COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/WB_15a.markdup.txt - output/05_realign_xbOstLuri2/alignments/WB_15a.sorted.bam.part READ: 71953799 WRITTEN: 71953799 EXCLUDED: 4450378 EXAMINED: 67503421 PAIRED: 67049620 SINGLE: 453801 DUPLICATE PAIR: 14444052 DUPLICATE SINGLE: 179183 DUPLICATE PAIR OPTICAL: 0 DUPLICATE SINGLE OPTICAL: 0 DUPLICATE NON PRIMARY: 0 DUPLICATE NON PRIMARY OPTICAL: 0 DUPLICATE PRIMARY TOTAL: 14623235 DUPLICATE TOTAL: 14623235 ESTIMATED_LIBRARY_SIZE: 66181322