LYa_BSr3_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.2
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 58445659 lines in total
Total number of methylation call strings processed: 116891318

Final Cytosine Methylation Report
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Total number of C's analysed:	2247385062

Total methylated C's in CpG context:	41445412
Total methylated C's in CHG context:	9234843
Total methylated C's in CHH context:	45253056

Total C to T conversions in CpG context:	213631105
Total C to T conversions in CHG context:	343928921
Total C to T conversions in CHH context:	1593891725

C methylated in CpG context:	16.2%
C methylated in non-CpG context:	2.7%