Nextflow workflow report

[scruffy_northcutt]

Run times

31-Aug-2025 07:21:51 - 31-Aug-2025 10:24:34 (duration: 3h 2m 44s)

  57 succeeded  

  0 cached  

  0 ignored  

  0 failed (0 retries)  

Nextflow command

nextflow run nf-core/methylseq -c /mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/code/07.config --input /mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/code/07.samplesheet.csv --outdir /mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/output/07-nextflow --fasta /mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/data/GCA_013387185.1_ASM1338718v1_genomic.fa --clip_r1 15 --clip_r2 25 --three_prime_clip_r1 10 --three_prime_clip_r2 10 --quality 25 --length 30 --stringency 3 -resume -with-trace -with-report nf_report.html -with-timeline nf_timeline.html --nomeseq

CPU-Hours

426.7

Launch directory

/mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/output/07-nextflow

Work directory

/mmfs1/gscratch/scrubbed/sr320/github/project-caligus-methylation/output/07-nextflow/work

Project directory

/mmfs1/gscratch/scrubbed/sr320/.nextflow/assets/nf-core/methylseq

Script name

main.nf

Script ID

4bbfa1f34a4770804c3fb5f101c38c48

Workflow session

e3c69dd9-e080-4e03-9316-14c0eb9e44af

Workflow repository

https://github.com/nf-core/methylseq, revision master (commit hash db60bfe1f0d0409244a02c6b046301ebfd697db7)

Workflow profile

standard

Nextflow version

version 25.04.6, build 5954 (01-07-2025 11:27 UTC)