File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
Caligus_Female_33.Caligus_Female_33_1_val_1_bismark_bt2_pe.bam	54214326	28170803	20315711	5727808	4	1597985	26572818	1001946389	3082420	125127605	3264468	122662178	20344871	727464847
Caligus_Female_22.Caligus_Female_22_1_val_1_bismark_bt2_pe.bam	54214452	28169869	20316007	5728573	3	1597815	26572054	1001932142	3080923	125121414	3263377	122673158	20343631	727449639
Caligus_Female_11.Caligus_Female_11_1_val_1_bismark_bt2_pe.bam	54215300	28172186	20316089	5727021	4	1598917	26573269	1001920320	3079952	125108097	3263061	122658665	20345901	727464644