CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 99565 766683 11.49 866248 2 170266 861943 16.50 1032209 3 140695 679791 17.15 820486 4 146720 867469 14.47 1014189 5 151619 806037 15.83 957656 6 161500 903406 15.17 1064906 7 158401 813886 16.29 972287 8 150750 786593 16.08 937343 9 143975 784699 15.50 928674 10 141116 752969 15.78 894085 11 137247 780002 14.96 917249 12 138491 754225 15.51 892716 13 137313 761432 15.28 898745 14 137521 761034 15.30 898555 15 139221 760322 15.48 899543 16 140499 773314 15.38 913813 17 139326 771928 15.29 911254 18 142345 786514 15.32 928859 19 142928 785027 15.40 927955 20 142213 781741 15.39 923954 21 143170 780637 15.50 923807 22 142974 775788 15.56 918762 23 142827 775612 15.55 918439 24 144409 779938 15.62 924347 25 143641 778636 15.57 922277 26 141678 777246 15.42 918924 27 141897 776865 15.44 918762 28 142188 783704 15.36 925892 29 142591 784733 15.38 927324 30 144847 792046 15.46 936893 31 144364 785658 15.52 930022 32 142624 781605 15.43 924229 33 141891 787177 15.27 929068 34 144271 784704 15.53 928975 35 144494 783638 15.57 928132 36 144726 781323 15.63 926049 37 142245 779891 15.43 922136 38 143627 784762 15.47 928389 39 142649 781592 15.43 924241 40 142232 784999 15.34 927231 41 142443 782034 15.41 924477 42 143540 789048 15.39 932588 43 142812 780959 15.46 923771 44 144145 779875 15.60 924020 45 142964 776710 15.55 919674 46 142646 778407 15.49 921053 47 142268 777372 15.47 919640 48 142366 778583 15.46 920949 49 140803 776883 15.34 917686 50 142144 774372 15.51 916516 51 141884 778905 15.41 920789 52 141537 777816 15.40 919353 53 142398 778886 15.46 921284 54 143001 778853 15.51 921854 55 141830 775805 15.46 917635 56 143265 776716 15.57 919981 57 143553 778979 15.56 922532 58 141103 780106 15.32 921209 59 141008 779645 15.32 920653 60 141157 779054 15.34 920211 61 140979 775432 15.38 916411 62 141371 777214 15.39 918585 63 141773 777484 15.42 919257 64 142270 779827 15.43 922097 65 141117 776379 15.38 917496 66 141034 777490 15.35 918524 67 140841 780782 15.28 921623 68 141934 777606 15.44 919540 69 140721 776504 15.34 917225 70 140228 776917 15.29 917145 71 139667 777207 15.23 916874 72 139494 774489 15.26 913983 73 140704 776248 15.34 916952 74 140667 774961 15.36 915628 75 140819 777421 15.34 918240 76 141341 780043 15.34 921384 77 141998 778281 15.43 920279 78 141594 776189 15.43 917783 79 140983 774527 15.40 915510 80 139958 773663 15.32 913621 81 140505 775386 15.34 915891 82 141418 775186 15.43 916604 83 139626 774138 15.28 913764 84 141187 777825 15.36 919012 85 139994 774684 15.31 914678 86 140068 773575 15.33 913643 87 139607 773229 15.29 912836 88 140836 773765 15.40 914601 89 139581 774115 15.28 913696 90 140075 773832 15.33 913907 91 138456 773211 15.19 911667 92 138486 773862 15.18 912348 93 139171 776530 15.20 915701 94 138682 773158 15.21 911840 95 137591 773107 15.11 910698 96 138062 773692 15.14 911754 97 139961 771762 15.35 911723 98 139953 774413 15.31 914366 99 138313 774180 15.16 912493 100 138725 776447 15.16 915172 101 137474 772597 15.11 910071 102 139066 772548 15.25 911614 103 137139 771258 15.10 908397 104 137552 771353 15.13 908905 105 138233 773503 15.16 911736 106 138196 774252 15.15 912448 107 137882 774621 15.11 912503 108 138714 774750 15.19 913464 109 137828 773971 15.12 911799 110 138407 773780 15.17 912187 111 138073 775413 15.11 913486 112 139203 774245 15.24 913448 113 137027 773061 15.06 910088 114 138126 772512 15.17 910638 115 137495 773174 15.10 910669 116 137764 774065 15.11 911829 117 137009 775453 15.02 912462 118 137599 774164 15.09 911763 119 136752 773399 15.03 910151 120 135746 773507 14.93 909253 121 135576 773817 14.91 909393 122 136767 774243 15.01 911010 123 135887 774119 14.93 910006 124 135922 772234 14.97 908156 125 136003 774735 14.93 910738 126 136615 774375 15.00 910990 127 137556 772992 15.11 910548 128 136590 772820 15.02 909410 129 135850 771361 14.97 907211 130 134052 770063 14.83 904115 131 134419 770047 14.86 904466 132 134307 769649 14.86 903956 133 134867 770990 14.89 905857 134 136660 772435 15.03 909095 135 134949 770151 14.91 905100 136 134725 770256 14.89 904981 137 134257 770107 14.85 904364 138 135299 771112 14.93 906411 139 135686 771160 14.96 906846 140 135585 771867 14.94 907452 141 134574 768757 14.90 903331 142 133686 767168 14.84 900854 143 134747 767088 14.94 901835 144 134627 768928 14.90 903555 145 133845 768108 14.84 901953 146 135440 770110 14.96 905550 147 134747 771840 14.86 906587 148 135276 771313 14.92 906589 149 133865 769174 14.82 903039 150 132570 768510 14.71 901080 151 135076 769716 14.93 904792 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 21435 1645456 1.29 1666891 2 12782 1215108 1.04 1227890 3 8319 1156057 0.71 1164376 4 7740 1304933 0.59 1312673 5 8221 1412407 0.58 1420628 6 8056 1370963 0.58 1379019 7 7179 1241530 0.57 1248709 8 6842 1238149 0.55 1244991 9 6299 1230318 0.51 1236617 10 5977 1230998 0.48 1236975 11 5903 1250370 0.47 1256273 12 5604 1257526 0.44 1263130 13 5389 1249234 0.43 1254623 14 5372 1249003 0.43 1254375 15 5194 1258550 0.41 1263744 16 5109 1258283 0.40 1263392 17 5033 1265418 0.40 1270451 18 5001 1283707 0.39 1288708 19 4943 1273593 0.39 1278536 20 4830 1277193 0.38 1282023 21 4757 1276758 0.37 1281515 22 4609 1271520 0.36 1276129 23 4570 1273420 0.36 1277990 24 4677 1268590 0.37 1273267 25 4396 1269655 0.35 1274051 26 4471 1263694 0.35 1268165 27 4510 1278883 0.35 1283393 28 4681 1272456 0.37 1277137 29 4542 1273118 0.36 1277660 30 4465 1283121 0.35 1287586 31 4484 1281558 0.35 1286042 32 4627 1281059 0.36 1285686 33 4555 1290454 0.35 1295009 34 4523 1282891 0.35 1287414 35 4482 1277774 0.35 1282256 36 4565 1279191 0.36 1283756 37 4637 1272811 0.36 1277448 38 4388 1269834 0.34 1274222 39 4462 1273477 0.35 1277939 40 4556 1271647 0.36 1276203 41 4535 1273754 0.35 1278289 42 4423 1278326 0.34 1282749 43 4466 1275338 0.35 1279804 44 4441 1275678 0.35 1280119 45 4587 1279672 0.36 1284259 46 4506 1275732 0.35 1280238 47 4509 1274340 0.35 1278849 48 4411 1274237 0.34 1278648 49 4519 1270908 0.35 1275427 50 4439 1269798 0.35 1274237 51 4517 1276524 0.35 1281041 52 4506 1283968 0.35 1288474 53 4541 1277168 0.35 1281709 54 4408 1281345 0.34 1285753 55 4615 1273794 0.36 1278409 56 4466 1276243 0.35 1280709 57 4542 1277361 0.35 1281903 58 4474 1277792 0.35 1282266 59 4454 1271538 0.35 1275992 60 4621 1276261 0.36 1280882 61 4391 1275613 0.34 1280004 62 4489 1275074 0.35 1279563 63 4633 1284067 0.36 1288700 64 4655 1280338 0.36 1284993 65 4475 1279339 0.35 1283814 66 4610 1283000 0.36 1287610 67 4447 1277153 0.35 1281600 68 4484 1272684 0.35 1277168 69 4507 1275197 0.35 1279704 70 4486 1275650 0.35 1280136 71 4458 1268438 0.35 1272896 72 4463 1278422 0.35 1282885 73 4524 1273309 0.35 1277833 74 4487 1274672 0.35 1279159 75 4528 1277937 0.35 1282465 76 4462 1279117 0.35 1283579 77 4442 1273364 0.35 1277806 78 4439 1274862 0.35 1279301 79 4444 1274299 0.35 1278743 80 4458 1275628 0.35 1280086 81 4476 1278562 0.35 1283038 82 4574 1272081 0.36 1276655 83 4478 1271831 0.35 1276309 84 4455 1280614 0.35 1285069 85 4583 1275923 0.36 1280506 86 4471 1274500 0.35 1278971 87 4523 1275358 0.35 1279881 88 4411 1273168 0.35 1277579 89 4490 1271339 0.35 1275829 90 4540 1276409 0.35 1280949 91 4573 1273121 0.36 1277694 92 4335 1271129 0.34 1275464 93 4507 1274199 0.35 1278706 94 4318 1275068 0.34 1279386 95 4399 1272891 0.34 1277290 96 4389 1275505 0.34 1279894 97 4481 1277935 0.35 1282416 98 4423 1276761 0.35 1281184 99 4635 1276220 0.36 1280855 100 4444 1276559 0.35 1281003 101 4430 1271723 0.35 1276153 102 4299 1277947 0.34 1282246 103 4460 1271495 0.35 1275955 104 4391 1275506 0.34 1279897 105 4422 1278251 0.34 1282673 106 4563 1276870 0.36 1281433 107 4512 1276506 0.35 1281018 108 4460 1279438 0.35 1283898 109 4392 1272245 0.34 1276637 110 4361 1274830 0.34 1279191 111 4558 1273579 0.36 1278137 112 4388 1273628 0.34 1278016 113 4531 1270234 0.36 1274765 114 4449 1277200 0.35 1281649 115 4434 1275634 0.35 1280068 116 4507 1276080 0.35 1280587 117 4476 1276378 0.35 1280854 118 4481 1273449 0.35 1277930 119 4477 1268913 0.35 1273390 120 4486 1272794 0.35 1277280 121 4589 1273530 0.36 1278119 122 4549 1269706 0.36 1274255 123 4515 1272296 0.35 1276811 124 4708 1270116 0.37 1274824 125 4597 1271845 0.36 1276442 126 4818 1275773 0.38 1280591 127 4694 1276806 0.37 1281500 128 4703 1276577 0.37 1281280 129 4729 1273171 0.37 1277900 130 4822 1275035 0.38 1279857 131 4839 1270244 0.38 1275083 132 4939 1274059 0.39 1278998 133 4914 1270437 0.39 1275351 134 5077 1272238 0.40 1277315 135 5115 1272895 0.40 1278010 136 4987 1271836 0.39 1276823 137 5234 1270316 0.41 1275550 138 5241 1272610 0.41 1277851 139 5395 1270679 0.42 1276074 140 5457 1271128 0.43 1276585 141 5504 1268326 0.43 1273830 142 5705 1269339 0.45 1275044 143 5741 1267370 0.45 1273111 144 6142 1270983 0.48 1277125 145 6289 1270530 0.49 1276819 146 7202 1270627 0.56 1277829 147 8098 1272260 0.63 1280358 148 8594 1268887 0.67 1277481 149 9395 1265579 0.74 1274974 150 10608 1273349 0.83 1283957 151 11056 1267022 0.87 1278078 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 57048 6073539 0.93 6130587 2 57408 5080744 1.12 5138152 3 31436 4800207 0.65 4831643 4 30129 5706850 0.53 5736979 5 30275 5907905 0.51 5938180 6 29426 5922548 0.49 5951974 7 28599 5541468 0.51 5570067 8 27663 5730118 0.48 5757781 9 26672 5825909 0.46 5852581 10 25849 5836969 0.44 5862818 11 24869 5999114 0.41 6023983 12 24258 6004886 0.40 6029144 13 23427 5970704 0.39 5994131 14 22830 5945265 0.38 5968095 15 22840 5918931 0.38 5941771 16 21923 5908695 0.37 5930618 17 22667 5948353 0.38 5971020 18 22006 5980058 0.37 6002064 19 21846 5981651 0.36 6003497 20 21194 5979959 0.35 6001153 21 20955 5968047 0.35 5989002 22 20892 5949242 0.35 5970134 23 20812 5927145 0.35 5947957 24 20480 5940762 0.34 5961242 25 20682 5937190 0.35 5957872 26 20546 5942929 0.34 5963475 27 20694 5976462 0.35 5997156 28 20532 5971840 0.34 5992372 29 20494 5982326 0.34 6002820 30 20736 5995796 0.34 6016532 31 20774 5990366 0.35 6011140 32 20492 5977428 0.34 5997920 33 20623 5980211 0.34 6000834 34 20728 5961246 0.35 5981974 35 20673 5959451 0.35 5980124 36 20381 5959418 0.34 5979799 37 20526 5960897 0.34 5981423 38 20442 5953441 0.34 5973883 39 20357 5970878 0.34 5991235 40 20625 5987156 0.34 6007781 41 20606 5980926 0.34 6001532 42 20714 6000812 0.34 6021526 43 20938 5963419 0.35 5984357 44 20346 5959135 0.34 5979481 45 20704 5992607 0.34 6013311 46 20422 5973160 0.34 5993582 47 20729 5972563 0.35 5993292 48 20479 5986966 0.34 6007445 49 20469 5979236 0.34 5999705 50 20577 5977583 0.34 5998160 51 20543 5987436 0.34 6007979 52 20753 5988144 0.35 6008897 53 20425 5976223 0.34 5996648 54 20631 5986565 0.34 6007196 55 20590 5978940 0.34 5999530 56 20744 5976835 0.35 5997579 57 20543 5978827 0.34 5999370 58 20397 5973986 0.34 5994383 59 20514 5982752 0.34 6003266 60 20622 6008858 0.34 6029480 61 20576 6003728 0.34 6024304 62 20598 6003256 0.34 6023854 63 20478 6001845 0.34 6022323 64 20596 5995398 0.34 6015994 65 20388 5981731 0.34 6002119 66 20556 5982822 0.34 6003378 67 20395 5977810 0.34 5998205 68 20325 5992602 0.34 6012927 69 20530 5995491 0.34 6016021 70 20405 5983593 0.34 6003998 71 20496 5979155 0.34 5999651 72 20628 5994392 0.34 6015020 73 20216 5985311 0.34 6005527 74 20253 5978821 0.34 5999074 75 20272 5982240 0.34 6002512 76 20666 5979095 0.34 5999761 77 20493 5975300 0.34 5995793 78 20391 5982032 0.34 6002423 79 20564 5984090 0.34 6004654 80 20355 5988246 0.34 6008601 81 20326 5993042 0.34 6013368 82 20325 5983478 0.34 6003803 83 20316 5984044 0.34 6004360 84 20336 5995618 0.34 6015954 85 20237 5988183 0.34 6008420 86 20473 5985974 0.34 6006447 87 20425 5989456 0.34 6009881 88 20521 5994068 0.34 6014589 89 20296 5989231 0.34 6009527 90 20377 5989157 0.34 6009534 91 20174 5987392 0.34 6007566 92 20511 5989295 0.34 6009806 93 20394 5986703 0.34 6007097 94 20107 5978700 0.34 5998807 95 20286 5982440 0.34 6002726 96 20367 6005700 0.34 6026067 97 20389 5998363 0.34 6018752 98 20509 5990161 0.34 6010670 99 20393 5989913 0.34 6010306 100 20124 5978745 0.34 5998869 101 20243 5977597 0.34 5997840 102 20292 5993576 0.34 6013868 103 20323 5990061 0.34 6010384 104 20325 5992658 0.34 6012983 105 20396 5997640 0.34 6018036 106 20302 5980571 0.34 6000873 107 20299 5975136 0.34 5995435 108 20213 5977718 0.34 5997931 109 20369 5970056 0.34 5990425 110 20502 5970327 0.34 5990829 111 20712 5981335 0.35 6002047 112 20828 5981842 0.35 6002670 113 20627 5981377 0.34 6002004 114 20900 5994705 0.35 6015605 115 20913 5988365 0.35 6009278 116 20995 5983194 0.35 6004189 117 20841 5985208 0.35 6006049 118 21190 5982304 0.35 6003494 119 21084 5973887 0.35 5994971 120 21196 5986009 0.35 6007205 121 21233 5976451 0.35 5997684 122 21377 5973219 0.36 5994596 123 21583 5994208 0.36 6015791 124 21708 5990894 0.36 6012602 125 21827 5985716 0.36 6007543 126 21724 5992404 0.36 6014128 127 22358 5977462 0.37 5999820 128 22234 5965504 0.37 5987738 129 22694 5965745 0.38 5988439 130 22391 5970110 0.37 5992501 131 22926 5970905 0.38 5993831 132 22949 5980778 0.38 6003727 133 23235 5978456 0.39 6001691 134 23993 5973446 0.40 5997439 135 24115 5971060 0.40 5995175 136 24636 5969409 0.41 5994045 137 24904 5950574 0.42 5975478 138 25312 5960625 0.42 5985937 139 25919 5957109 0.43 5983028 140 26547 5962746 0.44 5989293 141 27306 5961551 0.46 5988857 142 27842 5957564 0.47 5985406 143 28301 5964174 0.47 5992475 144 29665 5969080 0.49 5998745 145 30981 5963659 0.52 5994640 146 33627 5960717 0.56 5994344 147 36098 5970018 0.60 6006116 148 39884 5979722 0.66 6019606 149 41555 5974548 0.69 6016103 150 44247 5967060 0.74 6011307 151 45844 5957745 0.76 6003589 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1939455 302164 86.52 2241619 2 622704 97978 86.40 720682 3 488522 162726 75.01 651248 4 573039 296257 65.92 869296 5 419938 347450 54.72 767388 6 333476 382099 46.60 715575 7 266774 439687 37.76 706461 8 246054 528851 31.75 774905 9 221559 610518 26.63 832077 10 201673 665971 23.24 867644 11 182151 715658 20.29 897809 12 170068 732816 18.84 902884 13 160369 736145 17.89 896514 14 153145 740424 17.14 893569 15 146058 738119 16.52 884177 16 143352 738019 16.26 881371 17 143407 734775 16.33 878182 18 143426 733496 16.36 876922 19 141989 732633 16.23 874622 20 142705 733423 16.29 876128 21 143003 733049 16.32 876052 22 142327 732442 16.27 874769 23 143683 733725 16.38 877408 24 142514 735248 16.24 877762 25 142406 738152 16.17 880558 26 142229 738933 16.14 881162 27 142529 741875 16.12 884404 28 142385 743418 16.07 885803 29 142257 742973 16.07 885230 30 141548 744653 15.97 886201 31 141600 742473 16.02 884073 32 141317 743485 15.97 884802 33 141120 742860 15.96 883980 34 141146 741377 15.99 882523 35 140161 739473 15.93 879634 36 140079 738676 15.94 878755 37 139315 737848 15.88 877163 38 139596 737271 15.92 876867 39 138231 734764 15.83 872995 40 137864 734001 15.81 871865 41 137660 731377 15.84 869037 42 136758 727633 15.82 864391 43 136614 727160 15.82 863774 44 136046 724624 15.81 860670 45 135659 722657 15.81 858316 46 135508 721492 15.81 857000 47 134075 718350 15.73 852425 48 133528 715935 15.72 849463 49 132465 713335 15.66 845800 50 132799 712910 15.70 845709 51 131661 709918 15.64 841579 52 130839 705878 15.64 836717 53 130270 704506 15.61 834776 54 129703 702138 15.59 831841 55 129133 699737 15.58 828870 56 128707 699201 15.55 827908 57 128481 694671 15.61 823152 58 128076 692519 15.61 820595 59 127765 690229 15.62 817994 60 126137 688709 15.48 814846 61 126157 683154 15.59 809311 62 124586 681015 15.46 805601 63 124772 677666 15.55 802438 64 123580 675001 15.47 798581 65 122916 672434 15.45 795350 66 123147 669183 15.54 792330 67 122028 666317 15.48 788345 68 121414 662404 15.49 783818 69 120689 660415 15.45 781104 70 119531 656978 15.39 776509 71 119580 653421 15.47 773001 72 119382 651481 15.49 770863 73 118336 648201 15.44 766537 74 117187 643791 15.40 760978 75 116837 639477 15.45 756314 76 116353 635971 15.47 752324 77 115768 633425 15.45 749193 78 115115 631423 15.42 746538 79 114175 627452 15.40 741627 80 113344 623502 15.38 736846 81 113020 619889 15.42 732909 82 112418 615721 15.44 728139 83 111834 612912 15.43 724746 84 110473 607271 15.39 717744 85 109787 604452 15.37 714239 86 109241 601771 15.36 711012 87 107830 597278 15.29 705108 88 107116 593193 15.30 700309 89 106618 589297 15.32 695915 90 106070 585849 15.33 691919 91 105372 581358 15.34 686730 92 104067 579573 15.22 683640 93 104200 577189 15.29 681389 94 103451 573527 15.28 676978 95 102442 567716 15.29 670158 96 102243 562924 15.37 665167 97 100734 560308 15.24 661042 98 99812 555431 15.23 655243 99 98902 550580 15.23 649482 100 99052 547203 15.33 646255 101 97529 542441 15.24 639970 102 96843 538838 15.23 635681 103 95265 534565 15.13 629830 104 94465 531202 15.10 625667 105 94248 525507 15.21 619755 106 93040 521941 15.13 614981 107 92545 519706 15.12 612251 108 91096 514439 15.04 605535 109 90795 510366 15.10 601161 110 90493 506111 15.17 596604 111 89058 502711 15.05 591769 112 88620 498309 15.10 586929 113 87748 494858 15.06 582606 114 86553 489869 15.02 576422 115 85866 486732 15.00 572598 116 85201 482383 15.01 567584 117 84659 478275 15.04 562934 118 83760 475658 14.97 559418 119 83218 472735 14.97 555953 120 81722 466450 14.91 548172 121 80530 462770 14.82 543300 122 80405 458604 14.92 539009 123 79971 454780 14.95 534751 124 78202 451052 14.78 529254 125 77425 448270 14.73 525695 126 76476 442867 14.73 519343 127 75775 439345 14.71 515120 128 75305 435028 14.76 510333 129 74595 430496 14.77 505091 130 73751 426523 14.74 500274 131 72963 423290 14.70 496253 132 72308 419490 14.70 491798 133 71126 416665 14.58 487791 134 69759 411540 14.49 481299 135 69954 407998 14.64 477952 136 68808 402864 14.59 471672 137 67862 398529 14.55 466391 138 66531 394989 14.42 461520 139 66202 391850 14.45 458052 140 66117 388229 14.55 454346 141 65281 384874 14.50 450155 142 63835 379535 14.40 443370 143 63402 376374 14.42 439776 144 62786 373563 14.39 436349 145 61982 368912 14.38 430894 146 60855 363959 14.33 424814 147 60248 359760 14.34 420008 148 59814 357297 14.34 417111 149 58953 354918 14.24 413871 150 58403 350310 14.29 408713 151 56504 346385 14.02 402889 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2391087 372040 86.54 2763127 2 2185552 389784 84.86 2575336 3 583051 181247 76.29 764298 4 587538 310930 65.39 898468 5 537570 498550 51.88 1036120 6 374889 511658 42.29 886547 7 297965 560673 34.70 858638 8 210314 718856 22.63 929170 9 158388 872325 15.37 1030713 10 112159 1016024 9.94 1128183 11 78899 1134750 6.50 1213649 12 52711 1190272 4.24 1242983 13 35507 1208922 2.85 1244429 14 23739 1215542 1.92 1239281 15 15877 1220070 1.28 1235947 16 11624 1218818 0.94 1230442 17 9590 1215457 0.78 1225047 18 7900 1210317 0.65 1218217 19 7332 1204042 0.61 1211374 20 6673 1203175 0.55 1209848 21 6445 1204421 0.53 1210866 22 6890 1199850 0.57 1206740 23 6454 1201433 0.53 1207887 24 5858 1200737 0.49 1206595 25 5711 1201177 0.47 1206888 26 5516 1204215 0.46 1209731 27 5388 1207714 0.44 1213102 28 5705 1208295 0.47 1214000 29 5158 1213441 0.42 1218599 30 4963 1215571 0.41 1220534 31 4863 1210435 0.40 1215298 32 4792 1212857 0.39 1217649 33 4883 1211206 0.40 1216089 34 4712 1210749 0.39 1215461 35 4638 1212514 0.38 1217152 36 4599 1210696 0.38 1215295 37 4510 1208749 0.37 1213259 38 4379 1208618 0.36 1212997 39 4398 1206859 0.36 1211257 40 4422 1205412 0.37 1209834 41 4338 1201944 0.36 1206282 42 4351 1196141 0.36 1200492 43 4312 1194090 0.36 1198402 44 4258 1192544 0.36 1196802 45 4348 1189775 0.36 1194123 46 4239 1186684 0.36 1190923 47 4357 1183207 0.37 1187564 48 4283 1183082 0.36 1187365 49 4258 1177819 0.36 1182077 50 4213 1176043 0.36 1180256 51 4159 1172815 0.35 1176974 52 4199 1167669 0.36 1171868 53 4089 1163988 0.35 1168077 54 4183 1161174 0.36 1165357 55 4151 1155934 0.36 1160085 56 4135 1150225 0.36 1154360 57 4009 1150842 0.35 1154851 58 4040 1143615 0.35 1147655 59 4001 1139421 0.35 1143422 60 4082 1135740 0.36 1139822 61 4063 1131052 0.36 1135115 62 4022 1123937 0.36 1127959 63 3969 1119724 0.35 1123693 64 3982 1116463 0.36 1120445 65 3910 1113440 0.35 1117350 66 3994 1105395 0.36 1109389 67 3915 1102537 0.35 1106452 68 3944 1096189 0.36 1100133 69 3851 1090566 0.35 1094417 70 3812 1082963 0.35 1086775 71 3857 1081088 0.36 1084945 72 3769 1074886 0.35 1078655 73 3778 1070711 0.35 1074489 74 3759 1065307 0.35 1069066 75 3669 1058121 0.35 1061790 76 3770 1054335 0.36 1058105 77 3656 1046907 0.35 1050563 78 3668 1042374 0.35 1046042 79 3639 1036929 0.35 1040568 80 3589 1032577 0.35 1036166 81 3614 1023351 0.35 1026965 82 3653 1017471 0.36 1021124 83 3563 1012284 0.35 1015847 84 3531 1007109 0.35 1010640 85 3417 998118 0.34 1001535 86 3482 992284 0.35 995766 87 3529 987530 0.36 991059 88 3446 979372 0.35 982818 89 3436 974747 0.35 978183 90 3460 966954 0.36 970414 91 3334 962757 0.35 966091 92 3250 957558 0.34 960808 93 3315 949978 0.35 953293 94 3405 942239 0.36 945644 95 3229 936425 0.34 939654 96 3240 929421 0.35 932661 97 3309 924958 0.36 928267 98 3299 917946 0.36 921245 99 3258 910635 0.36 913893 100 3249 905377 0.36 908626 101 3085 898457 0.34 901542 102 3146 892073 0.35 895219 103 3120 885154 0.35 888274 104 3012 878462 0.34 881474 105 3122 871251 0.36 874373 106 2943 865451 0.34 868394 107 2999 856091 0.35 859090 108 3016 849889 0.35 852905 109 2950 843089 0.35 846039 110 2978 836172 0.35 839150 111 2960 829618 0.36 832578 112 2861 824066 0.35 826927 113 2807 816731 0.34 819538 114 2836 811466 0.35 814302 115 2841 801695 0.35 804536 116 2829 795163 0.35 797992 117 2801 789412 0.35 792213 118 2669 782965 0.34 785634 119 2768 776933 0.36 779701 120 2677 768095 0.35 770772 121 2597 761820 0.34 764417 122 2741 755907 0.36 758648 123 2606 749724 0.35 752330 124 2612 742055 0.35 744667 125 2671 733459 0.36 736130 126 2483 726687 0.34 729170 127 2641 718223 0.37 720864 128 2553 713960 0.36 716513 129 2415 704999 0.34 707414 130 2404 699557 0.34 701961 131 2400 693994 0.34 696394 132 2450 687334 0.36 689784 133 2384 680212 0.35 682596 134 2282 671803 0.34 674085 135 2360 666170 0.35 668530 136 2376 659682 0.36 662058 137 2256 653292 0.34 655548 138 2333 644878 0.36 647211 139 2257 638695 0.35 640952 140 2280 634098 0.36 636378 141 2235 626895 0.36 629130 142 2271 617194 0.37 619465 143 2238 611559 0.36 613797 144 2177 605984 0.36 608161 145 2237 599743 0.37 601980 146 2216 593595 0.37 595811 147 2153 587076 0.37 589229 148 2195 581705 0.38 583900 149 2180 575462 0.38 577642 150 2203 567873 0.39 570076 151 2389 559907 0.42 562296 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7920024 1223084 86.62 9143108 2 6614902 1134496 85.36 7749398 3 5788413 2085041 73.52 7873454 4 4903395 2740237 64.15 7643632 5 3491279 3251872 51.78 6743151 6 2697668 3576770 42.99 6274438 7 2012281 3689500 35.29 5701781 8 1498894 3854719 28.00 5353613 9 1076122 4100528 20.79 5176650 10 756174 4350479 14.81 5106653 11 506424 4760278 9.62 5266702 12 335108 5020969 6.26 5356077 13 216053 5214692 3.98 5430745 14 139832 5374253 2.54 5514085 15 91021 5515187 1.62 5606208 16 63836 5621504 1.12 5685340 17 48812 5691540 0.85 5740352 18 39230 5745784 0.68 5785014 19 34483 5777121 0.59 5811604 20 32199 5799145 0.55 5831344 21 30728 5808893 0.53 5839621 22 30340 5807089 0.52 5837429 23 30970 5805114 0.53 5836084 24 29837 5789741 0.51 5819578 25 29523 5782846 0.51 5812369 26 28583 5775607 0.49 5804190 27 27726 5773006 0.48 5800732 28 26957 5765639 0.47 5792596 29 26233 5767855 0.45 5794088 30 25801 5767669 0.45 5793470 31 24756 5765198 0.43 5789954 32 23772 5757494 0.41 5781266 33 22828 5743263 0.40 5766091 34 22363 5733707 0.39 5756070 35 22260 5724135 0.39 5746395 36 21501 5714402 0.37 5735903 37 21312 5704345 0.37 5725657 38 20696 5701777 0.36 5722473 39 20398 5693356 0.36 5713754 40 20300 5681980 0.36 5702280 41 19863 5668683 0.35 5688546 42 19681 5654887 0.35 5674568 43 19602 5637494 0.35 5657096 44 19558 5622584 0.35 5642142 45 19305 5610144 0.34 5629449 46 19289 5600323 0.34 5619612 47 19629 5585015 0.35 5604644 48 19192 5570031 0.34 5589223 49 19200 5556210 0.34 5575410 50 18995 5540903 0.34 5559898 51 19148 5520180 0.35 5539328 52 18738 5504527 0.34 5523265 53 19013 5488785 0.35 5507798 54 18851 5466525 0.34 5485376 55 18656 5447365 0.34 5466021 56 18642 5425246 0.34 5443888 57 18679 5400083 0.34 5418762 58 18490 5384760 0.34 5403250 59 18491 5360150 0.34 5378641 60 18152 5341381 0.34 5359533 61 18414 5320045 0.34 5338459 62 18080 5300453 0.34 5318533 63 17947 5269883 0.34 5287830 64 17891 5254437 0.34 5272328 65 17667 5226961 0.34 5244628 66 17782 5206446 0.34 5224228 67 17357 5174371 0.33 5191728 68 17512 5150485 0.34 5167997 69 17418 5129743 0.34 5147161 70 17414 5095454 0.34 5112868 71 17320 5078242 0.34 5095562 72 17408 5053085 0.34 5070493 73 17376 5034925 0.34 5052301 74 16776 5005627 0.33 5022403 75 16683 4981537 0.33 4998220 76 16986 4950270 0.34 4967256 77 16688 4926788 0.34 4943476 78 16665 4894123 0.34 4910788 79 16749 4871204 0.34 4887953 80 16214 4845603 0.33 4861817 81 16174 4812995 0.33 4829169 82 16358 4784289 0.34 4800647 83 16203 4754721 0.34 4770924 84 16117 4727269 0.34 4743386 85 16011 4697714 0.34 4713725 86 15825 4667198 0.34 4683023 87 15765 4634983 0.34 4650748 88 15615 4605073 0.34 4620688 89 15458 4578997 0.34 4594455 90 15497 4549541 0.34 4565038 91 15502 4520982 0.34 4536484 92 15353 4497426 0.34 4512779 93 15155 4467807 0.34 4482962 94 15184 4433409 0.34 4448593 95 14903 4402533 0.34 4417436 96 14915 4373295 0.34 4388210 97 14691 4342576 0.34 4357267 98 14455 4312011 0.33 4326466 99 14574 4279842 0.34 4294416 100 14107 4248004 0.33 4262111 101 14261 4220688 0.34 4234949 102 14243 4187574 0.34 4201817 103 13998 4158969 0.34 4172967 104 13687 4130640 0.33 4144327 105 13936 4096769 0.34 4110705 106 13927 4060598 0.34 4074525 107 13612 4029518 0.34 4043130 108 13407 4003661 0.33 4017068 109 13422 3969519 0.34 3982941 110 13406 3934933 0.34 3948339 111 13123 3906258 0.33 3919381 112 12956 3876609 0.33 3889565 113 12890 3842515 0.33 3855405 114 12834 3805313 0.34 3818147 115 12483 3778413 0.33 3790896 116 12600 3746983 0.34 3759583 117 12659 3715985 0.34 3728644 118 12521 3686132 0.34 3698653 119 12292 3656130 0.34 3668422 120 11858 3624182 0.33 3636040 121 11937 3593924 0.33 3605861 122 11775 3563406 0.33 3575181 123 11777 3531873 0.33 3543650 124 11525 3498194 0.33 3509719 125 11524 3461878 0.33 3473402 126 11391 3430897 0.33 3442288 127 11257 3399393 0.33 3410650 128 11378 3368117 0.34 3379495 129 10985 3335265 0.33 3346250 130 10955 3304862 0.33 3315817 131 10821 3274147 0.33 3284968 132 10887 3246578 0.33 3257465 133 10606 3210978 0.33 3221584 134 10547 3179989 0.33 3190536 135 10516 3150468 0.33 3160984 136 10399 3118518 0.33 3128917 137 10178 3088127 0.33 3098305 138 10274 3056130 0.34 3066404 139 10011 3023875 0.33 3033886 140 10062 2994562 0.33 3004624 141 9858 2965003 0.33 2974861 142 9947 2931354 0.34 2941301 143 9770 2898738 0.34 2908508 144 9864 2871341 0.34 2881205 145 9911 2842943 0.35 2852854 146 9691 2810360 0.34 2820051 147 9427 2779385 0.34 2788812 148 9563 2754245 0.35 2763808 149 9757 2727590 0.36 2737347 150 9942 2705499 0.37 2715441 151 10448 2669126 0.39 2679574