COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/WB_12a.markdup.txt - output/05_realign_xbOstLuri2/alignments/WB_12a.sorted.bam.part READ: 66120806 WRITTEN: 66120806 EXCLUDED: 4280024 EXAMINED: 61840782 PAIRED: 61424742 SINGLE: 416040 DUPLICATE PAIR: 11366942 DUPLICATE SINGLE: 151711 DUPLICATE PAIR OPTICAL: 0 DUPLICATE SINGLE OPTICAL: 0 DUPLICATE NON PRIMARY: 0 DUPLICATE NON PRIMARY OPTICAL: 0 DUPLICATE PRIMARY TOTAL: 11518653 DUPLICATE TOTAL: 11518653 ESTIMATED_LIBRARY_SIZE: 72393009