COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/WB_13a.markdup.txt - output/05_realign_xbOstLuri2/alignments/WB_13a.sorted.bam.part READ: 76511699 WRITTEN: 76511699 EXCLUDED: 4784688 EXAMINED: 71727011 PAIRED: 71225098 SINGLE: 501913 DUPLICATE PAIR: 15798580 DUPLICATE SINGLE: 203652 DUPLICATE PAIR OPTICAL: 0 DUPLICATE SINGLE OPTICAL: 0 DUPLICATE NON PRIMARY: 0 DUPLICATE NON PRIMARY OPTICAL: 0 DUPLICATE PRIMARY TOTAL: 16002232 DUPLICATE TOTAL: 16002232 ESTIMATED_LIBRARY_SIZE: 67905618