COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/WB_17a.markdup.txt - output/05_realign_xbOstLuri2/alignments/WB_17a.sorted.bam.part READ: 65919210 WRITTEN: 65919210 EXCLUDED: 4179488 EXAMINED: 61739722 PAIRED: 61302454 SINGLE: 437268 DUPLICATE PAIR: 13047710 DUPLICATE SINGLE: 168359 DUPLICATE PAIR OPTICAL: 0 DUPLICATE SINGLE OPTICAL: 0 DUPLICATE NON PRIMARY: 0 DUPLICATE NON PRIMARY OPTICAL: 0 DUPLICATE PRIMARY TOTAL: 13216069 DUPLICATE TOTAL: 13216069 ESTIMATED_LIBRARY_SIZE: 61377204