nextflow run nf-core/methylseq \
-c /gscratch/scrubbed/sr320/github/project-cod-temperature/code/17.config \
--input /gscratch/scrubbed/sr320/github/project-cod-temperature/code/17.samplesheet.csv \
--outdir /gscratch/scrubbed/sr320/github/project-cod-temperature/output/17-nextflow \
--fasta /gscratch/scrubbed/sr320/github/project-cod-temperature/data/genome/GCF_031168955.1_ASM3116895v1_genomic.fa \
-resume \
-with-trace \
-with-report nf_report.html \
-with-timeline nf_timeline.html \
--nomeseq