![[ICO]](/icons/blank.gif){kind=icon}
![[PARENTDIR]](/icons/back.gif){kind=icon}
![[TXT]](/icons/text.gif){kind=icon}
![[ ]](/icons/unknown.gif){kind=icon}
![[DIR]](/icons/folder.gif){kind=icon}
![[ ]](/icons/script.gif){kind=icon}
![[ ]](/icons/p.gif){kind=icon}
| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| 01-genome.html | 2025-07-21 11:42 | 16K | |
| 01-genome.qmd | 2025-08-09 14:42 | 1.9K | |
| 01-genome_files/ | 2025-07-21 11:42 | - | |
| 02-gallo-align.qmd | 2025-07-30 15:51 | 4.5K | |
| 03-Mchi-align.Rmd | 2025-08-09 14:42 | 739 | |
| 04-fastqc.Rmd | 2025-07-28 13:17 | 207 | |
| 05-genome-prep-klone..> | 2025-08-09 14:42 | 285 | |
| 06-bismark.job | 2025-08-09 14:42 | 1.1K | |
| 06-bismark.sh | 2025-08-09 14:42 | 897 | |
| 06.1-bismark.sh | 2025-08-09 14:42 | 612 | |
| 06.2.sh | 2025-08-09 14:42 | 749 | |
| 07-bismark.job | 2025-08-09 14:42 | 1.1K | |
| 07.sh | 2025-08-09 14:42 | 1.4K | |
| 08-bismark.job | 2025-08-09 14:42 | 1.1K | |
| 08.sh | 2025-08-09 14:42 | 1.4K | |
| 09-bismark-post-alig..> | 2025-08-11 18:58 | 2.4K | |
| 10-nextflow.Rmd | 2025-08-09 14:42 | 247 | |
| 10.config | 2025-08-09 14:42 | 1.7K | |
| 10.nextflow | 2025-08-09 14:42 | 479 | |
| 10.samplesheet.csv | 2025-08-09 14:42 | 1.1K | |
| 11.config | 2025-08-09 14:42 | 1.8K | |
| 11.nextflow | 2025-08-09 14:42 | 492 | |
| 11.notes | 2025-08-09 14:42 | 255 | |
| 11.samplesheet.csv | 2025-08-09 14:42 | 1.1K | |
| 12.config | 2025-08-09 14:42 | 1.8K | |
| 12.nextflow | 2025-08-09 14:42 | 492 | |
| 13-DSS.Rmd | 2025-08-09 15:16 | 3.3K | |
| 14-CG-illumina.Rmd | 2025-08-15 11:15 | 2.6K | |
| 14-methylkit.Rmd | 2025-08-12 15:11 | 2.7K | |
| 15-analyze_dml_mappi..> | 2025-08-12 22:32 | 7.0K | |
| 15-extract_gene_name..> | 2025-08-12 22:42 | 6.1K | |
| 15-functional_analys..> | 2025-08-12 22:50 | 12K | |
| 15-map_dmls_to_genom..> | 2025-08-12 22:32 | 6.9K | |
| DML_all_q0.05_diff25..> | 2025-08-11 18:34 | 399K | |
| methylDB_2025-08-10_..> | 2025-08-10 16:00 | - | |
| methylDB_2025-08-10_..> | 2025-08-10 16:01 | - | |
| work/ | 2025-08-08 17:04 | - | |