FastQCFastQC Report
Sat 30 Aug 2025
Caligus_Male_3_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCaligus_Male_3_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56000000
Total Bases8.2 Gbp
Sequences flagged as poor quality0
Sequence length1-149
%GC18

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1144520.2043785714285714No Hit
AAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG723440.12918571428571426No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)