CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 104998 792172 11.70 897170 2 208040 841000 19.83 1049040 3 133821 739201 15.33 873022 4 141276 898747 13.58 1040023 5 156251 799917 16.34 956168 6 164303 945567 14.80 1109870 7 166648 866909 16.12 1033557 8 156799 814657 16.14 971456 9 149378 822327 15.37 971705 10 149738 787142 15.98 936880 11 141549 804347 14.96 945896 12 143131 790791 15.33 933922 13 142940 794417 15.25 937357 14 143695 798116 15.26 941811 15 144241 788741 15.46 932982 16 149352 810680 15.56 960032 17 143414 803664 15.14 947078 18 148058 813584 15.40 961642 19 149218 813889 15.49 963107 20 146352 811077 15.29 957429 21 147124 802213 15.50 949337 22 148212 805783 15.54 953995 23 149136 801679 15.69 950815 24 148890 806260 15.59 955150 25 147967 805749 15.51 953716 26 147651 801894 15.55 949545 27 146720 800806 15.48 947526 28 149585 805668 15.66 955253 29 148430 807718 15.52 956148 30 148767 816617 15.41 965384 31 150295 812625 15.61 962920 32 150307 810918 15.64 961225 33 147280 809994 15.39 957274 34 149648 808256 15.62 957904 35 149576 809931 15.59 959507 36 148905 805034 15.61 953939 37 146289 805461 15.37 951750 38 147074 805957 15.43 953031 39 148324 806202 15.54 954526 40 148294 808059 15.51 956353 41 148884 804077 15.62 952961 42 148758 810055 15.51 958813 43 147551 806888 15.46 954439 44 147349 805759 15.46 953108 45 147098 798917 15.55 946015 46 149014 800319 15.70 949333 47 147250 802026 15.51 949276 48 146728 802518 15.46 949246 49 145302 800776 15.36 946078 50 147146 797699 15.57 944845 51 147023 802956 15.48 949979 52 145441 800515 15.38 945956 53 148566 803029 15.61 951595 54 150791 801295 15.84 952086 55 146976 800579 15.51 947555 56 147302 799520 15.56 946822 57 147067 799277 15.54 946344 58 146797 804049 15.44 950846 59 145509 803130 15.34 948639 60 145432 799884 15.38 945316 61 145368 799753 15.38 945121 62 146453 799200 15.49 945653 63 146804 802194 15.47 948998 64 148227 802020 15.60 950247 65 146010 799132 15.45 945142 66 147453 798364 15.59 945817 67 145257 800055 15.37 945312 68 147468 801221 15.54 948689 69 146263 799433 15.47 945696 70 144470 800657 15.29 945127 71 145715 800671 15.40 946386 72 144812 797382 15.37 942194 73 145260 800594 15.36 945854 74 145488 797377 15.43 942865 75 146525 799671 15.49 946196 76 146949 801966 15.49 948915 77 146031 797963 15.47 943994 78 145991 798701 15.45 944692 79 145993 796007 15.50 942000 80 147874 795575 15.67 943449 81 145059 794608 15.44 939667 82 147029 798227 15.55 945256 83 145168 796923 15.41 942091 84 145569 798991 15.41 944560 85 146065 795272 15.52 941337 86 144917 795288 15.41 940205 87 144967 793757 15.44 938724 88 146118 794951 15.53 941069 89 146094 794341 15.53 940435 90 144288 794370 15.37 938658 91 143375 795791 15.27 939166 92 143525 795588 15.28 939113 93 144591 797881 15.34 942472 94 143753 795722 15.30 939475 95 143719 790614 15.38 934333 96 143692 792179 15.35 935871 97 144625 791426 15.45 936051 98 147093 795596 15.60 942689 99 144167 796032 15.33 940199 100 144144 792923 15.38 937067 101 143151 793870 15.28 937021 102 143342 793890 15.29 937232 103 143614 792077 15.35 935691 104 143212 794960 15.27 938172 105 141090 796115 15.05 937205 106 143849 797252 15.29 941101 107 143861 795617 15.31 939478 108 143197 795825 15.25 939022 109 143588 796635 15.27 940223 110 143452 795173 15.28 938625 111 143695 798090 15.26 941785 112 143103 795258 15.25 938361 113 141300 792359 15.13 933659 114 142800 793403 15.25 936203 115 143814 794981 15.32 938795 116 143348 794010 15.29 937358 117 142295 794097 15.20 936392 118 143685 794483 15.32 938168 119 142850 790961 15.30 933811 120 139657 794424 14.95 934081 121 141158 792366 15.12 933524 122 141721 793073 15.16 934794 123 140938 794212 15.07 935150 124 140165 792143 15.03 932308 125 140694 790868 15.10 931562 126 141605 794606 15.13 936211 127 142709 794199 15.23 936908 128 141370 790219 15.18 931589 129 140170 790459 15.06 930629 130 140869 790978 15.12 931847 131 141246 789844 15.17 931090 132 139260 789848 14.99 929108 133 141089 791166 15.13 932255 134 140814 789555 15.14 930369 135 141036 787673 15.19 928709 136 140167 788080 15.10 928247 137 139750 785960 15.10 925710 138 140977 787924 15.18 928901 139 140294 788314 15.11 928608 140 142095 786986 15.29 929081 141 140295 785879 15.15 926174 142 139707 785807 15.10 925514 143 140883 786182 15.20 927065 144 140260 786634 15.13 926894 145 140123 789384 15.07 929507 146 141695 789518 15.22 931213 147 141643 787254 15.25 928897 148 141995 787917 15.27 929912 149 141801 785794 15.29 927595 150 140669 785130 15.19 925799 151 144407 785528 15.53 929935 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 19910 1754728 1.12 1774638 2 12656 1209217 1.04 1221873 3 8731 1235715 0.70 1244446 4 7507 1238928 0.60 1246435 5 8509 1431102 0.59 1439611 6 8568 1423708 0.60 1432276 7 7529 1262818 0.59 1270347 8 7081 1303685 0.54 1310766 9 6833 1278165 0.53 1284998 10 6476 1258287 0.51 1264763 11 6394 1278446 0.50 1284840 12 6061 1291904 0.47 1297965 13 5728 1292666 0.44 1298394 14 5634 1280826 0.44 1286460 15 5467 1290759 0.42 1296226 16 5438 1289065 0.42 1294503 17 5260 1287479 0.41 1292739 18 5177 1312660 0.39 1317837 19 5083 1303357 0.39 1308440 20 4798 1290499 0.37 1295297 21 4913 1299332 0.38 1304245 22 4778 1295791 0.37 1300569 23 4780 1289243 0.37 1294023 24 4794 1289531 0.37 1294325 25 4714 1292530 0.36 1297244 26 4561 1288692 0.35 1293253 27 4719 1297873 0.36 1302592 28 4694 1302122 0.36 1306816 29 4537 1295557 0.35 1300094 30 4712 1303152 0.36 1307864 31 4748 1304617 0.36 1309365 32 4659 1305437 0.36 1310096 33 4761 1314508 0.36 1319269 34 4631 1307004 0.35 1311635 35 4747 1299506 0.36 1304253 36 4591 1297553 0.35 1302144 37 4475 1291880 0.35 1296355 38 4597 1287182 0.36 1291779 39 4546 1296078 0.35 1300624 40 4544 1294330 0.35 1298874 41 4615 1289455 0.36 1294070 42 4601 1299133 0.35 1303734 43 4500 1299418 0.35 1303918 44 4638 1297245 0.36 1301883 45 4560 1300737 0.35 1305297 46 4595 1295268 0.35 1299863 47 4719 1294819 0.36 1299538 48 4601 1293719 0.35 1298320 49 4440 1292295 0.34 1296735 50 4592 1290726 0.35 1295318 51 4479 1291158 0.35 1295637 52 4576 1303649 0.35 1308225 53 4590 1298108 0.35 1302698 54 4573 1298152 0.35 1302725 55 4568 1293555 0.35 1298123 56 4469 1291272 0.34 1295741 57 4556 1293705 0.35 1298261 58 4654 1296306 0.36 1300960 59 4554 1298415 0.35 1302969 60 4503 1296351 0.35 1300854 61 4497 1294833 0.35 1299330 62 4585 1291172 0.35 1295757 63 4583 1299355 0.35 1303938 64 4583 1300547 0.35 1305130 65 4541 1296278 0.35 1300819 66 4630 1300054 0.35 1304684 67 4567 1297259 0.35 1301826 68 4574 1289888 0.35 1294462 69 4567 1295106 0.35 1299673 70 4581 1296112 0.35 1300693 71 4498 1290588 0.35 1295086 72 4622 1297468 0.35 1302090 73 4544 1294799 0.35 1299343 74 4609 1292540 0.36 1297149 75 4524 1297845 0.35 1302369 76 4562 1300941 0.35 1305503 77 4448 1293221 0.34 1297669 78 4589 1294710 0.35 1299299 79 4401 1290136 0.34 1294537 80 4606 1291159 0.36 1295765 81 4559 1294126 0.35 1298685 82 4519 1294430 0.35 1298949 83 4509 1289232 0.35 1293741 84 4616 1299325 0.35 1303941 85 4524 1294489 0.35 1299013 86 4618 1292660 0.36 1297278 87 4569 1295511 0.35 1300080 88 4416 1295184 0.34 1299600 89 4322 1291182 0.33 1295504 90 4477 1294596 0.34 1299073 91 4349 1296750 0.33 1301099 92 4459 1288368 0.34 1292827 93 4434 1292765 0.34 1297199 94 4435 1292373 0.34 1296808 95 4346 1288635 0.34 1292981 96 4459 1293593 0.34 1298052 97 4623 1294804 0.36 1299427 98 4457 1296145 0.34 1300602 99 4432 1296599 0.34 1301031 100 4653 1295533 0.36 1300186 101 4562 1290603 0.35 1295165 102 4581 1295315 0.35 1299896 103 4548 1290572 0.35 1295120 104 4381 1293595 0.34 1297976 105 4464 1295896 0.34 1300360 106 4441 1297645 0.34 1302086 107 4547 1293266 0.35 1297813 108 4450 1296816 0.34 1301266 109 4432 1292668 0.34 1297100 110 4566 1290343 0.35 1294909 111 4560 1295570 0.35 1300130 112 4592 1290507 0.35 1295099 113 4598 1288185 0.36 1292783 114 4547 1296399 0.35 1300946 115 4713 1294421 0.36 1299134 116 4660 1291530 0.36 1296190 117 4719 1295137 0.36 1299856 118 4707 1291731 0.36 1296438 119 4772 1288125 0.37 1292897 120 4619 1294829 0.36 1299448 121 4914 1290569 0.38 1295483 122 4891 1287688 0.38 1292579 123 4954 1292051 0.38 1297005 124 4857 1292720 0.37 1297577 125 5034 1289524 0.39 1294558 126 5051 1298665 0.39 1303716 127 5012 1294748 0.39 1299760 128 5288 1293224 0.41 1298512 129 5072 1293979 0.39 1299051 130 5267 1289104 0.41 1294371 131 5429 1285871 0.42 1291300 132 5472 1290621 0.42 1296093 133 5626 1290771 0.43 1296397 134 5737 1288078 0.44 1293815 135 5919 1289578 0.46 1295497 136 6048 1285983 0.47 1292031 137 6139 1284036 0.48 1290175 138 6328 1289145 0.49 1295473 139 6446 1288741 0.50 1295187 140 6764 1285865 0.52 1292629 141 7066 1286835 0.55 1293901 142 7369 1286373 0.57 1293742 143 7684 1282490 0.60 1290174 144 8020 1289072 0.62 1297092 145 8699 1288487 0.67 1297186 146 10105 1284447 0.78 1294552 147 12135 1286518 0.93 1298653 148 13475 1284057 1.04 1297532 149 14950 1281305 1.15 1296255 150 17159 1288852 1.31 1306011 151 17641 1278950 1.36 1296591 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 57269 6596381 0.86 6653650 2 56206 5083950 1.09 5140156 3 32123 5018026 0.64 5050149 4 30420 5601347 0.54 5631767 5 31170 6031266 0.51 6062436 6 30326 6053106 0.50 6083432 7 30002 5748488 0.52 5778490 8 28942 6040029 0.48 6068971 9 28115 6036565 0.46 6064680 10 26718 5990032 0.44 6016750 11 26002 6099718 0.42 6125720 12 24874 6140087 0.40 6164961 13 23926 6113332 0.39 6137258 14 23579 6079148 0.39 6102727 15 23601 6052817 0.39 6076418 16 22992 6048207 0.38 6071199 17 23251 6098625 0.38 6121876 18 22534 6114907 0.37 6137441 19 22405 6108486 0.37 6130891 20 21588 6094890 0.35 6116478 21 21333 6083916 0.35 6105249 22 21190 6099863 0.35 6121053 23 21371 6074722 0.35 6096093 24 21228 6085291 0.35 6106519 25 21212 6098607 0.35 6119819 26 20754 6088365 0.34 6109119 27 20728 6121220 0.34 6141948 28 21019 6117162 0.34 6138181 29 21008 6123685 0.34 6144693 30 21152 6141987 0.34 6163139 31 20966 6142968 0.34 6163934 32 21351 6129510 0.35 6150861 33 21015 6126007 0.34 6147022 34 20839 6109131 0.34 6129970 35 20964 6103882 0.34 6124846 36 20887 6098146 0.34 6119033 37 20937 6098102 0.34 6119039 38 20761 6094730 0.34 6115491 39 20889 6101339 0.34 6122228 40 20924 6119342 0.34 6140266 41 20863 6110340 0.34 6131203 42 20875 6131204 0.34 6152079 43 20621 6105616 0.34 6126237 44 21076 6094699 0.34 6115775 45 20934 6122663 0.34 6143597 46 20952 6115425 0.34 6136377 47 20695 6105369 0.34 6126064 48 20906 6113382 0.34 6134288 49 20957 6106866 0.34 6127823 50 20940 6106704 0.34 6127644 51 20726 6119207 0.34 6139933 52 20859 6126391 0.34 6147250 53 20992 6110431 0.34 6131423 54 21101 6119684 0.34 6140785 55 21027 6117475 0.34 6138502 56 20761 6128407 0.34 6149168 57 20593 6126631 0.33 6147224 58 20884 6128884 0.34 6149768 59 20803 6110339 0.34 6131142 60 20788 6139971 0.34 6160759 61 20681 6131109 0.34 6151790 62 20680 6135201 0.34 6155881 63 20981 6130971 0.34 6151952 64 20988 6130236 0.34 6151224 65 20907 6114803 0.34 6135710 66 20901 6121401 0.34 6142302 67 20637 6112996 0.34 6133633 68 20879 6122941 0.34 6143820 69 20921 6132056 0.34 6152977 70 20765 6120304 0.34 6141069 71 20460 6111047 0.33 6131507 72 20732 6128364 0.34 6149096 73 20561 6125951 0.33 6146512 74 20562 6114132 0.34 6134694 75 20719 6106564 0.34 6127283 76 20840 6113916 0.34 6134756 77 20711 6117070 0.34 6137781 78 20805 6122657 0.34 6143462 79 20546 6130658 0.33 6151204 80 20763 6131350 0.34 6152113 81 20810 6142873 0.34 6163683 82 20629 6134370 0.34 6154999 83 20573 6125314 0.33 6145887 84 20673 6136653 0.34 6157326 85 20758 6126746 0.34 6147504 86 20662 6127215 0.34 6147877 87 20746 6131480 0.34 6152226 88 20777 6129587 0.34 6150364 89 20718 6115984 0.34 6136702 90 20458 6121681 0.33 6142139 91 20520 6116289 0.33 6136809 92 20298 6124001 0.33 6144299 93 20499 6130229 0.33 6150728 94 20519 6120605 0.33 6141124 95 20512 6120110 0.33 6140622 96 20733 6148042 0.34 6168775 97 20849 6142577 0.34 6163426 98 20666 6133295 0.34 6153961 99 20782 6130638 0.34 6151420 100 20706 6125350 0.34 6146056 101 20656 6117917 0.34 6138573 102 20626 6133499 0.34 6154125 103 20739 6130313 0.34 6151052 104 20719 6131786 0.34 6152505 105 21010 6142090 0.34 6163100 106 20574 6124398 0.33 6144972 107 20992 6112047 0.34 6133039 108 20917 6113621 0.34 6134538 109 21207 6107988 0.35 6129195 110 21134 6111519 0.34 6132653 111 21385 6114623 0.35 6136008 112 21654 6124516 0.35 6146170 113 21528 6113976 0.35 6135504 114 21749 6131731 0.35 6153480 115 22086 6127456 0.36 6149542 116 22064 6126628 0.36 6148692 117 22380 6114517 0.36 6136897 118 22321 6114647 0.36 6136968 119 22119 6114150 0.36 6136269 120 22822 6122287 0.37 6145109 121 22990 6118175 0.37 6141165 122 23186 6110900 0.38 6134086 123 23935 6127257 0.39 6151192 124 23777 6115821 0.39 6139598 125 24123 6121600 0.39 6145723 126 24268 6120643 0.39 6144911 127 25047 6109179 0.41 6134226 128 25166 6092480 0.41 6117646 129 25327 6090350 0.41 6115677 130 26006 6100019 0.42 6126025 131 26750 6095458 0.44 6122208 132 27008 6106409 0.44 6133417 133 27873 6105278 0.45 6133151 134 28105 6106186 0.46 6134291 135 29009 6101204 0.47 6130213 136 30213 6088692 0.49 6118905 137 30708 6080056 0.50 6110764 138 31897 6090093 0.52 6121990 139 32983 6091076 0.54 6124059 140 33918 6078792 0.55 6112710 141 35058 6079063 0.57 6114121 142 36920 6082015 0.60 6118935 143 38091 6080706 0.62 6118797 144 40211 6082742 0.66 6122953 145 42560 6080123 0.70 6122683 146 47824 6069017 0.78 6116841 147 53557 6080546 0.87 6134103 148 60654 6089024 0.99 6149678 149 64994 6081274 1.06 6146268 150 70630 6078290 1.15 6148920 151 73635 6056230 1.20 6129865 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1927225 300213 86.52 2227438 2 650775 103425 86.29 754200 3 503367 166700 75.12 670067 4 587615 304032 65.90 891647 5 430041 357809 54.58 787850 6 333427 387053 46.28 720480 7 263491 428141 38.10 691632 8 241770 539529 30.94 781299 9 221005 642145 25.60 863150 10 201215 705728 22.19 906943 11 183570 762314 19.41 945884 12 174039 775587 18.33 949626 13 165563 773311 17.63 938874 14 159130 773103 17.07 932233 15 151909 766738 16.54 918647 16 149829 766367 16.35 916196 17 149669 763177 16.40 912846 18 149628 760046 16.45 909674 19 148540 756338 16.42 904878 20 148117 756033 16.38 904150 21 147713 754503 16.37 902216 22 148170 753185 16.44 901355 23 147647 752876 16.40 900523 24 147196 751912 16.37 899108 25 146875 756066 16.27 902941 26 147469 757880 16.29 905349 27 146827 757835 16.23 904662 28 146268 759684 16.15 905952 29 145832 757692 16.14 903524 30 145562 754200 16.18 899762 31 144682 751769 16.14 896451 32 144419 750424 16.14 894843 33 144100 748637 16.14 892737 34 143752 745830 16.16 889582 35 142407 743190 16.08 885597 36 141503 740397 16.05 881900 37 141320 738805 16.06 880125 38 139931 735822 15.98 875753 39 139249 731376 15.99 870625 40 138664 728383 15.99 867047 41 138215 727214 15.97 865429 42 136908 723864 15.91 860772 43 136688 720987 15.94 857675 44 136596 718979 15.97 855575 45 134857 717017 15.83 851874 46 134723 713703 15.88 848426 47 134040 713224 15.82 847264 48 133608 706971 15.89 840579 49 132772 702900 15.89 835672 50 131414 702538 15.76 833952 51 130021 697078 15.72 827099 52 129071 695146 15.66 824217 53 129191 692398 15.72 821589 54 128531 688709 15.73 817240 55 126704 686856 15.57 813560 56 126529 682781 15.63 809310 57 126475 678887 15.70 805362 58 125936 673066 15.76 799002 59 124391 671745 15.62 796136 60 123126 667842 15.57 790968 61 122835 665690 15.58 788525 62 121623 661515 15.53 783138 63 121328 658432 15.56 779760 64 120331 654498 15.53 774829 65 119574 649959 15.54 769533 66 117659 644955 15.43 762614 67 117543 642303 15.47 759846 68 116689 638875 15.44 755564 69 115891 634317 15.45 750208 70 115554 630558 15.49 746112 71 114970 628224 15.47 743194 72 113796 622978 15.45 736774 73 112706 619987 15.38 732693 74 112720 614872 15.49 727592 75 111730 611587 15.45 723317 76 110732 607602 15.42 718334 77 109718 602809 15.40 712527 78 109678 600048 15.45 709726 79 108244 597504 15.34 705748 80 108487 591782 15.49 700269 81 107565 587379 15.48 694944 82 106190 582472 15.42 688662 83 105656 578095 15.45 683751 84 104616 574890 15.40 679506 85 103626 569632 15.39 673258 86 102137 565468 15.30 667605 87 101846 561533 15.35 663379 88 100993 555473 15.38 656466 89 100217 552352 15.36 652569 90 99033 548538 15.29 647571 91 97977 544068 15.26 642045 92 98134 541165 15.35 639299 93 97017 537997 15.28 635014 94 96248 532898 15.30 629146 95 94930 527967 15.24 622897 96 94283 523856 15.25 618139 97 93912 519303 15.31 613215 98 91987 513443 15.19 605430 99 91307 508842 15.21 600149 100 90551 505992 15.18 596543 101 90191 501377 15.25 591568 102 88825 494608 15.22 583433 103 87730 490793 15.16 578523 104 86491 487118 15.08 573609 105 85255 483700 14.98 568955 106 84621 478216 15.03 562837 107 83548 474365 14.98 557913 108 82885 468938 15.02 551823 109 82195 464669 15.03 546864 110 81122 460606 14.97 541728 111 80426 456547 14.98 536973 112 79183 451886 14.91 531069 113 78331 448100 14.88 526431 114 77005 442214 14.83 519219 115 77075 438406 14.95 515481 116 75604 434581 14.82 510185 117 75089 431490 14.82 506579 118 74103 427278 14.78 501381 119 73157 421720 14.78 494877 120 72267 418278 14.73 490545 121 71452 414110 14.72 485562 122 71062 410207 14.77 481269 123 70503 406721 14.77 477224 124 69701 403193 14.74 472894 125 68169 399110 14.59 467279 126 66839 393508 14.52 460347 127 65881 389519 14.47 455400 128 66161 385092 14.66 451253 129 64775 381441 14.52 446216 130 64387 378524 14.54 442911 131 63580 372878 14.57 436458 132 62934 369293 14.56 432227 133 61625 365987 14.41 427612 134 60894 361856 14.40 422750 135 60129 358087 14.38 418216 136 59221 353839 14.34 413060 137 58406 349962 14.30 408368 138 57697 345431 14.31 403128 139 56676 342479 14.20 399155 140 56387 336134 14.37 392521 141 55410 334893 14.20 390303 142 54490 329361 14.20 383851 143 54080 325075 14.26 379155 144 53077 322479 14.13 375556 145 53083 318656 14.28 371739 146 51722 314859 14.11 366581 147 51317 311388 14.15 362705 148 51023 307414 14.23 358437 149 50357 305885 14.14 356242 150 49236 301333 14.04 350569 151 48018 297023 13.92 345041 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2369663 371439 86.45 2741102 2 2210041 392406 84.92 2602447 3 598379 183697 76.51 782076 4 598929 310913 65.83 909842 5 559982 503244 52.67 1063226 6 384951 504316 43.29 889267 7 300795 554551 35.17 855346 8 210815 805735 20.74 1016550 9 156717 988118 13.69 1144835 10 109059 1149199 8.67 1258258 11 75503 1259599 5.66 1335102 12 50147 1294162 3.73 1344309 13 33724 1288742 2.55 1322466 14 21995 1277293 1.69 1299288 15 14546 1267651 1.13 1282197 16 10864 1254482 0.86 1265346 17 8963 1246033 0.71 1254996 18 7430 1238152 0.60 1245582 19 7243 1230423 0.59 1237666 20 6704 1226989 0.54 1233693 21 6381 1223100 0.52 1229481 22 6741 1219649 0.55 1226390 23 6210 1219442 0.51 1225652 24 5657 1216151 0.46 1221808 25 5775 1216618 0.47 1222393 26 5609 1216820 0.46 1222429 27 5452 1220001 0.44 1225453 28 5907 1220364 0.48 1226271 29 5193 1223507 0.42 1228700 30 5116 1221213 0.42 1226329 31 4936 1218200 0.40 1223136 32 4927 1216848 0.40 1221775 33 4775 1212916 0.39 1217691 34 4750 1208853 0.39 1213603 35 4658 1207184 0.38 1211842 36 4547 1201879 0.38 1206426 37 4566 1200053 0.38 1204619 38 4560 1198721 0.38 1203281 39 4398 1195492 0.37 1199890 40 4371 1189039 0.37 1193410 41 4364 1182401 0.37 1186765 42 4252 1180367 0.36 1184619 43 4241 1174669 0.36 1178910 44 4226 1171640 0.36 1175866 45 4100 1168589 0.35 1172689 46 4156 1164755 0.36 1168911 47 4101 1160863 0.35 1164964 48 4175 1157066 0.36 1161241 49 4178 1149481 0.36 1153659 50 4063 1146372 0.35 1150435 51 4063 1142422 0.35 1146485 52 4017 1135763 0.35 1139780 53 3986 1132967 0.35 1136953 54 4083 1128858 0.36 1132941 55 4076 1121458 0.36 1125534 56 3899 1118302 0.35 1122201 57 3838 1115859 0.34 1119697 58 3840 1107934 0.35 1111774 59 3887 1101488 0.35 1105375 60 3921 1094813 0.36 1098734 61 3707 1089372 0.34 1093079 62 3835 1082515 0.35 1086350 63 3756 1075677 0.35 1079433 64 3705 1069963 0.35 1073668 65 3754 1064465 0.35 1068219 66 3853 1057133 0.36 1060986 67 3708 1050641 0.35 1054349 68 3653 1045015 0.35 1048668 69 3725 1040386 0.36 1044111 70 3629 1029609 0.35 1033238 71 3599 1026315 0.35 1029914 72 3609 1021956 0.35 1025565 73 3565 1013590 0.35 1017155 74 3541 1007582 0.35 1011123 75 3527 1001065 0.35 1004592 76 3550 995468 0.36 999018 77 3418 989184 0.34 992602 78 3496 983739 0.35 987235 79 3441 975582 0.35 979023 80 3430 967434 0.35 970864 81 3446 961991 0.36 965437 82 3409 955947 0.36 959356 83 3429 947414 0.36 950843 84 3366 939041 0.36 942407 85 3261 932125 0.35 935386 86 3339 925035 0.36 928374 87 3249 915830 0.35 919079 88 3061 911152 0.33 914213 89 3069 902815 0.34 905884 90 3118 898113 0.35 901231 91 3073 889763 0.34 892836 92 3225 884087 0.36 887312 93 3131 876559 0.36 879690 94 2942 869196 0.34 872138 95 3074 860032 0.36 863106 96 3046 853468 0.36 856514 97 2972 847575 0.35 850547 98 2966 839803 0.35 842769 99 3029 831782 0.36 834811 100 2782 824474 0.34 827256 101 2902 819971 0.35 822873 102 2835 812189 0.35 815024 103 2777 803908 0.34 806685 104 2685 796653 0.34 799338 105 2791 789952 0.35 792743 106 2728 780952 0.35 783680 107 2691 774029 0.35 776720 108 2737 767518 0.36 770255 109 2726 759081 0.36 761807 110 2640 753671 0.35 756311 111 2626 746911 0.35 749537 112 2628 739303 0.35 741931 113 2559 731861 0.35 734420 114 2577 724303 0.35 726880 115 2527 716609 0.35 719136 116 2417 707915 0.34 710332 117 2495 701415 0.35 703910 118 2531 695672 0.36 698203 119 2454 688506 0.36 690960 120 2443 678443 0.36 680886 121 2354 671964 0.35 674318 122 2425 666522 0.36 668947 123 2429 659759 0.37 662188 124 2264 652062 0.35 654326 125 2337 644154 0.36 646491 126 2214 636778 0.35 638992 127 2191 628350 0.35 630541 128 2177 622642 0.35 624819 129 2134 615685 0.35 617819 130 2233 609802 0.36 612035 131 2120 603507 0.35 605627 132 1959 597742 0.33 599701 133 2125 589753 0.36 591878 134 1991 583170 0.34 585161 135 2109 575888 0.36 577997 136 1997 568809 0.35 570806 137 2048 562766 0.36 564814 138 1989 555900 0.36 557889 139 1940 548948 0.35 550888 140 1960 542630 0.36 544590 141 2002 536828 0.37 538830 142 1949 528525 0.37 530474 143 1856 523355 0.35 525211 144 1850 517540 0.36 519390 145 1905 511033 0.37 512938 146 1857 504419 0.37 506276 147 1895 497480 0.38 499375 148 1929 493705 0.39 495634 149 1956 485776 0.40 487732 150 1921 481640 0.40 483561 151 2013 471776 0.42 473789 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7941032 1228966 86.60 9169998 2 6733547 1156592 85.34 7890139 3 5823902 2097992 73.52 7921894 4 4971399 2745227 64.42 7716626 5 3589350 3280856 52.25 6870206 6 2740645 3533911 43.68 6274556 7 2023738 3518412 36.52 5542150 8 1483465 3711437 28.56 5194902 9 1053407 4052634 20.63 5106041 10 726073 4390381 14.19 5116454 11 479180 4889461 8.93 5368641 12 314140 5182371 5.72 5496511 13 200827 5377116 3.60 5577943 14 128019 5536257 2.26 5664276 15 83532 5666192 1.45 5749724 16 58428 5758405 1.00 5816833 17 45317 5824959 0.77 5870276 18 37342 5862137 0.63 5899479 19 33326 5885605 0.56 5918931 20 30846 5891227 0.52 5922073 21 30134 5890242 0.51 5920376 22 29889 5878848 0.51 5908737 23 30446 5868527 0.52 5898973 24 29535 5849160 0.50 5878695 25 29062 5825833 0.50 5854895 26 28345 5809501 0.49 5837846 27 27466 5797439 0.47 5824905 28 26620 5789171 0.46 5815791 29 26195 5785583 0.45 5811778 30 25461 5778000 0.44 5803461 31 24590 5766344 0.42 5790934 32 23912 5758204 0.41 5782116 33 22702 5739411 0.39 5762113 34 22504 5722671 0.39 5745175 35 21999 5713239 0.38 5735238 36 21070 5693744 0.37 5714814 37 20987 5672251 0.37 5693238 38 20516 5663551 0.36 5684067 39 20366 5650199 0.36 5670565 40 20014 5632989 0.35 5653003 41 19588 5618636 0.35 5638224 42 19752 5597839 0.35 5617591 43 19401 5579218 0.35 5598619 44 19370 5563721 0.35 5583091 45 19294 5542771 0.35 5562065 46 19190 5525297 0.35 5544487 47 19076 5507937 0.35 5527013 48 19005 5484507 0.35 5503512 49 18943 5462588 0.35 5481531 50 18473 5439595 0.34 5458068 51 18580 5419262 0.34 5437842 52 18746 5391095 0.35 5409841 53 18485 5369716 0.34 5388201 54 18287 5338879 0.34 5357166 55 18216 5314827 0.34 5333043 56 18110 5285517 0.34 5303627 57 17867 5256671 0.34 5274538 58 17701 5224646 0.34 5242347 59 17725 5197931 0.34 5215656 60 17579 5174761 0.34 5192340 61 17645 5149846 0.34 5167491 62 17705 5118195 0.34 5135900 63 17258 5089985 0.34 5107243 64 17190 5063157 0.34 5080347 65 16993 5034229 0.34 5051222 66 16982 5002970 0.34 5019952 67 16803 4972434 0.34 4989237 68 16782 4946984 0.34 4963766 69 16845 4913640 0.34 4930485 70 16694 4879054 0.34 4895748 71 16707 4852245 0.34 4868952 72 16574 4826166 0.34 4842740 73 16107 4795364 0.33 4811471 74 16325 4766050 0.34 4782375 75 15913 4739339 0.33 4755252 76 16051 4704006 0.34 4720057 77 15838 4669972 0.34 4685810 78 15756 4639018 0.34 4654774 79 15885 4601193 0.34 4617078 80 15709 4569587 0.34 4585296 81 15585 4533563 0.34 4549148 82 15223 4497406 0.34 4512629 83 15040 4463419 0.34 4478459 84 15149 4431570 0.34 4446719 85 14919 4400119 0.34 4415038 86 14551 4367547 0.33 4382098 87 14752 4331377 0.34 4346129 88 14776 4294114 0.34 4308890 89 14321 4266810 0.33 4281131 90 14158 4231444 0.33 4245602 91 13967 4201343 0.33 4215310 92 14319 4171015 0.34 4185334 93 14089 4134452 0.34 4148541 94 13904 4102296 0.34 4116200 95 13701 4068698 0.34 4082399 96 13623 4033772 0.34 4047395 97 13465 3996364 0.34 4009829 98 13419 3964207 0.34 3977626 99 13280 3927297 0.34 3940577 100 13115 3892392 0.34 3905507 101 13082 3858557 0.34 3871639 102 12935 3827691 0.34 3840626 103 12818 3791077 0.34 3803895 104 12584 3759606 0.33 3772190 105 12630 3725557 0.34 3738187 106 12519 3689547 0.34 3702066 107 12189 3656029 0.33 3668218 108 12207 3621333 0.34 3633540 109 11990 3590713 0.33 3602703 110 11796 3560210 0.33 3572006 111 11850 3522217 0.34 3534067 112 11728 3489750 0.33 3501478 113 11480 3456302 0.33 3467782 114 11357 3423869 0.33 3435226 115 11185 3387469 0.33 3398654 116 11297 3354012 0.34 3365309 117 11085 3327586 0.33 3338671 118 11082 3290893 0.34 3301975 119 10880 3264001 0.33 3274881 120 10803 3227836 0.33 3238639 121 10709 3191308 0.33 3202017 122 10724 3162903 0.34 3173627 123 10390 3128243 0.33 3138633 124 10540 3096151 0.34 3106691 125 10175 3059115 0.33 3069290 126 10278 3023151 0.34 3033429 127 9947 2989058 0.33 2999005 128 9911 2957613 0.33 2967524 129 9829 2926619 0.33 2936448 130 9597 2895767 0.33 2905364 131 9426 2864380 0.33 2873806 132 9322 2833623 0.33 2842945 133 9528 2799992 0.34 2809520 134 9327 2768519 0.34 2777846 135 9234 2738561 0.34 2747795 136 9159 2705869 0.34 2715028 137 8968 2675175 0.33 2684143 138 8957 2645804 0.34 2654761 139 8760 2614143 0.33 2622903 140 8978 2586716 0.35 2595694 141 8871 2553971 0.35 2562842 142 8684 2524000 0.34 2532684 143 8505 2493422 0.34 2501927 144 8497 2462129 0.34 2470626 145 8477 2432722 0.35 2441199 146 8552 2406558 0.35 2415110 147 8432 2373118 0.35 2381550 148 8374 2350869 0.35 2359243 149 8559 2322331 0.37 2330890 150 8705 2296945 0.38 2305650 151 9513 2260734 0.42 2270247