtools	flagstat	MHW119-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW119-RG.sorted.bam.flagstat
Samtools	flagstat	MHW091-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW091-RG.sorted.bam.flagstat
Samtools	flagstat	MHW181-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW181-RG.sorted.bam.flagstat
Samtools	flagstat	MHW054-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW054-RG.sorted.bam.flagstat
Samtools	flagstat	MHW306-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW306-RG.sorted.bam.flagstat
Samtools	flagstat	MHW162-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW162-RG.sorted.bam.flagstat
Samtools	flagstat	MHW432-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW432-RG.sorted.bam.flagstat
Samtools	flagstat	MHW163-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW163-RG.sorted.bam.flagstat
Samtools	flagstat	MHW048-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW048-RG.sorted.bam.flagstat
Samtools	flagstat	MHW133-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW133-RG.sorted.bam.flagstat
Samtools	flagstat	MHW235-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW235-RG.sorted.bam.flagstat
Samtools	flagstat	MHW017-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW017-RG.sorted.bam.flagstat
Samtools	flagstat	MHW196-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW196-RG.sorted.bam.flagstat
Samtools	flagstat	MHW037-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW037-RG.sorted.bam.flagstat
Samtools	flagstat	MHW077-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW077-RG.sorted.bam.flagstat
Samtools	flagstat	MHW198-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW198-RG.sorted.bam.flagstat
Samtools	flagstat	MHW154-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW154-RG.sorted.bam.flagstat
Samtools	flagstat	MHW317-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW317-RG.sorted.bam.flagstat
Samtools	flagstat	MHW224-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW224-RG.sorted.bam.flagstat
Samtools	flagstat	MHW207-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW207-RG.sorted.bam.flagstat
Samtools	flagstat	MHW002-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW002-RG.sorted.bam.flagstat
Samtools	flagstat	MHW083-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW083-RG.sorted.bam.flagstat
Samtools	flagstat	MHW152-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW152-RG.sorted.bam.flagstat
Samtools	flagstat	MHW145-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW145-RG.sorted.bam.flagstat
Samtools	flagstat	MHW299-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW299-RG.sorted.bam.flagstat
Samtools	flagstat	MHW277-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW277-RG.sorted.bam.flagstat
Samtools	flagstat	MHW057-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW057-RG.sorted.bam.flagstat
Samtools	flagstat	MHW170-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW170-RG.sorted.bam.flagstat
Samtools	flagstat	MHW335-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW335-RG.sorted.bam.flagstat
Samtools	flagstat	MHW315-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW315-RG.sorted.bam.flagstat
Samtools	flagstat	MHW061-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW061-RG.sorted.bam.flagstat
Samtools	flagstat	MHW226-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW226-RG.sorted.bam.flagstat
Samtools	flagstat	MHW134-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW134-RG.sorted.bam.flagstat
Samtools	flagstat	MHW236-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW236-RG.sorted.bam.flagstat
Samtools	flagstat	MHW287-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW287-RG.sorted.bam.flagstat
Samtools	flagstat	MHW213-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW213-RG.sorted.bam.flagstat
Samtools	flagstat	MHW302-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW302-RG.sorted.bam.flagstat
Samtools	flagstat	MHW104-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW104-RG.sorted.bam.flagstat
Samtools	flagstat	MHW210-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW210-RG.sorted.bam.flagstat
Samtools	flagstat	MHW179-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW179-RG.sorted.bam.flagstat
Samtools	flagstat	MHW078-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW078-RG.sorted.bam.flagstat
Samtools	flagstat	MHW191-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW191-RG.sorted.bam.flagstat
Samtools	flagstat	MHW300-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW300-RG.sorted.bam.flagstat
Samtools	flagstat	MHW043-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW043-RG.sorted.bam.flagstat
Samtools	flagstat	MHW241-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW241-RG.sorted.bam.flagstat
Samtools	flagstat	MHW005-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW005-RG.sorted.bam.flagstat
Samtools	flagstat	MHW003-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW003-RG.sorted.bam.flagstat
Samtools	flagstat	MHW183-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW183-RG.sorted.bam.flagstat
Samtools	flagstat	MHW319-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW319-RG.sorted.bam.flagstat
Samtools	flagstat	MHW295-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW295-RG.sorted.bam.flagstat
Samtools	flagstat	MHW234-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW234-RG.sorted.bam.flagstat
Samtools	flagstat	MHW301-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW301-RG.sorted.bam.flagstat
Samtools	flagstat	MHW278-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW278-RG.sorted.bam.flagstat
Samtools	flagstat	MHW034-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW034-RG.sorted.bam.flagstat
Samtools	flagstat	MHW331-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW331-RG.sorted.bam.flagstat
Samtools	flagstat	MHW205-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW205-RG.sorted.bam.flagstat
Samtools	flagstat	MHW223-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW223-RG.sorted.bam.flagstat
Samtools	flagstat	MHW285-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW285-RG.sorted.bam.flagstat
Samtools	flagstat	MHW338-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW338-RG.sorted.bam.flagstat
Samtools	flagstat	MHW323-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW323-RG.sorted.bam.flagstat
Samtools	flagstat	MHW070-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW070-RG.sorted.bam.flagstat
Samtools	flagstat	MHW110-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW110-RG.sorted.bam.flagstat
Samtools	flagstat	MHW023-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW023-RG.sorted.bam.flagstat
Samtools	flagstat	MHW233-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW233-RG.sorted.bam.flagstat
Samtools	flagstat	MHW081-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW081-RG.sorted.bam.flagstat
Samtools	flagstat	MHW114-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW114-RG.sorted.bam.flagstat
Samtools	flagstat	MHW169-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW169-RG.sorted.bam.flagstat
Samtools	flagstat	MHW268-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW268-RG.sorted.bam.flagstat
Samtools	flagstat	MHW313-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW313-RG.sorted.bam.flagstat
Samtools	flagstat	MHW333-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW333-RG.sorted.bam.flagstat
Samtools	flagstat	MHW199-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW199-RG.sorted.bam.flagstat
Samtools	flagstat	MHW103-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW103-RG.sorted.bam.flagstat
Samtools	flagstat	MHW124-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW124-RG.sorted.bam.flagstat
Samtools	flagstat	MHW111-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW111-RG.sorted.bam.flagstat
Samtools	flagstat	MHW031-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW031-RG.sorted.bam.flagstat
Samtools	flagstat	MHW001-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW001-RG.sorted.bam.flagstat
Samtools	flagstat	MHW308-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW308-RG.sorted.bam.flagstat
Samtools	flagstat	MHW304-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW304-RG.sorted.bam.flagstat
Samtools	flagstat	MHW192-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW192-RG.sorted.bam.flagstat
Samtools	flagstat	MHW286-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW286-RG.sorted.bam.flagstat
Samtools	flagstat	MHW218-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW218-RG.sorted.bam.flagstat
Samtools	flagstat	MHW296-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW296-RG.sorted.bam.flagstat
Samtools	flagstat	MHW014-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW014-RG.sorted.bam.flagstat
Samtools	flagstat	MHW139-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW139-RG.sorted.bam.flagstat
Samtools	flagstat	MHW153-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW153-RG.sorted.bam.flagstat
Samtools	flagstat	MHW160-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW160-RG.sorted.bam.flagstat
Samtools	flagstat	MHW063-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW063-RG.sorted.bam.flagstat
Samtools	flagstat	MHW239-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW239-RG.sorted.bam.flagstat
Samtools	flagstat	MHW069-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW069-RG.sorted.bam.flagstat
Samtools	flagstat	MHW071-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW071-RG.sorted.bam.flagstat
Samtools	flagstat	MHW291-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW291-RG.sorted.bam.flagstat
Samtools	flagstat	MHW032-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW032-RG.sorted.bam.flagstat
Samtools	flagstat	MHW050-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW050-RG.sorted.bam.flagstat
Samtools	flagstat	MHW289-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW289-RG.sorted.bam.flagstat
Samtools	flagstat	MHW046-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW046-RG.sorted.bam.flagstat
Samtools	flagstat	MHW227-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW227-RG.sorted.bam.flagstat
Samtools	flagstat	MHW238-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW238-RG.sorted.bam.flagstat
Samtools	flagstat	MHW212-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW212-RG.sorted.bam.flagstat
Samtools	flagstat	MHW221-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW221-RG.sorted.bam.flagstat
Samtools	flagstat	MHW140-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW140-RG.sorted.bam.flagstat
Samtools	flagstat	MHW136-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW136-RG.sorted.bam.flagstat
Samtools	flagstat	MHW045-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW045-RG.sorted.bam.flagstat
Samtools	flagstat	MHW132-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW132-RG.sorted.bam.flagstat
Samtools	flagstat	MHW349-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW349-RG.sorted.bam.flagstat
Samtools	flagstat	MHW068-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW068-RG.sorted.bam.flagstat
Samtools	flagstat	MHW093-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW093-RG.sorted.bam.flagstat
Samtools	flagstat	MHW188-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW188-RG.sorted.bam.flagstat
Samtools	flagstat	MHW200-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW200-RG.sorted.bam.flagstat
Samtools	flagstat	MHW118-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW118-RG.sorted.bam.flagstat
Samtools	flagstat	MHW316-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW316-RG.sorted.bam.flagstat
Samtools	flagstat	MHW427-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW427-RG.sorted.bam.flagstat
Samtools	flagstat	MHW176-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW176-RG.sorted.bam.flagstat
Samtools	flagstat	MHW320-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW320-RG.sorted.bam.flagstat
Samtools	flagstat	MHW197-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW197-RG.sorted.bam.flagstat
Samtools	flagstat	MHW004-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW004-RG.sorted.bam.flagstat
Samtools	flagstat	MHW214-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW214-RG.sorted.bam.flagstat
Samtools	flagstat	MHW283-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW283-RG.sorted.bam.flagstat
Samtools	flagstat	MHW337-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW337-RG.sorted.bam.flagstat
Samtools	flagstat	MHW149-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW149-RG.sorted.bam.flagstat
Samtools	flagstat	MHW008-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW008-RG.sorted.bam.flagstat
Samtools	flagstat	MHW180-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW180-RG.sorted.bam.flagstat
Samtools	flagstat	MHW424-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW424-RG.sorted.bam.flagstat
Samtools	flagstat	MHW336-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW336-RG.sorted.bam.flagstat
Samtools	flagstat	MHW098-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW098-RG.sorted.bam.flagstat
Samtools	flagstat	MHW127-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW127-RG.sorted.bam.flagstat
Samtools	flagstat	MHW267-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW267-RG.sorted.bam.flagstat
Samtools	flagstat	MHW420-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW420-RG.sorted.bam.flagstat
Samtools	flagstat	MHW150-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW150-RG.sorted.bam.flagstat
Samtools	flagstat	MHW290-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW290-RG.sorted.bam.flagstat
Samtools	flagstat	MHW126-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW126-RG.sorted.bam.flagstat
Samtools	flagstat	MHW297-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW297-RG.sorted.bam.flagstat
Samtools	flagstat	MHW429-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW429-RG.sorted.bam.flagstat
Samtools	flagstat	MHW095-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW095-RG.sorted.bam.flagstat
Samtools	flagstat	MHW035-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW035-RG.sorted.bam.flagstat
Samtools	flagstat	MHW161-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW161-RG.sorted.bam.flagstat
Samtools	flagstat	MHW073-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW073-RG.sorted.bam.flagstat
Samtools	flagstat	MHW219-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW219-RG.sorted.bam.flagstat
Samtools	flagstat	MHW228-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW228-RG.sorted.bam.flagstat
Samtools	flagstat	MHW087-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW087-RG.sorted.bam.flagstat
Samtools	flagstat	MHW269-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW269-RG.sorted.bam.flagstat
Samtools	flagstat	MHW082-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW082-RG.sorted.bam.flagstat
Samtools	flagstat	MHW164-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW164-RG.sorted.bam.flagstat
Samtools	flagstat	MHW334-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW334-RG.sorted.bam.flagstat
Samtools	flagstat	MHW343-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW343-RG.sorted.bam.flagstat
Samtools	flagstat	MHW344-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW344-RG.sorted.bam.flagstat
Samtools	flagstat	MHW342-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW342-RG.sorted.bam.flagstat
Samtools	flagstat	MHW310-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW310-RG.sorted.bam.flagstat
Samtools	flagstat	MHW122-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW122-RG.sorted.bam.flagstat
Samtools	flagstat	MHW148-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW148-RG.sorted.bam.flagstat
Samtools	flagstat	MHW340-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW340-RG.sorted.bam.flagstat
Samtools	flagstat	MHW350-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW350-RG.sorted.bam.flagstat
Samtools	flagstat	MHW209-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW209-RG.sorted.bam.flagstat
Samtools	flagstat	MHW097-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW097-RG.sorted.bam.flagstat
Samtools	flagstat	MHW202-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW202-RG.sorted.bam.flagstat
Samtools	flagstat	MHW193-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW193-RG.sorted.bam.flagstat
Samtools	flagstat	MHW184-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW184-RG.sorted.bam.flagstat
Samtools	flagstat	MHW135-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW135-RG.sorted.bam.flagstat
Samtools	flagstat	MHW026-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW026-RG.sorted.bam.flagstat
Samtools	flagstat	MHW100-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW100-RG.sorted.bam.flagstat
Samtools	flagstat	MHW270-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW270-RG.sorted.bam.flagstat
Samtools	flagstat	MHW079-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW079-RG.sorted.bam.flagstat
Samtools	flagstat	MHW137-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW137-RG.sorted.bam.flagstat
Samtools	flagstat	MHW329-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW329-RG.sorted.bam.flagstat
Samtools	flagstat	MHW347-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW347-RG.sorted.bam.flagstat
Samtools	flagstat	MHW016-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW016-RG.sorted.bam.flagstat
Samtools	flagstat	MHW084-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW084-RG.sorted.bam.flagstat
Samtools	flagstat	MHW258-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW258-RG.sorted.bam.flagstat
Samtools	flagstat	MHW431-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW431-RG.sorted.bam.flagstat
Samtools	flagstat	MHW237-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW237-RG.sorted.bam.flagstat
Samtools	flagstat	MHW049-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW049-RG.sorted.bam.flagstat
Samtools	flagstat	MHW189-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW189-RG.sorted.bam.flagstat
Samtools	flagstat	MHW265-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW265-RG.sorted.bam.flagstat
Samtools	flagstat	MHW099-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW099-RG.sorted.bam.flagstat
Samtools	flagstat	MHW036-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW036-RG.sorted.bam.flagstat
Samtools	flagstat	MHW011-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW011-RG.sorted.bam.flagstat
Samtools	flagstat	MHW129-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW129-RG.sorted.bam.flagstat
Samtools	flagstat	MHW330-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW330-RG.sorted.bam.flagstat
Samtools	flagstat	MHW186-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW186-RG.sorted.bam.flagstat
Samtools	flagstat	MHW064-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW064-RG.sorted.bam.flagstat
Samtools	flagstat	MHW229-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW229-RG.sorted.bam.flagstat
Samtools	flagstat	MHW115-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW115-RG.sorted.bam.flagstat
Samtools	flagstat	MHW309-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW309-RG.sorted.bam.flagstat
Samtools	flagstat	MHW128-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW128-RG.sorted.bam.flagstat
Samtools	flagstat	MHW175-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW175-RG.sorted.bam.flagstat
Samtools	flagstat	MHW341-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW341-RG.sorted.bam.flagstat
Samtools	flagstat	MHW260-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW260-RG.sorted.bam.flagstat
Samtools	flagstat	MHW190-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW190-RG.sorted.bam.flagstat
Samtools	flagstat	MHW314-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW314-RG.sorted.bam.flagstat
Samtools	flagstat	MHW303-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW303-RG.sorted.bam.flagstat
Samtools	flagstat	MHW109-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW109-RG.sorted.bam.flagstat
Samtools	flagstat	MHW120-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW120-RG.sorted.bam.flagstat
Samtools	flagstat	MHW155-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW155-RG.sorted.bam.flagstat
Samtools	flagstat	MHW422-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW422-RG.sorted.bam.flagstat
Samtools	flagstat	MHW106-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW106-RG.sorted.bam.flagstat
Samtools	flagstat	MHW211-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW211-RG.sorted.bam.flagstat
Samtools	flagstat	MHW088-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW088-RG.sorted.bam.flagstat
Samtools	flagstat	MHW156-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW156-RG.sorted.bam.flagstat
Samtools	flagstat	MHW325-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW325-RG.sorted.bam.flagstat
Samtools	flagstat	MHW312-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW312-RG.sorted.bam.flagstat
Samtools	flagstat	MHW024-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW024-RG.sorted.bam.flagstat
Samtools	flagstat	MHW144-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW144-RG.sorted.bam.flagstat
Samtools	flagstat	MHW142-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW142-RG.sorted.bam.flagstat
Samtools	flagstat	MHW292-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW292-RG.sorted.bam.flagstat
Samtools	flagstat	MHW272-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW272-RG.sorted.bam.flagstat
Samtools	flagstat	MHW021-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW021-RG.sorted.bam.flagstat
Samtools	flagstat	MHW328-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW328-RG.sorted.bam.flagstat
Samtools	flagstat	MHW117-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW117-RG.sorted.bam.flagstat
Samtools	flagstat	MHW279-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW279-RG.sorted.bam.flagstat
Samtools	flagstat	MHW185-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW185-RG.sorted.bam.flagstat
Samtools	flagstat	MHW125-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW125-RG.sorted.bam.flagstat
Samtools	flagstat	MHW141-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW141-RG.sorted.bam.flagstat
Samtools	flagstat	MHW121-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW121-RG.sorted.bam.flagstat
Samtools	flagstat	MHW131-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW131-RG.sorted.bam.flagstat
Samtools	flagstat	MHW321-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW321-RG.sorted.bam.flagstat
Samtools	flagstat	MHW222-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW222-RG.sorted.bam.flagstat
Samtools	flagstat	MHW426-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW426-RG.sorted.bam.flagstat
Samtools	flagstat	MHW345-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW345-RG.sorted.bam.flagstat
Samtools	flagstat	MHW092-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW092-RG.sorted.bam.flagstat
Samtools	flagstat	MHW172-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW172-RG.sorted.bam.flagstat
Samtools	flagstat	MHW090-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW090-RG.sorted.bam.flagstat
Samtools	flagstat	MHW066-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW066-RG.sorted.bam.flagstat
Samtools	flagstat	MHW112-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW112-RG.sorted.bam.flagstat
Samtools	flagstat	MHW165-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW165-RG.sorted.bam.flagstat
Samtools	flagstat	MHW157-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW157-RG.sorted.bam.flagstat
Samtools	flagstat	MHW293-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW293-RG.sorted.bam.flagstat
Samtools	flagstat	MHW273-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW273-RG.sorted.bam.flagstat
Samtools	flagstat	MHW208-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW208-RG.sorted.bam.flagstat
Samtools	flagstat	MHW051-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW051-RG.sorted.bam.flagstat
Samtools	flagstat	MHW220-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW220-RG.sorted.bam.flagstat
Samtools	flagstat	MHW201-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW201-RG.sorted.bam.flagstat
Samtools	flagstat	MHW080-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW080-RG.sorted.bam.flagstat
Samtools	flagstat	MHW173-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW173-RG.sorted.bam.flagstat
Samtools	flagstat	MHW065-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW065-RG.sorted.bam.flagstat
Samtools	flagstat	MHW060-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW060-RG.sorted.bam.flagstat
Samtools	flagstat	MHW348-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW348-RG.sorted.bam.flagstat
Samtools	flagstat	MHW015-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW015-RG.sorted.bam.flagstat
Samtools	flagstat	MHW203-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW203-RG.sorted.bam.flagstat
Samtools	flagstat	MHW105-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW105-RG.sorted.bam.flagstat
Samtools	flagstat	MHW231-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW231-RG.sorted.bam.flagstat
Samtools	flagstat	MHW042-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW042-RG.sorted.bam.flagstat
Samtools	flagstat	MHW076-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW076-RG.sorted.bam.flagstat
Samtools	flagstat	MHW206-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW206-RG.sorted.bam.flagstat
Samtools	flagstat	MHW351-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW351-RG.sorted.bam.flagstat
Samtools	flagstat	MHW204-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW204-RG.sorted.bam.flagstat
Samtools	flagstat	MHW123-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW123-RG.sorted.bam.flagstat
Samtools	flagstat	MHW058-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW058-RG.sorted.bam.flagstat
Samtools	flagstat	MHW276-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW276-RG.sorted.bam.flagstat
Samtools	flagstat	MHW041-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW041-RG.sorted.bam.flagstat
Samtools	flagstat	MHW407-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW407-RG.sorted.bam.flagstat
Samtools	flagstat	MHW177-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW177-RG.sorted.bam.flagstat
Samtools	flagstat	MHW022-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW022-RG.sorted.bam.flagstat
Samtools	flagstat	MHW053-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW053-RG.sorted.bam.flagstat
Samtools	flagstat	MHW044-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW044-RG.sorted.bam.flagstat
Samtools	flagstat	MHW187-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW187-RG.sorted.bam.flagstat
Samtools	flagstat	MHW168-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW168-RG.sorted.bam.flagstat
Samtools	flagstat	MHW167-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW167-RG.sorted.bam.flagstat
Samtools	flagstat	MHW146-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW146-RG.sorted.bam.flagstat
Samtools	flagstat	MHW232-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW232-RG.sorted.bam.flagstat
Samtools	flagstat	MHW072-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW072-RG.sorted.bam.flagstat
Samtools	flagstat	MHW419-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW419-RG.sorted.bam.flagstat
Samtools	flagstat	MHW282-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW282-RG.sorted.bam.flagstat
Samtools	flagstat	MHW166-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW166-RG.sorted.bam.flagstat
Samtools	flagstat	MHW216-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW216-RG.sorted.bam.flagstat
Samtools	flagstat	MHW410-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW410-RG.sorted.bam.flagstat
Samtools	flagstat	MHW171-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW171-RG.sorted.bam.flagstat
Samtools	flagstat	MHW009-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW009-RG.sorted.bam.flagstat
Samtools	flagstat	MHW298-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW298-RG.sorted.bam.flagstat
Samtools	flagstat	MHW174-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW174-RG.sorted.bam.flagstat
Samtools	flagstat	MHW138-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW138-RG.sorted.bam.flagstat
Samtools	flagstat	MHW038-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW038-RG.sorted.bam.flagstat
Samtools	flagstat	MHW195-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW195-RG.sorted.bam.flagstat
Samtools	flagstat	MHW086-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW086-RG.sorted.bam.flagstat
Samtools	flagstat	MHW158-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW158-RG.sorted.bam.flagstat
Samtools	flagstat	MHW421-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW421-RG.sorted.bam.flagstat
Samtools	flagstat	MHW102-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW102-RG.sorted.bam.flagstat
Samtools	flagstat	MHW055-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW055-RG.sorted.bam.flagstat
Samtools	flagstat	MHW288-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW288-RG.sorted.bam.flagstat
Samtools	flagstat	MHW182-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW182-RG.sorted.bam.flagstat
Samtools	flagstat	MHW159-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW159-RG.sorted.bam.flagstat
Samtools	flagstat	MHW075-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW075-RG.sorted.bam.flagstat
Samtools	flagstat	MHW019-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW019-RG.sorted.bam.flagstat
Samtools	flagstat	MHW353-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW353-RG.sorted.bam.flagstat
Samtools	flagstat	MHW225-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW225-RG.sorted.bam.flagstat
Samtools	flagstat	MHW322-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW322-RG.sorted.bam.flagstat
Samtools	flagstat	MHW040-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW040-RG.sorted.bam.flagstat
Samtools	flagstat	MHW113-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW113-RG.sorted.bam.flagstat
Samtools	flagstat	MHW280-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW280-RG.sorted.bam.flagstat
Samtools	flagstat	MHW047-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW047-RG.sorted.bam.flagstat
Samtools	flagstat	MHW326-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW326-RG.sorted.bam.flagstat
Samtools	flagstat	MHW294-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW294-RG.sorted.bam.flagstat
Samtools	flagstat	MHW130-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW130-RG.sorted.bam.flagstat
Samtools	flagstat	MHW332-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW332-RG.sorted.bam.flagstat
Samtools	flagstat	MHW101-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW101-RG.sorted.bam.flagstat
Samtools	flagstat	MHW352-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW352-RG.sorted.bam.flagstat
Samtools	flagstat	MHW307-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW307-RG.sorted.bam.flagstat
Samtools	flagstat	MHW116-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW116-RG.sorted.bam.flagstat
Samtools	flagstat	MHW274-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW274-RG.sorted.bam.flagstat
Samtools	flagstat	MHW007-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW007-RG.sorted.bam.flagstat
Samtools	flagstat	MHW240-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW240-RG.sorted.bam.flagstat
Samtools	flagstat	MHW284-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW284-RG.sorted.bam.flagstat
Samtools	flagstat	MHW013-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW013-RG.sorted.bam.flagstat
Samtools	flagstat	MHW085-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW085-RG.sorted.bam.flagstat
Samtools	flagstat	MHW039-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW039-RG.sorted.bam.flagstat
Samtools	flagstat	MHW025-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW025-RG.sorted.bam.flagstat
Samtools	flagstat	MHW052-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW052-RG.sorted.bam.flagstat
Samtools	flagstat	MHW215-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW215-RG.sorted.bam.flagstat
Samtools	flagstat	MHW029-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW029-RG.sorted.bam.flagstat
Samtools	flagstat	MHW324-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW324-RG.sorted.bam.flagstat
Samtools	flagstat	MHW033-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW033-RG.sorted.bam.flagstat
Samtools	flagstat	MHW425-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW425-RG.sorted.bam.flagstat
Samtools	flagstat	MHW147-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW147-RG.sorted.bam.flagstat
Samtools	flagstat	MHW281-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW281-RG.sorted.bam.flagstat
Samtools	flagstat	MHW012-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW012-RG.sorted.bam.flagstat
Samtools	flagstat	MHW271-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW271-RG.sorted.bam.flagstat
Samtools	flagstat	MHW178-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW178-RG.sorted.bam.flagstat
Samtools	flagstat	MHW339-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW339-RG.sorted.bam.flagstat
Samtools	flagstat	MHW059-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW059-RG.sorted.bam.flagstat
Samtools	flagstat	MHW327-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW327-RG.sorted.bam.flagstat
Samtools	flagstat	MHW107-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW107-RG.sorted.bam.flagstat
Samtools	flagstat	MHW056-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW056-RG.sorted.bam.flagstat
Samtools	flagstat	MHW067-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW067-RG.sorted.bam.flagstat
Samtools	flagstat	MHW028-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW028-RG.sorted.bam.flagstat
Samtools	flagstat	MHW143-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW143-RG.sorted.bam.flagstat
Samtools	flagstat	MHW275-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW275-RG.sorted.bam.flagstat
Samtools	flagstat	MHW062-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW062-RG.sorted.bam.flagstat
Samtools	flagstat	MHW089-RG	/home/shared/16TB_HDD_01/sam/gitrepos/RobertsLab/project-cod-temperature/output/14.00-heatwave-genetics-trimmed-bwa-alignments/MHW089-RG.sorted.bam.flagstat