File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
LCo_BSr1.LCo_BSr1_1_val_1_bismark_bt2_pe.bam	99884564	61436085	22201915	16246560	4	3289145	58146940	2119450762	35196110	203705768	1705603	329582787	7891941	1541368553
LYa_BSr1.LYa_BSr1_1_val_1_bismark_bt2_pe.bam	99886071	60497907	23941776	15446381	7	3483592	57014315	2135694519	36328927	202817359	1678019	332038238	7741485	1555090491
LYa_BSr2.LYa_BSr2_1_val_1_bismark_bt2_pe.bam	99854870	60924254	23161141	15769473	2	2613117	58311137	2156960503	36864215	205374433	1721125	336306625	7914826	1568779279
LCo_BSr2.LCo_BSr2_1_val_1_bismark_bt2_pe.bam	99855242	61120556	22331344	16403336	6	2880564	58239992	2115542071	36388894	202358137	1676065	327424960	7754237	1539939778
LYa_BSr3.LYa_BSr3_1_val_1_bismark_bt2_pe.bam	99856232	61052677	22679982	16123569	4	2257470	58795207	2166472942	35758250	211349614	1764489	339593801	8106563	1569900225
LCo_BSr3.LCo_BSr3_1_val_1_bismark_bt2_pe.bam	99859420	61111039	22243894	16504482	5	2925054	58185985	2131144762	35315256	205965733	1787358	331487323	8275953	1548313139